LOCUS       DANLZQ010000001        82370 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.001, whole genome shotgun sequence.
ACCESSION   DANLZQ010000001 DANLZQ010000000
VERSION     DANLZQ010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 82370)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 82370)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..82370
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.001"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(194..1312)
                     /gene="malK"
                     /locus_tag="PXE50_000001"
     CDS             complement(194..1312)
                     /gene="malK"
                     /locus_tag="PXE50_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005552148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose/maltodextrin ABC transporter ATP-binding
                     protein MalK"
                     /protein_id="HDL5620947.1"
                     /translation="MANVSLRNVGKSYGDVHISKDINLEINEGEFVVFVGPSGCGKST
                     LLRMIAGLEDITTGELYIGGKLMNEVEPSKRGIGMVFQSYALYPHLDVAENMSFGLKL
                     AGVSKAERDQRVNQVAEILQLAHLLDRKPKALSGGQRQRVAIGRTLVSQPEVFLLDEP
                     LSNLDAALRVQMRVEISKLHKKLNRTMIYVTHDQVEAMTLADKIVVLNAGGIAQVGKP
                     LELYHYPANRFVAGFIGSPKMNFLPVKVIAVEPERVKIELPDANHHNFWIPVSGEGVN
                     VGDNLSLGIRPEHLVPSDQTQVTLHGIVQVVELLGNETQIHLEIPEIKQPTLIYRQND
                     VVLVNEGDDLNIGILPERCHLFKEDGTACKRLFVEKGV"
     gene            1733..2923
                     /gene="malE"
                     /locus_tag="PXE50_000002"
     CDS             1733..2923
                     /gene="malE"
                     /locus_tag="PXE50_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005537801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose/maltodextrin ABC transporter
                     substrate-binding protein MalE"
                     /protein_id="HDL5620948.1"
                     /translation="MKNKCVKFTLATLATLVLSGTVMAKMTEGKLVIWINGDKGYNGL
                     AEVGKKFEKDTGVQVLVEHPDRLEEKFAQVASTGDGPDIMFWAHDRFGGYAQSGLLAE
                     VNVSKEFKDKFVDFAWDAETYNGKIIGYPVAIEAISLIYNKDLVKEAPKSWEEIIELD
                     KKLKKEGKNAIMWNLSEPYFTWPIAASNGAYAFKFANGKYDPKDIGVNNEGAVKALQF
                     VVDMVKNKHISADMDYAVAEASFNKGQSALTINGPWSWGNIDKSGIKYGVTLLPTLNG
                     QASKPFVGVLSAGVNSSSPNKDLAKEFLENYLLTDDGLDAVNKDKPLGAVALKSYQEK
                     LAADPRIAATMANAKNGEIMPNIPQMSSFWYAEKSAINNAVTGRQSVKEALDDAHSRI
                     QKQQ"
     gene            3042..4580
                     /gene="malF"
                     /locus_tag="PXE50_000003"
     CDS             3042..4580
                     /gene="malF"
                     /locus_tag="PXE50_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose ABC transporter permease MalF"
                     /protein_id="HDL5620949.1"
                     /translation="MLTQTQSKSTHWLKYLLAGLVLLLDFYLVVLMYSQGEYLFAILT
                     LIILTSGVYIFTNKNTYAWRYVYPGITGMAIFILFPLVATIAIAFTNYSGSNQLSFER
                     AVSVLTEQRYFAGDKYQFTLYPQADNKYQIALTNPTTEQTFVSEPISLATGTNVVVTE
                     QNRPTGEVAPLKVITQNRAALQSMKVVLPNNNELTMSSLRQFSEQKPRYQFDEENKIL
                     LNNETGKRYQANDETGFFQSIDENGHWQSETLEPGYTVTSGFNNFIKIFTDEGIQKPF
                     VQIFIWTVIFSLLTVVFTVILGMVLACLVQWEALKGKAVYRVLLILPYAVPSFISILI
                     FKGLFNQSFGEINMILNQLFGISPEWFNDPLLAKVMILIVNTWLGYPYMMILCMGLLK
                     AIPADLYEASAMDGASTWQNFSKITFPLLLKPLTPLMIASFAFNFNNFVLIQLLTNGR
                     PDMIGTTTPAGYTDLLVSYTYRIAFEGSGTQDFGLAAAIATIIFLLVGGLALLNIKAT
                     KMEL"
     gene            4633..5523
                     /gene="malG"
                     /locus_tag="PXE50_000004"
     CDS             4633..5523
                     /gene="malG"
                     /locus_tag="PXE50_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001252048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose ABC transporter permease MalG"
                     /protein_id="HDL5620950.1"
                     /translation="MAIVQSKSVRYRVWATHFILICFLALIIFPLLMVIGISLRPGNL
                     AIGDIIPSQISWEHWQAALGFDVTHADGTVTPPPFPVLRWLWNSIKVATITSIGIVTL
                     STTCAYAFARMKFKGKKTILQGMLIFQMFPAVLSLVALYALFDRLGQYVPFLGLNTHG
                     GVIFAYLGGIALHVWTIKGYFETIDGSLEEAASLDGATPWQAFRLILLPLSVPILAVV
                     FILSFIAAITEVPVASLLLRDVNSYTLAVGMQQYLYPQNYLWGDFAAAAVLSAIPITL
                     VFLLAQRWLIGGLTAGGVKG"
     gene            5598..7655
                     /locus_tag="PXE50_000005"
     CDS             5598..7655
                     /locus_tag="PXE50_000005"
                     /EC_number="3.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HDL5620951.1"
                     /translation="MKNALPYLCLFYTSSLFAQSWQHSHFSDFNDDLEKHFFQSQVQL
                     EKGSYPLRFKFGEQCYQPQQAIKLNQSVALVPCINEAPQLRLFRQGNYLAQIDLRSGT
                     PTPTISVEQQLQHNEAMFQSCPNWDKKPIEIDVSSTFAEGESVSDFYSGNTAIVKNGK
                     VTLMPNENASGLILLEKSNTENTATFDWKNATVYFVLTDRFYNGDPTNDHSYHRQKDG
                     MQEIGTFHGGDLKGLTEKLDYLQQLGVNVLWISSPLEQMHGWVGGGDKGDFPHYGYHG
                     YYHLDWTKLDANMGTEDDLSRFVQQAHQRGIRVLFDVVMNHTGYATLADMQEFNFGGF
                     YLTPDEISRTLGEKWTHWKPKSGQNWHSFNDFIRFNDNQAWQNWWGKEWVRADIADYD
                     SPKFDDLKMSLAALPDLKTESEQAVKLPEFFANKNTNAKTLPNAKVRDYLIGWLSDWV
                     RKYGIDGFRVDTAKHVEKSTWLVLKQSAQQALNEWQKANPNAGFNDRFWMTGEAWGHG
                     VFKSDYYQNGFDAMINFDFQDQAKQGLNCFAHIEPIYAEMNRKLSDFNVLSYLSSHDT
                     RLFFHSDSEQNIEKHKTAANLLLLSPGAVQIYYGDESGRTFGATGSDLIQGTRSDMNW
                     QELQQDPQKQALHQHWQKLTQFRQRHPAIGAGVHQLIKNDSYFAFKRVLNEDKVMVVW
                     AGN"
     gene            complement(7769..10495)
                     /gene="malT"
                     /locus_tag="PXE50_000006"
     CDS             complement(7769..10495)
                     /gene="malT"
                     /locus_tag="PXE50_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MalT"
                     /protein_id="HDL5620952.1"
                     /translation="MLIPSKLVCSFRLQNSIPRKRLIQELDKSCSYPVVLINAPAGYG
                     KTTLVSQWIENKKNIGWYALDEGDNNSDRFATYFSAALHSAINEEIDVLLEENRKANL
                     LALFNQLLIKAAAFSEHFYLAIDDYHIIENDEIHEALKYWIKHQPSNMTLILISRSIP
                     PLSIASLRVQEQLLEIDINQLMFDHQESTAFFQARLGSELNQQDVIALCNEVEGWPTA
                     LQLISLFAKNKSHTLQVPLQDIAKRLAKSNHFHINEYLADEVLNKVDEETRLFILRCS
                     VLHSMNESLVQAVTGEQNSRTKLESLEKQGLFLQQMANSKWQSSDDSWWKFHPLFASF
                     LNLCCQNELYAELPQLHQKAANAWLQLGYVTEALHHAMQLSDTGLLLNILSKHAWTVF
                     HQGELKLLEESLNCLDYAHLTEHTNLVLLKAWLVQSQHRHIEVGGILADFSRALTENK
                     IELSKTANAEFNVLRAQVAINSGDENTALQLASEALNDLSENAYYAHIVATSIIGEAH
                     HCHGNLAEALAMLQKAERMARQHHTYHNILWSQLQQSEILLAQGFSQAAYEMLDKASE
                     FVKENHLQKVPMYEFLLRSKGKILWEWYNLDKAESMAVAGMNALSKFEDKLQCLTLLT
                     KISLARGNLDNTARLLGEVEQLEHSHSYHHDWIANADQVRIFYWQMTNDVSAVRNWLI
                     QNPSPVSDKNHFTQVQWRNIARSRILLEEYHEAKAILDNLIETAEKFSLISDLNRALI
                     VRNRLYFLQGEKELAQQDLIQALKLTRQTNFISAFVIEGDVMAQQIRHLLQLNVLDEL
                     VLHKAQFILRNINQFYRQKFAHFDENFVNQLLKNPKVPELLKISPLTQREWQVLGLIY
                     SGYSNEQISDELQVAATTIKTHIRNLYQKIGVTNRNEAISYTKELLMLMGYH"
     gene            10659..13028
                     /gene="malP"
                     /locus_tag="PXE50_000007"
     CDS             10659..13028
                     /gene="malP"
                     /locus_tag="PXE50_000007"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltodextrin phosphorylase"
                     /protein_id="HDL5620953.1"
                     /translation="MTFNSIVEKYCRYFDVTDPKHFTLQQWYQVVAEGSLELIYSQPA
                     TKPTESRHVNYLSMEFLIGRLTGNNLMNLGYYEQIRDYLKQYQVELVDVLEQERDPAL
                     GNGGLGRLAACFLDSMATVGQNATGYGLHYQYGLFKQSFKEGMQKEAADTWARDSYPW
                     HRFNPSKTRHIGFGGKIKHIQADQYEWQPKLTIQGKAFDLPIVGYKNNIIQPLRLWQA
                     DSDQSFDFDAFNEGKFLSADKTIVNAAALTQVLYPNDNHQAGQKLRLMQQYFHCACSV
                     ADILDRHISEGYSLEDLAKRQVIQLNDTHPTLAIPELMRVLLDEHQFTWEQAWDICSN
                     TFAYTNHTLLPEALEQWDQRLFKQLLPRHYQIVEKINDIFHDKVQAEFGDDAKIWEKL
                     AVLFDYRVRMANLCVVTCFRVNGVAEIHSDLLVTDLFPEYHKLFPTKFCNVTNGITPR
                     RWIRQANPQLSDLLDRTLKQDWTHNLELLKGVEQYADDTGFREEYQRIKRNNKVVLAN
                     EIHKTLGLNVNPNAIFDVQIKRFHEYKRQHLNLLNIIATYQSLKANPNQDYTPRLFLF
                     SGKAAPGYYLAKNIIHAINNVADIINNDKQVNDRLQVAFLPDYRVSLAEKIIPAADVS
                     EQISMAGKEASGTGNMKLALNGALTLGTLDGANVEIADMVGEENVFIFGHTVESVREL
                     LAKGYQPKAYYNQDPILKNAVDFLATGKASNGDKEAFKLMLDSLLERDPFLVFADFDS
                     YRQAQEKIGVAYLDQETWLRSAILNTARLGAFSSDRSIKDYQQRIWLNR"
     gene            13110..15188
                     /gene="malQ"
                     /locus_tag="PXE50_000008"
     CDS             13110..15188
                     /gene="malQ"
                     /locus_tag="PXE50_000008"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HDL5620954.1"
                     /translation="MKITAKQYYRAGIMPYFFDERGVKKTASEKIKHSLFKAFNGNTQ
                     ARETPIPTVNIFYQHQPCFLPFHLADKKHPLTGTWQLQLENSNQIISGKIKARGITLP
                     QDLPLGYHQLQLKTVDKTFNCTIIIAPERCYQPQAVIEQKRLWGTFLQLYTLKSAHNW
                     GIGDFGDLKDFIQQIAPYQADFIGLNPIHSLFPANPNSASPYSPSSRRWLNIAYIDIN
                     QLAEFQQSDEAQTWFHSAEIQQQLSELRTQDWLNYEQIIPLKLKGLRFAFAKFQQNMT
                     ACAAPAFIEFVQKGGESLQVQATFDALHQHLSAQFADQWGWDFWEKAYQDYHSAAVQQ
                     FRETHKTDIEFYLWLQFVADQQLAECDAICRQQNMRIGMYRDLAVGVSPNGAETWNDK
                     QLYCLNASVGAPPDVLGPQGQNWGLTPMNPHVLKQQAYRPFIELVRANMSHCGALRLD
                     HIMSLLRLWWIPKGDSAVNGAYIRYPVDDLIAILALESQRHQCLIIGEDLGTVPKEIV
                     SKLKNAGILSYKIFYFEFDEQGKSRDLQHYPYQAMTTLSTHDLPTINGYWRGYDFELG
                     EKFGVYPNSNILAILKQDRVNAKAKILQRLQEHNVEIAPEISEQLNSPVNTAFIHCLQ
                     TYVANVSSGLFGFQPEDWLGMTEPVNIPGTSTQYANWRRRLSVNLEEIFTDKDIQALL
                     KEVNLIRKNQ"
     gene            complement(15253..16914)
                     /locus_tag="PXE50_000009"
     CDS             complement(15253..16914)
                     /locus_tag="PXE50_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative transporter"
                     /protein_id="HDL5620955.1"
                     /translation="MSEIALTVSLLSLVAVLGLWIGHIKIRGVGLGIGGVLFGGLFVS
                     HFMAQFDVKLDAHTLHFIQEFGLILFVYSIGIQVGPGFFASLKHSGLKLNGFAVLIVL
                     ISGILVILIHKFFNVPLPVILGIFSGAVTNTPSLGAGQQVLAELSAESVTEIMGMSYA
                     IAYPFGIIGILLSMWLIRILFRINIEAEAEAFNKQQNRSKDQLSTLNVRLTNPNIHGL
                     TLKQIPDFNLHEVAYSRLKRGNELSIPRVDTILQIGDILHLVGEESSLRKMQIILGEA
                     VDVSVSTKGTIYRSERAVVTNEKVFGKQIRQLMLKGKYDVVISRLNRAGVELVPTGDM
                     TLQFGDVLNLVGRQADIEMVMTIIGNAHSKLQQVQMLPIFIGIGLGVLLGSVPIYLPG
                     FPVALKLGLAGGPLVVALILARIGSFSKLYWFMPPSANLALREIGIVLFLAVVGLKSG
                     GRFLETLLSSEGVEWICYGAIITFVPLMIAGLIARMYNKVNYLTICGLLAGSMTDPPA
                     LAFANEIKEGNGAAALSYATVYPLVMFLRIMLPQVLAIMLWVSGG"
     gene            17132..18508
                     /locus_tag="PXE50_000010"
     CDS             17132..18508
                     /locus_tag="PXE50_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HDL5620956.1"
                     /translation="MLSNEVFISIIVLLILSLLRINVVIALIISALTCGLIGNLGVEG
                     AGFTEALEKTIKSFTGGLGGGAETAMNYAVLGAFAVALSKSGVTDLLAYKVIKSFGHS
                     PSGRSVTWFKYIVLFVLVAFAMSSQNLIPIHIAFIPILIPPLLSVMNKLQIDRRAVAC
                     ALTFGLTATYMLIPAGFGQIFIESILVKNINQAGEPFQLVTTTAEMTKAMLIPVSGMI
                     LGLLFAFFVSYRKPRVYIENMPEPTADDIEARVANVKPFHIGISIVAIIATCSVQLAT
                     NSTIIGGLVGLVIFALGGVFRLKESNDVFQAGLRLMAMIGFVMIAASGFAGVVNSTGG
                     VPALVESLRDVISSKEMAALLMLVVGLFITMGIGSSFSTVPIITSIYVPLCISFGFSP
                     LATMAIVGVAAALGDAGSPASDSTLGPTSGLNADGKHDHIWDSVVPTFIHFNIPLLVF
                     GWIAAMTL"
     gene            18606..19409
                     /gene="xthA"
                     /locus_tag="PXE50_000011"
     CDS             18606..19409
                     /gene="xthA"
                     /locus_tag="PXE50_000011"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HDL5620957.1"
                     /translation="MKFISFNINGLRARPHQLEAIIEKHQPDVLGLQEIKVADEDFPY
                     DLVNHLGYHVFHHGQKGHYGVALLTKKEPIAVRKGFPTDVLDAQKRMIMADIETDFGV
                     LTVLNGYFPQGENRSHETKFPAKQKFYADLQNYLESELKPENPIIIMGDMNISPTDLD
                     IGIGEPNRKRWLRDGKCSFLPEEREWLDRLYSYGLVDTFRAGNPDVNDKFSWFDYRSK
                     GFDDNRGLRIDLILASKSLAERCVETGIDLDIRAMEKPSDHSPVWATFK"
     gene            19563..20147
                     /gene="lptC"
                     /locus_tag="PXE50_000012"
     CDS             19563..20147
                     /gene="lptC"
                     /locus_tag="PXE50_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HDL5620958.1"
                     /translation="MNKRLTVILLIIVAVLGGWYYSLQEKENTGLDQLIKKEGQPEYV
                     GNKMSTTVYDLKGNPQYFAQATEIKRYESTERTEFFKPFIELFAKESTQKQWKVSADY
                     AEITKEKMLNLKGNIKLVALDPASRLQQITTDTLTVDLNTQDIFTESTVKSIGSGFTT
                     TGVGLKGNLKQQVATLQKDVKSYIEPTIIQETKE"
     gene            20171..20677
                     /gene="lptA"
                     /locus_tag="PXE50_000013"
     CDS             20171..20677
                     /gene="lptA"
                     /locus_tag="PXE50_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HDL5620959.1"
                     /translation="MKLMFKSILVSVLLGSSFSAYALKGDTDQPINIDSGSQSLDMTN
                     NIVTFSDNVVITQGSIKVTAANVKITRQEGKKETIDATGSPVTFQQTLDNGKPVNGKG
                     NSVHYDLNSEFLTLIGNAELKQQGSFIKANKITYDVKKQQLKATSGGKTRVKTVLIPN
                     ELQDNKKK"
     gene            20689..21414
                     /gene="lptB"
                     /locus_tag="PXE50_000014"
     CDS             20689..21414
                     /gene="lptB"
                     /locus_tag="PXE50_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005727816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HDL5620960.1"
                     /translation="MSVLYAEHLAKSYKQRQVVKDVSLNVKSGEIVGLLGPNGAGKTT
                     TFYMVVGLVRHDHGTIRIDDQDISTLPMHDRAKQGIGYLPQEASIFRRLSVYDNLMSV
                     LQVRKNINDKQRKERAEELITEFHIEHIRNSLGQSLSGGERRRVEIARALAANPKFIL
                     LDEPFAGVDPISVIDIKKIIVNLKERGLGVLITDHNVRETLDVCERAYIVGSGEMIAS
                     GTPQQVLENPDVKRVYLGDQFKL"
     gene            21456..21968
                     /locus_tag="PXE50_000015"
     CDS             21456..21968
                     /locus_tag="PXE50_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDL5620961.1"
                     /translation="MTKLTEFLSPENVRQGVLISSKKRALELVGKIVAESINQTEQQS
                     EALCPIECFGNLFKREKLGTTGLNQGIALPHAKLPACGDIELTKPIAVFLQLEEAIDY
                     EAQDNKEVDLIYAMMFPENSCEQYKSCLPAIAQKLTDKSLLKQLRAAESAEDIWQILV
                     YADNHLKDEE"
     gene            21981..22844
                     /gene="rapZ"
                     /locus_tag="PXE50_000016"
     CDS             21981..22844
                     /gene="rapZ"
                     /locus_tag="PXE50_000016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HDL5620962.1"
                     /translation="MELIIISGRSGSGKSVALRALEDAGYYCVDNIPLPLIPTLTYYL
                     TQENRSAVISLDIRNLPNTPNAIEELLTQLEPLNAKLIFLDCERNTLIRRYSDSRRIH
                     PLSTQDDLSLEGALDLEQKLLEPLVQNANYIIDTSHLSSHELAENLRQILQGSTEKEL
                     KIIFQSFGFKYGLPADSDYVFDVRFLPNPHWNPELRPMTGLEQPVIDFLERQTEVHNF
                     IYQTRNYLEMWLPMLEQNNRSYLTIAIGCTGGKHRSIFIAEQLAKYFQAKGKNVQVRH
                     KSLEKHHKKTS"
     gene            22927..24111
                     /locus_tag="PXE50_000017"
     CDS             22927..24111
                     /locus_tag="PXE50_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HDL5620963.1"
                     /translation="MKSADIVIVGGGMVGLALAGLLKDVDCQIKIIEKNTPKFDADTI
                     YHRVSAINASSQKILEQIGAFQHIPAQRLSPYTEMKVWEKDSFANIHFDNNDNEIKQL
                     GLSQLGFILENAVIQHALWQQVSQQANVEYIIAAPQTLGVSENGAFLTLDNGEMLSAK
                     LVVGADGANSWVRNQMKMPLTSKDYQHTALVCNVKTTEKHGKTARQIFAEDSIFAFLP
                     MADEHLCSIVWSLPPNKANELKNASEAEFNKALTIAFDNQLGLCEVQSLREIYPLAAR
                     FCRDFAQPRIALIGDAAHTIHPLAGLGVNLGFADARTLANEIQKQLVNNQDIGEYRHL
                     RQFERERKAQAMKLLATMEGLKQLFDGNHPLKKLFRGIGLSLTNQLPFVKKQLIQQAI
                     YL"
     gene            24243..24827
                     /locus_tag="PXE50_000018"
     CDS             24243..24827
                     /locus_tag="PXE50_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein HlpB"
                     /protein_id="HDL5620964.1"
                     /translation="MNKLTKISATALVALFLAACDKPAEKAPATEPTKTTEAAPTTTA
                     PAAEAAKPAETAVAAPSEAAKADYQKLVDWNTAQESTMATAQAELQKKLATQDPKQIQ
                     EGLSAFNKKVEETVKSLDAIEVSDAQIKTFKEKTKSVLTLSSEVISEQVKTISTPNDQ
                     AALQAVQQKAQSLIEAGNELQKLNVELQQRFSAK"
     gene            24894..25526
                     /locus_tag="PXE50_000019"
     CDS             24894..25526
                     /locus_tag="PXE50_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein Hlp"
                     /protein_id="HDL5620965.1"
                     /translation="MNTLAKISLSVLFTLFLTACEQPNSTKTQSSAESPVQVKEESKE
                     EVKPADTGAQDYKMLREWQDTQEKALNDAIKAATETLTDKQKADSTLMQETVNNALLA
                     QIDHIKISAETLNIQNNEVKALKDKTLEVLTLGAQMIVEGAKMEKNPTPEAHKAFGEL
                     QTKLNQLAEEGQQLENILRAKYDPAPAPAPAPAPAPAPAPAPAPAPAPQQ"
     gene            complement(25607..26542)
                     /gene="ftsX"
                     /locus_tag="PXE50_000020"
     CDS             complement(25607..26542)
                     /gene="ftsX"
                     /locus_tag="PXE50_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsX"
                     /protein_id="HDL5620966.1"
                     /translation="MIRSFSKLGAQTNYSLRAVWQDLMQRKLGTFLTVLVIAVSLTIP
                     TVSYLLWKNTHEAATQFYPEPQLTVYLHKNLAEHDVNTVVDRIRAFETDKIESFNYIS
                     RQQSLDEFRSWSGFGEALDILDENPLPAVVTLKPKANFNNADTMVELRNGLQQIKGVQ
                     EVRLDNGWLEKLTALTWLIARIAVVCTLLMLLAVFLVIGNSVRTDVANSKAAIEVQQI
                     LGATDHFIARPFLYTGMIYGLFGSLLAVLFSAVTISYFTGVVKYVTDMFTVQFELNGL
                     DFSEAFFLVVLCVFIGWLSAKIATMRNIFRIGSRG"
     gene            complement(26552..27205)
                     /gene="ftsE"
                     /locus_tag="PXE50_000021"
     CDS             complement(26552..27205)
                     /gene="ftsE"
                     /locus_tag="PXE50_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HDL5620967.1"
                     /translation="MIKFTNVNKVYKGGKPALQGIDFHLPAGGMAYITGHSGAGKSTL
                     LKLIMGIERANGGQILFNGHDITRLAHHELPFLRRQIGMVHQDYRLLTDRTILDNVAL
                     PLIILGMNQAIVEREARIALERVGLADKANYLPLHLSGGEQQRVDIARAIVHRPTLLL
                     ADEPTGNLDEKLSFEIFRLFEEFNQAGTTVLIATHDTNIISKRPKPCLVLEQGHLKF"
     gene            complement(27198..28694)
                     /gene="ftsY"
                     /locus_tag="PXE50_000022"
     CDS             complement(27198..28694)
                     /gene="ftsY"
                     /locus_tag="PXE50_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HDL5620968.1"
                     /translation="MSEKKKGFWSWLGFGKKEEAEQKEIQQEQESIQPEQPVIVEPET
                     EKSFSEKLDELEDKIEEKVDQLEDYFEEKEEKIEQFAEQVEDTIEQKVEDFKEFVEEK
                     VEEAKAFFDDVEDKIEQTFEEQKGEQAVENLQNIATEQLDLNEQEQVTYQVEEAVAEE
                     VAETELVNNVQDTVEESTIQDEYQEKPSQGGFFSRLIQGLIKTKQNIGSGFRNFFRGK
                     KIDDELFEELEEQLLVADLGMPTTQKIINNLTQHATKQQLKDADLLYQQLKVELGEVL
                     KPVAQPLVLEAKKPYVILMVGVNGVGKTTTIGKLARKFQQEGKSVMLAAGDTFRAAAV
                     EQLQVWGERNNIPVVAQSTGSDSASVIFDAMQSAAAKGIDVLIADTAGRLQNKNNLMD
                     ELKKIVRVMKKYDETAPHEIMLTLDAGTGQNAISQAKLFNEAVGLTGITLTKLDGTAK
                     GGVIFAIADQFNIPIRFIGVGEKIEDLRPFNAEEFIEALFSHEDEQND"
     gene            28773..29363
                     /gene="rsmD"
                     /locus_tag="PXE50_000023"
     CDS             28773..29363
                     /gene="rsmD"
                     /locus_tag="PXE50_000023"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HDL5620969.1"
                     /translation="MKKNRNSPQSVQQMGEVRVIAGLWRGRKLPVLNAEGLRPTTDRV
                     KETLFNWLMHDIAHSRCLDCFAGSGSLGIEALSRQAQAVVFLEKFANAANQLKKNLQA
                     LKSEQGSVIHTDTLAYLAQKNNGEPFNIVFIDPPFHQGFVPQVLNLLAENNWLAPNAI
                     LYVETEKNHPPLELPQGWQILKEKAAGMVVSRLIQL"
     gene            29447..29761
                     /locus_tag="PXE50_000024"
     CDS             29447..29761
                     /locus_tag="PXE50_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciU family protein"
                     /protein_id="HDL5620970.1"
                     /translation="MKKLTPDEAIDIAYDIFLEMAGENLDPADILLFNLQFEERGAVE
                     MVETSEDWDQEIGTLIDPDAFAEVWVGLVNEQDEMDDVFARFLISHDEENREYHVVWK
                     EK"
     gene            29774..30286
                     /gene="hpaC"
                     /locus_tag="PXE50_000025"
     CDS             29774..30286
                     /gene="hpaC"
                     /locus_tag="PXE50_000025"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     reductase component"
                     /protein_id="HDL5620971.1"
                     /translation="MANIDTNQPIEASLKFREAMAHLSSAVSIVTTNGVAGKAGLTVS
                     SVCSVTDSPPTLLFCINKNSHVHDIIQQNGKVCVNVLSHEQEDLAKHFAAILESTMEE
                     RFGWDIWNNGFDDQPVLRSAISALQGNIVDTHAVGTHTIFVVEVSHIDVEPNHSLVYF
                     ARQFRSVNID"
     gene            30404..31276
                     /gene="tehB"
                     /locus_tag="PXE50_000026"
     CDS             30404..31276
                     /gene="tehB"
                     /locus_tag="PXE50_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase TehB"
                     /protein_id="HDL5620972.1"
                     /translation="MENLICYKQMPVWTKATLPQMFQEKHNTKVGTWAKLTILKGSLK
                     YYELTEEGEIIKEDIFDANHQRPMVEPQLWHKVEALSDDLECQLAFYCKPEDYFAKKY
                     NLTATHSEVLNAVNYTKGGKALDLGCGRGRNALYLNLLGFDVTAVDHNQESIDFLNYM
                     IEKEQAQNITTAVYDINEATIGSQNGEYDLIISTVVMMFLNRERIPAIIENMQKNTKV
                     GGYNLIVCAMSTDDYPCPMPFSFTFKEGELADYYQGWELVKYNEDLGHLHKTDENGNR
                     IQLRFATMLAKKIS"
     gene            31414..32451
                     /gene="purM"
                     /locus_tag="PXE50_000027"
     CDS             31414..32451
                     /gene="purM"
                     /locus_tag="PXE50_000027"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011962107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HDL5620973.1"
                     /translation="MSNTQLSYKDAGVDIHAGNELVERIKPDVKRTRRPEVMGGLGGF
                     GALCALPTKYKEPILVSGTDGVGTKLRLAIDLNKHDTIGQDLVAMCVNDLVVQGAEPL
                     FFLDYYATGKLEVDVATNVVKGIADGCVISGCALVGGETAEMPGMYHEGDYDLAGFCV
                     GVVEKSKIIDGSTVKTGDALIALASSGPHSNGYSLIRKVLEVSRSNPATDLLEDKPLS
                     EHLLAPTKIYVKSILKLVEEVDVHAIAHLTGGGFWENIPRVLPESAKAVIDESSWQWP
                     AIFSWLQEKGNISRYEMYRTFNCGVGMVIALPERDVEKALTLLKESGENAWLIGKIED
                     LGTGSEQVEIR"
     gene            32529..32807
                     /locus_tag="PXE50_000028"
     CDS             32529..32807
                     /locus_tag="PXE50_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1294 domain-containing protein"
                     /protein_id="HDL5620974.1"
                     /translation="MQLFWPIYFVLMNLAALYLMYSDKQKAIKKEWRVPEITLLSFCL
                     LGGAIGVYLGMKYFRHKTQHWYFHVAVVLSTFAWLIGLPYFYLALSSY"
     gene            32950..34377
                     /gene="aspA"
                     /locus_tag="PXE50_000029"
     CDS             32950..34377
                     /gene="aspA"
                     /locus_tag="PXE50_000029"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HDL5620975.1"
                     /translation="MSDVRIEHDLLGEREVPNSAYWGIHTLRAIENFNISNVTISDVP
                     EFVRGMVMVKKATALANGELGAIPKKIAKAIVAACDEVLVKGRCLDQFPSDVYQGGAG
                     TSVNMNTNEVIANLALEILGEAKGKYDIVNPMDHVNASQSTNDAYPTGFRIAVYNSIT
                     KLINKITYLQTAFENKATEFSDVLKMGRTQLQDAVPMTLGQEFKAFAVLLDEEVRNLK
                     RTAELLLEVNLGATAIGTGLNTPEGYSTLAVKYLAEVTQLPCSLSENLIEATSDCGAY
                     VMVHGALKRTAVKLSKVCNDLRLLSSGPRAGLNEINLPELQAGSSIMPAKVNPVVPEV
                     VNQVCFKVIGNDTTVTFAAEAGQLQLNVMEPVIGQAMFESIELLSNACINLRDKCIDG
                     ITANRDICQNYVFSSIGIVTYLNPFIGHHNGDIVGKICATTGKSVREVVLERGLLTEE
                     QLDDILSIENLMNPTYKAKRFTEEE"
     gene            complement(34452..36470)
                     /gene="rep"
                     /locus_tag="PXE50_000030"
     CDS             complement(34452..36470)
                     /gene="rep"
                     /locus_tag="PXE50_000030"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HDL5620976.1"
                     /translation="MKLNSQQQQAVEYTKGACLVLAGAGSGKTRVIINKIAHLIAHCG
                     YSPKQIAAVTFTNKAAREMRERVDHSIGKENSKGLTISTFHTLGFEILKREYKLLGFK
                     SGMTLFDEQDQIALLKHLLPENVTEDKDLLKALIATISNWKNDLLSPERVLTRVRDER
                     ERVFSHFYQLYQNQLKAYNALDFDDLIMLPVLLFRQFPEAKSRWQQKIRYLLVDEYQD
                     TNTSQYELIKLIVGNEPNFTVVGDDDQSIYSWRGAKPENMQRLREDFDLQVIKLEQNY
                     RSSQRILHCANILIDNNDHLFSKRLFSELGQGEKLQVIEAKNEEHEAERIVGELIAHR
                     FSKKTKYKDYAILYRGNHQSRLLEKLLMQNRIPYKISGGTSFFARAEIKDMMAYLRLV
                     VNQDDDAAFLRIVNTPKREIGAATLEKLGILANEKQVSLFEAIFDFELIQRLTPKPYQ
                     ALQDFARWIVEIADQADRSDPIEAVKDLLAKIQYEAYLYEMAANPKVAEMQSRNVQTL
                     FEWVQAMLEGDEIEPPMNLVQVVNRLTLRDMLERGEEDDEADQVQLMTLHASKGLEFP
                     HVFLIGMEEGILPHQTSLDEDNVEEERRLAYVGITRAQQTLTFSLCKERRQYGEIIKP
                     EPSRFLLELPQDDLEWESEKPRMTEQEKEAKSSANIANLMAMLKANKK"
     gene            36718..37833
                     /gene="potA"
                     /locus_tag="PXE50_000031"
     CDS             36718..37833
                     /gene="potA"
                     /locus_tag="PXE50_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     ATP-binding protein PotA"
                     /protein_id="HDL5620977.1"
                     /translation="MEKVEQKAIIELKNVTKSYGSKTILKNLNLTINDGEFLTILGPS
                     GCGKTTALRLIAGFEDLTEGSIILDGQDVSNVPAEQRPVNTVFQSYALFPHMTIFENV
                     AFGLRMQKVPNAEIEPRVMEALRMVRLEDRAQQKPAQLSGGQQQRIAIARAVVNKPKV
                     LLLDESLSALDYKLRKEMQNELKALQRQLGITFIFVTHDQEEALTMSDRIIVMNAGKI
                     AQDGTPREIYEEPSNLFVARFIGEINVFDATVIERVDATNVKANVEGRICNIKVEDLE
                     VQPNQKLKVLLRPEDIVIEELDENESSKAIIGHIIDRNYKGMTLESSVRLDHNGMNVL
                     VSEFFNEDDPNIDHEVGQKVALTWYEGWEVVLNDEGE"
     gene            37820..38683
                     /gene="potB"
                     /locus_tag="PXE50_000032"
     CDS             37820..38683
                     /gene="potB"
                     /locus_tag="PXE50_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005698572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter permease
                     PotB"
                     /protein_id="HDL5620978.1"
                     /translation="MKANNKFQNGAVATIFGWLLLFVLVPNVLVLIISFLTENRQSQY
                     FVDFAFSFDAYKSLFNDTYAAVLWNSLYMAGIATFFCLIIGYPFAFFIAKMPERIRPF
                     LLFLVVLPFWTNSLIRIYGIKIFLGVKGFLNESLMALGIISEPMRLLNSEIAIIIGLV
                     YILLPFMILPLYSSIEKIDNRLLEAAKDLGANAFQRFIKVTIPLTMPGIVAGCLLVLL
                     PAMGMFYVADLLGGGKTPLVGNIIKSLFLNTNQFALGSAVSIALTILMALMLYVYYRA
                     NKLLNKKVELE"
     gene            38683..39450
                     /gene="potC"
                     /locus_tag="PXE50_000033"
     CDS             38683..39450
                     /gene="potC"
                     /locus_tag="PXE50_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007525438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter permease
                     PotC"
                     /protein_id="HDL5620979.1"
                     /translation="MKKMFRNLFMLVVFAYLYIPIIILVINSFNEDRFGLNWKGFTWN
                     WYERLFSNDTLVQATLNSLTIAFFAATFSTILGALTSIALYRYRFRGKKLVGGMLFVV
                     MMSPDIVMAVSMLVLFMILGIKLGFISLLIAHITFCLPYVVIAISSRLSDFDGKMLEA
                     AKDLGASEVTILRKIILPLALPSIISGWLLSFTISLDDVIVSSFVTSPSYEVLPLKIF
                     SLVKTGVTPEVNALATIMIIFSLTLVVLSQLVVKKKV"
     gene            39651..40574
                     /gene="oppB"
                     /locus_tag="PXE50_000034"
     CDS             39651..40574
                     /gene="oppB"
                     /locus_tag="PXE50_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppB"
                     /protein_id="HDL5620980.1"
                     /translation="MLKFIFKRLLEAIPTLLILITFSFFLMRLAPGSPFTSEKAYPPK
                     VMANIEAKYHLNEPLYKQYFLYMENLSKGDFGPSFKYKDQSVNNLIASAFPVSIKLGI
                     TAFIFAVLIGLTAGTIAALKQNSKWDYLVMGFSMTGIIMPSFVFAPLLVLMFAIYLKW
                     LPAGGWNGGQLYYMVLPVLSLTISYVAGIARITRGSMIEVLHSNFIRTAKAKGLPMRK
                     IIFKHALRPALLPVITYLGPAFVGIITGSMVIESVFGLPGIGQLFVNGALNRDYSLVL
                     SLTILVGTLTILFNAIVDILYAVIDPKIRYS"
     gene            40589..41488
                     /gene="oppC"
                     /locus_tag="PXE50_000035"
     CDS             40589..41488
                     /gene="oppC"
                     /locus_tag="PXE50_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppC"
                     /protein_id="HDL5620981.1"
                     /translation="MQNSSKNQPLVEVTSTIQGRSLWQDARRRFFRNKAAVASLIILC
                     CIILFITFAPMLMPFSYEDTDWNMMGIAPDFESQHYFGTDSSGRDLLVRVAIGGRISL
                     MVGIAGALIAVLIGTIYGAISGYFGGKVDMVMMRFLEILSSFPFMFFVILLVTFFGQN
                     IFLIFIAIGMVAWLNLARIVRGQTLSLKNKEFVEAAIVCGVSRRQIIWRHIVPNVLGL
                     VVVYASLEVPSLILFESFLSFLGLGTQEPMSSWGALLSDGAAQMETSPWLLAFPAFFL
                     CLTLFCFNFIGDGLRDALDPKDK"
     gene            41498..43093
                     /locus_tag="PXE50_000036"
     CDS             41498..43093
                     /locus_tag="PXE50_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5620982.1"
                     /translation="MELLAVNNLDVYLKTDEELVHAVRNVSFSIEKGQTLAIVGESGS
                     GKSVTSMAIMQLLPKNIVSFGERSSIIFEEQNLLTLSEKAMQTVRGDRIGMIFQEPMT
                     SLNPYMPIGKQVAETVQTHNPQISNAEAEKMVLETLQKVKIPDAEKKMICYPHEFSGG
                     QLQRIMIAMAIINKPDLLIADEPTTALDVTTQAEILDLMHDLQRDMGMAIILISHDLR
                     LVHKYSDLVCVMQNGEIIERGETETVFTNPQHPYTVELLTPIPTNLKGELPPNAPTLL
                     QGEHIKVDYILKRSLFGKPKKVFNALKDISLHLKTGETLGIVGESGSGKSTLGRAIMQ
                     ILDYRGNITFAGKTLANLNKAERQALKKDMQMVFQDPFNSLSPRLTVGEIIAEGLTVH
                     CPQMSKTERREKVMKMLEEVNLNPAMINRYPHEFSGGQRQRIAIARAIILEPKFVLLD
                     EPTSALDRSTQITVIELLNRLQKKYGLSYIFISHDLAVIKALSDRVIVMSQGEIVESG
                     DVTQIFENPQQEYTKRLILASNL"
     gene            43273..43668
                     /locus_tag="PXE50_000037"
     CDS             43273..43668
                     /locus_tag="PXE50_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HDL5620983.1"
                     /translation="MKKLMIFATTAMIVSNLAHAAGEQSDAREAHESTVKTSTVKYSC
                     QNGKKLSVKYGFNKQGIPTYAEAKLSGKKRFMPINLYTTDATGTNFGDENNFSLYGDP
                     MEFTNHRKASVNIQSPASEILYKGCTPQK"
     gene            complement(43878..46037)
                     /locus_tag="PXE50_000038"
     CDS             complement(43878..46037)
                     /locus_tag="PXE50_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent
                     hemoglobin/transferrin/lactoferrin family receptor"
                     /protein_id="HDL5620984.1"
                     /translation="MQIKQTVLAIAITPFISQLSLAQETKISSIELDTIEVNEQQENL
                     LKQQAVMSNEDLVRYSTDMGVPQTGRFGPQGFNIRGVEGNQVAVTVDGISQAASNNYA
                     TFSRYSYYNKSRPEIDTELMSDVTIEKGSSTKVGNGALGGSVNYKTKTVSDILMKGRQ
                     FGGMLKYTYNGQNKENIETAGIAADGQYADALVMYSHRQGHETQTTSKGPDIMGSGRG
                     LPNPYKNNQYSYLAKLGLKWNDENRLELKTSKQRSKNAGQELSYSTVTLRDFLDVQEI
                     ETYGVTYLYTPKNSILENIKVAVTKQDTEISGINDQITIARGTKTDNTKRAFNTKNVE
                     GSLGVTFKPVDLGNTEHKLSTELGYGVSDFSFDMQTYTAGITPTDQNMQSPAKTKSFH
                     ILMGDSILLTQNLSAHLNARYEQSKLHSDDNSLSDKTFNNWAGDIGLNYQLSPVWQIG
                     YKLSRGFRTPTASEMFFNREVQGRGASQTFLANTNLKPETSLGNEISLVGNGSLGSLS
                     VAAYHTHYRNLIDLATIGNNIYQSQNVNRAKIKGVDINGTLDLNTAWNAIPQGFELNG
                     GFGYARGKRNDGTDLLTVQPLKALFGIGYRAVNNDWAIHLNGTYTQGKKAKYAQQYAI
                     LANTGYLSYDKSLTTYPYLSNSATVFDLVAHKKFGERAIVKVGVYNLFNKKYWTWDSL
                     RTIGITSPGVANSITGEGLNRYLAPERYVMASVEFKF"
     gene            46144..47010
                     /locus_tag="PXE50_000039"
     CDS             46144..47010
                     /locus_tag="PXE50_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5620985.1"
                     /translation="MEYKMRTLLFSFIALSMCLNTTKAAEKIVSTAGYASEIVAALGK
                     ADKLVGVDTTSVKPQTIMEKKPKIGYRRQLSAEGILSLTPDLIILAPDAGPNAVIEQI
                     KASGIPLLHLGEKPSLAGIREDIQQIAKAIGAESEAKQLTETILADEKKLADIRSQHS
                     TDKEVLVLIDTASQGIFGLGKKSVGDHFLTLLNLNNSFNAEGNKPLANEALAASNADV
                     ILLASRNQAKESATISKLAESSPQYAQLTNTQAGKKGCVFAINILDALGFGPYTAQYA
                     HQILTTIQPCLK"
     gene            47021..48007
                     /locus_tag="PXE50_000040"
     CDS             47021..48007
                     /locus_tag="PXE50_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDL5620986.1"
                     /translation="MKLHLTLIFTLIISLVICTHLGAMSLPLSAWHCNNAECESAAYI
                     LWQIRLPRLLGALFIGAALAISGATMQGLFRNPLVDPGIIGVSSGAALAAALYIVVIQ
                     PLLPESISYYALPIAAFLGGWLVTFMLYLLSQRNGQLHIAIMLLIGIALAAFSGALTG
                     ILIYVADDNQLRSLTFWSMGSLAGMNWQMVAMMAAVVFICSPLIWREHRALNALTLGE
                     EDAQYIGFDIAKVKRRLVFYVALLTGTSVACVGAIGFVGLVIPHLMRLLGGSNHRHLL
                     LNSLVCGAILLMIADTLARTLAAPAEIPIGIFTALFGAPFLAVMVWKSGKHI"
     gene            48007..48813
                     /locus_tag="PXE50_000041"
     CDS             48007..48813
                     /locus_tag="PXE50_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5620987.1"
                     /translation="MSNLLTCQNLSIVHQQKKLLEIQEIAFEQGKFTAIIGPNGAGKT
                     TLLKALSGNNAQTNSAVFYQHQRLTDLNGYALAQKRAMLSQQSQIAFPLKVEELVQLG
                     REPYRQSEFAKFNEKITAWAMETMSLTALKERSSIQLSGGEQHRAHIARVLAQLVPEP
                     NADLSGSWLLLDEPTNHLDIHHQYQLFSLLQKLKQQGLTIIAILHDPALAINQADHIL
                     MLKNGEKFAEMSAKAIAESCLLDELYEMKMGCRYCPHSGQYYLCPALAES"
     gene            complement(48834..49472)
                     /gene="purN"
                     /locus_tag="PXE50_000042"
     CDS             complement(48834..49472)
                     /gene="purN"
                     /locus_tag="PXE50_000042"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HDL5620988.1"
                     /translation="MKKFVVLISGNGSNLQAMIDAQKSADTSGQICGVICNKADAYGL
                     IRAKQAGIPTFVFSRKDYQSNVEMDLAIAEQIEQLGAELIVLAGYMKILTPEFTQHFA
                     GKILNIHPSLLPKYPGLNTYQRAIEAGESEHGTTIHFVNEEVDAGAVVLQAKVPIYPE
                     DEIEDVMARVVEQEHRYYPLVIEWFCSGRLVSQHGKAYLDGKLLPACGYAED"
     gene            complement(49579..51736)
                     /locus_tag="PXE50_000043"
                     /pseudo
     CDS             complement(49579..51736)
                     /locus_tag="PXE50_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484758.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            complement(51790..52626)
                     /locus_tag="PXE50_000044"
     CDS             complement(51790..52626)
                     /locus_tag="PXE50_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChaN family lipoprotein"
                     /protein_id="HDL5620989.1"
                     /translation="MLPRISSFLASLFMAFFLLGCSVSTQSLNEQNVDSIGQIIDLNT
                     NQTISFTELLSRLSSQDYVLVGEEHTQLIHHQIELYLFNQLTKKAKLHLIALEMLNVD
                     QQPAIDRIQFNRPVNLSATDLREAIQWQKWDWKMYQDLVVESLGSNSRVIATNLTDKE
                     VEILLNGAEPLKGSVSTSSEVKQKIAQLLLSMNHGMPYPMENMVAVQQFRDRRMAEKL
                     VKNALSTSLLIAGNHHVRKDLGVPLHIAEYDRTKKVAVLMLKTEREEITSSQADYLWV
                     TQ"
     gene            complement(52784..54046)
                     /locus_tag="PXE50_000045"
     CDS             complement(52784..54046)
                     /locus_tag="PXE50_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000919159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HDL5620990.1"
                     /translation="MLKRDMNIADYDAVLWQAIQDEDRRQEEHIELIASENYASPRVM
                     QAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKALFGADYANVQPHSGSQAN
                     AAVYMALLNPGDTILGMSLAHGGHLTHGASVSFSGKIYKAEQYGITDEGLIDYEALRK
                     QAQEVKPKMIVAGFSAYSQVMDWAKMREIADEVGAYLFVDMAHVAGLIAAGVYPNPLP
                     HAHVVTTTTHKTLAGPRGGLILSASGDEEMYKKLQSAVFPAGQGGPLMHVIAAKAVCF
                     KEALEPEFKAYQQQVVKNAKAMVEVFKQRGFDVVSNGTENHLFLVSFVKQGLTGKAAD
                     AALGAANITVNKNSVPNDPQKPFVTSGIRVGTPSVTRRGFKEAEVTALAGWMCDVLDS
                     IGKDNHEQVIAETKAKVLDICKRLPVYA"
     gene            complement(54322..54543)
                     /locus_tag="PXE50_000046"
     CDS             complement(54322..54543)
                     /locus_tag="PXE50_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5620991.1"
                     /translation="MLNLFKKPIKKSSFEAWAKLMDDVAKVAILAIPVILYGEYSLLM
                     KFTHSITLFAVVYFLLATARLFRETAEEM"
     gene            complement(54631..55662)
                     /locus_tag="PXE50_000047"
     CDS             complement(54631..55662)
                     /locus_tag="PXE50_000047"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HDL5620992.1"
                     /translation="MSNILLPTSTAGSLPKPSWLAEPEKLWSPWKFEGEELLQAKRDA
                     LLVSLAEQIAAGIDIVSDGEQTRQHFVTTFIEHLEGVDFSKREIVRIRNRYDASVPSV
                     VGAVSRPKSVFVDDAKFLRAHTDKPIKWALPGPMTMIDTLYDGHYKSREKLAWEFAKI
                     LNEEAKELEAAGVDIIQFDEPAFNVFFDELNDWGVAALERAAEGLKCETAVHICYGYG
                     IKANTDWKQTLGNEWRQYEESFPKLQQSKIDIISLECQNSRVPMDLIELVRGKKVMLG
                     AIDVATNIIETPEQVADTLRKALQFVDADKLYPSTNCGMAPLSRQVAQGKLQALSQGA
                     AILRAEFAK"
     gene            complement(55750..56727)
                     /locus_tag="PXE50_000048"
     CDS             complement(55750..56727)
                     /locus_tag="PXE50_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1852 domain-containing protein"
                     /protein_id="HDL5620993.1"
                     /translation="MTTNFKCQVHTIEFNEDYQPEQSTRLTTNFANLARGENRKQNLQ
                     NAIAMINNRFNDLANWDNPNADRYSVKLDIVSLDIDVEGKGEFFPAIEWLKTYVIDYK
                     TGKTIDGIIGNNFSSFVRDYDFSVLLLDHNKDKPQFSVPEGYGELHGKLFKHLLASPE
                     YTAKYKKPPVICLSVATTRTYTRTTNVHPILGVEYLQDSYSLTDAYFAKMGLKVRYFM
                     PPKSVAPYAFYFDENADLLNDYTNLELISTIATMEAFQKIYRPEIYNANSVAGQVYKG
                     SLTYQDYSVTKVEYDREERTQLAIKQGKYTEEHFIKRYQAILEAWATEE"
     gene            complement(56866..57750)
                     /locus_tag="PXE50_000049"
     CDS             complement(56866..57750)
                     /locus_tag="PXE50_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HDL5620994.1"
                     /translation="MNQQKPFEVIAIVGTPRHDSAFETHLAVYNWLKDRDYQILVETE
                     VATQLQLKESYSLDQIGQRAELVIVIGGDGNMLGIARALAKYRVPLIGINRGNLGFLT
                     DIAPQTAFEQLYSCLVKNEYVIEERFLLEAFIERNGKIIAANNALNEIVVHPTQVARI
                     IEFEVYIDGKFAFSQRADGLIVATPTGSTAYSLSAGGPILTPNMNAMALVPMHPHTLS
                     SRPLVVDGDSQISLRFAKYNTPDLEVICDGQVNMHFTPEDRVLVRKSPDKLQLLHLKD
                     YSYFTVLGSKLGWASKLF"
     gene            complement(57760..58794)
                     /locus_tag="PXE50_000050"
     CDS             complement(57760..58794)
                     /locus_tag="PXE50_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA methyltransferase"
                     /protein_id="HDL5620995.1"
                     /translation="MQFKENNQPRFKHREERRSDECSPRFSDKGKMRGNEGKSDRPHK
                     LHFKRDEAYSRSEQIYPAEGKKASGEGSVQIWVKGGNSSVKEKKNGPLSPRAPEKIKK
                     NRLEEMKVYGENACISLFQQRPESIVRLWATVEGAKKLGDLMSYLAQHKKAYHVIDRE
                     EMERVTGTEHHGDMCLLVKKTASFVLEGYLQVPKKQDCLVLLDGVNNAQNVGGIIRTC
                     AFYGVKGIITENVDSLNSSAAARVAEGGLEFVRALETKNKHIALVQLRQAGYQIVHLT
                     RHKQAPSLTKIKLAEKVVFVLSEIPASDVAYAEDTTIQLSFNNPLNSGLNVAVNAGIL
                     LNQWYQTHIL"
     gene            58975..59787
                     /gene="suhB"
                     /locus_tag="PXE50_000051"
     CDS             58975..59787
                     /gene="suhB"
                     /locus_tag="PXE50_000051"
                     /EC_number="3.1.3.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012621556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-1-monophosphatase"
                     /protein_id="HDL5620996.1"
                     /translation="MNPMLNIAIRAARKAGNIIAKGYEQSPQDTQVLQKNTNDYVTEI
                     DKAAEAAIIDVIRKSYPEHSIVTEESGVLNGSNENVQWVIDPLDGTTNFVKRLPHFAV
                     SIAVRENGRTTVGVVYDPIRNELFTAVRGEGAKLNEFRLRIDAERRDLKGTVIATGFP
                     FKVIRHRDAHLNMLEGLMNNGVADFRRTGSAALDLAYVAAGRVDGFFEIGLKPWDFAA
                     GELIAREAGAIVTNFVGGTDYLKTGNLVVGNGRVVKEILNSIQPTLTEELKA"
     gene            59832..61685
                     /gene="dxs"
                     /locus_tag="PXE50_000052"
     CDS             59832..61685
                     /gene="dxs"
                     /locus_tag="PXE50_000052"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HDL5620997.1"
                     /translation="MEKKYPLLSEINSPEDLRLLSKDQLQTVVDELRAYLLESVSQTS
                     GHLASGLGVVELTVALHYVYQTPFDQLIWDVGHQAYPHKILTGRRDQMHTIRQKDGIH
                     PFPWREESPYDVLSVGHSSTSISAGLGIAVAAEKENAGRKTVCVIGDGAITAGMAFEA
                     LNHAGALHTDMLVILNDNEMSISENVGALNNHLARIFSGSLYTSVRDGSKKILDKVPT
                     IKNFMKKSEEHMKGVIFSPESTLFEELGFNYIGPIDGHNIDELVKTLSNMRELKGPQF
                     LHIRTKKGKGYTPAENDPIGYHGVPKFDPTAAELPKSKAAPTYSNIFGDWLCEMAERD
                     PKIIGITPAMREGSGMVEFSKRFPEQYFDVAIAEQHAVTFGAGLAIAGYKPVVAIYSS
                     FLQRAYDQLIHDVAIQNLPVIFAIDRAGIVGADGQTHQGAFDLSFMRCIPNMTIMAPS
                     DENEMRKMLYTAYTMNTPSAIRYPRGNAKGVKLEPMQRLEVGKGNIIREGKKVAILNF
                     GALLDEAKIVAEKHNYTLVDMRFIKPLDEALLQKVADSHELLVTLEENAIQGGAGSFV
                     NEYLQNIGKIKPLVMLGIPDFFVPQSTQAEAYADLGLDAQGIEAKIQKFDI"
     gene            61871..63457
                     /locus_tag="PXE50_000053"
     CDS             61871..63457
                     /locus_tag="PXE50_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005667512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HDL5620998.1"
                     /translation="MLWFFFCVAVLVLGYFTYGKIIEKIFVINPKRATPAYAMNDGVD
                     YMPMSKTKIWLIQLLNIAGTGPIFGPILGALYGPVAMLWIVIGCIFAGAVHDYFCGML
                     SIRNGGATMPNLAGKFLGRPVKLFINVMALILLLLVGVVFVASPAQLLSTITMDIAGA
                     TQSAMELGDVEAIKESVASGGVTVWGMDKATVISVWTLIIFAYYILATLLPVDKIIGR
                     IYPFFGALLLFMSVGMVYGLVSAHLSATDPIDFFRTVNADGQGLTWEKFTQNFQVKGD
                     VPIWPLLFLTISCGALSGFHATQTPLMARCAQNEKEGRFIFYGAMITEGVIALVWCAV
                     GLSFYENPQALQDAISAGSPSKVVYDSSLHFLGFIGGIFAVLGVVVLPITSGDTAFRA
                     ARLQLAEIFGLEQRTLVKRLYIAVPLFVLGFIVSKVDFSVLWRYFTWANQMTAMVMLW
                     TAAGYLYRYKKFHWVCSIPAWFITTVCATYLANNKIGFGLDYELSVYIGFAITVVCVI
                     CFFAFLKPSEARDEDAYVTN"
     gene            63518..64312
                     /locus_tag="PXE50_000054"
     CDS             63518..64312
                     /locus_tag="PXE50_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HDL5620999.1"
                     /translation="MRFFDTHTHLDYLAESLNLSIPELVENAKQHQVECILIVAVFAK
                     NFAKVTACAKQKPENLVYGLGLHPLYIQQHQQQDLILLENLLSQQDPQCTAIAEIGLE
                     KAVSEVSTPELWKKQCEFLEAQLSLAKKFNLPVNLHSRKSHDQLFVFLKKAQLTKTGV
                     VHGFAGSYEQAKRFVDLGYKIGVGGTITYERANKTREAIRKLPLESLLLETDSPDMPV
                     FGFQGQPNRPERLLVTFNSLCELRTESPNLIAETIWQNSERLFFYA"
     gene            complement(64303..65070)
                     /locus_tag="PXE50_000055"
     CDS             complement(64303..65070)
                     /locus_tag="PXE50_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--protein ligase"
                     /protein_id="HDL5621000.1"
                     /translation="MVKPVYIYCDEGSSEIGVQSLLLAVKQHLQRPAYLINAKQIIQS
                     KFSDGCLLIMPGGADLPYCKKLNGEGNRRIRQFIEQGGAYLGICAGAYYGCAELNFVG
                     RDYSVNGNRELALFNGIAGIAKGSLPQFTNGQLYDKNIGSKAIVEVTLAEGGKMPFYY
                     HGGCCFEPNSTTVIYNPLAYYPDGSVAMIEGELGRGYYLLSGVHFELQAVVYWQKIVN
                     CCENLDIKTQEEAICSNFNVNYGSQIWQHLKQRLNQA"
     gene            65151..65642
                     /locus_tag="PXE50_000056"
     CDS             65151..65642
                     /locus_tag="PXE50_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HDL5621001.1"
                     /translation="MFTTQLIQTKRWLEANSITTFWLKTFIGATLLAIFAQISVPMYP
                     VPITGQTLALTVVGFAMGRKAATAAVLLYLFEGAIGLPVFAGGASGFHHFFGPTGGYL
                     LGYIPTAYFLGYYSDKGVLNSFWKSLFVALIASVITFAFGLAQLSLYQKAQYYKRAYI
                     HLF"
     gene            65917..67266
                     /locus_tag="PXE50_000057"
     CDS             65917..67266
                     /locus_tag="PXE50_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5621002.1"
                     /translation="MNSTKFYSLYSGIFFLFFGYGLFLNSAGIKLAEMGITDIIIGLL
                     NAAFFIGAALSTIFAHRIVSSVGHIRSFSVFCAVFAIAALGHIMIDTLWIWGVLRIIL
                     GFCHYSLLLLVESWLSEKTNVDTRGKVLATYNIIFYLAFILGVSLLSLELSSRNIFIL
                     STILVVMSMIPIALTKMVQPDIPARERISIPKLFAISPLALATSFISGMLVNGFFTMA
                     SVFLLKFSFSLSEISLYLMISMIGGFISQMPMAILSNRIGRRNAILACSVIATLTALA
                     GLFAIFQENLTAWGQYIIAFFFGCSLFSLYALSIARANDELPNNMNTVEVSRGLLFCY
                     GVGALVAPPLIGFAMSLSAEYGFYALFGLFSLSLFICAFRTKSIPKAERAEMQYATPI
                     ATASPLEEIEVVEDALIPFDEEAVQEYQAQLEILEQDPQTENENIELDEGAAENSKV"
     gene            67433..69364
                     /gene="thrS"
                     /locus_tag="PXE50_000058"
     CDS             67433..69364
                     /gene="thrS"
                     /locus_tag="PXE50_000058"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011200229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HDL5621003.1"
                     /translation="MPIITLPDGSQRSFDNPVSVMEVAQSIGAGLAKATIAGRVNGER
                     RDASDIISQDSTLEIITAKDEDGLEIIRHSTAHLLGHSIKQLFPDVKMAIGPTIENGF
                     YYDIDLDRSLTQEDLDALEKRMLELAKTNYDVVKRPVSWQEARDTFEKRGEPYKMAIL
                     DENIERTATPALYHHEEYIDMCRGPHVPNMRFCHHFKLQKVAGAYWRGDSKNKMLQRI
                     YGTAWADKKQLAEYLQRLEEAAKRDHRRIGKALDLYHMQEEAPGMVFWHNDGWTIFRE
                     LETFVRTKLKEYDYQEVKGPFMMDRVLWEKTGHWQNYADLMFTTQSENREYAIKPMNC
                     PGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQ
                     IESEVISCIKMVYDIYSTFGFTNIAVKLSTRPENRIGDDAMWDRAEKGLANALRNNGL
                     EYEIQEGEGAFYGPKIEFALRDCLGREWQCGTVQLDFALPGRLAASYVAEDNGRRTPV
                     MIHRAILGSIERFIGIITEEYAGFFPTWLAPTQAVVMNITDSQADYVQQVVKQLSDAG
                     IRVKADLRNEKVGFKVREHTLRRVPYMLVCGDKEIAEGKVSVRTRKGADLGTYLVSDL
                     VEILKNQIKARELKLLGEE"
     gene            complement(69439..70704)
                     /gene="lolE"
                     /locus_tag="PXE50_000059"
     CDS             complement(69439..70704)
                     /gene="lolE"
                     /locus_tag="PXE50_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit LolE"
                     /protein_id="HDL5621004.1"
                     /translation="MSTPFFISWRYQRGKQKNKLVSLIALFSNIGIALGVAVLIIGLS
                     AMNGFERELNNRVLSVVPHAELVSFQGNQPQPIFDSKKLEALIKKSQNVTASSPFVSF
                     TALIENGAQLKIAQVRGVDPKKQDQASQLSQFIPPEQWQAFNQQFQADEDGLILGAGI
                     AKALEVEAGDEVTLLIPQPTEDGKLAQPLRFNLNVTGILRLDGQLDHSYALIPLNKAQ
                     ELMEYQANEVSGLEISLANPFDVQQLEMPQLNGYTQPLYLNTWIDKFGYMYNDIQLIR
                     TVMYIAMVLVIGVACFNIISTLIMAVKDKQGDIAILRTLGANNGFIRRIFLWYGLISG
                     MKGALFGLILGVILSLNLTAIIKAIEAFFEVKLLSDGVYFVDFLPSELHWQDVVYVLA
                     ATIILSLFASLYPANRAAKLEPAKVLSGH"
     gene            complement(70701..71384)
                     /gene="lolD"
                     /locus_tag="PXE50_000060"
     CDS             complement(70701..71384)
                     /gene="lolD"
                     /locus_tag="PXE50_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HDL5621005.1"
                     /translation="MTELLRCEHISKFYDEGEQKVQVLKEVSFSMNEGELVAIVGSSG
                     SGKSTLLHTLGGLDQPSTGEVWIRGQSLQQLSSDKLALLRNQNLGFVYQFHHLMADFT
                     ALENVMMPMLIGKQNKTEAANRAEKMLQAVGLAHRMTHRPSALSGGERQRVAIARALV
                     NNPALVLADEPTGNLDQKTTESIFELIQQLNQEQNIAFLLVTHDLNLANKLSRSLVMR
                     DGVLSEGSL"
     gene            complement(71401..72573)
                     /locus_tag="PXE50_000061"
     CDS             complement(71401..72573)
                     /locus_tag="PXE50_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HDL5621006.1"
                     /translation="MNLTPFFIAFRYFRSKSADRFGRLVTNLASLGIVLGVMALVIVL
                     SVMNGLENMQKTNLLSTLPHAIITPQEGHFAKGEKLALPEFAKQSVVINRANVIIQSS
                     QGINAGQLIGVENATDDPLLVAENIPALLPSGEFKVVIGSRLANKLNVTVGDKLRLMI
                     TENSQYTPLGRVPVQRLFEISGVYQSNREASEFTLFANLADVGRLLRISEDQVQGVRL
                     YLQDPFQVTELSQYFDAERYQISDWREQKGEFFQAVKMEKNMMGLLISLIIVVAISNI
                     VTSLSLMVVDKQGEIAILQTQGLTKKQVMQIFVFQGAIVGVIGSIIGGLLGVLIAYNL
                     DQIILLLNPSIHLPTLISGTQIAVIVGVSMLLSLLCTLYPAYRASKIEPAQALRYE"
     gene            complement(72671..73618)
                     /locus_tag="PXE50_000062"
     CDS             complement(72671..73618)
                     /locus_tag="PXE50_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HDL5621007.1"
                     /translation="MLNIVFLDRTGIPATHDIPRPNFPHTWTEYATTSADQTFERVKE
                     ADIIITSKVLLQRDLLAKLPKLKLIAITATGTNNVDLAAAKELGIAVKNVTGYSSVTV
                     PEHVIGMIYSLKHRLADYHRDLITSDRWATCGQFCYVDYPIHDVRGSTLGIFGKGNIG
                     AEVARLAQAVGMQVIFAEHQGATEIREGYTAFEEVFKQADIISLHCPLTEQTQNLINA
                     ETLALMKPTAYIINTGRGPLIDEQALLEALEQGKIAGAALDVLVKEPPEKDNPLMLAA
                     KRLPNLLITPHVAWASDSAVTTLVNKVTQNMEEFVATGM"
     gene            complement(73839..74693)
                     /gene="kdsA"
                     /locus_tag="PXE50_000063"
     CDS             complement(73839..74693)
                     /gene="kdsA"
                     /locus_tag="PXE50_000063"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012073169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HDL5621008.1"
                     /translation="MTDKIVKVGNIEVANHKPFTLFGGMNVLESRDMALRVCEQYVEV
                     TQKLNVPYVFKASFDKANRSSIHSYRGPGMEEGLKIFQELKQTFGVNIITDVHEIYQC
                     KPVAEVVDVIQLPAFLARQTDLVEAMARTGAVINVKKPQFLSPGQMGNIVEKIAECGN
                     DQVILCDRGTNFGYDNLVVDMLGFGIMKKVSKGCPVIFDVTHSLQCRDPFGAASGGRR
                     DQVTELARSGMAIGLAGLFLEAHPDPNSAKCDGPSALPLSKLEAFVSQMKAIDELVKS
                     FEEIDTSK"
     gene            complement(74783..75649)
                     /locus_tag="PXE50_000064"
     CDS             complement(74783..75649)
                     /locus_tag="PXE50_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB1 family protein"
                     /protein_id="HDL5621009.1"
                     /translation="MDDIIEELLKELEDPKVTISETELKKFLYREILRLTTLIDKNVS
                     EQQVFGQMSALVKKARYNVNGEGDEERINQLLHLVYREWGFHCYYEDYFHTENLLLNQ
                     VIRKRRGMPVSLGAVALYLSAVLDLPLYPVNFPTQLVLRAEIHQPNGATKVRFINPWN
                     GEFLTIEMLNKWLEGEMGFGVEVTPDLLRRAEPQELLERVETVFKMALTREGKYEETL
                     RLIEYRLAFSPEDPYEIRDRGMVLASMDCYQAALEDINYFIDQCPEDPSAEILKMEVK
                     GLQQKSQESVVH"
     gene            complement(75658..76524)
                     /gene="prmC"
                     /locus_tag="PXE50_000065"
     CDS             complement(75658..76524)
                     /gene="prmC"
                     /locus_tag="PXE50_000065"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HDL5621010.1"
                     /translation="MDYREWLTFAEQKLLENSGADPYLNAKFDANLLLQAVTKRSKSA
                     IFAFSETLLSESELAELAEKLARRAKGEPMAYILGYREFWSLPLKVSPATLIPRPDTE
                     RLVELALEYANKRLGNQKMLQILDLGTGTGAIALALASELGEKAQIIGVDFQNEAVQL
                     AEENRRNLGLNQVTFLQSDWFSSLANQQFDLIVSNPPYIDESDENLTVGDVRFEPLTA
                     LVADNKGLSDLQKIIENAPLHLKPQGALMLEHGWKQGNLVRDLFDLHLWEQVETAQDY
                     AGNDRVTKAILK"
     gene            complement(76524..77126)
                     /locus_tag="PXE50_000066"
     CDS             complement(76524..77126)
                     /locus_tag="PXE50_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621011.1"
                     /translation="MRKLGLLAVFTLVLSACSNSTKIEQTILSKQDIVGSWVCAIKYD
                     DLKVSTLDFSEFKANGEMTNFGDISDENFEPIKFTYVTGDKGKWDLKGNRLVIDYDLS
                     ERKVKRTTPKKFLEFLKQEERKASKTAKKLLKYEQGIFNILSDQKNTENSKIILDILK
                     FGHSRMAIQQNMGDKVYSGGCVTADKAEEYLDILKNRNSK"
     gene            complement(77238..78320)
                     /gene="prfA"
                     /locus_tag="PXE50_000067"
     CDS             complement(77238..78320)
                     /gene="prfA"
                     /locus_tag="PXE50_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HDL5621012.1"
                     /translation="MKDSIINKLESLSERHEELQALLGDASIISDQDKFRAYSKEYSQ
                     LEEVVGTFNRWKKLNNDIEEAQLLLDDPDMKDMAAEEIAENKAEIENLEQHLQILLLP
                     KDPNDEYNAFLEIRAGTGGDEAGIFAGDLYRMYSRYCESKRWRIEEMSANESEQGGYK
                     EIIVKISGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEIN
                     PSDLRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKALAVLAS
                     RIVQVEQERQAAEQADTRRNLLGSGDRSDKIRTYNYPQGRVTDHRINLTVYRLDEVMN
                     GKIDELIQPIITEYQADQLAALSEQN"
     gene            complement(78417..79001)
                     /locus_tag="PXE50_000068"
     CDS             complement(78417..79001)
                     /locus_tag="PXE50_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component II"
                     /protein_id="HDL5621013.1"
                     /translation="MLKKLLIIDNHDSFTFNLVDLLRKLDVPAKVVLVEELDLNEVEH
                     FSHILISPGPDVPRAYLQTFAMLERYHQTKSILGVCLGHQTICEFFGGKLYNLNDVRH
                     GQQRTLTQIEPNPIFKGLPKQLKVGLYHSWGILQNSLQNTPLVPTAVCDQNVLMAFKH
                     QHLPIFGVQFHPESFITEFGQQMLANWLEITQDF"
     gene            complement(79064..80671)
                     /gene="rmuC"
                     /locus_tag="PXE50_000069"
     CDS             complement(79064..80671)
                     /gene="rmuC"
                     /locus_tag="PXE50_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HDL5621014.1"
                     /translation="MHFQEIGIYIALAVCVLVGVYLFFLKSRYQRNAYELSQDLGKIT
                     ENFEQIQQKYEVLAQEKNQLEQWAIQQQTKYEAVSERLNERDGQLQRFQQKIELAEQQ
                     ENQLERYINELKERVGSSQAKAESLEEQLQFSQSSLSTKERENQALFSRLNEVQNELT
                     ELRTTLSEKQANFEAQQRNFIEVKQQLNVEFQHLAQQILDEKSKRFSETNQSSLEALL
                     KPFKEQIEGFQKRVNEVHSESLKGSANLEAEIKRVLQIGVSMSEEAQNLATALKGNNK
                     IAGNWGEVQLESALQSAGLLAGEHYQAQESFRDEEGRRFAPDFVVHLPDQKHLIIDSK
                     VSLVAYDQAVRSEENFAISQALDEHCRSLRNHIEGLSKKNYSALLGIKSPDFVLMFIP
                     IEPAYIEAMKHDPQLFNFGYERNVILVSHTTLMPILRTVANLWRIERGNSEAREISEK
                     AGEIYNQVCAVADRLAKLGNTLNTANNQYNQTVTSLVGRQGLLGKVERFQHLSSKASQ
                     IVPQVELIENEVDTIKLEMVSRELLEE"
     gene            80781..81755
                     /locus_tag="PXE50_000070"
     CDS             80781..81755
                     /locus_tag="PXE50_000070"
                     /EC_number="2.6.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component I"
                     /protein_id="HDL5621015.1"
                     /translation="MQDFIHQANHYGQAKRPFFFLIDFEQQKPLIFPLEQAHASGLFF
                     EFFCKSNLEKPVEKPTKAFELSANPIPFSEYQTGFELVKKEIQAGNSYLLNLSYPTAI
                     ETNYSLAEIFAASKAKYKCYLQGRFVCFSPECFVRIENNRIFSYPMKGTINANEENAE
                     QKLMASEKEFTEHNTIVDLIRNDLALVAKNIEVTKYRYVEKVETHRGAILQTSSEICG
                     ELGENWQENIGSILAKLLPAGSISGAPKEKTVSIIQQAELGKRGYYTGIFGYFDGESL
                     ESAVAIRYIAQTSNGLVFHSGGGITSQSVLTDEYNELLEKVYVPISAI"
     gene            81733..82353
                     /locus_tag="PXE50_000071"
     CDS             81733..82353
                     /locus_tag="PXE50_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HDL5621016.1"
                     /translation="MCRFPLFETLSIIDGKVQNLQYHQQRFEQATQEYFGCEPRFSLA
                     DILVVPEASQRGKVRCRIDYNATEFELKFFIYSPKKVERFRLVEVENWDYHLKFSDRK
                     RFDLLPILQNEEVIILNNGYVSDCSIGNLLFLKQGIWYSPQHYLLKGTQLSKLLDEGK
                     VVLAKIAKQDLHQYEKIMLINALNPFEEPRALPCSQIYFCDLDRKS"
BASE COUNT        24120 a        17332 c        16186 g        24732 t
ORIGIN      
        1 gatacctgaa cgtgcatatc cgtggaaatc aaccgctgat gcactggctg cgaacattgc
       61 accactgatt gcaactgcta ggactgtttt tttcataata gaacctctct taagatttga
      121 ttttacttag gttaattatt aattgattag aagattgaaa ataccctcta aaatcagtaa
      181 taaactgaaa ttgttatacc cctttttcaa caaacaaacg tttgcaagct gtaccgtctt
      241 ccttaaataa atggcagcgt tccggcaata taccgatatt cagatcgtcg ccttcattaa
      301 ctaataccac atcgttttga cgataaatta aggttggttg tttgatttca gggatttcaa
      361 ggtggatttg tgtttcattt ccgagcaatt ccacaacttg cacaataccg tgtaaggtca
      421 cttgggtttg atccgaagga actaaatgtt ccgggcggat acctaaagat aagttatctc
      481 ccacattcac cccttcgccg gaaaccggaa tccaaaaatt atgatgattc gcatcaggta
      541 actcaatttt tacccgttcc ggctctaccg caatcacttt taccggtaaa aagttcattt
      601 taggcgagcc gataaaccct gctacaaagc gatttgccgg gtaatgataa agttctaacg
      661 gtttacctac ttgagcaata ccgccggcat ttaataccac gattttgtcc gctaatgtca
      721 ttgcttcaac ttgatcgtgc gtaacataaa tcattgtgcg gtttagtttt ttatgtaatt
      781 tggaaatttc tacccgcatt tgtacacgca atgcggcatc aaggttggaa agtggttcat
      841 cgagtaaaaa tacttccggt tgggaaacca gtgttctacc aatagccacc cgttggcgtt
      901 gtccgccgga aagtgcttta ggttttcgat ctaataaatg ggcaagctgt aagatttcgg
      961 caacttggtt aactcgttga tcccgctctg ctttacttac acctgccagc tttaagccaa
     1021 aagacatatt ttcggcaacg tctaaatgtg gatagagagc ataggattgg aacaccatac
     1081 cgataccacg ttttgaaggc tctacttcat tcatcagttt tccaccgata tagagttctc
     1141 ctgtcgtaat atcttccaaa cctgctatca ttcgtaatag cgtagatttg ccacaacctg
     1201 acggtccaac gaaaacaacg aattctcctt cgttaatttc taaattaata tccttagaga
     1261 tatgaacatc accatacgat tttcccacgt tacgtaatga tacattcgcc ataactaaac
     1321 ctcttttctg cttttgcttg ttggttttat ttaggctgaa tagtcgcctt tttatctaaa
     1381 gaagaaatca tcctaaaata ctttttttta ggctgaatag tcgccttttt atctaaagaa
     1441 gaaatcatcc taaaatactt ttttttaggg ttagagccat agccataatt atttaaaaaa
     1501 cgccaattca gaaaaattaa ataaattttg tgatcaacct ctcattttta atgcctattt
     1561 ttgtgaagca gatcacaaaa tgataaaaaa tgttacttag atcatacttt tagcttgggg
     1621 ggcgtagagc aaagggtgat ctcaaataga ttgtatagcc cataatttgc cataatttaa
     1681 taaatgggtt gtttcatatc cgtttctttt atttaacttc aaggagtttt ttatgaaaaa
     1741 caaatgtgtc aaattcacct tagctactct tgctacctta gttctttcag gaacagtaat
     1801 ggcaaaaatg acggaaggta aactcgttat ctggattaac ggtgataaag ggtacaatgg
     1861 gcttgccgaa gtcggtaaga aatttgaaaa agataccggt gttcaagttt tagttgaaca
     1921 cccggataga cttgaagaaa aatttgcaca ggttgcctca actggtgacg gtccggatat
     1981 tatgttctgg gctcacgacc gctttggtgg ttatgcacaa tccggtttat tggctgaagt
     2041 gaatgtaagc aaagaattta aagataaatt tgtcgatttt gcttgggatg ctgaaactta
     2101 caacggcaaa attatcggtt atccggttgc gattgaagcg atttcattaa tttataataa
     2161 agatttagtg aaagaagcac caaaatcttg ggaagaaatt attgagttag ataaaaaact
     2221 caaaaaagag ggcaaaaatg ccattatgtg gaacttatcc gagccctatt tcacgtggcc
     2281 gattgcggct tcaaacggag cttatgcatt caaatttgct aacggcaaat acgatccaaa
     2341 agatattggt gtgaacaatg aaggggcagt aaaagcacta caatttgtag tcgatatggt
     2401 gaaaaataaa catattagtg cggatatgga ctatgccgtt gccgaagcct cctttaataa
     2461 aggacaaagt gccttaacca tcaatggtcc ttggtcttgg ggcaatattg ataaaagcgg
     2521 tattaaatat ggtgtaactt tactcccaac attaaacggt caagcttcta aaccattcgt
     2581 aggggtgtta agtgccggtg taaacagctc aagcccaaat aaagatttag ccaaagaatt
     2641 cttagagaat tatttactca ccgacgacgg tttagatgca gtcaataaag ataaaccttt
     2701 aggtgcggtg gcgttaaaat cttaccaaga gaaattagcg gctgatcctc gtattgctgc
     2761 aacgatggca aatgcgaaaa acggtgaaat tatgccaaat attccgcaaa tgtcttcttt
     2821 ctggtatgcc gaaaaatctg ctatcaataa tgcagtgacc ggtcgtcaat cggtgaaaga
     2881 agcattagat gatgcacatt cacgcattca aaaacaacaa taattcttca tcattctgag
     2941 tgggttatta tgacccactc tatttttaga ttcaccctaa atacaataaa agtacagtaa
     3001 aagtaccgta acaaaatgca gtaaaaattc gaggtgctgt tatgctaact caaactcaat
     3061 ccaaatccac tcattggctc aaatatctct tagccggatt agtcttgctc cttgacttct
     3121 atcttgttgt cttaatgtac tcacaaggtg aatatctttt tgctatttta acgctgatta
     3181 ttctaacttc cggtgtctat atttttacca ataaaaatac ctatgcttgg cggtatgttt
     3241 accctggcat taccggaatg gcaattttta ttttgtttcc gctggttgcg actattgcaa
     3301 ttgcgtttac caactatagt ggttctaatc aattatcctt tgaacgagcg gtatccgtct
     3361 taactgaaca acgctatttt gccggagata aatatcaatt caccctttat ccgcaagcag
     3421 ataataaata tcaaattgca ttaaccaatc cgacgacaga gcaaactttt gtgtcagagc
     3481 cgatttcatt ggctaccgga acgaatgtgg ttgtaaccga gcaaaacaga ccaactggcg
     3541 aagtcgctcc ccttaaagtg attacgcaaa atcgggccgc acttcaatca atgaaagtgg
     3601 ttttaccgaa taataatgaa ctgacaatga gctcattacg tcaattctcc gagcaaaaac
     3661 cacgctatca atttgatgaa gaaaataaaa tattactcaa taatgagact ggcaaacgtt
     3721 atcaagcaaa tgacgaaacc ggtttcttcc aatcgattga tgaaaacggt cattggcaaa
     3781 gcgaaacact tgaaccaggt tatactgtca catcaggctt taataacttc attaaaattt
     3841 ttaccgatga aggtattcaa aaaccttttg tccaaatatt tatttggacg gtgatcttct
     3901 ctttattaac cgttgtcttt accgttattc tcggtatggt tcttgcctgt ttggtacaat
     3961 gggaggcatt aaaaggtaaa gcagtctatc gtgtcttatt gattttacct tatgccgtac
     4021 catcatttat ttcgattctg atttttaaag gactatttaa ccaaagtttt ggtgagatca
     4081 atatgatttt aaaccaacta ttcggcatca gccctgaatg gtttaacgat ccgctccttg
     4141 ccaaagtgat gatcttaatt gtcaatacgt ggttaggtta tccttatatg atgattttat
     4201 gtatggggtt actcaaagct attccggctg atttatatga agcctccgca atggacggtg
     4261 cttccacttg gcaaaacttc agtaaaatca ctttcccatt actgttaaaa ccacttactc
     4321 cgttaatgat tgcttcgttt gcatttaact ttaataactt tgtattaatt caactattaa
     4381 caaacggtcg cccggatatg attggaacaa ccactccagc cggttatacc gatttattag
     4441 tcagctacac ctatcgtatt gcctttgaag gaagtggtac gcaagatttc ggcttagcag
     4501 ccgccatcgc aaccattatt ttcttattag tcggtggctt ggcactctta aatatcaaag
     4561 caaccaaaat ggaattataa aagcgggagg gatttaacaa tcccgacccc aaactaactt
     4621 taggagttat atatggcaat tgttcaatct aaatctgtgc gttatcgggt atgggcaacc
     4681 catttcatct taatctgttt ccttgcctta attattttcc ctttattaat ggtgattggc
     4741 atttcgttac gaccgggaaa tctggctatc ggtgatatta ttccaagcca aatttcgtgg
     4801 gaacattggc aagccgctct tggttttgat gttacacacg ccgatggtac agtcacaccg
     4861 ccgccattcc cggtgctacg ctggttatgg aactccatca aagtggcaac aattacctct
     4921 atcggcattg taaccttatc tacgacctgt gcttatgcat ttgcccgaat gaaatttaaa
     4981 ggcaaaaaaa ccattctaca aggtatgctg attttccaaa tgttcccggc agtgctttcc
     5041 ttagttgcct tatatgcgtt gtttgatcgt cttgggcagt atgtaccgtt tcttggttta
     5101 aacacacacg gtggtgttat ttttgcctac ttaggcggaa ttgccttaca cgtttggaca
     5161 atcaaaggct actttgaaac gattgatggt tcattggaag aagccgcttc ccttgatggt
     5221 gcaaccccgt ggcaagcgtt ccgattaatc ttattaccgc tttcagtgcc gattttggcg
     5281 gtagttttca ttctttcatt tattgccgcc attaccgaag taccggttgc ctcactccta
     5341 ttgcgtgatg taaacagcta caccctagcc gttggtatgc aacaatacct ctatccgcaa
     5401 aactatttat ggggtgactt cgcagcagcg gcggtcttat ccgcaattcc gattacgctg
     5461 gtcttcttat tggcacaacg ctggttaatc ggtggtttaa ctgccggcgg cgtgaaaggc
     5521 tagtttgcaa aaaattctct aaaaacgacc gcttgtcgag ctgatactgc ggtcgtcaat
     5581 ctttattagg gctgtctatg aaaaatgcgt taccttatct ctgcttattc tatacctcaa
     5641 gcctttttgc ccaatcttgg caacattccc atttttctga ttttaacgat gatctcgaaa
     5701 aacatttttt tcaatcccaa gttcaattgg aaaaagggag ctatccgctt aggttcaaat
     5761 ttggcgaaca atgttatcaa ccccaacaag cgataaaatt aaatcaatcg gttgcgttag
     5821 tcccttgtat aaatgaagct ccacaactgc ggttgtttcg tcaaggcaac tatctggcac
     5881 aaattgatct gcgaagcggc actccgacac ccacaatcag cgtagaacag cagctacagc
     5941 acaatgaagc gatgtttcaa agttgcccga attgggataa aaaaccgatt gaaattgatg
     6001 tttcttccac ttttgccgaa ggcgaatcgg ttagcgattt ttattcaggc aacaccgcta
     6061 tcgttaaaaa cggcaaagtc accttaatgc ccaatgaaaa cgcaagcggt ctgattttgc
     6121 tggaaaaaag caataccgaa aatacggcaa cgtttgattg gaaaaatgcc accgtctatt
     6181 ttgtgctgac cgaccgcttt tataacggcg atccgaccaa tgaccacagc taccaccgcc
     6241 aaaaagacgg aatgcaagaa atcggcacct ttcacggtgg tgatttaaaa ggattaaccg
     6301 aaaagctcga ttacctacaa caacttgggg taaacgtatt gtggattagc tctccgttag
     6361 aacaaatgca cggctgggtt ggcggcggtg ataaggggga ttttccgcat tatggctatc
     6421 acggttacta tcatttagat tggacgaaat tagatgccaa tatgggtact gaagacgatt
     6481 taagtcgctt tgttcaacaa gcccaccagc gtggtattcg ggtgctattt gatgtggtga
     6541 tgaaccatac cggctacgcg acgcttgccg atatgcagga gtttaacttt ggcggatttt
     6601 acttaacacc ggacgaaatt agccgcacat taggcgaaaa atggacacac tggaagccga
     6661 aatcaggaca aaattggcac agtttcaatg atttcattcg ctttaacgat aatcaggctt
     6721 ggcaaaattg gtggggaaaa gaatgggtta gagctgatat tgccgattac gacagcccta
     6781 aatttgatga tttaaaaatg tcgctcgctg cccttcctga tctaaaaacc gagagcgaac
     6841 aagcggtcaa attacctgaa ttttttgcaa ataaaaatac caatgccaaa acattaccaa
     6901 acgccaaagt gcgtgattat ttaattggtt ggttatccga ttgggtcaga aaatatggca
     6961 ttgacggttt tcgggttgat accgccaaac acgttgaaaa atccacgtgg ctggtattaa
     7021 aacaatcggc acaacaagcc ttaaacgaat ggcaaaaagc caatccgaac gccggtttta
     7081 acgatcgctt ttggatgaca ggagaagcgt ggggacacgg cgtgttcaaa agtgactatt
     7141 atcaaaacgg ttttgatgca atgatcaatt tcgattttca agatcaggct aaacaagggt
     7201 taaattgctt tgcccatatt gagccgattt atgccgaaat gaatcgcaaa ttaagcgact
     7261 tcaatgtgtt gagctattta tcttcacacg atactcgatt atttttccat tcggatagtg
     7321 aacaaaatat cgaaaaacac aaaaccgccg caaatttgct gttgctttca cccggtgcag
     7381 tgcaaatcta ttatggtgat gaaagtgggc ggacatttgg tgcgaccggt tcagacctga
     7441 tacaaggcac ccggtcggat atgaattggc aagagttgca gcaagatcct cagaaacagg
     7501 cattgcatca acattggcaa aaattgacac aattccgcca acgccatccg gctattggcg
     7561 caggtgtcca tcaactcatc aaaaatgata gctactttgc atttaagcgt gtgttgaatg
     7621 aagataaagt gatggtggtt tgggccggaa attaaatcta ctttagcttc aagttttctc
     7681 tcttctgggg aaaacttgaa gccggttcgg ggaaacaagt tgcaaaaaat tactaaaaat
     7741 agaccgcttg ttccccatga gcttgtgatc aatgataccc catcaacatc agcagttctt
     7801 tcgtatagct gattgcttcg ttacgattcg tcacaccgat tttctgataa agatttcgga
     7861 tatgggtttt aatcgtggtt gcagccactt gcaattcatc tgaaatttgt tcattgctat
     7921 atccggagta aatcaaaccc aatacttgcc attcccgctg agtgagcgga ctaattttta
     7981 agagttccgg cactttcgga tttttcaata attgattcac aaagttttca tcaaaatggg
     8041 caaatttttg gcgataaaat tgattgatgt tgcgtaaaat aaactgtgct ttgtgcaata
     8101 ccagttcatc tagcacatta agttgcaata aatggcggat ctgctgtgcc attacatccc
     8161 cttcaatcac aaacgcactg ataaaattcg tttggcgggt gagttttagt gcctgaatta
     8221 aatcttgctg agccaattct ttctcgcctt gtaaaaaata aagccggtta cgaacaatta
     8281 atgcgcgatt taaatcgcta atcagagaaa atttttcagc cgtttcaatt aaattatcta
     8341 aaatggcttt cgcctcgtga tattcctcaa gcaagattcg agaccgtgca atatttcgcc
     8401 attgcacttg ggtaaaatga tttttatctg aaaccggtga ggggttttga attaaccagt
     8461 tcctcaccgc agaaacgtca ttggtcatct gccaataaaa tatacgtacc tgatcggcgt
     8521 tggcaatcca atcgtggtga taagaatgag aatgttctaa ttgttcgacc tcgcctaata
     8581 atcgggcagt gttatccaaa ttgcctcgag ccaacgagat cttcgtgagt aaagttaagc
     8641 attgtaactt atcttcaaat ttagataagg cattcattcc ggcaactgcc attgattcag
     8701 ctttatctaa gttataccat tcccataaaa tcttgccttt agaacgtagc aaaaattcat
     8761 acatcggcac tttttgtaga tggttttctt tcacaaactc gcttgcttta tctaacattt
     8821 cataggctgc ttgtgaaaac ccttgggcaa gcaaaatttc agattgttga agctgtgacc
     8881 acaaaatatt gtggtaagta tgatgctgac gtgccatacg ctctgctttt tgcaacattg
     8941 ctaatgcttc tgccagattg ccgtggcaat gatgagcttc gccaataata gacgttgcaa
     9001 caatatgagc ataataggca ttttctgaaa gatcgtttaa cgcttcagac gctaattgaa
     9061 gtgcggtatt ctcatcaccg gaattgatag caacttgtgc ccgtagcaca ttaaattccg
     9121 cattggcagt tttgctcaat tcaattttat tttcagttaa tgcacgagaa aaatccgcta
     9181 aaataccacc tacttcaata tggcggtgct ggctttgtac caaccaggct ttgagtaaca
     9241 ccaaattagt atgttcggtt aaatgggcgt aatctaagca atttaagctc tcttccaata
     9301 atttgagttc tccttgatga aacaccgtcc aagcgtgttt gctcaaaata ttgagtagta
     9361 atccggtatc cgataactgc attgcgtgat gtaaggcttc tgtaacatag cctaattgta
     9421 accacgcatt cgccgccttt tgatgcagtt gcggtaattc agcatataac tcattttggc
     9481 aacataaatt taaaaaggaa gcaaaaagcg gatggaattt ccaccagcta tcatcactac
     9541 tctgccactt actgtttgcc atttgttgta aaaacaaacc ttgcttttcg agagactcta
     9601 atttggtgcg actgttttgc tcccctgtaa cagcctgcac taaagactca ttcattgaat
     9661 gcaaaaccga acaacgcaaa ataaacaaac gagtctcttc atcgacttta ttaagcactt
     9721 catcggctaa atattcgtta atatgaaaat ggtttgattt ggctaaacgt ttggcaatat
     9781 cttgcagtgg tacttgtagc gtgtgtgatt tattttttgc aaaaaggcta attagctgaa
     9841 gggctgtggg ccacccttca acttcgttac acagtgcgat aacatcttgc tgatttaact
     9901 ccgaacctaa tcttgcttga aaaaaagcgg tactttcttg gtgatcaaac attaactggt
     9961 taatatcaat ttccaataat tgttcttgca ctcttaaact ggcaatactt aacgggggaa
    10021 ttgatcgaga aatcaagata agcgtcatat tagacggttg atgtttaatc caatatttta
    10081 atgcttcgtg aatttcatca ttttcaataa tatgataatc atcaatagca agataaaaat
    10141 gctctgaaaa tgccgcggct ttaatcaata attgattaaa taaagctaat aaattagctt
    10201 tacgattttc ctctaacaat acgtctattt cttcattgat tgctgaatgc aatgccgcac
    10261 taaaataagt ggcaaaacga tctgaattat tatcgccttc atctaacgca taccagccga
    10321 tattcttttt attttcaatc cattgggaaa ccagagtggt tttgccataa cctgccggtg
    10381 catttatcaa tacgaccgga taactgcaag atttgtctaa ttcttgaatt aaacgttttc
    10441 gaggaatgct gttttgtaat cgaaaagaac aaacaagttt tgatggtatt aacataataa
    10501 attcaatttt ctctcataac aaaataggga tgatatatcc accatttgtg ttctcactac
    10561 ttccttataa tcataccata caagatgatt attgggatga tttgatttta tttggatttt
    10621 acataatagc gacattcatc tttaaccggg ggtttcctat gacatttaat tctattgtag
    10681 aaaaatactg tcgctacttt gatgtgacag atccaaaaca ctttacctta cagcagtggt
    10741 atcaagttgt tgctgaaggt tcccttgagc taatttatag ccagcctgca accaaaccga
    10801 cagaatcacg ccacgtgaac tacctctcaa tggagttctt aatcggtcgg ttaaccggca
    10861 ataatttaat gaatttaggt tattacgaac aaattcgtga ctatcttaaa caatatcaag
    10921 ttgaattagt agatgtttta gaacaagagc gtgatccggc attgggtaat ggcggattag
    10981 gtcgtcttgc tgcctgcttt ttagattcga tggcaactgt cggacaaaat gcaaccggct
    11041 atgggcttca ttatcaatat ggtctgttta aacaaagctt caaagaggga atgcagaaag
    11101 aagcagcgga tacttgggct cgtgacagct acccgtggca tcgttttaat ccgtctaaaa
    11161 cccgccatat cgggtttggt ggaaaaatca aacatatcca agccgatcaa tatgaatggc
    11221 agcctaaatt gaccattcaa ggcaaagcct ttgacttgcc gattgtaggt tataaaaaca
    11281 acatcattca accattacgt ttatggcaag cagatagtga ccaatctttt gattttgatg
    11341 cctttaatga gggtaaattt ttaagtgccg ataaaacgat tgtcaatgca gccgcactaa
    11401 ctcaagtgct gtatccaaac gacaaccatc aagccggaca aaaattacgc ttaatgcagc
    11461 aatacttcca ttgtgcctgc tcggttgccg atattttaga tcgtcacatt agcgaaggtt
    11521 attcgttaga agatttagca aaacgccaag ttattcaact caatgatacc catccaacgc
    11581 tcgctatacc tgaattgatg cgtgtactgt tagatgaaca tcaattcact tgggagcagg
    11641 cttgggatat ttgcagcaat acctttgctt acactaacca taccttatta cctgaagcac
    11701 ttgaacaatg ggatcaacgc ctatttaagc agctattacc tcgccattat caaattgtgg
    11761 aaaaaatcaa tgatattttc cacgacaaag tacaggcaga atttggtgat gatgcaaaaa
    11821 tttgggaaaa attagccgtg ctatttgatt accgtgtgcg tatggcaaac ctctgcgttg
    11881 tcacctgctt ccgtgtaaac ggcgttgcgg aaattcactc cgatctctta gtgaccgatc
    11941 tattcccgga ataccacaaa ttattcccaa caaaattctg caatgttact aacggcatca
    12001 cacctcgccg ctggattcga caagctaatc cacaattaag tgatttattg gatcgtacct
    12061 taaaacaaga ttggacacac aatctggaat tattaaaagg cgttgaacaa tatgcggatg
    12121 acaccggttt ccgtgaagaa tatcaacgca ttaaacgcaa taacaaagtg gttttagcca
    12181 atgaaatcca taaaacatta gggttaaatg tcaatcctaa tgcgattttt gatgtgcaaa
    12241 ttaagcgttt ccacgaatat aaacgccaac atttgaattt gttaaacatt attgcgacct
    12301 atcaatcgct aaaagctaac ccgaaccaag actacacacc acgtctattc ctattctcgg
    12361 gcaaagctgc accgggttat tatttagcaa aaaatattat tcacgctatt aataatgtgg
    12421 cagatattat taataacgac aagcaggtaa atgatcgact acaagtggca ttcttaccgg
    12481 attatcgagt cagtcttgcg gaaaaaatta ttccagcagc tgatgtatca gaacagattt
    12541 caatggcagg taaagaagcc tccggtaccg gtaatatgaa attggcactc aacggcgcat
    12601 taaccttagg tacgctagac ggtgccaatg ttgaaattgc tgatatggtc ggtgaggaga
    12661 atgtctttat cttcggtcac accgtagaaa gcgtgaggga attattagca aaaggctacc
    12721 aaccgaaagc ctactataac caagatccga ttctgaaaaa tgcggttgat ttcttagcca
    12781 caggaaaagc ctctaacgga gataaagagg cattcaagct gatgttagat agcctgttgg
    12841 aacgagatcc tttcttagtc tttgccgact ttgatagcta tcgccaagca caagagaaaa
    12901 ttggtgtagc ctatttagat caagaaactt ggctgcgtag tgcaatttta aatactgctc
    12961 gtttgggtgc atttagctca gaccgctcaa ttaaagatta tcaacaacgt atttggttga
    13021 atagataata aattcgggcg acttctacaa taaaggaagt cgcctatttt ctgctgtatt
    13081 tcatatgtat ttatatatgg agagaaatga tgaaaataac tgccaaacaa tattatcggg
    13141 ctggaattat gccctatttt ttcgatgagc gtggtgtaaa aaaaacagca tctgaaaaaa
    13201 taaaacattc gttattcaaa gcctttaacg gcaatactca agcaagagaa acacctatcc
    13261 ctacggtcaa cattttttac cagcaccaac cctgtttttt accttttcat ttagcggata
    13321 aaaaacatcc gttaaccggt acttggcagc tacaactaga aaattcaaac caaattattt
    13381 ccggcaaaat taaagcaagg ggaattacat tacctcaaga tttgccctta ggttatcacc
    13441 aattacagct aaaaacggta gataaaacct ttaattgcac cattattatc gctccggaac
    13501 gctgctacca accacaagcc gtcattgaac aaaaaagatt gtggggaacc ttcctacaac
    13561 tatacacctt aaaatcagcc cacaactggg ggattggcga ttttggcgat ttaaaagact
    13621 tcattcaaca gattgcccct taccaagcag attttatcgg cttgaacccg attcactcac
    13681 tttttccggc aaacccgaat tctgccagcc catacagtcc atcctctcgc cgatggctga
    13741 atattgctta cattgatatc aatcagctag cggaatttca acaaagtgat gaagcacaaa
    13801 cttggtttca ttctgctgaa atccaacaac aattatcaga attacgcact caggattggt
    13861 tgaattacga gcaaatcatt ccgttgaaat tgaaagggct acgctttgct ttcgcaaaat
    13921 ttcagcaaaa tatgaccgct tgcgctgccc ctgcttttat cgaatttgta caaaaaggtg
    13981 gtgaaagctt acaagttcaa gccacatttg atgcccttca tcagcatcta tcggcacaat
    14041 ttgccgacca atggggctgg gatttctggg agaaagccta ccaagactac cactccgcag
    14101 ccgtgcagca atttagagaa acgcataaaa ccgacataga attttacctt tggttacaat
    14161 tcgttgccga tcaacagcta gcagaatgtg atgctatctg ccgtcagcaa aatatgcgta
    14221 ttggtatgta tcgcgatctc gccgttggcg tcagcccgaa tggtgcagaa acgtggaatg
    14281 acaaacaact ttattgctta aatgcctctg tcggcgctcc gcctgatgta ttaggtccgc
    14341 aaggacaaaa ctggggctta accccaatga atccgcatgt attaaagcaa caagcctacc
    14401 gtccgtttat tgagttagtc agagctaata tgagtcattg cggtgcatta cgccttgacc
    14461 atattatgtc tttactccgt ttatggtgga tccccaaagg cgatagtgcg gttaatggtg
    14521 cttatattcg ttatccagtt gatgatttaa tcgcaatttt ggcacttgaa agccaacgcc
    14581 accaatgcct aattatcggt gaagatttag gtactgtgcc aaaagaaatt gtgagcaagc
    14641 tcaaaaatgc ggggatttta tcttacaaaa ttttctattt tgaatttgat gaacaaggga
    14701 agagtcgaga cttacagcat tacccttacc aagcaatgac cacattaagc acccacgatt
    14761 taccgactat caatggttat tggcgtggct atgattttga attaggcgaa aaattcggcg
    14821 tctatcctaa ttcgaatatt ttggcaatcc ttaagcaaga tcgagtcaat gccaaagcca
    14881 aaatcttaca acgcttacaa gaacataacg tagagatcgc acctgaaatt agcgagcaac
    14941 ttaattctcc ggtgaatacc gcatttattc actgtttaca aacctatgtt gcaaatgtaa
    15001 gcagcggatt attcggcttc caacccgaag actggttggg tatgactgag ccggttaaca
    15061 ttccgggaac cagtacacaa tatgcaaact ggcgacgtcg gcttagtgtt aacctcgagg
    15121 agatcttcac agataaagat attcaagcct tattaaaaga agttaattta atccgtaaaa
    15181 atcaataaaa gttagataag aaaaaaggcg actttccgtc gccttttggg cttatatgct
    15241 tgatgtctat ctttatccac ctgaaaccca caacataatc gctagcactt gaggtagcat
    15301 aatacgcaaa aacattacta gtgggtaaac agttgcatag gataacgctg cagcgccatt
    15361 tccctcttta atttcattgg caaaagcaag cgctggagga tcagtcattg agccggcaag
    15421 taatccacaa atcgttaaat agtttacttt gttatacatt ctggcaatca atcctgctat
    15481 catcaatgga acaaaagtaa taatcgcccc atagcatatc cactcaacgc cctcactgct
    15541 taatagcgtt tcgagaaatc taccgccaga ttttaaacca actaccgcta aaaacagtac
    15601 aataccgatt tcacgcaatg caagattggc acttggtggc ataaaccagt agagtttact
    15661 gaaactacca attcttgcaa gaataagagc aaccaccagt ggtccaccag ccaagcccag
    15721 ctttaacgca acagggaaac ccggtaaata aatcggtaca gaaccaagta atactcccaa
    15781 accgatcccg ataaatattg gcaacatttg gacttgttgc aactttgagt gcgcattgcc
    15841 gataatcgtc attaccattt caatatcagc ttgccgccct actaaattga gaacatcacc
    15901 aaattgtaac gtcatatcac ctgttggtac taattctaca ccggctcgat ttaaacgaga
    15961 aatgacaaca tcgtatttgc ctttaagcat tagctgacga atttgtttcc cgaagacttt
    16021 ttcattcgtc actacagcac gttcagaacg gtaaatcgtg cctttggttg agacagatac
    16081 atctactgcc tcacctaaaa taatctgcat ttttcgtaat gaggattctt cacctactaa
    16141 gtgtaaaata tctcctatct gtagaatcgt atctacacgt ggaatagaaa gctcattccc
    16201 ccgttttaag cgtgaataag ctacttcgtg caaattaaaa tcaggaattt gtttcaacgt
    16261 taaaccgtga atatttggat tagtcagacg gacatttaag gtactaagtt gatctttact
    16321 tctattttgc tgtttgttaa aagcctctgc ttccgcctca atattgattc gaaataaaat
    16381 ccgaatcagc cacattgaaa gtagaattcc gataatgccg aacgggtaag caatcgcata
    16441 actcattccc ataatttcag ttacactctc agcgcttaac tcagccaata cctgttgacc
    16501 tgctcctaaa gaaggggtat tggttacagc cccggagaaa atgcctaaaa tcacaggcaa
    16561 aggaacattg aagaatttat gaataagaat aactaaaata ccgctaatca gtacaatcag
    16621 taccgcaaaa ccattgagtt ttaagccaga atgttttagt gaggcaaaga atccaggtcc
    16681 tacttgaatt ccaattgaat aaacaaataa aatcagcccg aactcttgaa taaaatgaag
    16741 cgtatgggca tcgagcttca catcgaattg cgccataaaa tgggagacaa acagcccacc
    16801 aaataacact ccccctatac ctagccccac gcctctgatt ttaatatggc caatccataa
    16861 gcctagaacg gccactaaag ataataaact gacagtaagt gcaatttcgc tcattacagc
    16921 ctctctttaa tatgaaatac ctcaaaaatg gtatccaatt ctaccaaatc tcaaaaacga
    16981 aaaatgagat ctatgtcaaa aaaataaaat attgatagta ttactccaag atgaacttca
    17041 aaaaagttcc tgaatttaaa aaaaattctc gacaatactt ttttttacag taaattaaac
    17101 aattatttaa ataacctaag gatcaaacac aatgttatca aacgaagtct ttatttcgat
    17161 tatcgtgctg ttaatcctaa gcttgcttag aattaatgta gtaatcgcac ttattatttc
    17221 tgcccttact tgcggtctaa tcggtaatct tggtgtagaa ggggctggat ttaccgaagc
    17281 attggaaaaa acaataaaaa gttttactgg tggtttaggt gggggtgcgg aaactgctat
    17341 gaactatgcc gttcttggtg cgtttgccgt agctctatca aaatcaggcg tgaccgattt
    17401 attagcctat aaagtgatca aatcctttgg tcacagcccg tcaggtcgct ccgttacttg
    17461 gtttaaatac attgtattat ttgtgttagt ggcatttgca atgtcatctc aaaacctaat
    17521 tccaattcat attgccttta ttccgatttt aattccaccg ctattaagcg taatgaataa
    17581 attgcaaatt gaccgccgtg cggtagcttg tgctttaacc tttggtttaa ccgccactta
    17641 tatgttaatt ccggcaggtt tcggtcagat ctttattgaa agcatcttag ttaaaaatat
    17701 caaccaagca ggtgaaccgt tccaattagt gactaccaca gcggaaatga ccaaagcgat
    17761 gttaattcct gtttccggta tgattttagg cttactgttt gcattctttg tgtcataccg
    17821 taaaccgcgt gtgtatattg aaaatatgcc tgaaccaacc gcagatgata ttgaagcccg
    17881 tgttgcaaac gttaagccct tccatatcgg cattagtatt gtggcgatta tcgcgacctg
    17941 ttcggtgcaa ttagcaacaa attcgactat tatcggcggc ttagtcggtc tggttatttt
    18001 cgccttaggc ggtgtattta gactgaaaga gagtaacgat gtcttccaag ctggcttacg
    18061 tttaatggcg atgattggct ttgtgatgat tgccgcctcc ggttttgccg gcgtggtcaa
    18121 ttcaacaggc ggtgtgccgg cattggtaga aagcctgcgt gatgtgattt catcaaaaga
    18181 aatggcagca ttgctaatgt tagtcgttgg cttatttatt acgatgggta tcggctcttc
    18241 attctcgact gtgccgatca ttacctcaat ttatgtgccg ctttgtatct catttggctt
    18301 ctcgccactg gcgacaatgg cgattgtcgg tgttgctgct gcactcggtg atgcaggttc
    18361 tccggcatca gattccacac ttggtccaac ctccggcttg aatgctgacg gtaaacacga
    18421 ccacatttgg gattctgttg taccaacttt tatccacttt aacattccat tattagtgtt
    18481 cggctggatt gcagcaatga cactttaagc tataatatgc aaaatttttg ctaaaaatga
    18541 ccgcttgtag ccattacaag cggtctattt tcttctttat tttgcaaacc acattaggat
    18601 caccaatgaa atttatctct tttaatatca acggattacg agccagacca catcagctcg
    18661 aagcgattat cgaaaaacac cagcccgatg tactcggctt acaagaaatc aaagttgccg
    18721 atgaagattt tccttacgat ttagtcaatc acttaggcta ccacgttttc caccacgggc
    18781 agaaaggtca ttacggcgtg gcattactga ctaaaaaaga gcctatagcg gtgcgtaaag
    18841 gcttcccgac agatgtactt gatgctcaaa aacgaatgat tatggcggat atcgagaccg
    18901 atttcggcgt gctaaccgta ttaaacggct atttcccaca gggggaaaat cgcagccacg
    18961 aaaccaaatt cccggcaaaa caaaaattct atgctgattt gcagaactac ttggaaagcg
    19021 aattaaagcc ggaaaatccg attattatta tgggcgatat gaacatcagc ccgactgatt
    19081 tggatatcgg catcggcgag ccaaaccgca aacgctggct gcgtgacggt aaatgttcat
    19141 tcttacccga agagcgtgaa tggctagatc gcttatacag ctacggcttg gttgatactt
    19201 tccgtgcagg caacccagac gtgaacgata agttctcttg gtttgactac cgttcaaaag
    19261 gttttgatga taatcgtggc ttgcgtattg atttaattct tgcttcaaaa tcacttgctg
    19321 agcgttgcgt ggaaacaggc attgatttag acattcgagc aatggaaaaa ccgtctgacc
    19381 actcccctgt ttgggcaacc tttaaataaa gttgcaaaaa aatctgagtt ttcaaccgct
    19441 tgtcagtttt tagccctaca agcggttatt ttttctcact tttttgcact ttttacgctg
    19501 tactatatcc ctattcaaat ctgtgctaca atcaaacact atttttagat tatttttgga
    19561 ttatgaacaa acgtttaacc gttattttac tgattattgt tgccgtactt ggtggctggt
    19621 attacagctt acaagagaaa gagaatacgg ggcttgatca gcttattaaa aaggaaggac
    19681 agcctgaata tgtggggaat aaaatgtcca ccacggtcta tgatctaaaa ggaaacccac
    19741 aatatttcgc tcaagctact gaaattaaac gctatgagtc tactgagcgt actgagtttt
    19801 ttaaaccttt tattgagctt tttgccaaag agtcgacgca aaaacagtgg aaagtcagtg
    19861 ccgattatgc agaaattacc aaagaaaaaa tgttaaattt aaaaggtaat atcaaacttg
    19921 ttgcattaga tcctgcatca cgtttgcaac aaatcactac cgatacgtta actgttgatt
    19981 taaatacaca ggatattttt accgaaagta cggtcaaatc gataggttcc ggttttacta
    20041 caacgggggt tggattaaaa ggtaacttaa aacaacaagt tgcgactttg caaaaagatg
    20101 taaaatctta cattgaaccg accattattc aagaaactaa agaataattt gcttggaaca
    20161 aggaataaca atgaaattaa tgtttaaatc tattttagtg agcgtgttac tgggtagcag
    20221 cttttccgct tatgctctaa aaggcgatac cgatcagccg attaatattg attcaggtag
    20281 ccaatcgtta gatatgacta acaatatcgt gacctttagc gataatgtcg ttatcactca
    20341 agggtcgatt aaagtgaccg cagcaaacgt caaaattacc cgtcaagaag gtaaaaaaga
    20401 aactattgac gctacaggct cacctgtaac attccaacaa accttagata acggtaaacc
    20461 ggtaaacggt aaaggcaaca gcgttcatta tgatttaaac tctgaatttt taacgctgat
    20521 tggcaatgcg gaactcaaac aacaaggtag ctttattaaa gccaataaaa ttacctatga
    20581 tgtgaaaaaa caacaactta aagctaccag tggcggtaaa acccgagtga aaaccgtgct
    20641 aattccaaat gaacttcaag ataacaagaa aaaataaggt taaatgatat gtctgtgctt
    20701 tatgccgaac atttagcaaa aagctataaa caacgccaag tggtaaaaga cgtcagcctg
    20761 aatgtcaaat caggtgaaat cgtgggcttg ctcggtccga acggcgcagg taaaaccacc
    20821 actttctata tggttgtggg tttggttcgc cacgaccacg gcacaattcg tattgacgac
    20881 caagatatca gcacactacc aatgcacgac agagcaaaac aagggattgg ctatctaccg
    20941 caagaagcat ctattttccg ccgtttaagt gtgtacgata acttaatgtc ggtattacaa
    21001 gtgcgtaaaa atatcaatga taaacagcgt aaagagcgtg ccgaagagct gattacagaa
    21061 ttccatattg agcatattcg caatagttta ggtcaatcac tttcaggtgg tgaacgccgc
    21121 cgtgtggaaa ttgcccgagc attagcagcg aacccgaaat ttattctgtt agatgaacct
    21181 tttgctgggg ttgacccaat ctcggtaatt gatattaaaa aaattatcgt caatttaaaa
    21241 gagcgtggtt taggggtatt gattaccgac cataacgtac gtgaaactct agatgtatgt
    21301 gaaagagcct acattgtcgg tagcggcgaa atgattgcca gcggcacacc acagcaagtg
    21361 cttgaaaacc ctgatgtaaa acgtgtttat ttaggcgatc aattcaaact ctaaaaaatc
    21421 ccctctttgg ggatttcatc tttagatgaa aaattatgac aaaactaacc gaatttctaa
    21481 gccctgaaaa tgttcgccaa ggtgtactga tttcaagtaa aaaacgagcg ttagaactcg
    21541 tgggtaaaat cgtggctgaa tcaatcaacc aaaccgaaca gcaatctgaa gcactctgcc
    21601 ctattgaatg ctttggcaat ttatttaaac gtgaaaagtt aggcacaacc ggcttaaatc
    21661 aaggcattgc acttcctcat gcaaaattgc ccgcttgcgg tgatattgag ctgactaaac
    21721 cgattgcggt ctttttacaa ctggaagaag cgattgacta cgaagcccaa gacaacaaag
    21781 aagtggattt aatttatgca atgatgtttc cggaaaatag ctgcgaacag tataaaagtt
    21841 gcctacctgc aattgcacag aaacttaccg ataaatcgtt attaaaacag ctccgagcag
    21901 ctgaatccgc agaagatatt tggcaaattt tggtgtatgc tgataatcac ctaaaagatg
    21961 aagaataata ctgaggaaat atggaattaa tcattataag cggacgctca ggctctggta
    22021 aatcggtagc attaagagca ttagaagatg caggttatta ctgcgtggat aatatccctt
    22081 tacctttaat tccaacctta acctactacc ttactcaaga aaatcgttcg gcagtcatca
    22141 gcttagatat tcgtaattta ccgaatacgc ctaatgcgat tgaagaattg cttacccagc
    22201 ttgagccttt aaatgctaag ctgatttttt tagattgcga acgcaatacc ttaatccgcc
    22261 gttatagcga ttcccgccga atccacccgc tttccaccca agacgatctc tcgttagaag
    22321 gtgcattgga tttggaacaa aaattgcttg agcctttggt gcaaaatgca aattatatta
    22381 ttgacaccag tcatctttct tcgcacgaat tagcggaaaa tcttcgccaa atactgcaag
    22441 gctcaaccga aaaagagctt aaaattattt tccaatcatt cggttttaaa tacggcttac
    22501 ctgccgattc cgattacgtt tttgatgttc gctttttacc gaacccacat tggaatccgg
    22561 agcttcgccc aatgacaggc ttagagcaac cggtgattga tttcttagaa cgccaaaccg
    22621 aagtgcataa ttttatttac caaacccgca attatttaga aatgtggctg ccgatgttgg
    22681 aacaaaataa ccgtagctac ctaactattg cgattggttg cactggtgga aaacatcgtt
    22741 ccatatttat tgccgagcaa ctggcaaaat atttccaagc aaaaggcaaa aatgtgcaag
    22801 ttcggcataa aagtttggaa aaacaccata aaaaaacatc ttaaataagt aggggctggt
    22861 cctgtgccag ccctcatttc aactatttta gggcgggcac agggcaccgc ccctacattt
    22921 gattttatga aatccgcaga tattgttatt gttggcggcg gtatggttgg gctggctctt
    22981 gccggactgc tcaaagatgt cgattgccaa attaaaatta ttgagaaaaa cacgcccaaa
    23041 tttgatgccg atacgattta ccaccgtgta agtgcgatta atgcttcaag ccaaaaaata
    23101 ctggaacaga ttggtgcttt tcaacacatt ccggctcaac gcctttctcc ttacaccgaa
    23161 atgaaagtgt gggaaaaaga cagctttgct aatatccatt ttgataataa tgataatgaa
    23221 atcaagcaat taggactttc acaacttggc tttattttgg aaaatgcggt gattcaacac
    23281 gcattgtggc aacaggtttc tcaacaagct aatgtagaat atattatcgc cgccccccaa
    23341 actctgggcg tgagcgaaaa cggggcattt ttaaccttag ataacggcga aatgctgtct
    23401 gctaaattgg ttgtcggggc agacggtgca aattcgtggg tgcgtaacca gatgaaaatg
    23461 ccgcttacca gtaaagatta tcaacatacc gccttagtct gtaatgtcaa aacaaccgaa
    23521 aagcacggca aaaccgctcg tcaaatcttt gctgaagata gcatttttgc ttttctgcca
    23581 atggcagatg agcatctctg ctcgattgtt tggtcgctgc caccaaacaa agccaatgaa
    23641 ttaaaaaatg caagcgaagc cgaatttaat aaagccttaa cgattgcctt cgataatcag
    23701 cttggcttat gtgaagtgca aagtttgcgt gaaatttacc cgcttgcagc acgcttctgc
    23761 cgtgactttg cccaacctcg tattgcgttg attggtgatg ccgctcatac cattcaccca
    23821 ttggcgggac ttggtgtcaa tttaggcttt gccgatgcca gaacgctggc aaacgaaatc
    23881 caaaaacagt tggtaaacaa ccaagatatt ggtgaatacc gccatttacg ccaatttgaa
    23941 cgtgagcgta aagcccaagc gatgaaatta ttagccacaa tggaaggatt aaaacagcta
    24001 tttgacggca atcacccgct taaaaaatta ttcagaggaa ttggtttaag cctaaccaac
    24061 cagctgcctt ttgtgaaaaa gcagcttatt cagcaagcta tttacttata aaatgtaaat
    24121 tttttcgaaa taacgtaaag atgaacgatt ttatgaacta atacggagat tacttgtcta
    24181 tttattggta caataaccag cctttattgg cttttatttt tatattcttg aggaattttt
    24241 taatgaacaa attaacaaaa atcagtgcaa ccgctttagt cgcattattc ttagcagctt
    24301 gtgataaacc agcagaaaaa gcaccggcaa cagaacctac aaaaacaact gaagctgcac
    24361 caactacaac agctcctgct gcagaagcag ccaaacctgc tgaaacagct gtagccgctc
    24421 caagcgaagc tgcaaaagca gattaccaaa aattagttga ttggaatacg gcacaagaaa
    24481 gcacaatggc aacagcacaa gcagaactac aaaagaaatt agctacacaa gatcctaaac
    24541 aaattcaaga aggattaagt gcatttaata aaaaagtaga agaaactgta aaaagcttag
    24601 atgcgattga agtatctgat gcacaaatca aaacatttaa agaaaaaaca aaatcagttt
    24661 taacactttc aagtgaagtg atttctgaac aagtaaaaac gatctctaca ccaaatgacc
    24721 aagcagcatt acaagccgta caacaaaaag ctcagtcttt aattgaagct ggtaatgagt
    24781 tacaaaaatt aaacgtagaa ttacagcaaa gattctcagc taaataattt accattcaat
    24841 gaaaagctag agtattttgc tctagctttt ttttgcaatt actaaggatt actatgaaca
    24901 cgctcgctaa aattagccta tctgtattat ttaccctttt tttaaccgct tgcgaacaac
    24961 ctaattctac caaaacacag agctcagcag aatcgccagt tcaagtgaaa gaagagtcaa
    25021 aagaagaagt taaacctgct gataccggcg ctcaagatta taaaatgtta cgggaatggc
    25081 aagacactca agaaaaagcc ttaaatgatg caattaaagc ggcaacagaa acacttactg
    25141 acaaacaaaa agccgattct accttaatgc aagagacagt taataacgca ttattagctc
    25201 aaattgatca tattaagata agtgctgaaa ccctgaatat tcaaaataat gaagtcaaag
    25261 cactaaaaga caaaacctta gaagtcctga ctttaggggc tcagatgatc gtagaaggtg
    25321 ctaaaatgga gaaaaatcct acaccggaag cacataaagc atttggcgag ttacaaacaa
    25381 aattgaatca attagctgaa gaagggcaac agttagaaaa tatattaaga gctaaatatg
    25441 atccagctcc agctccagct ccagctccag ctccagctcc agctccagct ccagctccag
    25501 ctccagctcc agctccacag caataatata ttgcttatag taaaaaacca agttcctagg
    25561 aactggtttt tatctgcaat tatttctcta aaaacaaccg cttgtattag cctctactac
    25621 caatacggaa aatatttcgc attgtcgcaa tttttgccga cagccagcca ataaacacac
    25681 aaagcaccac taagaagaag gcttcgctga aatctaatcc gttcagttca aattgtacgg
    25741 taaacatatc agtcacatac ttcactacac cggtgaaata gctaatcgtt accgcactaa
    25801 acagcaccgc taacaggctg ccaaacaagc cgtaaatcat acctgtgtat aaaaacggac
    25861 gggcaataaa gtgatcagtt gcccctaaaa tttgttggac ttcaatcgct gctttgctat
    25921 tggcaacatc ggttcgcaca ctgtttccaa tcactaaaaa aactgccaac agcattaata
    25981 aggtacacac caccgcaata cgagcaatca gccaagttag agcagttaat ttttccagcc
    26041 agccgttatc taaacgaacc tcctgcaccc ctttaatttg ttgcaaaccg ttgcgtagct
    26101 ccaccatcgt atcagcatta ttaaaatttg ctttcggttt taaggtaacg accgcaggca
    26161 acgggttttc atctaaaata tctaacgctt caccaaagcc tgaccaagaa cgaaattcgt
    26221 ctaaactttg ttggcgagaa atatagttaa atgactcaat tttatccgtc tcaaaagcac
    26281 gaatgcgatc aacaacggta ttcacatcgt gttctgccaa atttttgtgc agataaacgg
    26341 ttaattgtgg ctcagggtaa aattgtgttg ctgcctcgtg ggtattcttc caaagtaaat
    26401 aactcacggt tggaatcgta agtgagaccg caatcaccag caccgtcaga aaagtgccga
    26461 gcttgcgttg cattaaatct tgccaaaccg ctcttaaaga gtagttggtt tgagcaccta
    26521 atttactaaa tgaacgaatc ataatatttc cttaaaattt aagatgccct tgctccagca
    26581 ctaaacacgg ctttggacgc tttgaaataa tattggtatc gtgggtggca atcagcaccg
    26641 ttgtgccggc ttgattaaat tcctcaaaca aacggaaaat ttcaaacgag agcttttcat
    26701 ctaagtttcc ggttggctca tcggctaata acagcgttgg gcgatgaaca atggccctgg
    26761 caatatcgac acgttgttgc tcaccgccgg aaaggtgcaa cggcagatag ttcgctttat
    26821 ctgccaagcc aacacgctca agggcaatgc gggcttcacg ctccacaatc gcttggttca
    26881 ttcccaaaat aatcaatggt aatgcgacat tatccaaaat ggttcggtcg gttaataagc
    26941 gataatcttg atgcaccatc ccgatttggc ggcgtaaaaa cggcaattca tgatgagcaa
    27001 gtcgggtaat atcgtgtccg ttaaacaaaa tttgcccgcc attggcacgc tcaatcccca
    27061 taattaattt taatagcgtg cttttccccg caccggaatg cccggtaata tatgccattc
    27121 caccggcagg taggtggaaa tcaatgccct gtaaggctgg ctttccgccc ttataaacct
    27181 tgttcacatt agtgaattta atcattctgt tcgtcctcgt ggctaaataa ggcttcaata
    27241 aattcttctg cattaaacgg gcgtagatct tcaattttct cgcccacccc aataaagcgg
    27301 atcggaatat tgaattgatc ggcaattgca aaaatcacgc caccttttgc cgtaccgtct
    27361 aatttagtta aggtgatacc ggttaaaccc actgcctcat taaacaattt cgcttggctg
    27421 atcgcatttt gcccagtgcc ggcatcaagc gtaagcataa tttcgtgcgg tgcggtttca
    27481 tcatattttt tcatcacccg cacaattttc ttcaactcgt ccatcaggtt atttttgttt
    27541 tgcaaacgcc ctgcagtatc agcgattagc acgtcaatcc cttttgccgc agcggattgc
    27601 atcgcatcaa aaatcaccga ggcagaatcc gaaccggtgc tttgtgccac caccggaatg
    27661 ttatttcgct ctccccaaac ctgtagctgt tcaactgccg ccgctcggaa cgtgtctcct
    27721 gctgctaaca ttaccgattt gccttcttgt tggaatttac gggcaagttt gccaatggta
    27781 gtggttttcc ccacgccatt cacaccaacc attaaaatga catacggttt tttcgcttcc
    27841 aacactaacg gttgagccac cggttttagc acttcaccca gttccacttt caactgttga
    27901 tacaacaaat ctgcatcttt taattgttgc ttggtagcat gttgcgttaa attgttgatg
    27961 attttttgtg tggtcggcat acctaaatcc gccacaagca actgctcttc cagctcttca
    28021 aataactcat catcaatttt cttgccacgg aagaaattac ggaagcccga accaatattc
    28081 tgcttggttt taatcaagcc ttgaattaaa cgactgaaga aaccgccttg actcggtttt
    28141 tcttgatatt catcttggat agtagattct tcaactgtgt cttgaacatt atttactaat
    28201 tcagtttcag caacttcttc agccacagcc tcttcgactt gataagtaac ttgctcttgt
    28261 tcgttgagat ctaactgctc agttgcaata ttttgaagat tttcgaccgc ttgttcgcct
    28321 ttttgttctt caaatgtttg ttcgatttta tcttcaacat catcaaagaa cgctttcgcc
    28381 tcttcaactt tttcttcaac aaactctttg aaatcttcga ctttttgttc aatggtatct
    28441 tctacttgct cagcaaattg ctcaattttt tcttcttttt cctcaaaata gtcttctaac
    28501 tgatctacct tttcttcaat tttatcttcc agctcatcta atttttcaga aaacgacttc
    28561 tcagtttccg gttcaacaat aacaggctgt tccggttgaa tactctcttg ttcttgttga
    28621 atctctttct gttcagcttc ttctttctta ccaaatccaa gccaagacca aaaccctttt
    28681 ttcttctctg acatattttt ctctcatttc tcgtaaaaat agactaaact tacatagtct
    28741 atcaaaaaat cccttatttt cctttagtga gtatgaaaaa aaatcgaaat tccccccaat
    28801 ctgttcagca aatgggcgaa gtacgggtta tcgccggact gtggcgaggc agaaaattac
    28861 ctgtactaaa tgccgagggg cttcgcccga caaccgatag agtaaaagaa acgctgttta
    28921 actggttaat gcacgacatt gctcactcac gctgtcttga ttgctttgca ggcagtggct
    28981 ctctgggcat tgaagccctt tcccgccaag cacaagcggt cgtttttttg gaaaaatttg
    29041 caaatgctgc caaccagtta aagaaaaatc tccaagcatt aaaatccgaa caaggtagcg
    29101 ttattcacac tgacaccctc gcctatttag cacaaaaaaa taacggtgag ccatttaaca
    29161 tcgtatttat cgatccgcct tttcatcaag ggtttgtacc tcaagtgcta aacttgctgg
    29221 cagaaaataa ctggctcgcc ccgaatgcga ttttgtatgt ggaaaccgag aaaaatcacc
    29281 cgccattaga gctaccgcaa ggctggcaaa ttttaaagga aaaagcagcc ggaatggtgg
    29341 taagccgtct gattcagcta taatcttttt gttttttata actaaaaaat ataaaataaa
    29401 acttatctat ctaacatttt attaacactc aaattagaat aacgaaatga aaaaattaac
    29461 ccctgatgaa gccattgata ttgcctacga tattttctta gaaatggcag gcgaaaattt
    29521 agatcctgcc gatattttac tgttcaacct ccaatttgaa gagcgtggtg cagtggaaat
    29581 ggtcgaaact tctgaagact gggatcaaga aatcgggact ttaattgacc ctgatgcctt
    29641 tgccgaagtt tgggttggct tagtcaatga acaagatgaa atggacgatg tattcgcccg
    29701 tttcttaatt tcccacgatg aagaaaaccg tgaatatcac gttgtttgga aagaaaaata
    29761 aaaaggagaa aaaatggcta atatcgacac taatcaacca atagaagcct cgcttaaatt
    29821 tcgtgaagca atggctcact tatcttctgc ggtgagcatt gtgacaacca atggcgtagc
    29881 cggcaaagca gggctgacgg tttcgtctgt ttgttccgtt accgattccc caccaacgct
    29941 cttattttgc attaataaaa acagccacgt tcacgatatt atccaacaaa acggcaaagt
    30001 atgcgttaat gtgttaagcc acgaacaaga agacttagca aaacattttg ccgccatttt
    30061 agaaagtaca atggaagaac gctttggttg ggatatttgg aacaacggct ttgacgatca
    30121 gcctgtgtta cgcagtgcta tttctgcttt acaaggcaat attgttgata cgcacgcagt
    30181 gggtacgcat actatttttg tggtagaagt gagccatatt gacgtagagc cgaaccacag
    30241 tttagtttat tttgcccgcc aatttagaag cgtgaacatt gactaaaata tatttaacag
    30301 aaatttgatc aaatccgact tttttagtcg gattttttat ttcctgtttt taaaacagtg
    30361 ctaaaatttt gccgtttatg tttgactgac aaaaggaaac aaaatggaaa atttaatttg
    30421 ctacaaacaa atgccggtgt ggacaaaagc aaccttacca caaatgttcc aagaaaagca
    30481 caacaccaaa gtcggaactt gggcaaaact caccattctc aaaggttctc tcaaatatta
    30541 tgaattaacc gaagagggag aaattatcaa ggaagatatt tttgatgcaa accaccaacg
    30601 cccaatggtt gagcctcaac tttggcataa ggttgaagct ctttctgacg atttagaatg
    30661 ccagttggct ttctattgca agccggaaga ttattttgct aaaaaatata atctgaccgc
    30721 tacccattca gaagtgctaa atgccgtcaa ttataccaaa ggtggcaaag cgttagattt
    30781 aggttgcggg cgaggacgca atgcacttta tctgaattta ctgggttttg atgtcactgc
    30841 tgttgatcat aatcaagaaa gcattgattt tctcaactat atgatcgaaa aagaacaagc
    30901 tcaaaacatt actaccgctg tttatgatat taacgaggca actatcggct cgcaaaacgg
    30961 tgaatatgac ctgattattt ccactgttgt aatgatgttc ttaaaccgtg aacgcattcc
    31021 tgccattatt gagaatatgc agaaaaacac taaagtcggc ggttataact taatcgtatg
    31081 tgcaatgagt accgatgact acccttgccc gatgccgttc tcctttacct tcaaagaagg
    31141 cgagctcgcc gattattatc aaggttggga attagtcaaa tataacgaag atttaggaca
    31201 tttacacaaa actgatgaaa acggcaaccg cattcaacta cgttttgcga caatgttggc
    31261 gaaaaaaatc agctaaactt aaccgcttgc agggggaatt agcttccccc taattcatca
    31321 aatccattct atttattttc actttttcat tccgcaaacg tttgcttgtg ctataatggc
    31381 ttcgtttttt agtcatttac tgttgaggtt aaagtgagca acacacaact aagttacaaa
    31441 gatgccggcg ttgatattca cgcaggaaac gagttagtcg aacgaatcaa gcctgatgtt
    31501 aaacgcaccc gtcgccctga agtaatgggc ggattaggtg gttttggtgc tttatgtgct
    31561 ttaccgacaa aatataaaga gccgatttta gtttccggta ccgatggcgt cggcacaaaa
    31621 ttacgcttag ccattgactt aaacaaacac gatactatcg ggcaagattt ggtagcgatg
    31681 tgtgtgaatg accttgtcgt gcaaggtgct gaaccgcttt tcttcttaga ttattacgcc
    31741 accggtaaat tagaggttga tgtagccacc aatgtcgtca aaggcattgc agacggttgc
    31801 gtgatttcag gttgtgcttt agtgggaggt gaaacggctg aaatgccggg aatgtaccac
    31861 gaaggcgatt acgatttagc cggattctgt gtcggtgtgg tagaaaaatc taaaatcatt
    31921 gacggttcaa cggtgaaaac cggtgatgcc ttaattgcat tagcgtccag tggcccgcat
    31981 tccaacggct attcgttaat tcgtaaagta ttggaagtca gccgatccaa tcctgcaacc
    32041 gatttattgg aagacaaacc cttaagcgaa cacttattag ccccaactaa aatttatgta
    32101 aaatcaatcc taaaattagt tgaagaagtt gatgttcacg ctatcgctca cttaaccggt
    32161 ggcggtttct gggaaaatat tccacgcgta ttgccggaat ctgccaaagc ggtgattgat
    32221 gaatcgagct ggcaatggcc ggcgatattt agctggttac aggaaaaagg caatatcagc
    32281 cgttatgaaa tgtaccgtac tttcaactgc ggtgtcggaa tggtgatagc cttacctgag
    32341 agagatgtcg aaaaagccct tactcttctt aaagagagtg gtgaaaatgc gtggcttatc
    32401 ggtaaaattg aagacttagg caccggtagc gagcaagttg aaatccgcta atttgcaaaa
    32461 taaatgctaa aattgaccgc ttgtagtaac tgatctgcaa acggttaaat ttttattgag
    32521 gaatgcaaat gcaactattt tggcctatct actttgtctt aatgaaccta gctgccttat
    32581 atttaatgta tagtgacaaa caaaaagcga tcaaaaaaga atggcgagtg ccagaaatta
    32641 ctctcctctc tttttgcctc ttaggtgggg ctatcggtgt ttacctaggt atgaaatact
    32701 ttcgccataa aacccaacat tggtatttcc acgtcgctgt tgtgctttct acttttgctt
    32761 ggctgattgg cttgccttac ttttatttag ctttatcatc atattaattt atcattactt
    32821 tttttaatcc gaaagcccaa tttatatcct agtccgctca caaaaaattt gatttagatc
    32881 gcattatttg tctattaaaa tcgttattat ctaccaaaat cgattgtcat ttattttaag
    32941 gagatgaata tgtcagatgt gcgtattgaa cacgatttac ttggtgaaag agaagtacct
    33001 aatagtgctt attggggcat tcatacatta agagcgattg agaattttaa tatctcaaat
    33061 gtcaccattt ctgatgtacc tgaatttgtg cgtggcatgg taatggtaaa aaaagctact
    33121 gcgttggcaa atggtgaatt gggtgcaatc ccgaaaaaaa ttgccaaagc tattgtggca
    33181 gcctgtgatg aagtattagt gaaaggacgc tgtctcgatc aattcccttc agatgtttat
    33241 caaggtggag ccggcacatc ggtgaatatg aataccaatg aagtgattgc caaccttgca
    33301 ttagaaattt tgggcgaggc aaaaggtaaa tatgatattg tcaatccaat ggatcacgtt
    33361 aatgcaagcc aatccaccaa tgatgcctat ccaaccggtt tccgcatcgc ggtttataac
    33421 agtatcacta aattaatcaa taaaatcact tacctacaaa ctgcatttga aaataaagcc
    33481 actgagtttt ccgatgtact aaaaatggga agaacgcagt tacaagatgc cgtgccaatg
    33541 acgctcggtc aggaatttaa agcttttgcc gtattattag atgaagaggt tcgtaacctt
    33601 aaacggacgg cagaattgct tcttgaagtg aatttaggcg caaccgctat cggtactggt
    33661 ctgaatacgc cagagggtta ctctactctt gcagttaaat atttagccga agtcacgcaa
    33721 ctgccttgct cactgtctga aaatctcatt gaggcaacat ctgactgtgg tgcttatgta
    33781 atggttcacg gtgcattaaa acgcaccgcc gtcaaacttt ctaaagtgtg taatgactta
    33841 cgattacttt catcaggccc acgtgccggc ttaaatgaaa ttaatcttcc ggaattacaa
    33901 gccggctcat ctattatgcc ggcaaaagta aaccctgttg tacctgaagt cgtaaaccaa
    33961 gtgtgcttta aagtgattgg taacgacacc accgttactt ttgcagcaga ggccggtcaa
    34021 ttacagctta acgtaatgga gccggttatc gggcaagcaa tgtttgaatc tatcgagctg
    34081 ctttccaatg catgtattaa tctacgtgat aaatgtattg acggtattac cgctaaccgt
    34141 gacatctgcc aaaactatgt gttcagctct attggtattg tgacctacct caatccattt
    34201 atcggccacc ataatggtga tattgtcggc aaaatttgtg caaccaccgg caaaagtgta
    34261 cgagaagttg tgcttgagcg aggcttactc accgaagaac aactcgatga tattctctcg
    34321 attgagaact taatgaatcc gacttataaa gccaaacgct ttaccgaaga ggaataatca
    34381 ttgtttacaa gcggtctgat tctggcaaaa aattgcaaat ttttaccaaa atcagaccgc
    34441 ttgttatccc attatttctt atttgctttc agcatcgcca ttaaatttgc aatatttgca
    34501 gaagattttg cctctttttc ctgttcggtc attcttggct tttcactttc ccactccaaa
    34561 tcatcttgtg gcaattccag taaaaaccgg ctcggctcag gtttgatgat ttcgccatat
    34621 tggcgacgtt ctttacacag tgaaaacgtg agcgtttgtt gggctcgggt aatgccgaca
    34681 taagccaaac gccgctcttc ttctacattg tcctcatcaa ggctggtttg gtgtggcaga
    34741 atcccctctt ccataccgat taagaaaacg tgcggaaatt ccaacccttt cgaggcgtga
    34801 agagtcatta gttgaacttg atcggcttca tcgtcctctt cgccacgttc gagcatatct
    34861 cgcaaggtta aacggtttac cacttgcacc aaattcatcg gaggctctat ttcatcgccc
    34921 tctaacatcg cttgcaccca ttcaaacaag gtctgcacat tacggctttg catttccgct
    34981 acttttgggt tcgccgccat ttcatacaaa taggcttcat actgaatttt cgccaacaga
    35041 tcttttactg cttcaatcgg atcggatcta tcggcttgat cggcaatttc cacaatccag
    35101 cgggcaaaat cctgtaaggc ttggtaaggc tttggcgtga ggcgttgtat gagttcaaaa
    35161 tcaaaaatcg cctcaaacaa actgacctgc ttttcattag caagtatgcc taatttttct
    35221 agcgttgccg ccccaatttc ccgtttcggc gtattcacaa tacgcaagaa agctgcatca
    35281 tcgtcttgat tcactaccaa ccgcagatac gccatcatat ctttgatttc cgctcgagca
    35341 aaaaatgacg taccacccga aattttatac ggaatgcggt tttgcattag caatttttcc
    35401 aacaagcggg attgatggtt gcctcgatac aaaattgcat aatctttgta tttggtcttt
    35461 ttcgagaaac gatgggcaat cagctcgccc acaatgcgtt ccgcttcgtg ttcctcattt
    35521 tttgcctcaa tgacctgtaa tttttcccct tgccccagtt ctgaaaacag ccgcttgcta
    35581 aacaagtgat cgttattatc aatcagaata ttggcacaat gcagaatccg ctggctggaa
    35641 cggtaatttt gctcaagttt aatcacttgc aaatcaaaat cttcccgtaa ccgttgcata
    35701 ttttcaggct tcgccccacg ccaagagtaa attgattggt catcatcgcc cacgaccgta
    35761 aagtttggct cgttgccgac aatcagctta attaactcat attggctggt gttggtgtct
    35821 tgatattcat caactaacaa atagcgaatt ttctgttgcc aacgagattt tgcttcggga
    35881 aattggcgga acagcaacac cggcaacata atcaaatcat caaaatccaa cgcattataa
    35941 gccttaagtt gattctggta gagctgataa aaatgtgaaa acactcgctc acgttcatca
    36001 cgcacacgag taagtaccct ttcaggcgaa agcaaatcgt ttttccagtt agaaatagtg
    36061 gcaattaagg ctttcagcag atccttatct tccgtcacat tttcaggcaa taaatgtttc
    36121 agcaaagcaa tttgatcctg ctcatcaaac aaggtcatac ccgatttaaa accgagcaat
    36181 ttatattcgc gttttaaaat ttcaaaccca agtgtgtgaa aagtcgaaat ggttaaacct
    36241 ttgctgtttt ctttgccgat agaatgatcc acccgttcac gcatttcccg agcagctttg
    36301 ttggtaaagg ttactgctgc aatctgctta ggcgaatagc cacaatgtgc aattaaatgt
    36361 gcgattttat taataatcac ccgagtctta cccgagccgg caccagccag cacaaggcaa
    36421 gcccctttgg tatattctac tgcttgttgt tgttgagaat tgagtttcat tgaatctatt
    36481 caaaagtaat tttgacaact attttaacgg aaagaaaaca agcggtcgaa ttttcaggaa
    36541 aatttgcaaa aaactttgaa aatccgaccg cttgttcatc agagaaaaat ccccaaaacg
    36601 caaatttttc ctttcaatct tgccccttta gctatatcat tataagttga ttttttaggg
    36661 gcaaatgcct gattttataa ctccttttct ttttaattta agggaaaaaa acagtagatg
    36721 gaaaaagtag aacagaaagc tatcattgag cttaaaaatg taacaaaaag ctacggtagt
    36781 aaaacgattc ttaaaaattt aaatttaacc attaacgatg gtgaattttt aacaatttta
    36841 ggcccttccg gttgtggtaa aacaactgcg ttacgtttaa ttgccggttt tgaagattta
    36901 actgaaggtt caattattct tgatgggcaa gatgtttcta acgttccggc ggagcaacgc
    36961 ccggtaaaca ccgtattcca aagctatgcc cttttcccac atatgacgat ttttgaaaac
    37021 gtggctttcg ggctgcgtat gcaaaaagtg ccaaatgctg aaattgagcc acgtgtgatg
    37081 gaagcattac gaatggtgcg tttagaagac cgcgctcaac aaaaaccggc tcagctttcc
    37141 ggtggtcagc aacaacgtat tgcaattgcc cgtgcggtgg taaataaacc gaaagtattg
    37201 ttgttagacg aatcgctttc tgcgttagat tataaattgc gtaaagagat gcaaaatgaa
    37261 ttaaaagcat tgcaacgtca attaggcatt acctttattt ttgtgaccca cgatcaggaa
    37321 gaagccttaa ccatgtctga tcgtattatc gtaatgaacg ctggtaaaat cgctcaagac
    37381 ggtacaccac gtgagattta cgaagagcca agtaacttat ttgtagctcg tttcatcggc
    37441 gaaattaacg tttttgatgc aactgtaatt gagcgtgttg atgcaactaa tgtaaaagca
    37501 aacgtagaag gtcgcatttg caatatcaaa gtggaagatt tagaggttca gccgaaccaa
    37561 aaattaaaag tattgttacg ccctgaagat attgtgattg aggagttaga cgaaaacgaa
    37621 agctcgaaag caattatcgg tcatattatc gaccgtaact acaaaggtat gacattagag
    37681 tctagcgtga gattagatca taacggtatg aatgtattgg ttagcgagtt cttcaatgaa
    37741 gacgatccga acattgacca cgaagtggga caaaaagttg ctcttacttg gtatgaaggc
    37801 tgggaggttg tgttaaacga tgaaggcgaa taacaaattc caaaatggtg cggtcgcaac
    37861 tattttcggt tggttattac ttttcgtatt agtgccgaac gtactcgttt taatcatcag
    37921 cttcttaaca gaaaaccgtc aaagtcagta ttttgtggac tttgcattta gttttgatgc
    37981 ttataaatca ctgtttaatg acacctatgc agcagtattg tggaactcgc tatatatggc
    38041 gggcattgcc acctttttct gtttgatcat cggctatccc tttgcatttt ttattgccaa
    38101 aatgccggaa agaattcgtc cgtttttact gtttttagta gttctaccgt tttggactaa
    38161 ctcactgatt cgtatttatg gcattaagat tttcttaggc gtaaaaggct ttttaaatga
    38221 aagcttgatg gctttaggta taatcagcga gccaatgcgt ttattaaact cagaaattgc
    38281 gattattatt ggtttagttt acattctatt accttttatg attctaccgc tttattcatc
    38341 aatcgagaaa attgataacc gcttactaga agctgcaaaa gacttaggtg caaacgcctt
    38401 ccagcgtttt attaaagtga ctattccatt aacaatgccg ggcattgtcg caggttgttt
    38461 attagtatta cttccggcaa tgggtatgtt ctatgtggca gatttattag gcggcggtaa
    38521 aacaccgtta gtaggtaaca ttattaagag cttgttctta aataccaacc aatttgcatt
    38581 aggttcagca gtaagtattg cattaactat cttaatggca ttaatgcttt atgtttacta
    38641 tcgtgcaaac aaattattaa ataaaaaggt ggagcttgaa taatgaaaaa gatgtttaga
    38701 aaccttttta tgttggttgt ttttgcatat ctctatattc caattatcat tttagtgatc
    38761 aactccttta atgaagaccg ctttggatta aattggaaag gctttacttg gaattggtat
    38821 gagcgtttat tcagtaatga tacgcttgta caagcaacat tgaactcatt aactattgcg
    38881 ttctttgcgg caacattctc aaccatttta ggggcattaa cctctattgc gctttaccgt
    38941 taccgtttcc gtggtaaaaa gctagtgggc ggaatgttat tcgtggtaat gatgtcgcct
    39001 gatatcgtaa tggcggtatc tatgctcgta ttatttatga tcttaggtat caagctaggc
    39061 tttatttcgc tattaattgc acacattact ttctgtttgc cttatgtggt aattgcaatt
    39121 tcctcacgcc tcagcgattt tgacggcaaa atgctagaag ctgcaaaaga cctaggtgca
    39181 agtgaagtga ctattttgcg taaaattatt ttaccactgg cattaccttc gattatttca
    39241 ggctggttgt taagctttac gatttcgtta gatgacgtta ttgtttcatc tttcgtgaca
    39301 agcccaagct acgaagtttt accactgaaa attttctcat tggttaaaac aggtgtaaca
    39361 cctgaagtga atgcactagc aactattatg attattttct cattaacatt agtggtatta
    39421 agccagttag tagtgaagaa aaaagtctaa aaatcactaa aaatcgtata cataaatcag
    39481 cactttaaag agtattaaag tgccgatttt tttacaaaaa taagctaaaa aaacaaccgc
    39541 ttaagaataa tgaattctta taaaaatagc cataactaat caatatcttt acaaagccgt
    39601 taatttacgc tattaattgc ctaccaatat aactaaaaag agtggtgctt atgctgaagt
    39661 ttatttttaa acgtcttctt gaggcgattc caaccctact aattctgatt accttttcct
    39721 ttttcctgat gcggcttgcc ccgggtagcc catttaccag tgagaaagcc tatccgccga
    39781 aagtaatggc aaatatcgag gcaaaatatc acctgaatga accgctgtat aagcagtatt
    39841 ttctttatat ggaaaatctg tcaaaaggcg atttcggtcc atcttttaaa tataaagatc
    39901 aatcggtaaa taatctgatt gcttctgcgt ttcctgtttc gataaaactg ggcattactg
    39961 cctttatttt tgcggtgctt atcggtttaa ccgcaggaac tatcgctgca cttaagcaaa
    40021 atagtaaatg ggattattta gtgatgggct tttcaatgac gggtattatt atgccgagct
    40081 ttgtctttgc tccgctgttg gtactcatgt ttgcgattta tctcaaatgg ttgcctgccg
    40141 gtggttggaa cggtggtcag ctctactata tggttttacc tgttctctct ttaaccatta
    40201 gctatgttgc cggcattgcc cgtattactc gtggttcaat gattgaggtg ttgcactcta
    40261 attttattcg caccgctaag gcaaaaggct tgccaatgcg taaaattatt ttcaaacacg
    40321 ctttgcgtcc ggcattgttg cctgtgatca cttatttagg cccggctttt gttggcatta
    40381 ttaccggctc gatggtaatt gaaagcgtgt ttggcttacc gggaatcggg cagttgttcg
    40441 taaacggagc attaaatcgt gactattcat tagtattaag cctaaccatt ttggtaggta
    40501 cgctcaccat tttatttaat gcgattgttg atattttata tgcggtcatc gacccgaaaa
    40561 ttcgttattc ataggagtaa agcggaaaat gcaaaattct tcaaaaaatc aaccgcttgt
    40621 tgaggttacc tcaaccattc aaggacgaag tttatggcaa gatgcacgcc gccgtttttt
    40681 ccgaaataag gcggctgtgg caagtttgat tattctttgt tgtattattc tttttattac
    40741 ctttgcccca atgctaatgc cgtttagcta tgaagatacc gattggaata tgatggggat
    40801 tgctccggat tttgaatctc aacactattt cggtactgat tcttcagggc gtgatttgct
    40861 ggttcgagtt gcaatcggtg gacgcatttc gttaatggta gggattgccg gtgcattaat
    40921 tgcggtgctt atcggtacaa tctatggagc aatttccggt tatttcggcg gtaaagtcga
    40981 tatggtgatg atgcgttttc tggaaatttt aagctcattc ccatttatgt tcttcgtaat
    41041 tttgctggtt acgttcttcg ggcagaatat tttcctgatt ttcattgcaa tcggtatggt
    41101 agcgtggctg aaccttgccc gtattgtacg tggtcaaact ctttcgctta aaaataaaga
    41161 gtttgtggaa gcagcgattg tgtgtggcgt ttcccgccgt caaattattt ggcgacacat
    41221 tgtgcctaac gttttaggct tagtggtggt ttatgcctcc cttgaagtac catctctgat
    41281 tttgtttgaa tcgttcttaa gtttcttagg gcttggtaca caagagccga tgagcagttg
    41341 gggggcatta ttaagcgacg gagcggcaca aatggaaacc tcgccttggc tactggcttt
    41401 ccctgccttt ttcttatgtt taacactgtt ttgttttaat tttattggtg atggcttgcg
    41461 tgatgccctc gatccaaaag ataaatagag gtttagaatg gaattattag cagtaaataa
    41521 tctcgatgtt tatttaaaaa cggacgaaga attagttcac gcagtgcgta atgtctcgtt
    41581 ctcgattgaa aaagggcaaa cccttgcgat tgtgggggaa tcgggttcgg gtaaatccgt
    41641 tacttcaatg gcaattatgc agttattgcc taaaaatatc gtctcattcg gtgaacgctc
    41701 aagcatcatt tttgaagaac aaaacttgct tactctatct gaaaaagcaa tgcaaacagt
    41761 tcgaggtgat cgcatcggta tgattttcca agagccaatg acctcactca atccttatat
    41821 gccgattggc aagcaggttg ctgagacggt tcaaacccat aatccgcaaa tcagcaatgc
    41881 cgaagcggaa aaaatggtgt tggaaacttt gcaaaaagta aaaattcccg atgcggaaaa
    41941 gaaaatgatt tgctatccgc acgagttttc cggcggtcag ctacaacgaa ttatgattgc
    42001 aatggcaatt atcaacaaac ccgatttatt gattgccgat gagccgacca ccgccctgga
    42061 tgtcacaacc caagcggaaa ttttggattt aatgcacgac ttacagcgtg atatgggaat
    42121 ggcgattatc ttaatttccc acgatttacg cttggtgcat aaatacagtg acttagtctg
    42181 cgtaatgcaa aacggcgaaa ttattgagcg aggcgaaacg gaaactgtgt tcaccaatcc
    42241 gcaacatcct tatacggtgg agctacttac cccgattcca actaatttaa aaggggaatt
    42301 accgccaaat gcaccaacct tgcttcaggg tgagcatatt aaggtagatt atattttaaa
    42361 acgctcgcta ttcggtaagc cgaaaaaggt gtttaatgcg ttaaaagata tttcattgca
    42421 cttgaaaacc ggcgaaacgc tcggcattgt aggcgaatcc ggctccggga aatctaccct
    42481 tgggcgtgcc attatgcaga ttttagatta tcgcggcaat attacatttg caggtaagac
    42541 actggctaat ctgaataaag ccgaacgtca agccctgaaa aaagatatgc aaatggtgtt
    42601 ccaagacccg ttcaactcac tttctcctcg cttaacagtt ggggaaatta ttgctgaggg
    42661 cttaaccgta cattgccctc aaatgagcaa aaccgaacgg cgggaaaaag taatgaaaat
    42721 gttggaagag gttaatctca accctgcaat gattaaccgc tatccgcacg aattttcggg
    42781 cggacaacgc cagcggattg cgattgcaag ggcaatcatt ttagagccga aatttgtatt
    42841 gcttgatgag ccaacctcag cacttgaccg ctctactcag atcactgtaa ttgaattgct
    42901 taaccgctta cagaaaaaat acggcttaag ttatattttc atcagccacg atttggcggt
    42961 catcaaggca cttagcgacc gagtgattgt aatgagccaa ggtgagattg tagaaagcgg
    43021 tgatgtcact caaatttttg aaaatccaca acaagaatac accaagcggt tgattttagc
    43081 ctctaatttg taaccccttc cacaaggtct tattctacca aaaaacaaga ccttgtcatt
    43141 ttatgctagc aaaacattgt aattttgata ttttatttca attttttgaa aaaatatgga
    43201 actttatata aaactcactt tctaaacaat acgttatctg aactaagata acgcttattt
    43261 aaaggaaaat atatgaaaaa attgatgata ttcgcaacaa ctgccatgat tgtaagcaat
    43321 ttagcccatg cagcaggtga acaaagtgat gcaagagaag cccacgaaag caccgtaaaa
    43381 acctcaactg ttaagtatag ctgccaaaac ggcaaaaaat taagcgtgaa atacggcttc
    43441 aataaacaag gcattccaac ctatgctgag gcaaaattaa gcggtaaaaa acgttttatg
    43501 ccgatcaacc tatacacgac agatgcaacc ggcactaact ttggtgacga aaacaatttc
    43561 agcctttacg gtgatccaat ggaatttacc aaccaccgta aagcatcagt aaatatccaa
    43621 agccccgcaa gtgaaatttt atataaaggt tgcacacctc aaaaatagat aaaaagtaaa
    43681 atgagtccgc tctgataagt ggctttttaa tagctgttta ttgcagatag gaaagcattt
    43741 tgtttttatc tactatccag aaacaagcgg ttaaatttgt ttaatttttt acaaaaaatg
    43801 ggccaaaatt aaccgcttgt ttattactat aaagaaataa gtacgtaaaa attaactctt
    43861 acatttaatg cttatctcta aaatttaaac tccactgatg ccattacata gcgctctgga
    43921 gcaaggtaac gatttaagcc ttcgccagtt atactgttgg caactccagg actagttata
    43981 ccaatagttc ttaaactatc ccaagtccaa tattttttat taaagagatt ataaacccca
    44041 actttaacaa tcgctctttc tccaaacttt ttgtgtgcaa ctaagtcaaa tacggtggct
    44101 gaattactta agtatgggta agtggttaat gatttatcgt aacttaaata cccagtattg
    44161 gctaaaatag catactgttg tgcatatttt gcttttttgc cttgtgtgta tgtgccgttt
    44221 aggtgtatcg cccagtcatt gttcacagct cgataaccta tgccgaacaa tgcttttaac
    44281 ggttgaaccg tgagtaagtc ggtaccatca ttacgtttgc cacgagcata accaaatcca
    44341 ccattaagct caaagccttg tggaattgca ttccacgctg tgtttaagtc taaagttccg
    44401 ttaatatcaa cacctttgat tttagctcgg ttaacatttt gcgattggta aatattgtta
    44461 ccaatagtgg caagatcaat cagatttcta tagtgggtat ggtaagcggc tacgctcaag
    44521 ctacctaatg aaccattacc taccagtgaa atttcattac ctaagcttgt ttccggtttt
    44581 aagttagtat ttgctaagaa agtttggctt gctccacgcc cttgaacttc acggttaaag
    44641 aacatttcac ttgcggtagg tgttctaaaa ccacggctga gtttatagcc aatttgccat
    44701 acaggagaga gctgataatt taaaccaata tctcccgccc aattgttaaa ggttttatct
    44761 gacaaactat tatcatcaga atgtaatttc gactgctcat atcgagcatt taaatgagca
    44821 gatagatttt gtgtcagtaa aatagagtct cccatcaaaa tatggaaaga cttggttttt
    44881 gccggagact gcatattttg atcggttggc gtaatacctg ctgtataggt ttgcatatca
    44941 aaactgaaat cagatacacc atagcctaat tccgttgaca atttatgttc ggtattacct
    45001 agatcaacag gcttgaatgt aacacctaag ctaccttcaa catttttagt attaaaagcc
    45061 cgtttggtat tatctgtttt tgtaccacgg gcaatagtga tttgatcgtt aatacctgaa
    45121 atttcagtat cctgtttggt taccgcaact ttaatatttt caagaatact gttttttgga
    45181 gtgtataaat aagtaacgcc ataagtttca atttcctgca catccaaaaa atcacgtaat
    45241 gtgacggtag aataagaaag ctcttgaccg gcgtttttac tgcgttgctt agaagttttt
    45301 aattcaaggc gattttcatc attccatttt agccctaatt ttgccaagta gctgtattga
    45361 ttatttttgt aaggatttgg taaaccacga ccacttccca taatatccgg acctttagac
    45421 gttgtttgtg tttcgtgtcc ttgacggtgg ctatacataa ccaaagcatc cgcatattga
    45481 ccatccgcag caatacctgc cgtctcaata ttctctttat tttgaccgtt ataggtatat
    45541 ttcaacatcc caccaaattg gcgacctttc attaaaatat cacttacggt tttagtttta
    45601 tagttcacag agccgcctaa tgccccattg cctacttttg tgcttgagcc tttttcaatg
    45661 gttacatcgc tcattaattc agtatcgatt tcagggcgag atttattgta gtaactatag
    45721 cgactaaagg tggcatagtt atttgatgct gcttgcgata tgccatcaac tgttactgcc
    45781 acttgattac cttcaacacc acggatatta aacccttgtg ggccaaagcg gcctgtttgc
    45841 ggaacgccca tatcagtact ataacgtact aaatcttcat tgctcatcac cgcttgctgt
    45901 ttaagtaggt tctcctgctg ctcatttact tcaatagtat ctagttcaat gctactaatc
    45961 tttgtttctt gagctaagga gagttgagaa ataaagggag taatcgctat tgctaataca
    46021 gtttgcttta tttgcatatt ttagatcctc tagttagttt aatccgttta atgttaacac
    46081 tatatcattt taattgaaaa ttgaaataat aattattatt atttaagttt agataaaaat
    46141 caaatggagt ataaaatgag aaccttactt ttttctttca ttgccctatc aatgtgttta
    46201 aataccacaa aggcggcaga aaaaattgtt tcaactgcgg gctatgcttc cgaaattgtc
    46261 gcagcactag gaaaagctga taagttagtc ggtgtggata ccacttcagt taaacctcaa
    46321 acgataatgg agaaaaaacc taaaatcggt tatcgtcgcc agctttctgc tgaaggtatt
    46381 ctctctttaa ccccagattt gattatttta gcccctgatg ccggccctaa cgcagttatt
    46441 gagcaaatta aagccagcgg tattccatta cttcacttag gagagaaacc gagcttagca
    46501 gggattcgtg aggatattca gcaaattgcc aaggcgattg gtgcagaatc agaggcaaaa
    46561 caattaacag aaaccattct ggcagatgaa aaaaaattag ccgacattcg tagccaacat
    46621 tctactgaca aagaagtctt agtgctgatt gacactgcat cgcaaggtat ctttgggcta
    46681 gggaaaaaga gtgtgggtga tcatttctta accttgttaa atctaaacaa tagtttcaat
    46741 gctgagggca ataagccact cgccaatgag gctttagctg caagcaatgc cgatgttatt
    46801 ttattagcct cccgtaatca ggcaaaagaa tctgcaacga tcagtaaatt agcagaatcc
    46861 agcccacaat acgcccaact cacaaataca caagcgggca aaaaaggctg tgtttttgca
    46921 atcaatattt tagatgcctt gggctttggg ccttacactg ctcaatatgc acaccaaatt
    46981 ctcaccacta ttcaaccttg tttaaaataa cggatacgct ttgaaactgc atttaacctt
    47041 aattttcact ttaattatca gcttagtgat ttgtacccat ttaggggcga tgtcattacc
    47101 cctatccgct tggcactgca acaacgctga atgcgaaagt gcagcctata ttttatggca
    47161 aatccgcctg cctcgattac taggggcatt attcatcggg gcagccctcg ctattagcgg
    47221 agcaacaatg caagggctgt ttcgcaatcc gttagtagat ccggggatta ttggtgtctc
    47281 ttcaggtgct gcattggctg cggcattata tattgtggtg attcagccac tactgccgga
    47341 atcaatcagc tattatgctc tacctattgc cgccttttta gggggctggc tggtgacttt
    47401 tatgctctat ttactttctc aacgtaacgg gcaactacat atcgccatta tgctattaat
    47461 tggtattgct ctagctgcat ttagtggcgc tttaaccggc atactgattt atgttgccga
    47521 tgataaccaa cttcgtagtt taaccttttg gagtatggga tctttagcag gtatgaattg
    47581 gcaaatggtg gcaatgatgg ctgcggttgt cttcatttgt agcccactta tttggcggga
    47641 acaccgtgcg ttaaacgcct taacattagg tgaagaagat gcacaataca ttggttttga
    47701 cattgcaaaa gtcaaacgtc gtcttgtgtt ttacgttgcc ttattaaccg gcacaagcgt
    47761 tgcctgtgtt ggggctatcg gctttgtcgg gctggttatt ccacatttaa tgcgtttact
    47821 gggaggcagt aaccaccgcc atttattact caatagtttg gtttgcggtg caatcttatt
    47881 aatgattgca gatactcttg ccagaaccct agccgccccg gcagaaatcc cgattggtat
    47941 ttttaccgcc ttatttggtg cgccattcct tgcagtaatg gtatggaaaa gtgggaaaca
    48001 tatctaatga gcaatttatt aacttgccaa aatttaagca tcgttcatca acaaaaaaag
    48061 ttgctggaga ttcaagaaat tgcctttgaa caaggaaaat ttaccgccat catcggtcca
    48121 aacggagccg gcaaaacaac cttgctcaaa gccttaagcg gtaataatgc acaaactaac
    48181 agtgccgtat tttatcaaca tcaacgctta acagacttaa acggatatgc tctggctcaa
    48241 aaacgggcaa tgctcagcca acagagccaa attgcctttc ccttaaaagt agaagaattg
    48301 gtacaactcg gaagagagcc atatcgccaa agtgaatttg caaaatttaa tgaaaaaata
    48361 accgcttggg ctatggaaac aatgtcttta accgcattaa aagaaagaag tagcatacaa
    48421 ctttccggtg gagaacaaca tcgagcgcat attgctcgag tgctggctca actcgttcct
    48481 gaaccgaatg ccgatttaag cggaagctgg cttttgcttg atgaacccac caaccatttg
    48541 gatattcatc accaatatca gcttttttcc ttactacaaa agctgaaaca acaaggctta
    48601 actatcattg cgattttgca cgatcctgca ttggcaataa atcaagccga tcatatctta
    48661 atgctaaaaa atggagaaaa atttgctgaa atgtccgcta aagccattgc agaaagttgt
    48721 ttattagatg agctgtatga aatgaaaatg ggctgtcgct attgccctca cagcgggcaa
    48781 tattatcttt gccctgcatt agctgaaagt tagggtgcga tgcaccctat cgtttaatct
    48841 tctgcatatc cacaagcagg cagtagttta ccgtctaaat acgctttgcc gtgctgagaa
    48901 actaatctac ccgaacagaa ccactcaatc accaacggat aatatcgatg ttcttgctca
    48961 accactcgag ccattacatc ttcaatctca tcttcaggat aaatcggcac tttagcttgt
    49021 aataccaccg caccagcatc cacttcttca ttcacgaaat gaatagtcgt gccgtgttca
    49081 ctttccccag cctctatcgc tctttgataa gtgtttagcc ctgggtattt aggtaataag
    49141 gaagggtgaa tattgagtat tttgccagca aaatgttgcg taaattcagg cgttaaaatt
    49201 ttcatatagc cggctaatac aattaactca gctcctaact gctcaatttg ttcggcaatc
    49261 gcaagatcca tttccacatt gctttggtaa tctttacgag aaaatacaaa tgtcgggatt
    49321 cccgcctgtt tagctcgaat cagcccatag gcatctgcct tattgcaaat tacaccgcaa
    49381 atttgaccgc ttgtatccgc agatttttgc gcatcaatca ttgcttgtag gttagaacca
    49441 ttccctgaaa ttaaaaccac aaattttttc atattacaca ccggctgaat attcatcgtt
    49501 ctggatatta tgccttgaat ctcaacatca gtacaggaaa gaaaaagggc gtattggtta
    49561 aaataagcca ctttcaagct agaaacgcac ctctgcccct agtgtgtaag ttcgacctct
    49621 ggcactattt gtgaaacgat aggtgtctgt atcatagtca tactcttctg cggtggaaga
    49681 gttatacgca tttaaggcat caagataatt tcggttcatc acattttgta ccccggcttt
    49741 taaggttaaa tgtttattca ctttgtaatt tgcatataaa tcgataatca ccggaatatt
    49801 cggtaactgc tcgtgaataa tgttgccatc ttcgtctaaa tcaataccga cacgtttcgc
    49861 tttgcctgta tatttaaaaa tgctagacag tgttaatttt ttatccagca atttagcccc
    49921 tagctccaaa gtcgcataat cttttggtag ctgggtataa gcttcagtgc caaatccata
    49981 aagaatagtc gcaccttttg aagtgggtgc tgtgctttca gttcgggtat aactaccatt
    50041 gacaaaaaaa gcatcggaat cgtaagccag ctcaacttcc caacctcgat ttttaacctt
    50101 ttcagggtga ttcacataaa tttggaactg tatagcattg gtagcatcac ttgaatttcg
    50161 acatactgtt ggcccacaac catacaacga gaggttatac aaatagtctt taatgcgtga
    50221 gttaaaatat accgctttta gccccaagat atcattattg agtaatacat tatcttgatg
    50281 aatattaaac ccaatctcat aggttttcgc actttctggt ttcaaaaacg ggttcacact
    50341 caagccattt cgactggtat taaacatttc ttgcacatta ggcgaacggg aggtttgttt
    50401 gtaactgaca aaaggttgaa accaatcagc aacctgaaat gctaaagtgg cagaaggatt
    50461 caacttataa tgttttttat taacatcaaa cccaaaagaa gggaaacaat aatccatatc
    50521 atcgctatcg cattctggct tatatccttt taactgatag cgtgaatagt gaagacttga
    50581 atttaaagtg acaatgccgt atttccattc ggtgtctagg taaagggaat caatattttg
    50641 cttacctgcc ggcccaaaag cggcattgct aatcgctcca tcattattct tactttccgg
    50701 taaatcacgg gaatatttat ttccctgact caaaacggct ggtgttattc aaatcaaaca
    50761 tccacatttt gtttttggtt gaggcatctt ctaatgtcca tagttttgca tcatcgtgga
    50821 aatcttgctt agtttctgtt actgctgtta ggaatttcag atcaatccaa tcagattgag
    50881 gctggtaact ggattctaag gaataggtca cactatcaat attacgcccc actaagctat
    50941 ttttatattg acgtccggac aatttaaact ctgaatcttg atttggctta aaggcaattt
    51001 ttcccatata agattcaggg tgatttttta acccttgcat ataagcagaa tccgttgcca
    51061 ttgtgccatt acctcggcga taattttgac tgatactact tttgctaaaa gccaataaac
    51121 tgccaagaga accactttcc agcacatcaa cttttccggc tagtgcaagc attccgtttt
    51181 ttcccagatc attattgcca taattaaaac ggcttaatac gccgacttta tgttgttcta
    51241 gtagaatatc ttcgacatca atcgttttaa aattagcact accggctaaa gcattcaatc
    51301 cggctgcacc attgttgtag cctttcgcaa tatcaactcg ggttaaaaaa ttttgatcaa
    51361 ttaaagtgct gaattggctc attggcccgt taccatcagt gtggaactta ccacctccgt
    51421 ttgctgatgt accaagctgt gtttgtggca cgccatcaac taaggtattt acccgaccaa
    51481 gaccactcat attacgaata ttcacactca cgcccccttg ccccgggtca atttgggtat
    51541 agccacctgc gacagaacgg acaatactat ctaaactttg cattgcattc acattcattg
    51601 ctcgagaact caccgagccg gctttactga aattctcaaa attagggttt tccacagtgc
    51661 cataaaccgt cacagtatca agctccgcaa tatttttcgc cttttcctct gccaatgcag
    51721 tttgcgatcc tcccatacac aaaaccggaa acaaaatgcg tgtgattata ttaaatttca
    51781 taattctcct tattgagtga cccaaagata atctgcctgt gaagaagtaa tttcttctct
    51841 ctctgtttta agcattagca ccgctacttt ttttgttcgg tcatattccg caatatgcaa
    51901 cggaacgcca agatctttgc gaacgtggtg gttacctgca atcagcaagc tagtcgataa
    51961 cgcatttttt actaattttt ctgccattct gcgatcacgg aattgttgta ctgccaccat
    52021 attttccatc gggtaaggca ttccgtgatt cattgacagc aacagttgtg cgatcttttg
    52081 cttaacttca gaggaagtgg atacagaacc ttttaatggc tccgccccat ttaataaaat
    52141 ttcaacctct ttatctgtta agttagtggc tataacacga ctatttgaac ctaagctctc
    52201 taccactaaa tcttgataca tcttccaatc ccatttttgc cattgaattg cctctcttaa
    52261 atccgtggct gataaattaa ccggtcggtt aaactgaatg cgatcaatcg caggctgctg
    52321 atccacattt aacatctcca acgcaattaa atgtaacttg gctttcttcg taagttgatt
    52381 aaataaatac aattcaattt ggtggtgaat taactgagta tgctcctcac caactaaaac
    52441 gtaatcttga gaagatagac gggaaagtag ttcagtaaat gaaatcgttt gattggtatt
    52501 cagatcaata atttggccga tagagtccac gttttgttca ttaagggatt gcgttgaaac
    52561 cgagcagcct aaaagaaaaa aagccataaa aaggctagct aaaaaagagg aaatacgagg
    52621 taacataaca aaaaataaat taatgagaat tattatcatt atgttatgta aaaaaagaaa
    52681 aatcaatcca ttttcagaaa acagataaag aaaatgattg ataaaacaaa aagcggtaat
    52741 atttctaaaa aatattaccg cttgaaaaag tgtaaagttg agattatgcg tacactggta
    52801 aacgtttaca aatgtctaaa actttcgctt tagtctctgc aatcacctgt tcgtgattat
    52861 ccttaccaat gctatctagc acatcgcaca tccagccggc taatgctgtc acctctgctt
    52921 ctttaaaacc acggcgggtc acagaaggcg tacccacacg aatacctgaa gtcacgaatg
    52981 gtttttgagg gtcgttcggc accgagtttt tattcacggt aatgttcgca gctcctaatg
    53041 cagcatctgc cgctttgccg gttaaacctt gttttacaaa gctaacaagg aataaatggt
    53101 tttccgtacc gtttgaaacc acatcaaaac cacgttgctt aaatacctca accattgctt
    53161 ttgcattttt tacaacttgt tgctgatatg ccttaaattc cggctctaaa gcttctttaa
    53221 aacaaaccgc ttttgccgca ataacgtgca tcaatggtcc accttgacca gcagggaata
    53281 cggcagattg cagtttctta tacatttctt catcgccaga tgcagataaa atcaaaccac
    53341 ctcgagggcc ggctaaggtt ttatgggttg ttgtcgtcac gacgtgagcg tgaggaagcg
    53401 gatttggata aactcccgcc gcaattaagc ctgcaacgtg agccatatcc acaaataaat
    53461 atgccccaac ttcatcggca atctcacgca tttttgccca atccataact tgagaataag
    53521 cagagaaacc agcaacaatc attttcggtt tcacttcttg ggcttgtttg cgtaatgctt
    53581 cataatcaat taagccttca tcagtaatgc cgtattgttc tgctttataa attttaccag
    53641 agaagctaac tgaagcaccg tgggttaaat gcccgccgtg cgctaaactc atacctaaaa
    53701 tagtgtcacc cggattaagc aacgccatat atacggctgc attcgcttgt gagcctgaat
    53761 gcggttgaac gttggcataa tctgccccga acaatgcttt cgcacggtca atcgcaagtt
    53821 gttctacaat atccacatac tcacaacccc catagtaacg tttacccgga taaccttctg
    53881 catatttatt ggttaattgt gagccttgag cctgcattac acgtgggctt gcatagtttt
    53941 cagatgcaat taattcaata tgttcttctt gacggcgatc ttcatcttga atggcttgcc
    54001 ataatactgc atcgtaatca gcgatattca tatcacgttt taacattttt ggactcctaa
    54061 taagcttaag taaacgtttg cgtaagttga tttcacgtta ttttacgcat tttttagttt
    54121 catagatagt attatttata taaaaattaa cttcgagtga aagaaaaaca agcggtcaca
    54181 ttttgtaaaa aatttaccaa atatgaccgc ttagtattat tcattgaatt aatgattatg
    54241 atcttttaaa tgctttgccc attggtatgc agcaaatgaa aatgcaagca aaagaaataa
    54301 tccgattgtc aatccgtcca tttacatctc ctctgctgtt tctcgaaaca atcttgccgt
    54361 tgctaacaaa aaataaacta ctgcaaataa ggtaattgag tgtgtaaatt tcattagcag
    54421 tgaatattct ccatagagaa taacaggaat tgctaaaatt gcaacttttg ccacatcgtc
    54481 cattagtttt gcccaagcct caaaggagct tttcttaatt ggctttttaa atagatttag
    54541 catagtgcct ccgtcatttc ctgttatttt ggaagaaaat ctggaaacga gcaaaaagca
    54601 aagttgatat tttcgatgca gatcgcaaaa ttattttgcg aattccgcac gcaatatcgc
    54661 tgccccttgg ctgagtgcct gtaatttacc ttgtgcgact tggcgtgaaa gtggtgccat
    54721 tccgcagttg gtgcttggat aaagtttatc cgcatcgaca aattgtaatg ctttgcgtaa
    54781 cgtatctgcc acttgttccg gtgtttcgat aatgttggta gccacatcaa tcgctcccag
    54841 cattactttt ttgccacgca ctaattcgat taagtccatt ggcacacggg agttttggca
    54901 ctctaacgag ataatgtcga tttttgattg ttgcagtttc gggaaactct cttcgtattg
    54961 acgccattcg ttgccgaggg tctgtttcca gtcggtattg gctttaatgc cgtagccgta
    55021 gcagatatgc accgccgttt cgcattttaa gccttccgcc gcacgctcta acgccgccac
    55081 gccccagtcg ttcagctcat cgaagaagac gttaaatgcc ggttcgtcaa attgaataat
    55141 atccacccct gccgcttcca actctttggc ttcttcgttg agaattttgg caaattccca
    55201 cgccaatttt tcacggcttt tgtaatgacc gtcatagaga gtgtcgatca ttgtcatcgg
    55261 gccgggtaat gcccatttga ttggtttgtc ggtatgcgca cgcaagaatt tggcatcgtc
    55321 cacaaacacc gatttcgggc gggaaactgc ccccaccacg ctcggcacgc tggcatcgta
    55381 acggttacga atgcgcacga tttcacgctt gctaaaatcc accccttcca aatgctcgat
    55441 aaaggtggtc acaaagtgct ggcgggtctg ttcgccatca ctaacaatat caatccctgc
    55501 cgcaatttgt tcggcaaggg aaacaaggag ggcatcacgt ttggcttgaa gtagttcctc
    55561 gccttcaaat ttccaaggtg accacagttt ttccggctcg gcaagccacg aaggttttgg
    55621 taggctgccg gcggtagagg ttgggagaag aatgttgctc attttgaatt ttcctataaa
    55681 aagtagggtg ggcgtaagcc caccattggt tatatctcat tttatggtgg gcttacgccc
    55741 accctacgtt tattcctccg tcgcccaagc ctctaaaatc gcttggtaac gtttaataaa
    55801 atgctcttcg gtgtatttac cctgtttgat cgccaactgg gtgcgttctt cacggtcata
    55861 ttccactttg gtgacggaat aatcttggta agtcaggctg cctttataga cctgccctgc
    55921 gaccgaattg gcattgtaaa tttccggacg gtaaattttt tggaacgctt ccattgtggc
    55981 aatcgtgctg attagctcta agttagtgta atcattgagt aaatctgcat tctcatcaaa
    56041 gtagaacgca tagggtgcaa cggattttgg cggcataaag taacgtactt ttaagcccat
    56101 tttcgcaaaa taggcatcag ttaatgaata actatcttgc agatattcca cacctaaaat
    56161 tgggtgaacg ttagtggttc ttgtgtaggt acgggtggtt gccacgctta aacagatcac
    56221 cggtggtttt ttatattttg cggtatattc aggcgatgcc aataaatgct taaacagctt
    56281 gccgtgtaac tcgccatagc cttccggcac gctaaattgc ggtttgtctt tattgtgatc
    56341 taacaacaat acgctgaaat cgtaatcacg cacaaaagaa gagaagttat taccgataat
    56401 gccatcaatg gttttgccgg ttttgtagtc gataacatag gttttcagcc actcaatcgc
    56461 agggaaaaac tcgcctttgc cttccacatc aatatccagt gagacaatat ccaatttcac
    56521 cgaataacga tccgcattcg ggttatccca gttcgctaaa tcgttaaaac ggttattgat
    56581 catcgcaatc gcattttgca ggttctgttt gcggttttcg ccacgggcaa ggttggcaaa
    56641 gttggtggtt aaacgggtgc tttgctccgg ttggtaatct tcattaaatt caatagtatg
    56701 cacttggcat ttaaaatttg ttgtcatttt attgtcccct ttatttttca gatagcttat
    56761 tgaaccacaa atttttattg aataaaaatg atatattttt gaaatgtata tgaaatcaat
    56821 tcatattgca tttgcaaatt taatcagaaa aaacaccgct tgtgtttaaa acaacttact
    56881 tgcccagcct aatttagaac ctaatacagt aaagtagcta taatctttta aatggagcag
    56941 ctgtaattta tccgggcttt tacgcaccaa gactctatct tcaggcgtaa agtgcatatt
    57001 cacctgcccg tcacaaatca cttctaaatc aggggtatta tatttggcaa aacgaagcga
    57061 aatttgacta tcgccatcaa ccaccaaagg acgagaagaa agagtgtgag ggtgcatcgg
    57121 cactaatgcc attgcattca tattcggggt taaaatcggg ccaccagcag aaagtgaata
    57181 ggcggttgag cctgtaggcg ttgccacaat caagccatct gcacgttgtg aaaaagcgaa
    57241 ttttccgtca atataaactt caaattcaat aattcgagcc acttgggttg ggtgaaccac
    57301 aatttcattc aaggcattat ttgcggcaat aattttaccg ttgcgctcaa tgaaagcctc
    57361 taacaggaat cgctcttcaa tcacatactc atttttgact aagcaactat aaagctgttc
    57421 aaaagccgtt tgaggtgcga tatcggttaa aaaacccaga ttgccacggt taatgcctat
    57481 cagtggcact cggtatttag ccaaagctcg ggcgatgcca agcatattac catcgccacc
    57541 tatcacaatc accaactctg cgcgctgccc aatctgatct aaactgtagc tttccttaag
    57601 ctgtaactga gtggcaacct ctgtttccac taaaatttga taatcacgat cttttaacca
    57661 attataaacg gcaagatgtg tttcaaatgc actgtcgtgg cgaggtgtgc caacaatcgc
    57721 aatcacttca aacggttttt gctgattcat ttcaattcct taaagaatgt gggtttgata
    57781 ccattgatta agtagaatac ctgcgtttac cgccacattt aaaccactat ttaacggatt
    57841 attaaaggaa agctgtattg ttgtgtcttc tgcgtaagcc acatcacttg caggaatctc
    57901 acttaataca aaaaccacct tttccgccag cttaattttg gttaaagaag gggcttgctt
    57961 atggcgtgtg aggtggacaa tttgataacc ggcttggcgg agttgtacca aagcaatatg
    58021 cttgttttta gtttctaacg ctcgcacaaa ttccaaacca ccctctgcga cacgagctgc
    58081 agcactggag tttaagctat ccacattttc agtaataatg cctttcacac cataaaaagc
    58141 acacgttctg atgattcccc ccacattctg agcattgttt acaccatcta acagtaccaa
    58201 gcaatcttgt tttttcggca cttgtaaata gccctctagc acaaatgaag ccgttttttt
    58261 caccaataag cacatatcgc cgtgatgttc agtaccggtg actcgctcca tctcttcacg
    58321 gtcaataacg tgataggctt ttttgtgctg agccaaatag ctcattaaat cgcctaattt
    58381 ttttgccccc tccactgttg cccataaacg tacaatagat tcaggacgtt gttggaacaa
    58441 actgatacag gcattttcgc catagacttt catctcttcc aagcgatttt tcttaatttt
    58501 ctcaggcgct ctcggtgaaa gcgggccgtt ttttttctct ttaactgagc tattcccacc
    58561 ttttacccaa atttgcacac taccttcacc actggctttt ttgccttctg ctggataaat
    58621 ctgctcagag cgtgaataag cctcgtcacg cttaaaatgt agcttatgcg gtctgtcact
    58681 tttaccttca tttcctcgca ttttgccttt atctgaaaaa cggggggaac actcatctga
    58741 acggcgttct tctctgtgtt taaaacgagg ttggttattt tctttaaatt gcatttttag
    58801 tacctaaatg ggtggcttga atgggaggta ttataacgaa tccaaactcc aagcggttag
    58861 aaaaagccat ttttttgcaa aatttttcac agattagacc gcttgttgtt tctttatttc
    58921 gctacattct ttataattcg tgctttatta tgttctttaa aatctggtgg aaatatgaac
    58981 ccaatgttaa acattgctat tcgtgcggca cgaaaagcag gcaatattat tgccaaaggc
    59041 tatgaacaat cgcctcaaga tacacaagtt ttacaaaaaa atacgaatga ttatgtgact
    59101 gaaatcgata aagcagcgga agcggcaatt attgatgtga tccgtaaatc ttaccctgaa
    59161 cactcgatcg tgaccgaaga gtccggcgtg ttaaacggta gcaatgaaaa tgtacaatgg
    59221 gtgatcgatc cattagatgg tacaaccaat ttcgtaaaac gcttacctca ttttgctgtg
    59281 tcgattgccg tgcgtgaaaa cggacgtaca acagtagggg tagtttacga tcctatccgt
    59341 aacgagcttt tcactgcggt gcgtggcgaa ggggctaaat taaacgagtt ccgtttacgc
    59401 attgatgcag aacgccgtga tttaaaaggc actgtaattg caaccggttt tcctttcaaa
    59461 gtcatcagac atcgtgatgc acatttaaat atgcttgaag gcttaatgaa taacggagta
    59521 gctgatttcc gccgtaccgg ttctgccgct ttagatcttg cctatgttgc agcgggtcgt
    59581 gttgatggtt tctttgaaat cggcttaaaa ccgtgggatt tcgccgccgg tgaacttatt
    59641 gcccgtgaag ccggtgcaat tgtgactaac tttgttggcg gaacagatta cttgaaaaca
    59701 ggtaatctgg ttgttggtaa cggccgtgtg gttaaagaaa ttttaaatag cattcagcct
    59761 actttgaccg aagaactcaa agcttaattt aatatcatct attatttgat ggttgtgggt
    59821 aataaaacat tatggaaaag aagtatcctc tgttaagcga aatcaactca ccggaagatt
    59881 tacgtttact ttctaaagac cagcttcaaa ccgtagttga tgaactgcga gcctatttat
    59941 tggaatcagt cagtcaaact agcggacatt tagcctctgg cttaggggta gtagagctta
    60001 cggtagcttt gcattatgtt tatcaaacgc ctttcgacca attaatttgg gacgttggtc
    60061 atcaagctta cccacataaa atccttactg ggcgccgaga tcaaatgcac actatccgcc
    60121 aaaaagatgg tattcacccc ttcccttggc gtgaagaaag cccttacgat gtgttaagcg
    60181 ttgggcattc ttctacttcg atcagtgccg gacttggcat tgcggtggca gcagaaaaag
    60241 aaaatgccgg ccgtaaaacc gtctgtgtaa tcggtgatgg tgcaatcact gccggaatgg
    60301 catttgaagc attaaaccac gcaggtgcat tgcataccga tatgttggtt atcttaaatg
    60361 ataatgaaat gtcaatctct gaaaatgtcg gggcattaaa caaccacctt gcccgcattt
    60421 tttctggttc gctctatact tcagtgcgtg acggcagtaa gaaaatttta gataaagtgc
    60481 ctaccatcaa aaactttatg aaaaaaagcg aagagcatat gaaaggggtg attttctccc
    60541 ctgaaagcac tttgtttgaa gagttaggct ttaattatat cggcccgatt gatggacata
    60601 atattgacga gttagtcaaa accttgagca atatgcgtga gctgaaaggc cctcaatttc
    60661 tgcatattcg cacgaaaaaa ggcaaaggct acacacctgc ggaaaatgat ccgattggct
    60721 accatggcgt tccgaaattt gaccctaccg cagccgagtt accaaaatca aaagcagcac
    60781 ctacttattc caatattttt ggcgattggc tatgtgaaat ggcagagcgt gatccgaaaa
    60841 ttatcggcat tacgccggca atgcgtgaag gctcgggaat ggtagaattt tccaaacgtt
    60901 tccctgaaca atattttgat gtggcgattg ccgaacaaca cgcagtgact ttcggggcag
    60961 gcttagcaat cgcaggttac aaaccggtag tcgcaattta ttccagcttc ttgcagcgag
    61021 cttatgacca attaattcac gatgttgcta ttcaaaacct gccggtgatt tttgcgattg
    61081 accgagccgg aattgtcggc gctgacgggc aaactcacca aggtgcattt gatttaagtt
    61141 ttatgcgttg tattcccaat atgaccatta tggcaccgag cgatgaaaat gaaatgcgaa
    61201 aaatgcttta taccgcttac acgatgaata cgccaagtgc tattcgttac cctcgaggca
    61261 atgctaaagg ggtaaaactt gagccaatgc aaagacttga agtaggtaaa ggaaacatta
    61321 ttcgtgaagg taaaaaagtt gcgattttaa attttggtgc tttgcttgat gaagcaaaga
    61381 ttgtggctga aaaacataac tacacgttgg tagatatgcg tttcattaaa ccattagatg
    61441 aagcattact tcaaaaagtg gcggattcac acgagttgtt agttacgctt gaagaaaatg
    61501 ctattcaagg tggcgcaggt agttttgtga atgaatattt gcaaaatatc ggcaaaatca
    61561 aaccgcttgt aatgcttggt attcctgact ttttcgttcc ccaatctact caagctgaag
    61621 cttatgccga tcttggatta gatgcccaag gcattgaagc gaaaattcaa aaattcgata
    61681 tttaacttta aaaagtccct ttgattgacg cagaacaaag ggattttttg atgaacctca
    61741 cattttcagt aaattattca cacaaatcta acaattcatt ttactttatc ctcactcctc
    61801 acttacaatg gcacgccttt atcagttctg ctaaaaatga tcatttatct caatttatag
    61861 gatttctact atgttgtggt tctttttctg tgtagccgtg cttgttcttg gctactttac
    61921 ttacggaaaa atcattgaaa aaatcttcgt gattaacccg aaaagagcaa cgccggctta
    61981 tgcaatgaac gacggtgttg actatatgcc aatgtctaaa accaagattt ggctgattca
    62041 attattaaac attgccggta ccggccctat ttttggacca atacttggtg ccttatacgg
    62101 accagttgca atgctttgga ttgtgattgg ttgtattttt gccggtgcag tacacgacta
    62161 cttctgtggt atgttaagta tccgcaacgg tggcgcaacg atgccaaatc tggcagggaa
    62221 attcttgggt cgtccagtca agttattcat caacgtaatg gcgctcatct tgcttttatt
    62281 agtaggcgta gttttcgttg caagccctgc tcagttactc tctaccatca ccatggatat
    62341 tgcaggtgca acccaaagtg caatggaatt aggtgatgtt gaagcaatta aagaatctgt
    62401 agcatcaggt ggcgtaaccg tttggggtat ggataaagca accgtgattt ctgtgtggac
    62461 gttaatcatt tttgcttact atattcttgc tacattacta cctgttgata aaatcatcgg
    62521 tcgaatttat cctttcttcg gagcattatt actctttatg tctgtaggta tggtatatgg
    62581 tctagtcagc gctcacttaa gtgcgactga tcctatcgac ttcttccgta cagtgaatgc
    62641 agacggtcaa ggcttaacgt gggaaaaatt cacccaaaac ttccaagtga aaggtgatgt
    62701 tccaatttgg ccattactat tcttaactat ttcttgcgga gcattatccg gtttccacgc
    62761 aacccaaacc ccattaatgg ctcgctgtgc gcaaaatgag aaagaaggtc gttttatttt
    62821 ctacggtgca atgattactg aaggggtaat tgcattagta tggtgtgcag taggtctttc
    62881 attctatgaa aacccacaag ccttacaaga tgcgatctct gccggttcac cgtctaaagt
    62941 ggtatatgac agctcgttac acttcttagg gtttatcggt ggtatttttg ccgtattagg
    63001 cgttgtagta ttaccaatca cctcaggtga cactgcattc cgagccgctc gtttacaact
    63061 agcggaaatc tttggtttag aacaacgtac cttagtaaaa cgtttgtata ttgccgtacc
    63121 attattcgta cttggtttca ttgtctcaaa agttgatttc agcgtattat ggcgttactt
    63181 cacttgggca aaccaaatga ctgcaatggt tatgttatgg actgccgcag gttacttata
    63241 ccgctataaa aaattccact gggtatgctc gattcctgca tggtttatca ctaccgtgtg
    63301 tgcaacttac cttgcgaaca acaaaatcgg cttcggttta gattatgaat tatcagttta
    63361 tatcggtttt gcgattacgg tagtttgtgt tatttgcttc tttgctttcc tcaagccatc
    63421 tgaggctcgt gatgaagatg cttatgtaac aaactaattg cttgcgtaaa atgctaaaaa
    63481 tggggacaat ctagtccccg tttttattgg ttttattatg cgattttttg acactcatac
    63541 tcacctcgac tatctcgcag aaagcctgaa tttaagcatt ccggaattgg ttgagaatgc
    63601 caaacagcat caggttgaat gcattcttat cgttgccgta tttgcaaaaa attttgcaaa
    63661 agtgaccgct tgtgccaaac aaaaaccgga aaatttggtg tatggattag ggttgcatcc
    63721 actgtatatt caacagcacc aacaacaaga tttaatctta ttggaaaatt tgctaagcca
    63781 acaagatcca cagtgtaccg ctattgccga aatcggtttg gaaaaagcgg taagtgaagt
    63841 ttctacccct gaattatgga aaaagcaatg tgaattttta gaggcacaac tttcccttgc
    63901 gaaaaaattt aatttacccg ttaatcttca ttcacgtaaa agccacgatc aactttttgt
    63961 gttcctcaaa aaagcccaac taaccaaaac cggtgtggtt cacggctttg ccggcagcta
    64021 tgaacaggca aaacgttttg tcgatctcgg ttataaaatt ggtgtggggg gaactattac
    64081 ctatgaacgt gctaacaaaa cccgtgaggc tatccgcaaa ctacctcttg aaagtttact
    64141 actggaaacc gactcgcccg atatgccggt gtttggcttt caaggccagc cgaaccgacc
    64201 ggaacggctt ttagtgactt tcaatagtct atgtgaatta agaacagaat caccaaatct
    64261 gattgcagaa accatttggc agaatagcga aaggttattt ttttacgctt gatttagtcg
    64321 ttgctttaga tgttgccaaa tttgcgagcc ataatttaca ttaaaattag agcaaattgc
    64381 ttcttcttgt gtttttatgt caagattttc acagcaattt acaatttttt gccaataaac
    64441 gaccgcttgt aattcaaaat gtacacccga caacagatag taacctcgcc ctagctctcc
    64501 ctctatcatt gctactgagc catcaggata ataagccaac gggttgtaaa tcactgttgt
    64561 tgaatttggt tcaaaacagc aaccaccgtg ataataaaac ggcatttttc caccctctgc
    64621 aagtgttact tcaactatcg ctttgctacc aatgttttta tcgtaaagtt gcccgttggt
    64681 aaactgcggc agactgcctt tcgcaatgcc cgcaatgcca ttaaataaag ctagttctcg
    64741 attaccattt acgctatagt cacgccctac aaaattcaat tcagcacagc cataataagc
    64801 tccggcacag ataccgagat aagctccacc ttgttcaata aattggcgga ttctacgatt
    64861 gccttctccg tttaattttt tgcagtaagg taaatcggct ccaccgggca tgattaataa
    64921 acagccatcg gaaaacttgc tttgaataat ttgtttggca ttgatgagat aagccggacg
    64981 ctgtaaatgc tgttttactg ccaataacag tgattgaaca ccaatttcac tgctaccttc
    65041 atcacaataa atataaactg gttttaccat tttaaattca ctcttaccct aaaagacatc
    65101 ttcttatata atcggttgag aacattttaa ccatattaaa ggagaggatt atgttcacta
    65161 cgcaattaat tcaaactaaa cgttggctag aagccaatag tataactaca ttttggttga
    65221 aaacttttat tggagcaaca ctgcttgcta tttttgcaca aatttctgtg ccgatgtacc
    65281 ctgtacccat tacagggcaa acacttgctt taactgtggt tggttttgca atgggtcgta
    65341 aagccgcaac tgctgcagta ttactttatc tttttgaagg ggcgattggt ttacctgtct
    65401 ttgccggcgg tgcttcaggt ttccatcatt tctttggtcc aacaggcgga tacttattag
    65461 gctatattcc aaccgcctat ttcttaggct attatagcga taaaggcgta ttaaactctt
    65521 tttggaaaag tttatttgtc gccttaattg caagtgtgat cacctttgct ttcggcttgg
    65581 ctcaactttc tttgtaccag aaggcacagt attacaagcg ggcttatatc catttatttt
    65641 aggtggtgtg cttaaagcac tcctagcaag tgttttggtt agcccaagct acaaattctt
    65701 ctcgaaactc taatctttct aaaggctttg ttacggcaaa ccctttttca attctgattg
    65761 ctctattttt tactacattt caaaatcacc ttcatttgat tttttaatca aaatagccaa
    65821 aagttatttt ctcaacgcta ataataactt ttttgcctaa aaggtattaa atcggtacaa
    65881 tgatttaata ctggcagaat gtttgaagga gcattgatga atagcactaa attttactcc
    65941 ctttattcag gtatcttttt tctgtttttc ggctacggtt tatttctaaa ttcagcaggg
    66001 atcaaactgg cagaaatggg gataacggac atcatcatcg gtttacttaa cgctgctttc
    66061 tttattgggg cggcattaag cactattttt gctcaccgca ttgtatcaag tgttgggcat
    66121 atccgttcat ttagcgtttt ctgtgctgtt tttgctatcg ccgctctcgg tcatattatg
    66181 attgatactt tgtggatctg gggcgtgtta cgaattattt tgggattctg tcattatagc
    66241 ttgctgcttt tagtcgaaag ttggttaagc gaaaaaacca atgtcgatac cagaggcaaa
    66301 gtgcttgcca cttataacat tatcttctat ctcgccttta ttttaggcgt aagtttatta
    66361 agtttagaac ttagtagccg aaacattttt atcttatcta ccattttggt tgtgatgtcg
    66421 atgatcccaa ttgctttaac taaaatggtt cagcctgata ttccggctcg agagcgcatt
    66481 agtattccta aactatttgc gatttcaccg ttagccttag caaccagctt tattagcgga
    66541 atgttggtaa acggcttttt tacaatggcg tcagtctttc tgctgaagtt tagcttttca
    66601 ttaagtgaaa tctcgcttta tttgatgatc tcgatgatcg gtggttttat cagccaaatg
    66661 ccgatggcga tattatcgaa tcgtattggc agacgtaacg ccattttagc ttgttcagtg
    66721 attgccactt taaccgcact tgccggatta tttgcaattt tccaagaaaa tttgaccgcc
    66781 tggggacagt atattatcgc ctttttcttt ggctgtagtc tgtttagctt atatgctttg
    66841 agcattgccc gtgccaacga tgaattgccg aataatatga acacggttga agtaagcagg
    66901 ggtttactgt tttgctatgg tgtgggggcg ttagttgctc caccgcttat cggttttgcg
    66961 atgagccttt ccgctgaata tggcttttat gcactttttg gactgttctc acttagttta
    67021 tttatttgtg ctttccgcac caaatcaatt ccgaaagcgg aacgagcaga gatgcaatat
    67081 gctaccccaa ttgcaaccgc aagcccactt gaagaaattg aagttgttga ggacgcactt
    67141 attccatttg atgaagaagc ggtacaagag taccaggctc agcttgaaat acttgaacaa
    67201 gatccacaaa cagaaaatga aaatattgag cttgatgaag gggccgctga aaacagcaaa
    67261 gtttaatttt tctttgtttt atgctagaat ttcagtgctt ttattcccca cttgtaaggg
    67321 aaataataag caaattgcaa aattttaatc aaaaaagacc gcttgtaggc ggttttttca
    67381 ttcaaacaac acaagtaatc tctcgtatgg attaccactg taaggattta ttatgccaat
    67441 tattacttta ccggacggtt cacaacgttc atttgacaac ccagtttctg taatggaagt
    67501 tgcccaatct atcggggcag gtttagcgaa agccaccatt gccggtcgtg taaacggtga
    67561 acgccgtgat gcgtctgata tcatcagcca agacagcaca cttgaaatca ttactgccaa
    67621 agacgaagat ggtttagaga tcattcgcca ctcaaccgct cacttgttag gtcactccat
    67681 caagcaatta ttcccagacg ttaaaatggc tatcggcccg actatcgaaa acggtttcta
    67741 ctacgatatc gatttagacc gctctttgac tcaagaagat ttagacgctc ttgaaaagcg
    67801 tatgttagag ctggcaaaaa ccaactatga cgtggtaaaa cgcccggtaa gctggcaaga
    67861 agctcgagat acctttgaga aacgtggtga gccatacaaa atggcgattt tagatgaaaa
    67921 tattgaacgt acggcaacgc ctgcgttata tcaccacgaa gaatatattg atatgtgccg
    67981 tggtccacac gtaccaaata tgcgtttctg ccaccacttc aaattacaaa aagtagcggg
    68041 tgcttactgg cgtggcgaca gcaaaaataa aatgctacaa cgtatttacg gtacagcttg
    68101 ggctgataaa aaacaattag ccgaatattt acaacgtttg gaagaagcgg caaaacgtga
    68161 ccaccgccgt atcggtaaag cgttagattt ataccatatg caagaagaag caccgggtat
    68221 ggtgttctgg cacaatgacg gctggacgat tttccgtgaa cttgaaactt ttgtgcgtac
    68281 caaattgaaa gagtacgatt accaagaagt aaaaggtccg tttatgatgg atcgtgtgct
    68341 ttgggaaaaa accggacact ggcaaaacta cgcagattta atgttcacta cccaatcgga
    68401 aaaccgtgaa tatgcaatta agccgatgaa ctgcccgggt cacgttcaaa tctttaatca
    68461 aggcttgaaa tcttaccgtg atttaccgat ccgtatggcg gaatttggtt cgtgtcaccg
    68521 taacgagccg tccggttcat tacacggctt aatgcgtgtg cgtggtttta cccaagatga
    68581 tgcccatatt ttctgtactg aagaacaaat cgagtcagaa gtaatcagct gtatcaaaat
    68641 ggtgtacgac atttacagca ccttcggttt tactaacatt gcagtaaaac tttcaacccg
    68701 tccggaaaac cgtatcggtg atgatgcaat gtgggacaga gcagaaaaag gcttagccaa
    68761 cgccttacgc aacaacggac ttgaatatga aattcaagaa ggcgaaggtg cattctacgg
    68821 gccgaaaatt gagtttgcat tgcgtgattg cttaggacgt gaatggcaat gtggcacagt
    68881 gcaacttgac ttcgctctac cgggtcgttt agcagcctct tatgtagcag aagataatgg
    68941 tcgccgcaca ccggtaatga ttcaccgtgc gattttaggc tcgatcgaac gtttcatcgg
    69001 gattatcacc gaagaatatg ccggtttctt cccaacttgg cttgccccaa cccaagcagt
    69061 ggtaatgaac attaccgaca gccaagcaga ttatgtgcaa caagtggtga aacagctttc
    69121 tgatgcaggc attcgtgtga aagcagactt acgcaacgaa aaagtcggct tcaaagtgcg
    69181 tgagcacacc ttacgccgtg tgccttatat gttggtttgc ggtgataaag aaatcgccga
    69241 aggtaaagtg tctgtgcgta cccgtaaagg tgcagactta ggtacttacc tcgtttcaga
    69301 cttagttgaa attctaaaaa accaaattaa ggctcgtgag ttgaaattat taggcgaaga
    69361 gtaataacat aaataaaagc agctaccttt ctgacataat cgaggggtag ctgctttttt
    69421 attagaatag gaaaatgatt aatgcccact taacactttt gccggttcta atttagcggc
    69481 tcggttggca gggtataagc tggcaaaaag gcttaggata atcgtggctg ccaatacata
    69541 gacgacatct tgccaatgta attcacttgg taagaaatca acaaaataaa ccccgtctga
    69601 aagcaatttc acctcaaaga atgcttcaat cgctttgata atagcggtta aatttagcga
    69661 taaaattaca cctaaaatca gcccgaataa cgcccctttc atacctgaaa ttaagccata
    69721 ccataagaaa atgcggcgga taaaaccgtt atttgccccc agtgtccgta aaatcgcgat
    69781 atcgccttgt ttgtctttca ctgccataat caaggtggaa ataatattaa aacaggcaac
    69841 gccaatcacg agaaccattg caatgtacat cacggtgcga atcagttgaa tatcgttata
    69901 catataaccg aatttatcaa tccacgtatt caaataaagc ggttgggtat agccgttaag
    69961 ttgtggcatt tcaagctgtt gtacatcaaa cggattggca aggctgattt caagccctga
    70021 cacttcattc gcttggtatt ccatcagctc ttgagcttta ttcagtggaa ttaaggcata
    70081 actgtgatcc agctgcccat ctagccgcaa aatgccggtt acgtttaggt taaaacgcaa
    70141 gggctgggct aatttgccgt cttctgttgg ctgaggaatt aaaagcgtaa cttcgtctcc
    70201 tgcctcaact tctaacgctt tggcaatacc ggctcctaaa atcaagccat cttcatcggc
    70261 ttgaaattgc tgattgaacg cttgccattg ctcgggtgga ataaattggc ttaattggct
    70321 ggcctgatct tgctttttag gatcaacccc tcgcacctgg gcgattttaa gctgagcccc
    70381 attttcaatt aaggcggtaa agctgacaaa aggcgaacta gcggtcacat tttgcgattt
    70441 ttttatcaat gcctctaatt ttttgctatc aaaaattggt tgaggctgat tgccttgaaa
    70501 cgaaaccagt tcagcgtgtg gcacaaccga aagcacacga ttattcagct ctcgctcaaa
    70561 gccgttcatt gcacttagcc cgataattaa taccgcaacc ccaagggcaa taccgatgtt
    70621 ggaaaagaga gcaatcagtg aaaccagttt gtttttctgt ttgccccgtt ggtaacgcca
    70681 gctaatgaaa aacggcgtac tcataagctc ccctcgctta acacgccatc tcgcattaca
    70741 agactacgtg aaagtttatt cgctagattt aaatcatgcg ttactaataa aaacgcaatg
    70801 ttctgctctt ggttgagctg ttgaatcagc tcaaaaatgc tttcagtggt tttttggtct
    70861 aaattaccgg tcggttcatc ggcaagtacc agagccggat tattaaccaa cgctcgggca
    70921 atcgccaccc gttggcgttc gccgcctgaa agtgctgatg ggcgatgtgt cattcgatga
    70981 gctaatccga ccgcttgtag cattttctcg gcacgattgg cagcttcagt tttgttctgt
    71041 ttgccgatca gcatcggcat catcacattt tcaagggcgg taaagtctgc cattaagtga
    71101 tgaaattggt acacaaagcc taagttttgg ttacgcaata acgctaattt gtctgaactg
    71161 agctgttgca gagattgccc tcgaatccag acttcaccgg tgcttggctg atctagcccg
    71221 cctaatgtgt gcaatagggt gcttttgccg gaacctgaac taccgacaat cgctaccagc
    71281 tcaccttcgt tcatcgaaaa tgacacctct tttagcacct gaactttctg ttcgccctca
    71341 tcgtaaaatt tgctgatatg ttcacagcga agtaattctg tcattttatt tccgttctta
    71401 ttattcatat ctcaatgcct gtgccggctc aatttttgag gctcggtatg ccgggtaaag
    71461 cgtgcaaagg agtgaaagca acatcgacac ccctacaatg accgcaattt gcgtgcctga
    71521 aattagggta ggcagatgga tgctcgggtt taatagcagg ataatctgat ctaaattgta
    71581 ggcgatcaat acgccgagca aaccaccaat aatcgagcca attactccga caatcgcccc
    71641 ttggaacaca aaaatctgca tcacttgttt tttggttaag ccttgggttt gtaaaattgc
    71701 aatttcgccc tgtttgtcta ccaccatcaa actgagtgaa gtcacaatgt tggaaattgc
    71761 aaccacaata atcaggctga tgagtaagcc catcatattt ttttccattt tcaccgcttg
    71821 gaaaaattcg cctttttgct cacgccaatc actgatttgg tagcgttctg catcgaaata
    71881 ttggctaagt tcggtaactt ggaaaggatc ttgcaaatat aaacgcacgc cttgtacttg
    71941 atcttcgctg atgcgaagca aacgcccgac atcagctaaa ttagcaaaga gggtaaattc
    72001 gctcgcttca cgattagatt gataaacgcc cgaaatttca aacaaacgct gtaccggcac
    72061 tcgcccaagt ggcgtatatt ggctgttttc agtgatcatt aagcggagct tatcgcctac
    72121 cgtaacgttc aatttattgg ctaaacgaga gccaattact accttaaatt caccgctagg
    72181 caataatgcg gggatatttt ccgccactaa caacggatcg tctgtggcat tttccacgcc
    72241 gattaactga ccggcgttaa tgccttgtga actttggata atcacattcg cacggttaat
    72301 caccacactt tgcttggcaa attcaggtag agccagtttt tcacctttgg caaaatgccc
    72361 ctcttgaggg gtgatgatag cgtgcggcaa ggtggatagc agattggttt tctgcatatt
    72421 ttccaaaccg ttcataaccg acagcacaat caccaatgcc attacgccca gcacaatgcc
    72481 aaggctggca agattggtga ctaaccgccc gaaacggtca gcacttttcg atctaaaata
    72541 gcgaaaagca ataaaaaaag gggttaaatt catctgtttt tctaaaatga tattggtagg
    72601 ggcgggtttt atacccgccc tctcattcta ttaatattag ggctggcaca ggaccagccc
    72661 ctacttcaag ctacataccc gttgctacaa actcttccat attttgtgtc actttattca
    72721 ctagtgttgt aaccgcagaa tcgcttgccc acgcaacgtg tggggtaatc agtaaattcg
    72781 gtaaacgttt tgcggctaac attaaagggt tgtctttttc aggcggctct ttcactaaaa
    72841 catctaacgc agcgccggca atcttgcctt gctctaatgc ctcaagcaat gcctgttcat
    72901 caatcagtgg gcctcgaccc gtattgataa tataagcggt cggcttcatt aaggctaagg
    72961 tttctgcatt aatcaggttt tgagtctgct cggttaaagg gcagtgtagt gaaataatat
    73021 ctgcttgttt gaatacctct tcaaaggcgg tgtagccttc tcgaatttca gttgcgcctt
    73081 gatgttctgc aaaaataacc tgcattccga ccgcttgtgc cagccgtgcc acttcagccc
    73141 cgatgttccc tttaccgaaa atgcctaagg ttgagcctcg cacatcgtgg atcgggtaat
    73201 ctacatagca aaattggccg caagttgccc agcggtcaga cgtaattaaa tcacggtgat
    73261 aatcggctaa acgatgtttc agggagtaaa tcataccaat gacgtgttcc ggcacggtaa
    73321 cgctggaata gccggttaca tttttcactg caatccctaa ctcttttgct gccgctaagt
    73381 ccacattgtt cgtgccggtt gctgtgatcg caattaattt cagctttggt aatttagcca
    73441 gcaagtcacg ctggagtaac actttgctgg taatgataat atccgcttct tttacccgct
    73501 caaaagtttg atcggcagag gtggtggcat attccgtcca agtatgtgga aaattcggac
    73561 gaggaatatc gtgagtggca ggaataccgg tacggtcaag aaaaacaata tttagcattt
    73621 ttttctccta ttctgtcttt tacctttcta actcccttct gagctacctg agcgtgtttt
    73681 aatgggtagg aaaatttact ctgagcgaag cgaatgtaaa tttttcgtta agcccattca
    73741 cactaagcga agaaaagtag cgaagtaggg tcgcctttct ttgcctactt tctttggcga
    73801 agcaaagaaa gtaggaaagg atttaatgcg gagaaagttt atttggaagt atcaatttct
    73861 tcaaagctct taaccaactc atcaatcgct ttcatctgtg aaacaaaggc ttctaatttt
    73921 gacagcggta atgcagatgg accatcacat ttcgccgagt ttggatccgg gtgagcttct
    73981 aagaacaagc cggctaaacc aatcgccata ccggagcgtg ccagttcggt tacttgatct
    74041 ctgcgaccac cggaagccgc accgaatgga tcacggcatt gtaatgagtg agtcacatca
    74101 aaaatcaccg ggcaaccttt cgacactttt ttcataatgc cgaaaccaag catatccaca
    74161 actagattat cgtagccaaa gttagtgcca cggtcgcaca aaatcacttg atcgttgccg
    74221 cattcagcaa tcttttctac gatattcccc atttgacccg ggcttaaaaa ttgcggcttt
    74281 ttaacgttaa taaccgcacc ggtacgagcc attgcttcca ctaaatcggt ttggcgagcc
    74341 aaaaatgctg gtagttgaat cacatcaact acttctgcca caggtttaca ttggtaaatt
    74401 tcgtgaacat cggtaatgat gttcacgcca aaggtttgtt ttaattcttg gaaaatcttt
    74461 aagccttctt ccattcccgg tccacggtaa gagtggattg aagaacggtt tgctttgtca
    74521 aatgaggctt tgaacacata aggcacattt agtttttgcg tgacttcaac atattgctca
    74581 catactctaa gtgccatatc acggctttcc agcacattca taccaccaaa aagcgtaaac
    74641 ggtttgtgat tagccacttc aatattgcca acttttacaa ttttatctgt catagggagt
    74701 ccttgtttct tattttctgc ctagcacggc agagccgtac taggttaatc atagctcagc
    74761 ccctttgggg ctacttctca gcttaatgca ccacactttc ttggcttttt tgttgcagtc
    74821 ctttcacttc catttttaaa atttcggcag aaggatcttc agggcattgg tcaatgaaat
    74881 aattaatatc ttctaatgct gcttggtagc aatccatact tgccagtacc attcctcggt
    74941 ctctgatttc gtacggatct tccgggctaa atgccaagcg gtattcaatc aagcgtaagg
    75001 tttcttcata tttgccttca cgggtaagtg ccattttaaa cacagtttcg accctttcca
    75061 gcaactcttg tggttctgct cgtcttaaca aatcaggggt aacttctacg ccaaagccca
    75121 tttctccttc cagccattta ttcagcattt cgatggtgag aaattcaccg ttccacgggt
    75181 tgataaaacg cactttggtt gccccgttcg gctggtgtat ttcagcccgt aacacaagct
    75241 gagtcggaaa attaaccggg taaagcggca aatccaatac ggcggataaa taaagcgcca
    75301 ccgccccaag tgaaaccggc attccacgcc gtttgcgaat tacttgattt agcaacaaat
    75361 tttcggtgtg gaaatagtct tcatagtagc aatgaaagcc ccattcacga tagactaaat
    75421 gaagtaattg gttaattctc tcttcatcgc cttcgccatt cacgttatag cgagcttttt
    75481 tcaccaacgc agacatctga ccaaacactt gttgctcact tacattctta tcaatgagcg
    75541 tagttaatcg taaaatttca cgataaagaa actttttcag ctcggtttcg ctgatggtta
    75601 ctttcggatc ttccaactct tttaacaatt cttcaataat atcgtccatt ttctgcctta
    75661 ttttaaaatc gctttggtta ctcggtcatt gccggcataa tcttgagcag tttctacctg
    75721 ttcccacaag tgtaaatcaa ataaatctcg aaccaagtta ccttgtttcc agccgtgttc
    75781 cagcattaac gccccttgcg gttttaagtg aagcggtgca ttttcgatga ttttttgcaa
    75841 atcgctcaac cccttattat cggcaactaa tgcggttaaa ggttcaaaac gtacgtctcc
    75901 caccgtcaaa ttttcgtccg attcatcaat ataaggcgga tttgagacaa ttaaatcaaa
    75961 ttgttgattt gcaagcgaac tgaaccaatc gctttgtaaa aatgtaactt gatttaagcc
    76021 taagtttcgg cgattttctt ctgccagttg caccgcctca ttttggaaat ccaccccgat
    76081 aatttgggct ttctcgccta attcactcgc cagtgccaac gcaatcgccc ccgtgccggt
    76141 accgagatcc agaatttgca acattttctg atttcctaac cgcttgttag catattccaa
    76201 cgccaactca accagtcgtt ccgtatcagg gcgaggaatc agcgttgccg gtgaaacctt
    76261 taacggcaac gaccaaaatt cccgatagcc taaaatatat gccattggtt cacctttggc
    76321 acgccgagct aatttttccg ctaattctgc aagctcgctt tcagaaagta gggtttccga
    76381 aaaagcaaaa atggccgatt ttgaacgttt tgtgactgct tgcaatagca aatttgcatc
    76441 aaattttgcg tttaggtatg gatctgcccc gctattttca agtaattttt gctcagcaaa
    76501 agtgagccac tctcggtaat ccattattta gaatttctat tttttaggat atctaaatac
    76561 tcttctgctt tatcagctgt tacacaacca cctgaataaa ctttgtctcc catattttgc
    76621 tgaatcgcca ttcttgaatg accaaacttc aaaatatcta atattatttt actgttttca
    76681 gtatttttct gatcactcag aatattgaaa atcccttgtt catatttaag gagtttttta
    76741 gctgtttttg aggctttacg ctcttcctgt ttcaagaact ctaaaaattt ttttggtgtt
    76801 gttcttttta ctttacgttc agaaagatca taatcaatca ctaatcgatt tccttttaag
    76861 tcccacttcc ctttatctcc tgttacataa gtaaatttaa tgggctcaaa attctcatca
    76921 gaaatatcac cgaaattcgt catttcgcca ttagctttaa attcagaaaa atctaaagtg
    76981 cttactttta gatcatcgta tttaatagcg catacccaag agcctacgat atcctgcttg
    77041 gaaagaatgg tttgttcaat ttttgttgaa tttgaacagg ctgataatac taaagtaaat
    77101 actgctaata aacctaactt tctcattttg ttttcctcaa atttttaaac tttttagaaa
    77161 ctacaagcga tcaaaaatag tcaaaatttt gcaaatttat atttggcagg cacacacagt
    77221 gtacccttac aataaaatta attttgctcc gacaacgccg ctaactgatc cgcttgatat
    77281 tcagtgataa tcggttgtat caattcatca attttgccgt tcatcacttc gtctaaacga
    77341 taaaccgtga ggttaatacg gtgatcagtc acacgccctt gcgggtagtt gtaggtgcgg
    77401 attttatccg aacggtcgcc tgagccaagt aagttacggc gggtatccgc ttgctctgcg
    77461 gcttggcgtt cttgctcaac ttgtacaatc cgagaggcta acactgccag cgctttggct
    77521 ttatttttgt gctgtgaacg ctcatcttga cactcgacca caatcccggt cgggatatga
    77581 gtaatccgca ctgcagagtc ggtggtatta acgtgctgac cgcctgcacc cgatgagcgg
    77641 taggtgtcaa ttcgcagatc agatggattg atttccggca tctcgctttc cggcaactcc
    77701 ggcattaccg ctaccgtgca agcagaggtg tgaatacgcc cttgtgattc ggttttcggt
    77761 acacgttgta cacggtgtcc gcccgattca aatttaagct gaccgtaaac gccttcgcct
    77821 gaaattttaa cgatgatctc tttatatccg ccttgttcac tctcatttgc cgacatttct
    77881 tcaattcgcc agcgtttact ttcgcaataa cggctgtaca tacggtataa atcaccggca
    77941 aaaataccag cctcgtcacc gcccgttccg gcacggattt caaggaaggc gttgtattca
    78001 tcattcggat ctttcggcaa taataaaatt tgtaaatgtt gctcaagatt ctcgatttcg
    78061 gctttatttt ccgcaatttc ttccgctgcc atatccttca tatcaggatc atcgagtaat
    78121 aattgagcct cttcaatatc attgttcagc tttttccagc ggttaaaggt gccaaccact
    78181 tcttctaatt gcgaatattc tttggaataa gcacggaatt tgtcttgatc ggaaataatt
    78241 gaggcatcgc caagtaacgc ctgtagttct tcgtggcgtt cacttaaact ttctaattta
    78301 ttgataatcg aatctttcat ttaaattatc tcttgcatat taagtaaggc gaaaaatttt
    78361 tcgcccctac agattttaaa agggtaaata actgacggat tatagcggat ttcacgctaa
    78421 aaatcttgtg taatctcaag ccaatttgcc aacatttgtt gaccaaattc agtgataaaa
    78481 gattccgggt gaaactgcac gccaaaaatc ggcaaatgtt ggtgtttaaa cgccattaac
    78541 acattttgat cgcaaactgc ggttggtaca agcggtgtat tttgcaacga attttgcaaa
    78601 atgccccaag agtgatacaa cccaactttc aactgcttag gcaaaccttt aaatatgggg
    78661 ttaggctcaa tttgagtgag cgtgcgttgc tgcccgtgtc taacatcgtt taggttatac
    78721 aacttgccgc caaaaaactc gcaaatcgtt tgatgcccca agcaaacgcc tagaattgat
    78781 ttggtttgat gataacgctc caacatcgca aaggtttgta gataggctct cggcacatca
    78841 gggccgggcg aaatcaaaat atggctaaaa tgctccacct cattgaggtc aagctcttca
    78901 accagcacca ctttcgccgg cacatcaagc ttacggagta aatccaccaa gttgaaggta
    78961 aaagagtcgt ggttgtcgat gattaatagt ttttttagca ttttattatt ttctttagta
    79021 tttcaaatca ccccatattt ttgtagggaa taaagagatt tgactattct tccaataatt
    79081 ctctcgatac catttccaat ttaatagtat ccacctcatt ttcaatcagc tcaacctgcg
    79141 gcacaatttg gcttgctttg cttgaaagat gttggaatcg ttccactttg cccagtaagc
    79201 cttgccgtcc cactaacgag gtaacggttt gattgtattg attatttgcg gtatttagcg
    79261 tgttacctaa tttagctaac cgatcggcaa ccgcacacac ttggttgtaa atttcgccgg
    79321 ctttttcgct gatttcacga gcctcgctgt tgcctcgttc aatccgccat aaattggcga
    79381 ccgtgcgtaa aatcggcatt aaggtggtgt gagaaaccaa aatcacattg cgttcatagc
    79441 caaagttaaa cagttgcgga tcgtgcttca tcgcttcaat ataagccggt tctatcggaa
    79501 taaacatcag tacaaaatcc gggcttttaa tgcctaataa tgcactgtag ttcttcttag
    79561 acaatccctc aatatgattg cgtagcgaac ggcaatgttc gtctaaggct tgagaaattg
    79621 caaaattttc ttctgatctg accgcttgat cgtacgctac taacgagact ttactgtcaa
    79681 taatcagatg tttttgatcc ggcaaatgca ccacaaaatc gggggcaaaa cgtcgcccct
    79741 cttcatcacg aaaactctct tgggcttggt aatgctcgcc tgcgagtaaa ccggcagatt
    79801 gtaaggcact ttcaagctgt acttcacccc agttgccggc aattttatta ttgcctttta
    79861 atgccgttgc cagattttgt gcctcttccg acattgaaac gccaatttgt agcacccgct
    79921 taatttcagc ctctaaattt gccgagcctt tgagcgactc actatgtacc tcattcaccc
    79981 gtttttgaaa gccttcaatt tgctctttga acggcttcag tagagcttct aacgagcttt
    80041 gattggtttc gctaaaacgc ttgctttttt cgtcaagaat ttgttgtgcc aaatgttgaa
    80101 attccacatt aagctgttgt tttacctcaa taaaattgcg ttgttgtgct tcaaaatttg
    80161 cctgtttttc cgaaagcgta gtacgcagtt cggtcagctc gttttgtacc tcgtttaaac
    80221 ggctaaataa cgcttgattt tcccgctctt tagttgagag tgaactttgg ctaaattgta
    80281 gctgttcttc caaactttct gcctttgctt gggaagaacc cacacgttct tttagctcat
    80341 taatatagcg ttccagctgg ttttcttgct gttcggcaag ttcgattttt tgttggaatc
    80401 gttgcaattg cccatctcgc tcgtttaaac gttcactcac tgcttcatat ttggtctgtt
    80461 gttgaattgc ccactgctca agctgatttt tttcttgagc caacacctca tatttttgct
    80521 gaatttgttc aaaattttcg gtgattttgc caagatcttg gcttaattcg taggcatttc
    80581 gctgataacg ggatttcaag aaaaagagat aaacgcctac cagcacacaa acggcaaggg
    80641 cgatgtagat cccaatttct tgaaaatgaa tggtgttgtt catcggtaaa acctttttta
    80701 aaaaatgctt ttcaaatcta ttgctttgca ttataacaga gcttttgatg attcagccaa
    80761 tttcagccat tgtgttttct atgcaagatt ttattcacca agccaatcac tacgggcaag
    80821 caaaacgccc ttttttcttt ttaattgatt ttgagcagca aaagccactt atttttccgc
    80881 tagaacaggc tcacgcaagc ggtctttttt ttgaattttt ttgcaaatcg aatctcgaaa
    80941 agccggttga aaaaccgact aaagcttttg aattatcggc aaatccgatt ccgtttagcg
    81001 aataccaaac cgggtttgaa ttagtgaaaa aggaaattca agccggcaat agctacttgc
    81061 tgaatttgag ctacccgact gccattgaaa ccaattattc attggcggaa atttttgccg
    81121 ccagcaaagc aaaatataaa tgttatttgc aaggcaggtt cgtctgtttt tcccctgaat
    81181 gctttgtgcg aattgaaaat aaccgcattt tttcctaccc gatgaaaggc acaattaatg
    81241 caaatgagga gaatgccgag cagaaattaa tggcttcgga aaaagagttt accgaacata
    81301 ataccattgt ggatttgatc cgaaatgact tggcgttggt ggcgaaaaat attgaagtta
    81361 ctaaataccg ttatgtggaa aaagtagaaa cccatcgagg ggcaattttg cagacaagtt
    81421 ccgagatctg tggcgaatta ggtgaaaatt ggcaagaaaa tatcggttcg atattggcaa
    81481 aattactacc tgccggctcc attagcggtg caccgaaaga gaaaacggtt tcgattattc
    81541 agcaagcaga attaggaaaa cggggttact acaccggtat ttttggttat tttgatggcg
    81601 agagcttaga aagtgcggtg gcaattcgtt acattgctca aacctcaaac gggcttgtgt
    81661 ttcatagtgg tggtggcatt acctcacaaa gtgtgttaac tgatgaatat aatgaactgt
    81721 tagagaaagt ctatgtgccg atttccgcta tttgaaaccc tttcgattat tgacggcaaa
    81781 gttcagaact tacagtatca tcaacaacgt tttgagcaag caacacaaga atattttggc
    81841 tgtgaacctc gttttagcct tgctgatatt ttagttgtgc cagaggcttc tcaacggggc
    81901 aaagtacgtt gccgaataga ttacaacgca acagaatttg agctgaaatt ttttatctat
    81961 tcgcccaaaa aagtagaacg ttttcgcttg gttgaggtgg aaaattggga ttatcacctc
    82021 aaatttagcg accgcaagcg gtttgatttg ctccctattt tacaaaatga agaggtgatt
    82081 attctcaata atggctacgt cagtgattgc tccatcggca atttactgtt cctaaaacaa
    82141 ggaatctggt atagcccgca acattatttg ctcaaaggca ctcagcttag taaattgctt
    82201 gatgaaggga aagtcgtttt agccaaaata gccaagcaag atttgcatca atatgaaaaa
    82261 attatgttga ttaatgctct taatcccttt gaggaaccaa gggcattgcc ttgctcgcaa
    82321 atttattttt gtgatcttga tcgaaaatcc taaaaaaatg cttgcaactg
//
LOCUS       DANLZQ010000002        66677 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.002, whole genome shotgun sequence.
ACCESSION   DANLZQ010000002 DANLZQ010000000
VERSION     DANLZQ010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 66677)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 66677)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..66677
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.002"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(157..987)
                     /gene="fghA"
                     /locus_tag="PXE50_000072"
     CDS             complement(157..987)
                     /gene="fghA"
                     /locus_tag="PXE50_000072"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014167586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HDL5621017.1"
                     /translation="MQQFENYRCFSGEQQVWQHFSASLNCEMKFAIYLPQSAKTQKLP
                     VLYWLSGLTCTEQNFITKSGFQRYADEHHLIVVAPDTSPRGVNVANDEAYDLGQGAGF
                     YLNATQGEWTTHYQMYDYIVSELPTLINAHFPTNGKQSIFGHSMGGHGALTIAFKNPG
                     QYQSVSAFAPIVAPTQVPWGQKAFLAYLGEDQTAWKAYDSVALLEKYRPSLPILIDQG
                     SQDSFLSDQLKPEIFCETADRLGIPYQFNLRDGYDHSYYFISSFIGEHIAFHAKHLKD
                     "
     gene            complement(1067..2125)
                     /locus_tag="PXE50_000073"
     CDS             complement(1067..2125)
                     /locus_tag="PXE50_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HDL5621018.1"
                     /translation="MAYPIKSYATFSATTPLAPHSFERRELLEDDVLIDILYCGVCHS
                     DLHMARNDWGWTQSYPLVPGHEIIGRIIKVGKNAKKFQIGDLVGVGCMVDSCRECSPC
                     QHGLEQYCEVGNIGTYGGIDRFDGTPTQGGYSTCVVVSEDFVLKVSENLDTKAVAPLL
                     CAGITTYSPLRHWNVKAGSKVAVVGLGGLGHMAVKLAKAMGAEVTLFTRSLGKADDAY
                     RLGASRVVLSTDEKQMADVANTFDLIIDTVPYTHDLKPYIPTLALDGTLVLVGLVGEL
                     EQTINTVPMILGRRSISASVIGGIQETQEMLDFCAEHNIVPDVEMIDMQNINDAYERM
                     LKSDVKYRFVIDMGSLKG"
     gene            complement(2312..3247)
                     /locus_tag="PXE50_000074"
     CDS             complement(2312..3247)
                     /locus_tag="PXE50_000074"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03571 family LLM class oxidoreductase"
                     /protein_id="HDL5621019.1"
                     /translation="MNTLSPIFSQVFGQNQLTLGLIAPFMGYQNHIPDNLTTIADNAR
                     LAENLGFSALWVRDVPFYDPHFGDVGQGLDPMVTLGFLSAHTQNIALGTAGLIAPLRS
                     PIHIAKMATSVDSLSHGRFLLGLSSGDRPVEYPAFGADFASRSERFRESIDLINTLTE
                     QDFPHFKGKHYADLTDNLDLLPKPKHRLPIVAIGRARQEMDWLANVPDAWIWHGVNPA
                     DTANIINTLADLRQKDTPTAFGYAQFVEVLDDKNAKAQLFNNIYLRGGAKGLADFWAK
                     EQEKGVKHLALNLKPTQRPADEVLTELAEYALTQF"
     gene            complement(3527..3838)
                     /locus_tag="PXE50_000075"
     CDS             complement(3527..3838)
                     /locus_tag="PXE50_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDL5621020.1"
                     /translation="MSETEKQAINAPNAVMNGYLTMHYPDWFKPDGIYFNDGAFESFE
                     SSHKLTKDGKIRLVPTAGHTLGHLAVVVDMGEHYILIGGDASYSEQDMLAGNIDGVCN
                     A"
     gene            complement(3845..4237)
                     /locus_tag="PXE50_000076"
     CDS             complement(3845..4237)
                     /locus_tag="PXE50_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDL5621021.1"
                     /translation="MIKVHCLTTGWVQIKIHHQVARFFARPARVLDVLTDKKWSPKLP
                     IGCWLIEHDDGLILVDTGESSRANDKGYQPWWHPFMQFCERRGVKKHEEVGEILKANG
                     FDPLRIDTVVMTHMHGDHAGGLPNFPNS"
     gene            4369..4929
                     /locus_tag="PXE50_000077"
     CDS             4369..4929
                     /locus_tag="PXE50_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HDL5621022.1"
                     /translation="MNDLRVIKTHLAIQNALIELLDEKLFEKVQVQEIIEKALINRTT
                     FYRYYSGESDLVGKLIKEVKAEYQDLLKKRFESGNLLRFMQTIGNRLLEKRRLILALW
                     QIKTPRHHLYDDMHMLLKNAFIAHAKRITSDDKNWAEKNWDYQAHIFATIALESHKYY
                     FEQGKLLPIPQVFEEWIEMVQVLKSV"
     gene            complement(4995..5984)
                     /locus_tag="PXE50_000078"
     CDS             complement(4995..5984)
                     /locus_tag="PXE50_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012073273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HDL5621023.1"
                     /translation="MSKQIQFTKTGSPDVLQIVDVAIPAPKAHEVQIQIQAIGLNRAE
                     MMYREGAYVIDPVFPATLGYEGAGVIVAIGEGVNEVAISDKVSIIPSFMFTEYGTYGE
                     IVNMPKHAVVKHPDNLSMEQASASWMAFVTAYGGLIEFGKVQKGDFVVLGGATSSVGL
                     ASIQIAKMQGATVIALSRTHAKGDVLLEKGADFVIATSEDDVTAKLFEITNGKGVNVV
                     FDPVGRKEAAKIINAMAQDGRYIIYGALSHDDIAVPVFPILGKHLTVRGYELFEITTV
                     PEKLAQAKTFVYDGLASGQLRPEIDKIFAFDEMVKAHEYMASNQQIGKIVVKV"
     gene            complement(6198..7115)
                     /locus_tag="PXE50_000079"
     CDS             complement(6198..7115)
                     /locus_tag="PXE50_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL5621024.1"
                     /translation="MTFIIGILAGVLIAFQSAINARLRMHVGAAFLTSFVSFSVGLLF
                     LLGLSLIMQQTPAFSLDNLGNVPLWAWTGGLLGMVGLTANVLIFPKLGGVQTAVMPIL
                     GQVLMGVLIDTFAWLNSPYIAFTASRLFGIGLVLFGVWIAVVLPHLSGLKRKENANLW
                     LWRAVGILGGTALATQAAVNGEFGRQPGSSLGAATVSFGVGAIGLLLVVLFYEKSLPK
                     LCQPTEGKPFWIWSGGILGSLFILAGVWLVPQIGTGSVVMLVLSGLICGSLLVDKFGL
                     FGITQKPILPLQIIGVTLLLAGVAFIRLL"
     gene            complement(7251..7910)
                     /locus_tag="PXE50_000080"
     CDS             complement(7251..7910)
                     /locus_tag="PXE50_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003672168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDL5621025.1"
                     /translation="MQFFNKEDVINAFHYRASTRSYDGSRKIPAEDFNYILELGRLSP
                     SSVGSEPWQFLVLQNPELRQKIKPYCWGIPTMETSSHIVVILAKKNARYDSQYFSEIM
                     DRRGLQGEAREKAMAVYKKFQEKDIGILDSERSLFDWASKQTYIALGNMMTGAALIGV
                     DSCPIEGFAYQEVNDILAAEGLFDPSEWGVSVMCTFGYRDKEIRQKARKDFETVVKFI
                     E"
     gene            complement(8095..9159)
                     /locus_tag="PXE50_000081"
     CDS             complement(8095..9159)
                     /locus_tag="PXE50_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase/NADH oxidase"
                     /protein_id="HDL5621026.1"
                     /translation="MAKFRKLFTPFNIKNLALKNRVVMPPMCQYSATNGVPNDWHFVH
                     YTSRAVGGVGLIIVEMTNVAPNGRITPNCLGLWNDEQQQAFKKLVDSVHAQGAKIGVQ
                     IAHAGRKAQDEPDAVAPSAIHYGELDYAGQNLITPRELTTDEVKALVQAFKDSVKRAV
                     EAGFDTIEIHGAHGYLIHQFYSPKSNQRSDEYGQDKMLFGEQVIQAAREVMPSEMPLI
                     VRISAQEYGENGFGLDYGLQVAKRFADAGADVLDISGGGDGVLHAGNHPEFYAGYQVD
                     FARQVKLATGKPVIAVGMLDNPAVGDHILGMGDADLVAVGRALLRDPYWVLNAQYDQN
                     AADSSEMQFVPKQYERGLFM"
     gene            9250..10158
                     /locus_tag="PXE50_000082"
     CDS             9250..10158
                     /locus_tag="PXE50_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL5621027.1"
                     /translation="MSDIRTLDFNLLKAFVVLLDECNVSRAAQRLSITQPAMSGILNR
                     LRESFNDPLFVRVQHGMQPTDRALQLGQTARNILQDISSMLQPPILEPEHLNMTLRIA
                     AMDYVQQIIALPLILRLRRLAPNVKVALLPVQGQNIKTLFEQKKIDLALVSRQHLSTD
                     TLKTVLYEERYVCAMSKTHPMAQTPLSLDQFCNLPFAMLSYNGGEFSGATDLALQKIG
                     LQRKVMVSVNHISLLPQLLQGSDLVAVLPERLAKTLPNVYLQPPPIEVEGFTMMMAWH
                     ERTEQDTAHRWLREVLQGVVKPKQAL"
     gene            complement(10228..10779)
                     /locus_tag="PXE50_000083"
     CDS             complement(10228..10779)
                     /locus_tag="PXE50_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDL5621028.1"
                     /translation="MAKQIAVLIGSGSKTSFSHLTVRHLQKMAPASIQLNIVDIADLP
                     LYDRDLDENSPAQYTRVREAVAVADGVLLVTPEHNASFSAMLKNAIDVVSRPMGQSKW
                     IGKPAGIVTVGASPAGGVRAADQVRTITSGSFVNMPTLPFALNVGNLFTGVFDEQGEI
                     ASETLKSSMQNFINAYAQFVEKY"
     gene            10971..12332
                     /locus_tag="PXE50_000084"
     CDS             10971..12332
                     /locus_tag="PXE50_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HDL5621029.1"
                     /translation="MLFLNKIKQLFIFAFTLVLSACSLVVYKPVETIKQVNVERGYRQ
                     KNVIAESAKDGNIVVIMFSGGGTRAAALGYGVLEEFKKVRVKETNKGNTLLENIDIAF
                     GVSGGSILATYFALEGKDIIPKFADRFLKANFQKDIITEVFSLSNLPRLSSPQYGRGD
                     LLQERLNFALYHGKKFGDLVKNRKGPFAVISATDMNIGQKLTFTQETFDGLCLNLNDL
                     EISRAVAASSSVPLIFAPLTLNNNGGNCHFSMPQEFSAREKAIDGLITKNIEETNHIL
                     SLYQDSKERPFIHLVDGGLTDNLGLASVLEISDVMGIEEMYQYIHQLRVKNIVVINVN
                     AQNEVSSEIDKTANVPGVADVVNTIVNVPIDRTTQINLQRYRQFTDGWNEYANKQPSK
                     IEMHFVSLGLKELPDGDLKKDVLNIATSFYLPEEDVDKLREAARVLLQQSQEYNAALK
                     TLQ"
     gene            complement(12380..12877)
                     /gene="rraA"
                     /locus_tag="PXE50_000085"
     CDS             complement(12380..12877)
                     /gene="rraA"
                     /locus_tag="PXE50_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E activity regulator RraA"
                     /protein_id="HDL5621030.1"
                     /translation="MRIDTSALCDLYSDQVDVVEPIFSSFGGASSFFGKITTVKCFES
                     NGLIAEVLEEEGEGRVLLVDGGGAVRRALIDAELAQLAVDNGWEGIIVYGAVRQLDIL
                     ERLDIGIHALAPIPVGADNTDIGEVDTPVNFGGVTFFPEDYVYADLTGIILSQELLDL
                     NDISE"
     gene            complement(12975..13877)
                     /locus_tag="PXE50_000086"
     CDS             complement(12975..13877)
                     /locus_tag="PXE50_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel"
                     /protein_id="HDL5621031.1"
                     /translation="MTEKVTETAPNIDVVAETEKVIHKVSNMNIETMLNEWIIPYGTK
                     ILLAIAIFVVGKFLARLISRLLGKAALKSTKDEMLQSFIVSISYFLLLLIVVIASLSQ
                     IGINTSSLVALIGAAGLAIGLSLQNSLQNFAAGVMLLIFKPFRKGDLIETGGMTGVVE
                     QMGLLVLELRTGDNKTVLLPNGKVFSDSIINYSNNPTRRIDFTFDISYESNLKEAKEI
                     IQRILDANTYVLKDPAPVVAVGALAPHSVQLVVRPWVQTPNYWAAYWEIIEQVKLAFG
                     EAGISIPYNQMELHIKSGSLENKA"
     gene            13986..14948
                     /gene="rluC"
                     /locus_tag="PXE50_000087"
     CDS             13986..14948
                     /gene="rluC"
                     /locus_tag="PXE50_000087"
                     /EC_number="5.4.99.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(955/2504/2580) synthase
                     RluC"
                     /protein_id="HDL5621032.1"
                     /translation="MTTEKVISAGVQFFTISEDEAGQRLDNFLLAKLKGVPKSLIYRI
                     VRKGEVRVNKGRNKPEYKLQPDDLVRVPPVRVAEKNEAPISTKLNKVAELESQILYED
                     ESMLVINKPSGIAVHGGSGLSFGVIEALRALRPQARFLELVHRIDRDTSGILLVAKKR
                     SALRSLHEQLREKVVQKDYLALVRGQWQAHTKVIKAPLLKNELASGERIVRVSEEGKP
                     SETRFSIEERYANATLVKASPITGRTHQIRVHTQYAGHPIALDDKYGDAEFDSKMKEV
                     GLQRLFLHAHAIRFEHPKTGEEMVITAPLDKTLKGVLAKLRANY"
     gene            15057..15914
                     /gene="folP"
                     /locus_tag="PXE50_000088"
     CDS             15057..15914
                     /gene="folP"
                     /locus_tag="PXE50_000088"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HDL5621033.1"
                     /translation="MQIHFKNFQKNDRLLDLTTPQIMGILNFTPDSFSDSGKFFSLDK
                     ALFQAEKMLADGASIIDIGGESTRPNAAIVSLEQELERVVPVVEAIRSRFDCLISVDS
                     SKAEVFKESAKVGMDIINDIRALTEPNALAAAVELGLPVCLMHMQGNPQTMQQNPHYD
                     DVLEDVADFLNQRIFECITAGIPKEHIILDPGFGFGKSVKHNYQLLKHLKAFVDSGFP
                     VLAGLSRKSMIGAVLDKPVEQRLLGSVVGALLAAQNGAKILRVHDVAETADALKIWQA
                     MLESDNEEK"
     gene            15914..16261
                     /locus_tag="PXE50_000089"
     CDS             15914..16261
                     /locus_tag="PXE50_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC family reductase"
                     /protein_id="HDL5621034.1"
                     /translation="MTTLVYGIKNCDTVKKALKWLEDHNQNPQLHDYRVDGLNADWLV
                     EMEAKFGWENLVNKRSTTWRNLDEEIKNNLNRESALKVLTEQPTLIKRPIVIKEDIAL
                     IGFNEKEYVAAFN"
     gene            16391..17539
                     /gene="dapE"
                     /locus_tag="PXE50_000090"
     CDS             16391..17539
                     /gene="dapE"
                     /locus_tag="PXE50_000090"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HDL5621035.1"
                     /translation="MKNEIISLAQNLIRRDSISPQDKGCQQEIAQRLEKLGFNIEWLP
                     FGDTLNLWATHGSENGKTEPCIVFAGHTDVVPVGDESQWAYPPFSAEIVDGMLYGRGA
                     ADMKGSLSALVVAAETFVQHHPNHKGKVALLITSDEEAAAKDGTVKVVETLMARNEAV
                     HYAVVGEPSSSKVFGDVIKNGRRGSITADLYIEGIQGHVAYPHLAENPVHTSLGFLTE
                     LTTYQWDNGNEFFPPTSLQIANIKAGTGSNNVIPGELYVQFNLRYCTEVTDEIIKAKV
                     AEMLEKHGLKYRISWNLSGKPFLAGNGKLVEAALQAVENVTKITPRLDTGGGTSDGRF
                     IALMGAEVVEFGPLNATIHKVNECVSADDLAHCGEIYYQILEKLLATA"
     gene            17650..18984
                     /locus_tag="PXE50_000091"
     CDS             17650..18984
                     /locus_tag="PXE50_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HDL5621036.1"
                     /translation="MQLYSYICLLFGLAMFISFFTRKLNENIQTTIAITASALVGSLL
                     ILTFGSLGWFNVDKLAISIFEQLDFKSFLLNGMLGFLLFAGSLGIKLPLMKEQRREIA
                     VYALFSTLVSTFLIGALIYGVARLLGLELGFVYCLLFGSLISPTDPIAVLAIIKSLKA
                     PKRLSMHVEGESLFNDGIGLVIFTTIFAVAFGGQEPNLSGITGLFLQEAVGGIVFGLL
                     TGFVAHKFISATDDGSLEILITLTIPTVGFVIANYLHVSGALTMVVAGIMIGNWTRRS
                     GFSEQSQKYLDHFWEMIDHSLNYLLFLLIGLSTLLVDFTFIGGVLMLAAIPICLLARY
                     ISLWIPYQVLKRFRTYNPYTLKIMTWGGLRGGLALAMALSVPAGAAVVSSSEGNLDVR
                     DLILLMTYAVVTFSILVQGSTVEPMIKKSKLVDPRKVALNKLGAPDDVIPHI"
     gene            19091..19600
                     /locus_tag="PXE50_000092"
     CDS             19091..19600
                     /locus_tag="PXE50_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HDL5621037.1"
                     /translation="MLFTGLLCGFLLGFVMQRGRFCITGAFRDLYVTKNSRMFVALLI
                     AITVQSIGIWLLYEAGSFSSPAEDLPLLAVIIGAFLFGIGIIYAGGCATGTWYRAGEG
                     LIGSWVALVIYGLFSASMRTGVLAPLNQELKSNVIQHRTIYETFGISPWVLVFILSVI
                     TLALSAHSI"
     gene            19629..19850
                     /locus_tag="PXE50_000093"
     CDS             19629..19850
                     /locus_tag="PXE50_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HDL5621038.1"
                     /translation="MNVRLPASGLVCPFPLVEAKAAMAKLNKGDSLTIEFDCTQATEA
                     IPNWAEEEGYEVTDYQQLGDALWEITVVK"
     gene            complement(19915..21423)
                     /locus_tag="PXE50_000094"
     CDS             complement(19915..21423)
                     /locus_tag="PXE50_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HDL5621039.1"
                     /translation="MSKCPVTHLTMNNGAPVVDNQNSLTAGPRGPLLAQDLWLNEKLA
                     NFVREVIPERRMHAKGSGAFGTFTVTNDITKYTRAAIFSQVGKKTEMFARFTTVAGER
                     GAADAERDIRGFALKFYTEEGNWDMVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNMRS
                     ATNNWDFWTLLPEAFHQVTIVMSERGIPASYRHMHGYGSHTYSFINAANERFWVKFHF
                     HTQQGIKNLTNEEAAAIIANDRESHQRDLYEAIERGDFPKWKMFVQIMPETDADKVPY
                     HPFDLTKVWPKSDYPLIEVGEFELNRNPENFFADVEQSAFAPSNLVPGISVSPDRMLQ
                     ARLFNYADAQRYRLGVNHHQIPVNAPRCPVHSNARDGQGRVDGNYGSTIHYEPNSFGK
                     WQEQAQYAEPPLKINGDAAHWNYREDDADYFSQPRVLFNMMNDEQKQALFNNTAAGMG
                     DALDFIKYRHIRNCYACDPAYGEGVAKALGMTVEDAIAARATDPALGQPGLL"
     gene            complement(21711..22850)
                     /gene="dnaJ"
                     /locus_tag="PXE50_000095"
     CDS             complement(21711..22850)
                     /gene="dnaJ"
                     /locus_tag="PXE50_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015939959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HDL5621040.1"
                     /translation="MAKKDYYEVLGLSKGASEKDIKRAYKRLAAKHHPDKNQGSKESE
                     EKFKEITEAYDVLTDSEKKAMYDQYGHAAFEQGGAGAGGFGGFGGGGFGGFEDIFSEM
                     FGGGFGGGGRRQRVVRGDDLRYDIEITLEEAVKGCKKDIRIQTLAECDTCHGTGAEAG
                     SKVETCSHCHGSGRVRRQQGFFVTEAVCPSCHGTGKRIEKPCRSCHGDGRVQKAKNLS
                     VTIPAGVDTGNQLRLSREGAAGENGAPAGDLYVVIHVKEHDIFERDGSNLYCEVPISF
                     TLAALGGEIEVPTLDGKLKLKIPAETQTGKLFRVRGKGVTSPRGGYAGDLICKVVVET
                     PVNLTEEQKALLRQFEESLEGQGKHRPKHEGFFDGVKKFFDNLGK"
     gene            complement(23073..23375)
                     /locus_tag="PXE50_000096"
     CDS             complement(23073..23375)
                     /locus_tag="PXE50_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621041.1"
                     /translation="MLKLYPTTENVQPPFYKIYDHKSGETVIATETENSNTAILMDDF
                     VWFEQIPTTEALLADTWSVIENRSKQGLLKRAYTKDFEKHLADGKVEIYIAVNPHC"
     gene            complement(23517..25415)
                     /gene="dnaK"
                     /locus_tag="PXE50_000097"
     CDS             complement(23517..25415)
                     /gene="dnaK"
                     /locus_tag="PXE50_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005670448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HDL5621042.1"
                     /translation="MGKIIGIDLGTTNSCVAVMDGDKPRVIENAEGARTTPSIIAYTD
                     KETLVGQPAKRQAITNPKNTLFAIKRLIGRRFTDAEVQRDIEIMPFEISKADNGDAWV
                     TVKGDKLAPPQISAEILKKMKKTAEDFLGEPVTEAVITVPAYFNDAQRQATKDAGRIA
                     GLDVKRIINEPTAAALAYGLDSKKENQTIAVYDLGGGTFDISIIEIDNFDGEQTFEVR
                     ATNGDTHLGGEDFDNRVINYLVEEFQKEQGVDLRNDPMAMQRVKEAAEKAKIELSSAQ
                     ETEVNLPYITADATGPKHLNIKVTRAKLESLVEDLVNRSLEPLKTALADAGLSVGDIN
                     DVILVGGQTRMPLVQKKVADFFGKEPRKDVNPDEAVAIGAAVQGGVLSGSVTDVLLLD
                     VTPLSLGIETMGGVMTTLIEKNTTIPTKKSQVFSTAEDNQSAVTIHVLQGERKRAADN
                     KSLGQFNLEGINPAPRGMPQIEVTFDIDANGIINVSAKDKNTGKEQQIKIQASSGLSD
                     AEVEQMVRDAEANAEADKKFEELVQARNQADGIAHATRKQITEAGDALNADDKAKIEA
                     AISELETAAKGEDKAEIEAKIEALIKASEPLMQAAQAKAQGGEQPQQSQKDDGVVDAE
                     FEEVKDNK"
     gene            25674..26012
                     /locus_tag="PXE50_000098"
     CDS             25674..26012
                     /locus_tag="PXE50_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL5621043.1"
                     /translation="MKLITTIIQPSKLDQVQDALSEIGIQGMTITEVKGFGRQYGHTE
                     QELSQMSRIDFRPKIKVEILVSNYQTDEVIDAILNASYSGQVGDGKIYVANIEQVIRT
                     RTGETDDEAV"
     gene            26183..26926
                     /locus_tag="PXE50_000099"
     CDS             26183..26926
                     /locus_tag="PXE50_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621044.1"
                     /translation="MLNKHINKIINSSFSLAFFTLTSFATAYCYGWGQAIFHGYPWWH
                     VEIGNASMARSLAYVFGTSVILFLCYALGYSLLNKVFQLHYFRNLGWLRVIVLVSVFT
                     VPVILTFYLFTGIVPIYISFIYIFVSGVSVFFFRKRWNNTKFDLDFRKMLLGGSFALF
                     NIFIFLYFSLLSLHIGYLRAGLRTTYDYIEIENQKYYILSTNSDNGYIMGTKIRGNQS
                     FLFFNRDTHQYYHVHIEQCTDSRLCKVIV"
     gene            27642..33713
                     /locus_tag="PXE50_000100"
     CDS             27642..33713
                     /locus_tag="PXE50_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA-like family protein"
                     /protein_id="HDL5621045.1"
                     /translation="MNKIFKVIFNQTTQKMEVVSELARSQGKAASSTDKRGTIKLAAA
                     SILGGATLISGMAAFMLSATPAEAAVIIDRIEVQQKAPKKVVNGGIDIYTNTSLATDS
                     ITNPYNYFNPGSLSYADRTKLQESNNSVNKEKDSRLLYKSNTTSAIVIGHNAVALDNN
                     RKSRGKPKASGIAIGDYSYSGGGLSIAIGSFSRTASIGSVALGTSARAEGFNSFAAMR
                     QSAAIADYSTAIGSTSWANATASFAIGASATALGDRSFAIGSGTPQTVDGSYGHENRR
                     SIYDGQNNTLAFGTDAFSIGTKAKTNGNHSFAIGTNAWSGGFKLENSNISELGQVINP
                     DTAKVANNAFALGTNTRANSNDTLAFSTNASATGDGSIAFGVNSNTTGIGAIAFGNAS
                     KAWKSNAISIGWNANSHAEKVISIGSHSNASKDGAMAIGDTANSSGNNSVAIGYSANV
                     SKANATAVGTRANITHEGGTAIGFEAKSKGNYATAIAYNSTAKGKNSIAAGVNSTVSG
                     IRAAALGYNNTVSGKDTFVLGSNVTVKTKGSVILGSDSTEATATKEDTATVGTLKYSS
                     FAGDENVVDGDYVSVGNATNARQIKFVAPGKIASNSTDAINGSQLYAVADTLVKTGFN
                     ITADHSGLGGGAKEDNVKLGETVKYTSTDKNVVTTVTNNTIDFGLSDNISVGGKPGKD
                     GSVGVKGADGKDGVTIKPEAIVFHGVDGVNGKDGKDGKASIKVEKGAKGLDGNDGKDG
                     ESKTRIVYEKPNGDKEEVATLNDGLKFGANDGKVHDAKLNTQVDIKGATTNTDWAKFD
                     AGKNIMTQVVGNTITVALAKDLAGLDSATFGTQGDSTVINKDGVTIAKKDPNDATKSN
                     VTLTEDGLSNGGNQITNVDSGLKGKDGQPVKLTEAAGDVLNNAVNVGDLKNTVTETVT
                     EVTTDAFGLKDENNKEFKQNLGTTAKIIGDGNVKTNVVEKDGGHALEVSLVNNITVGK
                     DGEPGKVGIAGKDGKDAIALDGKDGAITVGRPGKDGIDGTIGVNGKDGSAVVLNGKDG
                     SIGLNGTNGKDGLTIKGTEGKPGLVGKDGLPGKDGVTRIQYQPTDGNGDPIGEPEQVA
                     TLNDGLHFKGDDATLVSKKLNETLEIIGGADKDKLTANNIGVNSKDGKLSVQLAKDLK
                     DLNSATFKPQDGENGQEGKGPTTVVNNNGVTITPKDGTDGKAVKLTEDGLDNGGNQIV
                     NVKSGIDGLAGKDGINGKDGKPITSVNDLTDDQLKEVGTNAANINDVVNASNDIIEKG
                     FSIAADNGETDHVKLGETVKYTSKDKNIITTVSDNVIDFTLNNDFTIGGPGKDGSIGV
                     KGADGTVGVTLNGKDGSIGLTGPKGADGKDGASATISVKDGAKGLDGNDGKDGESKTR
                     IVYEKPDGTTEEVATLNDGLRFVGDDGKEIVKKLNETLKISGGDTDLTNLSDNNIGVV
                     NNNGALTVKLAKDIDLTKDGSVTIGDTTVNNDGLTIKDGPSVTKAGINAGDKKIINVQ
                     DGEISATSKDAVNGSQLYQVQEVANAGWNLTANGKDKGNVKPGATVDLNNKDGNIIIT
                     KEGNNVTFGLKNNLTIGGKDGKDGQIGIAGKDGKDGVTIKGDGTITAGRDGKDGVDGS
                     IGATGKDGASVVLNGKDGSIGLTGPKGADGKDGASANIAVKDGAEGVDGTNGKDGLPG
                     ENGKTRIVYETKDKDGKTVTEQVATLNDGLIFSGNNEDVKNRQKLNTEVKVKGEGVDK
                     TASENFKSASGNINVKANGTDTLEVQLAKAIDLTEDGSVTTGDTTVNNNGLTIKDGPS
                     VTKGGIDAKGTKITNVKDGDVTATSKDVVSGSQLYNAMQNTGWYLTVDGNVAETSEKG
                     AQRVNNNGKVAVSGGKNIVVSRKGSTVEVATSSNLEFDSVKVGGTTISSTVAKDGVNE
                     LNIAGSKNAQTHITNVAPGVKGTDAVNVNQLKGAENRLNNRISNVDKDLRAGIAGALA
                     AGNLYHVTQPGKSMVSAGVGAYRGQGAIAVGYSRLSDNGKVGIKFSVNSNSRGDTGAA
                     ASVGYQW"
     gene            complement(33935..35320)
                     /gene="hflX"
                     /locus_tag="PXE50_000101"
     CDS             complement(33935..35320)
                     /gene="hflX"
                     /locus_tag="PXE50_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HDL5621046.1"
                     /translation="MLNESLPNSEENSAFGFALSEASQTTEAASPTDPENQDKAILVH
                     LYLGQHKDVENLLEFKTLAESAGVEVLATLTTSRQSSHIKYYVGQGKAEGIAEAVERL
                     GATVVLVNHQLSPAQTRNLQSLCGCRVVDRTGLILDIFAQRARSHEGKLQVELAQLRH
                     LSTRLVRRVTNQDQQKGGAVGLRGPGETQLETDRRLIKVRIQQLLNRLEKVSKQRNQN
                     RKTRQKADIPTVSLVGYTNAGKSTLFNAITQAGVYAADQLFATLDPTLRRIQVQDVGT
                     TILADTVGFIRFLPHDLVSAFKSTLQETTEATLLLHVIDGSDERKNENIDAVNQVLDE
                     IGALDIPTLLVFNKIDKLEGVEPHIERNADGTPVAVYLSAQENSGIELLFQAIQERLR
                     SNLVCENLLLPVTAGAIYAQFKAENCIKTEHFNEFGERIISIEINEVQWNKWVKQFPD
                     LAEYIELAKWG"
     gene            complement(35340..35612)
                     /gene="hfq"
                     /locus_tag="PXE50_000102"
     CDS             complement(35340..35612)
                     /gene="hfq"
                     /locus_tag="PXE50_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005712219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HDL5621047.1"
                     /translation="MAKGQSLQDPYLNALRRERIPVSIYLVNGIKLQGQIESFDQFVI
                     LLKNTVSQMVYKHAISTVVPARALSHNNNNQAQHAQPAAEVTEQAE"
     gene            complement(35681..36634)
                     /gene="miaA"
                     /locus_tag="PXE50_000103"
     CDS             complement(35681..36634)
                     /gene="miaA"
                     /locus_tag="PXE50_000103"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HDL5621048.1"
                     /translation="MNKKPLALFLMGPTASGKTDLAIALRQELPVEVISVDSALIYKG
                     MDIGTAKPSKEELALAPHRLIDILDPAESYSAMNFHADALREMADITSQGKIPLLVGG
                     TMLYYKALLEGLSPLPSADPAIRAEIESRAAQHGWATLHQELVKIDPIAGARINPNDS
                     QRINRALEVFYITGKTMTELTAQQGEALPYNILQFAIAPQDRAVLHQRIEQRFHKMIE
                     LGFEEEVKRLFLRKDLHINLPSIRCVGYRQMWEYLQGDISLDEAIFKGICATRQLAKR
                     QITWLRGWQGELTWLDSLAPTSSKAKMVEKIDHYLKNCDNI"
     gene            37074..37340
                     /locus_tag="PXE50_000104"
     CDS             37074..37340
                     /locus_tag="PXE50_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelB/DinJ family
                     antitoxin"
                     /protein_id="HDL5621049.1"
                     /translation="MANSALVSVRISPEIKEQASEVLAGIGLTVSDVMRMTLAKIATE
                     KRFQFDYQPNFETAEVLRAVKNGEEKLHSANSIADLMEQLNARD"
     gene            37327..37596
                     /locus_tag="PXE50_000105"
     CDS             37327..37596
                     /locus_tag="PXE50_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system mRNA interferase
                     toxin, RelE/StbE family"
                     /protein_id="HDL5621050.1"
                     /translation="MREIEYSNAFKRDYKKCAVESLSSSLIEALYFLINDKPLPEKYC
                     DHALTGEWKGFRDCHIQPDLVLIYRKVEDDKLELLRIGSHSHLFG"
     gene            complement(37615..39498)
                     /gene="mutL"
                     /locus_tag="PXE50_000106"
     CDS             complement(37615..39498)
                     /gene="mutL"
                     /locus_tag="PXE50_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HDL5621051.1"
                     /translation="MINTTPKQLIHILPPQLANQIAAGEVVERPASVVKELVENSLDA
                     GANTIQIDIEKGGSQLIRIRDNGCGISKQDLPLALARHATSKISSLEDLEAILSLGFR
                     GEALASISSVSRLTLTSRTAEQTEAWQAYAQGREMAVEIQPASHPIGTTIEVANLFFN
                     TPARRKFLRTDKTEFAHIDEVVRRIALAKPNISFSLSHNGKIVRQYRKVQDNSVEQQQ
                     KRVAAICGDEFIQHSTYIDRQHGDLHLHGWVGSPALARLQNDLCYSYVNGRMMRDKTI
                     NHAIRQAYGDSIASGYYPAFVIFLDLDPTMVDVNVHPAKHEVRFHQGRLVHDFILQGV
                     LNSLQQTQPTLELRNEVNEPLPSYVQDTNRQAAGQNIFVSQTAPQAAEFTQKNASRSS
                     YTPKFERSNSVSSSAQKWYKELVGGDLHQTTPTIKTQSTLVEPKTEPQTEHKTEAVSQ
                     KITQIAPLASHHSQALAIVKNQAVLIKEEENFYLLPLATLAELKLKLQLEKGQSQALL
                     IPLNLSLDQQQTERWQQTKEELTKLGFSISEKQWQAQTRLTVLSVPQAVREQNLQQLL
                     FALFNQTQAVNLAEFFAKKCEKPTACTLSDVIALLSEIELYANGKKELEGIRKEVDFS
                     KFL"
     gene            39782..41020
                     /gene="proA"
                     /locus_tag="PXE50_000107"
     CDS             39782..41020
                     /gene="proA"
                     /locus_tag="PXE50_000107"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HDL5621052.1"
                     /translation="MQMIELAQQAKQASFELAQFGNLQKNQALLTIADSLEQRAEEIL
                     YANAKDIEFAQAQGISLAIIDRLLLNEDRLKDIANDVRNVAKLADPVGQVMDGGVLDS
                     GLKIERQRVPLGVILTIYEARPNVTIDVASLCLKTGNAVILRGGKETKFTNAVLVDVV
                     QDALEKAGLPKLAVQAVTDPDRALLLELLKLDRYIDMVIPRGGAGLHQFCKENSTIPV
                     IVGGIGVCHLFVEKTADQEKSLEVIANAKTQRPSTCNTLETLLVEKAIAVEFLPKLVA
                     KMQQLGVTIHSNDLQKIEGIEPLDQAKLSQEWLSLDLNVVVVNDLQQAVEHIRHYGSQ
                     HSEGILTSDYQLARQFVQQVDAAAVYINASTRFTDGGEFGLGAEVAVSTQKLHARGPM
                     GLEALTTYKWVCEGDYLVRG"
     gene            41022..41867
                     /locus_tag="PXE50_000108"
     CDS             41022..41867
                     /locus_tag="PXE50_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor BrkB family protein"
                     /protein_id="HDL5621053.1"
                     /translation="MLNRLWRFIKLFAKRYNENNIAISAGYLTYSTMLAIVPFIVVLF
                     SIFTFFPIFHEANEQLKAFIYDNFAPSASEMVSEYIELFVSNAKQMGLVSFIGLFVVT
                     IMLIKSIDEALNTIWHDNRQRPMWFSFLLYFLILLFGPLLAGASIAISTYVMSLSIFN
                     GNGALSLGQHLLELMPFLLIWLLFTLVYKFIPIRKVKFQHAAIGALMAAIFFTLGKKA
                     FIWYITAFPSYQAIYGALAVLPIMLLWIQLSWQVVLLGGQFAAVLDEMETDKGSINDR
                     LNSAG"
     gene            41842..42276
                     /gene="dtd"
                     /locus_tag="PXE50_000109"
     CDS             41842..42276
                     /gene="dtd"
                     /locus_tag="PXE50_000109"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HDL5621054.1"
                     /translation="MIGLIQRVKFAKVEVEGQVVGEIASGLLVLLGVEKDDDEAKADK
                     LLEKVLNYRVFSDSEGKMNLNVQQAGGSLLVVSQFTLAADTNKGLRPSFSKGASPVDA
                     ERLYAYFHQQAATKIHTQTGQFAADMQVSLQNDGPVTFWLQV"
     gene            complement(42359..43183)
                     /gene="mutM"
                     /locus_tag="PXE50_000110"
     CDS             complement(42359..43183)
                     /gene="mutM"
                     /locus_tag="PXE50_000110"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HDL5621055.1"
                     /translation="MPELPEVETSVRGVSPYLVGQTIEQIIVRQPKLRWTVSPELSQM
                     AGAKITAVERRAKYLIIRTDKGDILVHLGMSGSLGILQERQQKEIGKHDHVDLITQNG
                     TILRYNDPRKFGCWLWAEKAEDHELLRKLGPEPLSNDFTADYLFAKSRKKTTACKTFI
                     MTNEVVVGVGNIYACESLFMAGIHPELAAQNLTKKQCERLVKTIKEVLTKAIIQGGTT
                     LKDFIQPDGKPGYFAQVLQVYGRKGETCNDCGKPIETKVIGQRNTYFCPKCQRLPK"
     gene            complement(43229..44527)
                     /gene="brnQ"
                     /locus_tag="PXE50_000111"
     CDS             complement(43229..44527)
                     /gene="brnQ"
                     /locus_tag="PXE50_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transport system II
                     carrier protein"
                     /protein_id="HDL5621056.1"
                     /translation="MTRNTLVVGFLLFAIFFGAGNLIFPPKLGYESSTEFFSAISGFV
                     LTGVGLPLLGIIVSAFYNGGYKSALDKIHPWFSLAFLTSIYLAIGPFFAGPRTAATAY
                     EMAIMPFLGDSSQVSMLIFTLIYFAFTLWLALNPNKMVDRIGAILTPILLITIIGLVI
                     RAGFILDTDPQITTPNTNEQSYFFKGMVDGYLTMDALASLAYSVIVLNAIRGKGVSQA
                     ALQRQTVSAGLVAAVALAVIYISLGWIGNNMPISANTLSMLSERKLDLGTYILNTVTT
                     QAFGELGRSVLGVIVSLACLTTAVGLAVSVSEYFNEIFPKISYKVYAILFTVISFTVA
                     NQGLKEVISKSIPVLLVLYPIAMTVILMLLINLVIKLPLSAQRLSLLLVTIVAIASVA
                     GVGFTENLPLKSYSMEWLPFAIIGAIIGAIIHPLTGRKHK"
     gene            complement(44646..45368)
                     /gene="fabG"
                     /locus_tag="PXE50_000112"
     CDS             complement(44646..45368)
                     /gene="fabG"
                     /locus_tag="PXE50_000112"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HDL5621057.1"
                     /translation="MSKIALVTGATRGIGKAIAEELVAKGYIVVGTATSEKGAESISA
                     YLGENGKGLVLNVADAESIESVLKQIKETFGDVDVLVNNAGITRDGLLMRMKDEDWFD
                     IIQTNLTSVYRLSKAVLRPMMKKGGRIITIGSVVGSMGNPGQTNYCAAKAGLVGFSKS
                     LAKEVASRGITVNVVAPGFIATDMTDELTEDQKNAILSQIPAGELGSPQDIAKAVAFL
                     ASDDARYINGETIHVNGGLYMS"
     gene            complement(45389..45853)
                     /locus_tag="PXE50_000113"
     CDS             complement(45389..45853)
                     /locus_tag="PXE50_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621058.1"
                     /translation="MSKETLFMLISALIALVILPLAYTVGIAKETLGGNMGMLSIAAG
                     CSFLAYFLSLNPKIRHAFIGGSAITAAAIQAWVLYGVLLSENDPKSAVVLFQIYLFSS
                     LGPLFFSAIWAFTRPRWIYPKQGSAVKYALFGGLTTVINYLITLFIFYILTL"
     gene            complement(45870..46805)
                     /gene="fabD"
                     /locus_tag="PXE50_000114"
     CDS             complement(45870..46805)
                     /gene="fabD"
                     /locus_tag="PXE50_000114"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HDL5621059.1"
                     /translation="MSKFAMVFPGQGSQAVGMLADLAPQYPIVEETFKQASDVLGYDL
                     WDLVQNGTAEELGQTHRTQPALLASSVALFRIWQQKFPEQKPAVMAGHSLGEYSALVC
                     AGVLDFQDAIKLVELRGRAMQEAVPAGSGAMFAIIGLDNESIIKACEQAASETGEIVS
                     AVNFNSPGQVVIAGTKAAAEKAGELCKAAGAKRALPLAVSVPSHCALMKPAAEKLAEA
                     LQNIELNQPLVPVINNVDVAVETDADTIRNALVRQLYSPVRWTETVEKMAQDGITTLY
                     EIGPNKVLTGLAGRIVKELSAKAVNDVASFEAVEA"
     gene            complement(47222..47968)
                     /locus_tag="PXE50_000115"
     CDS             complement(47222..47968)
                     /locus_tag="PXE50_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HDL5621060.1"
                     /translation="MTEQNQRPQEHIESVRARRRAQNQKKGPNAPFVREKLTLPNGHN
                     KLLLHSCCAPCSGEVMEAIHASGIEFTIYFYNPNIHPLKEYLIRKEENIRFAEKWGIP
                     FIDLDDDYENDRKEWFKKAKGMEWEPERGIRCTMCFDMRFEKAAEYAHNNGFPVFTSC
                     LGISRWKDMNQINDCGHRAAAKFDDVVYWDYNWRKGGGSQRMIEISKRERFYQQEYCG
                     CVYSLRDSNKWRLETGRQRIEIGKLYYSPD"
     gene            complement(48071..49069)
                     /gene="ispB"
                     /locus_tag="PXE50_000116"
     CDS             complement(48071..49069)
                     /gene="ispB"
                     /locus_tag="PXE50_000116"
                     /EC_number="2.5.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="octaprenyl diphosphate synthase"
                     /protein_id="HDL5621061.1"
                     /translation="MAVQLFSLEQIQALANEDMQAVNAEILAQLNSEVLLINQLGHYI
                     IAGGGKRIRPLIAVLAARALGYRGKKHITAAAFIEFVHTATLLHDDVVDESDMRRGRP
                     TANAHFGNAASVLVGDFIYTRSFQMMTDLDSLRVLKVMSAATNALAEGEVQQLMNVND
                     PNTTEANYMRVIYNKTARLFEAATQCVAIAADASEEIETALKNYGCYLGTAFQLIDDI
                     LDYSAQSESLGKNVGDDFVEGKPTLPLLHAMHAADKAGKTTQAELIRNAIENGGELEQ
                     IPQVLAIMQEHQSLDYAMQKAREEAQKAVDSLGVLPESEYKQALVSLAYLSVDRSY"
     gene            49347..49658
                     /gene="rplU"
                     /locus_tag="PXE50_000117"
     CDS             49347..49658
                     /gene="rplU"
                     /locus_tag="PXE50_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015960603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HDL5621062.1"
                     /translation="MYAVFQSGGKQHRVSEGQVVRLEKLELATGEKVEFDSVLMVVNG
                     EDVKIGAPVVAGAKVVAEVVAQGRGEKVKIVKFRRRKHSRKQQGHRQWFTEVKITGIQ
                     A"
     gene            49679..49936
                     /gene="rpmA"
                     /locus_tag="PXE50_000118"
     CDS             49679..49936
                     /gene="rpmA"
                     /locus_tag="PXE50_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007369914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HDL5621063.1"
                     /translation="MATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTK
                     FHAGSNVGMGKDHTLFATADGKVKFEVKGEKSRKYVSIIAD"
     gene            50038..50715
                     /locus_tag="PXE50_000119"
     CDS             50038..50715
                     /locus_tag="PXE50_000119"
                     /inference="COORDINATES: protein motif:HMM:NF013088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL5621064.1"
                     /translation="MKQRPLLGFSLALTAAMTWGTLPIAAQQVLKVIDAQTLVWVRFV
                     VASVGLLLILGFAKRLPKLTACSKKELGLILLGVCGLSANFFLFAEALHYVSPTINQV
                     LWQLAPFSMILLGVLLFKEKFGLFQKIGFVLLIAGLVAFFNDKFAEILQLNTYALGVL
                     LSAGASLIWVLYGVAQKLLLAKFNSQQVLFIIYIGCSLLMLPFASPAQLGNLEDGFLW
                     GCFIYCC"
     gene            50688..50957
                     /locus_tag="PXE50_000120"
     CDS             50688..50957
                     /locus_tag="PXE50_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HDL5621065.1"
                     /translation="MGLLYLLLLNTLIGYGSYGEALNHWDTSKVSIVTTMLPIFTMIF
                     SNLSYYFYPHIFAKPDMNWISYLGALVVVSGAILAIAGDKLFRRN"
     gene            complement(51005..51817)
                     /locus_tag="PXE50_000121"
     CDS             complement(51005..51817)
                     /locus_tag="PXE50_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005610932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HDL5621066.1"
                     /translation="MKSLQKPIKIVFFDIDDTLYVKHKAYIPKSITEQVLPRLKAKGI
                     IPAIATGRNHGCFPEALKPYLNPEIGFELFVTINGQYNFYKDQIISDYSLSREQIERI
                     IEKANALGILYAFITPMTIAVSETNPIVHEAVLPITPNYLIDPHYYEKEKIVQMLLFY
                     TEEQKQAVENSGIFANDLKEARWHPNAVDILRKENSKARGIQDVLATLNIEIESAMAF
                     GDGINDLEMLPTVGVGVAMGNGVPELKAVADFITKPLEEDGILYALETLEVI"
     gene            51935..52612
                     /locus_tag="PXE50_000122"
     CDS             51935..52612
                     /locus_tag="PXE50_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HDL5621067.1"
                     /translation="MNLFGFRCFHCNHPLAIGVQGICSHCQKLLKPTPYCRHCGMSAV
                     EFRNACGYCLKNEPKWHKLVRVNEYRAPLSHWVHQFKFQQQYWWDQALARQLLLAIKQ
                     AQREQVLSLPEVIMPVPLFWHRHWKRGFNQSELLCDWLSKWLQIPLDTQSLQRVRATV
                     SQRELTAAERRKNLRGAFFYQPLKAYKRVAIVDDVLTTGSTLNVICAELLKAGVVEIQ
                     VWVLARA"
     gene            52735..53145
                     /locus_tag="PXE50_000123"
     CDS             52735..53145
                     /locus_tag="PXE50_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HDL5621068.1"
                     /translation="MNSTLTNLQPLAFLITRVVAGYMFLLHGTAKFFEFPMSMTNGNG
                     SVPLASIYGVGGILEIVGGIFFILGLFTRQTAFILSGMMAYAFFIAHGAQGNVLLPLL
                     NGGELAGVYSVLFLTYIFIGGGKYSLDAKLFNKA"
     gene            complement(53225..54559)
                     /locus_tag="PXE50_000124"
     CDS             complement(53225..54559)
                     /locus_tag="PXE50_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HDL5621069.1"
                     /translation="MLYAEFLLLLAFLYAGSRYGGIGLGVVSGIGLFVEVFFLGMPLS
                     APPISVMLVILAVVTCASILEAAGGLKFMLQVAERILRSNPKRITFLGPLVTYLMTLM
                     LGTGHSVYSIMPIIGDIALKNKIRPERPMAAASVASQLGITGSPLSAAVAYYLTEIVK
                     LPGFEGVTLLNVVGVTITATFCGVIAMSLYSLRRGKELEDDPEYQRRMQDPELRKQIE
                     QTSATSLDEKLPASAKNSVYLFLAAIATIVIIAMIPAIKPTVAATGKVAGMDQIIQIV
                     MLTFGGLILILTKTDPKKVPNGIVFKSGMVATIAIFGIAWMSDTYFTHAMPAFKEGVT
                     EMVRAQPWTFAFALFAVSVVVNSQAVTAKMLLPVGIAMGLPAPLLVGLMPATYAYFFI
                     PNYPSDIATVNFDVTGTTKIGKYYFNHSFMAPGLVGVITACIVGIAVANVLI"
     gene            54749..55588
                     /locus_tag="PXE50_000125"
     CDS             54749..55588
                     /locus_tag="PXE50_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HDL5621070.1"
                     /translation="MQSYPYLLVNVFATSHFGGNPLAVFYEADGLTDLQMQLIARQFN
                     LSEVVFIQSSTDSQAVKKLKIFTPDYEMPFAGHPTVGAAFVLHSAFDFPTTYRLQTNA
                     GLVAIQHQHNVTTFALTNGVNLENTPLSRAECASILGLNVADIASEPCYVNTGVEQLL
                     VELASQQAVEKCKINANLAEKAFLKDSVYVWCREGNEAKVRLFFQSQGSIVEDPGTGS
                     AAANLGGWHIAQGKIPIQLQISQGDEIQRPNRLLLKVDQNGKIFVGGEVILVGKGEFY
                     LPE"
     gene            55676..56680
                     /locus_tag="PXE50_000126"
     CDS             55676..56680
                     /locus_tag="PXE50_000126"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005651072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HDL5621071.1"
                     /translation="MAFNLKNRHLLSLVNHTEREIRFLLDLARDLKRAKYAGTEQQKL
                     KGKNIALIFEKTSTRTRCAFEVAAYDQGAHVTYIDPNSSQIGHKESMKDTARVLGRMY
                     DAIQYRGFKQSVVQELADYAGVPVFNGLTDEFHPTQMLADVLTMIENCEKPLSQISYV
                     YIGDARNNMGNSLLLIGAKLGMDVRICAPKALLPEDAFVKMCEKFAAESGARMTVTED
                     IETAIKGVDFVHTDVWVSMGEPLESWTERIDLLMPYRVTPELMQATDNPKVKFMHCLP
                     AFHNSETKVGKEIAEKYPALANGIEVTEEVFESPMNVAFEQAENRMHTIKAVMVASLA
                     "
     gene            complement(56791..57504)
                     /locus_tag="PXE50_000127"
     CDS             complement(56791..57504)
                     /locus_tag="PXE50_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HDL5621072.1"
                     /translation="MAMSQGFQFKQFFIRHDRCAMKVNTDGILLGAIAHIKDCQNILD
                     LGIGSGLVALMLAQRTDDCCHITALELEPNAYQQAVENAQNSAWANRISVLQGDVMQQ
                     AFEQKFDLIVSNPPYFADSLAARTTERDLARSISHYSHLNWLAKAKPWLAENGKITLI
                     LPIAAAEKLVDQSEQIGLYCVEQWLIFTKSGKLAKRSIVSFSLNKQKREHKELIIYDL
                     DNCYTTEFKRLTQDFYLNF"
     gene            complement(57563..58069)
                     /locus_tag="PXE50_000128"
     CDS             complement(57563..58069)
                     /locus_tag="PXE50_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HDL5621073.1"
                     /translation="MAMSNIGLDKEIAKKLADELNGLLATYQVFYTNVRGYHWNVRGV
                     NFFELHAKFEEIYDDLVTKVDEIAERILTLGHTPQNAFSQYLTKSQIQEHIGVSAAQE
                     CLRGTLNGFKTLLGQQREILALANDANDEGTASQMSDYIKEQEKLVWMFTAACAECSD
                     YAQGCSCN"
     gene            complement(58244..60646)
                     /gene="mrcB"
                     /locus_tag="PXE50_000129"
     CDS             complement(58244..60646)
                     /gene="mrcB"
                     /locus_tag="PXE50_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1B"
                     /protein_id="HDL5621074.1"
                     /translation="MSDVELNEQSEQEPEQKPKKRNYFLSTLFKIGVIGACSMAFYGI
                     YLDGKIRSKMDGQIWELPAEVYARIESIKIEDNLTLEQTKQALLDNGYRQVSQVATPG
                     DFKIEENQLVLLRRAFPFPETPESQRVLRLTFKQDKLTYIEDLVQGKLIEEFRLDPKL
                     LALLHSDSDEERQALRLQQYPRLLIESLILTEDRRFYQHDGISPIGIARALITNYQAG
                     RTVQGGSTLTQQLVKNLFLSNERSLVRKVNEALMSVILDFRYDKNRILETYLNEIYLG
                     QNGSYQIHGFALASQFYFGRPIQEISLDQIALLVGMVKGPSLYNPWRNPQGAVERRNV
                     VLRLLLDHQVINQELYALLSSRPLNIREKGTIYREQPAFMQALTIDLKNELGEIKSAQ
                     LSGTKIFTTLDRKQQRSAEQAVITGLEDLESKNKKVSDLQSAIVVAEYRTGKVRAIVG
                     DRLTQFAGFNRAIQSKRQIGSLVKPSVYAIALAQPELFRLNTPIQNKQISIKVGSTYW
                     TPRNYDRSFSGSVMLMDALVRSLNIPTVNIGMKVGLKKVIAKQKEMGWDNAEIPPYPS
                     TLLGSYSISPYDVTRSYQVIANEGLKTPLTTIEAIISHNGEMFYQRDSGKVSEQVLPP
                     EAAVQTMYAMQQVVERGTARSLQNDFAKLKLAGKTGTTNNARDTWFVGIDGEHVTTVW
                     LGKDNNGDTNLTGSSGALYVYKQYLERALPQAYRLPKLNTMQWVGINSYGSWNCDSGR
                     QIPVWRDKGQRYCTSAGNVVATEKPSVWDALSLKKENIEAKAEEAEGKQPIPTEEVAP
                     IE"
     gene            complement(60729..61586)
                     /gene="menB"
                     /locus_tag="PXE50_000130"
     CDS             complement(60729..61586)
                     /gene="menB"
                     /locus_tag="PXE50_000130"
                     /EC_number="4.1.3.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005723289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA synthase"
                     /protein_id="HDL5621075.1"
                     /translation="MLYPSEEFLYAPVEWVDHSEGYTDIRYHKSKDGIAKITINRPEV
                     RNAFRPQTVKEMIEAFSDARFDEKIGVIVLTGEGEYAFCAGGDQKVRGDYGGYKDESG
                     VHHLNVLDFQRDIRTCPKPVVAMVAGYAIGGGHVLHMLCDLTIAADNAKFGQTGPKVG
                     SFDGGWGASYMARLVGQKKAREIWFLCRQYNAQEALDMGLINTVVPYADLEKETVRWC
                     REMLQNSPIALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNEKREP
                     DFSKFRRNP"
     gene            61764..64793
                     /locus_tag="PXE50_000131"
     CDS             61764..64793
                     /locus_tag="PXE50_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4981 domain-containing protein"
                     /protein_id="HDL5621076.1"
                     /translation="MSLPNYYQDPSVLHLNTTLHHAYFIPFAKGQTPNQLEREQSELF
                     TLLNGDWKFNFYPSPHDLPEDFLNTKFTHQIPVPSNWQTQGFDAHQYTNINYPIPFDP
                     PYVPHQNPCGVYQREITFNPKPNKRYLLNFEGVDSCLFVYVNGEFVGYGQISHSTNEF
                     DITKQLKQGKNSLVVVVLKWCDGSYLEDQDKFRMSGIFRDVYILEREQNYLQDFFIRY
                     QLNADLSKAELKVETQFSTYTEAVHFQLFDPENRLVCEQTSGDFCQEICNLCLWNAED
                     PTLYTLCLSYQNEIIEQKIGFRQIRVENGVMLFNNAPIKFKGVNRHDSDPKTGYSISR
                     EQALVDLRLMKAHNINAIRTAHYPNAPWFSELCDQLGFYLIAESDLESHGSSAVYIES
                     PENSIFLNVPNPNKQEEIRQQAVDNFCYFARDPLFKQAILDRNIANVERDKNRTSVII
                     WSLGNESGFGENFEVAARWVKQRDPSRLTHYEGSIYQHSAHQNDLSNLDLYSEMYPST
                     ERLEEYFSDSANHKPFILCEYSHAMGNSSGDMEDYWQTFQRYSGACGGFVWEWCDHAP
                     LLPNSELSAEQKTEKYGYGGDFGETLHDGNFCMDGLVSQQRVPHSNLLEVKNVNRPVR
                     AELKAGKIWLKNQLDFSDLADYLTVHYCFSENGETTLQGQCLVNCQPNQTACLPLTLP
                     EPNGKLQLLTLDYSLNESTALLEKGHHLGFDQITLHQAMVTPALNPRPQAVIFVQDFA
                     NEWRIQQGDYRYTFDKLKGIFSRIEKNGEAVIEQPLDFNIWRAPTDNDRLIREFWKKA
                     GYDNCYTRAYHTELMQDKNGVNITAECGIVATAQSRILTLKVNYHLAPNGEMTIQVQA
                     TRPAHLPFLPRFGLRFFLNKRNNQVSYFGYGEQESYIDKYHLAKLGAYQTSARENHTD
                     YLKPQENGSHFGTHYVQANGITVTSPQPFSFNLSPYTQEELTTKSHSYDLVESPSTVL
                     CVDYKMSGIGSNSCGPNLKPQYRLNETNFEWRLKLSF"
     gene            complement(64836..66641)
                     /locus_tag="PXE50_000132"
     CDS             complement(64836..66641)
                     /locus_tag="PXE50_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4153 domain-containing protein"
                     /protein_id="HDL5621077.1"
                     /translation="MLSKLQRFTLMIKSTIIKHPLEILFVTYVTILLINNVSDYELIK
                     RFQNLIALFPICFILLYLIRDTKAYWLFAPIPIAIVFFFGQINLTLLEDSRYWATIFC
                     VFLCLISQYWYKNNHYFVAGTTNKLVNIVFATVLSGIIFATLSAITIAIIALFDLNKQ
                     NNFHIFEKFGIFSSFWAFPVLFLTLEQQTTNDSRYLNRISEMLLNWILSPALIIYTAI
                     IYAYVIFIAAKGQMPDGVVANVALPYLAFGLAIQAVQLLLKNAKWQWFYSHFTYLALL
                     PLTLIWYAIYIRFSHYGLTEARIYLVIGTITLSICYTLLLFKQLAQYRLFSAVSIAII
                     LISVFILDPKTVALKDQTKRLDNYLLKHKLLDVNNKISTKAVLKYQESLNENRDEAEY
                     FYSMLHYVARGMPAAQFKEKYGVNSSYDLMSEIRERNTDPRYFEATNSELVRLTKADM
                     ANAREYITFSSQLYRPNSFSHQKIENKLCQKRLSQGYYFEGNILNIEYQYSETAQDCS
                     SITQDPTEFVIYFKGLGTTIEFNINDILKKIFAKHQLSITQQHKNEVLEKIKGDLLKM
                     DLGNSVLGLKHIELRFEDNIGYIVESISTQYIMLK"
BASE COUNT        19052 a        13607 c        14391 g        19627 t
ORIGIN      
        1 ttattaaagc acgacttttg ttgtatttca aacctttgtt tttatacaaa acaaccgtgt
       61 tgtaaaaaat gatcgtaaac tgaccgcttg taatgcactc tgaatatatc gaaacatgat
      121 aaaaatgata aagcatgttt cgataattta ctgtctttag tcttttaaat gttttgcatg
      181 aaaggctata tgttcaccga taaagctact aatgaaatag tagctgtgat cgtaaccatc
      241 acgtaaattg aattggtagg gtattccaag tctatctgcg gtttcacaga aaatttccgg
      301 ctttaactga tcgctcaaaa agctgtcttg gctgccttga tcgattagaa ttggcaagct
      361 tgggcgatat ttttccagca atgccacgct atcatacgcc ttccaagcgg tctgatcttc
      421 gcctaaatat gctaaaaatg ctttttgccc ccaaggaact tgggttgggg cgacaatcgg
      481 tgcaaatgcc gatacacttt gatattgccc cggattttta aatgcaatgg ttaaggcacc
      541 atgtccgccc attgaatgcc caaaaattga ttgtttaccg ttagtcggga aatgagcatt
      601 aatcaatgtt ggcagttcgc tgacaatgta atcatacatt tggtaatgtg ttgtccattc
      661 gccttgcgta gcatttaggt aaaatccggc accctgacct aaatcataag cctcatcatt
      721 agcgacattc acacccctag ggctggtatc cggtgcgacc acaatcagat gatgttcgtc
      781 ggcataacgt tgaaagccag atttagtgat gaagttctgc tcggtacagg ttaaaccaga
      841 aagccaatat agtacgggta gcttttgtgt tttagcagat tgcggcagat aaatagcaaa
      901 tttcatttca cagtttaagc tggctgagaa atgttgccaa acctgttgtt caccgctaaa
      961 acagcggtag ttttcaaatt gttgcataat attccttaca agcggtttaa ttccgctgat
     1021 tttttgcaaa aataaaggcg gaactcaccg cctttatatt gtaatatcaa cctttcaaac
     1081 ttcccatatc aatcacaaac cgatatttca cgtctgattt cagcattcgt tcataagcat
     1141 cattgatgtt ttgcatatca atcatttcca catccggcac aatgttgtgt tcggcgcaga
     1201 agtcgagcat ttcttgagtt tcctgaatgc cgccgatgac agaggcggaa atagagcggc
     1261 ggcctaaaat catcggtacg gtgttgatgg tttgctccaa ctcaccgacc aagcccacca
     1321 gcaccaatgt gccgtccaac gctaaggttg ggatataagg tttcaagtcg tgggtataag
     1381 gcacggtatc gatgattaaa tcaaaggtat ttgcaacgtc tgccatttgc ttttcatcgg
     1441 tagaaagcac cacacggctt gcgcccaaac ggtaagcatc atcggcttta cccagtgagc
     1501 gagtaaaaag cgtaacttcc gctcccattg ctttggcaag tttaaccgcc atatgcccca
     1561 gtccgccaag ccccacaaca gcgacttttg agccagcttt gacattccaa tgacgcaggg
     1621 gcgaataggt ggtaatgcct gcacacaaaa gaggggcaac cgctttggtg tccaagtttt
     1681 cagagacttt taatacaaaa tcttcactca ccaccacgca tgtgctgtaa ccgccttgtg
     1741 ttggtgtgcc gtcaaagcgg tcaataccgc cataagtgcc gatgttgccc acttcgcagt
     1801 actgctccaa accgtgctgg caaggactgc attcacggca ggaatccacc atacaaccga
     1861 caccgaccaa atcgccgatt tggaattttt tggcgttttt accgactttg ataatacgac
     1921 cgatgatttc gtgccctggt acaagcggat agctttgcgt ccagccccaa tcattgcgag
     1981 ccatatgcaa gtctgaatgg cacacgccac agtacaaaat atcaatcaaa acatcgtctt
     2041 caagcaattc acggcgttca aaactgtgtg gggcaagtgg tgtggttgcc gaaaaagtgg
     2101 cgtaggattt gatagggtaa gccatttttg gggtttaaat ggctgaaatg gcaattacta
     2161 tagtgccgat gatttattat tgaaaatcaa gatttttgat aaatcggtat cagttaaaat
     2221 gataattggg ggttttcaga ctgactgaaa aattattttg cccattttaa aaacaaaaac
     2281 accgccctca tcacaaaagc ggtgtttttc atcaaaattg tgtcaaagca tactctgcca
     2341 attctgtaag cacttcatca gcaggacgct gagtgggttt taaattgagt gccaaatgtt
     2401 tcacgccttt ttcttgttct tttgcccaaa agtctgccaa gccttttgca ccaccacgca
     2461 gataaatgtt gttaaataac tgtgctttgg cgtttttgtc gtccaaaact tccacaaatt
     2521 gagcatagcc aaatgctgtg ggggtgtctt tttggcgtaa atcggcaagg gtgttgatga
     2581 tgtttgcggt gtcggcagga ttcacaccgt gccaaatcca cgcatcaggt acattagcaa
     2641 gccagtccat ttcttgcctt gctcgtccaa tcgccacaat gggcaagcgg tgtttgggtt
     2701 tggggagcaa atccaaattg tctgttaaat cggcataatg tttgcctttg aaatggggaa
     2761 aatcctgctc ggttaaggtg ttaatcaaat caatgctttc acgaaaacgc tcgctacgag
     2821 aggcaaaatc cgccccaaat gcagggtatt ccacaggtct atcgccagag gataagccca
     2881 ataaaaaccg tccatgactc aaactatcca cacttgtcgc cattttggca atgtgaatgg
     2941 gactacgcaa aggggcaatc agccctgccg tgccaagggc gatgttttgg gtgtgggcgg
     3001 acaaaaaacc aagtgtaacc atcgggtcaa gcccttgccc cacatcgcca aaatgagggt
     3061 cataaaacgg cacatctcgt acccacaatg ctgaaaagcc caagttttca gccagccgtg
     3121 cattgtcggc aatggtggtc aaattgtctg gaatgtgatt ttgatagccc ataaaggggg
     3181 caattaagcc cagtgttaat tgattttgcc caaaaacttg ggagaaaatg ggggaaagcg
     3241 tgttcatttt ggcgtacctg tcttatttaa gataaggtat tttaagggct tttgagtttg
     3301 cttaaaatgg gataaattga gaaagtgttt tgctaaattg gcataaatag acgctttcaa
     3361 gctgactgaa aatttgcaaa atttttaata aaaatgaccg cttgcctttc aacaagcggt
     3421 cattcccctt taatttttta ccaccgtaaa caccttattt ttcagccgat attcactttt
     3481 ttcatcgtga gccagttgca caatggttgg cttgcgttta cacaattcac gcattgcaca
     3541 cgccgtcaat gttgccagca agcatatctt gttcagagta agaggcatcg ccgccaatca
     3601 aaatataatg ctcgcccata tccaccacca ccgccaaatg ccccagcgta tgtcctgcgg
     3661 ttggcacaag gcggattttg ccgtctttgg tgagtttatg actgctctca aaactttcaa
     3721 acgccccatc attaaaatag atgccatcag gcttaaacca atcaggatag tgcattgtta
     3781 aataaccgtt catcaccgca ttgggggcgt tgattgcctg tttttcagtc tcactcatca
     3841 caaatcagct gtttgggaaa ttgggcaatc cgcctgcgtg gtcgccgtgc atatgggtca
     3901 ttaccaccgt gtcaatgcgt aaagggtcaa agccgtttgc ctttaaaatt tcgcccactt
     3961 cttcgtgttt tttgacccca cgccgttcgc aaaactgcat aaacgggtgc caccacggct
     4021 gatagccctt gtcgttggca cgactgcttt cgcccgtatc caccaaaatc aaaccgtcat
     4081 cgtgttcaat cagccagcaa ccaatcggca gtttaggcga ccatttttta tcggtcagca
     4141 catcaagcac acgggcagga cgggcaaaaa agcgtgccac ttgatgatga attttgattt
     4201 gtacccaacc tgttgtcaga caatgcactt taatcatttt tgtgttctca ttaaaaaatc
     4261 gtgggcatat tgtagaaagt gcggtaactt ttcacaaaca ttaaaaagtt cgtatttggc
     4321 tggatatgca gataaaatta caaaaatgta tgcttatttt gaaaaaagat gaacgattta
     4381 agagtaatca aaacccatct agcaatccaa aacgctttga ttgaattatt agatgaaaag
     4441 ctgtttgaaa aagtgcaagt ccaagaaatc attgaaaaag ccttgattaa ccgcaccact
     4501 ttttaccgtt attattcggg cgaaagtgat ttggtcggca aattgataaa agaggtgaag
     4561 gcggaatatc aagacctgct caaaaagcgt tttgaaagcg gtaatttgct gcgatttatg
     4621 caaaccattg gcaaccgctt attggaaaaa agacggctga ttttggcact ttggcaaatc
     4681 aaaacccctc gccatcattt gtatgacgat atgcacatgc tgttaaaaaa cgcctttatc
     4741 gcccacgcca aacggataac atcagatgat aaaaactggg ctgagaaaaa ttgggattac
     4801 caagcccata tttttgccac cattgccctt gaaagccata aatattattt tgaacaaggc
     4861 aaacttttgc ccattccaca ggtgtttgag gagtggatag aaatggtgca ggtgttgaaa
     4921 agtgtttaga aataactggt aaaattttcc ataaaaaaca ccgctttcat cacaaaagcg
     4981 gtgctttcaa atcatcaaac cttaaccaca atcttaccaa tctgctgatt gcttgccata
     5041 tattcgtgag ctttaaccat ttcatcaaag gcaaagattt tgtcaatttc agggcgtaac
     5101 tgaccgcttg ccaaaccgtc atagacaaag gttttggctt gtgccaattt ttcaggtacg
     5161 gtggtaattt caaagagttc atacccccgc acggtcaaat gcttacccaa aatcgggaac
     5221 actggcacag caatatcatc atggcttaac gctccataaa tgatgtaacg accatcttgt
     5281 gccattgcat tgatgatttt tgccgcctct tttctgccca cagggtcaaa taccacattg
     5341 acgcctttgc cattggtgat ttcaaaaagt ttggcggtta catcgtcttc gcttgtggca
     5401 atcacaaaat ccgctccttt ttccaaaagt acatcgcctt tggcgtgggt gcgagacaag
     5461 gcaatcacgg ttgccccttg cattttggcg atttggatac tggctaaacc aaccgaactg
     5521 gttgcaccgc ccagcaccac aaaatcgcct ttttgtactt tgccaaactc aatcagtccg
     5581 ccataagcgg taacaaacgc catccaactg gcggacgctt gttccattga caaattatca
     5641 gggtgcttga ccacagcgtg ttttggcata ttgacgattt cgccataagt gccgtattcg
     5701 gtaaacataa aggacggaat aatgctcacc ttatcgctaa tggcaacttc gttcacaccc
     5761 tcgccaatcg ccacaatcac accagcccct tcataaccca aagtcgcagg gaatacaggg
     5821 tcaatcacat acgccccttc acggtacatc atttcggcac ggtttaagcc aatggcttgg
     5881 atttggattt gtacttcgtg tgcttttggt gcaggaattg ctacatcaac gatttgcaag
     5941 acatcaggcg aacctgtttt tgtaaattgg atttgtttgc tcattgtttt gaccttttgt
     6001 gtaaataatg ggcgtatttt aatgcaatga atttatttta aacacaacat caattgcaaa
     6061 acacttttgc taaatttaca taaatacatt ttcacaatgt ctgaaaagtt gttttgcaaa
     6121 ttttaaaaag aaaaccaccg cttgccgatc acaagcggtg gtttttgtgg gttattttgc
     6181 aagaggtgtc agcttggcta cagtaagcgg ataaatgcga cgccggctaa gagtaaggta
     6241 acgccgatga tctgcagcgg tagaatgggt ttttgtgtaa tgccgaacag accgaattta
     6301 tctaccagca ggctgccgca aatcaggcca gagaggacga gcatcaccac cgagcctgtg
     6361 ccgatttggg ggacgagcca aacgccagcg aggataaaca ggctgcccag tatgccgccg
     6421 ctccatatcc aaaacggttt gccttcggtt ggctggcaga gtttcggcag gcttttttca
     6481 taaaacagca ctaccagtaa taagccgatg gcaccgacac cgaaggagac tgttgctgcg
     6541 ccgagtgatg agccgggctg tctgccgaat tcgccattaa cggcggcttg ggttgctaat
     6601 gcggttccgc ctaatatgcc gactgcgcgc cacagccata aatttgcgtt ttctttgcgt
     6661 tttagaccgg acagatgggg cagtaccacg gcaatccata cgccgaataa gactaaacca
     6721 atgccaaaca ggcggctggc cgtgaaggct atgtaaggcg agttaagcca agcgaaagtg
     6781 tcgatcagca cgcccatcag cacttggcct aaaatcggca tgaccgcagt ttgtacgccg
     6841 ccgagcttgg ggaagatcag tacgtttgcc gttagcccca ccatgccgag taatccgccc
     6901 gtccatgccc ataaggggac gttgcctaaa ttgtcgaggc taaatgctgg tgtttgttgc
     6961 atgatgagcg agagtccgag tagaaacagg aggcctacgc tgaaagagac aaacgaggtt
     7021 aaaaatgccg cacccacgtg catacgcaaa cgggcgttga tggctgattg aaatgcaatc
     7081 agcacgccgg ctaaaatacc gataataaat gtcatgacta actgggttgt gctgccgcct
     7141 caaaatgagt ggtggttgaa aagaaatgcc gtctgaatgc ggattcagac ggccttaagg
     7201 cttggtatcg gcgtttacct gatgttgaat agccgttttg cctagccggt ttattcgatg
     7261 aatttcacca cggtttcgaa atctttacgt gctttttggc ggatttcttt atcacggtaa
     7321 ccgaaggtac acatcaccga tacgccccat tcgcttgggt caaataatcc ttccgctgcc
     7381 aaaatatcgt tgacttcttg gtaagcgaaa ccttctatcg gacaagaatc tacgccaatt
     7441 aaagctgcac cggtcatcat attgcccaat gcgatgtagg tttgtttgct tgcccagtca
     7501 aacaggctgc gttcgctgtc taaaatgccg atatctttct cttggaattt tttatacacg
     7561 gccatggctt tttcgcgcgc ttcgccttgt aaacctcgtc tatccataat ttcagaaaaa
     7621 tattggctgt cgtaacgggc atttttcttc gctaaaatca ccacgatatg gcttgaggtt
     7681 tccatagttg gaatgcccca gcagtaaggt ttgatttttt gccgtaattc agggttttgc
     7741 aacactaaaa actgccaagg ctctgagcct accgaacttg gacttaaacg accgagttcc
     7801 agaatatagt tgaaatcttc agccggaatt tttctgctgc cgtcgtaaga acgggtagat
     7861 gcacggtaat gaaaggcatt gattacgtct tctttgttga aaaattgcat ggaacactcc
     7921 taaaaatgca aaacagtctt ttcagacggt ctgaaaagtc tagatgaaat acggataagt
     7981 ataaaagatt taagttattt ttaataattg ataattttga tatttaggta taagttgacg
     8041 tgatgagaaa aaacagaccc tctgaatgtt caggcggtct ttaacgttgg ttgtttacat
     8101 aaataatccg cgttcatatt gcttcggtac aaactgcatt tcactgctgt ctgctgcatt
     8161 ttggtcatat tgcgcattca atacccagta cggatcgcgc aataaggctc ttcccacagc
     8221 cactaaatcc gcatcgccca tacctaagat atgatcgcct accgccggat tatccaacat
     8281 acctactgca attaccggtt tgcccgtagc gagcttcact tgacgggcaa agtctacttg
     8341 gtaacctgcg taaaattcgg ggtgattacc tgcatgcaat acaccatcac caccaccgct
     8401 gatgtctaag acatctgcgc ctgcatcggc aaaacgtttc gctacctgca aaccataatc
     8461 caagccaaag ccgttttcac cgtattcttg tgcagaaatg cggacaatta acggcatttc
     8521 agacggcatc acttcacgtg ctgcctgaat cacttgctcg ccaaacaaca ttttgtcttg
     8581 gccgtactca tcactgcgct gattggattt cggcgaatag aattggtgaa ttagataacc
     8641 gtgtgcgccg tggatttcaa ttgtatcaaa gcctgcctca acggcacgtt tgaccgaatc
     8701 cttaaaggct tgaaccaatg ctttgacttc gtctgtcgtc agctcgcgag gtgtaatcag
     8761 attttgtccg gcataatcca actcaccgta gtgaattgca cttggagcca ctgcatccgg
     8821 ctcgtcttgg gctttgcgtc cggcatgggc gatttgcaca ccgatttttg ccccttgagc
     8881 atgaacgctg tctaccagtt ttttgaatgc ctgttgttgt tcatcgttcc ataagcctaa
     8941 gcagtttggc gtaattctgc cgtttggcgc cacattggtc atctccacaa taatcaagcc
     9001 gacaccacct actgcacggc tggtgtaatg cacgaaatgc caatcgttcg gtacgccgtt
     9061 ggttgccgaa tattgacaca ttggtggcat aaccacacgg tttttcaatg ctaagttttt
     9121 aatgttaaac ggggtgaata attttctgaa cttcgccatg ttgccttcct taatgaaata
     9181 gattaggtgg aatgataatt cagtgctatt atctattcaa attgattatt gtgatagtta
     9241 ggtataaaaa tgagtgatat aagaacactg gatttcaatt tgctcaaagc ttttgtggtg
     9301 ctgctggacg aatgcaacgt tagccgggca gcacaacgat tatccatcac ccaaccggca
     9361 atgagcggta ttttaaaccg cttgcgcgag agttttaacg atccgttatt tgtgcgagtg
     9421 caacacggta tgcagccaac cgaccgcgcg ttgcaactgg ggcaaaccgc acgcaacatt
     9481 ctgcaagata tcagctccat gctgcaacca cccatattgg aaccggaaca tctgaatatg
     9541 accttgcgta ttgccgcaat ggattatgta caacaaatta ttgccttgcc gctgattctg
     9601 cgtttaagac ggcttgctcc gaatgtaaaa gtcgccttac tgccggtgca ggggcaaaat
     9661 atcaaaactt tgttcgagca aaaaaaaatc gatcttgcct tggtcagccg ccaacattta
     9721 agcacggata cgctgaaaac ggtattatat gaagaacgct acgtatgcgc gatgagcaaa
     9781 acacacccga tggcgcaaac accgctatcg ctcgatcaat tctgcaatct tcccttcgca
     9841 atgctttctt acaacggcgg agaattcagc ggagctacgg atctagcgtt acaaaagata
     9901 ggactacagc gcaaagtaat ggtctcggta aaccatattt ccctgctgcc ccagctgcta
     9961 caaggttccg acttagtcgc agtattgccc gaacgcttag caaaaacctt acccaatgtt
    10021 tatttacaac ctccgcctat agaggtagaa ggcttcacca tgatgatggc ttggcacgaa
    10081 agaaccgaac aagatacggc gcatcgatgg ttaagagagg tgctgcaggg tgtggtaaaa
    10141 cctaaacagg ctctttaatt attctttctt ttgctatgaa aaaagccgtt tatattttta
    10201 gataaacggc ttttttgcat tctaatatta gtatttttct acaaactgag cataggcatt
    10261 aatgaagttt tgcattgagc tttttaatgt ctcagaggca atttcaccct gttcatcaaa
    10321 tacgcctgta aataagtttc ctacgtttaa tgcgaaaggt aaggttggca tatttacaaa
    10381 tgagcctgaa gtaatagtac gtacttgatc agctgcacgt acaccgcctg ccgggcttgc
    10441 gccaacggtt acgatacctg ccggtttgcc aatccatttg ctttgcccca ttgggcgaga
    10501 aaccacgtca atcgcatttt taagcattgc agaaaagctt gcattatgct caggtgtgac
    10561 taataacacg ccatctgcca cagcaaccgc ttcacgcact ctggtgtatt gtgccgggct
    10621 gttttcatct aaatcacggt cgtaaagtgg taagtctgca atatccacaa tgtttaattg
    10681 aatgcttgca ggtgccattt tttgtaagtg acgaacagtc aagtgactaa atgaagtttt
    10741 gctgccgcta ccaattaata ctgcaatttg ttttgccatt ttataattcc ttagtacata
    10801 gagaatatag gcattttatc cctttcaatc tgtttcataa agcgcttatg atgaaaagca
    10861 ctatttactt atattaaata attttgcaaa ttttaggcca aatttgaccg cttttatctt
    10921 tagctaaaaa ggttataatt tgtagaaata gatcttaatt tagggttttt atgctttttc
    10981 taaacaaaat aaaacagctt ttcatcttcg cctttacgct agtgttatct gcttgcagtt
    11041 tggttgttta taagccagtt gaaacaatta aacaggtaaa tgttgaaaga ggttatcgac
    11101 aaaaaaatgt gatcgctgaa agtgcaaaag acggtaatat tgttgtcatc atgttttcag
    11161 gtggtggaac aagagcggcg gcgcttggtt atggagtgtt ggaagagttt aaaaaggtaa
    11221 gggtgaaaga aacaaataaa ggtaatactt tattagagaa tatagatatt gcctttggcg
    11281 tatcaggtgg atcgatatta gccacttatt ttgcgttgga aggaaaggat atcattccta
    11341 aatttgctga ccgtttttta aaagcgaact ttcaaaaaga tattattaca gaggtgtttt
    11401 cgttatccaa tcttcctcgt ttaagttctc ctcaatatgg gcgtggtgat ttattgcaag
    11461 aacgcttaaa ttttgccctt tatcatggta aaaagtttgg tgatttagtg aaaaatcgta
    11521 aaggaccttt tgctgtgatt agcgcaacag acatgaacat tggtcaaaaa ctgaccttta
    11581 cgcaagaaac ctttgatggg ctttgtttaa atttgaatga tttagaaatt tcccgtgctg
    11641 ttgctgcttc tagttctgtt cctctgattt ttgcgccgct tacactgaat aacaatggtg
    11701 gaaattgcca ttttagtatg ccacaagaat ttagtgctag agaaaaagca attgatggac
    11761 taattacaaa aaatattgaa gaaacgaatc atatactcag cctttatcaa gatagtaaag
    11821 aacgcccctt tatccattta gttgatggtg gattaacaga taatttaggg cttgccagtg
    11881 tgctggaaat atctgatgtt atgggtattg aagagatgta ccagtatatt catcagctta
    11941 gggtgaaaaa tattgtagtg attaatgtaa atgcgcaaaa tgaagtatct agcgagatcg
    12001 ataagaccgc aaatgtaccg ggggtggctg atgtagtgaa tacaatagtt aatgtgccaa
    12061 ttgatagaac gacacaaatt aatttacaac gttatcgcca gtttacagat ggttggaatg
    12121 aatatgcaaa taaacagcca tcaaagatcg aaatgcattt tgtcagttta ggtttaaaag
    12181 aattacctga tggtgattta aaaaaagatg tgctaaatat tgcaacatca ttttatttgc
    12241 cggaagagga tgtagataaa ttacgtgaag ctgctcgggt tttattgcag caatctcaag
    12301 aatataatgc ggcattaaaa acactgcagt agtaaaaaac cgaccaagcg gtcggttttt
    12361 ggtatttttt tgcaaatatt tattcgctga tgtcgtttaa atccaacaac tcttgcgaaa
    12421 gaataatgcc ggttaagtca gcataaacgt aatcttcggg gaagaaggtt acaccgccaa
    12481 aattcacagg cgtatccact tcgccaatgt cggtattatc tgctcccact ggaattggcg
    12541 ctaaagcatg aataccgata tctaatcttt ccaaaatatc taattggcga accgcaccat
    12601 aaacgatgat accttcccag ccgttatcta cagcaagttg agccagctct gcgtcaatta
    12661 aggcacgacg aaccgcaccg ccaccatcga ctaacagcac tcgcccttca ccctcttctt
    12721 ccaaaacttc agcaattaaa ccgttgcttt caaagcattt aaccgtggta atcttcccaa
    12781 agaaggaaga agcaccgcca aagcttgaga aaattggttc aaccacatca acttggtcag
    12841 aataaagatc gcaaagtgca gaggtatcaa tacgcataat atgctcctgt tcgtagatta
    12901 tttagctaaa gtataaacct tcgcccaaaa tttgcaaaat tttatcgaaa aaagaccgct
    12961 tacaggcttt tttcttatgc tttattttct agtgaaccgc ttttaatatg caattccatt
    13021 tggttgtaag gaatagatat acctgcttca ccaaaggcta attttacttg ttcgataatt
    13081 tcccaatatg ctgcccagta atttggtgtc tgaacccaag ggcgaacaac aagttgaaca
    13141 ctatgcggtg ctaaagcgcc gactgctact acaggtgccg gatcttttaa tacataagta
    13201 ttggcgtcta aaatgcgttg gataatctct ttcgcctctt ttaagttaga ttcataagaa
    13261 atatcaaagg tgaaatcaat acggcgtgtc gggttgttag agtagttgat gatgctgtca
    13321 gaaaacactt tgccgtttgg taataacacg gttttgttat cgccggtgcg aagttccaac
    13381 actaaaagcc ccatttgttc aaccacgccg gtcattccgc cggtttcgat taaatcccct
    13441 ttgcgaaatg gcttgaagat taacaacatc acgccggcag caaagttttg taatgagttt
    13501 tgtaatgata aaccgatggc taaaccggca gcaccgatta atgcgaccag cgagctggtg
    13561 ttaatgccga tttgtgaaag cgaggcaatc accacaatta acagcagtaa aaaatagctg
    13621 attgagacaa taaaactttg cagcatttca tctttggttg attttaatgc ggctttaccg
    13681 agtaaacggc taattaggcg ggcaagaaat ttcccgacta caaaaatcgc aatcgccagt
    13741 aaaattttgg tgccataagg gataatccac tcatttagca tagtttcaat attcatatta
    13801 ctgactttgt ggattacttt ttcggtttcg gcaaccacgt caatgtttgg agctgtttcg
    13861 gtgacttttt cagtcatatt gtttccttaa aattaaaatg aaaaataagc ctagcgaatt
    13921 tgcctcactc gctaagcggt tttgtgctag aatttagagc aaaattttct ctaaaagaca
    13981 agataatgac aacagaaaaa gtaattagtg ccggcgttca attttttacg atcagtgaag
    14041 atgaagccgg acagcgttta gataattttt tattggcaaa gctcaaaggc gtgccgaaaa
    14101 gtttgattta ccgcattgtg cgaaaaggcg aggtgcgggt gaataaagga cgaaacaaac
    14161 ccgaatataa attacagcct gatgatttag tgcgtgtgcc gccggtgcgt gtggcggaaa
    14221 aaaatgaagc cccaatttcg actaaattaa acaaagtggc ggagctggag agccaaattc
    14281 tgtatgaaga tgagtcaatg ctagtaatta acaaaccttc aggcattgca gtacacggtg
    14341 gcagtggttt aagttttggt gtgatcgaag ccttgcgtgc attacgtcca caggctcgtt
    14401 tcttggaatt ggtacaccgt atagaccgtg atacatcagg cattttgctg gtggcgaaaa
    14461 agcgttcggc gttacgttcc ttgcacgaac aactgcgtga aaaagtagta caaaaagact
    14521 atcttgccct tgtgcgaggg caatggcagg ctcataccaa agtgattaaa gctccattgc
    14581 taaaaaacga acttgccagc ggtgagcgaa ttgtacgggt gagtgaagag ggtaaaccgt
    14641 ccgaaacccg tttcagcatt gaagagcgtt atgccaatgc cactttggtg aaagcttcgc
    14701 ctattaccgg aagaacccac caaatccgtg tgcataccca atatgccgga cacccgattg
    14761 cgttagatga caaatatggt gatgcggaat ttgacagcaa aatgaaagaa gtgggcttac
    14821 agcgtttatt tctgcacgcc catgctattc gttttgaaca ccccaaaacc ggcgaagaaa
    14881 tggtcattac cgccccgctg gataaaactt taaaaggcgt attggcaaaa ttaagggcta
    14941 attactaaat aacttaatga gagagtaaga tagcgcaagc gtccacgctt gtgctgtaaa
    15001 tcaacataga gtggtacaag cgtggacgct tgcaccaaca aaatataagc aaaaatatgc
    15061 aaatccattt caaaaatttt caaaaaaatg accgcttgtt agatttaacc acaccgcaaa
    15121 ttatggggat cttaaacttc acgccggatt cattttccga ttcgggcaag tttttttccc
    15181 tcgataaagc cttgttccaa gcggaaaaaa tgttagctga tggggcaagc attattgata
    15241 ttggcggtga atccacccgc cctaatgcgg cgattgtgag cttagaacaa gaattagagc
    15301 gtgttgtgcc ggtggtggag gcgatccgca gccgttttga ttgcttgatt tcggttgata
    15361 gctccaaagc agaagtattc aaagagtcgg caaaagtcgg tatggatatc attaacgata
    15421 ttcgagcctt aaccgagccg aatgcgttgg cagcggcagt agaattgggc ttgccggttt
    15481 gtttaatgca tatgcaaggc aacccgcaaa caatgcaaca aaatccgcac tatgatgatg
    15541 tgttggaaga tgtggcagat ttcttaaatc aacggatttt cgagtgcatc accgcaggca
    15601 ttcccaaaga acacattatt ttagaccccg gttttggctt tggtaaaagc gtgaaacaca
    15661 attaccaatt attgaaacac cttaaagcct ttgtggattc aggcttccct gtgcttgccg
    15721 gactttcccg taaatcaatg attggtgcgg tgttagataa accggtagaa caacggctac
    15781 ttggctctgt agtaggggcg ttattagccg ctcaaaatgg ggcgaaaatt ttacgggtgc
    15841 acgatgtggc agaaaccgcc gatgcgttaa aaatctggca ggcaatgctg gaatcagata
    15901 atgaggaaaa atgatgacaa ccttagttta tggcattaaa aattgcgaca cagtaaaaaa
    15961 agccttgaaa tggctcgaag atcataatca aaacccacaa ctgcacgatt accgtgtgga
    16021 cggtttaaat gccgattggt tagtggaaat ggaagcaaaa ttcggttggg aaaacttagt
    16081 taataaacgt agcaccactt ggcgaaacct tgatgaggaa attaaaaaca accttaaccg
    16141 tgagtcggca ttaaaagtgc taaccgaaca gccgacccta attaaacgcc cgattgtgat
    16201 taaagaggat attgctttga ttggttttaa tgagaaagag tatgtggctg cgtttaatta
    16261 attttttccc ctgcttgtag ggacaggtcc tgtgcctgtc cgtagtcttt aggattgttc
    16321 gggcgggcac aggacccgcc cctacaggat atatagcaaa aaattcaccc aaaacaaccg
    16381 cttgtaacct atgaaaaatg aaattatttc ccttgcacag aacctaatcc gccgtgattc
    16441 catcagccca caagacaaag gctgtcagca agaaattgca caacgtcttg aaaaactggg
    16501 ctttaatatt gaatggttgc cgtttggcga caccttgaat ttatgggcaa cgcacggctc
    16561 ggaaaatggt aaaacagagc cttgcattgt gtttgccggg catacagatg tggtgccggt
    16621 aggcgatgaa agccaatggg cttatccgcc gttttcggct gagattgtag atggaatgct
    16681 ttatgggcga ggggcggcag atatgaaagg ctcgctctcg gcgttagttg tggcggcaga
    16741 aactttcgtg caacatcacc caaaccataa gggcaaagtg gcattattga ttacctccga
    16801 tgaagaggca gcagccaaag acggtacggt aaaagtggtt gaaaccttaa tggctcgcaa
    16861 tgaagcggta cattatgcgg tagtgggcga accgtctagt agcaaggtgt ttggcgatgt
    16921 gattaaaaac ggcagacgtg gttcaattac ggcagatctc tatatcgagg gcattcaagg
    16981 gcacgttgcc tatccacatt tggcggaaaa tccggtgcat acgtcactgg gttttttaac
    17041 cgagctgacc acttatcagt gggataacgg taacgaattt ttcccgccta ccagtttgca
    17101 aattgccaat atcaaagccg gcacaggcag taataatgtg attccgggcg agctttatgt
    17161 gcagtttaac ttacgttatt gcactgaagt gaccgatgaa atcatcaaag ccaaagtagc
    17221 ggaaatgctc gaaaaacacg gtttgaaata ccgaataagt tggaatttat caggcaaacc
    17281 attccttgcc ggcaatggaa aattggtcga agccgcctta caagcggtcg aaaatgtcac
    17341 aaaaattacg cctcgtttag acacaggtgg cggtacttcg gacggtcgtt ttattgcatt
    17401 aatgggggca gaggtagtgg aatttggacc actgaacgcc actattcaca aagtgaatga
    17461 gtgtgtgagt gcggatgatt tggcacattg tggcgaaatt tattatcaaa ttttagaaaa
    17521 attattggca actgcataac cctaaatagg cagaatgtta tcaaattgta ttctgcctat
    17581 tttttatgta gctattctgt taaacagcgt ttacactagc ggcagttttt atatttatag
    17641 gtaaatgtta tgcaactcta ctcttatatc tgcttgctgt ttgggcttgc gatgtttatt
    17701 tcgtttttta cccgaaaatt aaacgaaaat attcaaacca ctattgcaat tacagcctct
    17761 gcccttgtcg gctcccttct tattcttacc ttcggttctc tcggctggtt taatgttgat
    17821 aaacttgcca tttccatttt tgaacaactc gattttaaaa gcttcctgtt aaacggaatg
    17881 ctggggttct tgctttttgc cggttcactt gggattaaac taccattaat gaaagagcaa
    17941 cggcgggaaa ttgcagttta tgccttattt tcaaccttag tttctacttt cttgatcggt
    18001 gcgttaattt atggcgtggc aaggctactt gggttagagc tcggctttgt gtattgtttg
    18061 ctgtttggct cactgatttc gccaaccgac ccgattgccg tattggcaat tatcaaaagc
    18121 ctgaaagccc caaaacgcct ttcgatgcac gtggagggcg aatctctgtt taatgacggt
    18181 atcggcttgg tgatttttac cactatcttt gccgttgctt ttggcggaca agaaccaaac
    18241 cttagcggta ttaccggact gttcttgcaa gaagcggtag gcggtatcgt ttttggctta
    18301 ttaaccggtt ttgtggcaca taaatttatt tccgcaaccg atgacggaag ccttgaaatt
    18361 ttaattacgc taacgattcc aacagtcggc tttgtgattg caaactacct acacgtttca
    18421 ggggcattaa caatggtagt tgccggtatt atgattggca actggactcg ccgttccggt
    18481 ttctccgaac agagccaaaa atatcttgat cacttctggg agatgatcga ccattcatta
    18541 aactacctgt tattcctgct tatcggctta agtacactgt tagttgattt cacctttatt
    18601 ggtggggtgt taatgttggc agcaattcca atttgtttgc ttgcacgcta tatcagcctg
    18661 tggattccat accaagtgtt aaaacgtttc cgtacttata acccgtacac cttaaaaatt
    18721 atgacttggg gcggtttacg tggtggatta gcccttgcga tggcactttc cgtaccggca
    18781 ggggctgcgg tggtatcgag ctcagaaggc aatcttgatg tacgtgattt gattttgtta
    18841 atgacttatg cggtagtcac tttctcgatt ttagtacaag gttcaacggt tgaaccgatg
    18901 ataaaaaaat ccaagttggt agatccaaga aaagtggcac tcaataaatt aggtgcacct
    18961 gatgatgtaa ttccacatat ttaatagcat ttataactga ataacatatc attttgctaa
    19021 agattattag ccatctagac ggctttatat ttaaatacct ctcacgttaa tttgttgaga
    19081 ggtatttttt atgttattca caggattatt atgtggcttt ctactcgggt ttgtgatgca
    19141 aagagggcgt ttttgtatta ccggagcatt tcgtgatctc tatgtaacaa agaatagccg
    19201 tatgtttgtg gcacttttaa ttgcaattac ggtgcaatcg atcgggattt ggcttttgta
    19261 tgaagccggc tcttttagtt ctccggcgga agatttgcct ttgctcgcag tgatcattgg
    19321 ggcatttctg tttggtatcg gcattattta tgcaggcggt tgtgctacag gaacgtggta
    19381 tcgtgccggt gagggtttaa tcggcagttg ggttgcactg gttatttatg ggctgttttc
    19441 tgcttctatg cgaaccggtg tgttagcccc acttaatcaa gagctaaaaa gcaatgtaat
    19501 tcaacaccgc acgatttatg aaacatttgg tatttcccct tgggtgttag tgtttatcct
    19561 gagtgtaatt acattggcat tatccgccca cagcatttaa aaggttaatt ttttaaggag
    19621 taataaagat gaacgtacgt ttacctgcct cagggcttgt ttgcccgttt ccattagtcg
    19681 aagccaaagc ggcgatggca aaattgaata aaggcgatag cttaacgatt gaatttgact
    19741 gtactcaagc aaccgaagcc attccaaatt gggcggaaga ggaaggctat gaagttaccg
    19801 attaccaaca acttggtgat gccttgtggg aaattacggt ggttaagtaa ttagcaataa
    19861 aaaagctcta cttttttgta gagcttttgc tttgagtttt gtatttacta aggattagag
    19921 taaacccggt tgacctaatg ctgggtctgt tgctcttgca gcaatagcat cttcaaccgt
    19981 catacctaat gcttttgcca caccttcacc atatgccgga tcacaggcat agcagttacg
    20041 aatatgacgg tatttaatga agtctaatgc atcgcccata cctgcagcag tattattgaa
    20101 taatgcttgt ttttgttcat cattcatcat attgaacaat acacgtggtt ggctgaagta
    20161 gtcagcatcg tcttcacgat agttccagtg ggctgcatca ccattaattt tcagtggtgg
    20221 ctctgcatat tgagcttgtt cttgccattt gccgaagctg tttggttcgt agtgaatggt
    20281 actaccgtag ttaccgtcca cacgaccttg accgtcacga gcgttgctat gaaccgggca
    20341 acgtggagcg tttacaggga tttggtggtg gttcacacct aaacggtagc gttgagcatc
    20401 cgcatagttg aataaacgag cttgtaacat acggtctgga gacacgctga tgcccggcac
    20461 taagttactt ggtgcgaatg cagattgttc cacatcagca aagaagtttt cagggttacg
    20521 atttaattca aactcaccca cttcaattaa cggatagtct gatttcggcc ataccttagt
    20581 taaatcgaac gggtggtatg gtactttgtc tgcatcagtt tcaggcataa tttgaacaaa
    20641 cattttccat ttcgggaaat cgccacgctc aatcgcttcg tataaatcac gttggtgact
    20701 ttcacgatcg ttagcgataa tagcggctgc ttcttcgtta gttaagtttt taatgccttg
    20761 ttgtgtatgg aaatggaatt tcacccagaa acgctcatta gctgcattga tgaagctata
    20821 agtatgtgag ccataaccgt gcatatgacg atatgaagcc ggaataccac gttcactcat
    20881 tacaatagtc acttggtgaa atgcttctgg taataatgtc cagaaatccc agttgttagt
    20941 tgcagaacgc atattcgtgc gtgggtcacg tttaaccgct ttgtttaaat ccgggaattt
    21001 acgtgggtca cgtaagaaga acacaggggt gttgttaccc accatatccc agttaccttc
    21061 ttcggtatag aattttaatg cgaaaccacg aatatcacgc tcagcatctg ccgcaccacg
    21121 ttcacctgca acggtggtga aacgagcaaa catttcagtt tttttaccga cttggctaaa
    21181 aattgccgca cgagtgtatt tagtgatgtc gttagttaca gtgaaagtac cgaacgcacc
    21241 ggaaccttta gcgtgcatac gacgctcagg aatgacttca cgcacgaagt tcgctaattt
    21301 ttcatttaac cataaatctt gcgctaataa tggaccacgt ggacccgctg ttaagctgtt
    21361 ttggttatca acaacaggtg caccgttgtt cattgtcaaa tgtgtaacag gacatttaga
    21421 cataatagaa tcctcataaa ttagaaataa gataggtaat taatccgaag agaattatag
    21481 gtgttgtaga ttttttctca atctatcaat ttgataatta atgactatta aatattaatt
    21541 ttaaatagtt gattttaatt gtcaagtatt ctgagaaaga tgataagcgg tcatttttcc
    21601 actatttttt gcagtatgta ggtgtaaaaa ttaacggccg agaagtagat ttcaacaaag
    21661 aatagataat aaaaaagtac atatttaaga aatatgtact ttttatgatt ttatttgcct
    21721 aagttatcaa agaatttctt cacaccatca aagaaacctt cgtgtttcgg acgatgttta
    21781 ccttgtcctt ctaaactctc ttcaaattgt cgtaatagtg ctttctgttc ttcggttaaa
    21841 ttcacaggcg tttcgaccac cactttgcag attaaatccc ctgcgtagcc accacgaggg
    21901 cttgttaccc ctttgcctcg tacacggaat agtttaccgg tttgagtttc tgccggaatt
    21961 ttgagtttta atttgccgtc taaagttggc acttcaattt caccgcctaa agctgcaagg
    22021 gtaaagctaa tcggcacttc acagtataaa ttcgaaccgt cacgctcaaa aatatcgtgt
    22081 tctttaacgt gaatcaccac atataaatcg cctgccggtg cgccattttc gcctgcagct
    22141 ccctctctcg ataagcgaag ttgattaccg gtatccacac ctgccggaat ggtaacagag
    22201 aggtttttcg ctttctgtac acgtccatcg ccgtggcaag aacggcacgg tttttcaatg
    22261 cgtttacctg taccgtgaca acttggacaa actgcctcag tcacaaagaa accttgctga
    22321 cggcgaactc tgccggagcc gtgacaatgc gaacaggttt ccactttgct ccctgcttcc
    22381 gcccctgtac catgacaagt atcacattca gctaaggttt gaatgcgaat atctttttta
    22441 cagcctttca cagcttcttc aagggtgatc tcgatgtcgt aacgtaaatc atcgccacgt
    22501 accacacgtt ggcgacgtcc accgccacca aagccaccgc caaacatttc gctgaagatg
    22561 tcttcaaaac caccgaaacc accgccgcca aagccaccga atccgcctgc accggcaccg
    22621 ccttgttcaa aggcggcgtg accgtattgg tcgtacatcg cttttttctc gctgtcggtc
    22681 agcacgtcat aggcttcggt aatctcttta aatttctctt ccgactcttt actgccttgg
    22741 tttttatccg ggtgatgctt tgccgccaaa cgtttatatg ctcgtttgat gtctttctcg
    22801 cttgcccctt tagacagtcc aaggacttcg taataatctt tctttgccat tgttgttccg
    22861 tttgtaaatt tttctgtgtt tttgaccgct tgccctcgcc ccttgtggga gaggggtagg
    22921 atggttaatt ccccctctct ctgaaaaata tttctgaacg aaatattttt cggtctctct
    22981 cccacaaggg gagagagttt tatataatta aatgggatct agccaagatg gctcaagatg
    23041 acacaagcgt ggacgcttgc gctatcaaaa gcctaacaat gcggattcac cgcaatataa
    23101 atttctactt tgccgtctgc taaatgtttt tcaaaatctt tggtgtaagc tcgtttgagc
    23161 aaaccttgtt tggaacggtt ttcaatcaca gaccaagtgt ctgccaaaag agcttcggta
    23221 gttggaattt gctcaaacca aacaaaatcg tccattaaaa tcgcggtatt gctgttttcc
    23281 gtttctgtgg caatgaccgt ttcgccactt ttatgatcgt atattttata aaacggtggc
    23341 tgtacatttt ccgttgtagg gtagagtttt agcatttgta aaatttcctt tgaaaagcac
    23401 cgcttgcaca gccccaaagg ggctgaatta tgtgtaacct agcacggctc gtgctaggtg
    23461 gtatatatct acacaaaagg ggcgaaagat atttcgcccc tacaagttac gcaagattat
    23521 ttattatctt tcacttcttc aaattccgca tcgaccacgc cgtcatcttt ttgagattgt
    23581 tgtggttgct cgccgccttg tgcttttgct tgtgctgctt gcattaacgg ttctgaagct
    23641 ttgattaacg cttcgatttt cgcttcgatc tcggctttat cttcgccttt agctgcggtt
    23701 tctaactcag aaatagccgc ttcgatcttc gctttatcgt ctgcgtttaa cgcatcgcct
    23761 gcttcggtaa tttgcttacg ggttgcgtga gcaataccgt ctgcttggtt acgagcttga
    23821 actaactctt caaatttttt gtctgcttcc gcattcgctt ctgcatcacg caccatttgt
    23881 tcaacttcag catcgcttaa gcctgaagat gcttgaattt tgatttgttg ctctttgcca
    23941 gtgtttttat cttttgcaga gacattgata ataccgttag catcaatatc aaaggttact
    24001 tcaatttgtg gcataccgcg tggagcaggg ttaatacctt caaggttgaa ttgacctaaa
    24061 gatttattat ccgctgcacg tttacgctca ccttgtaaca cgtggatagt taccgcagat
    24121 tggttatctt ccgctgttga gaacacttgt gatttcttgg ttggaatcgt agtgtttttc
    24181 tcaattaagg tagtcattac accacccatt gtttcgatac caagtgaaag cggagtaacg
    24241 tctaataaca atacgtctgt taccgaacca cttaacacac cgccttgaac cgccgcaccg
    24301 attgccacag cttcgtccgg gttaacgtct ttacgcggtt ctttgccaaa gaagtctgcc
    24361 acttttttct gtactaacgg catacgggtt tgaccaccga ctaaaatcac atcgttgatg
    24421 tcgcctactg ataaaccggc atcagctaaa gcggttttta acggctctaa cgaacggttt
    24481 actaaatctt caactaaaga ttccaatttc gcacgggtta ctttaatgtt taagtgtttc
    24541 gggccggttg catctgccgt gatgtatgga aggttcactt cagtttcttg tgcagaagaa
    24601 agttcgattt tcgctttttc cgctgcttct ttcacacgtt gcattgccat tgggtcgttg
    24661 cgtaaatcaa cgccttgttc tttttggaat tcttccacta agtagttgat tacacggtta
    24721 tcgaagtctt caccacctag gtgagtatcg ccgttggttg cacgcacttc aaaagtttgc
    24781 tcgccgtcaa agttatcaat ttcgataatc gaaatatcga atgtaccacc acctaagtcg
    24841 taaacagcaa tcgtttggtt ctctttctta gaatctaaac cataagcaag cgctgccgct
    24901 gttggttcgt tgatgatacg ttttacatct aaacctgcaa tacgaccggc atctttagtt
    24961 gcctgacgtt gtgcatcgtt aaagtatgca ggcacagtaa taaccgcttc ggttaccggt
    25021 tcgcccaaga aatcttctgc ggttttcttc atttttttca agatttcagc agagatttgc
    25081 ggcggtgcta atttatcgcc ttttacggtt acccacgcat cgccgttatc tgctttgctg
    25141 atttcaaacg gcataatttc aatatcacgt tgcacttcag catcagtaaa acgacggccg
    25201 attaaacgct tgattgcaaa taaagtattt ttcgggttag taattgcctg acgttttgcc
    25261 ggctgaccaa ctaaggtttc tttatcggtg taagcgatga tagatggcgt tgttcttgcc
    25321 ccttccgcat tttcaattac acgaggtttg tcgccgtcca ttaccgcaac acaagaattt
    25381 gttgtaccta agtcaatacc aatgatttta cccattttta tgattcctat aataataaat
    25441 tcagtttgaa taagaaacgg gattgcattt cccgttcaga cgaaatcata aatagggacg
    25501 aaaatgcact gttcaagggc aaaaataaaa aaattgcaaa atttttggaa aaagtaaccg
    25561 cttgtatgtg ggggagattt ggcagaatat ttcacggaga aaatacctcc taccttgcat
    25621 acccctcaat agctttttat acttacggca actcaaacag agaaggatat aatatgaaac
    25681 tgattactac cattatccaa ccttcaaaat tagaccaagt gcaagatgca ctttcagaaa
    25741 tcggtattca aggaatgact attaccgaag taaaaggctt tggacgccaa tatgggcata
    25801 ccgaacaaga gcttagccaa atgagccgca ttgactttcg tcctaaaatt aaggtggaga
    25861 tattggtttc taattaccaa accgatgaag tgatcgatgc cattctcaat gcatcctatt
    25921 ctgggcaagt gggtgatggc aaaatttatg tagcgaatat tgaacaagtt atccgcaccc
    25981 gtaccggcga aactgacgat gaagcagtct agccattgct agcagagaag ctttttatta
    26041 tcgtgtttta gagttatatt ttcaacctta ctaaagcaaa ttttctaatt tggtgtgaat
    26101 taaatgtttg ttttttgtgt aatacgggtt attatagtaa tcaaaaatag ttaggtttta
    26161 atggaaatag acattctttg ttatgctaaa taaacacatt aataaaatta tcaattcttc
    26221 attttctctt gcatttttta cattaactag ttttgctacc gcttactgtt acggttgggg
    26281 acaagccata tttcatggct acccttggtg gcatgttgaa atcggcaatg ccagtatggc
    26341 aagaagtttg gcttatgtat tcggtacttc cgtcatctta ttcttgtgtt atgcactagg
    26401 ttatagttta ctaaataaag tttttcagct gcattatttc cgaaatctag gttggttaag
    26461 ggtgattgtg ttggtttctg tgtttacagt gcctgttatt cttacttttt acttatttac
    26521 cgggatagtg cccatttata tctcttttat ctatattttt gtaagtggtg tgagcgtatt
    26581 cttcttccgc aagagatgga ataataccaa gtttgatctg gactttagaa agatgctatt
    26641 aggaggaagt tttgccctgt ttaacatctt tatttttctc tatttcagtt tgctctcatt
    26701 gcatattggt tatttgcgtg ccggactaag aactacctat gattacatcg aaatagagaa
    26761 tcaaaaatac tacatattat ccaccaacag tgataacggc tacattatgg gaacaaaaat
    26821 aagaggtaat caatctttct tgtttttcaa tcgtgatact catcaatact accatgttca
    26881 tattgaacaa tgtacggata gccgattatg caaagtaata gtttgaggta attatggcat
    26941 tacaccgttg tccggagtgt cgaaagcgta ttagcgacag tttagaacat tgcatacatt
    27001 gtggcttctc gtttaaagaa gccgatttag cgatatatcg gcaaaagtta gaacagcgcc
    27061 gattacacaa ccaggagatc aaccgcaaaa gcgtaaaatt acaacttatt tggttagtta
    27121 tttttattgc ggtaattgct ctcgcaagtt ggataaccaa ttgaaataaa agcccggtat
    27181 ttaccgggtt tttttatacc taaagagaat aacaaaataa aaaagaacat aattctcgat
    27241 taaaactgga gtaaatattc aatattataa gatttttcat aaaaaataag ggataaaaac
    27301 cagtgataac cttattgtta atatggtttt tgttgcatgt tggttaatta aaaaataggt
    27361 agaatgttaa taattttctg tttggtattt atttgtaaat taagtatatt tactgtgtat
    27421 ttgtttgatt tataaggggt tttgttaatt ttattatctt gataataaga gaattgtaaa
    27481 gaagtgaaaa gcttgtttca cttttgaagt gaaaatctta ctattatcga tatgactttc
    27541 ctcttactaa attaagagta gtaaggttgt ttattcggtg ggttgtaatt gccgaattat
    27601 ttacgaagta agctttataa taattctaaa ggtataaaat tatgaacaaa atatttaagg
    27661 ttatttttaa ccaaacgacg caaaaaatgg aagttgtgtc tgaacttgct cgatcgcaag
    27721 gtaaagccgc ttcttctact gataagcgcg gtactattaa attagcagcg gctagcattc
    27781 tagggggagc aacccttatc agtggaatgg cagcctttat gctttctgct acaccggcag
    27841 aagcggcggt gattattgat agaatagaag tacaacaaaa agcaccaaaa aaagttgtta
    27901 atggtggtat agatatttat acaaacacta gtttggctac agattctatt acgaatccat
    27961 ataactactt taacccaggt agcttatcct atgcagacag aactaagctt caagaatcta
    28021 ataactctgt taataaggag aaggattcta gattattgta taagtctaat actacctcag
    28081 caattgtaat tggacacaat gctgtagctt tagacaataa cagaaaaagt agaggaaaac
    28141 cgaaagcgtc aggcatagcc attggtgatt attcatattc tggaggggga ttgtctattg
    28201 caattggttc tttttctcgt actgcaagta ttggttctgt agcattaggt acctctgcac
    28261 gtgcggaagg atttaactca tttgctgcaa tgcgtcaatc tgctgcaatt gcagattatt
    28321 ctactgcaat tggttcaaca tcttgggcaa atgctacagc tagcttcgcc attggtgctt
    28381 cggctacagc gctaggtgac cgttcttttg cgattggtag tggtactcca cagacagtgg
    28441 atggaagtta cggtcatgaa aatagacgtt caatttatga tgggcaaaat aatactttag
    28501 catttggaac agatgcattc tcaatcggta ctaaagcgaa aactaatggt aaccattcat
    28561 ttgccattgg tactaacgct tggtccggtg gctttaaatt agagaattca aatatttctg
    28621 aattaggaca ggtaattaat cctgatacag cgaaagtagc aaataatgca tttgctttgg
    28681 gtacgaatac tcgtgcaaat tcgaatgata ctttggcgtt ttcaacaaat gcaagtgcaa
    28741 caggtgatgg ttctatcgcc tttggtgtaa attcgaatac aacaggaatc ggtgcgattg
    28801 cttttggtaa tgcttctaaa gcctggaaaa gtaatgctat tagcattggt tggaatgcaa
    28861 actctcatgc agaaaaagtg atcagtattg gttcgcattc taacgcgagc aaagatggtg
    28921 caatggcaat tggtgatacg gctaattcaa gtggtaataa ttctgttgcg ataggttata
    28981 gtgctaatgt aagtaaggcg aatgcgacag cagtaggtac acgtgccaat attacgcatg
    29041 aaggtggcac agcaattggt tttgaggcca aatcaaaagg taattatgca actgctattg
    29101 cttacaactc aaccgcaaag ggtaaaaact caattgcagc cggtgtaaat agtactgttt
    29161 cgggtattcg tgctgcggct ttaggttata acaatacagt ttcaggtaaa gatactttcg
    29221 tattaggttc taatgttact gttaagacaa agggttctgt aattctaggt tctgactcta
    29281 ctgaagcaac cgcaactaaa gaagatactg caactgttgg cacattaaaa tatagcagct
    29341 ttgctggcga tgaaaatgtt gttgatggtg attatgtgag tgtgggtaat gcaaccaatg
    29401 ctcgccaaat taagtttgtt gcaccgggta aaattgcttc caattcaaca gatgcgatta
    29461 acggttcaca actttacgca gtagctgaca ctttagttaa aactggcttt aacattacag
    29521 cggatcactc tggcttagga ggtggtgcta aagaagacaa tgtgaagtta ggtgaaactg
    29581 ttaagtacac ctcaaccgat aagaatgttg ttacaaccgt aacaaataat accatcgatt
    29641 ttggcttatc cgataacatc tctgttggtg gtaaaccagg taaagatggt tcagttggtg
    29701 ttaaaggtgc tgatggtaaa gatggtgtaa caattaaacc agaagccatc gtattccacg
    29761 gcgttgatgg cgtaaatgga aaagatggaa aagatggtaa agcatcaatt aaagttgaga
    29821 aaggtgctaa aggtcttgac ggcaacgacg gtaaagacgg cgaaagcaaa actcgtattg
    29881 tttacgaaaa accaaatggt gataaagaag aagttgcaac acttaacgat ggcttaaaat
    29941 tcggtgcgaa tgatggcaaa gttcacgatg cgaaattaaa tacgcaggtg gatattaaag
    30001 gtgctacaac aaacactgat tgggctaagt ttgatgctgg taaaaatatc atgacacagg
    30061 ttgttggcaa taccattact gtggcgttag caaaagatct agcaggctta gatagtgcaa
    30121 cattcggcac acaaggtgat tctacagtta tcaataaaga tggtgtaacg attgctaaga
    30181 aagatcctaa tgatgcaact aaatctaatg ttaccttaac agaggatggc ttaagcaacg
    30241 gtggtaacca aatcaccaat gttgatagcg gcttaaaagg taaagatggt caacctgtta
    30301 aacttactga ggcagcaggt gatgttctta acaatgcggt taacgtcggt gacttgaaaa
    30361 atactgttac tgagactgtt actgaggtga caacagatgc gtttggtcta aaagatgaga
    30421 acaacaagga gtttaagcaa aacttaggta cgacagctaa gatcattggt gatggcaatg
    30481 ttaaaacaaa cgttgttgag aaagatggtg gccatgcatt agaagttagc ctagtgaata
    30541 atattactgt tggtaaagat ggtgaaccag gtaaagttgg tattgctggt aaagacggta
    30601 aagatgctat tgctttagat ggtaaagatg gagctatcac tgtaggtcgc cctggcaaag
    30661 atggtattga tggtactatc ggtgtaaacg gtaaagacgg ttctgcagtt gttcttaacg
    30721 gtaaagatgg ttcaatcggc ttgaacggta caaatggtaa agatggttta accattaaag
    30781 gtactgaggg caaaccaggg cttgttggta aagatggttt accaggtaaa gatggtgtaa
    30841 ctcgtatcca atatcagcca acagatggca atggtgatcc tataggtgaa ccagagcaag
    30901 tagctacttt aaatgatggt ttacacttta aaggtgatga tgcaacacta gtatctaaga
    30961 aattgaatga aaccttagaa atcattggtg gagctgataa agataagcta actgcaaata
    31021 acatcggcgt aaacagcaaa gatggtaaat tatctgttca attagctaaa gatcttaaag
    31081 acttgaactc agctacattc aaaccacaag atggagagaa tggtcaagaa ggtaaaggtc
    31141 caacaacagt agtaaataat aatggcgtaa ctatcacgcc aaaagatggc acagatggta
    31201 aagcagttaa gcttactgaa gacggtctag acaatggcgg caaccaaatt gttaacgtga
    31261 agagcggtat tgacggttta gcaggtaaag acggcattaa cggtaaagat ggtaagccaa
    31321 tcacttcagt gaacgactta acagacgatc aattaaaaga agttggtact aacgctgcga
    31381 atattaatga tgttgtaaat gcaagcaacg atattatcga gaaaggcttt agcattgcag
    31441 cggataatgg tgaaactgat cacgttaaac taggtgaaac tgttaagtac acctctaaag
    31501 acaaaaacat catcacaaca gtaagtgata atgtgattga ctttacgtta aataacgatt
    31561 ttaccattgg cggtccaggt aaagatggtt caatcggtgt taaaggtgca gatggtacag
    31621 ttggtgttac tttaaacggt aaagatggct ctatcggctt aaccggtccg aaaggcgctg
    31681 acggtaaaga tggtgcaagt gcaactatct ctgtaaaaga cggtgctaaa ggccttgacg
    31741 gtaacgacgg taaagatggc gaaagcaaaa cccgtatcgt ttatgagaaa ccagacggta
    31801 caactgagga agttgcaaca ctgaacgatg gcttaagatt cgtaggtgat gacggtaaag
    31861 aaatcgttaa gaaacttaat gagacgttaa aaatctcagg cggtgatact gatttaacga
    31921 acctgtccga taacaatatc ggtgttgtaa acaacaatgg tgcgttaaca gttaaattag
    31981 cgaaagacat tgatttaacg aaagatggtt ctgtaactat tggtgatact acggtaaata
    32041 atgatggttt aactatcaaa gatggcccaa gtgtaactaa agccggtatc aatgcaggcg
    32101 ataagaaaat cattaacgtt caagacggtg aaatttctgc aaccagcaaa gatgcggtaa
    32161 atggtagcca gttatatcaa gtgcaagaag ttgctaacgc aggttggaac ttaacagcaa
    32221 atggtaaaga caaaggcaac gttaaaccag gagcaacagt tgatctaaac aacaaagacg
    32281 gtaacattat tattactaaa gaaggtaata acgtgacctt cggcttgaaa aacaacttaa
    32341 ccattggtgg taaagatggt aaagacggtc aaatcggtat tgctggcaaa gacggtaaag
    32401 atggcgtaac cattaaaggt gacggcacaa ttactgcagg ccgtgacggt aaagacggtg
    32461 ttgatggttc aattggagct acaggtaaag atggcgcttc tgttgtatta aacggtaaag
    32521 atggctctat cggcttaacc ggtccgaaag gcgctgacgg taaagatggt gcaagtgcaa
    32581 atattgcagt gaaagatggt gctgaaggtg ttgatggtac aaatggtaaa gatggattac
    32641 cgggtgagaa cggtaagact cgtatcgttt atgagaccaa agataaagac ggtaaaactg
    32701 tcacagaaca agttgcaacc ttaaatgatg gtttaatctt ctctggtaac aatgaagatg
    32761 tgaagaaccg tcagaaactg aatactgaag ttaaagtgaa aggtgaaggt gtggataaaa
    32821 cagcttctga aaactttaag tcagcatcag gcaacatcaa tgtgaaagcg aatggtacag
    32881 acacattaga ggtacaatta gcgaaagcaa ttgatttaac ggaagatggt tctgtaacaa
    32941 ctggcgacac aaccgtaaat aacaatggtt taaccattaa agacggccca agtgtaacta
    33001 aaggcggtat tgatgcgaaa ggcacgaaga tcactaacgt taaagatggt gatgtaacgg
    33061 caacaagtaa agatgttgtg agcggtagcc agttgtataa tgcaatgcag aatacaggct
    33121 ggtatctcac tgttgatggt aatgtagctg aaacttcaga gaaaggtgct caacgtgtta
    33181 ataacaatgg taaagtggcc gtttcaggtg gcaaaaacat cgttgtttca cgtaaaggtt
    33241 caactgttga agtggcaacc tcaagcaatc ttgaatttga ttcagtgaaa gttggtggta
    33301 caactatcag ttcaactgtt gcaaaagatg gcgtaaatga gcttaacatt gcaggtagca
    33361 agaatgcgca aacacatatt acgaacgttg ctccgggtgt gaaaggcact gatgctgtta
    33421 atgtgaatca gttgaaaggt gcagaaaatc gtctgaacaa tcgtatcagt aacgtagata
    33481 aagacttacg tgcaggtatt gcaggtgcat tagccgcagg taatttatat cacgtaacac
    33541 aacctggtaa atcgatggtt tcagccggtg taggtgctta ccgtggtcaa ggagctattg
    33601 ctgtaggtta ttctcgttta tcagataatg gtaaagtggg tatcaaattc agtgttaact
    33661 ctaacagccg tggtgataca ggtgctgctg caagcgtagg ttatcagtgg tagtaactgc
    33721 ttgattaagc ttttcttccc cacttttggg gaagaataaa taaaatcctt caaatagaac
    33781 ggggaaatct ggtttatttg agggattttt ttattggcta aattggattt aatggataaa
    33841 acaagcggtc aattctttac acttttttgc aaaaaaacgt aaagaattga ccgcttgcat
    33901 aatttaaata taacttactc agaagtgaga ttaattaccc ccattttgcc agctcaatat
    33961 attcggctag atccggaaat tgtttcaccc atttgttcca ttgcacttcg ttaatttcaa
    34021 tagagataat ccgttcaccg aactcattaa aatgctcggt tttaatgcag ttttctgctt
    34081 taaattgtgc gtaaattgca ccggcagtaa ccgggaggag caagttttca cacactaagt
    34141 tactgcgaag cctttcttga atggcttgga ataacagctc aatgccgcta ttttcttggg
    34201 cggaaagata cacggcaact ggcgtgccat cggcattgcg ttcaatatgc ggttctacac
    34261 cttctaattt atcaatttta ttgaatacca ataaagtagg aatatctaac gctccgattt
    34321 cgtccaacac ttgatttacc gcatcaatat tttcgttttt gcgttcgtct gagccgtcaa
    34381 tgacgtggag cagtaaagta gcttcggtgg tttcttgcag ggtagattta aaggctgaaa
    34441 ctaaatcgtg cggtagaaaa cggataaaac ctaccgtatc ggcaagaatt gtcgtgccga
    34501 catcttgcac ctgaatccgg cgtaaagtcg ggtcaagggt cgcaaaaagt tgatcggcag
    34561 cataaacacc agcttgggta atcgcattaa acagggtaga tttgccggca ttggtatagc
    34621 ccactaagga tactgttgga atatcggctt tttgtctggt ttttcgattt tgattgcgtt
    34681 gcttgctgac tttttccaag cggttgagta actgttggat tcgcacttta atcaaacggc
    34741 gatcggtttc gagctgtgtt tcacctggac cacgcaagcc aactgctccg cctttttgtt
    34801 ggtcttgatt agtaactcgg cgaaccaaac gggtcgataa atggcgaagt tgtgccagct
    34861 cgacttgtag tttgccttcg tgcgatcttg cccgttgagc gaaaatatcc aaaatcaagc
    34921 cggttctatc caccacacgg cagccgcata acgattgcaa attacgggtc tgagccgggc
    34981 taagttgatg gttcaccagc actactgttg ccccgagtcg ttctaccgct tcggcaattc
    35041 cctccgcttt gccttgcccc acataatatt tgatatgcga actttggcgg ctggtggtaa
    35101 gcgttgccag cacttcgaca ccggcagatt ctgccagcgt tttaaattcc agcaaatttt
    35161 caacatcttt atgttgcccg agatagagat gcaccaaaat ggctttatct tgattttctg
    35221 gatcggtagg cgaggcggct tctgtagttt ggcttgcttc agataaagca aagccaaacg
    35281 cagaattttc ttctgagttt ggcaatgatt cgtttaacat tggttgagta ataatgttat
    35341 tattccgctt gttcagttac ttcggcagca ggctgagcgt gttgggcttg gttgttattg
    35401 ttatgcgata acgcacgggc aggaacaacc gttgaaatag cgtgtttata caccatttgg
    35461 cttacagtgt tttttaataa aatcacaaat tggtcgaacg actcgatctg accttgtaat
    35521 ttaatgccgt taactaaata aattgaaaca ggaatacgct cacgacgaag tgcattcaaa
    35581 tatggatctt gtaaagattg accttttgcc attgttattt tcctttttat agttgtgtga
    35641 tttttaagac accaaataat gcgataagtg ccaaaggcgt ttagatatta tcacaattct
    35701 ttaaataatg atcgatcttt tccaccattt ttgctttaga actggtcgga gctaaactat
    35761 ctaaccaagt cagttcgcct tgccagccac gcagccaagt aatctgccgt tttgccagct
    35821 ggcgggtggc acaaatgcct ttaaagatcg cctcatcgag cgaaatatcg ccttgcaaat
    35881 attcccacat ttggcggtag cccacacagc gaatcgaggg caaattaata tgcaaatctt
    35941 tgcgtaaaaa taaccgcttg acctcctctt caaagcctag ctcaatcatt ttgtgaaagc
    36001 gttgttcaat ccgttggtgt agaactgcac gatcttgagg agcgattgca aattgtaaga
    36061 tattataagg tagagcctca ccttgctgag cagtgagttc ggtcatcgtt ttgccggtaa
    36121 tgtaaaaaac ttctaacgct cggttgatcc gttggctgtc atttgggtta attcttgcac
    36181 cggcaatcgg gtcgattttc actaattctt gatgcaatgt tgcccagccg tgttgtgccg
    36241 ctcggctttc gatttcagcc cgaatggctg gatcggcaga gggcagggga gataaccctt
    36301 caagcaatgc cttgtaataa agcattgtgc cacccaccaa gagcggaatt ttaccctgtg
    36361 aggtaatatc tgccatttca cgcaacgcat cagcgtggaa attcatcgcc gaatagctct
    36421 cggcagggtc taaaatatca atcaagcgat gcggtgcaag ggcaagctct tccttgcttg
    36481 gctttgccgt gccaatatcc attcctttgt aaattaaggc agaatcaaca ctgattacct
    36541 caaccggcaa ttcttggcgt aaagcaatag ctaaatcggt tttcccggag gcagtcggcc
    36601 ccattaaaaa aagggcaagg ggttttttat tcatattaat atactgtata tagatacaaa
    36661 aaaagccgtg aaattcacag cttttttgtt acaatcctga ttgtgctact ggtaggctcg
    36721 ttagggctat tcgcagtagc ctgagcctaa atcatcctta gtagcactaa ggaggcttac
    36781 aatgaaagaa ctactattga ttttagttgc acttgggttt ctgtgtgcag cagttgaaat
    36841 tttcacgctc tttcaactaa tctatctgtt cttgtaagcg gctagatgct aggggcgggt
    36901 tcgtgttccg cccagacttc tttatattac cttgatttct tgagtaactc aatgatttct
    36961 tgtaacgagc taattttaac tattcatttc ttttctttga atttcttttt tattgcacaa
    37021 ttttttgtta aatgttattt tgtatatcat ttgatataca aaaggagttt ttgatggcaa
    37081 atagtgcatt agtaagcgta agaatcagcc ctgaaattaa agagcaagca agtgaggtgt
    37141 tagccggtat cggcttgact gtctctgatg tgatgcgaat gacattagcg aaaatcgcaa
    37201 cagaaaaacg ttttcagttt gattatcagc ctaattttga gacagcagaa gtattaaggg
    37261 ctgttaagaa tggcgaggaa aagctacatt cagcaaatag tattgcggat ttaatggagc
    37321 aactcaatgc gagagattga gtatagtaat gcttttaaac gtgactataa aaaatgtgcg
    37381 gttgagtctt tatcctcttc attaattgag gcgttgtatt ttctgattaa tgacaagcca
    37441 ttacctgaga aatactgcga tcacgcttta accggcgaat ggaaaggctt tagggattgc
    37501 catatccaac ctgatttggt tcttatctat cgaaaagtgg aagatgataa gctagagctg
    37561 ctgcgaattg gcagccactc tcatttattt ggctaaaggg tattgccctt tagactataa
    37621 aaacttggaa aaatccactt ccttccttat tccctccagc tcttttttcc cattggcata
    37681 aagctcaatt tctgagagta gagcaatcac gtcacttagc gtacaagcgg tgggtttttc
    37741 gcattttttt gcaaaaaatt cggctaaatt gaccgcttgt gtttggttga acagagcaaa
    37801 taaaagctgt tgcaggtttt gttctctgac agcctgtggt acggaaagca ctgtgagccg
    37861 tgtttgggct tgccactgtt tttcgctgat cgaaaagcca agcttagtta gttcttcttt
    37921 ggtttgttgc cagcgttcgg tttgttgttg atctaaactg agattcagtg ggatcaacaa
    37981 cgcttgagat tgcccttttt ccagttgtag cttgagttta agctcggcta atgttgccag
    38041 tggaagcagg taaaaatttt cctcttcttt aattaacacc gcttggtttt ttacaatcgc
    38101 taaggcttgt gaatggtggc ttgcaagcgg tgcaatttgc gtaatttttt gcgaaacggc
    38161 ttctgtttta tgttcagttt ggggttctgt ttttggctca acaagcgtgc tttgcgtttt
    38221 gatagttggc gttgtttggt gcaaatcgcc accaaccaat tccttatacc atttttgagc
    38281 ggacgaactc acactgttgc ttcgttcaaa tttaggcgta tagcttgatc gacttgcatt
    38341 tttttgcgta aattcggccg cttgtggagc ggtttgcgac acaaaaatat tttgccccgc
    38401 agcttggcgg ttagtgtctt gaacatagct cggtaacggc tcgttcactt catttcgcag
    38461 ttcaagcgta ggttgggttt gttgcaggct gttgagtacg ccttgcaaaa taaagtcgtg
    38521 taccagtctt ccttgatgaa agcgcacctc gtgtttagcc gggtgaacgt ttacatcaac
    38581 cattgtcgga tctaaatcca aaaagatcac aaaagccgga tagtaaccac ttgcaatgct
    38641 gtcgccgtag gcttggcgaa tggcgtgatt gatggtttta tcccgcatca ttcgcccgtt
    38701 cacatagctg tagcaaaggt cgttttgcag acgggcaaga gccggtgagc caacccagcc
    38761 gtgtaggtgc agatccccgt gttgcctgtc aatataagtt gaatgttgaa taaactcatc
    38821 accgcaaatg gctgcaaccc gtttttgttg ctgctctacc gaattgtctt gcactttgcg
    38881 atattggcgg acgattttac cattatggct taagctgaaa ctgatattcg gcttggcaag
    38941 ggcaatgcgg cgaaccacct cgtcaatatg ggcaaattcg gttttatcgg tgcgtagaaa
    39001 tttacgccgt gccggtgtgt taaaaaacag atttgctact tcaatggttg tgccaatcgg
    39061 gtgtgaggca ggctgaattt ccaccgccat ttcccgccct tgtgcatagg cttgccatgc
    39121 ttcggtttgc tctgcggtac gagaggtcag tgttaaacgt gaaaccgagc tgatacttgc
    39181 caatgcttcg ccccgaaagc ctaaacttaa aatggcttct aaatcttcca agctgctgat
    39241 tttgctcgta gcgtggcgag caagtgccag cggtaaatct tgcttgctga taccacaacc
    39301 gttatctcga atgcggataa gctgagagcc gcctttttca atgtcgattt gaatagtatt
    39361 ggctccggca tctaaactgt tttccactag ctcctttacc acagacgcag ggcgttccac
    39421 cacctcgccg gcagcaattt ggtttgccag ttgaggcgga agaatgtgga ttagctgttt
    39481 aggggtagtg tttatcattt tgtttaagtt ttatctgttt ttacccctct ctctgcctac
    39541 agattctgaa cgaatctgta ggcggtctct ctcccacaag gggagagagt taaattctac
    39601 cctctcccct tgtaggagag ggatagattt ttctccgttc aggagaaaaa tcagggagag
    39661 gggaattgcg taatgtttta aaattccccc attttatcca attttcttgg cttttgcata
    39721 tttcttcaca taaaagaacg tgttagatta tggagaatat tgattaaatg agacctaatt
    39781 tatgcagatg atagaacttg cccagcaagc caaacaagct agttttgagc tggctcaatt
    39841 tggcaaccta cagaaaaacc aagccttact cacgattgcc gatagccttg agcaacgtgc
    39901 agaagaaatt ttatacgcta atgccaaaga tattgaattt gctcaagcac aagggatttc
    39961 attggcgatt attgaccgct tattattgaa tgaagatcgg ctaaaagaca ttgctaacga
    40021 tgtgcgaaat gttgccaaat tagcggatcc ggtggggcag gtgatggacg gtggcgtgtt
    40081 agacagcggt ttgaaaatcg aacgccagcg tgtgccgctc ggggtgattt taaccattta
    40141 cgaagctcgc ccgaatgtga ccattgatgt ggcatcatta tgcctaaaaa ccggcaatgc
    40201 agtgattttg cgtggcggta aagagaccaa atttaccaat gctgtgttgg ttgatgtagt
    40261 gcaagatgcg ttagaaaaag ccggcttgcc gaaattggca gtgcaagcgg tgacggatcc
    40321 ggatcgagcc ttattattgg aactattgaa gctagatcgc tacattgata tggtgatccc
    40381 tcgaggcggt gcaggtttac atcaattctg taaagaaaat tcgaccattc cggtgattgt
    40441 gggggggatt ggggtttgtc atctgtttgt ggaaaaaaca gcggatcagg agaaatctct
    40501 agaggtcatc gctaatgcca aaacgcaacg cccaagcact tgcaatacgc tggaaacgct
    40561 gttggtggaa aaagcgattg cggtggaatt tttgccgaaa ttggtcgcca aaatgcaaca
    40621 gcttggcgtt actattcaca gtaacgattt gcaaaaaatt gaaggaattg aaccgcttga
    40681 tcaagcaaaa ttgagccaag agtggttatc gcttgatctt aacgtggtgg tggtgaatga
    40741 cctgcaacaa gcggtagagc atatccgcca ttatggttcg cagcattcag aggggatttt
    40801 aacctccgat tatcaacttg cccgtcaatt tgtacaacag gttgatgccg cggcggttta
    40861 tattaatgcc agcacccgtt ttaccgatgg tggtgagttt ggtttagggg cagaagtggc
    40921 agttagcacg cagaaattac acgcacgagg cccgatggga ttagaagcct taaccaccta
    40981 caaatgggtg tgtgaaggcg attatttggt gagaggttaa gatgttaaat cgactgtgga
    41041 gatttattaa gctctttgcc aagcgttaca atgaaaataa cattgcgatt tcagccggtt
    41101 atctcactta tagcacaatg ctggcgatag tgccgtttat tgtcgtgctg ttttccattt
    41161 ttaccttttt tccgattttc cacgaagcaa acgagcagtt aaaagcgttc atttatgaca
    41221 actttgcccc gagtgcgagc gagatggtgt cggaatacat tgagttgttt gtcagtaatg
    41281 ccaaacaaat ggggctggta agttttatcg gcttatttgt ggttactatt atgctgatta
    41341 agagtattga tgaggcattg aataccattt ggcacgataa tcgtcagcgt ccgatgtggt
    41401 tctctttctt gctttacttt ctcattttgc tgtttggccc gctgcttgcc ggtgctagca
    41461 ttgcgattag cacctatgta atgtcgcttt ctatttttaa tggaaatgga gcgttatcgc
    41521 tcgggcagca tttattagaa ttgatgccgt ttttgctaat ttggctactt tttaccttag
    41581 tgtataaatt tattccaatt agaaaggtaa aatttcaaca cgctgctatc ggggcattaa
    41641 tggcagcgat tttctttact ttagggaaga aagcctttat ttggtatatt actgccttcc
    41701 cgtcttatca ggcaatttat ggagcattag cggtgttacc gattatgctg ttatggattc
    41761 agttaagttg gcaggtggta ttacttggcg ggcaatttgc ggcggtttta gacgaaatgg
    41821 aaacagacaa ggggagcatt aatgataggc ttaattcagc gggttaaatt cgcaaaagtg
    41881 gaggttgaag ggcaagtcgt tggcgaaatt gcaagcggtt tgttggtgct gctcggtgtg
    41941 gaaaaagacg atgatgaagc gaaagcagat aagctactgg aaaaagtgct gaattatcgg
    42001 gtgttttcgg atagcgaggg gaaaatgaac ttaaacgtac agcaagcagg tggcagtttg
    42061 ttagtggttt cacagtttac ccttgcggcg gataccaata aaggcttgcg tcctagtttc
    42121 tcaaaaggag caagcccggt tgatgccgaa cgtttgtatg cctactttca tcaacaagcc
    42181 gccactaaga ttcataccca aaccgggcaa tttgcagccg atatgcaagt cagcctacaa
    42241 aatgacgggc ctgttacctt ttggttgcag gtttaggttt taccctctct ctgcttgttt
    42301 cacttaacgt ttcaacaagc tgtctctctc cctcaggggg agagagttta ttattagatt
    42361 acttcggcaa tctctgacac ttcgggcaaa aataggtatt acgttgcccg attactttag
    42421 tttcaatcgg ctttccgcag tcattacagg tttccccttt tcttccatac acttgcaaca
    42481 cttgagcaaa atagcctggt ttgccgtcag gttggataaa atctttcagt gttgtgccgc
    42541 cttgaataat cgctttagtc agcacttctt tgatggtttt tactaaacgt tcgcactgtt
    42601 ttttagtcag gttttgtgct gcaagctcag ggtgaatgcc tgccataaat aaactttcgc
    42661 acgcatagat attccccacc ccaacaacca cttcattggt cataataaag gttttacaag
    42721 cggtcgtttt tttgcggctt tttgcaaata agtaatctgc tgtgaaatcg tttgaaagcg
    42781 gttcaggccc gagtttacgc aacagttcgt gatcttctgc tttttctgcc catagccaac
    42841 agccgaattt gcgagggtcg ttatagcgta aaattgtgcc gttttgggta ataagatcga
    42901 cgtggtcgtg tttgccaatt tctttttgtt gacgttcttg caaaatcccg agcgagccgg
    42961 acattcccag atgcaccaaa atatcgcctt tgtcggtgcg gataatcaga tatttggcac
    43021 gtctttctac tgcggtaatt tttgcccctg ccatttggct taattcagga ctcaccgtcc
    43081 aacgtaactt tggctgacga acgatgattt gttcaatagt ttgcccaacc aaatagggcg
    43141 atacaccacg aacgctggtt tcaacttcgg gtaattcagg cattattctc tcctaaaaaa
    43201 gaggcagtga atgctcactg cctttacttt atttatgctt tcgaccggta agcgggtgga
    43261 taattgctcc aataatagct ccaatgatag cgaaaggtag ccattccatc gagtaggatt
    43321 ttagaggcaa gttttcggta aacccgacac cggcaactga agctatcgct acaattgtca
    43381 ctaataggag tgatagacgt tgtgcagaca acggaagttt aatcactaaa ttaatcagca
    43441 acattaaaat gacagtcatt gctattgggt agagaactaa taataccgga atggatttgc
    43501 taataacttc ttttaatcct tggttagcaa cagtaaaact aatcacagta aataagatag
    43561 cataaacttt atatgaaatt ttcgggaaaa tttcattaaa gtattcactg actgatacgg
    43621 ctaaaccgac agcagtggtt aaacaggcaa gtgaaacaat cactcctaag acactacgtc
    43681 cgagttcacc gaaggcttgg gtagtcacag tgttaagaat gtaagtacct agatccaatt
    43741 ttctttctga taacatcgaa agtgtgtttg cactaattgg catattatta ccaatccaac
    43801 ccaatgaaat ataaattaca gctagagcaa ctgctgcaac taagccggca gaaactgttt
    43861 ggcgttgtaa tgcggcttgg cttacccctt tcccacgaat agcatttaat acaattaccg
    43921 aataggctaa cgaagcaagt gcatccatag ttagatagcc atcaaccata cctttaaaaa
    43981 agtaagattg ttcattcgta ttaggcgtag tgatttgtgg atcggtatct aaaataaagc
    44041 cggctcgaat aactaatcca atgatggtta taagcaagat cggggtaaga attgcaccaa
    44101 tgcgatcaac cattttattt ggatttagcg ctaaccatag ggtaaaggca aagtaaatta
    44161 aggtaaaaat taacattgac acttggctgg aatcccctaa aaacggcatt atcgccattt
    44221 cataggcagt tgctgccgtg cgcggaccgg caaagaatgg accgatcgct aaatagatag
    44281 aagttaggaa tgctaaagaa aaccaagggt ggattttgtc taatgcagat ttatagcctc
    44341 cattataaaa tgcactgacg ataataccga gtagaggaag ccctactcca gttaaaacaa
    44401 agcctgaaat ggctgagaaa aattctgtac tactttcata acctaatttt ggtgggaaaa
    44461 tcagattgcc ggcaccaaag aaaatagcaa acaataaaaa gcctactact aatgtatttc
    44521 tagtcataac atattcacac tttttcacct atacctataa agcaggtgat aacacaaaat
    44581 aacaaataac aaaaccgaac tctgaattta caaagctcgg ttgaaaaaag accgcttgta
    44641 gcggattagc tcatatataa accgccatta acgtgaatgg tttcaccgtt gatataacgg
    44701 gcatcatcgc tggctaagaa agcgactgct ttggcaatat cttgtggaga accgagttca
    44761 ccggcaggaa tttggcttaa aatcgcattt ttctgatctt cggttagctc atcggtcata
    44821 tcagtggcga taaagcccgg agcaaccacg tttaccgtaa tgccgcggct tgctacttct
    44881 ttcgctaaag atttagaaaa accaactaag cctgctttgg cagcacagta gttggtttgc
    44941 cccgggttgc ccattgagcc gaccacagaa ccgatcgtga taatgcgtcc gccttttttc
    45001 atcatcgggc gtaataccgc tttggataaa cgataaaccg aagttaagtt agtttgaatg
    45061 atgtcgaacc aatcctcatc tttcatacgc attaataagc cgtcacgggt aatgccggcg
    45121 ttattgacta acacgtccac atcgccaaag gtctctttga tctgctttaa tacgctctca
    45181 atcgactctg catcggcaac atttagcact aagcctttgc cgttctcgcc taaataagct
    45241 gaaatagatt ccgccccttt ttcagaggtt gcggtgccga ctacgatgta gccttttgct
    45301 accaattctt cggcaatcgc tttgccgatt ccacgggttg cccctgtaac taatgcgatt
    45361 ttgctcataa attctcctta gtatgacgtt ataacgtcag aatataaaaa ataaaaaggg
    45421 taatcaagta gtttatcacg gtcgttaagc caccaaataa ggcatatttc accgcactac
    45481 cttgtttagg gtaaatccaa cgtgggcgag taaatgccca aatagctgaa aaaaacagtg
    45541 gccctaaact actaaacaga taaatttgaa ataaaacgac cgcacttttg gggtcatttt
    45601 cgcttaatag cacaccatat aatacccaag cttgaatagc agcagctgta atagctgaac
    45661 ctccgataaa ggcgtggcga attttcgggt ttagacttaa aaaataggct aaaaatgagc
    45721 aaccggcagc aatggataac attcccatat ttccgcctaa tgtttcttta gcgataccaa
    45781 cagtataagc taaaggtaaa atcactaagg caatcaatgc acttattagc ataaataggg
    45841 tttctttact cattttacgc tcccgaaaat taagcctcaa ccgcctcaaa gctggcaaca
    45901 tcatttaccg ctttggctga taattctttt acaatacgac ctgctaaacc ggttaggact
    45961 ttgtttggcc cgatttcata taaagtagtg atgccatctt gtgccatttt ttcaacggtt
    46021 tccgtccaac gaacagggct gtaaagttgg cgaacaagtg cattacgaat ggtatcggca
    46081 tctgtttcca ctgccacatc cacgttgttg ataacaggga caagcggttg atttagctca
    46141 atattttgca aggcttcggc taatttttct gccgccggtt tcattaaagc acagtgtgaa
    46201 ggtacgctca ccgctaatgg taacgcacgt tttgcacctg cggctttaca caattctcct
    46261 gctttttctg ccgctgcttt tgtgccggca atcacaactt gccccgggct gttaaagttt
    46321 accgcagaga caatttcacc ggtctcgctt gctgcttgct cgcacgcttt aataatgctt
    46381 tcgttatcta aaccgataat cgcaaacatc gcaccgctgc ctgccggcac ggcttcttgc
    46441 attgcacgac cacgcaactc gaccaattta atcgcatctt ggaaatccaa cacaccggca
    46501 cacaccaacg ctgagtattc acccaaacta tgccctgcca tcacggctgg tttttgctca
    46561 gggaattttt gttgccaaat gcggaaaagt gccacgcttg aggcaagcaa cgcaggttga
    46621 gtgcggtggg tttgccctaa ctcttcggca gtaccgtttt gcactaaatc ccataagtca
    46681 tagccaagca catcacttgc ttgtttgaag gtttcttcca cgattggata ttgtggcgca
    46741 aggtcggcaa gcattccaac cgcttgtgag ccttgaccgg ggaaaaccat agcgaatttt
    46801 gacatttgtt attattcctt ctgtaaattt ttaagttgaa atctatatct gagttttcgt
    46861 tactttcttt gcatgtgcaa agaaagtaac caaagaaaca cccctacttc accgcttatc
    46921 ctcacttagt ttgaattggt ttcacggaaa atttacattc gcttcgctca gagtaaattt
    46981 tcctaccaat tcaaacacgt tcgggcggtt cagaagggaa gagtacatca ctatattttg
    47041 taaaaaattt tgaataatgt accgcttgtc ccgtctgagc gacttgcgat ttctaggaaa
    47101 atttgtactg tttgagcgta gcgagtttac aaattttccg ttaaggaaat cgtaactaag
    47161 cgaagttcgg gtcgcctttc ttttggttac ttttctttgg cgaagcaaag aaaagtaaca
    47221 tttaatcggg tgagtaatag agcttaccga tttcaatccg ctgacgccct gtttccaacc
    47281 gccatttgtt gctatctctt aacgaataga cgcaaccgca gtattcttgc tggtagaaac
    47341 gttcacgttt gctgatttcg atcattcgtt gtgagccgcc gcctttacgc cagttgtagt
    47401 cccagtaaac cacgtcatca aatttggctg ctgcacggtg accacagtcg ttgatttggt
    47461 tcatatcttt ccatcgggaa atgcctaagc aactggtaaa tacagggaaa ccgttgttgt
    47521 gagcgtattc cgctgctttt tcaaaccgca tatcaaagca cattgtgcaa cgaatgcctc
    47581 gttccggctc ccattccatt cctttggctt ttttgaacca ctctttgcgg tcgttttcgt
    47641 agtcatcgtc taaatcgata aacggaatac cccacttttc ggcaaagcga atattctctt
    47701 ccttgcggat caaatactct ttcagcgggt gaatgttcgg gttataaaaa tagatcgtaa
    47761 actcaatgcc ggaggcgtga atagcctcca ttacctcacc cgagcaaggg gcacagcaag
    47821 agtgcagcag taatttgtta tgtccgtttg gcagcgttaa tttctcacgc acaaacgggg
    47881 cattcgggcc ttttttctga ttttgagcac ggcgtctcgc tcgtacgctt tcaatatgtt
    47941 cttggggtcg ttggttttgt tcagtcattg ttatgttggg gcaaataaca tttgcccaaa
    48001 agaattatag gttatggggc aaatatcatt tgcccctaca agtggttaaa tttatatgat
    48061 tttttgcaaa ttaataagag cgatccaccg ataaatacgc caatgaaacc aaggcttgtt
    48121 tgtactcgct ttccggtaaa acccctaatg aatccaccgc tttttgggct tcttcacggg
    48181 ctttttgcat ggcataatcc agagattgat gttcttgcat aattgccaat acttgtggaa
    48241 tttgttccaa ttcgccgccg ttttcgatag cattgcgaat cagctctgct tgagtagttt
    48301 tgcctgcttt gtcggcagcg tgcattgcgt ggagcaatgg caaggttggc ttaccttcca
    48361 caaagtcatc gcctacgttt ttgcctaaac tttcgctttg agcggagtag tctaaaatat
    48421 cgtcaatcag ctggaatgcc gtgcctaagt agcaaccgta attttttaat gcggtttcaa
    48481 tttcctcaga agcatcagcc gcaatcgcca cgcattgagt ggcggcttca aacaagcggg
    48541 cggttttatt gtaaatgacc cgcatatagt tcgcttcagt ggtgtttggg tcgttcacgt
    48601 tcattaattg ctgaacttcc ccttctgcca acgcattggt ggcggcagac atcactttta
    48661 acacacgcag agagtctaaa tccgtcatca tctggaacga acgggtatag atgaaatccc
    48721 ctaccaatac actagccgca ttgccaaaat gggcgtttgc ggttggtctg ccacgacgca
    48781 tatcggattc atcgactaca tcatcgtgca aaagtgtagc agtatgcaca aactcaataa
    48841 aagcagccgc cgtgatatgc tttttaccac gataacccaa ggcacgagcc gcaagcaccg
    48901 caattaacgg gcgaatacgt ttcccaccgc ctgcgatgat ataatgtccg agctggttaa
    48961 tcagtagcac ttcggaatta agttgagcta aaatttcggc atttaccgct tgcatatctt
    49021 cattcgcaag ggcttgaatt tgttctaaag aaaaaagttg cacagccatc gaatccataa
    49081 agtaagacga aaattgagta gattctacct taatttagcc tgtgttcaaa aaagaattat
    49141 gattttgttg taaaatcgga gcagtctatt gttttttagt cgcagttgaa acaagcggta
    49201 gtatttttac cattttttgc aaatttcaaa aaattctcaa aatcgctctt gctctttcga
    49261 atctttttcc gtagaattgc aaccctattt ttatgaatta atttagtgcc taaaagcaaa
    49321 agcagttggc acatagcgga gtaaatatgt acgcagtttt ccaaagtggc ggcaaacaac
    49381 accgagtaag tgaaggtcaa gtagttcgtt tagaaaaact tgaacttgca actggtgaga
    49441 aagttgaatt tgactcagtg ttaatggtcg ttaacggtga agatgttaaa atcggtgcac
    49501 cggttgtagc aggtgcaaaa gtagtggctg aagttgtagc acaaggtcgt ggcgagaaag
    49561 ttaaaatcgt taagttccgt cgtcgtaaac acagccgtaa acaacaaggt catcgtcagt
    49621 ggttcacaga agtgaaaatc actgggattc aagcataatt tcagaggaga tctagaagat
    49681 ggcaactaaa aaagctggtg gttcaactcg taacggtcgt gattctgaag ctaaacgcct
    49741 tggtgttaaa cgtttcggtg gtgaatctgt attagcaggt agcattatcg ttcgtcaacg
    49801 tggtactaaa ttccacgcag gttcaaatgt aggtatgggt aaagaccaca ctttatttgc
    49861 aactgctgac ggtaaagtta aatttgaagt gaaaggcgag aaaagccgta aatatgtaag
    49921 catcattgct gactaatcat ttcaaaatca ataagagacc tcgccaatgg cggggttttt
    49981 ttgtatctca atctttctaa aatatagaaa catagaatag aaaaaggaat ttccacgatg
    50041 aaacaacgcc ccttacttgg cttttcactt gcattaaccg cagcaatgac ctggggaacg
    50101 ctaccgattg ccgcccagca agtattgaaa gtgatagatg cccaaacttt agtttgggtt
    50161 aggttcgttg tggcatcagt agggctattg ctgattctag gatttgcaaa acgtttaccc
    50221 aaattgaccg cttgtagcaa aaaagaactc ggtttaattt tgttaggggt gtgtggtctg
    50281 tcggcaaatt tctttttgtt tgcagaggct ctacactatg tttcgcccac cattaaccaa
    50341 gtattgtggc agttagctcc attttcgatg attctactag gcgtattatt gtttaaggaa
    50401 aagttcggct tgtttcaaaa gattggattt gtgttattga ttgcagggct tgtcgcattt
    50461 tttaacgata aatttgctga aattttacag ctcaacacct acgctctcgg agtgttattg
    50521 agtgccggag ccagcttgat ttgggtgcta tacggcgtgg ctcaaaaatt attattagcg
    50581 aaatttaact ctcagcaagt gctgtttatt atttacatcg gctgttctct gctgatgtta
    50641 ccgtttgcct caccggcaca gttaggcaat cttgaggatg gttttctgtg gggttgcttt
    50701 atttattgct gttgaacacc ttaattggct acggttcata cggtgaggcg ttgaatcatt
    50761 gggatacttc aaaggttagc attgtaacca cgatgttgcc gatttttacg atgatctttt
    50821 ccaaccttag ctactatttt tatccgcata tttttgccaa gccggatatg aattggatca
    50881 gttatcttgg ggcgttggtg gtcgtcagtg gggcgatttt agcgattgca ggcgataagc
    50941 tatttaggcg taattagaaa ctacaagcgg ttgtaaatgg agaaaaactt acaaccgctt
    51001 gcttttaaat cacctcaaga gtttcaagag cgtatagaat gccgtcttcc tcaagcggct
    51061 tggtgatgaa atctgccacc gcttttaatt ccggcacgcc attacccatt gccacaccaa
    51121 cacctacggt cgggagcatt tccaagtcgt taataccatc gccaaatgcc atcgcacttt
    51181 caatctcaat attcaaggtt gctaatacat cttgaatgcc acgagctttc gaattttctt
    51241 ttcgcagaat atctaccgca ttggggtgcc agcgagcctc ttttaaatca tttgcaaaaa
    51301 tgccactatt ttcgaccgct tgtttctgct cttcggtgta gaacagtaac atttgcacaa
    51361 ttttctcttt ttcgtagtag tgtggatcga tcaaataatt cggtgtgatc ggtaaaaccg
    51421 cttcgtgcac aatcggattg gtttcggaaa ctgcaatcgt cattggcgta ataaaggcat
    51481 acagaatacc caaagcattc gctttttcga taatacgttc aatttgctca cggcttaacg
    51541 aataatcact aattatttga tctttataga aattatattg cccgttaatg gtaacaaaca
    51601 gctcaaaacc gatttcaggg tttaaataag gtttgagagc ttcaggaaaa cagccgtgat
    51661 ttctgccggt ggcaatggcc ggaataatgc ctttggcttt taaacgaggt aatacctgct
    51721 cggtaattga ttttggaata taggctttat gttttacata gagggtgtca tcaatatcga
    51781 aaaagacaat tttgatcggt ttttggaggg atttcatctc ggtttccttt ttatttactg
    51841 ataatgagat tttactcttt tttcgagcga tgtcacaaaa atagccggaa aaaataaggc
    51901 taaatttgat aatctgcaaa taaaaggagg aaatgtgaat ttattcggct tccgttgctt
    51961 tcattgtaat catccactcg ctattggcgt gcaaggcatt tgcagccatt gccaaaaatt
    52021 gctaaaacca accccttatt gtcgtcattg tggaatgagt gcggtggagt ttcgaaacgc
    52081 ttgtggctat tgtttgaaaa atgaaccgaa gtggcataaa ttagtgaggg taaatgaata
    52141 ccgagcgcca ctttcacatt gggtacatca atttaagttc cagcagcaat attggtggga
    52201 tcaagccctt gcccgacaat tgctgctggc aatcaaacaa gctcaaaggg aacaggttct
    52261 gagcttgcct gaagtgatta tgcctgtacc acttttttgg cacagacatt ggaaaagagg
    52321 gtttaatcaa agcgaattat tgtgtgattg gttatcgaag tggttacaga ttccgctgga
    52381 tacccagagt ttacaacgtg tgagagcaac cgtctcacaa agagaattga ccgctgctga
    52441 acggcggaaa aatctgcgtg gggcattttt ctatcaaccg ttaaaagcct ataaacgagt
    52501 ggcgattgtt gatgatgtgc tcaccacagg ttccacctta aatgtaattt gtgccgagtt
    52561 actcaaagct ggagtagtag aaattcaggt ttgggtgtta gcgagagcct aattgtttat
    52621 taatggtaaa taatctattt catgacggct ggattgtgaa gtataggttt ttaaaataga
    52681 atgcctgcct caatcaattg acctttatat cacaatttat tttaaggaaa gcaaatgaac
    52741 tctactttaa caaatttaca acctttagcg tttttaatca cccgtgttgt tgccggttat
    52801 atgtttttat tacacggcac agcgaaattt tttgaatttc caatgtcgat gaccaacgga
    52861 aacggcagtg taccccttgc ctccatttat ggtgtaggcg gtattttgga aattgtgggc
    52921 ggaattttct ttattttagg tctatttacc cgccaaacag cgtttatcct ttcaggtatg
    52981 atggcatacg cgttctttat tgctcacgga gctcaaggca atgtgctatt acctttatta
    53041 aacggcggtg aattagcagg cgtgtattcg gtattattct taacctatat ttttatcggt
    53101 ggcggaaaat actcgttaga tgcaaaactc tttaacaaag cctaattggt tttgcagtaa
    53161 ataatcaagc ggtcagattt ggtaaaaaat ttacttaatc tgaccgcttg tttttttgtt
    53221 aaaattaaat tagcacattt gcaacggcga taccgacaat acaggcagta attacgccaa
    53281 ctaaacccgg agccataaag ctgtggttga agtaatattt accgatttta gttgtaccgg
    53341 ttacgtcaaa gttaacggtt gcgatatcag acggataatt cggaataaag aagtaagcat
    53401 aagttgccgg cattaaacca actaataatg gagcaggcaa gcccattgca atgcctaccg
    53461 gtaataacat ttttgcggtt acggcttggc tgtttactac tacagatacc gcaaacaagg
    53521 cgaaggcgaa tgtccaaggt tgggctcgaa ccatttctgt taccccttct ttgaacgctg
    53581 gcattgcatg ggtgaagtaa gtatcactca tccaagcaat cccgaaaatc gcaatggttg
    53641 ctaccatacc ggatttgaaa acgatgccgt ttggtacttt tttcgggtcg gttttagtta
    53701 aaattaagat taaacccccg aaagttagca tcacgatttg aatgatttga tccataccgg
    53761 caacttttcc tgtagcagca accgttggtt taatagccgg aatcattgca ataatcacaa
    53821 tggttgcaat agcggctagg aacagataaa ccgagttttt cgcacttgcc ggtagttttt
    53881 cgtctaaaga cgttgcactc gtttgctcga tttgtttgcg tagctcaggg tcttgcatac
    53941 ggcgttgata ctcaggatcg tcttccaact ctttaccacg acgtaagcta tataatgaca
    54001 tcgcaatcac accacagaag gttgcggtga tggttacgcc gactacattc aataaagtca
    54061 ccccttcaaa gcccggtaat ttaacgattt cggttaagta ataggcaact gcagcagaaa
    54121 gtgggctacc ggtaatacct aattgtgaag caacagaggc tgctgccatc gggcgttccg
    54181 ggcgaatttt attttttaag gcaatatcac cgataatcgg cataatagag taaaccgaat
    54241 gccctgtgcc gagcattaag gtcatcagat aagtgacaag tgggccaaga aaggtaatac
    54301 gttttgggtt gctacgcaaa atgcgttcgg caacttgcaa cataaatttc aaaccgccag
    54361 cggcttctag aatggaggca caagtaacta cagccaaaat cacgagcatc acgctaattg
    54421 gcggagcgga aagcggcatt cctaagaaga acacttcaac aaataagccg atgccggaaa
    54481 ccacacctaa accgatgcca ccgtaacggc tacctgcata taaaaaggct aataaaagta
    54541 aaaattctgc ataaagcata agaacctcaa attaaaaaat aatcactaga aagaagtatg
    54601 acctaatctt ttttttaaaa ctttgagata aatcaaaaat agttaactct aaagagggat
    54661 accgataaat tttccaattt tacgattcgc caccaaaatg gtagaatttt cgcccaatgt
    54721 ggctttaagt ttatgtaagg agtgataaat gcagagctat ccttatttgc tggtgaatgt
    54781 gtttgcaaca agccattttg gcggcaaccc gcttgcagta ttttatgaag cggacggatt
    54841 aaccgactta caaatgcaac ttattgctcg ccaatttaac ctttctgaag tggtatttat
    54901 tcaatcttcc accgattcac aagcggtcaa aaaactcaaa atttttacgc ctgattatga
    54961 aatgccgttc gccggccacc caactgttgg agcggctttt gtgttgcatt ccgcctttga
    55021 ttttccaaca acctatcgct tgcaaactaa tgccggattg gtagcgattc aacatcaaca
    55081 taatgtgact acttttgctt taaccaatgg tgtgaacctg gaaaacacac cgctaagccg
    55141 tgcagaatgt gcctcaatat tggggctgaa tgttgcggat attgcgtccg agccttgtta
    55201 tgtaaacacc ggcgtggagc agttattggt tgagttagct tctcaacaag cggtcgaaaa
    55261 gtgcaaaata aatgcaaatc tggctgaaaa agcatttttg aaagacagtg tatatgtttg
    55321 gtgtcgtgag ggaaatgagg cgaaagtgcg actgtttttt caatcgcaag gttcgattgt
    55381 cgaagacccc ggcaccggtt cggcagcggc aaatttaggc ggttggcaca ttgcacaagg
    55441 caaaatacca atccagcttc agatctcaca aggtgatgaa attcaacggc cgaatcgcct
    55501 gttattaaaa gtcgatcaaa acgggaagat ttttgttggc ggagaggtta ttttagtcgg
    55561 caaaggcgag ttttatttac ccgaatgagg gtaagcaaat tctgtttgct ataagtgaat
    55621 ttttatgcaa ttattttgca taaaataaat tttaatgttt acagggagaa acaaaatggc
    55681 atttaactta aaaaacagac atttactcag tttagtaaac cacactgagc gtgaaattcg
    55741 ctttttgttg gatttagcaa gagatttaaa acgggcgaaa tatgccggca ctgagcagca
    55801 aaaattaaag ggcaaaaata ttgccttaat ttttgagaaa acctcgaccc gtactcgttg
    55861 tgcctttgaa gtagcagctt acgatcaagg ggctcacgtt acctatattg acccgaactc
    55921 ctcgcaaatc gggcataaag aatcaatgaa agataccgcc cgagtgctag gcagaatgta
    55981 tgatgcgatt caatatcgcg gctttaaaca atcggtagta caagagcttg ccgattatgc
    56041 cggcgtgccg gtgtttaacg gcttaaccga tgaattccac ccaacccaaa tgttggctga
    56101 cgtgctaacg atgatcgaaa attgcgaaaa accgcttagc caaatcagtt atgtctatat
    56161 cggcgatgct cgcaataata tgggtaattc actcctgttg attggggcga aattggggat
    56221 ggacgtgcga atttgtgccc cgaaagcctt attaccggaa gatgcattcg tgaaaatgtg
    56281 tgaaaaattt gcagctgaat cgggggcaag aatgacggta accgaagata ttgagactgc
    56341 aattaaaggt gtcgattttg tgcatactga tgtttgggtt tcaatgggtg aaccgctaga
    56401 gagctggact gaacgtatag atttattaat gccttaccga gtaacgcctg aattaatgca
    56461 agcaaccgac aacccgaaag tgaaatttat gcactgctta ccggcgttcc acaacagtga
    56521 aactaaagtc ggtaaagaga tcgccgaaaa atatccggca ctggcaaacg gcattgaagt
    56581 aaccgaagag gtgtttgaat cgccaatgaa tgtggcattc gagcaagcag aaaatcgaat
    56641 gcacactatt aaagcggtaa tggtagcaag tttggcataa tagctaagtc taaaaagcgg
    56701 attatcttgg gtggtaatct gctttttagc ttaaggctag atcatcgtag ctgaagaaga
    56761 tttgtggaaa acactaaccc ggggagtaaa ttaaaaattc aaataaaaat cttgggtaag
    56821 tcttttaaac tcagtagtgt aacaattatc tagatcatag atgatcagct ctttatgttc
    56881 acgcttttgc ttgtttaaac taaaactcac tatactgcgt ttagccaatt tgccgctctt
    56941 ggtaaaaatt aaccattgtt caacacaata caatccaatt tgttcacttt ggtcaactaa
    57001 tttttctgca gctgctatag gtaaaatcag tgtaattttc ccgttctctg ctaaccatgg
    57061 ttttgctttt gccagccaat tcaagtggct gtaatggcta attgagcgag ctaaatctct
    57121 ctctgtggtt cgagctgcaa gtgaatctgc aaaataaggt gggttactaa caatcaagtc
    57181 aaatttctgt tcaaatgcct gctgcatcac atcaccttgc aaaacggaaa tccgatttgc
    57241 ccatgcagaa ttttgggcat tttcgaccgc ttgttggtag gcatttggtt caagttccaa
    57301 cgcagtaatg tgacaacaat catctgttct ctgagcaagc ataagtgcta ctaaaccaga
    57361 acctataccc agatctaaaa tattctgaca atcttttatg tgagcaatcg ctcccaatag
    57421 aataccatct gtattgactt tcattgcaca tctgtcgtgc cgaataaaaa actgtttaaa
    57481 ttgaaatcct tgcgacatag ctatctgaaa aagtaacccc cgataatctt tcattatcgg
    57541 gggttaatta tattattgca acttagttac aagaacaacc ttgtgcgtag tctgaacatt
    57601 cagcacaagc tgcagtgaac atccatacta atttttcttg ttctttgatg taatcactca
    57661 tttgagaagc agtaccttca tcgtttgcat catttgctag agcaagaatt tcacgttgtt
    57721 gtcccagtaa tgttttgaaa ccatttaaag taccacgtaa acattcttgt gcagctgaaa
    57781 caccaatatg ttcttgaatt tgtgacttgg ttaaatattg gctgaacgca ttttgaggtg
    57841 tgtgacctaa ggttaaaata cgttctgcaa tttcatctac ttttgtcact aaatcatcgt
    57901 agatttcttc aaattttgca tgtaattcaa agaagttcac accacgtaca ttccaatggt
    57961 agccacgtac attagtgtaa aacacttggt aagtagctaa taaaccattt aactcatctg
    58021 ctaatttttt tgcgatttct ttatctaaac cgatatttga cattgccata atatgctcct
    58081 cttaattgtt aatcttaaaa aattaaatta gatactgctt atttaattta ttactatatt
    58141 acaatccaaa atgaaaacta gcaaatagtt ataatatata ctttttatag gtagaatcta
    58201 tcagcttgtg tatcttgaat gataatggct atcaaattta tttttattca attggtgcaa
    58261 cttcttcagt agggattggt tgcttccctt cagcttcttc tgctttagcc tcgatatttt
    58321 cttttttcag cgaaagtgca tcccaaacac ttggtttttc tgtagccact acattacctg
    58381 cactggtaca ataacgttgc cctttatctc gccaaactgg aatttgtctg ccactatcgc
    58441 aattccagct accatagcta ttaatcccca cccattgcat cgtattaagt ttcggtaatc
    58501 tatacgcctg aggcaaggct ctctcaagat attgcttata cacatacaat gcaccacttg
    58561 aaccggtgag gttggtatcc ccattgttat ctttacccag ccagacggtt gtgacgtgtt
    58621 cgccatcaat tcccacaaac caagtatctc gagcgttatt ggttgtaccg gttttgccgg
    58681 ctaatttcag tttggcaaaa tcgttttgta agctacgagc cgtacctcgt tccacaacct
    58741 gttgcatcgc atacattgtt tgaaccgcag cttccggtgg aagcacctgc tcgctcactt
    58801 tgccgctatc tcgctgatag aacatttcgc cattgtgcga aataatcgcc tcaatggtgg
    58861 ttaatggtgt tttcagccct tcgttggcaa ttacttgata agagcgggtt acatcgtaag
    58921 gcgagatcga atatgaacct agcaaggttg atgggtaagg cggaatttcc gcattatccc
    58981 agcccatctc tttttgtttg gcaatgactt tttttaagcc aactttcata ccaatattca
    59041 ccgttggaat attcagagag cggactaagg cgtccattaa catcaccgag ccactaaaac
    59101 tgcggtcgta gttacggggt gtccagtagg ttgaaccaac cttaattgaa atttgtttat
    59161 tttggatcgg tgtatttaaa cggaataatt caggctgtgc caaggcaatc gcataaaccg
    59221 atggtttgac taaagaaccg atttggcgtt ttgactgaat cgcacggtta aagccggcaa
    59281 attgggttaa gcggtctcct actatcgccc tcactttacc tgtgcggtat tccgccacga
    59341 caatagccga ttgcaaatcg ctgacttttt tatttttact ttccagatct tccaaaccgg
    59401 taatcactgc ttgttcggct gaacgttgct gtttacggtc aagggtcgta aaaattttag
    59461 taccggaaag ttgagctgac ttaatttcgc ctaactcatt tttcaaatca atggttaatg
    59521 cctgcataaa ggcaggttgc tcacggtaaa tcgtgccttt ttcacgaata ttaagcgggc
    59581 gggagcttaa cagagcgtaa agttcttgat tgatcacttg atgatccagc aataatcgca
    59641 acaccacatt acgtcgctct accgcacctt gcggatttcg ccacgggtta tacagtgatg
    59701 gaccttttac cattcccacc aataacgcaa tttggtctaa gctaatctct tggatcggac
    59761 gaccaaaata gaattggctt gccaatgcaa aaccgtgaat ttggtagcta ccgttctgcc
    59821 ctaaataaat ttcgttgaga taggtttcta aaatgcggtt tttatcgtaa cggaagtcta
    59881 aaatcaccga cattaacgct tcatttacct tacgcaccaa cgatctttca ttacttaaga
    59941 acaagttttt cactaactgt tgcgttaagg tactgccacc ctgcactgtt ctgccagctt
    60001 ggtagttagt gattaaagca cgggcaatac cgattgggct aatcccatcg tgctgataaa
    60061 agcggcgatc ttcggttaaa atcagtgact caattaacaa gcgagggtat tgttgtaagc
    60121 gtaatgcttg acgttcttca tcgctatcgg aatgcagtaa cgccagtaat ttcggatcca
    60181 agcggaactc ctcgatcaac ttaccctgca ccaaatcttc aatataagtt aatttatctt
    60241 gtttgaaagt taaacgaagc actcgttgcg attccggtgt ttctggaaac gggaaagctc
    60301 ggcgtagcaa caccagctga ttttcttcaa ttttgaaatc gcctggtgtc gcaacttgag
    60361 aaacttgacg atagccgtta tccagcaacg cttgtttggt ttgctcaagc gttaagttgt
    60421 cttcaatttt aatgctttca atacgagcat acacctcagc tggtaattcc catatctgcc
    60481 catccatttt gctacggatt ttaccgtcta aataaatgcc gtaaaaagcc atactgcaag
    60541 ctcctatcac cccgattttg aataaggttg aaaggaaata gtttcgcttt ttcggttttt
    60601 gctcaggctc ttgctcgctc tgctcgttta actcaacatc tgacataaaa ttaacttaaa
    60661 ttagaaaagg taagcggtcg atttttgcaa attttttgca aaatcgaacc gcttgtattt
    60721 gccgtcaatt atggattgcg gcggaatttg ctgaagtccg gctcacgttt ctcgttgaac
    60781 gcattgcgtc cttcttgccc ttcttctgtc atatagaaca acattgttgc attaccagca
    60841 agctcttgca ggccagcctg accgtcacaa tctgcattca atgctgcttt taagcaacgt
    60901 aaggcaatcg ggctgttttg tagcatttcg cgacaccaac gcacagtctc tttttctaaa
    60961 tcagcataag gcacaacggt attgattaag cccatatcta acgcttcttg tgcattatat
    61021 tgacggcata agaaccaaat ttcacgcgct tttttctgac cgactaaacg tgccatatag
    61081 cttgcacccc aaccgccgtc aaatgacccc actttcgggc cggtttgacc gaattttgca
    61141 ttgtcagcgg caatggttaa atcacataac atatgtaaaa cgtgtccacc accaatcgca
    61201 tagccggcaa ccattgccac caccggtttc gggcaggtac gaatatcacg ttggaaatcc
    61261 aacacattta agtgatgcac accgctttca tctttgtagc cgccgtaatc gccacgcact
    61321 ttttggtcgc cgccggcaca gaacgcatat tcgccttcac cggttaatac gatgacgccg
    61381 attttttcat caaaacgggc atcagaaaag gcttcaatca tctcttttac cgtttgcgga
    61441 cggaaagcat tacgcacttc cggacgatta atggtgattt tagcgatacc gtcttttgat
    61501 ttatggtaac gaatatcggt gtaaccttcg ctgtgatcaa cccactcaac cggtgcatat
    61561 aaaaattctt cgcttggata taacattggt aaattccttg aaaaatgaca taaaaaattc
    61621 ttgtgattat aacggaatcg aaggaaaaag gtgaggaaat tattttgtga tccgcctcac
    61681 aatttttcac atagttgatt gccctatttt ataagagaat taaagtgtat tcgtatttat
    61741 atctttttga tcatagggct tttatgtcgt taccgaatta ctaccaagac ccgagtgtgt
    61801 tgcaccttaa taccacgcta caccacgctt attttattcc ttttgctaaa gggcaaacgc
    61861 cgaatcagtt ggaacgggaa caatctgagt tatttacttt gctaaatggc gattggaagt
    61921 ttaatttcta tccaagtccg cacgatctgc cggaggattt cctcaacacc aaatttaccc
    61981 accaaatccc cgtgccgtct aactggcaaa ctcaaggctt tgatgcccat caatacacta
    62041 acatcaacta cccgattccg tttgatccgc cttatgtgcc acaccaaaac ccttgcgggg
    62101 tgtatcagcg tgaaatcacg tttaacccca agcctaacaa acgctatttg ctaaattttg
    62161 agggcgtaga ttcgtgcctg tttgtttatg taaacggcga atttgtcggc tacgggcaaa
    62221 tcagccacag caccaatgaa tttgacatca ccaaacagct taaacagggc aaaaacagcc
    62281 tcgtcgtggt ggtgctaaaa tggtgtgacg gcagttattt ggaagatcaa gacaaattcc
    62341 gaatgtcagg cattttccgt gatgtttata ttttggaacg tgagcaaaac tacctgcaag
    62401 atttctttat ccgctaccag ttaaacgctg atctttcaaa ggcagaactc aaggtggaaa
    62461 cacaattttc cacctacacc gaagctgtgc attttcaact tttcgaccct gaaaaccgct
    62521 tagtctgcga gcaaacaagc ggtgattttt gccaagaaat ttgcaatttg tgtttgtgga
    62581 atgcggaaga tccgacactc tacacgctat gcttgagcta ccaaaacgaa attattgagc
    62641 aaaaaatcgg ctttcgtcag attcgtgtgg aaaatggcgt gatgctattc aacaacgccc
    62701 cgattaaatt taaaggggta aaccgccacg attccgaccc gaaaaccggc tacagcatta
    62761 gccgtgagca agcgttggtg gatttacgct taatgaaagc ccataacatc aacgctattc
    62821 gcaccgccca ttacccgaac gctccgtggt ttagtgaatt gtgcgatcag ctcggttttt
    62881 atctgattgc cgaaagtgat cttgaatctc acggctccag tgcagtgtat attgaaagtc
    62941 cggaaaacag cattttcctg aatgtgccaa acccgaacaa acaggaagaa attcgccaac
    63001 aagcggtcga taatttctgt tattttgcaa gagatccgct gttcaaacag gcgattttag
    63061 atcgcaacat tgccaatgtg gagcgagaca aaaaccgcac ttcggtcatt atttggtcac
    63121 ttggtaacga atccggcttt ggtgaaaatt ttgaagtcgc agcccgttgg gtaaaacaac
    63181 gggatccaag ccgtttaact cactacgaag gttcgattta ccaacattcg gcacatcaaa
    63241 acgatctttc aaacctcgat ttatacagcg agatgtaccc aagcaccgag cggttagagg
    63301 aatatttttc cgactctgcc aaccacaaac cttttatttt gtgtgaatat tctcacgcga
    63361 tgggcaattc gagtggtgat atggaagatt attggcaaac cttccaacgc tacagcggtg
    63421 cgtgcggtgg ctttgtgtgg gaatggtgcg accatgctcc tctgctcccc aactctgagc
    63481 taagtgccga acagaagacc gaaaaatacg gctatggcgg tgatttcggc gaaaccttgc
    63541 acgatggcaa tttctgtatg gacggcttgg tttcccaaca gcgtgtgcca cactctaatt
    63601 tgttagaagt gaaaaatgtg aatcgcccgg tgcgagctga gttaaaagcg ggcaaaattt
    63661 ggctgaaaaa tcagttggat ttcagcgact tagctgatta tctgaccgtg cattactgtt
    63721 tcagcgaaaa cggcgaaacc accctgcagg gacaatgttt ggtaaattgt cagccaaatc
    63781 agaccgcttg tttgccgcta acgctgcccg aaccaaacgg caaattgcaa cttttaaccc
    63841 ttgattattc tttaaatgaa agcacggctc tgttggaaaa agggcatcac ttaggctttg
    63901 accaaatcac gctgcatcaa gcgatggtca ctccagcact taatccacgc ccgcaagcgg
    63961 tcatttttgt gcaagatttt gcaaatgaat ggcggattca acagggcgac tatcgctaca
    64021 ctttcgataa actcaaaggc attttcagcc ggattgagaa aaacggcgag gcagtaattg
    64081 agcaaccgtt ggatttcaat atttggcgag ccccaaccga taacgaccgc ttaattcgtg
    64141 agttttggaa aaaagccggc tacgataact gttacaccag ggcgtatcat accgaactga
    64201 tgcaagataa aaacggcgta aacattactg ccgaatgtgg cattgtggca accgctcaaa
    64261 gtcggatttt aaccctgaaa gtgaattatc atcttgcccc gaatggcgaa atgacgattc
    64321 aggttcaggc aacccgcccc gctcatttgc cgtttttacc tcgctttggc ttgcggtttt
    64381 tcttgaataa acggaataac caagtgagct attttggcta tggcgagcag gagagttata
    64441 tcgacaaata ccatttggcg aaactcggag cttatcaaac cagcgcccga gaaaatcata
    64501 ccgattatct caaaccgcag gaaaacggca gccatttcgg tacgcattat gtgcaagcaa
    64561 atgggataac tgttacttct ccacagccgt ttagttttaa tctttcgcct tacacacagg
    64621 aagagctaac cactaaaagc cacagttatg atttggtaga aagcccttcc accgtgctgt
    64681 gtgtcgatta caaaatgagc ggcattggct caaactcttg cggcccgaat ttgaaaccgc
    64741 aatatcggtt aaatgagact aattttgagt ggcggcttaa attgagtttt taacgaaaaa
    64801 tgctcgttca aatttaattg aacgagcatc tccttttatt tcagcataat atattgtgta
    64861 ctaatacttt ctactatata gccgatattg tcttcaaatc ttaactcaat atgcttaagc
    64921 ccaagtactg aatttcctaa atccattttg agtaaatcgc ctttaatctt ttctaaaacc
    64981 tcatttttgt gttgctgggt aatagataac tgatgtttag caaagatttt tttcaaaata
    65041 tcgttaatgt taaattcaat agtagtccca agtcctttaa agtagataac aaattcagta
    65101 ggatcttgtg ttattgaaga gcagtcttga gccgtttctg agtattgata ctcaatattt
    65161 aatatatttc cctcaaaata gtaaccttga gaaaggcgtt tttggcatag cttattttct
    65221 attttttgat gggaaaatga attaggccga tataattggc tactaaatgt aatatattca
    65281 cgagcatttg ccatatctgc tttagttaag cgaaccagct cagaattagt agcttcaaaa
    65341 taacgtgggt cagtatttct ttctcttatt tcactcatta aatcgtagct tgaatttacg
    65401 ccatatttct ctttaaattg tgcagcaggc attcctctgg caacatagtg gagcattgaa
    65461 taaaaatatt cggcttcatc tcggttttca tttaatgatt cttggtattt aagtacagct
    65521 tttgtgctga ttttgttatt tacatctaat aatttgtgtt ttagcaaata gttgtccaac
    65581 cgcttggttt gatctttaag cgcaactgtt ttcggatcta aaataaacac tgaaattaaa
    65641 ataattgcta tcgacactgc agaaaagaga cgatattgcg ccaactgttt aaatagtaat
    65701 aaggtatagc aaatagataa ggttattgtg ccaatcacta aataaatacg ggcttcagtt
    65761 aagccataat ggctgaaacg aatatagatg gcataccaaa ttaatgttaa cggcaaaagt
    65821 gctaaatagg taaagtgaga ataaaaccac tgccattttg cattttttag taataattgc
    65881 accgcttgta tagctaggcc gaaagctaaa tagggaagcg ctacgtttgc aacaacccca
    65941 tctggcattt gccccttagc cgcaataaaa attacataag cataaataat tgcagtatag
    66001 ataattaatg ccggagacaa aatccagttt agtaacattt cactaatgcg gtttagatat
    66061 ctagaatcat tggtagtctg ttgttcaaga gttaaaaata aaacagggaa tgcccaaaaa
    66121 ctagaaaaaa tgccaaattt ttcaaaaata tgaaagttgt tttgtttatt taaatcaaat
    66181 aaagcaataa tggctatggt aatagcgctt aatgttgcaa aaataatgcc agataaaact
    66241 gtagcaaaga caatgttaac taatttatta gttgttccgg ctacaaaata atggttgttt
    66301 ttgtaccaat attgactgat caaacaaagg aatacacaaa atatggtagc ccaataacga
    66361 gaatcttcca ataatgttaa attaatttga ccaaagaaaa agacgattgc tatcggaatc
    66421 ggagcgaata gccaataagc tttggtatcg cgtatcaggt aaagcaaaat aaagcaaata
    66481 ggaaaaagag caattagatt ttgaaagcgt ttgattaatt cgtagtcgct cacattattg
    66541 ataagtaaaa tcgtgacgta agtaacgaat aaaatttcca gtggatgctt aatgatggtg
    66601 ctttttatca ttaaggtaaa gcgttgtagc ttacttagca taatagatct cctgcctatg
    66661 aaaagaatat ctcacag
//
LOCUS       DANLZQ010000003        56904 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.003, whole genome shotgun sequence.
ACCESSION   DANLZQ010000003 DANLZQ010000000
VERSION     DANLZQ010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 56904)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 56904)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..56904
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.003"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            22..582
                     /locus_tag="PXE50_000133"
     CDS             22..582
                     /locus_tag="PXE50_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HDL5621078.1"
                     /translation="MIAMLAVGGYSLTKYNDLMRAEEDINSVWGNVESAYQRRADLIP
                     NLVNTVKGQANFEKETLTSVIEARAKATAVTIDPSNATEEQMAKFQEAQQGVNSALSR
                     LLVSVEKYPELKAHEAFLNLQAQLEGTENRINVERNNFNEKVKEYNKQVREFPTKLAA
                     MIMGFKAKPQFKSEAGSDKAPTVNFN"
     gene            664..1122
                     /locus_tag="PXE50_000134"
     CDS             664..1122
                     /locus_tag="PXE50_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HDL5621079.1"
                     /translation="MGLFSFLSNKLPIDTQRIEQAIADLEQKTSAELRVVVERKAKIG
                     KTDNAAMLRASELFDELKMRETAEHNGVLIYLSFKPHYAAIIGDEGIHQKVDNDFWQK
                     IYATMCLDCQQGDYTQAICDAIKMVEAPLAHHFPYQADDKNELSNEVVVK"
     gene            1119..1976
                     /locus_tag="PXE50_000135"
     CDS             1119..1976
                     /locus_tag="PXE50_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HDL5621080.1"
                     /translation="MMKSLCKFLSIFNRLLLVCLALFSLNATAVTYPEPPNPFYYITD
                     YTKNTLSQQEWRTLEDALIANCAKTSSQIAVVIIPSTEGEAVSTYAHTLFNKWGIGRS
                     KNNENNGILLLIAKNDRKLFIATGRGLEGALPDAIASSIIRNDITPFFKQEQYAAGIA
                     HGLSAIMAAINGEYAPYASYGEEMQEFDDIDGLLFFLFAGIVIFLIFRPRGNSTYISP
                     SSMDQLGQILRESQRRGGGFGGGLGGGFDRGSGGFGGGFGGGFGGSRGSGDSFGGGSS
                     GGGGAGGSW"
     gene            complement(2091..2570)
                     /gene="ispF"
                     /locus_tag="PXE50_000136"
     CDS             complement(2091..2570)
                     /gene="ispF"
                     /locus_tag="PXE50_000136"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HDL5621081.1"
                     /translation="MIRIGHGFDVHAFGEDRPLMIAGVEVPYHTGFIAHSDGDVALHA
                     LTDALLGAAALGDIGKLFPDTDMQYKNADSRGLLIEAYRQVQEQGYQVGNVDVTIIAQ
                     APKMRPHIDKMRQVIADDLQCDISQVNVKATTTEKLGFTGRGEGIACEAVALLLKRA"
     gene            complement(2572..3255)
                     /gene="ispD"
                     /locus_tag="PXE50_000137"
     CDS             complement(2572..3255)
                     /gene="ispD"
                     /locus_tag="PXE50_000137"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HDL5621082.1"
                     /translation="MKRKIIAVIPASGVGSRMQAEKPKQYLQLKGKTILEHTVSIFLE
                     HPHVEKVIVAVARKDPFYSTLELLKSPKIQLVFGGETRADSVLNALQEINTENAWALV
                     HDAARPCLKRSDLDKLLQINDPQGGILAIPAVDTMKRANGTKIAHTEDRSTLWHALTP
                     QFFPAQALKQALSSAFANKLQVTDEASAMELAGYQPQLVSGRSDNIKITRPEDLALAE
                     FYLTHNLEN"
     gene            complement(3273..3551)
                     /gene="ftsB"
                     /locus_tag="PXE50_000138"
     CDS             complement(3273..3551)
                     /gene="ftsB"
                     /locus_tag="PXE50_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HDL5621083.1"
                     /translation="MRLLITFFALLLGFFQYSFWFGKNGWSDYQEVQEEIALLKVENT
                     KLTSRNKLIEAEIYDLKNGVDALEERARLEREMVKENEMFYRIVPKNK"
     gene            3826..5433
                     /gene="pckA"
                     /locus_tag="PXE50_000139"
     CDS             3826..5433
                     /gene="pckA"
                     /locus_tag="PXE50_000139"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HDL5621084.1"
                     /translation="MLNRIEQELADLGITNVKEIVRNPSYEQLFEEEMKSDLKGYEKG
                     VLTNLGAVAVDTGIFTGRSPKDKYIVLDETTKDTVWWTSDAAKNDNKPMTQSTWQSLK
                     TLVTDELSNKRLFIIDAFCGASPEHRINVRIITQVAWQAHFVKNMFIRPTEEELKDFK
                     PDFVVMNGSQVTNPNWKEQGLNSENFVAFNITEGVQIIGGTWYGGEMKKGMFSMMNYF
                     LPLKGVASMHCSANVGEEGDVAVFFGLSGTGKTTLSTDPKRKLIGDDEHGWDENGVFN
                     YEGGCYAKTINLSIENEPDIYRAIRRDALLENVVVREDGTIDFDDKSKTENTRVSYPI
                     YHIDNIAVPSKAGHAKKVIFLTADAFGVLPPVSKLTPEQTKYYFLSGFTAKLAGTERG
                     ITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMEAAGAEAYLVNTGWNGTGKRISIKDT
                     RGIIDAILDGSIEKAEMSTLPIFNLAIPTALPGVETHILDPRNTYEDKAQWQAKAEDL
                     AGRFVKNFEKYATNEEGKALIAAGPKL"
     gene            5526..6527
                     /gene="bioB"
                     /locus_tag="PXE50_000140"
     CDS             5526..6527
                     /gene="bioB"
                     /locus_tag="PXE50_000140"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HDL5621085.1"
                     /translation="MTTFQLRLKAKDELTPHPTAQYWRKCQVEGLFDLPFMDLVFRAA
                     QVHRENFDANAIQLSTLLSIKTGGCPEDCEYCPQSARYDTGIEKQTMLDVETIVEKAK
                     IAKERGASRFCMGAAWRGPRPKDIKVVSEIINAVKSLGLETCGTFGMLEEGMAEELKQ
                     AGLDYYNHNLDTDPERYNKIIHTRNHEDRMDTLGKVRNAGLKVCCGGIVGMNETRPER
                     AGLIASLANLDPQPESVPINQLIKVEGTPLTNAEDLDWTEFVRTIAVARITMPQSFVR
                     LSAGRTTMPEAMQALCFMAGANSIFYGDKLLTTENPEEDHDRQLMDKLDLYPLQYIA"
     gene            6687..6784
                     /gene="ffs"
                     /locus_tag="PXE50_000141"
     ncRNA           6687..6784
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="PXE50_000141"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            6819..7526
                     /gene="gloB"
                     /locus_tag="PXE50_000142"
     CDS             6819..7526
                     /gene="gloB"
                     /locus_tag="PXE50_000142"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HDL5621086.1"
                     /translation="MLQITPIPALKDNYIWAIRNGQDVIIIDPSEHQPALNFIAKNAL
                     NLTAILITHNHHDHTDGVSGIVEQYPNIPVYGPQEVAEFANVIVSPEQHISLFGYDVR
                     IIESGGHTAGHISYLFGYDYLFCGDALFSGGCGRVFTGDYQAQFDALQRFKNLPNSVK
                     AYPAHEYTKSNLKFAEAVLPPSCVLSEYQEQVDLLRSQNKPTLPTTIGLEMQVNPFMQ
                     AVDLAEFIALRQQKDNF"
     gene            7685..8398
                     /gene="uppS"
                     /locus_tag="PXE50_000143"
     CDS             7685..8398
                     /gene="uppS"
                     /locus_tag="PXE50_000143"
                     /EC_number="2.5.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005619022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-trans,poly-cis-decaprenylcistransferase"
                     /protein_id="HDL5621087.1"
                     /translation="MNFDPQNMPKHVAIIMDGNGRWAKQKGKLRIFGHQNGVKAVRSA
                     VSFAAKHHIQVLTLYAFSSENWSRPETEVSALMSLFMKALDSEVKQLHKNNIRLKIIG
                     DKSAFSENLQKRIAESEKLTENNTGLILNIAANYGGYWDIVQAAQQLAVHVKSEQLAV
                     EQITPALFQQHLVTENQPQVDLLIRTSGEQRISNFLLWQIAYAELFFSPVLWPDFNDE
                     AFSDAIYAYQQRERRFGGC"
     gene            8422..9291
                     /locus_tag="PXE50_000144"
     CDS             8422..9291
                     /locus_tag="PXE50_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HDL5621088.1"
                     /translation="MLKERVLSAIIMIIAVLAAIFWLSPLPLTLVLSAIVVAAMWEWA
                     QFAGFKHPVPRAIVAMVTICLLLFAIVANTDYIRATRFITDETTPILFIGCIWWLIAL
                     VLVATYPNSAKLWEKSVAAKFLFGLATLVPFLIGTLALRFHNYAFDPYQGTYLFLYVC
                     LLVWGADSGAYFAGRAFGKRKLAPKVSPGKSWEGVIGGVLTSSLIAFTFLQLTPANVF
                     GKALATTPFILVSVGMVAISVLGDLAESMFKRQAGIKDSSQLIPGHGGILDRIDSLTA
                     AVPFFATFFFFVL"
     gene            9295..10605
                     /gene="rseP"
                     /locus_tag="PXE50_000145"
     CDS             9295..10605
                     /gene="rseP"
                     /locus_tag="PXE50_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HDL5621089.1"
                     /translation="MTSIIAFFILICVLVFVHEYGHFWAARKCGVKVIRFSIGFGKVL
                     FKKKDKQGTEFVFSLIPLGGYVQMWNDETDINAPAQQALNTKSVLQRAFIIIAGPAAN
                     FIFAILAYWVVFIAGIPTVKPVIGEILPNTIASQARIPTELEITKIGHQSIQDWESAS
                     LALVGFVGNKNVPLEGNINGNSTQKYELDLSNWSIDSAKENPLTALGIRPKSAKVTAE
                     IKQVVENSPASQVGIQAGDRILQINQQPFNWFNLVELVQAGKPIELKIEQRGQIKDLV
                     VQPEKKDERYIIGVIPSYEPLADKYRTELKYDILTAFYKSIEKVWSLTQTILQFIGNL
                     ISGDLSIKNLGGPISMAKGAGATAEIGLVYYLSFMALISVNLGVMNLFPLLPLDGGQL
                     VLLAVEAIRGKALSEKIQLKFQQIGFAFVLSLMLFAFANDIIHF"
     gene            10720..13101
                     /gene="bamA"
                     /locus_tag="PXE50_000146"
     CDS             10720..13101
                     /gene="bamA"
                     /locus_tag="PXE50_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HDL5621090.1"
                     /translation="MKKLLLSSLLIANGVVAAPFVVKDIRVEGVQPTTGESIISSIPV
                     RVGQTATDTDVSNVVRHLFSQQRFADVRATREGNTLVIKVAEKPIIGKVEIEGNQAIP
                     KDALEQNLKANLINQGEIFDAAKLEAFKEGLIEHYHSTGRYEAKIDTSVSNNTEGGVN
                     IKLAINEGEVAKAKTIKFEGNNAFSDKKLLENLDIQPDVSWWNIFESSKFEQTAYQKD
                     LETLRDFYLNRGYAKFAIQDTDVQFNDNKTEVALTYKLDEGSQYHVSEMRIIGNTANM
                     DSQLNALLKEFKPGQLFRKSDLTQIEEEIKSILGDAGYGSAKVDIYPQFNEENKTVKI
                     SFVVDAGRRIYVRKIRFEGNGVTADSTLRREMRQQEGAWLSTNKASLGKARLERTGFY
                     ESVDMSMPNVEGTADQVDVVYKIKERNTGSINFGIGYGTENGISYQAGIKQDNFLGMG
                     STISLNGTRNNYGTSVNLGYTEPYFTKDGVSLGGNIFYEDYDNSDNDSMASYKRQTYG
                     INGTLGFPVNENNSYYLGLGYTHDKIKNAAREYTREKYVKSMNFEFDPAADYYKKIKA
                     DDFDFSLGWNYNSLNRGYFPTEGTTANIGGKITIPGSDNKYYRVSADFRNYYPLNREH
                     KWVISTKASIAYTNGFGGKEVPFYQLYTAGGIGTLRGFSYGAVGPQAIYYNTKSGKFD
                     SMNNDIIGGNALAAASLELITPTPFVSEKYQHNVRTSLFVDAASAWNTKWKKDEYTNL
                     PDYGDFKRFRASAGIAFQWMSPIGPLSFSYAKPIRKYDNDDIEQFQFNIGSSF"
     gene            13181..13972
                     /locus_tag="PXE50_000147"
     CDS             13181..13972
                     /locus_tag="PXE50_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HDL5621091.1"
                     /translation="MKKLFKMTGLAVALASTTGIANAADTIGFVDPSYVLQNHPVLLD
                     ASAKFDKFMKESQEKFAADEKKLADENKTLTAERNKINEDAQKLQNEQKNVEASIKKK
                     VAALEKDAPRLRSKEIQARQNAIQKEANAFQAKVTAIQKREADFAKKAEAFQKRADEF
                     QKRIEQANKENGGINPQEAQKQAVDEVNATIKEIAKSKGYTLVLQPQVALYAEDEGKD
                     ITEAVLDAIVKKHPEIKIEKPATEAQPATEKETKAEETKPEEAKK"
     gene            13972..14997
                     /gene="lpxD"
                     /locus_tag="PXE50_000148"
     CDS             13972..14997
                     /gene="lpxD"
                     /locus_tag="PXE50_000148"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HDL5621092.1"
                     /translation="MANFRLIDLAEHIGGTLRGNADLAIQSIAALDKADSSQITFISN
                     AKYRENLTACNAGAIIVSPADVEFCRADQNLIIVANPYVAYAQLAQYMDSTPKAASEI
                     HPSAVISPEAKLGNNVSVGANAVIESGVELGDDAVIGAGCFVGKNSKIGARTQLWANV
                     SVYHNVQIGADCLIQSSTVIGSDGFGYANDKGQWIKIPQTGGVIIGNRVEIGACTCID
                     RGALDPTVIEDNVIIDNLCQIAHNVHIGFGTAVAGGVIMAGSLKVGRFCQIGGASVIN
                     GHMEICDGAIITGMGMVMRPITEKGIYSSGIPLQTNKEWRKTAALVMNIDEMNKRLKS
                     LEKRFND"
     gene            15026..15484
                     /gene="fabZ"
                     /locus_tag="PXE50_000149"
     CDS             15026..15484
                     /gene="fabZ"
                     /locus_tag="PXE50_000149"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HDL5621093.1"
                     /translation="MTTENREPNIIEVTEIMDMLPHRYPFLLVDRVTDYEEGKWLKAI
                     KNVTFNEPCFTGHFPGAPIFPGVLILEAMAQATGVLAVATYGKLSEDELYYFAAIDNA
                     RFKRPVVPGDQLQLEVEFLKEVRGITKFTGKAYVDGKLVCEADLMCARRK"
     gene            15518..16312
                     /gene="lpxA"
                     /locus_tag="PXE50_000150"
     CDS             15518..16312
                     /gene="lpxA"
                     /locus_tag="PXE50_000150"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HDL5621094.1"
                     /translation="MRLIDSTAKISPLAIIEEGAEIGAHVEIGPFSVIGKDVKIGART
                     KIHSNVVINGMTEIGEDNHIFQFASIGEINQDLKYQGEPTKVVIGNRNRIRESVTIHR
                     GTVQGGGVTKIGDDNLFMINTHIAHDCSIGNRCIIANNGTLAGHVTLDDFVIVGGMSA
                     IHQFVVIGSHVMLGGGSMVSQDVPPYVMAQGNHARPFGINFEGLKRRGFDKPTMHAIR
                     KVYKLIYSSGKTLEECLVEIEQIAATEPAIAIFKQFFKRSTRGIIR"
     gene            complement(16350..18350)
                     /gene="mnmC"
                     /locus_tag="PXE50_000151"
     CDS             complement(16350..18350)
                     /gene="mnmC"
                     /locus_tag="PXE50_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase
                     MnmD/FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HDL5621095.1"
                     /translation="MGKLTFATLTFNDADTPVSEQFDDIYFSTQDGLAESYYVFQEGN
                     QLWEKWQSHPKEAFVIAETGFGTGLNFLAVADKFQQFRAAFPQSKLKRLYFISFEKFP
                     LTASQLADIHQRYPQFATLSENLTACWQPRQIGCQRYHFEQVYLDLWFGEIAENLPQL
                     GDLYSGTIDAWFLDGFSPDKNPEMWNEQLYLQMFRLSANGGSFATFTASSMVRRGLEA
                     AGFAVKKRKGFGKKREMLWGEKPLDSQVSEPNYPYFYAKNETADDIAIIGGGVASFFV
                     ALSLLEKGKQVTLYCKDETLAINASGNLQGAIYPQLSDDDERNVQFYIHSFDYALQRL
                     QQLKSNIEFEHNLSGVVLYAYDEKTAKKLEKMVEQTADDTLLKSCSQAELSEKLGLSV
                     PNSGAFIPQAGWLSPVQLVRNGFTWLEQKGLKIVLNHKVEHLTFSNGMWQWQTRGETV
                     RHQAVVLANGHTLNEFSQANGIPLYPVRGQVSQIPTTSELQKLKCVLCYDGYLTPMSA
                     YGTHCIGASHIRDNAETEFSLSEHWENVAKLQQNVTVCEWTQGIDLSENKAKVGIRAA
                     FRDRVPMVGAVHHFEQQKSQYANLYNQLRRKQAVENAEIFTNLYMVNGLSSRGLTTAP
                     LLGELLASLIVNEPVPISEDIWHNLSPNRAWIRKLLKGSTVA"
     gene            complement(18575..20011)
                     /gene="trpCF"
                     /locus_tag="PXE50_000152"
     CDS             complement(18575..20011)
                     /gene="trpCF"
                     /locus_tag="PXE50_000152"
                     /EC_number="4.1.1.48"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional indole-3-glycerol-phosphate
                     synthase TrpC/phosphoribosylanthranilate isomerase TrpF"
                     /protein_id="HDL5621096.1"
                     /translation="MQNIVQDNAQPNQPTILQKIVQDKAIWVAQKEQAFPLSEFQHKI
                     VKSDHDFYAALAKGTHQEPAYILECKKASPSKGLIRAEFDLDSIAQVYKNYAAAISVL
                     TDEQYFQGDFRYIDQVKRQTTQPILCKDFMISAYQVYLARFYNADAILLMLSVVNDET
                     YRELATLAHELGMGVLTETSTEAEFERALALGAKVIGVNNRDLHTLTIDMNRIVRLVE
                     KYQAQISADVCLISESGINDHQQVKNIKPYVHAFLIGSSLMGSADLNNAVRAVIFGEN
                     KVCGLTRVQDVKAVYEQGALYGGLIFAEGSPRQLSLRQAQELVVNAPLRYVGVFQNQA
                     VEFVEKMAKQLELFAVQLHGSEDEQYIAELAEKLGSKTQIWKALSVDVEVENLEFNDN
                     PQIARYVLDSKVGNQQGGTGKTFNWALIPETLKQKALLAGGIGTENIEQALAQGCVGL
                     DLNSGVESAKGVKDLQKLTACFGKIIQA"
     gene            20099..20410
                     /locus_tag="PXE50_000153"
     CDS             20099..20410
                     /locus_tag="PXE50_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqcC family protein"
                     /protein_id="HDL5621097.1"
                     /translation="MKSQVIQHLSYLEIALRVNQLWEATPPSPEALANEQPFCVETLT
                     PTQWLQWIFIPRMRAILDANADLPRNFAITPYLEEALKNEGYLQAICEPLLGLEKLLK
                     D"
     gene            20564..21292
                     /gene="truC"
                     /locus_tag="PXE50_000154"
     CDS             20564..21292
                     /gene="truC"
                     /locus_tag="PXE50_000154"
                     /EC_number="5.4.99.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(65) synthase TruC"
                     /protein_id="HDL5621098.1"
                     /translation="MTLDILYQDNSLIAINKPAGVLVHRSWLDKHETVFAMQTLRDQI
                     GQHVFPIHRLDRPTSGVLLFALNSETARIMSEQFEQHLVQKTYLAVVRGYLQGSAQID
                     YPLKVILDKIADKFSQEKEAQAAITDYKGLATVEMPYPVGKHQTSRYSLVELSPKTGR
                     KHQLRRHLKHLFHPIMGDSKYGDLHQNRALVEKSGVSRLMLHAHKLQFQHPKNLQKIE
                     IIASLDEQWQRLFAFFDWNFTQYY"
     gene            21310..21474
                     /locus_tag="PXE50_000155"
     CDS             21310..21474
                     /locus_tag="PXE50_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YoaH family protein"
                     /protein_id="HDL5621099.1"
                     /translation="MDNSLLSLTHEQQQAAVEEIQKLMAQGISAGEAIQIIANQLRDK
                     YQILEKSNNE"
     gene            21467..21943
                     /locus_tag="PXE50_000156"
     CDS             21467..21943
                     /locus_tag="PXE50_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621100.1"
                     /translation="MNKLWTVLALTITSHYSFAAAEKIVTKDLPAEGKPAVVLQVFDE
                     SEKIAKPIKGNKLFISKKQTRLCWHSINLPVQNKVTIAEAFYAPAAMKLASPGSKINS
                     SADKKNHTIITEINLANNQVLNRCWGFDKTDPVGKYKMEIQINDHIFKGLEFEIVK"
     gene            complement(21980..22831)
                     /locus_tag="PXE50_000157"
     CDS             complement(21980..22831)
                     /locus_tag="PXE50_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HDL5621101.1"
                     /translation="MENQKQAEIELKIMLEQQNVALVENYLNQTSPFPVLAHQTELLG
                     NTYYDTPEQFFATQKMGLRVRSVNQQYEITLKTQGEIVGGLHIRPEYNLALPNSQPDF
                     QTLVEKYQLPFENSEQIAESLQAIFSTDFTRKTWLVQVGMSDIEVALDQGIIKNHFGE
                     EPICELEFEIKQGNLGDLFTLVEAMPKADGMWLSNLSKAQRGYLLGQAVKWEQKIATA
                     MDGENSEKLTQLLADFICVGNESLEVLVRFNQCTQQQFSNWQQARAFVKSKDYLLHNL
                     TNLKTMI"
     gene            22892..24301
                     /locus_tag="PXE50_000158"
     CDS             22892..24301
                     /locus_tag="PXE50_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcjX family protein"
                     /protein_id="HDL5621102.1"
                     /translation="MFSKIHHKLNNFVQRGLDNHLRLAVTGLSRSGKTAFITSLVDQL
                     LHINKGGNSHLNLFAPARHGQILSVKRVEQGDLTIPRFEYDKNRQSLENQPPQWPEST
                     TGISEIRLAIRYQRQHSLLRHIKETGTLYLDIFDYPGEWLLDLPLLSLSYKEWSQTQQ
                     TIHKDERAELATPWLQAVKKLDLFAKTDENLLAEFSQQYTDYLLACKAQGMQYIQPGR
                     FVLPTENAKGAPVFQFFPLLDLSEAEWEKLEQSDRNSIFHTLKKRYEHYQKKIVKPFY
                     EDYFSQFDRQVILADCLTPLNYGYNEFMEMKLGLQQLFKHFHYGNRSLFHRLFSSNID
                     KLLFIATKADHITSDQVPNLESLMRQLVQEGGRHAEFDGIETGYLAISSIQATDAVKV
                     TQQDKIIKAIRGIRSSDRKQVTLYPGSVPNRIPDKNYWQFNRFEFDQFEPKQLDYSQA
                     IPHFRMDSVLQFLLADMFE"
     gene            24347..24697
                     /locus_tag="PXE50_000159"
     CDS             24347..24697
                     /locus_tag="PXE50_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5621103.1"
                     /translation="MNTVISQRKPIHWVGSTLDDIREFPDNIKRELGFDLDLVQQGLL
                     PRDFKAMANLGSGVMEIRVKDPSGAFRLVYLAKFKDAIYCLHAFQKKTQKTAPKDIAV
                     IKARYAAVKELENE"
     gene            24690..25013
                     /locus_tag="PXE50_000160"
     CDS             24690..25013
                     /locus_tag="PXE50_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HDL5621104.1"
                     /translation="MNNIDTKIRHTTEAQGNVFEDLGFPIDEAQKLKSASQQLIETKL
                     MLMNEMSNWIDKNNLKQSEAASILGVSRPRISDMVNGKLEKFTLDTLVTFVAKTGKTI
                     QLQLS"
     gene            25121..25600
                     /gene="smpB"
                     /locus_tag="PXE50_000161"
     CDS             25121..25600
                     /gene="smpB"
                     /locus_tag="PXE50_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HDL5621105.1"
                     /translation="MAKKPKVASNTIALNKRARHEYFIEDEIEAGLELQGWEVKALRA
                     GKGNISDSYVIFRHGEAFLFGAMITPLNMASTHIVSDPTRTRKLLLNKRELDSLFGKV
                     NREGYTIVATSMYWKNAWVKVKIGLAKGKKLHDKREDIKDREWQVAKQRIMKNANRG"
     gene            25803..27110
                     /gene="serS"
                     /locus_tag="PXE50_000162"
     CDS             25803..27110
                     /gene="serS"
                     /locus_tag="PXE50_000162"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HDL5621106.1"
                     /translation="MIDQNLLRTNLEDVATALKIKRNFILDVERVKTLEEQRKTLQVK
                     TETLQAERNTRSKNIGAAKARGEDISALLAEVDSMGNELDTAKVELDKVQAEIRELLL
                     SVPNLPADEVPLGKDDSENLEVLRWGEPRQFDFEVQDHVTLGENLNGLDFAAGVKLTA
                     SRFVVMKGKLARLHRALSQFMLDLHTEQHGYVETNVPFLVNHDTLYGTGQLPKFGEDL
                     FHTQPLTGQDPNEVQRPFGLIPTAEVPVTNLVRDEIIDEDSLPLRYTAHTPCFRAEAG
                     SYGRDTRGLIRMHQFEKVEMVQIVAPEKSMEALEELTGHAEKVLQLLGLPYRKVLLCT
                     GDMGFGAAKTYDLEVWLPAQNTYREISSCSNMWDFQARRMSARCKAKGDKKTRLVHTL
                     NGSGLAVGRTLVAVLENYQNADGSITVPEVLRPYMGGLEVITA"
     gene            complement(27169..27495)
                     /locus_tag="PXE50_000163"
     CDS             complement(27169..27495)
                     /locus_tag="PXE50_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621107.1"
                     /translation="MVSVDFKNNLLEFIFYGLFSEHTQTNIINGLQFYPKAGVAFRKD
                     LRFRKRAVYQREIMVFYQLDKIDEPKKVTIIAFRLGRMKNPIRLDTVQNRRVVTEIFM
                     NYPEKD"
     gene            complement(27488..27700)
                     /locus_tag="PXE50_000164"
     CDS             complement(27488..27700)
                     /locus_tag="PXE50_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621108.1"
                     /translation="MSIVIVDTDFVVHKEDEEWTTEEIKMIEEHLLEEQSAQYQVKRE
                     VPKQFYADIAERLSRGDLTAWEQLDG"
     gene            27887..30472
                     /gene="leuS"
                     /locus_tag="PXE50_000165"
     CDS             27887..30472
                     /gene="leuS"
                     /locus_tag="PXE50_000165"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HDL5621109.1"
                     /translation="MQQQYNPSEIEPKVQRYWAENKVFKAVKDVTKEKYYCLSMLPYP
                     SGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAVKNNTAPAKWTY
                     ENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVYKKTSTVNWCP
                     NDETVLANEQVHEGCCWRCDTPVEQREIPQWFIKITDYAEELLNQLDNLPQWPDQVKT
                     MQRNWIGRSEGVEITFKIAGSNVELPVYTTRPDTFFGVSYVAIAAAHPLAELAAQNNP
                     ALAEFIREAKNTKVAEAELATMEKKGMATGLFAIHPLTGKEVPVWVANFVLMHYGTGA
                     VMAVPAHDERDFEFAQKYDLQINQVIQPLDGSEWDFSKAAYTEHGKLINSAEFDGLEF
                     DVAFTAIADKLEAMGVGKRQVNFRLRDWGVSRQRYWGAPIPMMTTEEGEVVTVPLQDL
                     PVILPEDVVMNGVQSPIKADPEWAKTTYNGKPALRETDTFDTFMESSWYYARYTCPQY
                     HEGMLDSDEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGILNSDEPATKLLCQ
                     GMVLADAFYYTSPTNERIWVSPTQVTLERDEKGRIIKATDPQGRELVHSGMTKMSKSK
                     NNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEGAKRFLGRVWNLVYSYAQ
                     NPATTALDVNALDKDQKELRRDVHKTIAKVSDDIGRRQTFNTAIAAVMELMNKLTKAP
                     LETEQDKAVMAEALSAVVRMLYPITPHICFELWQVLGNEQTIDFAPWVQADESAMVED
                     EKLVVVQVNGKVRGKITVSATATEDEVKAIAKADPNVAKFLDGQQIVKEIYVPFKMLS
                     FAVKA"
     gene            30672..31160
                     /locus_tag="PXE50_000166"
     CDS             30672..31160
                     /locus_tag="PXE50_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621110.1"
                     /translation="MIKKLSLIAVFALTACGWHFKNNEVLPESFRTLTFESADQHSEM
                     SRILRNQLQLSDVKLVPSTANVAKLRLVSTSTDSKVVSVFKQAREAEKILTLNVDAIA
                     DIPNKGQYPLEVSVHRTFFDDSRAALAKSAEKEMIMKDMYEQASRQLIIKMAGLKKEL
                     SK"
     gene            31203..32228
                     /gene="holA"
                     /locus_tag="PXE50_000167"
     CDS             31203..32228
                     /gene="holA"
                     /locus_tag="PXE50_000167"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HDL5621111.1"
                     /translation="MQKIFPETLQFSLNKGLQPFYLLTGNDLLLVNETKDAIIHTARL
                     NGFDEKKEVEIKNDTNWEELFEAAQSMGLFFARQIMVLNFPDSPTATQFKKLAELCAF
                     IHSDLLFILHLPKFSKTMEKQAWFTQIELNLVQINCQTPELSKLPQWVSHRAKAMNLQ
                     IENEANQLLCYSYEGNLLALKQALQLLQLNATDGKITLTKAQEVVEHSAQFTPFQWID
                     ALFEGKIQRAQRILYHLQNEEVQAVVLLRIVQKELMILLEITRNPTAVVSSEQSLFIG
                     NLRTEFDRLKIWQNRRPFYNQITQRLTYQKLYALIQQLAELERKVKQEFSDDIWQELE
                     RFSAQFT"
     gene            complement(32229..32414)
                     /gene="yacG"
                     /locus_tag="PXE50_000168"
     CDS             complement(32229..32414)
                     /gene="yacG"
                     /locus_tag="PXE50_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HDL5621112.1"
                     /translation="MPETIVNCPTCEKEVVWSKESKYRPFCSERCQIIDLGDWAAEKH
                     SIASEEAELFSEDLEKY"
     gene            complement(32396..33031)
                     /gene="coaE"
                     /locus_tag="PXE50_000169"
     CDS             complement(32396..33031)
                     /gene="coaE"
                     /locus_tag="PXE50_000169"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HDL5621113.1"
                     /translation="MTYVVGLTGGIGSGKTTVSDLFSALGVEVIDADVVARQVVEPGT
                     PLLAKIVEHFGEEILTAEKALERTKLRQIVFNNEEEKTWLNNLLHPAIREEMVKKLQE
                     STACYVIWVVPLLIENKLTEYCDRILVVDVSPEIQLERATKRDNSKIETIKNIMAAQV
                     SREERLSYADDVIENNLPFEQGLLLIKEQVQALHYKYLALAKKEKECQKLL"
     gene            complement(33067..33723)
                     /locus_tag="PXE50_000170"
     CDS             complement(33067..33723)
                     /locus_tag="PXE50_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HDL5621114.1"
                     /translation="MLILFSLFIAVWLKAEIPRFAIRVNRQIYQETTSLVNIGLTEQQ
                     FLAQSVLQPKQPRSANLFFLLFPLIMLCSESPIIGTIFILLCFLSLLDMCYYLTDIRY
                     LVLIFLLVLWESLADFQHQTFTFTLAFCLLIGLVSQLMFKKEAFGSGDMLLLVALSPL
                     FRLEKMLLLILTASLLGIGYYLAYWLMKKQKLAKLAFIPFISTAMLLVLMLESRGINY
                     "
     gene            complement(33726..34922)
                     /locus_tag="PXE50_000171"
     CDS             complement(33726..34922)
                     /locus_tag="PXE50_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HDL5621115.1"
                     /translation="MTKIYEFHWQAQSRFGQKQRGKRLATNRDMLENLLLAQGYQHIR
                     ISRNFVLSANPKKEEVNSLLSQLALLVNSAMPLKQALSMLLQNCRNIRLYLWLNELIQ
                     HIESGYAFSQSLEKLGEFVTNQEIQLIKMGEQSGKLGIMLTNLAESRAKLEKLAKKVK
                     KILFYPVIVLLISLALSIGLLVLIVPQFAQLYGSKDKTLPLITDILFTLSECLIEQGT
                     VLLGTLLLAVIFYLFFAKKSRLVAKWKMALWAKMPLFSRIIEQSRIIFFSQNIALMLN
                     AHIPLDVALRSFLSEKNDDPILQQEIGTMLNLLQQGYKFSQGINPNVFGAEMAQMLEV
                     GEKSGNVAKMCEHISEMYQQKLDYQIDILSQLLEPMLMLIMGVIVGTIIVGLYLPIFD
                     MGALVE"
     gene            complement(34919..35371)
                     /locus_tag="PXE50_000172"
     CDS             complement(34919..35371)
                     /locus_tag="PXE50_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilB"
                     /protein_id="HDL5621116.1"
                     /translation="MEYSVTDLNSQRFIEISAEQWQKNCNEKQILLRYLAIPLQETEE
                     QLWLGIDDMQNLNACEIFAFIYHKQIEPVLISSDELKFLLNALSPEQSSRQSEIYEEN
                     TAYSLAHSEQVDRNDPIIQILENLFKFCLQHNASDIHFEPQKEKLLRQ"
     gene            complement(35392..35871)
                     /gene="ppdD"
                     /locus_tag="PXE50_000173"
     CDS             complement(35392..35871)
                     /gene="ppdD"
                     /locus_tag="PXE50_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent pilin"
                     /protein_id="HDL5621117.1"
                     /translation="MQKIVHFRPLGIRQLHRAFTLIELMIVIAIIAILATIAIPSYNS
                     YTQKAALSELLQASASYKSDVEVCIYNSGGLDNCSGGTNGIQANKTSSNTTKYLNSIA
                     VTKGVITVTGKGSLNGYGYTLTPSFSNNTISWTASCSGNDTSLFPANFCSTTVTPNG"
     gene            36052..37431
                     /gene="radA"
                     /locus_tag="PXE50_000174"
     CDS             36052..37431
                     /gene="radA"
                     /locus_tag="PXE50_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HDL5621118.1"
                     /translation="MAKAPKTAYVCNDCGAEYSRWMGQCKECKAWNTISEVRLISSKE
                     AAKSDRFSGYAGETSGKVQTLSDISLQEVPRFSSGFNELDRVLGGGVVPGSAILIGGH
                     PGAGKSTLLLQVMCGLAQHLPTLYVTGEESLQQVAMRANHLGLPTANLKMLSETSVEH
                     ICNIADQEKPKIMVIDSIQVMHLSDIQSSPGSVSQVRECASFLTRYAKTRQVAIIMVG
                     HVTKDGTLAGPKVLEHAIDASLLLEGESDSRFRTLRSQKNRFGAVNELGVFAMTEQGL
                     KEVKNPSAIFLSRSEEQTPGSSVMVLWEGTRPLLVEIQALVDHSMLANPRRVAVGLDH
                     NRLSLLLAVLHRHGGLQMSDQDVFVNVVGGVKVTETSADLALILALISSFRNRPLPQD
                     LVIFGEVGLAGEIRPVTSGQERISEAAKHGFKRAIIPHGNVPKKAIKDMQVFTVKKLS
                     DALDILYNL"
     gene            complement(37486..37716)
                     /locus_tag="PXE50_000175"
     CDS             complement(37486..37716)
                     /locus_tag="PXE50_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgjV family protein"
                     /protein_id="HDL5621119.1"
                     /translation="MDYVEILGYVAMILVACSFLLKDVIKLRVVNSLGCACFVVYGLL
                     IGSIPVTGLNALVVCINLYYISKGNRPTAAHS"
     gene            complement(37836..38330)
                     /gene="folA"
                     /locus_tag="PXE50_000176"
     CDS             complement(37836..38330)
                     /gene="folA"
                     /locus_tag="PXE50_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 dihydrofolate reductase"
                     /protein_id="HDL5621120.1"
                     /translation="MKISIIVARTINKVIGKDNQMPWHLPVDLAWFRQNTLGKPVIMG
                     RKTYESIGRLLPKRPNIILSRSGFTVEGAYAVQSLEQAVELAKNFANTAEIMIIGGGE
                     LFKQALPLAERLYLTEIQADIEGDTFFEFDEQNWALVEEKWSEIDENNPFRCRFMCLE
                     RKSV"
     gene            38406..38561
                     /locus_tag="PXE50_000177"
     CDS             38406..38561
                     /locus_tag="PXE50_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl kinase"
                     /protein_id="HDL5621121.1"
                     /translation="MATLFLVTSEQIMSKTIVIKFGTSTLTHGTKSLSRPYMLELVKL
                     NYTNSIV"
     gene            38558..39526
                     /gene="proB"
                     /locus_tag="PXE50_000178"
     CDS             38558..39526
                     /gene="proB"
                     /locus_tag="PXE50_000178"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HDL5621122.1"
                     /translation="MIVVTSGAAAAGRDYLGHPELPKTLASKQMLAAVGQSQLIRVWE
                     NLFDIYNIHIGQMLLTRADLDDRERFLNARDTLDALLAQKIIPVINENDAVATEEFKV
                     GDNDNLSALVAILAQADQLYLLTDQEGLFSADPRSNPDAKLLSVVEKITPEIRQIAGG
                     SSTGLGTGGMSTKITAADIATRSGVETIIASGSRPNVLVDLANGQNIGSKFLVQSDRL
                     EGRKRWLFAAPQVGEIVVDFGAEQALLQHKSLLPVGVSAIKGEFTRGEVIKIFSQDGK
                     ALALGIARYSSEALLRIKGKKSKEIESLLGYEFGSVAVHSDEMVVY"
     gene            39526..40290
                     /locus_tag="PXE50_000179"
     CDS             39526..40290
                     /locus_tag="PXE50_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HDL5621123.1"
                     /translation="MELGIDVLAILFAVATLAGFIDAIAGGGGLLTIPALMAAGLPPA
                     MALGTNKLQACGGSLSSSLYFIRKKAVNLKQIWLLILCTFLGSAAGTIFVQMINVDFL
                     KTLLPFLILIIGIYFLVSPKIGDEDRKQRISFTLFAFTAAVALGFYDGMFGPATGSFM
                     TLAFILLLGFNLSKAVAHAKVINFTSNFASLIFFTLGGAVMWKIGLIMMVGQFIGGTL
                     GAKMVMTKGKKLIRPMLVTMSFMMVGKMLYEQGIFN"
     gene            40293..40925
                     /gene="nth"
                     /locus_tag="PXE50_000180"
     CDS             40293..40925
                     /gene="nth"
                     /locus_tag="PXE50_000180"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005721589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HDL5621124.1"
                     /translation="MNKAKRIEILTRLRNENPKPTTELNYSNPFELLIAVILSAQATD
                     KGVNKATDKLFPVANTPQAILDLGVDGLKEYIKTIGLFNSKAENIIKTCRDLIEKHNG
                     EVPEDRDALEALAGVGRKTANVVMNTAFGHPTIAVDTHIFRVSNRTNFAPGKNVVQVE
                     EKLLKVVPDEFKVDVHHWLILHGRYTCIARKPRCGSCIIEDLCEFKEKTE"
     gene            41122..42372
                     /locus_tag="PXE50_000181"
     CDS             41122..42372
                     /locus_tag="PXE50_000181"
                     /EC_number="2.7.7.72"
                     /EC_number="3.1.3.-"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional CCA addition/repair protein"
                     /protein_id="HDL5621125.1"
                     /translation="MDIYLVGGAVRDQLLGLPVKDRDFLVVGATAEQLLAQGFQQVGA
                     DFPVFLHPETKEEYALARQERKNGNGYNGFICDFSPNVTLEQDLIRRDLTINAIAQDE
                     NSTLFDPYGGVQDLENRLLRHVSPAFSEDPLRVLRVARFAARFHSFGFTIAPETLKLM
                     REMVQSGELKHLTAERVWLETQKAFETDNPHVYFDILRLIGALKVLFPELDRLFGVPQ
                     PPQHHPEIDSGKHTLMVLQQAKRLAKKAENPTALLFAALCHDLGKGLTPADILPHHYG
                     HEVKGIQPTRELANRLKIPTEIKDFALLVTEYHTHCHKMAELRPETVIKLFNSLDVWR
                     KPNRFFDFLFACEADARGRLGFEQRNYPQPELAKKYYQAAIEIDVQQVIQDGFEKQAI
                     REELNKRRVYAVRSIKLDSDLINH"
     gene            complement(42473..43408)
                     /locus_tag="PXE50_000182"
     CDS             complement(42473..43408)
                     /locus_tag="PXE50_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TDT family transporter"
                     /protein_id="HDL5621126.1"
                     /translation="MSESKPFPITTGFFAMPLGLGALGLAWLNATPITPYATTIGNII
                     AGTSVILWVALLGCYVYRVFFCFEQIKAEFMHPVQCCLFSLVTMTTMISGDVLYVWDF
                     YLGELLIFLGVIVHLIFLVFIIGGLWKGTQFLPETLHPVHYLPPIAGSFTMASSLSLI
                     GYSEIASLFLGIGIISWLVYEPTMLQRIRLSPLFPIARPSLGIVLAPAFVGASAYFSM
                     GGELDLLAKMLWGYGFLQFCFILRNLKWIAENGFSMGFWAFSFGLAAMARGAIEFYQF
                     EPLSFIGLAGFTIANFGIGLLLIFTLKLWLQQSRA"
     gene            complement(43537..43731)
                     /gene="iscX"
                     /locus_tag="PXE50_000183"
     CDS             complement(43537..43731)
                     /gene="iscX"
                     /locus_tag="PXE50_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005656371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HDL5621127.1"
                     /translation="MKWTDTRMIAENLYDMNPDLDPTTVRFTDMHKWICEMEDFDDDP
                     EASNEHILEAILTIWLEEYE"
     gene            complement(43731..44072)
                     /gene="fdx"
                     /locus_tag="PXE50_000184"
     CDS             complement(43731..44072)
                     /gene="fdx"
                     /locus_tag="PXE50_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006717450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HDL5621128.1"
                     /translation="MPKIVFLPHEEFCPEGMVVEAKAGDNLLEVAHEAGVEIHHACDC
                     SCACTTCHVVIREGFDSLNDTSDQEEDMLDKAWGLEIDSRLSCQCIVGEEDLVVEIPK
                     YNLNHANEAAH"
     gene            complement(44091..44456)
                     /locus_tag="PXE50_000185"
     CDS             complement(44091..44456)
                     /locus_tag="PXE50_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 51 family protein"
                     /protein_id="HDL5621129.1"
                     /translation="MSNYVKTEISEQFRTVAVEFDLEDNRIFELGERINTEYDVAYMN
                     GYNWAAFLRAYLSIYRPSLLELLEEDPDVGCYYVTYPLSEKSKEKARELKKIIVYLVE
                     NEEEILNFIGEHLDNIEWD"
     gene            complement(44466..46319)
                     /gene="hscA"
                     /locus_tag="PXE50_000186"
     CDS             complement(44466..46319)
                     /gene="hscA"
                     /locus_tag="PXE50_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HDL5621130.1"
                     /translation="MALLQISEPGQTAAPHQHKLAVGIDLGTTNSLVATVRSGQTQVL
                     LDEQERALVPSVVHYAETEKTVGIEAFAKAALDPKNTVISAKRLIGRSLADVQQRYQN
                     LPYQFVASENGLPLIQTAQGNKSPIEVSADILSHLAQFAEKRLAGELSGVVITVPAYF
                     DDAQRQSTKDAARLAGLNVLRLLNEPTAAAIAYGLESGQEGVIAVYDLGGGTFDLSIL
                     RLRKGVFEVLATAGDTALGGDDFDHLLAEWIAEQANYKPQTASEQRELLTLATQTKVA
                     LSQAVEFEVKFANWTGVVSRSQFNELIQPLVKRSLMTCRRALKDAGVEAEEVREVVMV
                     GGSTRVPFVREQVGEFFGKTPLTSIDPDKVVAIGAAVQADILVGNKPDSDMLLLDVVP
                     LSLGIETMGGLVEKIIPRNTTIPVARAQEFTTGKDGQTAMTIHVLQGERELVEDCRSL
                     GKITLRGIPAMAAGVAQVRVTYQVDADGLLNVTAMEKSTKVQASIQIKPSYGLTDEEV
                     TQMIKSSMANAKEDMEARQLVEQRVEADRVIDSVVTALKEDGSAVLSVEEFQAIEAQL
                     ARLIELKEGTDRFAIQQGIKEVDLATQEFAARRMNLSIQKALAGKKMDDLA"
     gene            complement(46635..46976)
                     /locus_tag="PXE50_000187"
     CDS             complement(46635..46976)
                     /locus_tag="PXE50_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease domain-containing protein"
                     /protein_id="HDL5621131.1"
                     /translation="MKAILCQRAKQLRTNMTEAEKVLWQALRAKRFLAIKFKRQQVIG
                     NYIVDFVCFSAKLVIELDGSQHLDQQNYDNLRTHFLNGQGFRVLRFWNNQIHSDLEAV
                     LDTIFYEITRG"
     gene            complement(47124..47756)
                     /locus_tag="PXE50_000188"
     CDS             complement(47124..47756)
                     /locus_tag="PXE50_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2625 family protein"
                     /protein_id="HDL5621132.1"
                     /translation="MKNLEQLLDKQSAWLILRDWFTQAKNHYEILASYPEDAGSALVG
                     MQLSTRSPLGAMVYETGGVFIDHGWLRILGSGNEKLPRGLFDWNFGKTFKQSGEQPSH
                     LLVADDAIGGYFAINAGGIGSDLGKVYYYHPKAKKWENTQLGYSEFLGWALAGDLNHF
                     YQDLRWENWQTDVEKLQGHQVLDLTSKIAVPIERHYQGEFAPENMGYSVA"
     gene            complement(47810..48331)
                     /gene="hscB"
                     /locus_tag="PXE50_000189"
     CDS             complement(47810..48331)
                     /gene="hscB"
                     /locus_tag="PXE50_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly co-chaperone HscB"
                     /protein_id="HDL5621133.1"
                     /translation="MNNPFTLFDLPVQFQLDNAQLSERYLALQKQLHPDNFAHKSSAE
                     QLEAVQKSADVNEALNILKDPILRAEAMIEIHTGEAKNLEEKSMRDVDFLMQQLEWHE
                     KLETIEHRKDETELTVFLKQIKAEQKAVLEQLEQTLNTADWQKANALTDKLRYFKKLI
                     IQIEKVEEKFFDY"
     gene            complement(48341..48664)
                     /gene="iscA"
                     /locus_tag="PXE50_000190"
     CDS             complement(48341..48664)
                     /gene="iscA"
                     /locus_tag="PXE50_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HDL5621134.1"
                     /translation="MSITLTEAAANRVRTFLENRGKGIGLRLGVKTSGCSGLAYVLEF
                     VDVLNEDDQVFEQHGVKVIVDEKSLTYLNGTQLDFVKEGLNEGFKYTNPNVKNECGCG
                     ESFSV"
     gene            complement(48773..49156)
                     /gene="iscU"
                     /locus_tag="PXE50_000191"
     CDS             complement(48773..49156)
                     /gene="iscU"
                     /locus_tag="PXE50_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HDL5621135.1"
                     /translation="MAYSEKVIDHYENPRNVGTFDKEASDTGTGMVGAPACGDILRLQ
                     IKVNDQGIIEDARFKAYGCGSAIASSSLITEWVKGKSLEEAGAIKNSDIAEELELPPV
                     KVHCSILAEDAIKAAIADYKEKQAK"
     gene            complement(49283..50503)
                     /locus_tag="PXE50_000192"
     CDS             complement(49283..50503)
                     /locus_tag="PXE50_000192"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017459011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IscS subfamily cysteine desulfurase"
                     /protein_id="HDL5621136.1"
                     /translation="MKLPIYLDYAATTPMDERVAKKMMEYMTKDGIFGNPASRSHKFG
                     WEAEEAVDVARNQIADLIGADSREIVFTSGATESDNLAIKGAAHFYQTKGKHIITVKT
                     EHKAVLDTCRQLEREGFEVTYLDPEEDGILDLAKLKAAIRPDTILVSVMHVNNEMGVI
                     QPIKEIGAICRAKKIIFHVDATQSVGKIEVNVQDLNVDLMSFSSHKLYGPKGIGGLYV
                     CRKPRVRLEAIIHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMARLTVLRDR
                     LYNGFKDIEEVYVNGSMEEGKRIGSNLNISFNFVEGESLMMSLRDIAVSSGSACTSAS
                     LEPSYVLRAIGRDDELAHSSIRFTLGRWTTEEEIDHTIEIVKKAIVKLRELSPLWEMF
                     KEGVDLSKIEWNHH"
     gene            complement(50558..51010)
                     /gene="iscR"
                     /locus_tag="PXE50_000193"
     CDS             complement(50558..51010)
                     /gene="iscR"
                     /locus_tag="PXE50_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HDL5621137.1"
                     /translation="MKLTSKGRYAVTAILDIALHGKLEPVSLADISDRQAISLSYLEQ
                     LFAQLRRDGIVQSVRGPGGGYQLGKKPEEISVGMIISAVNENIDVTKCKGSGNCRKDS
                     QCLTHSLWERLEDQIEQFLGTISVADLAAEHADHDCEKEHCHDHPHHH"
     gene            51358..52839
                     /locus_tag="PXE50_000194"
     CDS             51358..52839
                     /locus_tag="PXE50_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein transport protein"
                     /protein_id="HDL5621138.1"
                     /translation="MKMKNFSKTLIASLVAFSSAGASAAAFQLAEISTSGLGRAYAGN
                     AAVADNASVVATNPALMTLFKQTEISAGGIFVDADVNIDGKLNATGADASHKNVIPTA
                     IVPNAYIVSPINERLSIGGGVNVNYGLISEFDPNYSAGFLGGRTSLSAVNVNFSAAYD
                     LGYGFVLGAGLNAVHAKAELGRFLGAGAARFAPAKQFLEDKKVQVQSAIQGLKALEAG
                     IAAGNTALEAQKTQVLAQVNGLLKSQNLNQTITNSAQLERLVNGIQNTNASSTIHKLK
                     GDKWALGWNVGLVYNINERNRLGFTYHSEIDLKFKGKYSNTVPVVIPKMVDTITGGAE
                     IDGTLRLRLPAFWEVSGYHKLTDKLAAQYSYKRTDWSKFQSLEAYDMQGNRLLHKTEN
                     FNDSQRIALGLSYDVNEMLTLRTGVAFDESASVTHPSISIPDTDRAWYSVGATVRFTP
                     NLSADVGYSHLRGSNLTFSEDGLATFKSKARANLYGLNVNYKF"
     gene            52906..53460
                     /locus_tag="PXE50_000195"
     CDS             52906..53460
                     /locus_tag="PXE50_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HDL5621139.1"
                     /translation="MKSQIYYDYYPSPIGQLLLLATEEGLIYIELGQEQQTTSLDNFL
                     SAQAASGQILEIFCKTKEILDRYFAGEPLDFQQLDFLAPQGTPFQQSVWKILREIPYG
                     QTTTYGEIATQLGKPSAMRAVGGAVGRNPISILVPCHRVLGKNQALTGFGGGLPNKRF
                     LLQLEDITYKDKGIEFVKPKTKKW"
     gene            complement(53556..55406)
                     /locus_tag="PXE50_000196"
     CDS             complement(53556..55406)
                     /locus_tag="PXE50_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDL5621140.1"
                     /translation="MQVKKFSQKYINWVLKLGRLKASLLGFFMVALSAILIQSSLTYL
                     FIGRVVVVDILRSIAFGLISAPFVLYFFTLLVEKLEISRLKLEKAVRDLEELREQDAY
                     LNAKLEKNSRDKSILMATISHELRTPLNGIIGLSQILLDDKTTEKQQEYLKTINMSAT
                     ALAHIFGDIIDLEKIDSSRIELVRKEVEFEQLIHDIANFGHFMAGNKQINFEVKYPPD
                     LPKYIYIDHARLSQILWNLISNAVKFTPASGRILLEIYQLDKEQFSFAVTDSGIGIPE
                     KDQRKIFDMFYQAENSKEKKAQGSGIGLSVSKRIAKLMGGDLVVASQENQGSTFTLTV
                     QAESTETKPIFAIQQHSLKVLLVEDIEMNVVVARAMLEKIGCVVDVAMSGEETFQHFA
                     QNSYDLILLDIQLPDTTGFEIAQQLRLQYENEEIDYLPLLVALTANVIQSRQEYQAQG
                     MDDVLHKPLSLDELMRCLNQHFGDDFLQKNEEKQPLVERGSENLPYSITILNELIGVM
                     GKENVLANMDLFADLMPTYLANLQRYLSDWQTTNSVESRKLTADEAHKIKGALASVGL
                     HQLQQTAQLAQSDNGEQWEQNIAHWVEMICSKWQMDLQLAKEYVRSKGDI"
     gene            complement(55461..56465)
                     /locus_tag="PXE50_000197"
     CDS             complement(55461..56465)
                     /locus_tag="PXE50_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDL5621141.1"
                     /translation="MPGDANKIISNGTSAGGALSTLLGASADHYDYEPYLKEAGALNA
                     SDKIFAVSAYCPITNLENADMAYEWQFNGVNEYSRIDMSRLNAAEFNDRSKPKPKPKI
                     EGSLNEAEIKVSNELAERFPTYLNSLHLVDEKGNPLTLDPKGNGSFKDYLSEVVKTAA
                     NKAYRGLVQDSEEQKAFQQISWLSFEKGKVSSVDWFGYVFSDKRMKSPPAFDALNGSS
                     GENNLFGTDTENNRHFTLYSAERSANKDLNLADPQIVKRMNPMHYLDNPNAAEHWRIR
                     VGTADRDTSLAISAILAIKLQMAGKNVNYETPWNVPHSGDYDVNELFLWADELVKGKK
                     "
BASE COUNT        17219 a        11962 c        11097 g        16626 t
ORIGIN      
        1 aaaaagattt tttggatttt actgatcgcc atgcttgctg ttggcggtta ttctttaaca
       61 aaatacaacg atttaatgcg tgcagaagaa gacatcaact ccgtatgggg aaatgttgaa
      121 tcggcttacc aacgccgtgc ggatttaatt ccaaacttag tgaataccgt aaaaggtcag
      181 gctaactttg agaaagaaac tttaacctct gtgattgaag ctcgtgcaaa agcaactgcg
      241 gtaaccattg acccaagcaa tgcaactgaa gagcaaatgg ctaaattcca agaagcccaa
      301 caaggtgtaa actctgctct ttcacgctta ttggtttcag ttgagaaata ccctgaatta
      361 aaagcccacg aagcgttttt aaatctacaa gctcaattag aaggtacgga aaaccgcatt
      421 aacgttgaac gcaataactt taacgaaaaa gtgaaagagt acaacaagca agtgcgtgaa
      481 ttcccgacta aattagcggc aatgattatg ggctttaaag caaaaccgca atttaaatct
      541 gaagcaggtt ctgataaagc accaaccgta aacttcaact aattttagtt tcaatttatt
      601 catattaaaa gcaataagct ctttcaaatc cggtgcttat tgctttattt ttaaggggaa
      661 caaatgggat tattttcttt tctctccaac aaattaccga tagatacgca acgcattgaa
      721 caagcaattg ccgatttaga gcaaaaaacc tctgccgaat tgcgtgtggt ggtggaacga
      781 aaagccaaaa tcggcaaaac cgacaacgcc gctatgttgc gagcaagtga gcttttcgat
      841 gaattaaaaa tgcgtgaaac ggctgaacat aacggtgtgt tgatctacct ttcattcaag
      901 cctcactacg ctgcgattat tggcgatgaa ggcattcatc aaaaagtcga taacgatttt
      961 tggcaaaaaa tctatgccac aatgtgtttg gactgccaac aaggcgatta cacccaagcc
     1021 atttgtgatg caatcaaaat ggtggaagct ccgctcgctc accatttccc ttatcaggct
     1081 gatgataaaa acgagctttc aaacgaggtg gtagtcaaat gatgaaatcc ctttgcaaat
     1141 ttctatctat tttcaaccgc ttgttattgg tgtgcttggc tctgtttagc ctaaatgcca
     1201 cagcggtgac ctacccagag ccgcctaatc cgttttatta tattacggac tacaccaaaa
     1261 acaccttgag ccaacaagaa tggcggacat tagaagatgc cttaattgct aactgtgcca
     1321 agacaagttc gcaaattgcc gtggtgatta ttccaagcac ggaaggcgag gcagtttcaa
     1381 cctatgctca taccctgttt aacaaatggg gaatcggacg gagcaaaaat aacgagaaca
     1441 atggtatatt gttattaatt gccaaaaatg atcgcaaact ctttattgcc accggacgtg
     1501 ggcttgaagg agcgttacct gatgcgattg catcgagcat tatccgcaat gacatcacgc
     1561 cattcttcaa acaagagcaa tatgcagccg gtatcgccca tggcttatcc gccattatgg
     1621 cagccattaa cggggaatat gccccttatg caagttatgg cgaagaaatg caagaatttg
     1681 atgacataga cggcttactc tttttcttgt ttgccggcat tgtgattttc ctaattttcc
     1741 gcccacgagg aaacagtacc tatattagtc ccagctcaat ggatcaacta ggacaaatac
     1801 taagagaaag ccaacgcaga ggtgggggct ttggcggtgg tctcggaggt ggctttgatc
     1861 gaggctcagg tggatttggc ggaggcttcg gtggtggttt tggcggaagc agaggcagtg
     1921 gcgacagctt cggtggtggt tcatcaggcg gtggaggcgc tggaggaagc tggtagtttc
     1981 cgcccaattt aaaacaatac aagcggtcat atttctcaaa aaaattgcgt atttttcgct
     2041 aaacgcacaa aacgctaatg aaaataagac cgcttcctca cttctctaag ctatgccctt
     2101 tttagtaaca atgctacggc ttcacaagct atgccttcac ctcgcccggt aaaccctaat
     2161 ttttctgttg tagtggcttt tacattcact tgtgatatat cgcattgtag atcgtctgcg
     2221 atcacctgtc tcattttatc aatatgcggt cgcatcttcg gagcttgagc aataatggtt
     2281 acatcgacgt taccgacttg atagccctgt tcttgcactt gtcggtaagc ttcaatcaac
     2341 aaaccacgac tatcggcatt tttgtattgc atatcagtat cagggaataa tttgccaata
     2401 tcacctaaag ctgctgcgcc aagcaacgca tctgttaaag cgtgcagcgc tacatctccg
     2461 tcactatgcg caatgaagcc tgtatgataa ggcacttcaa ccccagcaat catcagtggt
     2521 ctatcttcgc caaaagcgtg aacatcaaaa ccgtgtccaa tacgtatcat tttagttctc
     2581 caaattatgt gtaaggtaaa attccgctaa ggctaaatct tcagggcgag tgattttgat
     2641 attatcactt ctacctgaaa ccaattgtgg ctggtagcct gcaagctcca ttgcagatgc
     2701 ttcgtctgtt acctgaagct tattggcaaa agcagaggat aatgcttgtt ttaatgcttg
     2761 agcaggaaaa aattgtgggg ttaaagcgtg ccataaggtt gagcgatctt ctgtgtgtgc
     2821 gattttcgtg ccgtttgctc ttttcatcgt atctaccgct ggaatggcga gaatgccacc
     2881 ttgcggatcg ttaatttgca aaagtttatc taaatctgac cgcttgaggc aagggcgagc
     2941 cgcatcgtga actaatgccc aagcattttc agtgttgatt tcctgtaagg catttagcac
     3001 tgaatctgct ctcgtttctc ctccaaaaac aagttggatc ttaggggatt ttaggagttc
     3061 caatgtggaa taaaaagggt cttttcttgc caccgctaca atcacttttt caacatgagg
     3121 gtgttcaaga aaaatagaca ctgtatgctc taagatagtc ttacccttta attgtaaata
     3181 ttgttttggt ttttctgctt gcatccggct accaactcct gacgccggaa ttactgcaat
     3241 aatttttcgc ttcataatat atcaattatg tattatttgt tttttggtac aattcggtag
     3301 aacatctcgt tctcttttac catttctcgt tcaagtcttg ctctctcttc aagtgcatct
     3361 acgccgttct ttaaatcgta aatttcggct tcaattagtt tattgcgtga agtaagcttt
     3421 gtgttttcta cttttaataa agcaatttct tcttgcactt cttgataatc actccaacca
     3481 ttttttccaa accaaaagct atattggaaa aagccgagta atagggcaaa aaaagtaatt
     3541 aataaacgca tttattttct cttatatgaa atagtaatga actaagcggg ttgattttac
     3601 cttgaatttg caaaaaattc taaaaatctt accgcttgtt acttaaacag gcgatggata
     3661 gtgctaaatg tattcgaaaa attgatataa aacaaacaaa tgcgtatttt aaagcgattt
     3721 ttttaaacta aatgtcaaaa atttgaagta tgtaacattt tttatttttc aattttcgta
     3781 taatcaaccc agttttaaat ttataactat tatgaggtaa ccactatgtt aaatcgtatt
     3841 gaacaagaac ttgcagactt aggcattaca aatgtaaaag aaatcgtgcg taaccctagc
     3901 tatgagcaac tgtttgaaga agagatgaaa tcggatctta aaggttatga aaaaggcgtc
     3961 ctaacaaatt taggcgcagt agcggtagat accggcattt tcacggggcg ttcgccgaaa
     4021 gataaatata tcgtattaga tgaaacgaca aaagataccg tctggtggac atctgatgca
     4081 gctaaaaatg ataataaacc gatgactcaa tctacttggc aaagtttaaa aaccttagtg
     4141 accgatgagt tatctaataa gcgtttattt attattgatg ctttctgtgg tgcaagccct
     4201 gagcatcgca tcaatgtgcg tattattacc caagttgcgt ggcaagctca ctttgtgaaa
     4261 aatatgttta ttcgtccaac agaagaagaa ttaaaagatt tcaaaccgga ttttgtggta
     4321 atgaacggtt cccaagtaac taacccgaac tggaaagagc aaggcttaaa ttcagaaaac
     4381 tttgtggcat ttaatatcac agaaggtgtt cagatcattg gcggtacttg gtacggtggt
     4441 gagatgaaaa aaggtatgtt ctctatgatg aactacttct taccattaaa aggtgtcgct
     4501 tcaatgcact gttcagccaa tgtgggcgaa gaaggtgatg tggcggtttt ctttggttta
     4561 tcaggaaccg gtaaaacgac actatcaacc gatccgaaac gcaaattgat tggtgacgat
     4621 gaacacggtt gggacgaaaa cggcgtattt aactatgaag gtggttgcta tgcgaaaacc
     4681 atcaaccttt ctattgaaaa cgagccggat atttatcgtg caatccgccg tgatgcgtta
     4741 ttagaaaacg tggttgtgcg tgaagatggc actattgatt ttgatgataa atcaaaaaca
     4801 gaaaataccc gtgtgagcta tccgatttat catattgata atattgccgt gccgtcaaaa
     4861 gcaggacacg ctaaaaaagt gattttctta acggcagatg cattcggcgt attgccaccg
     4921 gtgtctaaat taacgcctga acaaactaaa tactacttct tatcaggctt taccgcaaaa
     4981 ttagcaggta cagagcgtgg tattactgag ccaaccccaa ctttctctgc ttgtttcggt
     5041 gcggcgttct tatcactcca cccgacacaa tatgctgaag tgttagtgaa acgtatggaa
     5101 gcagccggtg cggaagccta tttagtgaat accggttgga acggcacagg taaacgtatt
     5161 tcgattaaag atacacgggg tattattgat gccatcttag acggctcaat tgagaaagcg
     5221 gaaatgagta cattaccaat cttcaattta gcaattccaa ctgcgttacc gggtgtagaa
     5281 acccacattt tagaccctcg taacacttat gaagacaaag cacaatggca agctaaagca
     5341 gaagatttag ctggcagatt tgtgaaaaac tttgaaaaat atgcgaccaa cgaggaaggc
     5401 aaagcattaa ttgctgctgg tccgaagtta taagttgtaa ttataagtta taatcgctaa
     5461 aaaattagtt taggactaaa ccttgaatga ggtttagtcc ttttgtataa aggagaagta
     5521 caataatgac aacattccaa ttaaggctga aagccaaaga tgagcttacc ccacacccaa
     5581 cagcacaata ttggcgaaaa tgccaagtgg aaggactatt tgatctgccg tttatggatt
     5641 tagtgtttag agcggcacaa gttcaccgtg aaaattttga tgctaatgcg atccagcttt
     5701 caacgttact ctcaattaaa acaggaggct gtccggaaga ttgcgaatat tgcccccaat
     5761 ctgcccgcta tgatacggga atagaaaagc aaacaatgct tgatgtagag acgattgtag
     5821 aaaaagctaa aattgccaaa gagcgtggag caagccgctt ttgtatgggg gctgcgtggc
     5881 gaggacctag gcctaaagat attaaagtag tctcagaaat catcaatgcg gtgaaatcat
     5941 tggggctaga aacctgtggt actttcggta tgcttgaaga gggaatggca gaagaattaa
     6001 agcaagcagg gctggattac tacaaccata atttagatac cgaccctgaa cgctataaca
     6061 aaattatcca tacccgaaat cacgaagatc gaatggacac tttaggtaaa gttcgcaatg
     6121 ccggcttgaa agtttgctgt ggcggtattg tgggaatgaa cgaaacccgc cccgagcgag
     6181 caggcctaat tgcaagcctc gctaacctcg atcctcaacc tgaaagcgta ccgattaatc
     6241 agttgattaa agtagaaggt acaccgctta ccaatgccga agatttagac tggacagaat
     6301 ttgttcgtac cattgcggta gcaagaatta ctatgcctca aagctttgtc cgactttctg
     6361 ctggcagaac tactatgccg gaggcaatgc aagccctctg ttttatggca ggagcaaatt
     6421 ctattttcta tggcgataaa ttacttacta cagaaaatcc ggaagaagat catgatcgcc
     6481 aattaatgga taaattagat ttatatccgc tacaatatat agcctgagtg ccaatgattt
     6541 tcgcctgaat gaaaattaaa gaatcaatcg ttattttacg caaatttcta acataaaata
     6601 accgcttgca aaattcgttc ttgtcttatt tttaaattta tctataatgt gaggccttac
     6661 gcaagcttgc gtaattcgat ggggcgttat tggttcctcg caatggtgtt cagcttactt
     6721 gatcaggttc ggaagaaagc agtctgggtt gaaatttccg tgtgccgagg gaggctggta
     6781 atgccccacc cttttttcag ttctatcagg agaacgttat gctccagatc acccccattc
     6841 cggcattaaa agataattac atttgggcaa tccgtaacgg gcaagatgtg attattattg
     6901 atccatcaga acatcagcca gcattaaact ttattgcaaa aaatgcgtta aatttaaccg
     6961 ctatcttgat tacccataat caccacgacc atactgatgg ggtgagtggt attgttgagc
     7021 aatatccgaa tatccctgtt tatggtccgc aagaagtggc tgaatttgcc aatgtgattg
     7081 tctcgcctga acaacatatc agcctgtttg gttatgatgt aaggattatt gaaagtggtg
     7141 ggcataccgc agggcatatc agttatttat ttggctatga ttatctgttt tgtggcgatg
     7201 cgttattctc cggcggttgc gggcgggttt tcaccggtga ttaccaagcc caatttgatg
     7261 cgttacaacg ctttaaaaat ctgcctaact cggttaaagc ctacccggct cacgaataca
     7321 ccaagagcaa tttgaaattt gcagaagcgg ttctaccacc aagctgtgta ttatcggaat
     7381 atcaagaaca ggttgatctt ttacgttcgc aaaacaaacc gactttgcca accactattg
     7441 gcttggaaat gcaggtgaac ccgtttatgc aagcggtcga tttagccgaa tttattgcac
     7501 ttcgtcagca aaaagacaat ttttaacctc atatttctaa ttaagcatta aagcctctca
     7561 ctttaatgct ttttggttaa ataaaacctt tgcaaacatc gcttgtcaat tccactctgg
     7621 cttatcctat ggtatagtta cgactatttt tagcttaatt tattatttta gtgagtaaaa
     7681 ttctgtgaac ttcgatcctc aaaatatgcc taagcacgtt gccattatta tggatggcaa
     7741 tggcagatgg gctaagcaga aaggaaaatt acgcattttt ggtcatcaga atggtgtaaa
     7801 ggcagttcgt tctgcagtta gttttgcagc aaagcatcat atccaagttt taaccctcta
     7861 cgcatttagc agtgagaatt ggagcagacc agaaactgaa gtttcagctt taatgtctct
     7921 gtttatgaaa gctttagatt ctgaagttaa acaattacat aaaaataata ttcgcttaaa
     7981 gattataggc gataaatccg cctttagcga aaatttacaa aaacgcattg ccgaatcgga
     8041 aaaattaacc gaaaacaata ctgggctaat cttaaacatt gctgccaact atggtggtta
     8101 ctgggatatt gttcaagctg ctcaacaact agcagtgcac gttaaatctg aacaacttgc
     8161 tgtggagcag attacaccag cattgtttca acaacattta gtgacagaaa accagccgca
     8221 agtggattta ttaattcgaa ccagtggtga gcagcggatc agcaattttc tattatggca
     8281 aattgcttat gccgagctgt tttttagccc ggttttatgg cctgatttta atgatgaggc
     8341 ttttagtgat gcaatttatg cttatcagca acgtgaacgc cgattcggtg gttgttaata
     8401 taaaaagaat aaggaaatac aatgcttaaa gaacgtgtac tttcagcgat tattatgatt
     8461 attgccgtgc tggctgccat attttggctc tcaccacttc ctttaacttt agtgttatcg
     8521 gcaattgttg tggctgcaat gtgggaatgg gctcaatttg ccggctttaa acaccctgtg
     8581 ccacgtgcaa ttgtggcaat ggtgacaatc tgcttattac tttttgcgat cgttgcgaat
     8641 actgattata tccgagccac ccgttttatt actgatgaga ctacccctat cctctttatt
     8701 ggctgtattt ggtggttaat tgcccttgtc ctagtggcaa cttaccccaa ctcggcaaaa
     8761 ctgtgggaaa aatctgttgc agctaaattc ctatttggac ttgctacctt agtgccgttt
     8821 ttaattggca cgctcgcatt gcgtttccat aattatgcat ttgatccata ccaaggaact
     8881 tatttattcc tttacgtctg tttattagtt tggggagctg attcaggtgc ttattttgct
     8941 ggcagagcct ttggcaaaag aaaacttgcc ccaaaagtat ctccgggtaa atcgtgggaa
     9001 ggcgtaattg gtggcgtact cacctctagt ttgattgcct ttaccttttt acaacttaca
     9061 ccggcaaatg tattcggcaa agcattagcc actaccccat ttattttagt ttcggtcggt
     9121 atggttgcta tttcagtctt aggcgatttg gcagaaagta tgtttaaacg ccaagcaggc
     9181 attaaagaca gtagccagtt aattcctggg catggaggta ttttagatcg tattgatagt
     9241 ttaaccgctg ccgttccgtt ttttgctaca ttcttctttt ttgtactata gaatatgacg
     9301 tccatcattg cattttttat tttaatttgc gtactggttt ttgtgcatga atacgggcac
     9361 ttttgggctg ctcgcaaatg cggggtaaag gtgatccgtt tttcgatcgg atttggtaaa
     9421 gtcttattta agaaaaaaga taaacaagga accgaatttg ttttttcact tattcctctg
     9481 ggcggctatg tacaaatgtg gaatgatgaa acggatatca acgctccagc tcaacaagct
     9541 cttaacacaa aatctgtatt gcaacgtgca tttattatta tagccggtcc tgctgcaaat
     9601 tttatttttg cgattttggc atactgggtc gtttttattg ccggtattcc aactgttaaa
     9661 cctgttattg gggaaatttt accaaacact atcgcctccc aagcaagaat tcctaccgaa
     9721 ttggaaatta caaaaatcgg tcatcaatct atccaagatt gggaaagtgc atctttagca
     9781 ctagttggtt ttgtgggcaa taaaaatgta ccgttagagg gaaatatcaa cggcaactca
     9841 acacaaaaat atgaactcga tttatctaac tggagtattg actcagccaa agaaaaccca
     9901 ttaaccgcat taggtattcg ccccaaaagt gcaaaagtca ccgctgaaat taaacaagtt
     9961 gtcgaaaatt ctcctgcaag ccaagtgggt attcaagcag gtgatcgtat tcttcaaatt
    10021 aaccagcagc catttaattg gttcaattta gttgaactgg tacaagcagg taaacctatt
    10081 gaacttaaaa ttgaacaacg aggtcagatt aaagaccttg tcgtccaacc agaaaaaaaa
    10141 gacgaacgct atattatcgg ggtaatacca agttatgagc ctcttgcaga taaatatcgt
    10201 accgaattaa aatatgatat tcttaccgca ttttataaaa gtatcgaaaa agtgtggtct
    10261 cttacccaaa ccatactcca atttatcggt aatttaataa gcggtgattt gtccattaaa
    10321 aatttaggtg ggccaatttc aatggcaaaa ggagccggtg caacagctga aatcggctta
    10381 gtttattacc ttagttttat ggctctaatc agtgtcaatt tgggggtaat gaacttattt
    10441 ccacttttac ccttagatgg tgggcaactt gttttattgg ctgttgaagc aattcgtgga
    10501 aaagcattat cagaaaaaat acaactcaaa ttccaacaaa ttggatttgc attcgtgctg
    10561 agtttaatgt tattcgcctt tgccaacgat ataattcact tttaacaagc ggttaaaaaa
    10621 ggtgactttt ttgcaaaaag caccctgaca tcaaaatcca taatatggat ttaaactata
    10681 ttcttaataa ttttgcaaaa cgatcatagg ataatttcaa tgaaaaaatt attactttcc
    10741 tctcttttaa ttgcaaacgg tgtagttgct gcacctttcg tagtaaaaga cattcgtgtt
    10801 gaaggtgtgc aacctacaac aggcgaatct atcatttcat ctattccggt tagagtaggt
    10861 caaacagcaa cggatactga cgtatctaat gtcgtccgcc atctattcag ccaacaacgt
    10921 tttgcagatg ttcgtgcaac acgagaaggc aatacgcttg tcatcaaagt cgctgaaaaa
    10981 ccgattattg gcaaggtaga gatcgaaggt aaccaagcga ttcctaaaga tgccttagag
    11041 caaaatttaa aggcaaactt aattaaccaa ggtgaaattt ttgatgctgc caagcttgaa
    11101 gcttttaaag aaggactaat cgaacattat cactctaccg gccgttatga agccaaaatt
    11161 gacacatctg tttcgaataa caccgaaggt ggcgttaata ttaagttagc gattaatgaa
    11221 ggtgaagttg ctaaagccaa aacaattaag tttgaaggta ataatgcctt ctctgataaa
    11281 aaattattag aaaacttaga tattcaacct gatgtttctt ggtggaatat ttttgaaagt
    11341 agcaaattcg aacaaaccgc ctatcaaaaa gacttagaaa cattaagaga tttttattta
    11401 aatcgtggct atgcaaaatt tgctatccaa gataccgatg ttcaattcaa tgataataaa
    11461 acggaagttg cattgaccta taaattagat gaagggtcac agtaccatgt cagtgaaatg
    11521 cgcattatcg gtaatacagc caatatggat agccagctca acgccctact aaaagaattc
    11581 aagcctggtc aattattccg taaatcagac cttacacaaa ttgaagaaga gattaaatct
    11641 attttagggg acgcaggtta tggttcagct aaagtagata tttatcctca atttaatgaa
    11701 gaaaataaaa ccgtaaaaat cagttttgtt gtggatgccg gtcgtcgtat ttatgttcgt
    11761 aaaatccgtt ttgaaggtaa tggtgtcact gcagattcaa cattacgtcg tgaaatgcgc
    11821 caacaagaag gtgcttggct ttccacaaac aaagcttctc taggtaaagc tcgtttagaa
    11881 agaaccggtt tctatgaaag tgttgatatg tcaatgccaa atgtagaagg tacagccgat
    11941 caagttgatg tagtgtataa aattaaagaa cgcaataccg gtagtattaa ctttggtatc
    12001 gggtacggca cggaaaacgg tatcagctat caagcaggaa ttaaacaaga taatttctta
    12061 ggtatggggt caactatcag tctaaatggt acccgtaata actacggtac cagcgttaac
    12121 ctaggctata ccgaacctta ctttactaaa gatggtgtaa gtttaggcgg taatattttc
    12181 tatgaagatt atgataactc agacaatgat tcaatggctt catataaacg ccaaacctat
    12241 ggtattaacg gcacattagg cttcccggta aatgaaaata actcatacta cttaggttta
    12301 ggctatacgc acgataaaat taaaaatgca gcacgtgagt acactcgtga gaaatatgta
    12361 aaatcaatga actttgagtt cgatccagct gccgattatt acaaaaaaat caaagctgat
    12421 gattttgatt tttctctcgg ttggaactac aacagcttga atagaggcta tttcccgact
    12481 gaaggaacta ccgcaaacat tggcggtaaa atcacaattc caggctctga taataaatat
    12541 taccgagtca gtgcagactt tagaaattat tacccgttaa accgtgagca caaatgggta
    12601 atttcaacga aagctagcat tgcttatact aatggatttg gtggtaaaga agttccgttc
    12661 tatcagcttt atactgccgg aggtattggt acactaagag gtttctctta cggtgcagta
    12721 gggcctcaag cgatttacta taatacaaaa tccggcaaat ttgatagcat gaataatgat
    12781 attatcggtg gtaatgcgtt agctgcggca agcttggaat taatcacacc aacgccattt
    12841 gtgagcgaaa aatatcagca caatgtaaga acctctctct ttgttgatgc tgcaagtgca
    12901 tggaatacaa aatggaagaa agatgaatat acgaacttgc ctgactatgg tgatttcaaa
    12961 cgtttccgtg cttccgccgg tattgcattc caatggatgt ctccaatcgg gccattatca
    13021 ttctcttatg cgaaaccaat tcgtaaatat gataatgatg atattgaaca attccagttc
    13081 aacattggta gttcattcta attaaccaca agcggttaat aaatgtaaaa aatttgcaac
    13141 ttagccgctt atttcaaaac tgttcataca aggaaaacaa atgaaaaaat tatttaaaat
    13201 gactggctta gccgtagctt tagcctctac aaccggaatc gcgaatgctg cagatactat
    13261 tggtttcgta gatccaagct atgtattaca aaaccaccct gtattattag atgcttcggc
    13321 aaaatttgat aaattcatga aagaaagcca agaaaaattt gctgctgatg aaaaaaaatt
    13381 agcagatgaa aataaaacct taacggctga gcgcaataaa attaatgaag atgcgcaaaa
    13441 attacaaaat gaacaaaaaa atgtagaagc ttctatcaag aaaaaagtgg cagcattaga
    13501 gaaagatgcg cctcgcttac gttcaaaaga gattcaagca cgtcaaaatg cgattcaaaa
    13561 agaagcaaac gcattccaag ctaaagtaac agcaattcaa aaacgtgaag ctgattttgc
    13621 aaaaaaagca gaagccttcc agaaacgtgc agatgaattc caaaaacgta ttgaacaagc
    13681 gaataaagaa aatggtggca ttaacccaca agaagcgcaa aaacaagcgg ttgatgaagt
    13741 aaatgcaacc attaaagaga tcgcaaaatc gaaaggttac actttagtat tacaaccaca
    13801 agtagcactt tatgctgaag atgaaggtaa agatattact gaagcagtac ttgatgctat
    13861 tgttaaaaaa catccggaaa ttaaaataga aaaacctgca actgaagctc aaccagctac
    13921 agaaaaagaa accaaagctg aagaaactaa accagaagaa gcgaaaaaat aatggcaaat
    13981 ttccgtttaa ttgatttagc ggagcatatc ggcggtactc ttaggggtaa cgccgatttg
    14041 gctattcaaa gtattgctgc tttagataaa gccgacagct cgcaaattac ctttatctca
    14101 aatgcaaaat atcgggaaaa tttgaccgct tgcaatgctg gagctattat cgtcagcccg
    14161 gcagatgtag aattttgccg agcagatcaa aatcttatca tcgttgccaa tccgtatgtt
    14221 gcttatgctc aactggctca atatatggat tctactccga aagcagcgag cgaaatccac
    14281 ccaagtgcgg tgatttcacc tgaagctaaa ctgggtaata acgtatcggt aggggcaaat
    14341 gccgtgattg aaagtggcgt agaattgggc gatgatgccg tgatcggtgc aggctgtttt
    14401 gtgggaaaaa acagtaaaat cggggcaaga acccaacttt gggcaaatgt ttcggtgtac
    14461 cacaatgtac aaatcggagc tgattgcttg attcaatcct caacggttat cgggagtgat
    14521 gggtttggct atgcgaatga caaagggcaa tggattaaaa tcccacaaac cggtggtgtg
    14581 attatcggta atcgtgttga aattggtgct tgcacttgta ttgaccgagg tgcattagat
    14641 ccaaccgtaa tcgaagataa tgtgattatt gataaccttt gccaaatcgc ccataatgta
    14701 cacattggtt ttggcactgc cgttgccggc ggcgtcatta tggcaggcag tctaaaagtt
    14761 ggtcgctttt gccaaattgg tggagcaagt gttatcaacg gtcatatgga aatctgtgat
    14821 ggtgccataa ttaccggaat gggtatggtt atgcgcccaa ttacagaaaa aggaatttac
    14881 tcatcaggta ttccattaca aaccaataaa gaatggcgaa aaaccgcagc acttgtaatg
    14941 aatattgatg aaatgaacaa acgcttaaaa tcgttagaaa aacgttttaa cgattaattt
    15001 tattagaggt cttaaagtga cagaaatgac aactgaaaat cgtgagccaa atattattga
    15061 agtaaccgaa attatggata tgttaccgca tcgctaccct ttcctgttag ttgatcgcgt
    15121 aaccgattat gaagaaggga aatggttaaa agccattaaa aatgtaacct tcaatgaacc
    15181 ttgttttacc gggcattttc ctggcgcacc aatcttccca ggagtattga ttctggaagc
    15241 aatggctcaa gcaactggcg tattagccgt tgccacttat ggtaagttaa gtgaagacga
    15301 actctactat tttgccgcaa ttgacaatgc tcgctttaag cgaccggttg tgccgggcga
    15361 tcaacttcaa cttgaggttg aatttcttaa agaagtacgt ggtattacta aatttaccgg
    15421 taaagcatac gttgatggca aattagtctg tgaagcagat ttaatgtgcg ctcgccgtaa
    15481 ataattcgat ataagcccaa actagaggga acaaactatg cgtctaattg attcaacagc
    15541 aaaaattagc ccgcttgcca tcattgaaga aggtgctgaa attggcgctc acgttgaaat
    15601 tggtccattt tcagtcatcg gtaaagatgt caaaatcggg gctagaacga aaattcactc
    15661 aaatgttgtc attaacggca tgactgaaat tggtgaagat aaccatattt tccaatttgc
    15721 cagcattggt gaaatcaacc aagatctaaa ataccaaggt gaaccaacca aagtggtgat
    15781 cggtaatcgt aaccgtattc gtgaaagtgt tactattcac cgaggtacgg tacaaggcgg
    15841 tggcgtgacg aaaatcggtg atgataactt atttatgatc aacacccaca tcgcacacga
    15901 ctgctctatc ggtaaccgtt gtattatcgc caataatggt acgctagcag gtcacgttac
    15961 cctagatgat ttcgtgattg tgggaggaat gtccgccatt caccaattcg ttgtgattgg
    16021 ttcacacgtt atgcttggag gcggttcaat ggtcagccaa gacgtaccgc cttatgtcat
    16081 ggcacaaggt aaccacgcac gcccatttgg tattaacttt gaagggttaa aacgtcgtgg
    16141 ctttgataaa ccaactatgc acgctattcg caaagtctat aaactgattt actccagcgg
    16201 aaaaacattg gaagagtgcc tagtagaaat tgagcaaatt gcagcaacag aacctgcgat
    16261 tgctattttt aaacaattct tcaaacgttc tacccgtggt attattcgtt aataaacgaa
    16321 accccgaaat caattcgggg tttgttttat caagcgaccg tcgaaccttt caacaatttt
    16381 cgaatccaag ctcgatttgg gctaaggtta tgccaaatat cctcactgat tggcacaggc
    16441 tcattcacaa tcaggcttgc taacaattcc cctagaagtg gtgcagtcgt caaacctcga
    16501 gaagacaggc cgtttaccat atacagattg gtaaaaattt cagcattttc taccgcttgt
    16561 ttccgtctca actggttgta taaattggca tattggcttt tttgctgctc aaaatgatgc
    16621 actgccccaa ccatcggtac acgatcacga aacgccgcac gaataccgac tttggcttta
    16681 ttttcagata aatcaattcc ttgcgtccac tcacaaacgg ttacattttg ctgaagtttt
    16741 gcaacattct cccaatgctc cgataaacta aactcggttt ctgcattatc ccgaatatgg
    16801 cttgctccaa tgcaatgcgt gccataggct gacattggcg ttaaataacc atcataacaa
    16861 agcacacact tcagtttttg taattcgctt gtagtcggaa tttggctcac ttgccctcgt
    16921 accggataca acggaatgcc gttcgcttgg ctaaattcat tcaacgtatg tccatttgcc
    16981 agcacaaccg cttgatgtcg aaccgtttct cccctcgtct gccattgcca cattccatta
    17041 gaaaaggtta aatgctcaac tttgtgattc agtacaatct tcaacccttt ctgctccagc
    17101 caagtaaagc catttctaac aagttgtacc ggtgaaagcc aaccagcttg cggaataaat
    17161 gccccgctgt ttggcacgct taaacctaat ttttcactta attctgcctg tgaacaagat
    17221 tttaataagg tgtcatcagc cgtctgctcc accatttttt ccagtttttt agccgttttc
    17281 tcgtcatagg cgtaaagcac taccccgctt aaattatgct caaactcaat gttggatttc
    17341 agttgttgca agcgttgcaa tgcataatca aaactatgga tataaaactg tacatttcgc
    17401 tcgtcatcat cgcttaactg tgggtaaatc gccccttgta aatttcctga agcatttatt
    17461 gccaaggttt catctttgca atacagcgtg acttgcttgc ctttttctaa cagcgataac
    17521 gcaacgaaga aactcgctac tccgccacca ataattgcaa tgtcatcagc ggtttcattt
    17581 ttggcataaa aataggggta attaggctcg gaaacttggc tatctaacgg tttctcgccc
    17641 caaagcattt ctcgtttttt gccaaatcct ttgcgttttt tcactgcaaa acctgcggct
    17701 tccagccctc gtctgaccat acttgaagcg gtaaaagtag caaaactgcc gccattggca
    17761 cttagtcgaa acatttgcag atataactgt tcgttccaca tttctgggtt tttatcaggc
    17821 gaaaagccat ctaaaaacca agcgtcaatc gtgccgctat aaagatcgcc taattggggt
    17881 aagttttcag caatctcacc gaaccataaa tctaaataaa cctgctcaaa atgataacgt
    17941 tggcaaccta tttggcgagg ctgccaacaa gcggttaaat tttcagataa tgttgcaaat
    18001 tgcggatagc gttggtgaat atcagctaat tggctggccg tcagaggaaa tttctcaaat
    18061 gagataaaat agagtcgttt tagtttactt tgcggaaatg ctgcccgaaa ctgttggaat
    18121 ttgtcagcaa cggctaaaaa attcaagccc gtgccaaagc cggtttccgc aataacaaaa
    18181 gcctctttcg ggtgagattg ccacttttcc cacagttggt taccttcttg aaacacatag
    18241 taactttccg ccaaaccatc ttgggtagaa aaataaatat catcaaattg ctccgacacc
    18301 ggtgtatctg catcattaaa tgtaagtgtc gcaaaagtca gtttacccat catatcccct
    18361 taaaaacaaa acacggaaaa ccccaagatt ttccgtgttt caaccagttc aatagtacca
    18421 atgttagaaa atgttgctgg caaaaataac gatcatacca agtgcgccta caaccgttag
    18481 cattgaataa ccaaaagtac ccattttaca atcctcattg ttaattatga ttaaaacggc
    18541 tttattctag cataatttcc atcgctttga atgcctatgc ttgaataatt ttgccaaaac
    18601 aagcggtcaa tttttgtaaa tcttttacgc ctttggcact ttccacgcca gaatttaaat
    18661 ctaacccgac acagccttga gcaagggctt gctcaatatt ctcagtgcca ataccacctg
    18721 ccaataacgc tttttgtttt aaggtttctg gaatcaacgc ccaattaaag gttttgcctg
    18781 tgccgccttg ctgattgcct actttgctgt ctaatacata acgagcaatc tgtggattat
    18841 cgttaaattc tagattttca acctcaacat caaccgataa ggctttccag atttgagttt
    18901 tactacctaa tttctctgcc agttctgcaa tgtattgctc atcttccgag ccgtgcaatt
    18961 gaactgcaaa taactcaagc tgttttgcca ttttttccac aaattcgacc gcttgatttt
    19021 ggaacacccc cacataacgc aacggtgcat tcaccaccaa ttcttgggct tggcgaagtg
    19081 aaagctggcg aggcgagcct tcggcaaaaa ttaaaccgcc atataatgcc ccttgctcat
    19141 aaaccgcttt cacatcttgc acacgggtta agccacacac tttgttttca ccaaaaatca
    19201 ccgcccgcac cgcattattg agatcggcac ttcccattaa actgctgccg attaaaaaag
    19261 catgaacata cggcttaatg tttttcactt gctggtgatc gttaataccc gattctgaaa
    19321 tcaaacagac atcagccgaa atttgggctt ggtatttttc caccaaacgc acaatgcggt
    19381 tcatatcaat cgtgagcgtg tgcaaatcac ggttattaac gccaattacc ttcgccccta
    19441 aggctaaggc acgttcaaat tccgcctccg tgctggtttc agtcaaaacg cccattccta
    19501 actcgtgagc cagtgtggca agttcacggt aggtttcatc atttaccacc gataacatca
    19561 ataaaatcgc atcagcatta taaaaacggg caaggtaaac ctggtatgcc gaaatcataa
    19621 aatctttaca caaaatcggc tgtgtggttt ggcgtttgac ttgatcgata taacggaaat
    19681 cgccttgaaa atattgctca tcggttaaaa ccgaaatcgc cgcagcgtaa tttttataca
    19741 cttgggcaat actgtctaaa tcgaactcag cacgaattaa cccttttgac ggtgaagctt
    19801 ttttacattc taaaatataa gctggttctt ggtgtgtgcc tttggcaaga gccgcataga
    19861 aatcatggtc gctttttaca attttgtgct gaaattcact taacggaaag gcttgctctt
    19921 tttgtgccac ccaaatggct ttatcttgta cgatcttttg taaaatcgtc ggttggtttg
    19981 gttgagcgtt atcttgaacg atgttttgca tataaattcc tagagcgaaa tcggtttgaa
    20041 tggtaaaatc tgcccttatt tttacccgaa aaagtctcat ttcacaagca aaactaagat
    20101 gaaatcacaa gttatacagc atttatctta tttagaaatc gccctgagag ttaatcaact
    20161 ttgggaggcg acaccaccaa gccctgaagc cttagccaat gagcaacctt tctgcgtgga
    20221 aaccttaacc ccaacccaat ggctacaatg gatttttatt cccagaatgc gggccatttt
    20281 agatgcaaat gccgatttac ctcgcaattt tgcaatcacc ccttatttag aagaggcatt
    20341 gaaaaacgaa ggttatttac aagcgatttg tgaaccgcta ttaggtttgg aaaagttgtt
    20401 gaaagattaa cttctctctc agttctttta ttaatctgac aaattcgttg atagtgccag
    20461 cgtccacgct ggtactaatt ttaacggtta attaatcaaa atttggcaca agcgaggacg
    20521 cttgcgccat catagagatt tgataaatta tacttaatgt attatgacct tagatatttt
    20581 ataccaagac aactcgctta tcgccatcaa caaacctgcc ggagtgttgg tgcatcgttc
    20641 ttggttagat aaacacgaaa cggtgtttgc aatgcaaacc ctgagggatc aaatcgggca
    20701 acacgttttt ccgattcacc gccttgaccg cccaacctca ggtgtattgc tgtttgctct
    20761 caacagcgaa accgcccgaa taatgagcga gcagtttgaa caacacctag tacaaaaaac
    20821 ttatttggcg gtggtgcgtg gctatttaca aggttcggca caaattgatt atccgctcaa
    20881 agtgatttta gataaaattg cggataaatt ttctcaggaa aaagaggctc aagcggcgat
    20941 tactgattat aaaggcttag caacggttga aatgccttac cctgtcggca agcaccaaac
    21001 ctctcgttat agtttggttg aacttagccc taaaaccggg cggaaacatc agcttcgccg
    21061 ccacctgaaa cacctgttcc acccgattat gggagacagc aaatatggcg acttacacca
    21121 aaaccgtgct ttagttgaaa aatcaggcgt aagtcgttta atgttacacg cccataaatt
    21181 gcaatttcag cacccgaaaa atttgcaaaa aatagagata attgcatcgc ttgatgagca
    21241 atggcaacgc ctctttgcat tttttgactg gaactttact caatattatt agacaaaaaa
    21301 gaggattgaa tggataattc acttttatca ttgacacacg agcaacaaca agccgcagta
    21361 gaagaaattc aaaaactgat ggcacaaggc atcagtgccg gagaggcaat tcaaattatt
    21421 gctaatcaat tacgtgacaa atatcaaata ttggagaaat caaacaatga ataaattatg
    21481 gacagtgctt gccctaacaa taacttccca ctatagcttt gctgccgctg aaaaaatagt
    21541 cactaaagat ttaccggcag aaggaaaacc tgcagtcgtg ctacaggttt ttgatgaaag
    21601 tgaaaaaatt gcaaaaccta ttaagggaaa taagctcttt attagcaaaa aacaaacaag
    21661 gctttgctgg cacagtatta atcttcctgt acaaaataaa gttactattg cagaagcttt
    21721 ctatgcccct gctgcaatga aattagcttc tcccggctct aaaattaatt cttctgcaga
    21781 caagaaaaat catactatca ttactgaaat aaaccttgca aataatcaag tattaaatcg
    21841 ttgctggggt tttgataaaa ctgaccctgt cggtaaatac aaaatggaaa ttcaaattaa
    21901 cgatcacatt ttcaaaggtt tagaatttga aattgtaaaa taacctaaaa gccacagagt
    21961 aacaccctgt ggctttttgc taaatcattg tttttaaatt ggttaaattg tgcagcaaat
    22021 aatctttact cttcacaaag gctctcgcct gttgccagtt gctaaattgt tgctgagtgc
    22081 attgattaaa acgtaccagc acttccaaac tttcattgcc gacacaaata aaatcagcta
    22141 ataattgggt taatttttca ctgttttcac catccattgc agttgcaatt ttctgctccc
    22201 atttaaccgc ttgtccgagc aaataacccc gctgggcttt gcttaaatta ctcaaccaca
    22261 tcccatccgc ttttggcatt gcctcaacca aagtaaataa gtcgcctaga tttccttgct
    22321 tgatttcaaa ctccaattca caaatcggct cttcaccaaa atgattttta atgatgccct
    22381 gatctaacgc tacctcaatg tcagacatcc ccacttgcac caaccaagtt ttacgagtga
    22441 aatcggtgct gaatatcgct tgcaagcttt ctgcaatctg ctctgaattt tcaaacggca
    22501 actggtattt ttccactaat gtttgaaaat ccggctggct attgggtaaa gctaaattat
    22561 attccggacg aatatgcaaa ccgcctacaa tttccccttg tgtttttaac gtgatttcat
    22621 attgttgatt cacagaacgc acccgcagcc ccattttttg cgtggcaaaa aattgctcgg
    22681 gcgtatcata ataggtgttg cctaacaatt ccgtttgatg agcaagcaca gggaatggcg
    22741 aggtttgatt caagtagttt tccactaacg ccacattctg ctgttccaac attattttca
    22801 gttcgatttc tgcttgtttt tggttttcca tttcacacgc ccctgcaacg ttgtataatc
    22861 aagcggttat tttatcaata aattttgcaa aatgttttca aaaattcacc ataaactgaa
    22921 taactttgtc cagcgtggac tcgacaacca tttacgcctc gccgttaccg gcttaagccg
    22981 tagtggcaaa acggcattta ttaccagctt ggttgatcag cttttgcata tcaacaaagg
    23041 cggtaattcg catttaaacc tgtttgcgcc tgcacgccac gggcaaattc tatcggtaaa
    23101 acgcgttgag caaggggatt taactattcc ccgctttgaa tatgataaaa accgccaaag
    23161 ccttgaaaat caaccacctc aatggcctga atccaccact ggcattagcg aaattcgcct
    23221 tgcgattcgc taccagcggc aacattctct gctacgtcat attaaagaaa ccggcacgct
    23281 ttatttggat attttcgatt acccgggcga atggctgtta gatttacccc tgctctccct
    23341 ttcctataaa gaatggtcgc aaacgcaaca aaccatacat aaagatgagc gtgcagagct
    23401 tgccacacct tggttacaag cggttaaaaa actcgatctt tttgcaaaaa ccgatgaaaa
    23461 tttactggca gaattcagcc aacaatacac cgattatttg ctcgcctgca aagctcaagg
    23521 aatgcaatat attcagccgg ggcgatttgt gttgccaact gaaaatgcca aaggtgcacc
    23581 ggtattccaa ttttttccgt tattagattt aagcgaagct gagtgggaaa agttggaaca
    23641 aagcgacaga aacagtattt tccataccct caaaaaacgc tatgagcatt accagaaaaa
    23701 aatcgtcaaa ccgttttatg aagattactt ctctcaattt gaccgccaag tgattttggc
    23761 agactgcctc acaccgttaa attatggcta taacgaattt atggaaatga aattagggtt
    23821 acagcaactg tttaaacatt tccattatgg caatcgttcg ctatttcacc gtctgttttc
    23881 gtccaacatt gataaattgc tatttatcgc aacaaaggca gatcacatta ctagcgacca
    23941 agtgccgaat ttggaaagcc taatgcgaca attagtgcaa gaagggggaa gacacgcaga
    24001 atttgatggt atcgaaaccg gctatttagc catttcctcg attcaagcaa ccgatgcggt
    24061 gaaagtgact cagcaagata aaatcattaa agcgataaga gggatccgtt ccagcgatag
    24121 aaaacaagtg acactctacc ctggcagcgt gccaaatcgc atacccgata aaaattactg
    24181 gcaatttaac cgttttgaat tcgaccaatt cgagcccaag caacttgatt atagccaagc
    24241 gattccacac ttcagaatgg attcggtgct acaattttta ttggcggata tgtttgagta
    24301 aaatcttgtt gcatatttcc attaaaggta taaaatttta tacattatga atactgtaat
    24361 ttcccaacga aaaccaattc actgggttgg atcaacctta gatgatattc gtgaatttcc
    24421 ggataacatt aaaagagaac tcggttttga tcttgattta gttcagcaag gcttattacc
    24481 gagggatttt aaagcgatgg caaatttggg ttcaggcgta atggaaattc gagtaaaaga
    24541 tccctcaggg gcttttcgct tagtgtattt agctaaattt aaagatgcaa tttactgttt
    24601 acacgctttc caaaagaaaa cgcaaaaaac agcccctaaa gacattgctg tcattaaagc
    24661 acgctatgct gccgtaaagg agttagaaaa tgaataatat tgatactaaa attcgccata
    24721 ctacagaagc tcagggtaat gtttttgaag atcttggttt ccctattgat gaagctcaaa
    24781 aattgaaatc tgccagtcag caactgattg aaactaaact gatgctaatg aatgaaatga
    24841 gcaactggat tgataaaaat aatctcaaac aatcagaagc ggcttctatt ctaggtgtta
    24901 gccgccctcg aatttctgat atggtcaatg gcaagttaga aaagtttacc ctagatacct
    24961 tagtcacttt tgttgcaaaa accggcaaaa caatccaatt gcaattatcc tgatatttgc
    25021 aaaattttac tcaaattcaa ccgcttgttg cttttatcat tcactaacaa ggttatttca
    25081 agtaaaattg tgactaattt tttattaata aacacaaatt atggcaaaaa aacctaaagt
    25141 tgcatcaaat acgattgcgt taaataaacg tgccagacac gaatatttca ttgaagatga
    25201 aattgaagcc ggcttagagc tacagggctg ggaagtcaaa gcattgcgtg ccggaaaagg
    25261 caatatcagc gatagctatg tcatctttcg ccacggcgaa gccttcttat tcggggcaat
    25321 gattacgcct ttgaatatgg catcaaccca tattgtcagc gacccgaccc gcacccgcaa
    25381 acttctactg aataaacgtg agttagactc actgttcggt aaagttaatc gtgaaggtta
    25441 taccattgtt gccacctcaa tgtattggaa aaatgcgtgg gtgaaagtaa aaatcggctt
    25501 agccaaaggg aaaaaactgc acgataaacg tgaagatatt aaagaccgtg aatggcaagt
    25561 ggctaaacag cgtattatga aaaacgccaa tcgtggctaa atgaataatt accctctccc
    25621 cttgtgggag agggacagaa aaattgcgtt cagcaatttt tcagggaaag ggggatttgt
    25681 aaaagttcaa ggaaaaacaa cgcttgccct ctctctgaaa aatatttctg aacgaaatat
    25741 ttttcggtct ctctcccata aagggagaga gtgaaacaca aatttaaact aaggaacata
    25801 caatgatcga ccaaaaccta cttcgtacca atttagaaga cgttgctaca gctcttaaaa
    25861 tcaaacgtaa ttttatttta gatgtagagc gagtaaaaac ccttgaagaa cagcgtaaaa
    25921 cgctacaagt taaaaccgaa accttacaag cagaacgcaa cactcgctcc aaaaacatcg
    25981 gtgcggcaaa agctcgtggc gaagatattt cagctttatt agccgaagta gattcaatgg
    26041 gcaacgaatt agacacggca aaagtagaat tggataaagt acaggcagaa atccgtgagt
    26101 tgttgctttc tgtgccaaac ttaccggcag atgaagtacc actcggtaaa gacgatagcg
    26161 aaaacttaga agtattacgt tggggcgaac cacgtcaatt cgactttgaa gttcaagatc
    26221 acgttaccct tggcgaaaac ttaaacggtt tagattttgc tgccggtgta aaattaaccg
    26281 ccagccgttt tgtggtaatg aaaggtaaac ttgcccgctt acaccgtgca ttatctcaat
    26341 ttatgttgga tttacacact gaacaacacg gctatgtgga aaccaatgtg ccatttttag
    26401 tcaatcacga cactctatac ggcacaggtc agctaccaaa atttggcgaa gatttattcc
    26461 atactcaacc attaacaggg caagatccaa acgaggtgca acgcccattc ggtttgattc
    26521 caaccgctga agtgccagta acgaacttag tgcgagatga aatcattgat gaagacagct
    26581 taccactgcg ttataccgcc cacacccctt gtttccgtgc agaagccggt tcttatgggc
    26641 gtgatactcg tggtttaatt cgtatgcacc aatttgaaaa agtggaaatg gtgcaaattg
    26701 tcgcccctga aaaatcaatg gaagccttag aagaattaac cggtcacgca gaaaaagtct
    26761 tacagctttt aggcttgcca taccgcaaag tgctactctg cactggtgat atgggctttg
    26821 gtgcagcaaa aacctacgac ttagaagttt ggctaccggc acaaaacact taccgtgaga
    26881 tttcttcttg ctcaaatatg tgggatttcc aagcccgccg aatgtctgca cgttgtaaag
    26941 ctaaaggcga caagaaaact cgcttggttc acaccttaaa cggctcaggt ttagcggttg
    27001 gtcgcacact ggtcgctgtg ttagaaaact accaaaatgc cgatggctct attactgtgc
    27061 ctgaggtgtt aagaccttat atgggtggtt tggaagtaat taccgcttaa gattaataaa
    27121 tgaaaccaat ctcagaaatg gggttggttt ttttaataaa tcttatccct aatctttttc
    27181 aggataattc ataaaaattt cagtaactac tcggcggttt tgcactgtat ctaaacgaat
    27241 aggatttttc attctcccta aacgaaatgc aataatggtg acttttttcg gttcatctat
    27301 tttatctaat tgatagaata ccattatttc ccgttgataa accgctcgct ttctgaaacg
    27361 taaatccttg cgaaatgcga cacctgcttt tggataaaac tgtaaaccat tgatgatatt
    27421 cgtttgagta tgctccgaaa ataatccata gaaaataaac tctaatagat tatttttaaa
    27481 atcaacacta accatctaac tgctcccaag cagttaaatc tcctcgtgat aaacgttcag
    27541 caatatcagc ataaaattgt ttcggtactt ccctttttac ttggtattga gctgattgtt
    27601 cttctaataa atgttcttct atcatcttga tttcttctgt tgtccactct tcatcttctt
    27661 tatgtacaac aaaatcggta tctacaatca caatagacat acctagctcc ttcaagtact
    27721 ggttatatat tctgtatttt gcctgttcta aattcagctg tctagctttt ctgttactca
    27781 caatttgcaa atttttcatc aaattccacc gcttgccatt caaaaaaagg cgtttttgcg
    27841 gtatcctatc ggcaattttt tcagttaaat ttaaaggtta aattttatgc aacagcagta
    27901 taacccaagt gagattgaac ctaaggttca gcgttattgg gcagaaaata aagtttttaa
    27961 agcagttaaa gacgttacca aagagaaata ctattgcctt tcaatgttgc cttatccgtc
    28021 aggtaagcta catatggggc acgttcgtaa ctacaccatt ggtgatgtag tgtctcgtta
    28081 tcagcgtatg atcggtaaaa atgtattaca gccgatgggt tgggacgctt tcggtttacc
    28141 ggcggaaggt gctgcggtga aaaataatac cgcaccggca aaatggactt acgaaaacat
    28201 cgaatatatg aaaggtcagc ttaaaatgtt gggcttctct tatgactggg atcgtgaagt
    28261 caccacttgc cgtccggaat actacaaatg ggagcaatgg ttcttcacag aactttataa
    28321 aaaaggctta gtgtataaaa aaacctcaac cgtaaactgg tgtccgaatg atgaaactgt
    28381 gcttgccaac gagcaagttc acgaaggttg ttgctggcgt tgtgacaccc cagtggaaca
    28441 gcgtgaaatt ccacaatggt ttatcaaaat cactgactat gctgaagaat tactcaatca
    28501 gttagataat ctcccacagt ggccggatca agtaaaaacc atgcaacgca actggatcgg
    28561 tcgttccgaa ggggtagaaa tcacctttaa aattgccggt tcaaacgtag aattaccggt
    28621 ttacactacc cgtccggata ccttcttcgg cgtaagctat gtggcgattg ctgcggctca
    28681 cccattagca gaattagctg cacaaaataa cccggcattg gctgaattta tccgtgaagc
    28741 gaaaaacacc aaagtggcag aagcagaatt agccaccatg gagaaaaaag gaatggcaac
    28801 cggcttgttc gccattcacc cgttaacagg aaaagaagta ccggtttggg ttgctaactt
    28861 tgtgttaatg cactacggta caggtgcggt aatggcggtt ccggctcacg atgagcgtga
    28921 ctttgaattt gcacaaaaat acgatttgca aattaatcag gtaattcaac cgcttgatgg
    28981 ctcagagtgg gatttcagca aagccgctta caccgaacac ggtaaattaa tcaactctgc
    29041 cgagtttgac ggcttggaat ttgatgtggc tttcactgcg attgccgata aattagaggc
    29101 aatgggtgta ggtaaacgcc aagtgaattt ccgtctgcgt gactggggtg tttctcgtca
    29161 acgttattgg ggtgcaccaa tcccaatgat gaccacagaa gagggcgaag tggttaccgt
    29221 tccattacaa gatttaccgg tgattctccc tgaagatgtg gtaatgaacg gcgtgcaaag
    29281 cccaatcaaa gccgacccag agtgggcgaa aaccacttac aacggcaaac cggcattgcg
    29341 tgaaaccgat accttcgata cctttatgga gtcctcttgg tattatgcac gttatacttg
    29401 cccacaatat cacgaaggaa tgttagattc agacgaggca aactactggc taccggtcga
    29461 tcaatatatc ggcggtattg aacacgccac aatgcacttg ctctacttcc gtttcttcca
    29521 taaattgttg cgtgatgcgg gtattttaaa ttcggacgaa ccggcgacta aactgttatg
    29581 ccaaggtatg gtgcttgccg atgcgttcta ctacaccagc ccaactaacg agcgtatttg
    29641 ggtcagcccg acacaagtca ccttagaacg tgatgagaaa ggtcgtatca tcaaagcaac
    29701 cgatccacaa gggcgtgagc tggttcacag cggtatgact aaaatgtcga aatcaaagaa
    29761 caacggtatc gatccgcaag aaatggtgga aaaatatggt gctgacacag ttcgcttgtt
    29821 tatgatgttt gcctcccctg cggaaatgac attagaatgg caagaatccg gcgttgaagg
    29881 ggcaaaacgt ttcttaggtc gtgtttggaa tttagtttat agctatgccc aaaatccggc
    29941 aacgactgca ttagatgtga atgccttaga caaggatcaa aaagaacttc gccgtgatgt
    30001 acacaaaacg attgctaagg tgagtgatga tattggtcgt cgtcaaacct tcaatacagc
    30061 gattgctgcg gtgatggaat tgatgaacaa gctcaccaaa gccccacttg aaaccgaaca
    30121 agataaagcc gtaatggcag aagctttaag tgcggtggtg cgtatgcttt acccaatcac
    30181 gccacatatc tgctttgagt tatggcaagt gttaggtaat gaacaaacca tcgattttgc
    30241 cccttgggta caagccgatg aatccgcaat ggtggaagat gaaaaattag tggtagtaca
    30301 agtcaacgga aaagtgcgtg gcaaaatcac tgtttcagct actgctacgg aagatgaagt
    30361 taaagctatc gctaaagccg atccaaacgt tgctaaattc ttagatggtc agcagattgt
    30421 aaaagaaatc tacgttccat ttaaaatgtt gagctttgcg gttaaggcgt aacaaacaca
    30481 ctctccctta tatgggagag agaccgataa atatttcgtg cagaaatatt tatcagagag
    30541 agggtacaag cggttatttt cttggaaaat tttgcaaaaa atagccccct ctccctgctt
    30601 tttcttctaa acgaagaaaa acctgtccct ctcccacaag gggagagggg aataaacaag
    30661 gaaatctcat tatgattaaa aaactctctc tcatcgctgt ttttgctctt accgcctgcg
    30721 gttggcactt taaaaacaat gaggtattac ctgaatcgtt cagaacatta acctttgaaa
    30781 gtgcagatca acacagcgaa atgtctcgaa ttttacgcaa tcagttacaa ctaagcgatg
    30841 taaaattagt gcctagcacg gctaatgtgg caaaattacg tttggtttca acctcaacag
    30901 acagcaaagt ggtttctgtg tttaaacaag ctcgtgaagc agaaaaaatc ttaacgctaa
    30961 acgttgatgc gattgccgat attccaaata aagggcaata ccctttagaa gtttcggttc
    31021 atcgtacttt ctttgatgac tctcgtgcag ctttggcaaa gtctgctgaa aaagagatga
    31081 ttatgaaaga tatgtatgaa caagcctctc gccaattaat tatcaaaatg gcgggcttaa
    31141 aaaaagaact ctcaaaataa tcattgtagg ggcgaaatat gtttcgccca ttgtttatct
    31201 gtatgcaaaa aatctttccg gaaacacttc aattttcatt aaacaaagga ctacagccct
    31261 tttatctatt aacagggaat gatctgctat tggtgaatga aaccaaagat gccattattc
    31321 acaccgcccg tctcaacggt tttgatgaaa aaaaagaagt tgaaatcaaa aacgatacta
    31381 actgggaaga acttttcgaa gcagctcaat caatgggatt gttttttgca cgccaaatta
    31441 tggtgctgaa ttttccggat tcccccacag cgacacagtt taaaaaactg gctgagcttt
    31501 gtgcctttat tcatagtgat ttgctcttta tcctgcactt acctaaattt tccaaaacaa
    31561 tggaaaaaca ggcttggttc acgcaaattg agctaaatct cgtgcaaatt aactgccaaa
    31621 caccggaact tagcaaactt ccacaatggg tcagtcatcg agcaaaagcg atgaatttgc
    31681 aaattgaaaa tgaagcaaac caactccttt gttatagcta cgaaggcaat ctactggcgc
    31741 ttaaacaggc attacaactg ctacaactca atgcaactga tggaaaaatc acgctgacaa
    31801 aagcccaaga agtggttgaa cactccgccc aatttactcc atttcaatgg attgatgcat
    31861 tatttgaagg aaaaatccaa agagctcaac gcattttgta ccatctgcaa aatgaagaag
    31921 tacaagcggt cgttttatta agaattgtgc aaaaagagtt gatgatttta ctcgaaatca
    31981 ctcgcaaccc aaccgcagtc gtttccagcg aacaatcact ttttatcggt aatttacgaa
    32041 cagaatttga ccgcttgaaa atttggcaaa accgcagacc tttttacaac cagatcactc
    32101 aacgactgac ttaccaaaaa ctttacgccc taatccaaca actggctgaa ttagagcgta
    32161 aggtgaaaca agaatttagc gatgatattt ggcaagaatt agagcgtttt tccgctcaat
    32221 ttacctaact aatacttttc taaatcttcg ctaaacaact ccgcttcttc actggcgata
    32281 gagtgctttt ctgccgccca atcgcctaaa tcaataattt gacaacgctc gctacaaaac
    32341 gggcggtatt tactttcttt actccacacc acttcttttt cacaagtcgg gcagtttaca
    32401 atagtttctg gcattctttt tccttttttg ctaatgctaa gtatttataa tgtaaggctt
    32461 gaacctgctc tttaattaaa agcaagccct gttcaaatgg caagttattt tcaatcacat
    32521 catcagcata acttaatctt tcttcacggc tgacttgggc tgccataata tttttaatgg
    32581 tttcaatttt actgttatca cgtttggttg ctctttccag ttggatttca ggagaaacat
    32641 caacaaccaa tatacgatca caatattcgg tgagcttatt ttcaattaaa agcggcacga
    32701 cccaaatcac ataacaagcg gtcgattctt gcaatttttt taccatttct tctcgaatgg
    32761 cggggtgaag taaattattg agccacgttt tttcctcttc attgttaaac acaatttggc
    32821 gaagtttagt gcgttctaat gctttttcag cggttaagat ctcttcacca aaatgctcta
    32881 caatcttggc taaaagcggt gtacccggtt caacaacttg gcgagccacc acatcagcat
    32941 caattacctc taccccaaga gctgaaaata aatcagacac tgtggttttg ccactgccta
    33001 ttccaccggt taagcctaca acgtaagtca taaaaattga ttcctcaaaa taaaaacaaa
    33061 ccaattctag taattaatcc ctctgctttc aagcattagc accagcaaca tcgctgtgct
    33121 aataaacgga ataaacgcca attttgctaa tttctgcttt ttcattagcc aataagccaa
    33181 gtaataacca atccctagca ggctggcggt taatatcaat aagagcattt tttcgagccg
    33241 aaagagtggg gataacgcaa ccaataacaa catatcgccc gagccaaatg cctccttttt
    33301 aaacataagc tgtgaaacca agccaatcaa caggcaaaaa gcaagggtaa aggtaaaagt
    33361 ttggtgttgg aaatcggcta aactctccca taacaccaac aaaaatataa gcacgaggta
    33421 gcgaatatcc gttaggtaat agcacatatc cagcagtgat aaaaaacaga gcagaataaa
    33481 aatcgtgccg ataatagggc tttccgagca gagcataatc aatggaaaaa ggagaaaaaa
    33541 tagatttgcc gatcggggtt gtttcggttg tagcaccgat tgagccaaaa actgttgctc
    33601 ggttaagcca atattcacta atgaagttgt ttcttggtaa atttggcgat tgactcgaat
    33661 ggcaaatcga gggatctccg ctttgagcca aaccgcaatg aagagggaaa acagtattaa
    33721 catcgctact ccaccaaagc ccccatatca aaaatcggta aatacagccc aacaataata
    33781 gtgccgacaa tcacgcccat tatcaacatt agcatcggtt ctaatagctg agacaaaata
    33841 tcaatttggt aatctaattt ttgttggtac atctcactaa tatgctcaca cattttcgcc
    33901 acattgccac ttttctcccc aacctcaagc atttgtgcca tctcagcacc aaacacattc
    33961 gggttgatcc cttgtgaaaa tttgtagcct tgttgtaaca aattaagcat agtgccaatt
    34021 tcttgctgta aaatcgggtc atcatttttc tcggataaaa acgacctcaa ggcaacatca
    34081 agcggaatat gagcattcag cattaaggca atattttggc tgaaaaagat aatgcgagat
    34141 tgctcaataa ttcggctaaa cagtggcatt ttagcccata gagccatttt ccactttgcg
    34201 actaacctgc tcttttttgc aaaaaacagg taaaaaatga ccgctagtag taacgtgcca
    34261 agtaatactg tgccttgctc aatcaagcat tcggaaaggg taaataaaat atcggtaatg
    34321 aggggtaaag ttttgtcttt tgagccataa agttgggcaa actgcggtac aatcaaaacc
    34381 aatagcccga tagataaagc gagcgaaatc agcaacacaa tcaccgggta aaacaggatt
    34441 ttcttcactt ttttcgccaa tttttccaat ttcgctcggc tttcagctaa attagtcagc
    34501 ataatgccca gttttccgct ttgttcgccc attttgatta gctgaatttc ctgattggtc
    34561 acaaattcac ccaatttctc caacgattgt gaaaaagcat agccactttc aatatgctga
    34621 atcagctcat taagccatag ataaaggcgg atatttcggc agttttgcaa caacatagat
    34681 aatgcctgtt ttaacggcat ggcagaatta accaacaatg caagctgtga tagcaagcta
    34741 ttcacctctt cttttttcgg gtttgctgaa agcacaaaat ttcggctaat ccgaatatgc
    34801 tgataacctt gtgccagcaa aaggttttcc aacatgtctc gattcgttgc caaccgcttg
    34861 ccccgctgtt tttgcccaaa tcggctctgg gcttgccaat gaaattcata gattttcgtc
    34921 attgcctaag caatttctct ttttgtggtt caaaatgaat atctgaggcg ttgtgttgca
    34981 aacagaactt aaataaattc tctaaaattt ggataatcgg atcgtttcta tccacttgtt
    35041 ccgaatgagc caatgaatac gccgtattct cctcataaat ctcactctgc cgactactct
    35101 gctcaggcga aagggcattg agtaaaaact tcaattcatc ggaggaaatc aaaacaggct
    35161 caatctgttt gtggtagata aacgcaaaaa tctcacaggc attgagattt tgcatatcat
    35221 caatccctag ccaaagctgt tcttctgttt cttgcagcgg aatggctaaa tatcgcaata
    35281 aaatctgctt ttcattgcaa tttttctgcc actgctctgc tgaaatctcg atgaaccttt
    35341 ggctgtttaa atccgttacc gaatactcca ttttgatttc ctcacctcaa attagccgtt
    35401 tggtgtaaca gttgtgctac agaaattagc tggaaatagg ctcgtatcat tgccactaca
    35461 acttgccgtc caactaatcg tattatttga gaacgacggt gttaaggtat agccataacc
    35521 attcagagag cctttgccgg ttaccgtaat cacgcctttt gttaccgcaa ttgagtttag
    35581 gtatttagtg gtattactac tggttttatt cgcctgaatc ccattcgtgc caccggagca
    35641 gttatccaac ccgccactgt tgtaaataca gacttcaacg tctgatttat acgaagcaga
    35701 tgcttgtaat aactccgata acgccgcctt ttgggtgtat gagttatagg aagggatcgc
    35761 aatagtggca agaatggcaa taatcgcaat cacgatcatc aactcaatga gggtaaatgc
    35821 ccgatgcagt tggcgaatgc caagcggtct aaaatgtaca attttttgca tataaattcc
    35881 ttataaattg caccaacaaa ttgtggcgaa tcaagtgtgc aaattttttg cctgctttgc
    35941 gaccggcaaa ttttaatttt tcgacgcaga tcgaaaaaat aaaattttta tctgtttatc
    36001 catacagttt tttgttagaa tttgccaaat ttactcaatt aggaatcaag aatggcaaaa
    36061 gcacctaaaa ccgcttatgt ttgtaacgat tgcggggctg aatattcccg ttggatgggg
    36121 caatgtaagg aatgtaaggc ttggaatacc atcagtgaag tgcggttgat ttccagcaaa
    36181 gaagcggcga aatctgaccg ctttagcggc tatgccggtg aaacgtcagg caaagtacaa
    36241 acgctgtctg acatcagctt gcaggaagtg cctcgcttta gcagtggctt taacgagctg
    36301 gatcgtgtac tcggtggcgg cgtagtgccg gggtcagcaa ttctgatcgg cggtcacccg
    36361 ggggcgggga aaagtacgtt attactgcaa gtaatgtgcg gtttagccca acatctgcca
    36421 acgctgtatg tcaccggtga agagtcgtta caacaagttg caatgcgggc aaatcactta
    36481 ggcttaccaa cggcaaatct gaaaatgttg tctgaaacct ctgtcgagca tatttgcaat
    36541 attgcagatc aagaaaagcc caaaattatg gtgattgact cgattcaggt gatgcacttg
    36601 tcggatattc agtcctcacc cggcagtgtt tcacaagtgc gtgaatgtgc atctttcctt
    36661 acccgctacg ccaaaacccg ccaagtggcg attattatgg ttgggcacgt cactaaagat
    36721 ggcacgcttg ccggcccgaa agtgttggaa cacgccatcg atgcttcctt gctgttagaa
    36781 ggcgaatccg attcccgttt ccgtactttg cgtagccaga aaaatcgttt tggtgccgtc
    36841 aatgaattgg gcgtatttgc gatgaccgaa caagggctaa aagaggttaa aaacccatct
    36901 gcgatttttt taagccgtag cgaagagcaa acgccgggca gttcggtgat ggtgttatgg
    36961 gaaggaacac gcccattgtt ggttgaaatt caagccttag tcgatcactc aatgctggca
    37021 aaccctcgcc gtgtggcggt tggcttagat cataaccgtt tatcgctatt acttgcggtg
    37081 ctacaccgac acggtggctt gcagatgtcg gatcaagatg tgtttgtaaa tgtggtcggt
    37141 ggggtgaaag tcacggaaac cagtgccgat ttagccttaa ttttggcgtt aatttccagc
    37201 ttccgtaacc gtccattgcc gcaagatttg gtgatttttg gggaagtcgg cttagcaggg
    37261 gaaatccgcc cggttaccag tgggcaagag cggatcagcg aagccgcaaa acacggcttt
    37321 aaacgagcga taattcctca cggcaatgtc ccgaaaaagg caattaaaga tatgcaggtg
    37381 ttcaccgtga aaaaactcag tgatgcgtta gatattctgt ataatctcta aaatcaagaa
    37441 ccgcttgtaa gtctgtctta caagcggtct gttttaggta aaaatttacg aatgtgcggc
    37501 agttggtcta ttgcctttgg aaatatagta taaattaata cacaccacca acgcatttaa
    37561 gccggtgacc ggaatcgagc caatcagcaa accataaaca acgaaacagg cacaacccag
    37621 cgaattcacc acccgcagtt taatcacatc ttttaataaa aaagaacagg caactaaaat
    37681 catcgccaca tagccgagta tttcaacata gtccatttag aacctcctca aataaaataa
    37741 actgccgata ttttaaaggc tgttttttta tttgtatcta gctctaaaaa tagcaaaggt
    37801 ttgcgttcac atttttactt ttaaccgctt agttattaaa cagattttcg ttctaaacac
    37861 ataaaacggc aacggaaagg gttattttca tcaatttctg accacttttc ttctactaac
    37921 gcccaatttt gttcatcaaa ttcaaagaac gtatcccctt caatgtctgc ttgaatctca
    37981 gttaaataaa gtctttctgc tagtggtaag gcttgcttaa acagttcccc cccaccaata
    38041 atcattattt cagctgtatt tgcaaaattt ttcgctaatt caaccgcttg ttcgagcgat
    38101 tgtaccgcat aagccccttc caccgtaaaa cctgaacggg aaagaataat attagggcgt
    38161 tttggcaata acctgccgat agattcatag gttttccgcc ccataatcac cggtttgccg
    38221 agcgtgtttt ggcgaaacca ggctaaatct accggcaaat gccacggcat ttggttatct
    38281 ttgccaatca ccttgttgat tgttcgggca acaataatgc tgattttcat tttttctcct
    38341 gttatgcaaa ttggtttgat tttatatcaa attaagcgtg attttacacc ctaaaagtga
    38401 tacttttggc aacattattt ttagttacaa gtgaacagat tatgtcaaaa actatcgtga
    38461 taaaatttgg caccagcact ctcacacacg gcactaaaag tttaagccgt ccttatatgt
    38521 tagagctggt aaagctcaat tacaccaaca gcatcgtgtg attgtggtga catccggagc
    38581 tgccgctgcc ggtcgggact atttaggaca ccctgaactc cctaaaacct tagcctctaa
    38641 gcaaatgtta gcagcggtcg ggcaaagtca gctcattcga gtgtgggaaa atttattcga
    38701 tatttataat atccatatcg ggcagatgct cttaacccga gccgatctgg acgatcgtga
    38761 acgtttcctc aatgcccgtg atacccttga tgccctgctt gcacaaaaaa tcattccggt
    38821 gattaatgaa aacgatgccg ttgctaccga agaatttaaa gtaggcgata acgataattt
    38881 atcggcttta gttgcgattt tggctcaagc agatcagctc tatttattaa ccgaccaaga
    38941 aggcttattc agtgccgatc ctcgctcaaa ccctgatgct aaattgctct cggtggtgga
    39001 aaaaatcacg cctgaaatcc gccaaattgc cggtggtagt tcaaccggtt taggcacggg
    39061 cggaatgagt accaaaatta ctgctgctga tattgctacc cgctccggtg tggaaaccat
    39121 catcgcctcc ggttctcgcc caaatgtgtt agttgattta gcaaacgggc aaaacatcgg
    39181 cagtaaattt ttagtccaat ctgaccgctt ggaaggcaga aaacgctggt tatttgctgc
    39241 tccgcaagtg ggtgaaattg tggtagattt cggggcggaa caagccttgc ttcaacataa
    39301 atcattactg ccggtgggag tttctgccat caaaggcgaa tttactcgag gtgaagtaat
    39361 caaaattttc agccaagacg gcaaagcctt agcactcggc attgcccgtt atagcagtga
    39421 ggcattgctg cgaattaaag gtaagaaatc aaaagaaatt gaatcgctcc ttggttatga
    39481 atttggttct gttgcagtgc atagtgacga aatggtggtg tattaatgga attgggaatt
    39541 gatgttttag caatcttgtt tgccgttgcg acccttgccg gctttatcga tgccatcgct
    39601 ggcggcggtg gcttactcac tattcctgca ttaatggcag cagggcttcc tccggcaatg
    39661 gcacttggca cgaataaatt acaggcgtgt ggcggatcac tctcttcctc actctatttt
    39721 attcgcaaaa aagctgttaa tttaaaacaa atttggttgc taattctatg cactttttta
    39781 ggctctgccg ccggtactat ttttgtgcaa atgatcaatg tcgatttctt aaaaacattg
    39841 ttgcctttct taattctgat tatcggcatc tattttttgg tcagccctaa aattggcgat
    39901 gaagatcgta aacaacgcat tagctttacc ctatttgcct ttaccgccgc tgtcgctctc
    39961 ggtttttatg atggaatgtt cggaccggca accggctctt ttatgactct ggcatttatt
    40021 ttgctgctcg gcttcaacct ctctaaagcc gtagcacacg ccaaagtgat taattttacc
    40081 tccaactttg cctcattaat tttctttacg cttggtggtg cggtaatgtg gaaaatcggc
    40141 ttaattatga tggtcgggca atttattggc ggcacactag gtgcgaaaat ggtgatgaca
    40201 aaaggcaaaa aattaatccg tccgatgcta gtgactatgt cttttatgat ggtcggcaaa
    40261 atgctctacg agcaaggaat ttttaattaa caatgaataa agcaaaacgt attgagattt
    40321 taacccgttt acgcaatgaa aatccaaaac cgacaactga actcaattac agtaatccgt
    40381 ttgaattatt aattgccgtg attctatccg cccaagcgac cgataaaggc gtaaataaag
    40441 ccaccgataa gctcttccct gtcgccaaca cgccacaagc gattttagat ttaggcgtag
    40501 atgggctaaa agagtacatc aaaactatcg gcttatttaa cagcaaggca gaaaatatta
    40561 tcaagacctg ccgagatctg atcgaaaaac ataacggcga agtgcctgaa gacagagatg
    40621 ccctcgaagc ccttgccggt gttggcagaa aaaccgccaa tgtggtgatg aataccgcat
    40681 tcggacaccc tacgattgca gtcgataccc atattttcag ggtgtcgaac cgcacgaact
    40741 tcgctcccgg caaaaatgta gttcaggtag aagaaaaact gctcaaagtt gtgccggacg
    40801 aatttaaagt cgatgttcac cattggttga ttttacacgg acgctacact tgcattgccc
    40861 gtaagcctcg ttgtggttct tgtattattg aagatttatg tgagtttaaa gagaagacgg
    40921 aataacatta tctggtggta tttaatgaat aactcccctc tttagaaaag taggggctgg
    40981 gggagatttg atactatttc aacatttcgt atgagcgtat agaaattctg ccaaatcttc
    41041 cctatcccct ctttgctaaa gaggggaact agatcgagcg taaaatataa caagcggtca
    41101 tttttttgag attttttgca aatggatatt tatttagtcg gtggagcagt gcgggatcaa
    41161 cttcttgggc tgccagtgaa agatagagat tttttagtgg ttggcgcaac tgccgaacaa
    41221 cttttagccc aaggatttca acaagttggg gcagattttc cggtgttttt acaccctgaa
    41281 accaaagaag aatatgccct tgctcgccaa gaacgcaaga acggcaatgg ttacaacggc
    41341 tttatttgcg atttctcccc aaacgtcacg cttgagcaag atttgatccg ccgagattta
    41401 accattaacg ccatcgccca agatgaaaac agcacacttt ttgatcctta tggcggtgtg
    41461 caagatttag aaaatcggct actccgccac gtttctcctg cattcagcga agatccgcta
    41521 cgggtgctac gggttgcccg ctttgccgcc cgttttcatt catttggttt taccattgct
    41581 cctgaaaccc tgaaattaat gcgagagatg gtacaaagcg gtgaattgaa acatttaacc
    41641 gctgaacgtg tgtggttgga aacacagaaa gcctttgaaa ccgataatcc gcacgtttat
    41701 tttgacattt tacgcttaat tggggcatta aaagtgctat tccctgaact ggatcgtctg
    41761 tttggcgtac cacaaccacc tcaacaccac cctgaaattg actccggcaa acacactcta
    41821 atggtgctac aacaggcaaa aagacttgca aaaaaagcgg aaaatccgac cgctttactc
    41881 tttgcagccc tttgccacga cttaggcaaa ggcttaacgc ctgctgatat tttgcctcat
    41941 cactacggac acgaagtcaa aggcattcaa ccaacccgag agttagccaa tcggttaaaa
    42001 atcccaactg agattaaaga ttttgccctt ttagtgaccg aataccacac gcattgccat
    42061 aaaatggcgg aacttcgccc tgaaacggta ataaaactgt ttaacagcct agatgtgtgg
    42121 cgtaaaccaa accgcttttt tgatttcctg ttcgcctgtg aagcggatgc tagagggcga
    42181 ttaggttttg aacagcggaa ttacccccaa cctgaattgg cgaaaaaata ttaccaagcc
    42241 gcaatcgaaa ttgatgtgca gcaagttatt caagacggtt ttgaaaaaca agcaattcgg
    42301 gaagagctga ataaacgcag agtgtatgcg gtaagaagca tcaagctaga tagcgaccta
    42361 ataaaccatt aggttatccg ccactttctc aaaatcaatt cccaaagttc aagttggtta
    42421 aatgtatgga ttctttaaaa ggtggcgtta ttttagtgaa tttataatgt tcctatgctc
    42481 ttgattgttg tagccacaat ttcagggtaa agatcagcaa taacccaatg ccgaaattgg
    42541 caatagtgaa gccggctaac ccaataaaag ataaaggttc aaattgataa aattcaatcg
    42601 cacctcttgc cattgcagct aaaccaaatg aaaatgccca gaaacccatc gagaagccat
    42661 tttcagctat ccatttgagg tttcgtaaaa taaaacagaa ttgtaagaat ccatatcccc
    42721 ataacatttt tgccaacaag tctaattctc cacccataga aaaataggca gaagcgccca
    42781 caaatgccgg agcaagaaca attcctaaag atggtctagc aatcggaaaa agcggactaa
    42841 gccgaattct ttgtaacata gtgggttcat atactaacca ggaaattatg ccaatgccta
    42901 aaaataaaga tgcaatttca ctgtagccaa ttaagcttaa tgaacttgcc atagtgaagc
    42961 tccctgcaat tggcggtagg taatgtaccg ggtgtagcgt ttccggcaaa aattgtgtgc
    43021 ctttccataa tccaccaata ataaaaacca agaaaattaa atgcacaatg acgcctaaaa
    43081 aaatcaatag ttcgcctaaa taaaaatccc atacatagag cacatcaccg cttatcatgg
    43141 ttgtcattgt cactaaggaa aataaacaac attgcactgg gtgcataaat tctgctttaa
    43201 tctgctcaaa acaaaaaaac acacgataca cataacagcc taataaggct acccaaagta
    43261 tgactgacgt tccagcaatg atattaccaa ttgttgtagc ataaggagtg ataggcgttg
    43321 catttaacca ggcaaggcct aacgccccca gccctaatgg cattgcaaaa aagcctgtag
    43381 ttattggaaa aggtttagat tcactcataa atttatcctc atattgaaat aatgcataac
    43441 tgtattcggc tttataacag tcatatgtaa aaaattttat ttttctaacc gcttgtaata
    43501 agaaaaacct aaagcacttg ctttaggttc ctactactat tcatactctt ctagccagat
    43561 agttaaaatc gcttcaagaa tatgttcatt tgatgcttcc ggatcatcat cgaaatcttc
    43621 catttcacaa atccatttat gcatatctgt aaaacgaacc gtggtcgggt ctaaatccgg
    43681 gttcatatca tacagatttt cagcgatcat tcgggtatct gtccatttca ttagtgcgct
    43741 gcctcatttg cgtgatttaa attatatttt ggaatttcaa caaccaaatc ttcttcacca
    43801 acaatacatt ggcaacttaa acggctgtct atttccaatc cccaagcttt atccagcata
    43861 tcttcttctt gatctgaagt atcatttaac gaatcaaaac cctcacgaat taccacgtgg
    43921 caagtggtac aagcacaaga acagtcgcaa gcgtgatgaa tttcaacgcc tgcttcgtgt
    43981 gctacttcta ataaattatc tccggcttta gcttcaacaa ccataccttc cgggcaaaat
    44041 tcttcgtgtg gaagaaaaac aatttttggc attttaaagt ttccttatta ctaatcccat
    44101 tcaatattat ccagatgttc gccgatgaag tttaaaatct cttcctcatt ttcaaccaga
    44161 taaacaataa tcttctttaa ttcccttgct ttctctttac ttttctcgga aagcggatag
    44221 gtaacataat aacatcctac gtccggatct tcttctaata actctaatag gcttggacga
    44281 taaatactaa gataagcccg taaaaatgca gcccagttat aaccgttcat ataggcaaca
    44341 tcatattcag tattaatccg ctcgcccaac tcaaaaatgc ggttatcctc taaatcgaat
    44401 tcaaccgcaa cggttctgaa ttgttctgaa atctcggttt ttacatagtt agacatactg
    44461 cctccttatg ctaaatcgtc cattttttta ccggctaatg ctttttgaat tgataaattc
    44521 atacgccgtg ctgcaaattc ttgcgtagct aaatccacct ctttgatacc ttgctgaatt
    44581 gcaaagcgat cagtaccttc ttttaattcg attaaacggg ctaattgtgc ttcaatcgct
    44641 tggaactcct ccacactcaa cactgcagag ccatcttctt tcaatgccgt taccacgctg
    44701 tcaatcactc ggtcggcttc tactcgctgt tcaactaact ggcgggcttc catatcttct
    44761 ttggcatttg ccattgagga tttaatcatc tgcgtaactt cttcatcggt taagccataa
    44821 gacggtttga tttgaattga agcctgcact ttggtcgatt tttccattgc agtcacgttt
    44881 aataaaccgt ctgcatcaac ttggtaagtt acccgaacct gtgcaacccc tgctgccatt
    44941 gccggaatgc cacgcaaagt gattttaccg agagagcgac aatcttcgac taattcacgc
    45001 tcaccttgta aaacgtggat tgtcatcgcc gtttgaccgt ctttaccggt agtaaactct
    45061 tgagctcgag ctactgggat agtagtgttg cgtggaataa ttttctccac caaaccaccc
    45121 atcgtttcaa taccaagcga aagtggcaca acatcaagca acaacatatc ggaatccggt
    45181 ttgtttccaa ctaaaatatc cgcctgcact gccgcaccaa tggcaacaac tttatccggg
    45241 tcgatagagg ttaatggcgt tttaccgaaa aactcgccga cttgttcacg cacaaacggt
    45301 acacgggtcg aaccgcctac cattaccact tcacgaacct cttctgcttc aactccggca
    45361 tctttcaagg ctcggcgaca agtcatcagc gagcgtttta caagcggttg aattagctca
    45421 ttaaattgcg aacggcttac tacgcctgtc caatttgcaa atttcacttc aaattcaacc
    45481 gcttgcgaaa gtgcgacttt ggtttgagtt gccaaagtta ataattcacg ctgctcgctt
    45541 gccgtttgag gtttgtaatt tgcctgttca gcaatccatt ccgctaatag gtggtcgaaa
    45601 tcatcgccac cgagtgcggt atcacctgcg gttgctaata cttcaaacac acctttgcgt
    45661 aaacgcaaaa tagataaatc gaaagtaccg ccacctaaat cgtaaacggc aatcacacct
    45721 tcttgtccgc tttctaaacc ataagcaatc gctgctgccg ttggttcatt gagcaaacgt
    45781 aatacattta aacccgcaag acgtgcggca tctttggtac tttggcgttg tgcgtcatca
    45841 aaataagccg gtacggtaat taccacgcct gaaagctcac cggctaaacg cttttcggca
    45901 aattgtgcca agtggcttaa aatatccgcc gaaacttcaa tcgggctttt attaccttgc
    45961 gctgtttgga ttaaaggtaa accgttttcg ctcgcgacaa attgataagg taaattttga
    46021 taacgttgct gaacatctgc cagagaacgc ccaatgagac gtttagctga aatgacggta
    46081 tttttcgggt caagtgcagc tttggcaaag gcttcaatcc caactgtttt ttctgtttcc
    46141 gcataatgca ctactgacgg cactaatgct ctttcttgtt catcaagcaa tacctgagtc
    46201 tgcccgctac gcacagttgc cactaatgaa ttggttgtac ctagatcaat tcctaccgct
    46261 aatttatgtt gatgtggtgc agcggtttga ccgggttcag aaatttgtaa taatgccatt
    46321 tatttatctc tttatctttc taacttagtt ctctattgta ttaaatggag tgaaatatat
    46381 tgtttaagag aagctggaga ttcccctctc cctgattttt cttctgaacg aagaaaaatc
    46441 tatccctctc ccacaagggg agagggttat tctttcaaaa attcaaaaca actaaaaaat
    46501 tagcattctc cttttgtagg agaaaatgtt gttctttcaa aattctaaaa taaccgcaaa
    46561 attaactctc gccccttgtg ggagagagac agataaatca ttcgttcaga atgatttatc
    46621 agagagaggg ggaattaccc tctcgtaatt tcataaaaaa ttgtatctaa aacagcctct
    46681 agatcgctat gaatttgatt attccaaaat cttaaaaccc tgaacccctg accgtttaaa
    46741 aaatgagttc gtagattatc atagttttgt tgatctaaat gttgtgaacc atctaattca
    46801 ataactaatt tcgctgaaaa gcaaacaaaa tcgacaatat agttacctat aacttgttgc
    46861 cgtttaaatt ttatcgctaa aaatcgtttt gctcttaatg cttgccaaag aaccttctct
    46921 gcttctgtca tattagtccg aagctgttta gctctttggc ataaaattgc tttcattttt
    46981 tattcctctt ttttaattta gtataaaagg aataaaaaat ataatttgag cgatttttgt
    47041 gatctaaatc gaaaatcaga aaatttcttt cgttctaaaa aaataagcta aacagcctat
    47101 atttcagcct ctcttacaaa cacttaagcc accgaatatc ccatattttc aggggcaaat
    47161 tcgccttggt agtggcgttc aatcggaacg gcgattttac ttgtaagatc cagcacttga
    47221 tgcccttgta atttctctac atcggtttgc cagttttccc aacgcaaatc ctgataaaaa
    47281 tggtttaaat ctccggctaa tgcccagcct agaaattctg aataacctaa ttgggtgttt
    47341 tcccattttt tagcttttgg atgataataa taaactttgc caagatctga gccgattccg
    47401 ccggcattaa tggcaaaata gccaccgatt gcatcatccg ctaccagcaa gtggcttggt
    47461 tgttcgccag attgtttaaa agttttgcca aagttccaat caaataagcc tcgaggcaat
    47521 ttttcgttgc ctgagcctaa aatgcgtaac caaccgtggt caataaatac gccaccggtt
    47581 tcatacacca ttgcccctag cggtgagcga gtagaaagtt gcataccaac caatgcactg
    47641 ccggcatctt cagggtaact cgctaaaatt tcgtaatgat ttttggcttg ggtaaaccag
    47701 tctcttaaaa ttaaccaagc cgattgttta tctaataatt gttctaaatt tttcatttgc
    47761 aaaatttcct tagaatttga ccgcttgcga aaaccataca aatgtaggat taatagtcaa
    47821 agaatttttc ttctactttc tcaatctgaa taattaattt tttaaagtaa cggagcttgt
    47881 cggttaacgc attggctttt tgccagtcgg ctgtatttaa cgtttgttca agctgttcta
    47941 atactgcttt ttgttccgct ttaatctgtt ttaaaaagac ggtcagttcg gtttcgtctt
    48001 tacgatgctc aatggtttcc agtttttcgt gccattcgag ttgctgcatt aagaaatcca
    48061 catctcgcat acttttttct tcgagatttt tggcttcacc tgtatggatt tcaatcatcg
    48121 cttctgcccg taaaatcgga tctttaagaa tattgagtgc ctcattgaca tcagcagatt
    48181 tttgcaccgc ttctaactgt tcagcacttg atttgtgggc aaagttatct gggtgaagct
    48241 gtttctgtaa agcaagataa cgctcagaaa gctgggcgtt atcaagttga aattgaacgg
    48301 gtaaatcaaa taaagtaaaa gggttattca ttacagttcc ttacacacta aaactttcgc
    48361 cacagccgca ttcgttttta acattcgggt tggtgtattt aaagccttcg tttaagcctt
    48421 ctttcacaaa atccagctgc gtaccgttta agtaagtcag gcttttttca tcgacaataa
    48481 cttttacgcc gtgttgttcg aaaacctgat cgtcttcatt taatacatca acaaattcaa
    48541 gcacataggc aagccccgaa caaccggaag ttttcacacc aagccttagc ccgatacctt
    48601 tacctctgtt ttctaagaat gtacgaactc ggtttgcggc agcttctgtt aaggtaatgc
    48661 tcatagtttt ccttatgtga atggattaaa tcaagataga aatagcaaat gcaagcggtt
    48721 aaattttgca aattttttgc aaaaatcgac cgcttgcatt gattgtatca tattacttag
    48781 cttgtttctc tttgtagtct gcaattgcag ctttgattgc atcttctgct aagattgaac
    48841 agtgaacttt taccggtggt aattctaact cttcagcgat atcactgttt ttaatcgcac
    48901 ctgcttcctc taatgattta ccttttaccc attcggtaat gagagaactt gatgcgattg
    48961 cagaaccaca accgtatgct ttaaagcgtg catcttcaat gataccttga tcgttcactt
    49021 taatttgtaa acgtaaaata tcaccacaag ccggtgctcc caccatacct gtaccggtgt
    49081 ctgatgcttc tttatcaaaa gtccctacgt tgcgtgggtt ttcgtaatga tcaattactt
    49141 tttcgctata tgccattttt gtattccttt tatttcctat ttccggcgaa acctatttcg
    49201 cccctacatt caatttacta tttgtgatga aagcttattt tgtaggggca aatattattt
    49261 gcccttgcaa aatttttctg aattagtggt gattccattc gattttagac aaatctacac
    49321 cttctttgaa catttcccaa agaggcgaaa gctcacgcaa tttcacgata gcttttttca
    49381 cgatttcaat agtatgatcg atttcttctt cagtcgtcca acgacctaaa gtgaaacgga
    49441 ttgagctgtg agctaattca tcgtcacgac cgattgcacg taacacataa gatggctcta
    49501 aacttgcaga agtacaagct gaacctgatg atactgcgat atcacgtaat gacatcatta
    49561 acgattcgcc ctcaacaaag ttaaagctga tgtttaggtt tgaaccgata cgtttgcctt
    49621 cttccattga accgtttaca tatacttctt caatatcttt aaagccgtta tataaacgat
    49681 cacgtaacac ggttaaacga gccatttccg ttgccatttc ttctttagcg atacgatatg
    49741 cttcacccat acctacaatt tggtgaacag gcaatgtacc cgaacgcata ccacgctcgt
    49801 gaccgccacc gtgaataatt gcttctaaac gcacacgtgg tttacgacaa acatatagac
    49861 cgccgatacc ttttggtccg tataatttgt ggcttgagaa agacattaaa tcaacattta
    49921 agtcttgtac attcacttcg attttaccaa cagactgggt cgcatcaacg tggaaaatga
    49981 ttttcttcgc acggcagatt gcaccgatct ctttaatcgg ttggattacg cccatttcgt
    50041 tatttacgtg cattaccgaa actaaaattg tgtccggacg aatagccgct tttaatttag
    50101 ctaaatctaa aataccgtct tcttcagggt ctaagtaagt cacttcaaaa ccttcacgct
    50161 ctaactgacg gcaagtatct aatactgctt tatgttcggt tttaacagtg ataatgtgtt
    50221 tacctttggt ttgatagaaa tgagccgcac ctttgatggc taagttatcc gactctgttg
    50281 caccagaagt gaaaacgatt tcacggctgt ctgcaccgat taaatcggca atttggttac
    50341 gagccacatc aaccgcttct tccgcttccc aaccaaattt gtgtgagcga gaagcagggt
    50401 taccaaagat accgtctttg gtcatatatt ccatcatttt tttcgcaaca cgttcgtcca
    50461 ttggtgtggt tgctgcgtaa tccaaataaa ttggtaattt cattgttact cctagttaaa
    50521 acaacccaag cggtcatttt tgataaaaaa tttgcaatta gtgatgatga ggatgatcgt
    50581 gacaatgctc tttttcacaa tcgtgatcag cgtgttctgc ggctaaatcc gcaactgaaa
    50641 ttgtccctaa aaactgctca atttgatctt ctaaccgctc ccacaaagaa tgcgttaaac
    50701 actgagaatc tttacggcaa ttaccactac ctttacattt ggtgacatca atattttcat
    50761 tcacggcgga gatgatcata cccacgctaa tctcttccgg ttttttacct aattgatacc
    50821 caccacccgg tccacgaacg ctctgcacga taccgtcacg gcgaagttga gcaaacagtt
    50881 gctctaaata agacagtgaa atcgcttggc gatctgaaat atcggctaag ctaaccggct
    50941 ctagttttcc gtgtaaagca atatctaaaa tggcggttac tgcataacgc ccttttgagg
    51001 taagcttcat aaaatatcct cattgattat ccagaaaatc ttctgaaaca gttgctaaat
    51061 tttgatatac cccaccaatt tagtcaatca tttaggacta attagtgtaa aaggttttat
    51121 atattaaaac agattaaaac aataacgctg attatacgaa aaaagagccg aaaataccaa
    51181 aataccaaag ataaacagtt catagaccgc acaatttcac tcttatttgc tcctaactga
    51241 tcggaacagt tgaaatttaa ttgatagaga gtacttcgac acataaaatc tgcactttct
    51301 tcttataact tttatgaatt attcattcta aaatatatat tttttaagag atttcctatg
    51361 aaaatgaaaa actttagcaa aactttaatc gcttcattag tagcattcag ctcagccggt
    51421 gcatctgctg ccgcattcca attagctgaa atttcaacat ccggtttagg tagagcttac
    51481 gcaggtaatg ccgctgtagc cgataacgct tctgttgttg caaccaaccc tgcgttaatg
    51541 acgttattta aacaaaccga aatttctgcc ggtggtattt tcgtagatgc tgatgtaaat
    51601 attgatggaa agctcaatgc tacaggtgca gatgcctcac ataaaaatgt cattcctacc
    51661 gctattgttc caaatgctta tatcgtttca cctatcaatg agcgcctttc tattggtggt
    51721 ggcgtaaatg taaattatgg tttgatatct gaatttgacc ctaactattc tgctggtttc
    51781 ttaggtggtc gtacatcatt aagtgctgtg aatgttaatt ttagtgcggc ttatgattta
    51841 ggttatggtt ttgtattagg ggcaggtttg aatgcagtac acgcaaaagc agaattagga
    51901 cgtttcttag gtgccggtgc ggcacgtttt gctccagcta aacaattttt ggaagacaag
    51961 aaagtacaag tacaaagtgc aattcaaggt ttaaaagctc ttgaggcagg tatcgcagca
    52021 ggtaataccg ctcttgaagc tcaaaaaaca caagtattag ctcaagtaaa cggtttatta
    52081 aaatctcaaa atttaaacca aaccatcacg aattctgctc aattagaacg tttggttaat
    52141 ggcattcaaa ataccaatgc aagttcaaca attcataaac ttaaaggcga taaatgggca
    52201 ttgggttgga atgttggctt ggtttataat atcaatgaaa gaaaccgttt aggttttact
    52261 taccactctg aaattgatct taaatttaaa ggcaaatatt ctaataccgt tcctgtagtt
    52321 attcctaaga tggtagatac cattaccggc ggtgcagaga ttgatggtac actaagatta
    52381 cgcctaccgg cattctggga agtgtcaggt taccacaaac taaccgataa acttgctgca
    52441 caatacagct ataaacgcac agactggagc aaattccaaa gcctagaagc ttatgatatg
    52501 caaggtaacc gcctattgca caaaaccgag aactttaatg actctcaacg tattgcatta
    52561 ggcttgtctt atgatgtgaa tgaaatgcta acattgcgta caggtgtagc atttgatgaa
    52621 agtgcaagtg taactcatcc atcaatctca attccggaca ctgatcgtgc ttggtattct
    52681 gtaggtgcaa ccgtgcgttt cacgccaaac ctatctgctg atgtaggtta ctcacatctt
    52741 cgtggtagca acctgacctt ctctgaagac ggtttagcca cattcaagag caaagctcgt
    52801 gcaaatcttt acggtttaaa cgtaaactac aaattctaat ttgatgaatt aaggtttaaa
    52861 gaggtgtaaa atcaattaca cctctttttt tattggcata aaaacatgaa atctcaaatt
    52921 tactacgatt actacccaag ccctatcggg caattattgc ttttagccac agaagaaggc
    52981 ttgatttaca ttgagctagg gcaagagcaa caaaccacct cgcttgataa tttcctttcc
    53041 gctcaagctg caagtggtca gattttagaa attttttgca aaaccaaaga aattttagac
    53101 cgctattttg ccggcgagcc attggatttt cagcagttgg attttcttgc cccgcaaggc
    53161 actccattcc agcaatcagt ttggaaaatt ttgcgtgaaa tcccttacgg gcaaactact
    53221 acttatggcg aaattgccac ccaactaggc aagccaagtg cgatgcgagc cgtcggcggt
    53281 gcagttgggc gaaacccgat ttcgatttta gtgccttgcc atagggtatt agggaaaaat
    53341 caagccttaa ccggattcgg tggtggcttg ccgaataagc gttttctatt acagctggaa
    53401 gatattacct ataaagataa aggcattgaa tttgtaaaac cgaaaaccaa gaaatggtaa
    53461 atacgttttg atagcacaag cgtccacgct tgtgcttcag atattaaaat tggtacaagc
    53521 gtggacgctt gcaccatcgt aacatttcaa atttactaaa tgtccccctt gcttctaaca
    53581 tattccttag ctaattgcaa atccatctgc catttggaac aaatcatttc cacccagtgt
    53641 gcaatatttt gctcccactg ctcgccgtta tcggattgag caagctgagc agtttgttgt
    53701 agctgatgta atccgactga tgctaatgct cccttaatct tatgagcctc gtccgccgtt
    53761 aatttacggc tttccacaga atttgtggtt tgccaatcac ttaaataacg ctgtaaattt
    53821 gccaaataag tgggcattaa atcagcaaat aaatccatat tggcaagcac attctctttc
    53881 cccattaccc caatcaattc attaagaatt gtaatgctat aaggtaaatt ctcagaacct
    53941 ctctctacaa gcggctgttt ttcttcattt ttttgcaaaa aatcatctcc aaaatgttgg
    54001 ttgagacaac gcattaattc atctaaagag agcggtttgt gtagcacatc gtccatacct
    54061 tgtgcttggt actcctgccg gctttggatc acatttgccg tcaaagcaac caacagcggt
    54121 aaatagtcaa tttcctcgtt ttcatattgc aatcttaatt gctgtgcaat ttcaaaaccg
    54181 gtggtatccg gcagttgaat atcaagtaaa atcagatcgt agctgttctg tgcaaaatgt
    54241 tggaacgttt cttcaccact cattgctaca tcaaccacgc aaccgatttt ctccaacatt
    54301 gctcgggcaa ccaccacatt catttcaatg tcttctacca atagcacctt aagggaatgt
    54361 tgctgaatag caaatatcgg cttggtttcc gtgctttctg cctgcacagt gagggtaaaa
    54421 gttgagcctt gattttcttg gcttgccacc accaaatcac cgcccattag cttcgcaatg
    54481 cgtttcgaga ccgataagcc aatcccgcta ccttgcgctt ttttctcttt agagttttcc
    54541 gcttggtaga acatatcaaa aattttgcgt tgatcttttt ccggaatacc gatgcctgaa
    54601 tccgtcaccg caaagctaaa ctgttcttta tctaattggt aaatttccag caaaattcga
    54661 ccgcttgcag gggtaaattt caccgcattg ctgatcaaat tccataaaat ttggctcaag
    54721 cgtgcgtggt cgatatagat atacttcggc aaatcaggcg gatacttcac ttcaaaatta
    54781 atctgcttat tgcccgccat aaaatgccca aaattagcaa tatcgtgaat gagttgttca
    54841 aattccacct cttttcttac caattcaatt cggctactat caattttttc taaatcaata
    54901 atatcgccaa aaatatgagc caatgcagtg gcactcatat tgatagtttt tagatattct
    54961 tgctgttttt cggtggtttt atcatctaac aaaatttggc tcaagccgat aattccatta
    55021 aggggagtac gaagttcgtg actaatggtc gccattaaaa tgcttttatc acggctgttt
    55081 ttttctaatt tagcgttaag ataggcatct tgttcccgga gttcttccaa atctcttact
    55141 gctttttcta atttcaagcg agatatttca agtttttcca ccaataacgt gaagaaataa
    55201 agcacaaaag gcgcagaaat taaaccaaaa gcgatggagc gtaaaatatc caccacgact
    55261 actcgcccaa taaaaagata ggttaagcta ctttgaatta aaattgccga aagagcgacc
    55321 ataaaaaagc ctaaaagaga agcttttaac cgccctagct ttaataccca attaatatat
    55381 ttttggctaa attttttaac ttgcatacga cctcaaaaca aaaagcagac catcagatct
    55441 gctttatttt actctatttt ttactttttg cctttgacta gctcatcagc ccataggaat
    55501 aattcattta catcataatc acctgaatgg ggtacattcc acggggtttc ataattaaca
    55561 tttttgcctg ccatttgcag ttttattgct aagattgcag aaattgccag cgaggtatct
    55621 ctatctgccg ttcccaccct aatccgccaa tgttccgcag catttgggtt atccaaatag
    55681 tgcatcgggt tcatccgttt cacgatttgc ggatcggcta aattgagatc tttattggca
    55741 gaacgttccg cactataaag cgtaaaatgg cggttatttt ccgtgtctgt gccaaataaa
    55801 ttattctcgc ccgaacttcc atttaacgca tcaaatgcag gtggtgattt catccgttta
    55861 tctgaaaaca cataaccaaa ccagtccaca ctgctgactt tgcctttctc aaatgaaagc
    55921 caactaattt gttgaaaggc tttttgctct tcgctatctt gaactaaacc tctataggct
    55981 ttatttgcag ccgtttttac cacttcagat aaataatctt taaacgagcc gttgcctttt
    56041 ggatcaagtg ttaaaggatt gcctttctca tcaaccaaat gcaaactgtt caaataagtc
    56101 ggaaagcgtt ctgctaattc attagaaact ttaatttccg cctcatttaa cgagccttca
    56161 attttcggct ttggttttgg ttttgagcgg tcgttaaact ctgctgcatt taatcgactc
    56221 atatcgattc ggctatattc attgacacca ttaaattgcc attcatacgc catatccgca
    56281 ttttcaaggt tggtaattgg gcaataggca gaaactgcaa aaattttgtc actggcattc
    56341 aatgcccccg cctctttcaa ataaggctca tagtcgtaat gatcagctga agctcctaac
    56401 aaagtagata atgctcctcc ggcactggtg ccgttagaga taattttatt tgcatcgccc
    56461 ggcatttttt catcattagc atgcagatac cgcactgctg attttgaatc aactacgtag
    56521 aatcattcaa ataacattca caaatacata gttattatga tgtatccagc caatacatcc
    56581 actgggattt tccatccgaa tttcggacaa tcctgatctt acacattctt tcagatttgt
    56641 aaagtctgaa aatcattttt atgcttgatt ttacttgaaa gtatctatct tggtctgaca
    56701 ttattccgtc ttattacagc tctttgaaca taaaatcgac tcatgtttgt ttacattcta
    56761 aatatatttt ctgtttaaat cgcaaagagt ttatcaaaag atgaagtcga tcatctcatc
    56821 gcgtctgcct ggttcatttt tgcatgatca ttgatcattt atggacaaga tgatatttat
    56881 aactgtcaat atagttaaaa aaat
//
LOCUS       DANLZQ010000004        53311 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.004, whole genome shotgun sequence.
ACCESSION   DANLZQ010000004 DANLZQ010000000
VERSION     DANLZQ010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 53311)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 53311)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..53311
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.004"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            216..428
                     /locus_tag="PXE50_000198"
     CDS             216..428
                     /locus_tag="PXE50_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000034825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HDL5621142.1"
                     /translation="MSAITGTVKWFNATKGFGFITPDQGGKDVFVHFSAIEANGGYRT
                     LEDGAKVQFEIQDSERGASAVNVKTI"
     gene            complement(488..1642)
                     /locus_tag="PXE50_000199"
     CDS             complement(488..1642)
                     /locus_tag="PXE50_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate MFS transporter"
                     /protein_id="HDL5621143.1"
                     /translation="MMKVSPFQWAAFNYFGFFCAYGVLLPFLPVWLKHHGYSTEMIGL
                     FAAVGYLFRFAGSMLASQRVKTVSQLIPTARSLTWLNIAAAAALLFSGDFIWLLFPVL
                     MLFQMFNSGAMPIADSIASIWQHQIGLDYGRARLFGSMAFVVGSLSAGYLIGLLGENS
                     VVWIIIGFLVFLGIGQLATPKVGFEEQGNKANTSSVTYRQLLKEPETLKMLIAVSLIS
                     ASHAAYYTYSTIHWSNASISTAMTSLFWGLAVVAEILFFLVSKRLFKSWKISHLMILA
                     AVFAVIRWAIMGSTTEIVLIIVMQMLHSITFGAAHIAMIRYISMQSAERVTKLQGLYF
                     GLASCAFMAVFTFIAGMVYQHSPSLTFWLMAIFTLPAIFIVPKRFEVQIN"
     gene            complement(1639..2457)
                     /locus_tag="PXE50_000200"
     CDS             complement(1639..2457)
                     /locus_tag="PXE50_000200"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HDL5621144.1"
                     /translation="MNEKKLAFIGTGNMAYAIIQGLLKSGYSAEQIIACNKSNLARRE
                     ELQAVGIATNFANREAVEQADVIVLAVKPQMMAQVCAEFADVDFSNKWVISVAAGISV
                     QRLETLLPSAKNIIRTMPNTPSLISEGMTGLFAKKSVNPTACQFAEQLMSAVGKCYWV
                     ETEEQINHIIAITGSSPAYFFRFMEAMQQSAVQMGFSEQDARTLVQSVALGAAKLVEA
                     NPTTPLSTLRENVTSKGGTTAKALEVFEQHDLAKTVDDAMWAAIHRAREMEQSL"
     gene            2534..3442
                     /gene="rdgC"
                     /locus_tag="PXE50_000201"
     CDS             2534..3442
                     /gene="rdgC"
                     /locus_tag="PXE50_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HDL5621145.1"
                     /translation="MVWFKNVMIYKLTGELALESNSLNELQQETRFTPCSQHDMSKFG
                     WATPLTGSDLLHFSQANQFLLISHKEDKLLPANVVKAETEQRIAELEEKEARKLKKTE
                     KQAVKDQVVSALLPRAFSKHQFTALWLDLDNQLVYVDAASSKRAEDTLALLRKTLGSL
                     PVVPISFTLPPAEVMTNWIAKGHTPSWLNLLEEAELKSFDTDSIIRCKRQDLETEEIA
                     RHLQAGKFITKLAIEWEGHFNCVLNEDATLSRLKFADEVREKNDDILKEDVAQRFDAD
                     FLLMTEELKLFTEKMIAEFGGIKSRI"
     gene            3463..4068
                     /locus_tag="PXE50_000202"
     CDS             3463..4068
                     /locus_tag="PXE50_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase family hydrolase"
                     /protein_id="HDL5621146.1"
                     /translation="MLDQTIIDQYDALIFDMDGTLIDTMPSHAKAWEKVGEVLGYPIN
                     PKPMYELSGSTTFVIAREIMQRSNIPEHYFEQVVQLKREFGIEMVLANATLLPAFEII
                     KANVGKKPMAIGTGSHRAMVELLDQKFNLRQYVSVIVDSDDVSNHKPAPETFLKCAEK
                     LGIAPHRCLVFEDADLGVQAALNGNMNVFDVRTNTITHSTR"
     gene            4084..4875
                     /locus_tag="PXE50_000203"
     CDS             4084..4875
                     /locus_tag="PXE50_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF998 domain-containing protein"
                     /protein_id="HDL5621147.1"
                     /translation="MKTEWIKHLIQQLTTLSKAIENYFTSGSFGVKFYPFLMHPCFRK
                     SCAFLIFIIAMVSSFSGLFYLVAEHITILFSERSLTTYFHHSTLELMIPVGTMIDEKI
                     SELSPLSVVMRSMFVLQAVVFFFIYAIGITHIAHNKLRVIGLLLSLCFAIGCSLVAGI
                     QPSSRGEFGIYNLGASITFLIGNLTLIIAGFDLYHPSMQFFKRFSIGAGVIGAICILI
                     TIFLPTLFSPLIERAGIYTIMLWEILAGFAIIKRLLKLPSFRQQG"
     gene            4879..6021
                     /gene="argE"
                     /locus_tag="PXE50_000204"
     CDS             4879..6021
                     /gene="argE"
                     /locus_tag="PXE50_000204"
                     /EC_number="3.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016533842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine deacetylase"
                     /protein_id="HDL5621148.1"
                     /translation="MKQIPFIQRYAQLIELPTISSLVAEEDLSNRRLIELLATWLADF
                     GFKTEILAVEGSRNKYNLLATYGEGEGGLLLAGHTDTVPFDEGKWRFNPFQLTEKAGK
                     LYGLGTADMKGFFAFVVEVVSQLDLTQIKKPIRILATADEETTMLGARTFAQHSHIRP
                     DCAIIGEPTSLKPIRAHKGHIGESVRITGRSGHSSDPAKGINAIELMHQSIGYLMKMR
                     DELREKYHNPLFQVTHPTMNFGNIHGGDAINRICACCELQFDMRPLPNMAVQDLYAMV
                     NEHLKPMLEQYGDLIEIRHLHDGIPGYECEHSAQIVQVVEKLLGEKCDAVNYCTEAPF
                     IQQLCPTLVLGPGSIEQAHQPDEFLEMKYIEPTKELLTKLIYHFCG"
     gene            complement(6168..6455)
                     /locus_tag="PXE50_000205"
     CDS             complement(6168..6455)
                     /locus_tag="PXE50_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5621149.1"
                     /translation="MPKSWELSLTARSNVIEILQSVEDYTGHWLSAVSLWEQLQNKLD
                     LIAFMPTIGRRREDGTLETFCRNYRIVYEIHLEKVYIITIIHSRRLYPRPS"
     gene            complement(6448..6639)
                     /locus_tag="PXE50_000206"
     CDS             complement(6448..6639)
                     /locus_tag="PXE50_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621150.1"
                     /translation="MLFKEQGYDEFLAEQIKAGQEAIARGETFTKEQINNELNHLFAD
                     MQKRQQLRENENLFEVNYA"
     gene            complement(6929..7519)
                     /gene="yraP"
                     /locus_tag="PXE50_000207"
     CDS             complement(6929..7519)
                     /gene="yraP"
                     /locus_tag="PXE50_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divisome-associated lipoprotein YraP"
                     /protein_id="HDL5621151.1"
                     /translation="MNKLANKLLKGSLLVLGFISLQGCITTAVVTSAAVATKVATDPR
                     TTGTQVDDEILEEKVAYNINKDEQIKQEARINVVAYNGKVLLIGQAPSMDVVENAKNL
                     AAGAEGVTEIYNEIRQGEKIGFGQITQDSWITTQVKSKLLVNSEVKATEVKVVTENGE
                     VFLMGKVSQNQADAAAEAARNVGGVTKVVKVFSYAQ"
     gene            complement(7529..8113)
                     /locus_tag="PXE50_000208"
     CDS             complement(7529..8113)
                     /locus_tag="PXE50_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HDL5621152.1"
                     /translation="MLNKIQDRFTESIQTQISASELLPAKLSEAANRIVACLLRGDKV
                     IVCGHGRSYGNAELLVSHLLHRYELARPSFAAVQLQLSGVLAGVVAQDNELEAVYKKQ
                     LQAVAKEGDLFIVFSPVGNEECILQAIHTAKNQHLDLDIIALTGSNNDHTLGLLDESD
                     IEISAPSTNQLRVIESHHFYVNLLCELIDHLLFS"
     gene            complement(8119..8490)
                     /locus_tag="PXE50_000209"
     CDS             complement(8119..8490)
                     /locus_tag="PXE50_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HDL5621153.1"
                     /translation="MELFNKLINKREQGSFYEQKARVFLEQQGLRFVAANQAFKGGEL
                     DPIMQDGQTVVFVEVRQRKSNRFGSAVESIDYRKQQKWQNAANMWLLKQNQSLETANC
                     RFDVVAFEGNQTPVWIPNFLG"
     gene            complement(8465..10186)
                     /locus_tag="PXE50_000210"
     CDS             complement(8465..10186)
                     /locus_tag="PXE50_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator"
                     /protein_id="HDL5621154.1"
                     /translation="MATILNHTMKKALVPTAIALFISACTSVNPVTESIKNEAYSSSE
                     FYINKADQTKEAEDKISYQLLAVRKLIDENKEYEAQNTFSEILTAEMNEVQKLEYALV
                     SAQLAALQGKNEQATSQLKAIQDPLLSSAQRLRYIQTQARIAANQKDVIGIVRARSQL
                     NNFYKMNRERQENNDIIWQTLRDANRGMLEKTVPEAGEMELAGWLALINIYNQNVTTP
                     AQMPQAINNWKAQYPSHSAVAVMPTELQGVSNFQQTQLNSVALLLPLSGDAKILGDII
                     KRGFNDAKADDSTAVQTFDTDSSDVNSLISQAKQQGANVIVGPLLKSRVDEMLLSPEI
                     QNVNILALNATENVRNIAQVCYYGLSPESEAQSGAEKIYQDGNSVAIVAAPQDDYGNR
                     SAEAFAKRWRQLTNSDADVRYYNQPLDAVAAIQNAGVSKAALYILGNAEQVLEIKQGI
                     DSSTLKDRLAIYTSSRSNSPNNGIDFYTSMEGVKFSEVPLLADQSSSEYKKAENLANS
                     DFSMMRLYAMGADAWSLATKFNEFRHIPGYKISGLTGELKAGQHCNIERSLSWMQYRN
                     GAIQQAY"
     gene            10260..11132
                     /gene="rsmI"
                     /locus_tag="PXE50_000211"
     CDS             10260..11132
                     /gene="rsmI"
                     /locus_tag="PXE50_000211"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HDL5621155.1"
                     /translation="MKNRQNSSGINPNYGILYIVATPIGNLGDITQRALDTLSSVDLV
                     AAEDTRHSGLLLSHYGIKKPFFALHDHNEQQKAVVLVEKLAKGENIALISDAGTPLIS
                     DPGFHLVRHCRQAGVKVVPIPGACAAVTALCASGIASDRFCFEGFLPAKTKSRCDKLT
                     ELENEPRTLIFYESTHRILDTLADMQTVFGEDRYVVMAREITKTWETIYGDQLGNLIE
                     WLNEDSNRIKGEIVLVVEGKPQSSEEAFSSQAIKLLTLLCQELPLKKAAAIVAETFGY
                     KKNALYQYGLEHFE"
     gene            complement(11377..12543)
                     /locus_tag="PXE50_000212"
     CDS             complement(11377..12543)
                     /locus_tag="PXE50_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5621156.1"
                     /translation="MTNLLLAIIYLSFISLGLPDAILGSAWPSMHQQLAVPLSYAGVV
                     SMIMSIGTITSSLMSDKLTYHLGTGKVMVISVALTALALWGFSISDAFWILCLWAIPY
                     GLGAGAVDAALNNYVAVHYASRHMSWLHCMWGVGASIGPHILGYALLQGRGWEAGYFT
                     ISMLQIGLTLMLFCSLPFWKLRKQITAEINHSAKPMSLKETLKIPGVKYGILAFFGYC
                     GVEQTAGLWASSYFVMVKDVGLEQAAAFGSIFFIGITVGRGVSGFLTLKFSNRQMIKL
                     GSALILVGIAILCLPLGKYVTLASLIIIGLGCAPIFPCLIHSTPAFFGEDKSQSVIGV
                     QMASAYIGVLLLPPIFGFIANAISIQLLPLYLLLMFAIMAYAYRNLVRETSPSP"
     gene            complement(12695..14209)
                     /gene="putP"
                     /locus_tag="PXE50_000213"
     CDS             complement(12695..14209)
                     /gene="putP"
                     /locus_tag="PXE50_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HDL5621157.1"
                     /translation="MFGLDPTTIMFVVYILGMIAIGFIAYRVTNNLSDYILGGRRLGS
                     FVTALSAGASDMSGWLLMGLPGAVYAGGLIEGWIAIGLTIGAYLNWKLVAGRLRSHTE
                     HSGDALTLPEYFHNRFGDKTRLIKILSAVIFLLFFAIYCASGVVAGARVFENLFGLPY
                     HQAIWYGAVATILYTFIGGFLAVSWTDTIQASLMVFALILTPFFVMYNLGGFDEMQAL
                     IDRAGEMAQKDYNDIFTGTSVLGIISLMAWGLGYFGQPHIVVRFMAAESVKSLENARR
                     ISMTWMIICLLGAIGIGYFGMAYFFGNPEQVGNISKNPEQIFIELAKLLFNPWVAGIL
                     LSAILAAVMSTLSAQLLICSSAITEDLYKGILRPQASDKELVWLSRLMVLAVAALAIY
                     IAQDPDSKVFGLVRNAWAGFGSAFGPVVLLSLFWKRMNGFGAIAGMLTGALIVHFWGD
                     ITLKLALPEIYSMIPGFIAATLMIIVVSLITPMPSKAVLDTFDRANKAYLAEVK"
     gene            complement(14303..15091)
                     /locus_tag="PXE50_000214"
     CDS             complement(14303..15091)
                     /locus_tag="PXE50_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HDL5621158.1"
                     /translation="MNAKKEKESSGNQSLIRGLTLLELLAKFPNGCPLAHLAELSGLN
                     KSTVHRLLQGLQQEGYVRPAPTAGSYRLTTKCLAIGQRALSSINILHIAAPHLEALNL
                     TLGETVNFAMRENDHAILINKLEATTGMMRTRAYIGQQMQLYCSGMGKLFLAYGSADY
                     IPQYWQTKSDIIQKLTVNTITTIDGMQTELETIRRQGFAMDNEENELGVSCIACPIFD
                     HQQKVHYAISVSLSTARLNQLGRENLLPAIQETAEKISAELGGR"
     gene            complement(15088..15666)
                     /locus_tag="PXE50_000215"
     CDS             complement(15088..15666)
                     /locus_tag="PXE50_000215"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HDL5621159.1"
                     /translation="MNQSSLTDLRSQLRQSMRLKRQSLTAGQQTQAAESIIPQALSLI
                     ESYQASHIAFYLPFNGEISPIPLMEQLLQQGKKLYLPLLHPFTSGQLLFVNYNCKTIL
                     KFNRLGIQEPILDVRNILPLQELEMIFTPLVACDKAGNRLGMGGGFYDRTLAQAPHLI
                     SVGLAHECQQVEQLPIESWDMPLDHIILGAAK"
     gene            complement(15668..15859)
                     /gene="ssrS"
                     /locus_tag="PXE50_000216"
     ncRNA           complement(15668..15859)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="PXE50_000216"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(15964..16254)
                     /locus_tag="PXE50_000217"
     CDS             complement(15964..16254)
                     /locus_tag="PXE50_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HDL5621160.1"
                     /translation="MSANNIELQIFGQVLRLQCPVEQQEHLLASAQRLEERVVVLKEQ
                     SGIIQLEKVLAIVALNLNYELEQAQRQNAENKNVLVACIEQLDNSLGKFQSN"
     gene            16333..16890
                     /locus_tag="PXE50_000218"
     CDS             16333..16890
                     /locus_tag="PXE50_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein"
                     /protein_id="HDL5621161.1"
                     /translation="MAITDSQQFKQLVSQLQIDDTPAEFHGFLCGLIAGGIQDESWKT
                     LTYQFTNDGHAFSIEPLNTLTDFYQQLSESFSEANTLFSLWLPQNEEDGFALADGISE
                     WTNSFLLGLGVAQPKLQQETDEVGEAIDDLDEIAKLGYSDDDNNEELLEAGEEVLEYL
                     RVLALFLHSHFALGVPKTEEKPPLH"
     gene            16988..18052
                     /gene="hemE"
                     /locus_tag="PXE50_000219"
     CDS             16988..18052
                     /gene="hemE"
                     /locus_tag="PXE50_000219"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HDL5621162.1"
                     /translation="MSELKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAG
                     DFMSLCRNADLACEVTLQPLRRYELDAAILFSDILTVPDAMGLGLSFGAGEGPKFARP
                     VASLNDVNQLPIPDPEDELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGS
                     SKAFTKIKKMLYAEPHILHKLLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHED
                     YKAFSLHYMHKIVDGLIRENEGRKVPVTLFTKGGGLWLEAIAETGCDAVGLDWTVDIA
                     DARRRIGDKVALQGNMDPSVLYASPERIEQEVKNILAGFGNGSGHVFNLGHGIHLDVP
                     VESPKVFVDAIHNYSKQYHK"
     gene            18199..18789
                     /locus_tag="PXE50_000220"
     CDS             18199..18789
                     /locus_tag="PXE50_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF416 family protein"
                     /protein_id="HDL5621163.1"
                     /translation="MRNPIHKRMERFEPWQNTTFMACLCERMYPNYQLFCEVTEQPEK
                     AKVFQNILNLVWEYLTIKGAKINFDNQLEKLEEIIPDVNEYAFFGVLPAQEACEALSE
                     LLHSIIAGSTLEQAIRISQISLGTVASYLEMQQDKELNEQELKNSEEIQEELDVQWQI
                     YRLLNECEKRDLDLIFELKDEIRSSGISNIGLNINQ"
     gene            18925..19197
                     /locus_tag="PXE50_000221"
     CDS             18925..19197
                     /locus_tag="PXE50_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005819506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HDL5621164.1"
                     /translation="MNKTELIDAIAAGANLTKKDAKAALEATLDAISASLKAGDAVQL
                     IGFGTFKVNERKARTGRNPKTGEEIKIAAAKVPAFVSGKALKDLVK"
     gene            complement(19286..19846)
                     /locus_tag="PXE50_000222"
     CDS             complement(19286..19846)
                     /locus_tag="PXE50_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621165.1"
                     /translation="MKKSFLSLLVLGTTMALAACDQAKEAAQSTTDKAVEVKEAVAEK
                     AAEVKSATEAKVEELKAAANDAAQATADKTEEAKKAVAEKATELKTTTEAKVEELKAA
                     ANDAAQATTDKTEEAKKAVAEKAAELKATTEAKVEELKAAASDATQATADKAEEAKKA
                     VAEKAAEVKVETETKVEEMKKAIESK"
     gene            complement(19992..22934)
                     /gene="rne"
                     /locus_tag="PXE50_000223"
     CDS             complement(19992..22934)
                     /gene="rne"
                     /locus_tag="PXE50_000223"
                     /EC_number="3.1.26.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E"
                     /protein_id="HDL5621166.1"
                     /translation="MKRMLINATQKEELRVALVDGQRLFDLDIESPGHEQKKSNIYKG
                     KITRVEPSLEAAFVDYGAERHGFLPLKEISREYFPSDYVFNGRPNIKDIIQEGQEVIV
                     QVSKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDERLELKEALDCLDV
                     PEDVGLIVRTAGVGKSPEELQWDLKVLLHHWEAIKKAAESRPAPFLIHQESDVIVRAI
                     RDYLRRDIGEILIDNKKVFEKAKNHIRLVRPDFINRVKLYEGEVPLFSHYQIESQIES
                     AFQREVRLPSGGSIVIDVTEALTAIDINSSRSTRGGDIEETALNTNLEAADEIARQLR
                     LRDLGGLIVIDFIDMTPVRHQREVENRIREATRQDRARIQFARISRFGLLEMSRQRLS
                     PSLSEASSHICPRCQGTGKVRDNESIALSILRLLEEEAIKENTAQVHTIVPVQIASYL
                     LNEKRKAISSIEKRHDVQIVVVPSESMETPHFSVYRLRENEITPTLSYDLTKHYEARH
                     EEEHPHHHHQEDVLVTRNEPVITVESVLQSSELNLQPSPTPTEPPKPSLLSRLIATIK
                     GWFSEEKVEEKPKPKARNQRERRQRRERPNRNAKAENQERKTPQAQTTPAEEKPMRSE
                     KKARRAVVEEVSGVTEQESRSNSREVQTERRQRRDLRKKVRIETQEVEVENLTPAVEE
                     TVAKQVENVQKNQQIQPLATQEVPVETAPEVETTNEGRENNRQRRLPRHLRVGNQRRR
                     ENQRNQVISPMPLTSAVASPELASGKVWVQVTSTVKVEEKASFLSVDQMLEQQENQLV
                     ETEKKSEEKKLHTVSPLGGFVAQATNRDLVKEKQEQLSKPKEEKVASEDVKPVEVKEH
                     IAPFGSVVAQHSERDLVKEKNERVSKFQSQATVAPAIVEEVTNPIEVPKSTYESDYRF
                     NGRLGTFSRVEHTQAAMTIASAPSDKLEVVEISQWQNSKYYFYGKGFGGYTSAVSQVQ
                     SAPRSTNG"
     gene            complement(23391..24236)
                     /locus_tag="PXE50_000224"
     CDS             complement(23391..24236)
                     /locus_tag="PXE50_000224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HDL5621167.1"
                     /translation="MMSQEQFEEINQERRQALNHGSRIAMAASVLGALGIASTANAKQ
                     ASAEKSPYAEPEQYGLKRHGMTIDPKRVALVVVDPQIDFLGPKGVMWGVLGDSIKENN
                     TVANIESLFKAAKAVDMPTFVSPHYYYPTDHKWEFGSPGEHFMHDSGMFARKGQYTME
                     GFENSGADFMPEYKPYIFDGKTVITSPHKIFGPETNDLVLQLRKRKIDQVILAGMAAN
                     LCIDSHLRELIEQGFEVTVVKDATAGPRIPEGDGYLAALTNYRIIANDLWTTEEAVKK
                     MTAKA"
     gene            24363..25187
                     /locus_tag="PXE50_000225"
     CDS             24363..25187
                     /locus_tag="PXE50_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5621168.1"
                     /translation="MDSLTHLFTQFQFRTDLFHLGQLCQIGSFNEENKGYLHFVRQGR
                     FILNQAAERPITIERPAIIFSPTNILHSLHPLDDSGLDIFCINFDFGKGIRNPLTHTL
                     HNIVILELAQYPELGVLADQIFSEVNQKGCGYQAMIHHLCAYFTLKVARQCLEKGYIQ
                     TGLLKGLADKQLGKVLLAIHNAPERDWNVEELANVALMSRSRFAAYFKQTMGVSPMDY
                     LTNWRLAVAQHLLQKGIPVALVAEQVGYSHNAALSRVFMRELGLSPTEWLAQNKES"
     gene            complement(25272..26735)
                     /gene="ubiD"
                     /locus_tag="PXE50_000226"
     CDS             complement(25272..26735)
                     /gene="ubiD"
                     /locus_tag="PXE50_000226"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HDL5621169.1"
                     /translation="MKYKNLREFLDFLESQGELVRIQQEIDPYLEMTEIADRTLRKGG
                     PALLFENPKGYQMSVLCNLFGTPKRVALGMGQEDTKALRELGKLLAFLKEPEPPKGFK
                     DLIGQLPQWKQILNMPPKVLSKADCQQVVISGDEVDLYKLPIMHCWPGDVAPLVTWGL
                     TITQGPYKKRQNLGIYRQQLIGKNKLIMRWLSHRGGALDFQEWKAENPGKPFLVSVAI
                     GADPATILAAVTPVPDTLSEYAFAGLLRGHKTEVVKSISNELEVPASSEIVLEGYIDL
                     EETALEGPYGDHTGYYNEQEYFPVFTVTHITMRKDAIYHSTYTGRPPDEPAVLGEALN
                     EVFIPILQKQFPEIVDFYLPPEGCSYRLAVVTMKKQYAGHAKRVMMGVWSFLRQFMYT
                     KFVIVCDDDVNARDWKDVIWAITTRCDPARDTTLIEHTPIDYLDFASPIAGLGSKMGI
                     DATNKWAGETTREWGTPIEKDDNVVKRIDEIWDSLGI"
     gene            26872..27846
                     /gene="znuA"
                     /locus_tag="PXE50_000227"
     CDS             26872..27846
                     /gene="znuA"
                     /locus_tag="PXE50_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein
                     ZnuA"
                     /protein_id="HDL5621170.1"
                     /translation="MFKRTLIGLAVLGASVAQADVLTSIKPLGFIASAITEGVTETKV
                     LLPVTASPHDYSLKPSDVTQLQSAQLVVWVGDGLEGFLEKSIEKLPREKVLTLEDVDA
                     IDDIVDKASKKEDKDDDHDHKHEHKHEHKHEHKHEGHNHEGHNHDHHGHSHDEDWHIW
                     LSSEASELAAEQIAARLSEQMPEHKAKIAENLAKFKANLTAKKAEIAKQLEPVKAKGY
                     YTFHDAYGYFEREYGLNSLGSFTINPTVAPGAKTLTAIKKNIAKNKAQCLFAEPQFTP
                     KVIETLAKETKVNVGQLDPLGAKVQLSATAYPEFLQVLADEFSQCLTK"
     gene            complement(27898..28218)
                     /locus_tag="PXE50_000228"
     CDS             complement(27898..28218)
                     /locus_tag="PXE50_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005621693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhnA domain-containing protein"
                     /protein_id="HDL5621171.1"
                     /translation="MIYPTCPECKSENTYHDSIQFVCPDCAYEWTGEETDQDDDVLIV
                     KDSNGNLLSDGDDVLLIKDLKLKGSSEVLKKGTKFKGIRLAQGDHNVDCGKIMLKSEF
                     LKKA"
     gene            28359..30722
                     /gene="rnr"
                     /locus_tag="PXE50_000229"
     CDS             28359..30722
                     /gene="rnr"
                     /locus_tag="PXE50_000229"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HDL5621172.1"
                     /translation="MIVDPNYQQELEKYENPVPSREFILNTIREHNAPMSRDELLSAF
                     HIDDEERMEGIRRRLRAMENDGELVFTKGKRYALPEKMDLIKGTVIGHRDGYGFLQVE
                     GHEKGATKSEDWFIPNAQMVKVMHGDFVLAQPNGTDRRGRKEVRIVRVLEARKKQIVG
                     RFFLESGIGFVVPDDSRVNQDILIPDEHRMGARMGQVVVVELQERKASFSRPVGIITE
                     ILGDNLAPGMEIEIALRNHDIPHIWPEGVEKQIRQFSSEEVPEEAKQGRVDLRDLPLI
                     TIDGEDARDFDDAVFAKKEGNGWRLWVAIADVSYYVRPKTALDLEALNRGNSVYFPNR
                     VVPMLPEVLSNGLCSLNPQVDRLCLVAEMSVSSKGELQDYQFYEAVMNSHARLTYTKV
                     WKMLEGDEALRERYAPLVPHIEELYAMFQTLMKARHKRGAIEFETIENQFIFNPQGRI
                     ERIEPLIRNDAHKLIEECMILANIAAARFVEKANEPALYRIHDKPSEEKLLSFKSFVR
                     ECGLTWDVGLDPTPKDYGVLLEQIAERADKELIQTMLLRSLKQAVYAADNIGHFGLAL
                     TEYAHFTSPIRRYPDLLLHRAIKYLIEKGKGNTRYYTDGGGYHYKLDDMDEFGDKCSA
                     TERRADEATREVADWLKCEFMQDHLGEEFDGVISSVTGFGLFVKLNELLIDGLVHIST
                     LDNDYYHYDADRQRLIGGSGIIYRLGDAVRVKVINVNLDEKKIDFELLTGNKKTGKTA
                     KKKAKATEVPVFKEPKTVKKAKKVAEKKPAKSAKKRTKTTASKSRKK"
     gene            30726..30992
                     /locus_tag="PXE50_000230"
     CDS             30726..30992
                     /locus_tag="PXE50_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621173.1"
                     /translation="MDYKKQILFSLLFALVIAIISYFLFTYIPFDCSDLSKLNDSQRL
                     ECRTAEFLGVYYWLPHTTTLFFGSVLLYWAVYGMISLVQAVLKR"
     gene            31215..31673
                     /gene="mraZ"
                     /locus_tag="PXE50_000231"
     CDS             31215..31673
                     /gene="mraZ"
                     /locus_tag="PXE50_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HDL5621174.1"
                     /translation="MFRGASSISIDSKGRIAIPTRYRAELLEKHHGILVCTVDIRQPC
                     LLLYPLHEWEMVEQKLLALSNFDPVQRRIQRVMQGFATECEMDSAGRILLSPTLRQHA
                     QLEQQIMLVGQLNKFEIWQDKQWQAQIAEDLAFGSSAEILDCEALKNLSL"
     gene            31689..32627
                     /gene="rsmH"
                     /locus_tag="PXE50_000232"
     CDS             31689..32627
                     /gene="rsmH"
                     /locus_tag="PXE50_000232"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HDL5621175.1"
                     /translation="MSENPKHITVLLHEAVDGLAIKPNGIYIDGTFGRGGHSRLILSK
                     LGENGRLIATDRDPRAIAEAQTISDPRFQIEHTAFSAIPELCERMGLVGKIDGILLDL
                     GVSSPQLDEAERGFSFMRDGPLDMRMDTTKGLSAAEWLAQVSAEDLAWVLKEFGEERF
                     AKRIAQAVVSYNKSANEKISRTLQLAQIIADAVPFKDKHKHPATRSFQAIRIFINGEL
                     DELEKALNSALTVLAPEGRLSIISFHSLEDRMVKQFVRKHSKGMDVPRGLPILEAELT
                     KNIPLKTIGKAIMPSEAEIEANARSRSAVLRIAEKR"
     gene            32646..32957
                     /gene="ftsL"
                     /locus_tag="PXE50_000233"
     CDS             32646..32957
                     /gene="ftsL"
                     /locus_tag="PXE50_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HDL5621176.1"
                     /translation="MSNERYPLHQIIIDDIFSHNKVALLLLIGVVISAVATIWITHQT
                     RLSVSEQGQLIQANQKLESQYTNLQLEENSRSSRARVDAAAKSFGLQPIKKEQEIILV
                     E"
     gene            32961..35021
                     /locus_tag="PXE50_000234"
     CDS             32961..35021
                     /locus_tag="PXE50_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsI"
                     /protein_id="HDL5621177.1"
                     /translation="MVKSVKLKRKQEAPVAKAEPQQAEGKKTPSFLPTRFRVVVFFML
                     LMVGGLLAQTAYIQLFDSERLIKEANNRSLRTKELQFTRGRILDRNGRFLSISVPMYS
                     LTLDPREYFDTKLRRSNESWRALAIEMETSKGKIEANVNKFIEKKNFSKEKVDFDPRS
                     ILNTKSEGYWTQLAQVTGLDYNSLIEKVRNNPSSVFLRLDNENLVRERQKFQALSKEI
                     GRSYNDIMDELYSKNRQRFLYLSRHQSEAISEYAKELDIDALVIKVESRRFYPLAEES
                     SQLIGFTDKDDMHGSEGLERSFDSLLIGKNGKQIIRKDAKGNIVENIRSEKQYDPQDV
                     MLSIDEELQSMVYGEIKKAVQENNAESGTAVLVDVQTGEILAMANAPSFNPNKRDSFK
                     PELMRNRAITDTFEPGSTVKPFTVLTALQNGVTYRDEVIGTRPFVVNGHTIKDVAPRD
                     SLTLTGILQKSSNIGVSKLALRMPANALVDTYTKVGFGKDTGLGLGEQRGTNGDRKRW
                     ADIERATLSYGYGLNVTPLQLARAYATLGSFGLYRPLSITKVDPPVIGERVLPEKTTR
                     DVVHMMESVAAKGEGGHRAAVDGYRVAIKTGTARKLEKGKYVEKYIAYTAGLAPASDP
                     RFALVVLINEPKAGNYYGGFVSAPLFSRIMGYTLKQRNIKPDNLTENTQSAVREIKLE
                     RPIN"
     gene            35030..36520
                     /gene="murE"
                     /locus_tag="PXE50_000235"
     CDS             35030..36520
                     /gene="murE"
                     /locus_tag="PXE50_000235"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HDL5621178.1"
                     /translation="MKRLLPFLTELDAWVEELTELKQMTLDSRQVQAGDLFVALKGHQ
                     VDGRKFIPNAIEQGAAIILAEADEDQPEIELDPKFAKFNLDRTACCKVVSVPRLPKLL
                     SEIAGALYHNPSHKLTLAGITGTNGKTTTAQLLAQWHNLLGGKSAVMGTIGNGLYGQV
                     QEAVNTTGSAIEIQHNLANFVELGADFCAMEVSSHGLAQFRAEALDFDLAIFTNLSRD
                     HLDYHNTMEEYAQAKFRLFNELSTKAQVINADDEIGREWLTQLPNAVAVSTDPKFAGN
                     HQFVKATAVKFTLQGASIAFESSWGNGELHSRLIGAFNVNNLLTAFAGLLALGFDIQE
                     LVKTAPNLVGVAGRMECITAPNKPMVIVDYAHTPDALEKALQAARLHCEGELWCIFGC
                     GGDRDAGKRPLMATIAEKLTDKVIATDDNPRTEDNQKIMADIVKGFSKPQQIIHNREE
                     AIKTAIEQAKATDVILIAGKGHEDYQIIGTEKLHFSDQETARKYLF"
     gene            36608..38002
                     /gene="murF"
                     /locus_tag="PXE50_000236"
     CDS             36608..38002
                     /gene="murF"
                     /locus_tag="PXE50_000236"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HDL5621179.1"
                     /translation="MIKLTTQQIAEILNAKLIGNGETVVETTSTDTRQAVENGLFFAL
                     KGENFDAHHYLQNAVAQGCVAVVVERECEIDVPQLVVADTRLALGELAKWLKAKLNPK
                     TVAMTGSSGKTTVKEMTAKILQKMTACEQEVLYTFGNLNNDLGVPMTLLRLTEQHKYA
                     VIELGANHIGEIAYTTAIAQPDACLVNNVAAAHLEGFGSLAGVAQAKGEIYRGLKENG
                     KAIVNLAFYYPQWQKEIGSREMQSFSYIGSDSDSYADYWAEDVELHLSGSRFTLHTPQ
                     GEIAIDLPYLGKHNVSNALAATSLAMSVGATLEAVKAGLEQRSMVKGRLYPVQINDHC
                     LFIDDTYNANVDSMKSAISVLENYPAYRIFAVGDMAELGEESSKCHQEVADFAKNAAL
                     DLIVSFGKESAVISQQAEHHFTDKQQMVDFLLPIILQKIEQKQPLVLLAKGSRSQKME
                     TVISELCKPFNLNF"
     gene            38023..39105
                     /gene="mraY"
                     /locus_tag="PXE50_000237"
     CDS             38023..39105
                     /gene="mraY"
                     /locus_tag="PXE50_000237"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HDL5621180.1"
                     /translation="MLVWLAELLVQYNTAFNVVSYITFRAIMALLTAMGIGLWIGPKV
                     IRRLQILKFGQEVRNDGPESHFKKRGTPTMGGVMILAAIGVSTLLWADLRNSYVWFTL
                     FVLFGYGAVGFVDDYRKISRKNTDGLIARWKYFWLSAIALVAVFGMYAVGKDTAATQL
                     VVPFFKDVMPQLGLFYIVLSYFVIVGTSNAVNLTDGLDGLAIVPTIMVASAFALIAWA
                     TGNFNFAQYLHIPFIPNAGELVILCTAIVGAGLGFLWYNTYPAQVFMGDVGSLSLGGA
                     LGVIAVLVRQELLLVVMGGVFVVEALSVILQVGSYKLRQKRIFRMAPIHHHFELKGWS
                     EPRVIVRFWIITLMLVLVGLVTLKLR"
     gene            39169..40470
                     /gene="murD"
                     /locus_tag="PXE50_000238"
     CDS             39169..40470
                     /gene="murD"
                     /locus_tag="PXE50_000238"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HDL5621181.1"
                     /translation="MQKQYENKTVTIIGLGTTGLSCVDFFKKKNANIQVIDTRANPAG
                     ADKLDVTIPLHTGGLNSEWLLKSDLIVISPGLAVATPEIQQAIQAGVEIVGDVELFCR
                     EAKAPIIAITGSNGKSTVTTLTTEMAKQAGIKVGMGGNIGVPVLSLLEGDYDLFVLEL
                     SSFQLETTYSLKAKAATVLNISEDHMDRYDSIADYRQAKLRIYDNAENIIVNGEDAQT
                     YPIQAVKKVIRFAEQNAEYSLRNQMLYSGDDAIIQTKQMLISGRHNEMNALAAMALAE
                     AANVPREGIVKALQIYGGLPHRFQAVATNDGVRWVNDSKATNVGSTVAALNGLNIAGT
                     LYLLLGGDGKAADFSELKPLINKPNIVCYCFGQDGAALAELSEQSVLVETMQQAIEAI
                     RPQLKKGDMVLLSPACASLDQFKNFEQRGEVFMALAQGQHA"
     gene            40470..41648
                     /gene="ftsW"
                     /locus_tag="PXE50_000239"
     CDS             40470..41648
                     /gene="ftsW"
                     /locus_tag="PXE50_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HDL5621182.1"
                     /translation="MLERIKSEWDKWVRLTPSNSLYDRTLIWLFLGLLIIGFVMVTSA
                     SLPVSTRLNNDPFYFAIRDGLYIIASIIFCYVFVQIPIEKWEKHNLALFFISIGFLIA
                     VLIFGRSINGAVRWIPLGILNFQPAELAKLAVICYFASFYVRKYDEIRKEKASFWRPA
                     VILFLFGFLLILQPDLGSTFVLFVLTFSMLFIVGAKIMQFMFLGVVGTVLFAVLILTS
                     EYRLKRVTSFMDPFADAYGDGFQLSNSQMAFGQGEFWGQGLGNSVQKLEYLPEAHTDF
                     VMAVIGEEFGFFGIACIVLLLILLTVRALKISKESLVLEERFKGYMAFGIAIWVFLQG
                     FVNLGVASGLLPTKGLTFPLVSYGGSSLVIMSIAIAVLLRIDHENRAERIGHAKIKTI
                     "
     gene            41767..42822
                     /gene="murG"
                     /locus_tag="PXE50_000240"
     CDS             41767..42822
                     /gene="murG"
                     /locus_tag="PXE50_000240"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HDL5621183.1"
                     /translation="MAKKLLVMAGGTGGHVFPAIAVARELQKQGWQIRWLGTKDRMEA
                     TLVPKHGIEIDFIEISGLRGKGVAALLKAPFAIFKAVMQARKIIKNYQPDAVLGMGGY
                     VSGPGGIAAKLCGVPVILHEQNAVAGLTNVWLSKIARKVLQAFPTAFKEAEVVGNPVR
                     EDLSALPLPNERFAKRGYPINILVMGGSQGARVINQTVPEVAKVLGNNVFISHQVGKG
                     NLAGIEEVYQQTGNGIASEFIDDMKAAYEWADLVICRSGALTVCEIAAVGLPAVFVPF
                     QHKDRQQFLNANYLAADGAAVIIEQSDFTPKALQQALEPLIANRQLLLDMSMRARAKS
                     TPMAAKRVAEVIIQEAN"
     gene            42898..44325
                     /gene="murC"
                     /locus_tag="PXE50_000241"
     CDS             42898..44325
                     /gene="murC"
                     /locus_tag="PXE50_000241"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013527829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HDL5621184.1"
                     /translation="MKNFQDKVKKLVPEMRRVSQIHFIGIGGAGMSGIAEVLLNEGYQ
                     ISGSDIADRAVTQRLSAAGAKVFIGHQAENIAGASVVVVSTAIDETNPEIIAAREARI
                     PVIRRAEMLAEIMRFRHGIAIAGTHGKTTTTAMISMIYTEAKLDPTFVNGGLVKSTGK
                     NAHLGASRYLIAEADESDASFLHLQPMVSVVTNIEPDHMDTYGGDFEKMKETYVRFLR
                     NLPFYGLAVMCADDETVMEIAPRVGRQVITYGFSENADYRIEDYQQTGFQEHYTVVCP
                     SGERIDVLLNVPGMHNALNATAALAVAKEEGIGNEAILAALADFQGAGRRFDQLGSFI
                     RPNGKIMLVDDYGHHPTEVDVTIQAARSGWEGKRVVMIFQPHRYSRTRDLFDEFVQVL
                     SKVDALILLDVYAAGEAPIVGADSKALARSIRNLGKVDPILVSDTDQLGEVLDQIIQD
                     GDLILAQGAGSVSRISRGLAESWKN"
     gene            44415..45326
                     /locus_tag="PXE50_000242"
     CDS             44415..45326
                     /locus_tag="PXE50_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HDL5621185.1"
                     /translation="MSIKNEKIAVLFGGVSQEREVSLNSGAAVTAALKSLGYNVEGID
                     TKEFPIEKLKEKGIQRVFNILHGGIGENGVLQGALEQMGIPYTGCGVMASAVTLDKFR
                     TKLLWNAVGLPTADMVVVQRGQAVDFDQIIAKLGLPVFVKSSCEGSSVGVFKVKTKEE
                     LAPAIHEALKFDSIVLVEEFLAGNEYSVPVLDGQVLPAVQVIPDGEFYDYHAKYVSDN
                     TQYVVPALNDERQAEVAKLVKAAYDVVGCRGWSRIDVMEDGEGKFRLVEVNTNPGMTS
                     HSIFPKSAATVGISFEKLVERVLELSA"
     gene            45326..46117
                     /locus_tag="PXE50_000243"
     CDS             45326..46117
                     /locus_tag="PXE50_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HDL5621186.1"
                     /translation="MGIFRKKNSTNVRLNVLNPKTPVSPRKWLVFIKPLIVLLCTLFV
                     FGVYSNWQNILESWDKTPIRAYALTHKTQFTTNADIRETLSKEPALKGYFGQNIQEVK
                     DKLLSIPWVKDVAVRKLYPDRLSITLLEHKPVAIWNDTNFVSEQGTVFSLPKDRIDKN
                     GLPLLYGPDTEGKSVLEAWNKIRADLNARNLDLTSVSVDNRGSWTIRLSNQVELRLGR
                     GEWTSKIDRFVTIFPEIHIPEGNRLAYVDLRYPHGAAVGFSPIKN"
     gene            46140..47411
                     /gene="ftsA"
                     /locus_tag="PXE50_000244"
     CDS             46140..47411
                     /gene="ftsA"
                     /locus_tag="PXE50_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HDL5621187.1"
                     /translation="MTKAVESKIIVGLDIGTSKVVAVVGEVLPDGVINVMGAGVCPSK
                     GVDRGGVIDLDAAVNSIQRAIEQAESIADCQIMGVTLAISGQHIVGLNEAGSSTLSGG
                     IVTQDNIESAVDMAKAIKLQDGLETLHMIPQEYHVDRLPATKNPIGLSGMRLQVQAHL
                     IACHQAWLKNLKNAVEHAKLKVDQVVFSGLASSYSVLTEDEKELGVCLIDIGGGTMDV
                     LVYTDGALRYSKVIPFAGNNITDYLARVFTTSRPEAESLKVGYGSAISPPTHNSDKKI
                     EVAGLGGRMARTFTRAQVATVTSQCYNDLLKVVEEELTQLRHELFQKGIKQELIAGVV
                     ITGGGSQIEDIVECAKSIFGSQVRVGYPLNITGLTDYVNKPQYATALGLLQYSHYNYT
                     EQGTSTDSNEDIFAPIGRGTKKIIDFFKSKF"
     gene            47444..48691
                     /gene="ftsZ"
                     /locus_tag="PXE50_000245"
     CDS             47444..48691
                     /gene="ftsZ"
                     /locus_tag="PXE50_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HDL5621188.1"
                     /translation="MFEPIIEQTQDAIIKVVGVGGGGGNAVDRMSRSADDIKGVEFFD
                     VNTDAQVLRKRTTRQTIQIGASTTKGLGAGADPMVGKQAAEEDREAIANALKGANMTF
                     IAVGMGGGTGTGAAPVVAQIAKEQGSLTVGVVTKPFRFEGPRRMRFADQGIKELSQYV
                     DSLIIIPNDKLRGLGKQTTAVDAFAAANDVLSNCVLGITNMITSSGGSTGADINVDFA
                     DVRTVMSGKGHAMIGTGFAEGEVGEGRAEKAMNDAISSPLLENVDISGASGMLINISA
                     GTDFLLEEVYAMMDLIYGFATEDAAIVFGCNYYPEMDGKVSVTLVATGIGQPEEALHM
                     PHKAQPVYAQQGNHVQATQPTQPNHAVQQPNFTQPSSYGQPNQFSGQPQPLQQPVAPK
                     PQSVDTAQIFNPNSIPGFMRNSQ"
     gene            48723..49643
                     /gene="lpxC"
                     /locus_tag="PXE50_000246"
     CDS             48723..49643
                     /gene="lpxC"
                     /locus_tag="PXE50_000246"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012073651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HDL5621189.1"
                     /translation="MTKQRTLKQAAKVTGIGLHSGKKVTLTLRPAPANTGVIYARTDL
                     EPVVYFPASADSIRDTQLCTCMVNDDGVRISTVEHLNAAMSALGLDNVIVEVDAPEIP
                     IMDGSSSPFIYLLLDAGIEEQDAPKKFIRIKETVRVEEGDKWAELKPYNKGFKLNFTI
                     DFEHPLIPKNVGSYSIDFSAENFIQQLSRARTFTFMKDVEYLQSIGLALGGSLDNAIV
                     LDDYRILNEDGLRFKDELVRHKMLDSIGDLYMCGYNILGEFSAYKSGHGVNNKLLRAV
                     LENKNAWEFVTFEDKAEVPQGYQVQQEIFI"
     gene            49816..51498
                     /gene="recN"
                     /locus_tag="PXE50_000247"
     CDS             49816..51498
                     /gene="recN"
                     /locus_tag="PXE50_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HDL5621190.1"
                     /translation="MLTQLTINNFAIVRHLILELNEGMSVITGETGAGKSIAIDALGL
                     CLGYRSESGMIRNGSDKADISATFTMQPHSPAYLWLQEHELLDEDNPQECILRRMINI
                     DGRSKAFVNNRSLPVSQLRELGQYLIHLNGQHAPQLLLKNEYQLEIVDHYATLQPLLM
                     KMAKQYGNWKELNKQVKNFQKQCQENEARKQLLEYQVEELDEFAIKANEFEEMEEKYN
                     ILSSSEELTELSDEITRLLSDDEINANSLIYKALRNAENLAEVDSQYQGILDMLNEAL
                     IQIQEASSEVAQLASKIEQDPELLQELDNRIAQTISLARKHHIQPNELWQYHATLKAE
                     LQELLDFEDNEEQLIQNEKQAYQECITLAEEIYQKRLDATHKLSEQVTKQIKHLAMEN
                     GEFFIHIEHNLEKMSANGADYVEFNLRSNLGQQPQPLAKIASGGELSRISLAVQVLTA
                     NKLSTPTIIFDEVDVGISGSAATTVGKLLRKLGEKCQVLCVTHLPQVASYGNQQFNVQ
                     KYVENNQTETQMTLLTEAERIHALARLLGGSEITETVLANAKEMLNLAKNNE"
     gene            complement(51545..51620)
                     /locus_tag="PXE50_000248"
     tRNA            complement(51545..51620)
                     /locus_tag="PXE50_000248"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(51585..51587),aa:Ala,seq:ggc)
     gene            complement(51700..53139)
                     /gene="gltX"
                     /locus_tag="PXE50_000249"
     CDS             complement(51700..53139)
                     /gene="gltX"
                     /locus_tag="PXE50_000249"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007526628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HDL5621191.1"
                     /translation="MKIETLFPLDPNVKVRTRFAPSPTGYLHVGGARTALYSWLYAKH
                     NDGEFVLRIEDTDLERSTPEATAAILEGMEWLDLAWEHGPYFQTKRFDRYNQVIDQML
                     EAGTAYRCYCSKERLDEVRAEQEANKEKAKYDQHCLHNPQNDPSQPHVVRFKNPTEGS
                     VVFDDAVRGRIEIANSELDDLIIRRTDGSPTYNFCVVVDDWDMGITHVVRGEDHINNT
                     PRQINILKALGAPIPTYAHVSMINGDDGQKLSKRHGAVSVMQYRDDGYLPEALINYLV
                     RLGWGHGDQEIFSRDEMIELFDIHSVSKSASAFNTEKLQWLNQHYIRSLAPSYVAKHL
                     EWHMQTQGIDFTSGPKLEEIIPVLGERCKTLKELAESSRYFYQEFKAYDEKAAAKNFK
                     AEAVAPLAKLLEKLTACNDWTVENIHEAMNQTAAELEIGMGKVGMPFRLAVTGSGQSP
                     SMDITAKLVGKERTLARLQKAIEFIQANS"
BASE COUNT        15631 a        10964 c        11561 g        15155 t
ORIGIN      
        1 gagatagact cttttttcat ttgaatgttc ataaaagtat aaaaatgatt tgcttaaaaa
       61 atgaataagt ggtgtaatgg ctcaagctgt tcgtgcgtta attaaagttg aatcttgtta
      121 gttattttcc tcaaggcaag tgattgatag atacgtctgt aatatcccgt ttagctatct
      181 tttatcactt tttgtattta tataaggaaa attttatgtc agcaattacc ggcacagtaa
      241 aatggttcaa cgccaccaaa ggttttggtt ttatcacccc tgatcaaggt ggcaaagatg
      301 tattcgtaca cttctctgct atcgaagcaa acggcggcta ccgcacatta gaagacggtg
      361 ctaaagtaca atttgaaatc caagattcag agcgtggagc ttcagccgta aacgtgaaaa
      421 caatctaatt tcagcaaatt caatgaattt cgataaaaat gccgacaact tgtcggcatt
      481 tttgctatca attaatctgt acttcaaacc ttttcggcac aataaaaatg gcaggtaggg
      541 taaaaattgc catcaaccaa aatgtcaggc ttggggaatg ttgatagacc attccggcaa
      601 taaaggtaaa tactgccata aaagcacagc ttgccaagcc aaaatagaga ccttgtaatt
      661 tcgtcacacg ctctgccgat tgcatcgaaa tatagcgaat catcgcaata tgagccgccc
      721 cgaaggtaat agaatgtagc atttgcatta caataatcag cacgatctct gtagtactac
      781 ccattattgc ccaacgaatc actgcaaaaa cggcagctaa aatcattaaa tggctgattt
      841 tccacgattt aaacaagcgt ttagagacca aaaagaacaa aatttccgcc accaccgcca
      901 agccccaaaa caggctagtc attgcggttg aaatactggc atttgaccaa tgaatggtgc
      961 tgtaagtgta ataagcggcg tgcgaggctg aaattaacga caccgcgatc aacattttta
     1021 aggtttccgg ctctttcaat aattggcgat aagttacgct tgaagtattg gctttattac
     1081 cttgttcttc aaacccgact ttgggcgtag caagctgccc tattcctaaa aaaaccaaga
     1141 aaccgatgat aatccacacc accgaatttt caccaagcaa gccgataaga tagccggcag
     1201 aaagtgagcc taccacaaac gccattgagc cgaataacct tgctctgccg taatccagcc
     1261 cgatctgatg ttgccaaatt gaggcaatgc tatcggctat cggcattgcc cccgaattga
     1321 acatttgaaa caacattaac accggaaaaa gtagccaaat gaaatcccct gaaaacagca
     1381 acgccgccgc agccgcaata ttcagccaag ttaaactgcg ggcggtggga atgagttggc
     1441 tcacggtttt tacccgttgt gaggcaagca tactgccggc aaagcggaac aaatagccaa
     1501 cggcggcaaa taagccgatc atttcagtcg aatagccgtg atgtttaagc cacactggca
     1561 aaaacggcaa caacacgcca taggcacaaa aaaagccaaa gtaattaaat gccgcccatt
     1621 ggaacgggga aactttcatc ataacgattg ctccatttct ctggctcgat gaattgccgc
     1681 ccacattgca tcatcaacgg ttttagcaag atcgtgctgc tcaaacacct caagggcttt
     1741 cgccgttgtg cctccctttg aggtcacatt ttcccgcaag gtcgaaagtg gcgtagtcgg
     1801 gttcgcttcc accaatttcg ccgcccccaa tgcgacagat tgtacaagcg ttcttgcgtc
     1861 ctgctcggaa aagcccattt gcaccgcact ttgctgcatt gcctccataa aacggaagaa
     1921 atacgccggg cttgagccgg ttatcgcaat aatgtggttg atttgctcct cggtttccac
     1981 ccagtaacat ttaccaacgg ctgacatcaa ctgttcggca aattggcaag cggtcggatt
     2041 taccgatttt tttgcaaata atccggtcat tccttcgctg attaaagacg gggtgtttgg
     2101 catcgtgcga atgatatttt tcgcactcgg caacagcgtt tccaagcgtt gcacagaaat
     2161 acctgctgct actgaaatca cccatttgtt ggaaaaatca acatcggcaa actcggcaca
     2221 cacttgtgcc atcatctgtg gttttaccgc cagcacgatc acgtcagcct gctctaccgc
     2281 ctcacgattt gcaaaatttg tcgcaattcc gaccgcttgt aactcctctc ggcgagccaa
     2341 attactttta ttgcacgcaa tgatttgttc ggcagaataa ccgcttttta ataagccttg
     2401 aataatcgca tacgccatat ttccggtgcc gataaaggca agttttttct cgttcattcg
     2461 caaattctct actgtgttgg gttgaggtct gttaaaataa cactattcta cacccgataa
     2521 aggatatgca aaaatggttt ggttcaaaaa tgtgatgatc tataaattaa ccggcgagct
     2581 ggcgttggaa agcaatagcc ttaacgagtt acagcaagaa acccgcttta ccccttgcag
     2641 ccagcacgat atgagcaaat tcggctgggc tacgccactt accggctcgg atttactgca
     2701 tttctcacaa gcgaaccaat ttttgctgat ttcacacaaa gaagataaat tattacctgc
     2761 caatgtggtg aaagccgaaa ccgagcaacg cattgcagaa ctggaagaaa aagaggctcg
     2821 taagctgaaa aaaaccgaaa aacaagccgt gaaagatcag gtcgtttctg cgttattgcc
     2881 tcgagcattc agcaaacatc aattcaccgc tctttggttg gatttagata atcagttggt
     2941 ttatgtggat gcagcctcga gcaaacgggc ggaagatacg ctggcgttac tgcgaaaaac
     3001 acttggctcg ttgccggttg tgccgatttc ctttacccta ccgccggcag aggtaatgac
     3061 gaattggatc gccaaagggc atacgccaag ttggttgaat ttgttggaag aggcagaact
     3121 gaaatctttc gataccgaca gcattattcg ctgtaaacgc caagatttag agacggaaga
     3181 aatcgcccgg cacttgcaag cgggcaaatt tatcacaaaa cttgcgattg aatgggaagg
     3241 gcatttcaat tgcgtgttaa atgaagacgc cacgctttca cgcctgaagt ttgccgatga
     3301 agtgcgagag aaaaatgacg atattctcaa agaagatgtg gctcaacgct ttgatgccga
     3361 tttcttatta atgaccgaag agctgaaact tttcaccgaa aaaatgattg ccgaatttgg
     3421 cggaattaaa tccagaattt agaaaaaaat ttaaggaaag caatgttaga tcaaaccatt
     3481 atcgaccaat atgacgcctt gatttttgat atggacggca cattaattga cacgatgcca
     3541 agccacgcca aggcgtggga aaaggtgggc gaagtgttag gctacccaat caatccaaag
     3601 ccaatgtacg aactgagtgg ctcaaccact tttgtgattg cccgagaaat aatgcaacgc
     3661 tccaatatcc ccgagcatta ttttgagcaa gtggtacaac taaaacggga atttgggatt
     3721 gaaatggtgt tagccaatgc cactctgttg cctgcctttg agattattaa agctaacgtt
     3781 ggcaaaaaac caatggcaat cggcacaggc tcacaccgtg caatggtgga attattagac
     3841 caaaaattta acttacgtca atatgtttcg gttattgtag attctgatga tgtaagcaac
     3901 cataagccag cccctgaaac ctttttaaaa tgtgcggaaa aacttggcat tgccccacac
     3961 cgctgtttgg tgtttgaaga tgccgattta ggcgtgcaag ccgccctcaa cggcaatatg
     4021 aacgtgtttg atgtacgtac gaatacgata actcactcaa cccgttaaaa atgataggtt
     4081 tatatgaaaa cagaatggat taaacattta attcaacaat taaccacgct ttccaaagcc
     4141 atcgaaaact actttaccag cggttcattt ggggtgaaat tctacccttt tctaatgcac
     4201 ccttgttttc gtaaaagctg tgcctttttg atttttatta ttgctatggt ttcaagtttt
     4261 agcgggctat tttatttggt ggcggaacac atcacgattt tatttagcga aagatcgctc
     4321 accacttact tccaccatag cacccttgaa ttgatgattc cagtcggcac aatgatagat
     4381 gaaaaaatca gcgaattatc accactttcg gtggtaatgc gttcaatgtt tgtgctacaa
     4441 gcagtcgttt ttttctttat ttatgcaatc ggcatcaccc acattgctca caacaaattg
     4501 cgggtcatcg gcttattgct ttcgctatgc tttgcgattg gctgctcact agttgccggt
     4561 attcagccaa gcagtcgtgg cgaattcggc atttacaatt taggggcaag cattacgttt
     4621 ttaatcggca atttaacgct gatcatcgca ggcttcgatc tctaccaccc ttcaatgcaa
     4681 ttttttaaac gctttagcat tggtgcgggc gttatcgggg caatctgtat tttaatcacg
     4741 attttcctac caaccctgtt tagcccgtta attgaacgag caggtattta taccattatg
     4801 ctgtgggaaa ttttagccgg ttttgccatc attaaacgcc tgttgaaatt gccctcattc
     4861 agacaacaag gataaccaat gaaacagatt ccctttattc aacgctatgc tcaactgatt
     4921 gagctaccga ccatttccag ccttgttgcc gaagaagatt tatcgaaccg ccgtttgatt
     4981 gaattgctcg ccacttggct ggcagatttc ggctttaaaa ccgagatttt agcggtagaa
     5041 ggcagccgta ataaatacaa tttacttgcg acctatggcg agggtgaggg cggcttatta
     5101 ttggcagggc ataccgacac cgtgccgttt gatgaaggaa aatggcgctt caatccattc
     5161 caattaaccg aaaaagcagg caaactctac ggcttaggca cggcagatat gaaaggcttt
     5221 ttcgcctttg tggtggaggt tgtgagccaa ctcgacctaa cccaaatcaa aaagccgatt
     5281 cgcattcttg ccaccgctga tgaagaaacc acaatgctgg gggcaagaac ctttgctcag
     5341 cacagccaca ttcgccccga ttgtgcgatt attggcgagc cgacctcgct caaaccgatt
     5401 cgagcccaca aagggcatat tggcgaatcg gttcgcatta ccggcagaag cggacactcc
     5461 agcgaccccg ccaaaggcat taatgcgatt gaattaatgc accaatctat cggttattta
     5521 atgaaaatgc gtgatgaact gcgagagaaa taccacaatc cgctgttcca agtcacccac
     5581 ccgacaatga acttcggcaa tattcacggc ggcgatgcca ttaaccgcat ttgtgcctgt
     5641 tgcgaattgc aatttgatat gcgaccacta ccgaatatgg cggtgcaaga tttgtatgca
     5701 atggtaaacg agcatttaaa accgatgctg gaacaatatg gcgatttaat tgaaatccgc
     5761 catttacacg atggaattcc gggctacgaa tgcgaacact cggcacaaat cgtgcaagtg
     5821 gttgaaaagc tactgggcga aaaatgcgat gccgtcaatt actgcaccga agccccattc
     5881 attcaacaac tctgcccaac gctggtacta ggccccggct ccattgaaca agcccaccag
     5941 cccgatgagt ttttggaaat gaaatatatc gaaccgacaa aagagttatt gactaaattg
     6001 atttatcatt tttgtggata aatcaacaga aacaagcgct cattttcgcc atactttttg
     6061 caaaagaatc ggcaaaaatg accgcttgat atttagtatt gagtgaccta taaacttcca
     6121 tacttcatca ttgatttaag gagattctgt tagataggta ttaatctcta gctaggtctt
     6181 ggatacaaac ggcgagaatg aattatagta ataatatata ctttttctag gtgtatctca
     6241 tagacaatac gataattgcg gcagaatgtt tctaatgtgc catcttctct acgtcgccct
     6301 attgtaggca taaatgcaat gagatcgagt ttattttgta attgttccca aagtgaaact
     6361 gcgctcaacc aatgccctgt ataatcttct accgactgta aaatctcaat gacattagac
     6421 cttgcggtaa gtgacagctc ccaagattta ggcataatta acctcaaaca aattttcatt
     6481 ttctcgtaat tgctgacgtt tctgcatatc cgcaaataaa tgatttaatt cgttattgat
     6541 ttgttctttg gtaaaggttt ctcctcgagc tattgcttct tgaccagctt taatttgctc
     6601 tgcaagaaac tcatcatatc cttgttcttt gaatagcata ttctgctcct ttgatttgtg
     6661 tcttgattcc actatgttca agacatagtt taagtttaaa tctacgctca aagcaatgaa
     6721 gagtcaaggg aatccttatg ttgatagggt gtgcatattt ttcgagtcaa atgaattaaa
     6781 aatcatcatt acgatcaccc actcatagat tttatcttcc tatctaaggt catcttctta
     6841 tatcaaacaa gcggtctaaa tttgcaaaaa aatgacaaat ttagaccgct tgtgagttac
     6901 aaaaatataa actaattgag cttatcaatt actgcgcata actaaatact ttcaccactt
     6961 tggttactcc acctacattg cgagcggctt cggcggcggc atcagcttgg ttttggctga
     7021 ctttgcccat taaaaacact tcgccgtttt cggtgacgac tttcacttcg gtggctttta
     7081 cctcgctatt tactaacagt ttggatttca cttgggtggt aatccagctg tcttgtgtaa
     7141 tctgtccaaa gccgattttt tcgccttggc ggatttcgtt gtaaatttcc gtcacgccct
     7201 ccgccccagc agcgaggttt ttcgcatttt ccactacgtc catacttggt gcttgcccga
     7261 ttaataacac tttgccgttg taagccacca cgttaatgcg ggcttcttgt ttgatttgct
     7321 cgtctttatt aatgttgtaa gcgacttttt cttctaaaat ttcatcatca acttgcgtgc
     7381 cggtggtgcg tgggtctgtc gccactttag ttgcaaccgc cgcagaagtc accaccgccg
     7441 tggtgataca accttgtaaa gagataaaac ctaatactaa taggctgccc tttaatagtt
     7501 tatttgctaa tttgttcata atctctcctt acgaaaatag taaatggtcg ataagttcac
     7561 ataataaatt cacataaaaa tgatggcttt caatcaccct cagttgattg gttgaagggg
     7621 ctgaaatttc aatatcactt tcatctaata agccgagtgt gtggtcgtta ttactgcctg
     7681 ttaaagcaat aatatctaaa tctaaatgtt gatttttcgc cgtatgaata gcttgcaata
     7741 tacattcttc attacccaca ggcgaaaaaa caatgaagag atcaccctct tttgcaaccg
     7801 cctgcaactg ttttttataa acagcctcta actcgttatc ttgtgccaca actcctgcca
     7861 atacaccgct taattgcagt tgtacggcag caaaactcgg tcttgccagt tcataacggt
     7921 gaagtaagtg gctgaccaat aattcggcat taccgtaaga gcgaccgtgt ccgcagacga
     7981 taactttatc gccacgcaac aaacaggcaa caatgcggtt tgccgcttca cttaatttag
     8041 ccggcaatag ctcagaggcg gaaatttggg tttgaatact ttcggtaaat ctatcttgga
     8101 ttttatttaa cattctttct aacctaaaaa gttgggaatc cacacaggcg tttggtttcc
     8161 ttcaaaagca accacatcaa aacggcaatt tgcagtttct aaactttggt tttgtttaag
     8221 caaccacata ttagcggcat tttgccattt ttgttgcttg cggtaatcaa tactctcaac
     8281 ggctgaaccg aagcggttgc ttttacgctg gcgaacttct acaaacacaa cggtttgtcc
     8341 gtcttgcata atcggatcca gttcgccacc tttaaatgct tggttagcgg caacaaaacg
     8401 aagcccttgc tgttctaaaa acactcgggc tttttgttca taaaacgagc cttgttcccg
     8461 tttattaata agcttgttga atagctccat tgcgatattg catccaagat aaactacgtt
     8521 caatattaca atgttgtccg gcttttaact caccggttaa acctgaaatt ttgtagcccg
     8581 gaatatggcg gaattcattg aatttggttg ccaatgacca cgcatcagcc cccattgcgt
     8641 ataaacgcat cattgagaaa tcgctattgg ctaaattctc ggctttttta tattcactag
     8701 aactttgatc agctaacagt ggcacttcac taaattttac cccttccatt gaagtgtaaa
     8761 aatcaatgcc gttatttggc gaattactgc gagatgaggt atagatcgct aaacgatctt
     8821 ttaaggttga gctatcaata ccttgtttaa tttctaatac ttgctcggca ttccccaaaa
     8881 tatataaagc tgctttgctc acacctgcat tttgaatagc ggcaacggca tcaagcggtt
     8941 ggttgtagta acgcacatca gcatcgctat tggtaagctg acgccagcgt ttggcaaagg
     9001 cttctgccga gcggttgccg tagtcatctt gaggggccgc aacgatagcg acactattac
     9061 cgtcttgata aattttttcc gcccctgatt gtgcctcaga ttcaggagat aaaccgtagt
     9121 aacacacctg agcaatatta cgcacatttt cagtggcatt cagtgccaaa atattcacgt
     9181 tttggatttc tgggctaagt agcatttcat caacacgaga tttgagcaat ggcccgacaa
     9241 tcacatttgc cccttgctgt tttgcctgtg aaattaagga attaacatca gatgaatcgg
     9301 tatcaaaagt ttgcactgcg gttgagtcat cagccttagc atcattaaaa ccacgcttga
     9361 taatatcacc caaaattttt gcatcaccac ttagaggcaa tagcaatgcg acactgttta
     9421 actgggtttg ttggaaatta ctcacccctt gtaattccgt tggcattacg gcaaccgcac
     9481 tatggctcgg gtattgggct ttccaattat taattgcttg tggcatttgt gccggtgtcg
     9541 tcacattttg attatagata ttaattaatg ccaaccaacc agcaagctcc atctcacccg
     9601 cttcaggcac agttttttcc agcattcctc gatttgcatc acgcaaggtt tgccaaataa
     9661 tatcgttatt ttcttggcgt tcacggttca ttttatagaa attgttaagt tgcgatcttg
     9721 cacgcacaat gccaatcaca tctttctgat tggcagcaat acgggcttgg gtttgaatat
     9781 aacgcaaacg ctgtgccgaa cttaatagcg gatcttgaat ggcttttaat tggcttgttg
     9841 cttgctcgtt tttcccttgt aaggcggcaa gctgggcgga aaccaaggca tactctaact
     9901 tttgcacctc gttcatctct gcggtcagaa tttcactaaa ggtattttga gcctcatatt
     9961 ccttattttc atcaattaat ttgcgtacag ctaaaagttg atacgaaatt ttatcttccg
    10021 cttctttggt ttgatctgct ttattaatat agaattccga gcttgaatag gcttcatttt
    10081 taatggattc ggtgacagga tttaccgatg tacaggcaga aatgaataat gcaatcgccg
    10141 ttggcaccaa tgcctttttc attgtatggt ttaaaatagt tgccattgtc agatcctcaa
    10201 tagaatataa tgtgctaaat ttaatgtgaa atcttactta tcaaacgagc taaaagcaaa
    10261 tgaaaaacag acaaaattca tctggaatca acccaaatta cggaatttta tatattgttg
    10321 ccacgcctat cggcaattta ggcgatatta cccaacgggc gttagacacc ctttcatctg
    10381 tcgatttagt cgccgccgaa gacactcgcc acagcggttt attgctgagc cactacggca
    10441 ttaaaaaacc gtttttcgcc ttgcacgacc ataatgaaca gcagaaagcg gtcgttttag
    10501 tcgaaaaatt agcaaaaggg gaaaacattg cgttaatttc cgatgccgga acgccactga
    10561 ttagcgaccc gggctttcat cttgtccgtc attgccgcca agccggggta aaagttgtgc
    10621 cgatccccgg ggcttgtgcc gctgttactg ccttatgtgc ttcaggcata gcttcagacc
    10681 gtttttgttt tgaagggttc ttaccggcaa aaacaaaatc ccgttgcgat aaacttaccg
    10741 agcttgaaaa cgagcctcgc acactgattt tttatgaatc cacccaccgt attttagaca
    10801 ctcttgccga tatgcagact gtttttggcg aagatcgcta tgtggtaatg gcgcgtgaaa
    10861 tcacgaaaac gtgggaaacc atttatggag atcaactggg taacttaatt gaatggctaa
    10921 atgaggatag caaccgaatt aaaggcgaaa ttgttctggt ggttgaaggt aaaccgcaaa
    10981 gtagtgagga agccttttcc agccaagcga tcaaattact gacattactc tgccaagaac
    11041 ttccgcttaa aaaagccgct gccattgtgg cagaaacctt cggctataag aaaaatgccc
    11101 tgtatcaata tggattggag cattttgagt aacagacaag cggtcagatt ttgtgagttt
    11161 tttgcagatt ggcactcccc tctctctgaa aaatgtttct gaacgaaaca tttcccggtc
    11221 tcaatactcg ctacgctcgc tccttcggag ccgttggcaa agccaacgtt caaatgtaaa
    11281 catttgtccc ataaggggag agagctaaat tattcgcttg tcgacccctc tccactcgtg
    11341 ggagagggac agattcttct tcgttcagaa gaaaaatcag ggagaggggg aagtttctcg
    11401 cactaaattc cgataagcat atgccataat cgcaaacatc aacagcaagt aaagcggtaa
    11461 taattgaatg ctgatagcat tagcaataaa gccgaaaatc ggtggcaata acaggacgcc
    11521 gatataggca cttgccattt gcacgccgat caccgattga gacttgtcct cgccgaaaaa
    11581 cgcaggggtc gaatgaatta agcacgggaa aatcggggca caacctagcc cgataataat
    11641 taaacttgcc agcgtaacat atttgcctaa cggcaagcac agtatcgcaa tgccgactaa
    11701 gatcaaggct gaaccaagtt taatcatttg tctgttgcta aatttaagcg tcaagaagcc
    11761 acttacgcct ctgccaacgg taatgccgat aaagaaaata ctgccgaacg cagccgcttg
    11821 ttctaagccg acatctttaa ccattacaaa atagctactc gcccacagtc cggcggtttg
    11881 ttctacgcca caatagccaa aaaaagctaa aatgccatat ttcacgcccg gaatttttag
    11941 cgtttctttt aagctcatcg gttttgccga atggttgatt tcagcggtaa tctgcttgcg
    12001 taatttccaa aaaggcagtg agcaaaacag cattagcgtt agcccgattt gtaacattga
    12061 aatggtgaaa tagcctgcct cccagcctcg cccttgcaat aaggcgtagc ctaaaatgtg
    12121 cggcccgata gaagctccaa cgccccacat acaatgcagc cagctcatat ggcggcttgc
    12181 gtagtgaact gctacatagt tattcaacgc cgcatcaacc gctccagccc ctaagccgta
    12241 aggaattgcc cataaacata agatccagaa agcatcactg attgaaaagc cccacaatgc
    12301 taaagccgtt aaggcaacgc tgatgaccat tactttgcct gtgccgagat ggtaggtcag
    12361 tttgtccgac attaagctag aggtaatagt gccaatcgac ataatcatcg agaccacacc
    12421 ggcataggaa agcggaacag caagctgttg gtgcattgac ggccacgccg agcctaaaat
    12481 tgcatcaggc aacccaaggc tgataaaaga gagataaata atagcgagta ggaggttagt
    12541 catagcttac aatcggtcac aaaaagcatc gctttttgaa cgttggctct gccaacggga
    12601 gcgaagctgt gaacaatcct tacaaggatt gtgaataatt tttgataaat tttttgtaaa
    12661 aaaatggctt aaggagacct taagccaaat tttattattt cacttctgcc aaataggcct
    12721 tattagcacg gtcaaaggtg tctaatacgg ctttgcttgg cattggcgtg ataagtgata
    12781 ccacaatgat cattagggta gcagcaataa agcccgggat catcgagtaa atttccggta
    12841 aggcgagctt aagtgtaata tcgccccaaa aatgcacgat taacgcaccg gtcagcattc
    12901 cggcaatcgc cccaaaaccg ttcatacgtt tccagaatag tgaaagcaat accacaggcc
    12961 caaatgccga gccgaaacct gcccacgcat tacgcactaa gccaaatact ttgctgtccg
    13021 ggtcttgggc aatataaata gctaatgctg ccaccgcaag caccatcaag cggcttaacc
    13081 aaaccagttc tttatcggag gcttgagggc gtaaaatgcc tttgtataaa tcttcggtaa
    13141 tcgcacttga acaaatcagt aattgagcgg aaagggtact cattaccgca gcaagaatgg
    13201 cagataataa aatgccggct acccaagggt taaataacaa tttagctaat tcaatgaaaa
    13261 tttgttccgg atttttgctg atattgccga cttgctccgg gttgccaaag aaatatgcca
    13321 taccaaaata accaatgcct attgccccca gtaagcagat aatcatccaa gtcatactga
    13381 tacggcgtgc attttcaaga gacttcacac tttctgccgc cataaaacgc accacaatat
    13441 gcggttgtcc gaaataaccc agcccccacg ccattaagct gataatgcct aatacgctgg
    13501 tgccggtgaa aatgtcgttg tagtcttttt gtgccatctc gcctgcacgg tcgattaagg
    13561 cttgcatttc atcaaaacca cctaagttat acatcacaaa aaacggggtg agaatcaggg
    13621 caaaaaccat taatgaagct tgaatagtat ccgtccaact tactgctaag aaaccaccaa
    13681 taaaggtgta aagaatggta gcaacagccc cataccaaat tgcttggtgg taaggtaagc
    13741 caaataagtt ttcaaatacc ctcgcaccgg ccacaacgcc tgatgcacag taaattgcaa
    13801 aaaagagtaa aaaaatgacc gctgataaaa tcttaattaa acgggtttta tcgccaaaac
    13861 ggttatgaaa atattcgggt aaggttaagg catcgccact gtgttctgta tgcgagcgta
    13921 atctgcctgc gactaatttc cagtttagat aagcaccgat agttaaaccg attgcgatcc
    13981 agccttcgat caaaccgcct gcataaacgg ctccgggtaa tcccatcagc aaccagccgg
    14041 acatatctga tgcaccggca gaaagtgcgg tcacaaagct acctaaacgg cgaccgccta
    14101 aaatatagtc tgaaaggtta ttggtaacac gataggcaat aaagccgatg gcaatcattc
    14161 ctagaatata gacaacaaac ataattgttg ttggatcaag accaaacatt attaatgaat
    14221 cctcaagatt tcttattgta taaagattaa agtgagtaaa gggtaaaaga ttacctgaaa
    14281 taatcaaaat ggcaacacaa aattaccgtc cgcccagctc agctgaaatt ttttctgctg
    14341 tttcttgaat agccggtagt agattttccc gccccagctg atttaaacga gcagttgaaa
    14401 gcgaaacaga aatcgcataa tggacttttt gttggtgatc aaaaatcggg caagcaatac
    14461 aagaaacccc taattcattt tcttcgttat ccattgcaaa accttgacgg cgaatggttt
    14521 ccagctcggt ttgcattccg tcaatcgtgg tgatggtatt gaccgtcagt ttttgaatga
    14581 tgtccgattt agtctgccaa tattgtggaa tgtaatctgc cgaaccataa gcaagaaaca
    14641 gttttcccat tcccgagcaa tagagttgca tttgttgccc gatataggct cgggtacgca
    14701 tcattccggt ggtagcttct aatttattga ttaaaatagc gtgatcgttt tcccgcatcg
    14761 caaaatttac cgtctcgcct aaggttaaat ttagggcttc taaatgtggg gcggcaatat
    14821 gcaaaatgtt aatcgaactt aaggctcgct gcccgattgc caaacatttg gtggttaaac
    14881 gataactgcc cgcagtcggt gcagggcgga cgtagccctc ttgttgtaag ccttgtagca
    14941 gacggtgaac cgtgcttttg ttcagccccg aaagctcggc taaatgggca agcggacagc
    15001 cgtttgggaa tttcgctaac aattccaata gtgttaagcc acgaattaaa ctttgatttc
    15061 cactcgattc cttttctttc tttgcattca tttggctgct cccaaaataa tatgatctaa
    15121 cggcatatcc caactctcaa tcggtaattg ttcgacttgc tgacattcgt gtgccaaacc
    15181 gacactaatc agatgaggtg cttgagcaag ggttctatca taaaagccac ctcccattcc
    15241 cagccgattt ccggctttat cacaagcaac aagtggggta aaaatcatct ctaattcttg
    15301 caacggaagg atatttctaa catctaatat cggctcttga atccccaagc ggttaaattt
    15361 tagaatagtt ttgcaattgt aatttacaaa caataattga ccgcttgtaa aagggtgcaa
    15421 cagcggcaga tacagctttt tgccctgttg aagtaattgt tccattaaag gaataggaga
    15481 aatttcaccg ttaaaaggca aataaaaggc aatatgtgag gcttggtaag attcaatcaa
    15541 tgaaagagct tgaggaataa tggattcggc tgcttgagtt tgctgaccgg cagttaaact
    15601 ttgccgttta agccgcattg attgccgtaa ttggctacga agatcggtta aagatgattg
    15661 attcatataa agacccgaga tgccgctacc agtaatggtc cttgaaccag tcggttcaag
    15721 ggagtcaaac ttaactgctt ttaggcttct tactcctaat taaattaggg taagcttgct
    15781 caccagcgtt agatgtccaa ctcaaagttt caaattatcg gctcagggac gtaactcgta
    15841 acgcacaccc caggcaagac ttatagtaac ggaatttgat gatttttcct agtatttaat
    15901 cccacaaaat gcaaattctc aatctttttg gctctattcc taatcaattc gattaaaaat
    15961 tacctaattg gattgaaatt tgccaagcga attatctaac tgctcaatac aagccaccaa
    16021 cacattttta ttttctgcat tttggcgttg ggcttgctcc agttcataat ttaaattcag
    16081 tgccacaatc gctaacactt tttcaagctg aataatgccg gactgctctt tcaataccac
    16141 cacacgctct tccaaacgct gtgctgaagc cagtaaatgc tcttgctgtt caacagggca
    16201 ttgcaagcgt aaaacctgcc caaaaatctg tagttcgata ttatttgccg acataaatac
    16261 gaaatcctca cttaatcgca aaatttttgc tatattatgc cattctttag caaaatcaca
    16321 aataatccca ttatggctat cacagattcc caacaattta aacaactggt atcacaatta
    16381 caaattgatg atacaccggc agagtttcac ggttttttat gcggtttaat tgccggcggt
    16441 attcaagatg agtcttggaa aaccctcacc taccaattta ccaatgacgg acacgcattt
    16501 tccatcgagc cgttaaacac tttaaccgat ttttatcagc aattaagtga aagcttttca
    16561 gaagccaaca cgctgtttag cctttggttg ccacaaaacg aagaagatgg ttttgcctta
    16621 gctgatggta tctccgaatg gacaaacagt ttcttacttg gacttggcgt tgctcaacct
    16681 aaattacaac aagaaaccga tgaggttggc gaggcaatcg atgatttaga tgaaatcgcc
    16741 aaactaggct acagtgacga tgataataac gaggaactac tggaggctgg cgaagaagtg
    16801 ttggaatatc tgcgagtttt agccttattc ttgcacagcc attttgcttt aggcgtgccg
    16861 aaaaccgaag aaaagccacc attacactaa tgaataaata caagcggttc aatttcatct
    16921 ctattttgca aatatattat gcggggcgaa aaatatttcg cccctaccaa aatcaaagga
    16981 aaaaccaatg tcagaattaa aaaacgatcg ctatttaaaa gcgttattgc gtgaacctgt
    17041 ggatatgacc ccggtctgga tgatgcgtca agccgggcgt tatttgccgg aatataaagc
    17101 cacccgagca gaagccggcg attttatgtc actctgccgt aacgctgatt tagcgtgtga
    17161 agtcacctta caaccgctac gccgttatga actcgatgca gctatcctat tttccgatat
    17221 tttaactgtg cctgatgcaa tgggattagg tttaagtttt ggtgcaggtg aaggccctaa
    17281 atttgcccgc ccggtggcaa gcctcaatga tgtcaatcag ctaccgattc ctgatccgga
    17341 agacgagttg caatatgtaa tgaatgcggt gcgtaccatt cgccgagaat tgaaaggcga
    17401 agtgccacta attggttttt ctggcagccc ttggacactc gccacctata tggtggaagg
    17461 tggttcaagc aaagcattta ccaaaatcaa aaaaatgctt tacgctgagc ctcacattct
    17521 acacaaattg ctggacaagt tagctgacag tgtcatctta tacttaaatg cccaaatcaa
    17581 agccggtgct caagcggtga tggtattcga cacttggggc ggtgtattgg ctcacgagga
    17641 ttacaaagcc ttctcattac actatatgca caaaattgtg gacggcttaa ttcgagaaaa
    17701 tgaaggacgt aaagtgcctg ttaccctatt caccaaaggc ggaggcttat ggttagaagc
    17761 gattgcagaa acgggctgcg atgccgttgg gctagattgg acagtcgata ttgccgatgc
    17821 tcgccgccgt attggcgaca aagttgcgtt gcaaggcaat atggatccaa gcgtgctgta
    17881 tgcaagccct gaacgaatcg aacaagaagt aaaaaacatt cttgccggct tcggcaacgg
    17941 cagcggacac gtctttaatc ttggacacgg cattcattta gatgtgccgg tggaaagccc
    18001 gaaagtgttt gttgatgcga ttcacaacta ctcgaagcag tatcataaat aatggataaa
    18061 atgccctctc tccttgtggg agagggacag atttttcttt gttcagaaga aaaatcaggg
    18121 agaggggcaa gcggtcattt ttatacagaa ttttgcaaaa tcgttccctt ctctctgaaa
    18181 aataaagaag gaaatacaat gagaaacccg attcataaac gcatggaacg tttcgagcct
    18241 tggcaaaaca ccacatttat ggcgtgccta tgcgaaagaa tgtaccccaa ctatcagctt
    18301 ttttgtgaag taaccgaaca gcctgaaaaa gctaaggtat tccaaaatat tttaaattta
    18361 gtctgggaat atttaaccat aaaaggggca aaaattaatt tcgataacca actggaaaaa
    18421 ttagaagaaa tcattcctga tgtgaacgaa tatgcgtttt ttggtgtctt acctgcacag
    18481 gaagcttgcg aagccctttc tgaacttctt cacagtatta tcgctggttc aacccttgaa
    18541 caagcaatcc gcatcagcca aatttcatta ggcacagttg ccagctattt ggaaatgcaa
    18601 caagataaag aactgaacga gcaagagcta aagaattctg aagaaattca agaagaactg
    18661 gacgtacagt ggcaaatata ccgcttgcta aacgaatgtg aaaaacgtga tcttgatctc
    18721 atttttgaac ttaaagatga aatcagaagc agcgggatta gtaatatcgg gttaaatatt
    18781 aaccaatagc attgatattt gcaaaatctt gcttaataat actttgagaa atcttaactt
    18841 tgaattaagc tatcgcaagg tttcaataac ttctcagacg ttttacgtca tttattaaaa
    18901 acacatatct tagaggataa aactatgaac aaaactgagt taatcgatgc tatcgccgct
    18961 ggtgcaaact taaccaagaa agatgctaaa gcagcattag aagcaactct tgatgcaatc
    19021 tctgcaagct taaaagcagg cgacgctgtt caattaatcg gcttcggtac ttttaaagta
    19081 aatgagcgta aagcacgtac tggtcgtaac ccaaaaactg gtgaagagat caaaattgca
    19141 gcagctaaag tacctgcatt cgtttcaggt aaagcattaa aagatttagt aaaataattc
    19201 tttaaagata taaaaataaa gcctggatta taatccaggc tttattttta gcgtgtttcg
    19261 atagctacag agaaactaaa aagcactatt tgctttcaat cgcttttttc atttcttcaa
    19321 cttttgtttc tgtctcaact ttcacttctg ctgccttctc agctactgcc tttttagctt
    19381 cttctgcttt atctgctgtt gcttgagtcg catcacttgc tgctgctttt agttcttcca
    19441 ctttagcttc agttgtggct tttaactcag cagctttctc tgctactgcc ttttttgcct
    19501 cttctgtttt atctgttgtt gcttgagctg catcatttgc tgctgctttt agttcttcca
    19561 ctttagcttc agttgtggtt tttaactcag tggctttctc tgccactgcc ttttttgcct
    19621 cttctgtttt atctgctgtt gcttgagctg catcatttgc tgccgctttc aactcttcaa
    19681 ccttcgcttc agtagccgat ttaacttctg cagctttttc agctacagct tcttttactt
    19741 caaccgcttt gtctgtagtt gattgcgcgg cttcttttgc ctgatcacaa gcagcaagtg
    19801 ccatagttgt acctaacact aataatgata aaaatgattt tttcataccg agttccttaa
    19861 ataaactaaa aataacgcac tttgtaataa agtgcgttta cttaggcaga aaaattgata
    19921 gaaagttcat actttgataa aaaaatgcct attagttata actaataggc atttaaacca
    19981 attaattgta cttaaccatt ggttgaacga ggcgctgact gcacttggct cactgcgctg
    20041 gtatatccgc caaacccttt gccatagaaa tagtatttag agttttgcca ttggctaatt
    20101 tcgactactt caagcttgtc acttggtgca gaagcaatgg tcatagcggc ttgggtatgc
    20161 tcaacacgag agaatgtacc taatctgccg ttaaatcgat aatcgctttc gtaagttgat
    20221 tttggcactt caatcgggtt agtaacctct tccacaatcg ctggtgcaac cgttgcttgc
    20281 gattggaatt tactgactcg ctcatttttc tctttaacta aatcacgttc agaatgctga
    20341 gcaacaacac taccaaatgg agcaatatgc tcttttacct ctactggttt tacgtcttca
    20401 gaagcaactt tttcttcttt cggtttggaa agctgttctt gcttctcctt aaccaaatca
    20461 cggttagttg cttgtgctac aaagccacct agcggactaa ctgtatgaag cttcttctct
    20521 tctgattttt tctctgtctc aacaagctga ttttcttgct gttcaagcat ttgatcaaca
    20581 gataagaatg atgctttttc ctctactttg acagtagagg taacctgaac ccaaacttta
    20641 ccgctcgcaa gctcaggcga agcaacagct gaagttagag gcataggaga aataacctga
    20701 ttgcgttgat tttcacgacg acgctgattg cccacacgca aatggcgagg taaacggcgt
    20761 tggcggttat tttcacgtcc ttcgttcgtt gtttctacct caggagctgt ttcaacaggt
    20821 acttcttggg ttgcaagcgg ttgaatttgt tgattttttt gcacattttc aacttgtttt
    20881 gccaccgttt cctcaacagc aggtgttaga ttttccactt ctacttcttg tgtttcgata
    20941 cgcacttttt tacgtagatc acggcgttgg cgacgttcag tttgaacctc acgggagttg
    21001 ctacgactct cttgctcggt tacaccggaa acttcttcca ctaccgctcg gcgtgctttt
    21061 ttctcgctac gcatcggttt ttcttccgct ggagtagttt gagcttgcgg agttttacgc
    21121 tcttgatttt ccgctttagc attacggttc gggcgttcac ggcgttggcg acgctcacgc
    21181 tgattgcgtg ctttcggctt cggtttttct tccacttttt cttcactaaa ccagccttta
    21241 atggtcgcaa ttaagcggct taacagcgat ggttttggtg gttcggttgg tgttggcgaa
    21301 ggttggagat tcagctccga gctttgtaac actgactcta ccgtaatcac cggctcgtta
    21361 cgggtaacca gcacatcttc ttgatggtga tgatgtgggt gttcttcttc atgacgagct
    21421 tcgtaatgct tggttaaatc gtagcttaac gttggagtaa tttcattttc acgcaggcga
    21481 tatacgctga aatgcggcgt ttccatactt tcagacggta ctacaacaat ttgtacatcg
    21541 tggcgttttt caatgctgga aatcgcttta cgtttttcgt tgagtaagta gctggcgatt
    21601 tgcaccggca caatggtgtg aacctgtgca gtgttttctt tgattgcctc ttcttctaat
    21661 aaacgtaaga ttgacagtgc gattgattca ttatcacgta ctttaccagt tccctgacag
    21721 cgagggcaga tatgcgatga agcctcactt aatgatgggc ttaaacgctg acggctcatt
    21781 tctaacaaac cgaaacggga aatacgggca aattggattc tcgcacggtc ttggcgtgtc
    21841 gcctcacgaa tacggttttc tacttcacgt tggtggcgaa ccggtgtcat atcgataaag
    21901 tcgatcacaa tcaaaccacc taagtcacgc aaacgtaact gacgggcaat ttcatctgcc
    21961 gcttctaagt tggtgttaag agcggtttct tcaatatcgc cgccacgggt tgaacgtgag
    22021 gagttaatat caattgctgt taaggcttct gttacatcaa taacgataga gccaccggaa
    22081 ggtaaacgca cttcacgttg gaatgccgat tcgatttgcg attcaatttg atagtggctg
    22141 aatagtggta cttcgccttc gtataatttc acacggttga tgaaatccgg gcgaacaagg
    22201 cgaatgtggt ttttggcttt ctcgaacact tttttgttgt cgattaagat ttcgccaata
    22261 tcacggcgta gatagtcacg aattgcacgc acaatcacgt cactttcttg gtgaattaag
    22321 aacggagctg ggcgagattc cgccgctttt ttaatcgctt cccagtggtg taacaagact
    22381 tttaagtccc attgtaactc ttccggcgat ttgccgacac cggcggtacg aacgattaag
    22441 cccacgtctt ccggtacatc taagcagtct aaagcctctt tgagttctaa acgctcatca
    22501 ccttcaatac ggcgggaaat accaccggca cgagggttgt tcggcattaa gactaagtaa
    22561 ctgcccgcaa gcgaaataaa ggtggttaag gctgctcctt tgttaccacg ctcttctttg
    22621 ctgacttgaa caatcacttc ttgcccttct tgaataatat ctttgatatt cgggcgaccg
    22681 ttaaacacat agtctgacgg gaagtattct cgggaaattt cttttaaagg taggaagccg
    22741 tggcgttctg caccgtaatc tacgaatgca gcttcaaggc ttggttcgac acgggtaatt
    22801 ttacccttgt agatattgga ttttttctgt tcgtgacccg ggctttcaat gtccaagtca
    22861 aataagcgtt gcccatcaac gagggcaaca cgcaactctt ctttttgagt tgcattgatt
    22921 aacattcttt tcattgtgtt ttctcattat tttgtttttg tcttacacgg tcattttgac
    22981 ccattaataa gggaatggat ttaatgtcta tctcacgact gtcttcattc ccgatagtgc
    23041 attgatggtt gtcttacgtt tactttgtct tgtcttaaag aaactgcaaa atcaatcact
    23101 taaggcttgt ttatctctat tacaagcggt tatttttgct ttattttttg caattttcta
    23161 ttgctttttc aagccaaaaa taacgagtca ttatcgcatt ttaaccctga aaaaggcaag
    23221 gtaattgttg tatggtagct gttatttgtt gtggagatga atataatgaa aatgaatggg
    23281 gtgataagga aaaataatga gatttagtgt gagtgctgga gataagcgtg aaatccaagc
    23341 ggttaaattt gcaaaaaaag agctaaattt aaccgcttgt aaagcgaata ttatgctttt
    23401 gccgtcattt ttttcactgc ttcttcagtg gtccagaggt catttgcgat aatacggtag
    23461 ttggttaatg ctgcaaggta gccgtcacct tcaggaatac gaggccctgc ggttgcatct
    23521 ttcaccactg ttacttcaaa accttgttcg attaattcac gcaagtgtga atcaatacat
    23581 aagttggcag ccataccggc taaaattact tggtcgattt tacgtttgcg taattgcaac
    23641 actaagtcat tggtttccgg tccaaagatt ttgtgtggag aggtaatcac tgttttgcca
    23701 tcaaaaatgt atggtttgta ctcaggcata aagtctgcac ctgaattttc aaagccttcc
    23761 atggtgtatt gaccttttct cgcaaacatt ccgctgtcgt gcataaagtg ttcacccggt
    23821 gaaccaaatt cccatttgtg atcagtcggg taatagtagt gtggcgaaac aaaggttggc
    23881 atatcgactg cttttgctgc tttaaataag ctttcaatgt tagctacagt gttgttttct
    23941 ttaattgagt cacctaacac gccccacatc acgcctttcg ggcctaggaa gtcaatttgt
    24001 ggatcaacta ccactaatgc cacacgtttt ggatcaatgg tcattccatg gcgttttaaa
    24061 ccgtattgtt ccggctcggc ataaggtgat ttttctgcac tggcttgttt tgcatttgct
    24121 gttgatgcaa tacctaatgc acctaataca ctggctgcca ttgcaatacg agagccgtgg
    24181 ttaagggctt gacggcgttc ttggttgatt tcttcaaatt gttcctgtga catcatttta
    24241 tcctcattaa tagatataca aattgtaatg ataacttgcg ttaccgaacg ggttgctatt
    24301 atagtgatcg catttctcct gttttaaccg ttcgtctcaa ttctttaccc aaggagctta
    24361 atgtggatag tttgactcat ctttttaccc aatttcagtt tcgcacggat ttatttcatc
    24421 taggtcagtt atgccaaatc gggagtttta atgaagagaa taaaggctat ttacatttcg
    24481 ttcgtcaggg acgttttatt ttaaatcagg ctgccgaacg cccgattacg attgaacgcc
    24541 cagcgattat tttttcacca accaatattt tgcatagttt gcacccgtta gatgatagtg
    24601 ggttagatat attttgtatt aattttgatt ttggcaaagg gattcgcaac ccattaactc
    24661 ataccttgca caatattgtg atcttagagt tggcacagta tccggaattg ggggtattag
    24721 ccgatcaaat ttttagtgaa gtgaatcaga aagggtgtgg ttatcaggca atgattcatc
    24781 atttatgtgc ctattttacc ttgaaagttg cccgccaatg tttggaaaaa gggtatattc
    24841 aaacaggttt gttaaaaggc ttggcagata agcaactggg gaaagtgctg ttagctattc
    24901 acaatgcacc agagcgagat tggaatgtag aggagttggc aaatgtggca ttaatgtctc
    24961 gctcacgctt tgctgcttat tttaaacaaa cgatgggggt ttcaccgatg gattatctca
    25021 ctaactggcg actagcggtt gcccagcatt tattacaaaa agggatacca gtagcattgg
    25081 tggcagagca agtcggttat agccataatg ctgctctcag ccgtgtcttt atgcgggaat
    25141 tagggctttc gcctaccgag tggctggctc aaaataaaga gtcgtaacct gatgagaaac
    25201 aaatagccga atggtaaaaa tgtcaaaaaa tttaaccgct tgttatgttg cacaagcggt
    25261 taaatgttgc cttaaatgcc aagagaatcc caaatctcat caatgcgttt caccacattg
    25321 tcatcttttt cgatgggtgt tccccattct cgggtggttt cacccgccca tttattggtg
    25381 gcatcaatcc ccatttttga gcctaaccct gcaattggcg aggcaaaatc gagataatct
    25441 atcggcgtgt gttcaatcag tgtcgtatct cgagccgggt cacaacgggt ggtgatcgcc
    25501 caaattacat ctttccaatc tcgagcgttc acatcgtcat cgcacacaat cacaaacttg
    25561 gtgtacataa attgacgcag gaacgaccaa actcccatca tcacccgttt agcgtgtccg
    25621 gcatattgtt ttttcatcgt cactaccgct aaacggtaag aacagccttc aggtggcaag
    25681 tagaaatcga caatttccgg aaactgtttt tgcaaaatcg gaataaagac ttcattcaat
    25741 gcttcaccta atactgccgg ttcatcaggt ggtctgccag tgtaggtaga atgataaatc
    25801 gcatcttttc gcatcgtaat atgggtaacg gtaaataccg gaaaatactc ttgctcgttg
    25861 tagtagccgg tgtggtcgcc ataagggcct tccaatgcgg tttcttccag atcgatatag
    25921 ccctccagca caatttcgct acttgccggc acttctaact cattggaaat agatttgacc
    25981 acttcggttt tatgccctcg caacagccct gcgaacgcat attccgaaag cgtatccggc
    26041 acaggggtga ctgccgctaa aatagtggct ggatctgcac caatcgcaac cgacaccaga
    26101 aacggtttac ccgggttttc ggctttccac tcttggaagt ctaacgcacc gccacggtgg
    26161 gaaagccaac gcataatcag tttgtttttg ccgataagtt gctgacgata aatgcctaaa
    26221 ttctggcgtt ttttgtaagg cccttgcgta atcgtcagcc cccaagtgac cagtggagcg
    26281 acatcgcccg gccaacagtg cataatcggt aatttgtaga gatcaacctc atcacccgaa
    26341 atcaccactt gctgacaatc ggctttgctc agtaccttag gcggcatatt taaaatttgc
    26401 ttccattgtg gcagttgccc gatcaaatct ttaaaccctt tcggtggttc aggctctttt
    26461 aaaaaggcaa gtaacttgcc cagctcacgc agagctttgg tatcttcttg ccccattccc
    26521 agagctaccc gtttgggcgt gccgaataaa ttacacaaca ccgacatttg atagcctttc
    26581 gggttttcaa acagtaatgc cggcccgcct ttgcgtaagg tgcggtcggc gatttctgtc
    26641 atttctaaat aaggatcgat ttcttgctga atacggacta attcaccctg agactcaagg
    26701 aaatcgagaa attcacggag atttttatac ttcatagcgg tcatattttt cgattttttt
    26761 gcaagtatat agaaaaacgt aaatgaaaaa tacccataaa aaatttatag aaattttgtt
    26821 ttattttgtt agaatagctc ggttcaaatt aaatgccata aggggaattt tatgtttaaa
    26881 agaacattaa tcggtctagc cgtgttaggt gcaagtgttg ctcaagcgga tgtattaacc
    26941 agtattaagc ctttaggctt tattgccagt gccattaccg aaggggtaac tgaaactaaa
    27001 gtattattac cggtaactgc ctctccacac gattacagct taaaaccttc agatgtgact
    27061 caattacaat ctgctcaatt agtggtttgg gtgggtgacg gcttggaagg ctttttagaa
    27121 aaaagtattg aaaaactgcc gagagaaaaa gtattaaccc ttgaagatgt tgatgcgatt
    27181 gatgatattg tcgataaagc aagcaaaaaa gaagataaag acgatgatca cgatcataaa
    27241 catgaacata agcacgaaca caagcacgag cataaacacg aagggcataa tcacgaagga
    27301 cataaccacg atcatcacgg acatagccac gatgaagatt ggcatatttg gctctcaagc
    27361 gaggcaagtg agctggcagc agagcaaatt gcggcacgtt taagcgaaca aatgcctgaa
    27421 cacaaagcga aaattgcgga aaatcttgca aaatttaaag caaatctaac cgctaaaaaa
    27481 gccgaaattg cgaaacaatt agagccggta aaagccaaag gttactacac attccacgat
    27541 gcttacggct attttgaaag agaatatggt ttaaattcat tgggttcatt taccattaac
    27601 ccaactgttg ccccgggtgc aaaaacactt acagcaatca agaaaaacat tgcgaaaaac
    27661 aaagcacaat gtttatttgc cgagccgcaa tttacgccga aagtaattga aaccttagca
    27721 aaagaaacta aagtaaatgt tggccaatta gacccactcg gtgcaaaagt tcagttaagt
    27781 gcgactgctt accctgaatt tttacaagtt ttggctgacg aatttagcca atgtttaaca
    27841 aaataagtta aaaatccccc atttaaatat aaatggggga ttttgcgatt acatcactta
    27901 agcttttttt aagaattctg atttcaacat aattttaccg caatcgacat tatggtcacc
    27961 ttgagctaaa cggattcctt tgaattttgt accttttttc agtacttcag acgagccttt
    28021 taattttaaa tctttgatta ataatacatc gtccccgtca gataataaat tgccattact
    28081 gtcttttaca attagcacat catcatcttg atccgtttct tcgcccgtcc attcatacgc
    28141 acaatccggg caaacaaatt gaattgagtc gtggtaagta ttttcgcttt tacattcagg
    28201 gcaggttggg taaatcattt taattcctca aattaataaa gaaccagatt atataccgaa
    28261 atccagcaaa acgctaagcg gtcatatttt gccgattttt taccaatcga gctaaaagtc
    28321 agttagaata gccttaatta cacaaaaagg aggatactat gatagtcgat ccgaattatc
    28381 agcaagaatt agaaaaatac gaaaatccgg taccaagccg agagtttatt ttaaatacaa
    28441 ttcgtgaaca taacgcccca atgagccgtg atgaattatt gtcggctttt catattgacg
    28501 atgaagaacg aatggaaggc attcgccgcc gtctgcgtgc aatggaaaat gacggtgaat
    28561 tggtgttcac caaaggcaaa cgctatgcgt tgccggaaaa aatggattta atcaaaggta
    28621 cagttatcgg ccatcgtgac ggttacggtt ttttgcaagt ggaaggacac gaaaaagggg
    28681 cgactaaaag cgaagattgg tttattccca acgcccaaat ggtaaaggta atgcacggtg
    28741 actttgtgct ggcacaacca aacggcacag accgcagagg tcggaaagaa gtccgcattg
    28801 tgcgagtgtt ggaggcccgt aagaaacaga ttgtcgggcg ttttttcctt gaaagcggta
    28861 tcggttttgt tgtgcctgat gacagccgcg ttaaccaaga tattctcatt ccggatgaac
    28921 accgtatggg ggcgagaatg gggcaagttg tggtggtgga attacaggaa agaaaagcga
    28981 gttttagccg cccggtggga atcattactg aaattctagg cgataattta gcgccgggaa
    29041 tggaaattga aattgcccta cgcaatcacg atattccgca catttggccg gaaggggtag
    29101 aaaaacaaat ccgccaattt agtagcgaag aagtgccgga agaagccaag caagggcggg
    29161 tggatttgcg agatctgcca ctgattacca ttgacggcga agatgcccga gatttcgatg
    29221 atgctgtatt tgccaaaaaa gagggcaacg gctggcggtt atgggtggcg attgccgatg
    29281 taagttatta tgttcgccca aaaaccgcat tagatttgga agccctaaat cgtggtaact
    29341 cggtctattt cccgaatcgg gttgtgccaa tgttgccgga agtgctttcc aatggcttgt
    29401 gttcactcaa tccacaggtt gacaggctct gcttggtggc ggaaatgtcg gtttccagca
    29461 aaggggaatt acaagattat caattctacg aagcggtaat gaactctcac gcccgtttaa
    29521 cttacactaa agtgtggaaa atgttggaag gtgatgaagc cttgcgtgaa cgctatgctc
    29581 cattagtgcc gcatattgaa gaactctatg caatgttcca aaccttaatg aaagctcgcc
    29641 ataaacgagg ggcgattgaa tttgaaacca ttgaaaatca atttattttc aatccgcaag
    29701 ggcgaattga gcgaattgag ccgttaatcc gcaacgatgc tcataaattg attgaagaat
    29761 gtatgatttt agccaatatt gctgccgctc gttttgtgga aaaagcgaac gaaccggcgt
    29821 tatatcggat tcacgataag ccgagtgaag aaaaattgct cagttttaaa tcctttgtgc
    29881 gtgagtgtgg cttaacctgg gacgtaggct tagatccaac cccaaaagat tacggtgtac
    29941 tactggagca aattgccgaa cgtgccgata aagagttgat tcaaacgatg ttgctccgct
    30001 cgctgaaaca agcagtgtat gcggcggata atatcgggca tttcggcttg gcattaaccg
    30061 aatatgctca ttttacctcg ccgattcgcc gttacccgga tttactgtta caccgtgcaa
    30121 ttaaatatct gatcgaaaaa ggcaaaggca acactcgcta ctataccgat ggcggtggtt
    30181 atcactacaa gttagatgat atggacgaat tcggcgataa atgttctgcc accgaacgcc
    30241 gagctgatga ggcaacccga gaagtggcag attggctgaa atgcgaattt atgcaagatc
    30301 atcttggcga agagtttgat ggcgtgattt cgagtgttac cggctttggc ttatttgtaa
    30361 aactcaatga gcttttaatt gacggattgg ttcatatttc aacgctggat aatgattatt
    30421 accactatga tgcggaccga caacgtttaa tcggtggcag tgggatcatc tatcgtttag
    30481 gcgatgcagt tagagtaaaa gtaatcaatg tgaatttaga cgagaaaaaa attgattttg
    30541 agttactcac cggtaataag aaaaccggca aaaccgccaa gaaaaaagca aaagcgacag
    30601 aggttcctgt tttcaaagag cctaaaacgg taaaaaaagc caaaaaagtc gctgagaaaa
    30661 aaccggcaaa atctgcaaaa aaacggacaa aaacgaccgc tagtaaatca aggaaaaaat
    30721 agcaaatgga ttacaaaaaa caaattttat tcagcctttt atttgcttta gtaattgcaa
    30781 taataagcta ttttttgttt acctatatcc cgtttgattg tagcgatctg agcaaactca
    30841 acgattcaca acgtttagag tgccgaactg ccgaatttct gggcgtttat tactggctgc
    30901 cgcacactac cacgctgttt ttcggctcgg tgttattata ttgggcggtt tatggcatga
    30961 tttcattagt gcaagcagtg ctcaaacgct aacaagcagt tttgtttttg caaaaagttg
    31021 caaatctcat ctgaataatc cttccaagat caaaggtcta tcaaaaaaga tagaccttta
    31081 ttgtgtaaat aaactaaaac tccttgatag atgtatcaca tatctataaa attccagcaa
    31141 ttaagtggga aaaagtggta aattgtggaa cttttcctta aatttaacct catttaaaaa
    31201 ggtaaatcag taaaatgttt cgtggtgcaa gttcaatcag cattgatagc aaagggcgga
    31261 tcgctattcc gacccgttat cgtgccgagc tattggaaaa acatcacggg atcttagttt
    31321 gcactgtgga tatccgccag ccttgtttgt tgctttaccc acttcacgaa tgggaaatgg
    31381 ttgaacagaa attgttggca ctatctaatt ttgaccctgt tcaacgccgt attcagcgag
    31441 taatgcaagg ctttgctacc gaatgtgaaa tggattcggc agggcgaata ctgcttagcc
    31501 ctacacttcg ccaacacgca caattagagc aacaaattat gctggttgga caattaaaca
    31561 aatttgaaat ttggcaagat aaacaatggc aagcacaaat tgccgaagat cttgcttttg
    31621 gcagttcggc agaaatttta gactgcgaag cattgaaaaa cctgtctctc tagtaattgg
    31681 aaattgagat gagcgagaac ccaaaacata ttacagtatt attgcacgaa gcggttgacg
    31741 gcttggcaat taagcctaac ggtatctata ttgacggtac tttcgggcgt ggcgggcatt
    31801 ctcgcttgat tttatccaaa ctgggcgaaa atgggcgatt aatcgcaact gatcgtgacc
    31861 cacgagcgat agccgaagct caaacgatta gtgaccctcg ttttcaaatt gaacatacgg
    31921 cattttctgc cattcccgaa ctgtgtgaac gaatggggtt ggtgggcaaa attgacggta
    31981 ttttattgga tttaggtgtg tcttccccgc agcttgacga agccgaacga ggctttagtt
    32041 ttatgcgtga cgggccgctt gatatgcgaa tggataccac caaaggctta tcggcagccg
    32101 agtggcttgc ccaagtttcg gcagaagatt tagcttgggt attgaaagaa tttggcgaag
    32161 agcgttttgc caaacggatt gcacaagcgg tcgtttctta caataaatct gcaaatgaaa
    32221 aaatcagccg cactttgcag cttgcgcaaa ttattgcgga tgcggtgccg tttaaagata
    32281 agcacaaaca ccctgcaacc cgttcgttcc aagcaattcg catttttatc aatggtgaat
    32341 tagacgagct ggaaaaagct ttaaattccg cattaacggt gttagcccct gaagggcgtt
    32401 tgtcgattat cagctttcat tctctagaag accgaatggt gaaacagttt gtgcgtaagc
    32461 atagtaaagg aatggacgta ccccgtggtt taccgatttt agaagcagag ctaaccaaaa
    32521 atattccgct gaaaaccatt ggcaaagcga ttatgccgag cgaagccgaa attgaagcaa
    32581 atgcccgctc acgcagtgcg gtattgcgga ttgccgaaaa acgctaacag taaataggga
    32641 agaatatgtc gaacgaacgt tatccgttac atcaaatcat cattgatgat atctttagcc
    32701 ataacaaagt ggctctttta ttgttgattg gtgtagtgat ttcagcagtg gctacgattt
    32761 ggataaccca ccagactcgt ttatcggtga gcgaacaagg gcaactgatt caagcaaacc
    32821 aaaagttgga aagccaatat actaatctgc aattagaaga aaacagcaga agcagtcggg
    32881 caagagttga tgccgccgct aaatcgttcg gattacagcc gattaaaaaa gagcaagaaa
    32941 ttattttagt tgaataaaaa atggttaaat cagttaaatt aaaacgtaag caagaagccc
    33001 ctgtcgcaaa agcagagcct caacaagcag aaggtaaaaa aacaccgagt tttttaccta
    33061 ctcgctttag agtggttgtg ttttttatgc tattaatggt tggtggctta ctagcacaaa
    33121 ccgcctatat tcagcttttt gactctgaaa gattaattaa agaggctaat aaccgctcac
    33181 ttcgtactaa agaactccaa tttacccgtg gacgtatttt agatcgtaac gggcgttttc
    33241 tctctattag tgtgccaatg tactcattaa cacttgaccc gagagaatac tttgatacta
    33301 agctgcgtcg ttctaacgaa agctggcgtg ccttagcgat tgaaatggaa acatcaaaag
    33361 gtaaaattga ggcaaacgtt aataaattta ttgaaaagaa aaatttttca aaagaaaaag
    33421 tagattttga tccacgttct attttaaata ctaaaagtga aggttattgg actcagcttg
    33481 cccaagttac aggtttggat tacaacagtt taatagaaaa agtacggaat aaccctagct
    33541 cggttttttt acgtttagat aacgaaaatt tagtaagaga acgccagaaa ttccaagcgt
    33601 taagcaaaga aatcggccgt tcctataatg acataatgga cgagctttat agcaaaaacc
    33661 gccagcgatt cctttactta tcccgtcatc aatctgaagc gatcagcgaa tatgcaaaag
    33721 aactagatat tgatgcatta gtgattaaag tcgaatcacg ccgtttttac ccgctggcag
    33781 aagaatcttc acagttgatc ggttttactg ataaagatga tatgcacggt tcggaagggc
    33841 tggagcgtag ttttgattcc ttacttatcg gcaaaaacgg taaacaaatt atccgaaaag
    33901 atgccaaagg caatattgtg gaaaatatcc gttcggagaa acagtacgat ccgcaagatg
    33961 ttatgttaag cattgatgaa gaattgcagt ctatggtgta cggtgaaatc aaaaaagcgg
    34021 tacaggaaaa taatgcggaa tcaggcactg cggttttggt tgatgtgcaa accggcgaaa
    34081 ttttggcaat ggcaaatgcc ccttcattca acccaaacaa acgggatagt tttaaacctg
    34141 aattaatgcg taaccgtgct attaccgaca cttttgaacc gggttcaacg gtgaaacctt
    34201 ttaccgtatt aaccgcatta caaaatgggg taacttatcg tgatgaagtt attggcactc
    34261 gcccatttgt cgtcaatgga catacaatta aagacgttgc tccaagggac agccttacgc
    34321 ttaccggcat cttgcaaaaa tccagtaaca tcggggtcag taaattagcc ctcagaatgc
    34381 cggcaaatgc gttagtggat acttacacga aagtcggttt cggtaaagac accggtttag
    34441 gcttgggtga acaacgaggt acgaacggtg atcgcaaacg ttgggcggat attgaacgtg
    34501 ctaccctttc ctatggatac ggtttaaatg tgaccccatt acaacttgcc cgtgcttatg
    34561 cgactttagg aagtttcggg ctgtatcgcc cactttcgat taccaaggtc gatccgccgg
    34621 tgattggcga acgggtgcta ccggaaaaaa ccacccgaga tgtcgtgcat atgatggaaa
    34681 gcgttgcggc taaaggcgaa ggcggacacc gtgcagcggt ggacggctac cgtgtagcca
    34741 tcaaaaccgg tacagcacgc aaattagaaa aaggtaaata tgttgaaaaa tatattgctt
    34801 ataccgcagg gcttgccccg gcaagcgatc ctcgctttgc attagtggta ttaatcaacg
    34861 aacctaaagc aggcaactat tatggtggct ttgtttctgc accactgttc tcacgcatta
    34921 tgggttacac cttaaaacaa cgtaatatta agccggataa cttaacggaa aatacccaaa
    34981 gtgccgtgcg tgaaattaaa ttagaacgcc ctatcaatta aggttagcta tgaaacgttt
    35041 actccctttt ctgacagaac ttgatgcttg ggtggaagaa ctcaccgagc taaaacaaat
    35101 gacacttgat agtcgccaag ttcaagccgg tgatctcttt gttgctttaa aaggacatca
    35161 agtcgatggc agaaaattta ttccgaatgc gatagaacaa ggagcagcaa ttattttggc
    35221 tgaggctgat gaagatcaac cggaaattga gcttgatccg aaatttgcaa aatttaacct
    35281 agatcgcacc gcttgttgca aggttgtctc tgttccacgt ctgccaaaat tgctctctga
    35341 aattgcagga gctctttacc ataacccgtc acacaagctg actttagccg gcattaccgg
    35401 cacgaacggt aaaacgacta ctgctcaatt attagcacaa tggcataatt tattgggtgg
    35461 gaaatcggca gtaatgggta ctatcggcaa cggtttgtac ggacaagtgc aagaagcggt
    35521 aaataccacc ggctctgcca ttgaaattca gcataatctt gcgaactttg ttgaacttgg
    35581 agcggatttt tgtgcgatgg aagtcagctc tcacggtttg gctcaattta gagccgaagc
    35641 cttggatttt gatttagcga tctttacgaa tttaagccga gatcaccttg attaccacaa
    35701 cacgatggaa gagtatgccc aagccaaatt ccgtctcttc aacgaattaa gcaccaaagc
    35761 tcaagtaatt aacgccgatg atgaaatcgg gcgtgaatgg ctgacacaat taccaaatgc
    35821 agttgcggta agcaccgatc cgaagtttgc aggcaaccac caatttgtca aagccactgc
    35881 ggtaaaattt accctacaag gggcaagtat tgcgtttgaa tcaagttggg gcaatggcga
    35941 gttacatagc cgtttaatcg gggctttcaa tgtaaataat ctgcttaccg cctttgccgg
    36001 acttttagct cttggctttg atattcaaga actggttaaa accgccccga atttagttgg
    36061 cgtagcaggt cgaatggaat gcattaccgc tccaaataag ccaatggtaa ttgtggacta
    36121 tgctcacacc cctgatgctc ttgaaaaagc cctacaagcg gctcgtttac attgcgaagg
    36181 cgaactttgg tgcattttcg gctgtggtgg agaccgtgac gccggcaaac gcccattaat
    36241 ggcgacgatt gccgagaaat taaccgataa agtgattgct acagacgaca accctcgcac
    36301 cgaagataat caaaagatta tggcagatat tgtgaaaggt tttagtaaac cccaacaaat
    36361 tatccacaat cgtgaagagg caattaaaac cgccattgag caagctaaag ccacagatgt
    36421 gattctaatc gcaggcaaag gtcacgaaga ttatcagatt attggcacag agaagttaca
    36481 tttttcggat caggaaacgg caaggaaata tctgttttaa tgtcactttc tttgcacaag
    36541 caaagaaaag tgacagtgac aaatacaaaa tgctcgtaat taattttata aagaaaaaga
    36601 taaatcaatg ataaaactaa ccacccaaca aatcgctgaa atcctaaatg ccaaattgat
    36661 cggcaatggc gaaactgtgg tagaaaccac cagcaccgac acccgacaag cggttgaaaa
    36721 cggcttattt tttgcattaa agggcgagaa ctttgatgct catcactatc ttcaaaatgc
    36781 agtcgcacaa ggttgtgtag cggttgtggt tgagcgtgag tgtgaaattg atgtaccaca
    36841 acttgtggtg gcagataccc gtttggcatt gggggaattg gcgaaatggt taaaagctaa
    36901 gctgaacccg aaaacggtag cgatgacagg ttcttccggc aaaacaaccg tcaaagagat
    36961 gacggcaaaa attctgcaaa aaatgaccgc ttgcgaacag gaagtgcttt atacttttgg
    37021 taacttaaac aatgacttag gtgtaccgat gaccttgctt cgcttaaccg aacagcataa
    37081 atatgcggtc attgagctgg gggcaaatca tatcggtgaa atcgcttata ccaccgctat
    37141 cgctcagcct gatgcctgct tggtgaataa tgtggctgcg gcgcatttag aggggtttgg
    37201 ttcattagca ggcgtggcac aagccaaggg cgaaatttat cgtggcttga aagaaaatgg
    37261 caaagcgatt gtcaatttag ctttttatta tccgcaatgg caaaaagaga ttggctcacg
    37321 ggaaatgcaa tctttctctt atatcgggtc agattcggat tcttacgcag attactgggc
    37381 ggaagatgta gaactgcatt taagcggttc acgctttacg ctacataccc cacagggcga
    37441 aattgctatt gatctgcctt atttgggcaa acataacgtg agcaatgcct tagcggcaac
    37501 ttcgctggcg atgtctgttg gggcaacgct agaagcagtt aaggcagggc ttgagcagcg
    37561 ttcaatggta aaagggcgtt tgtatccggt gcaaattaac gaccactgtt tgtttattga
    37621 tgacacttac aacgccaatg tggattcaat gaaatcggcg atttctgttt tggaaaatta
    37681 tccggcttat cgtatttttg cagtgggtga tatggcggaa ttgggtgaag aaagtagcaa
    37741 atgccaccaa gaagtagcgg attttgccaa aaatgcagca ttagatttaa tcgtgagctt
    37801 tggaaaagaa agtgcggtaa tcagccaaca ggcagaacat cattttaccg ataaacagca
    37861 aatggttgat ttcctactgc cgattatttt gcaaaaaatc gaacaaaaac aaccgcttgt
    37921 attattggca aaaggctctc gtagccagaa aatggaaacc gtgatttccg aattgtgtaa
    37981 accgtttaac ctaaatttct aattattttt aaggactaag caatgttagt ttggcttgca
    38041 gaactattgg ttcaatataa cacagcgttt aacgttgtct cttatattac tttccgtgcc
    38101 attatggcgt tattaactgc aatgggaatc gggctttgga tcgggccgaa agtaattcgc
    38161 cgtttgcaga tcttaaaatt tggtcaggaa gtgcgtaatg acggaccgga aagccatttc
    38221 aaaaaacgtg gtacgccaac aatgggcgga gtgatgattc tcgcagcgat tggggtgagt
    38281 acattgcttt gggcagatct gcgtaattcc tatgtttggt tcacgctgtt tgtgctattt
    38341 ggctacggtg cagtgggctt tgttgatgat tatcgtaaga tctctcgtaa aaataccgat
    38401 ggtttgattg cccgttggaa atatttttgg ttatctgcta tcgcattagt ggcggtgttt
    38461 ggtatgtatg cggtgggtaa agataccgct gcaacacaat tagtcgtgcc gttttttaaa
    38521 gatgtgatgc cgcaactcgg tttattttat attgtgttat cctatttcgt gattgtcggc
    38581 accagtaatg cggtaaacct aacggacggc ttagacgggc ttgcgattgt gccaactatt
    38641 atggtcgcat ctgcctttgc gttaattgcg tgggcaaccg gtaactttaa ttttgcacaa
    38701 tatttacata ttccttttat tccaaatgcc ggtgaattgg ttattttatg tactgcgatt
    38761 gtgggagcag gtttagggtt cttatggtat aacacctacc ctgcacaggt gtttatgggc
    38821 gatgttggct cactttcgct cggcggtgca ttaggcgtga ttgcagtatt agttcgccaa
    38881 gaattattat tggtggtaat gggcggtgta tttgtggttg aagccctctc ggtgatttta
    38941 caagtaggtt catacaaatt acgccaaaaa cgtattttcc gaatggctcc aattcaccac
    39001 cattttgaac tcaaaggctg gtctgaacca cgggttatcg tgcgtttctg gattatcacg
    39061 ctaatgctgg ttttagtcgg cttagtaaca ttgaaattac gttaattgat tgaataaggt
    39121 gcattgagat aatgtacctt atgttatttt taaattacag aataaattat gcaaaaacaa
    39181 tacgaaaaca aaaccgttac tattatcggc ttaggtacaa cagggttatc ttgtgtggat
    39241 ttctttaaga aaaaaaatgc caatatccaa gtgattgaca cccgagcaaa cccagccgga
    39301 gcggataaat tggacgtaac tattccgttg cataccggtg ggttaaacag tgaatggttg
    39361 ctgaaatctg atcttattgt aattagccca ggtttagccg ttgccacacc tgaaattcag
    39421 caagcgattc aagctggtgt tgaaatagtc ggtgatgttg aactgttttg tcgggaagcg
    39481 aaagctccga ttattgcgat caccggttca aacggcaaaa gtaccgtaac gactttaact
    39541 accgaaatgg cgaagcaagc ggggattaaa gtgggaatgg gtggcaacat cggtgtgccg
    39601 gtattaagtt tgctggaggg cgattatgac ctttttgtgc tggagctatc cagcttccag
    39661 cttgagacaa cttattcact gaaagcaaaa gctgccactg ttttaaatat tagcgaagat
    39721 catatggatc gctacgattc gattgccgac tatcgccaag cgaaattgcg gatttacgat
    39781 aatgcggaaa atatcatcgt aaacggtgaa gatgcccaaa cttacccgat acaagcggtc
    39841 aaaaaagtga ttcgttttgc agaacaaaat gcggaatata gcctacgcaa tcagatgctt
    39901 tattcaggcg atgatgcaat tatccaaact aaacagatgc tgattagcgg ccgtcataat
    39961 gagatgaatg cgttagcggc gatggcatta gcagaagcgg cgaatgttcc tcgtgaaggc
    40021 attgtgaaag ctttgcaaat ttatggtggt ttgccacacc gtttccaagc ggtggcaacc
    40081 aatgatggcg tgcgttgggt caatgattcc aaagcgacca atgtgggtag cacggtagcg
    40141 gcattaaacg gcttgaatat tgccggtaca ctttatttac ttttaggtgg tgacggcaag
    40201 gctgcggatt tttccgaact caaaccatta attaataagc caaatattgt ctgctattgt
    40261 ttcgggcaag atggagcggc attggcagaa ttaagcgaac aaagtgtgtt ggttgaaacg
    40321 atgcagcaag caattgaagc aatccgccca caactgaaaa aaggcgatat ggtactgctt
    40381 tctccggctt gtgccagttt agatcagttt aaaaactttg agcaacgtgg cgaggtattt
    40441 atggcattag cacaaggaca gcacgcataa tgttagaaag aattaagtcg gaatgggata
    40501 aatgggtcag attaacccct tctaattcac tttatgacag aactctaatt tggctatttt
    40561 taggcctgct aattatcggt tttgtgatgg taacatctgc ttcactccca gttagcacaa
    40621 ggttgaataa cgatccattt tattttgcga ttcgagacgg gctgtatatt attgcttcaa
    40681 ttatcttttg ttatgttttt gtacaaatcc caattgaaaa atgggaaaag cataacttgg
    40741 cactgttttt tatttcaatc ggttttttaa tcgccgtact cattttcggc cgctcaatta
    40801 atggtgcagt gcgttggatt ccgttgggta ttctcaactt tcagccggca gaattagcca
    40861 aattagcggt catttgctat tttgccagtt tctatgtacg taaatatgat gaaattcgta
    40921 aagaaaaagc cagtttctgg cgaccggcag tgattttatt cttattcggc ttcttgctga
    40981 ttttgcagcc ggatttaggt agtacctttg tattatttgt tctcactttc tcaatgcttt
    41041 tcattgtggg ggcaaaaatt atgcaattta tgtttttagg cgtggtggga acggtgttat
    41101 ttgcggtgtt gattttaacc tcggaatacc gtttaaaacg tgttacctcc tttatggatc
    41161 cgtttgctga tgcttatggc gacggtttcc agctctcgaa ctcacaaatg gcatttggac
    41221 aaggtgaatt ttggggacaa ggtttaggta attcggtaca aaagctagaa tatttgccag
    41281 aggcacatac tgactttgta atggcggtta ttggtgaaga atttggtttc tttggtattg
    41341 cttgcatcgt acttttactt attctattaa cggtgagagc cttaaaaatc agtaaagaat
    41401 ctttggtgct ggaagagcgt tttaaaggct atatggcatt tgggattgcg atttgggttt
    41461 tcctacaagg cttcgtaaac ttaggggtgg catcaggttt gctgccaacg aagggcttaa
    41521 ccttcccatt agtgagttat ggtggttcga gtttggtaat tatgtcgatt gcgattgcag
    41581 ttttgctacg aattgaccac gaaaaccgtg ccgagcgaat cgggcacgca aaaattaaaa
    41641 ccatctagcc gagcggtctg caacgttaca atttgcaaaa ttttacaaaa atgagaccgc
    41701 ttgtattagc tggaaagcat aaaaattcag taaaatagca cgttttagaa taaaaaagag
    41761 ttgaaaatgg cgaagaaatt attagtaatg gcaggtggaa caggggggca cgttttccct
    41821 gcaattgccg tagctcgaga gctacaaaaa caaggctggc aaatccgctg gctggggacg
    41881 aaagaccgaa tggaagccac tcttgtgccg aaacacggta ttgagattga ttttattgaa
    41941 atctcaggct tgcggggtaa aggcgttgca gcattgttga aagcaccgtt tgctattttt
    42001 aaagcggtga tgcaagcccg caaaatcatt aaaaattatc agcctgatgc ggtgttggga
    42061 atgggcggtt atgtgtccgg tccgggcggt attgcggcta aattatgtgg cgtgccggtg
    42121 attttacacg agcaaaacgc agttgccggc ctaaccaatg tgtggctatc caaaattgcc
    42181 cgcaaggtgt tacaggcttt ccctactgct tttaaagagg ccgaagtagt aggtaatcct
    42241 gtacgtgaag atttatctgc tcttccgctg ccgaatgaac gtttcgccaa acgaggctac
    42301 ccgattaaca ttttagtaat gggtggcagc caaggggcaa gagtgatcaa ccaaaccgtg
    42361 ccggaagtgg caaaagtgtt gggtaataat gtgtttatca gccaccaagt cggtaaaggt
    42421 aatttagccg gtatcgaaga agtctatcaa caaaccggca atgggattgc ttccgagttt
    42481 attgatgata tgaaagccgc gtatgagtgg gcagatttgg tgatttgtcg ttccggtgcg
    42541 ttaacggtgt gtgaaattgc cgccgtaggt ctgcccgctg tgtttgtgcc gttccaacat
    42601 aaagacaggc aacaattttt aaacgctaac tatttggcgg cagatggagc agcagtgatt
    42661 atcgaacaga gcgatttcac tccaaaggca ttacagcaag ccttagaacc cttaattgcc
    42721 aatcgccaac tcttattgga tatgtcaatg cgagccagag caaaatccac cccaatggca
    42781 gcaaaacgtg tagcggaagt gattattcaa gaagcgaatt aacttactac aagcggtcgt
    42841 ttttggtaaa aattttgcaa aatgtaaccg cttgcgaata gattaaaagg acaataaatg
    42901 aaaaatttcc aagataaagt caaaaaatta gtgcctgaaa tgcgtcgtgt cagccaaatt
    42961 cattttatcg ggattggcgg agccggtatg agcggcattg cggaagtgtt attaaacgag
    43021 ggataccaaa tttcaggttc ggatattgca gacagagcgg ttacacaacg tctatccgca
    43081 gccggagcga aagtctttat cggacaccaa gcagaaaata ttgctggggc gagtgtggtg
    43141 gtggtttcta ctgcgattga tgaaaccaac cctgaaatta ttgccgctcg agaagctcga
    43201 attccggtga ttcgccgagc agaaatgctt gccgaaatta tgcgttttcg ccacggcatt
    43261 gcgattgcag gcacacacgg taaaaccact acaaccgcaa tgatttcaat gatctacacc
    43321 gaagcaaaat tagatccgac tttcgtgaat ggcggtttgg taaaatctac cggcaaaaat
    43381 gctcatttgg gggcgagccg ttatttaatt gccgaagccg atgagagtga tgcttctttc
    43441 ttgcacttgc agccaatggt gtcggtagta accaacattg agcctgacca tatggacacc
    43501 tatggtggcg attttgagaa aatgaaagag acttacgtac gatttttgcg taacttacct
    43561 ttctacggct tagcggtaat gtgtgccgat gatgaaacgg taatggaaat tgctcctcgt
    43621 gtcggcagac aagtgattac ctatggcttt agcgaaaatg cggattaccg aattgaagat
    43681 taccagcaaa ccggcttcca agagcattac accgtagttt gcccaagcgg tgaacgaatt
    43741 gatgtgctgt tgaatgtgcc gggtatgcac aatgccttaa atgcaaccgc tgcgttagcg
    43801 gtggcaaaag aagaagggat tggcaatgag gcgattttag ctgctttagc tgatttccaa
    43861 ggggcaggac gccgctttga ccaattaggt tcatttattc gcccgaacgg caaaattatg
    43921 ttagttgatg actacggcca ccacccaact gaagttgatg taaccattca agccgctcgt
    43981 tcaggctggg aaggtaaacg tgttgtgatg attttccaac cgcaccgcta ttctcgtacc
    44041 cgtgatttat tcgatgaatt tgtacaagta ctgtctaaag tcgatgcctt gattttattg
    44101 gatgtgtatg ctgccggcga agctccgatt gtgggggcag acagtaaagc cttagcccgt
    44161 tcaatccgta atttaggtaa ggtcgatccg attttggttt cagataccga tcaacttggc
    44221 gaggtattag atcaaattat tcaagacggt gatttaattt tggcacaagg tgcgggcagt
    44281 gtaagccgca tttctcgtgg cttggctgag agctggaaaa attaaatact ctctcccctt
    44341 gcgggagaga gaccgaaaaa tacttcgttc agaagtattt ttcagagaga gggtatatat
    44401 ttaaaggatt tcaaatgagt attaaaaacg aaaaaattgc cgtcttattc ggtggcgttt
    44461 cgcaagagcg tgaagtttca ctgaattctg gtgcagcggt aacagctgca ttaaaaagtt
    44521 taggctataa cgtagaaggc attgatacta aagaattccc gattgaaaaa ttaaaagaaa
    44581 aagggattca gcgtgtattt aatattttac acggcggtat tggcgaaaat ggcgtactgc
    44641 aaggtgcgtt agagcaaatg ggtattcctt acaccggttg tggcgtaatg gcatcagcag
    44701 tgacgctgga taaattccgg actaaattat tatggaatgc agtaggttta ccaacagcgg
    44761 atatggtggt ggttcagcgt ggacaagcgg tcgattttga ccaaattatt gcaaaattag
    44821 gcttaccggt atttgtgaag tcttcgtgtg aaggctcaag tgtgggtgta ttcaaagtaa
    44881 aaaccaaaga agaattggca ccggcaattc acgaggcatt aaagtttgat tccattgtgt
    44941 tggtggaaga atttttagcc ggtaatgaat attctgtacc ggtattagac ggacaagttc
    45001 taccggcggt acaagtaatt ccggacggcg aattttatga ctaccacgca aaatatgtgt
    45061 cggataacac ccaatatgta gtaccggcat taaatgacga acgccaagca gaggtcgcca
    45121 aattagtgaa agcggcttac gatgtggttg gctgtcgagg ttggagccgt attgatgtga
    45181 tggaagatgg cgaaggaaaa ttccgcttgg ttgaagtaaa taccaacccg ggaatgacca
    45241 gtcacagtat tttcccaaaa tcagcagcaa cagttggtat ttcctttgaa aaattagttg
    45301 aacgcgtatt ggagttaagt gcttaatggg catcttccgc aagaagaaca gcacaaatgt
    45361 gcgtttgaat gttcttaatc caaaaacacc tgtttctcca cgtaaatggc tagtattcat
    45421 taagccatta attgtgttat tatgtacact atttgtattc ggtgtgtata gtaattggca
    45481 aaatatactc gaaagttggg ataaaacacc gattcgcgct tatgcattaa cacataaaac
    45541 acaatttaca acaaatgcag atattcgtga aactttgtct aaagaacctg ctctaaaagg
    45601 atatttcgga caaaatattc aagaggtcaa agataagctt ttatctatac cttgggttaa
    45661 agatgtggct gttcgtaaac tttatcccga ccgattaagt attactttgc tagaacataa
    45721 acccgttgca atttggaatg atactaactt tgtctcagaa caaggaaccg tctttagttt
    45781 accgaaagac agaatcgata aaaatggact tccattactc tatggtccag atacggaagg
    45841 aaaaagtgta ttagaggcat ggaataaaat ccgagctgat ctaaatgccc gcaacttgga
    45901 tttaacctcc gtttctgtag ataatcgagg ttcttggaca attaggcttt ctaatcaagt
    45961 agaattaaga ttaggaagag gggaatggac ttctaaaatt gatcgttttg taacaatctt
    46021 tcctgaaatt catatacctg aaggtaatag attagcttat gttgatttac gttatccaca
    46081 tggcgcggcg gttggattta gtcctataaa aaattaaact cagtgaacac aaaaacatta
    46141 tgacaaaagc agtagaatca aaaattatcg ttggtcttga cattgggaca tcaaaggttg
    46201 ttgccgttgt tggtgaagta ttacctgatg gtgtaattaa tgttatggga gctggcgttt
    46261 gcccttctaa aggagtcgat cgaggtggcg ttattgatct tgacgctgcc gttaattcta
    46321 ttcaaagagc cattgagcag gcggaatcta ttgccgattg tcaaattatg ggtgtaacac
    46381 tggcaatctc aggtcagcat attgttggtt taaatgaagc aggatcatca acattatctg
    46441 gaggtattgt tacccaagat aatattgaaa gtgctgtgga tatggcaaag gcaattaaat
    46501 tacaagatgg cttagaaaca ttacacatga ttccacaaga atatcacgtg gatagattgc
    46561 ctgcgactaa aaatccaatt ggcttatcgg gtatgcgttt acaagttcaa gcacacttaa
    46621 ttgcttgcca tcaagcttgg ttaaaaaact taaaaaatgc ggttgaacat gctaaattaa
    46681 aagtcgatca agttgtattt tcaggtcttg cctctagcta ttctgtttta actgaagatg
    46741 aaaaagagct gggtgtttgc ttaattgata ttggtggcgg tacgatggat gtactagttt
    46801 ataccgatgg agcattaaga tacagtaaag tcattccatt tgcaggtaat aacattactg
    46861 attatttggc tcgtgtattt acgacatctc gccctgaagc tgaaagcctt aaagtaggtt
    46921 atggtagcgc aatttcgcct ccaacccata attcagataa aaaaattgag gtggcaggac
    46981 taggtggacg gatggcaaga acctttaccc gagctcaggt ggcaacggtt acctcacaat
    47041 gttataacga tttgctaaaa gttgttgaag aggaattaac ccaattacgc catgaacttt
    47101 tccaaaaagg aataaaacaa gagttaattg ccggtgtagt cattactggt ggtggctcac
    47161 aaattgaaga tattgtagaa tgtgctaaat caatttttgg ttcacaagtt cgtgttggat
    47221 atccactcaa tattactggc ttaaccgatt atgtgaataa accacaatat gcaacagcat
    47281 tagggctttt acaatatagc cactataatt atactgaaca aggtacaagt acagattcta
    47341 atgaagatat ctttgctcct attggtcgtg gaaccaagaa aatcattgac ttcttcaaat
    47401 caaaatttta atagtgttaa aataaacacg cagggagata aaaatgtttg aacctattat
    47461 tgaacaaacg caagatgcta tcattaaggt agtgggtgtt ggtggcggtg gcggtaatgc
    47521 cgtagacaga atgtctcgct ctgccgatga tattaaaggt gttgaattct ttgatgtaaa
    47581 tactgatgct caagttttaa gaaaaagaac cacacgccaa actatccaaa ttggagcaag
    47641 tacaactaaa ggtttaggtg caggtgctga tccaatggta ggaaaacaag ctgccgaaga
    47701 agatcgtgag gctatcgcta atgcattaaa aggtgcaaat atgaccttta ttgctgttgg
    47761 tatgggtgga ggtaccggta ccggagcagc ccctgttgtt gctcaaattg ccaaagagca
    47821 aggctcacta actgtaggcg ttgtaacaaa acctttccgc ttcgaagggc ctcgccgtat
    47881 gcgctttgca gaccaaggca ttaaagagct ttctcaatat gttgattctc ttattataat
    47941 tcctaatgat aaattacgtg gtttaggtaa gcaaacaaca gcagtagatg cctttgccgc
    48001 agcaaatgat gttttaagta actgtgtgct tggtattacc aatatgatta ccagttcggg
    48061 cggttctacc ggtgcagata ttaacgtgga cttcgcggat gttcgtacag taatgtctgg
    48121 taagggacac gctatgattg gtacaggttt tgctgaaggt gaagttggtg aaggacgagc
    48181 ggaaaaagca atgaatgatg ccatttctag tccattactt gaaaatgtgg atatttcagg
    48241 tgcaagtggt atgctcatca acattagtgc tgggacagat ttcttattag aagaagttta
    48301 tgctatgatg gacttaattt atggctttgc aacagaagat gccgcaattg tatttggttg
    48361 taactattac cctgaaatgg atggaaaagt gagtgtcact cttgtcgcaa caggaatagg
    48421 ccaacctgag gaagctctac atatgccaca taaggctcag ccagtatatg cacagcaagg
    48481 aaatcatgtt caagctacac agcctactca gccaaaccat gcggtacaac aaccaaactt
    48541 tactcaaccg tcaagttatg gtcagccaaa tcaatttagt ggtcaaccac aaccactaca
    48601 acaacctgtg gctccaaaac cacaatcggt tgatacagca caaattttta acccaaattc
    48661 aattccgggt tttatgagaa atagtcaata acttccactc atttcggaag taaggacaaa
    48721 atatgactaa acaaagaaca ttaaaacaag cagcaaaagt aacaggtatt ggcttacata
    48781 gcggcaaaaa agtaacctta acgttacgcc ctgccccagc taatacagga gttatttatg
    48841 cccgtaccga tttagagcct gtcgtttatt tccctgcaag cgcagactct attcgtgata
    48901 cacaattatg cacatgtatg gtaaatgatg atggtgttcg tatttcaaca gtagaacatt
    48961 taaacgcagc aatgtcagca ttaggcttag ataatgttat tgttgaagta gatgcacctg
    49021 aaattccgat tatggacggt agttcaagcc catttatcta tcttttatta gatgccggca
    49081 tcgaagaaca agatgcaccg aagaaattta ttcgcattaa agaaacagta cgcgttgaag
    49141 aaggcgataa atgggccgaa ttaaaaccat acaataaagg ttttaaattg aacttcacta
    49201 ttgactttga gcacccatta atccccaaaa atgtagggag ctattccatt gatttttctg
    49261 ctgagaactt tattcagcaa ctaagtcgag cgagaacctt tacatttatg aaggatgtag
    49321 aatacttgca atctattggt cttgcattag gtggaagcct tgataatgct attgtattag
    49381 atgattaccg aattctaaat gaagacggtt tacgatttaa agatgaactg gttcgccata
    49441 aaatgctgga ttcgataggt gacttatata tgtgtggtta taatatccta ggtgaattta
    49501 gtgcatataa atcaggtcat ggcgttaata ataaattatt aagagctgta ttggaaaata
    49561 aaaacgcttg ggagtttgtt acctttgaag ataaagcaga agtcccacaa ggttaccaag
    49621 tacaacaaga aatttttatt tagtctaaat ggcttaaaag acgaacagaa atgttcgtct
    49681 tttattttgc aaattttttc taatatttaa ccgcttgcaa cccgcctcat tagcgatttt
    49741 ttcgccctta tctatttact gtttaaaaaa acagttgtac tatataccca tacagttaat
    49801 cttgtgtggt gtattatgct tactcaactt actattaata attttgcgat tgttcgccat
    49861 cttattcttg aattaaatga aggtatgtct gttattaccg gtgaaaccgg tgccgggaaa
    49921 tcaatcgcta ttgatgcctt agggctatgc ttgggttatc gttctgaaag tgggatgatt
    49981 agaaacggtt cggacaaagc agatataagt gcaaccttta ctatgcagcc acatagccct
    50041 gcttatttat ggctacaaga gcatgaactg cttgatgaag ataatcctca agagtgtatc
    50101 ttacgccgta tgattaatat tgatggacgc tcaaaagcct ttgtaaataa ccgatcatta
    50161 cctgtttcac aacttcgaga gttggggcaa tatcttattc atttaaatgg gcaacacgca
    50221 ccacaattac tcctaaaaaa cgaatatcaa cttgaaatag tcgatcatta tgccacgtta
    50281 cagcctctat tgatgaagat ggcaaagcaa tatgggaatt ggaaagaact gaataagcag
    50341 gtaaaaaatt tccaaaaaca gtgccaagaa aatgaagctc gcaaacagct attagaatat
    50401 caagttgagg aattagatga atttgcaatt aaagcaaacg aatttgaaga aatggaagag
    50461 aaatacaata tcttgtcttc ttccgaggag cttactgagc tttcagatga aatcacacgc
    50521 ttattaagtg atgatgaaat caatgcaaac agtctgattt ataaagcgtt acgcaatgca
    50581 gaaaacttgg ctgaggttga tagccaatat cagggcattt tagatatgct taatgaggcc
    50641 ctgattcaga ttcaagaagc aagctccgaa gtggctcaat tagccagtaa aattgaacaa
    50701 gatccggaat tactacagga gctggataat agaattgcac aaactatatc gttagcacgc
    50761 aaacaccata ttcaaccgaa tgaattatgg caatatcacg cgacattaaa agcagaacta
    50821 caggaattac tggattttga agataatgaa gaacaactca ttcaaaatga aaaacaagct
    50881 taccaagagt gtataacatt agcagaagaa atttaccaaa aacgtctaga tgccacacat
    50941 aagctctctg aacaagtaac aaaacaaatt aaacacttag caatggaaaa cggtgagttc
    51001 tttattcata tagaacataa tcttgaaaaa atgtctgcaa atggtgctga ctatgtcgag
    51061 tttaatttac gcagcaattt aggacaacaa ccccaaccac tggcaaaaat tgcttctggt
    51121 ggtgagctat ctcgcatttc tctggcagta caagtgctta ccgcaaataa actttctacg
    51181 ccaactatta tttttgatga agttgatgtt gggattagtg gctctgctgc cactacagtc
    51241 ggaaagctac tgcgtaagct aggcgaaaaa tgccaagtat tatgtgtaac ccatttacct
    51301 caagtggcaa gttacggcaa ccagcagttt aatgtacaaa aatatgtaga aaataatcaa
    51361 actgaaacgc aaatgacatt actcacagaa gcagagcgta ttcacgcctt ggctcgacta
    51421 ttaggcggaa gcgaaatcac cgaaacggtt ttagctaatg caaaagaaat gctaaattta
    51481 gcgaaaaata acgaatagcc aaaaagaaaa atcgcatcaa tgaatattga tgcgattatg
    51541 aatttggtgg aggtaaacgg gatcgaaccg atgacctctt gcatgccatg caagcgctct
    51601 cccaactgag ctataccccc ttaatacaag cggaataata tgctttccgc ttgaagatgt
    51661 caatggcttt aatcaagcaa ggtgttgatt gattaaaaac tagctattcg cctgaataaa
    51721 ctcaatcgct ttttgtaagc gagctaaggt tctttcttta ccgactaatt tggcggtgat
    51781 atccattgac ggcgattgcc cacttcctgt taccgctaaa cggaacggca taccgacttt
    51841 gcccatacca atttccagct cggcagcggt ttggttcatt gcctcgtgga tattttccac
    51901 cgtccagtca ttgcaagcgg tcaatttttc caataatttt gcaagtggag caacggcttc
    51961 ggctttgaag tttttagcag cagctttttc gtcgtaagcc ttaaattctt gatagaaata
    52021 gcggctgctt tcggcaagct cttttaaggt tttgcaacgt tcgcccagta cagggataat
    52081 ttcttccaat tttggaccgc ttgtgaaatc aatgccttga gtttgcatat gccattcaag
    52141 atgttttgcc acataacttg gggcaagact gcggatatag tgttggttca accattgtaa
    52201 tttttcagtg ttaaatgcac ttgccgattt actgactgaa tgaatgtcga acagctcgat
    52261 catttcgtca cgagagaaaa tctcttggtc gccgtgtccc cagcctaaac gcacaaggta
    52321 gttaattaag gcttccggta gatagccgtc atcacgatat tgcattacgc tcaccgcacc
    52381 gtggcgtttg gagagttttt gcccgtcatc gccgttgatc attgaaacgt gggcgtaggt
    52441 tgggattggt gctcctaatg ctttcaaaat gttgatttgg cgtggtgtat tgttgatatg
    52501 gtcttcaccc cgcacaacgt gagtaatgcc catatcccag tcgtccacca ccacacagaa
    52561 attgtaggtc ggcgagccgt cagtacggcg aataatcaag tcatctaatt cgctattggc
    52621 gatttcaatt cgcccacgca ccgcatcgtc aaatactacc gagccttcgg tcgggttttt
    52681 gaaacgcaca acatgtggtt ggctcgggtc gttttgcgga ttgtgtaagc agtgctgatc
    52741 gtatttcgct ttctctttat ttgcttcttg ctctgcacgt acttcgtcta aacgttcttt
    52801 cgagcagtag caacggtatg ccgtgccggc ttctaacatt tggtcgatca cttggttata
    52861 gcgatcgaaa cgcttggttt gaaagtatgg gccgtgttcc cacgccaaat ccagccattc
    52921 cataccctct aaaatagcgg cggttgcctc aggggttgag cgttcaagat cggtatcttc
    52981 aatacgtaac acaaattcac catcattatg cttagcatat aaccaagagt agagcgcggt
    53041 cctcgcccca cctacgtgca agtagccagt tgggctaggt gcaaaacggg tacggacttt
    53101 tacattcgga tctaagggga aaagggtttc aattttcatt ttatattgcc taattgatga
    53161 ttcttaagaa aaacttgtct attttactac gcttgagggt gaatcatagt aaaaaattaa
    53221 atttgcgggg taaaaaatca gcaaacgggg taaaaagaac aaaaagggtt tgacgaaaca
    53281 gcaaaaatct ctataattca cttccacaac a
//
LOCUS       DANLZQ010000005        49671 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.005, whole genome shotgun sequence.
ACCESSION   DANLZQ010000005 DANLZQ010000000
VERSION     DANLZQ010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 49671)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 49671)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..49671
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.005"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            8..2307
                     /locus_tag="PXE50_000250"
                     /pseudo
     CDS             8..2307
                     /locus_tag="PXE50_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005759321.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            complement(2385..3086)
                     /locus_tag="PXE50_000251"
     CDS             complement(2385..3086)
                     /locus_tag="PXE50_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HDL5621192.1"
                     /translation="MDLQNRENFLNKLAQRMGRPRQNVPEPIPVLENNHAITRLTDRP
                     QPQLCQEFIDFARVMMADVVEAKEADLPQAIIDICEKYGGASVIVNNDQRLKDLGITA
                     AIQAKYEDSYVWDFNQAETNFEKARTANIGVVYGEYGLAESGGIVLFSDKEFGRSVSL
                     LPEKSVVVLRKSTVLPRVAQLAQILHEKAQRGERMPSCVNIISGPSATADIELIKVVG
                     VHGPVNKIYLVIDDL"
     gene            complement(3091..4500)
                     /locus_tag="PXE50_000252"
     CDS             complement(3091..4500)
                     /locus_tag="PXE50_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HDL5621193.1"
                     /translation="MSYLQTNTLPFKQRVEQQVNNEIVRKALVKAQETIGANRQRMVD
                     ELGNWEEWRDDAKAIRNHVLANLDAYLYQLSEKVTQNGGHVFFAETAEEATDYIKNVA
                     KAKNAKKIVKSKSMVTEEIGMNHVLEAEGIKVVETDLGEYLLQIVGDKPSHIVVPAIH
                     KDRHRIRQEMHDVLGYQGSETPEEMTAFVRQKIREDFLEADIGISGCNFAVPETGSVC
                     LVTNEGNLRMATTVPKTHIAVMGMERIAPTFKEVDVLITMLARSAVGAKLTAYNTWLT
                     GPRLEGETDGPEEFHLVIVDNGRSKILESEFQEVLRCIRCGACLNTCPAYRQIGGHGY
                     GSIYPGPIGSVISPLLGGYEEFKELPYACSLCTACNSVCPVKIPLAQLILKHREKIAD
                     AGLTPMAERLSIFGFNFANSHPTLWKVGVKVGAKVASKLIKNGKAPVNFGALGEWTKA
                     RDLPTAEGESFREWFNNRG"
     gene            complement(4502..5233)
                     /locus_tag="PXE50_000253"
     CDS             complement(4502..5233)
                     /locus_tag="PXE50_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HDL5621194.1"
                     /translation="MNVNFYVTCIADVMKAGVAKNTVLLLEKLGCKITFLEKQGCCGQ
                     PAINSGYTKQALAGMKNLVETFEANDYPIVAPAGSCVYAIKTYPDHFERFGEKEWAER
                     AKKVADRFYDLTDFIVNKLGVKDVGAYLPGKAVYHPSCSLFRKLGIKDEPIALLQHVK
                     GLELLPIKNQETCCGFGGTFSVKMAEISGEMVKEKVANVDTDEPDYLIGADVSCLMNI
                     GGRLSREGKPIKVMHIAEVLMQGGK"
     gene            complement(5377..6981)
                     /locus_tag="PXE50_000254"
     CDS             complement(5377..6981)
                     /locus_tag="PXE50_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005818537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HDL5621195.1"
                     /translation="MALFLSVFPIVLLIYLMVKRNALPSYVALPLTALLIFVLQLTYF
                     GNDTTLIFANIIAGLGDVLTPITVIFGAILFNRFSEVSGATNTMRKWLGTINPNPVAQ
                     LMIIGWAFAFMIEGASGFGTPAAIAAPILVGLGFKPLQVAMLALVMNSVPVSFGAVGT
                     PTWFGMGPLLKDGLLTDAQVLEIGSITALIHSIAAFIIPVMALRLIVSWKEIRQNIVF
                     IYISIFACVIPYFIIAQFNYEFPSLVAGAIGLLVSVWVANMGIGLAKSENHLDGDKAT
                     FGEVAKALLPTGLLIFILVITRIQQLPLKAMLNDATAWIVSSLGFANFEISQGLIFAL
                     KNILGTNVATSYKLLYVPALIPFVVTVLICLPIFSVSGKNTQEIFGTSFKQVKKPFLA
                     LLGAIVMVKLMLIGGVDSMVQIIGKNFAEFTGQSWTLFASFLGAIGAFFSGSNTVSNL
                     TFGTVQYATAQQVGLSVTLILALQSVGGAMGNMVCINNIVAVCSVTGIEKQEGNIIKK
                     TAVPMFVYGVIAAISALFIVPMFYNL"
     gene            complement(7271..8362)
                     /gene="ychF"
                     /locus_tag="PXE50_000255"
     CDS             complement(7271..8362)
                     /gene="ychF"
                     /locus_tag="PXE50_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001538644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HDL5621196.1"
                     /translation="MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVV
                     PMPDPRLDALAEIVKPERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGH
                     VVRCFENDDIVHVAGKIDPADDIEIINTELALADLDSCERAIQRLQKRAKGGDKDAKF
                     ELSIMEKILPVLENAGMIRSVDLDKDELHAIKGYNFLTLKPTMYIANVNEDGFENNPY
                     LDRVREIAEKEGAVVVPVCAAIESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYRL
                     LNLQTYFTAGVKEVRAWTVSVGATAPKAAAVIHTDFEKGFIRAEVIAYQDFIDNKGEA
                     GAKEAGKWRLEGKDYIVQDGDVMHFRFNV"
     gene            complement(8548..9135)
                     /gene="pth"
                     /locus_tag="PXE50_000256"
     CDS             complement(8548..9135)
                     /gene="pth"
                     /locus_tag="PXE50_000256"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HDL5621197.1"
                     /translation="MSEIKLIVGLANPGVKYEETRHNAGEWLINELARIYNVSLKEEP
                     KYFGKVAKINTAQGEVRLLVPTTFMNLSGKAVGALANFYRIKPEEILVAHDELDLPPG
                     SVKLKKGGGHGGHNGLKDIIAALGNNKEFYRVRIGIGHPGHKDLVANYVLGKPSPSDQ
                     TLLNSAVDEAARCVEVLFKDGMVKATNRLNSFKAN"
     gene            complement(9208..10083)
                     /locus_tag="PXE50_000257"
     CDS             complement(9208..10083)
                     /locus_tag="PXE50_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HDL5621198.1"
                     /translation="MMKKFIPVMIAALVLSACSSQPAKRKSTPRIKATAAYIPTENSA
                     YVVFDLNQKKFLEGKNFNLVRPIASVTKLMTAVVFLEENRYGASCQTQILPSDADFLK
                     GTTSPLPKNLNIACSELLKAMLVRSDNYAAHALAHATHLNKAQFLARMNSKAREIGMT
                     QTYFGDSSGLSSDNVSTVVDLAKLAGYAASKPEIQQLSNSPLVSVYAGGRYFSMKNTN
                     SMVRSQSYQALVSKTGYTREAGYNLAFIAKGDCRGKRIGVVSLNNDNAASRTDFTESM
                     LAKYQCVPNPYRQYD"
     gene            10305..11885
                     /gene="prfC"
                     /locus_tag="PXE50_000258"
     CDS             10305..11885
                     /gene="prfC"
                     /locus_tag="PXE50_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014326123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HDL5621199.1"
                     /translation="MSYPQEVNKRRTFAIISHPDAGKTTITEKVLLYGNAIQTAGSVK
                     GKGSAQHAKSDWMEMEKQRGISITTSVMQFPYNDCLVNLLDTPGHEDFSEDTYRTLTA
                     VDSCLMVIDSAKGVEERTIKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVESVLK
                     IKCAPITWPIGCGKLFKGVYHLYKDETYLYQTGQGHTIQEVRVVKGLNNPELDQAVGD
                     DLAQQLRDELELVQGASHEFDHTEFIKGELTPVFFGTALGNFGVNHFLDGLTEWAPAP
                     QARQSDEREVSPSEEKFSGFVFKIQANMDPKHRDRVAFMRVVSGKYEKGMKLKHVRIG
                     KDVVISDALTFMAGDRSQAEEAYAGDIIGLHNHGTIQIGDTFTQGENFKFTGIPNFAP
                     ELFRRIRLRDPLKQKQLLKGLVQLSEEGAVQVFRPLINNDLIVGAVGVLQFDVVVSRL
                     KTEYGVEAIYETVNVATARWVEGKDAKKFEEFKRKNEANLALDGGDNLTYIAPTMVNL
                     NLAQERYPDVQFFKTREH"
     gene            12144..13718
                     /locus_tag="PXE50_000259"
     CDS             12144..13718
                     /locus_tag="PXE50_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5621200.1"
                     /translation="MKKWLIPLTVAAFCVSACDDKNSTQATAEKPQVENTQSQKNAEI
                     LPLATVVAPWEINSLDPNQSGVIFQRMNLAETLVEADLNGNLIPALATDWRSNEEGTI
                     WRFTLREGVKFHNDQVLTAQAVVNSLNIAKSKPGVLAKAFIKEIRAVDNKVEIELTKA
                     FVPFPPFLTHYTALILAPESYNEKGEVTQIIGTGAFKPTKIEAPQKLEAVQFEGYWGK
                     KPQVQQANYLASSRSETRMLMAQSEPSSLVFNLDTASVARLKADPNLQLVSGSIARTI
                     QLKMDVAKPFFNDLAIRQALSQAINRKAIAEQVLKIENGAADQILPKAFADWRVDTAE
                     QVVDIAKIKQNLTASGYTFDEQGRLTKDGKPFSFTMRTFSDRPELPVIATILQAQWKQ
                     IGVEVNVSVGNFSEIPAGHQDGSLEMALYALNYGKTLDPYGVIASDFANGGSDWGVMN
                     WQNTEVDNAVKSLETERDPQKAKALKQTVSKIIYNDLPIIPVVYYQQNVVAHKEVKNV
                     TLDPFERRFFLELLSK"
     gene            13938..14870
                     /locus_tag="PXE50_000260"
     CDS             13938..14870
                     /locus_tag="PXE50_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5621201.1"
                     /translation="MHKILFRRLIQILLVIWSVGTLTFILTRQLSGDMAYRIAASRYG
                     YDQADSAAAEAVRAELGLDQPWWQSYFSWLSDLAQFNLGKSLVTGDPVWSEIQHQFGH
                     TLSLAIVALILAILIGPPLGLLAARKPNGFFDRLTLVFSTLFRSVPAFIIAIGLITLF
                     SAQLKWLPAGGYGCWQHFILPALTLAIGLSTVSVRVTRSAMVQVKGSEFYQFSQLKGL
                     SRWHTFLRHGLPNIAVPVIAYHAVQLVYLIEGVVVVESLFAWPGSGHALVHAIIARDV
                     PMIQGTTLVMGGLFVVLNTIADLLSAWIDPRIKR"
     gene            14880..15662
                     /locus_tag="PXE50_000261"
     CDS             14880..15662
                     /locus_tag="PXE50_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5621202.1"
                     /translation="MKISISQYLGGTILLAMLGFAFLQPYFYPMDIGFQDLTNILSNP
                     NEIAWFGTDHLGRDMLARLASAIRLSFGLSLFSVICALIAGLITGIMAGFFGGWIDRI
                     FSFICDLVMALPGLLLVLLFAALSPGSFWTLYLGISLVMWVEFFRVIRSISSTMANSS
                     EIQASRLMGMGWFYSFKRHLLPRLLPMIATLSAFSLGNAILALATLGFVSVGLRPPTA
                     ELGLMMTELFPYYYEAPLIFLQPVVAVFLMVLSLQLLSRKIK"
     gene            15751..17163
                     /locus_tag="PXE50_000262"
     CDS             15751..17163
                     /locus_tag="PXE50_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5621203.1"
                     /translation="MKLLDIQNLSVETENRLQLVEPISLQLKAGKNITILGETGSGKS
                     LLIQAIMGALPDGLIASGEISVKNCKISTESDRLQTLWGKTLVMLPQEPRRSLNPIMA
                     IGKQLWESFHYVAGKPSSQAKTESKAYLAKLGLGESVENYPHQLSGGMAQRASFAIAT
                     AAGGKILLADEPTKGLDPISKGKVIELLKSAYQNGGGLLTITHDIEVAEQLGGTILVM
                     KKGELLEQGEAKALLNNPQHPYTKALISADPKHWQPLQDLQNLSQKQPLVSVKNLSIA
                     RGKKTLFSNLSFDLHKGEVLGIVGHSGIGKSSLADVLCGLLKPKSGEVVWHSHSHKKH
                     QVLKLYQDPPEAFAPNVSLKTLLDDVINKHQLDRLPIPSLLQQLSLNPEILQRNAENV
                     SGGELQRVAILRALLLEPVLLFADEVTSRLDPITQQETIELLINQCRARNCSLILVSH
                     DPYLIEKSCDKVINLEEYVG"
     gene            complement(17250..17993)
                     /gene="rlmB"
                     /locus_tag="PXE50_000263"
     CDS             complement(17250..17993)
                     /gene="rlmB"
                     /locus_tag="PXE50_000263"
                     /EC_number="2.1.1.185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HDL5621204.1"
                     /translation="MSEQIYGIHAVKAFLDNAPERLIEVLVLKGREDKRLMPLLNELQ
                     RLGVAIQQVNRQTLDNKSQGEVHQGIIARVVPQKELNEHDLEAILSQKKNPLLLILDG
                     VTDPHNLGACLRTADAAGVDAVIVPKDKSAQLTPTARKVACGAAEVMPLIRVTNLART
                     MRDLQERHNVWIVGTAGEAESGIYEAKLTGSIALVMGAEGDGMRRLTREHCDQLISIP
                     MAGSVSSLNVSVATGVCLFEIVRQKLAGQ"
     gene            complement(18048..19415)
                     /gene="pssA"
                     /locus_tag="PXE50_000264"
     CDS             complement(18048..19415)
                     /gene="pssA"
                     /locus_tag="PXE50_000264"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HDL5621205.1"
                     /translation="MLILNKQRKAEYLLKSLPYLPQVAEQVQFLASSKAFKQQILQLI
                     QTAKKRIYITALYFEKDEAGQEVLAALYQAKRNNPELEINILVDWHRAQRGRIGEAEN
                     LSNADWYAKVKYEQGLPAGQEIAFYGVSINGREVFGVLHLKGFVFDDTILYSGASINN
                     VYLHQFERYRYDRYHVIENKVLADSWVTFIQQHLLTNEAVKRLDTENRPKTAEIRAQI
                     KHFRKQLSREAYLFNGVAENGRLAVSPLVGLGRRKNQLNKVIEALFYQTEQKLTICTP
                     YFNFPHSLRTRIEWLLANGKSVEIIVGDKTANDFYTKPDEKFTMASALPYLYEKNLRA
                     FAKRLDGYVQNKQLTIRLWKDGENSYHLKGVWVDNRYILLTGNNLNPRAWRLDAENAI
                     LISDPQHQLSEKAETELNQICQHTQILTHYSDLEVLTDYPENVRKLLKKFGRVKLDKI
                     VKMLL"
     gene            complement(19485..21032)
                     /locus_tag="PXE50_000265"
     CDS             complement(19485..21032)
                     /locus_tag="PXE50_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tannase/feruloyl esterase family alpha/beta
                     hydrolase"
                     /protein_id="HDL5621206.1"
                     /translation="MMKIIAFLFIFLSVFSHTALANSMAEQCVALKSNSPEKTAIYKA
                     EWVEKSAELPAYCLVQGEIGKRVEVDNVPYGIQFELRLPEQWNEKFLFQGAGGVGGVI
                     FPAIGKLYPHGASGANGLNRGYAVVSNDSGHATRDLVFTADPEARSNYAYASIGKVTT
                     VAKQLIAEFYRKPSKHNYIMGCSNGGREAMMAAMRYPQEFDGVIAGSPGFRVSRSVLA
                     EVWDNRALLAVAPKNGDGDKILSQALTQQDLDVIANGVLTRCDKLDGLADGLINAWEQ
                     CDFQPEMVAKQLGQKKVALIKTIFEGAKNSRGELIYSPWAYDSGINAKGWRDWKLGDS
                     QTAQPNSISFKMGLKSLTHYYLAPRVPSRDPLSVDLDQASEQVKAVGSIHDTDQVDLS
                     AFKQNGGKMLIYQGVSDPIFSAVDLKNWYQSLQQAVENPQHFAKLFFVSAMNHCGRGA
                     TVNDFDMLTALENWVEKGLEPESIAAKAGELYPNKAKQIPLCAYPKVAIYQTGEDPNR
                     LTSYQCR"
     gene            complement(21157..23973)
                     /gene="ileS"
                     /locus_tag="PXE50_000266"
     CDS             complement(21157..23973)
                     /gene="ileS"
                     /locus_tag="PXE50_000266"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HDL5621207.1"
                     /translation="MTIDYKNTLNLPETGFPMRGDLAKREPDMLKNWYDKNLYQKIRT
                     ASKGKKTFILHDGPPYANGNIHLGHAVNKILKDMILKSKTALGFDTPYVPGWDCHGLP
                     IELKVEGIVGKPNEKISAAEFRQACRDYAKEQVEGQKADFIRMGILGDWDNPYLTMNF
                     NTEANIIRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFNAV
                     DVNAVEEKFNAQGKGRGALSAVIWTTTPWTIPSNRAIAINPELDYALVQLGDERVLLA
                     VDLVEDVAKAAGVESAEILATTKGENLELLRFNHPFYDYSVPFIFGDHVTTDGGTGLV
                     HTAPDHGADDFVVARKYNIEMAGLISNDGKFKADTPFFAGLGVFESNDKVVEKLQEVG
                     ALLKLSRIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKSVRWIPSWGE
                     ARIDTMVANRPDWCISRQRTWGVPMAMFVHNETEELHPRTLELIEEVAKRVEEKGIQA
                     WWDLDPAELLGEEAKDYRKVPDTLDVWFDSGSTYASVVEQRPEFNGNSADMYLEGSDQ
                     HRGWFMSSLMLSTATNGKAPYKQVLTHGFTVDEKGRKMSKSLGNVIVPSEVWNKNGAD
                     ILRLWVASTDYTGEITVSHNILNSAGESYRRIRNTARFLLANLNGFDPKSDLVQPQEM
                     IALDRWAVACALEAQNDIKEAYDNYQFHTVVQRLMRFCSIEMGSFYLDIIKDRQYTTK
                     ADSLARRSCQTALWHIAEALVRWIAPILSFTADEIWGYLPQVEGRSEFVFTEEFYTGL
                     FGLTEQDKLDDAYWQQILKVRAEVNRVLEQARKDKVIGAGLEAKVTVFANDEIRPLLE
                     QLGNELRFVLITSQAIVKPLAEADIAEGELAGLAVKVENADGEKCPRCWHYATDIGSH
                     SGHEEVCGRCVENVAGEGEKRLFA"
     gene            complement(24076..25038)
                     /gene="ribF"
                     /locus_tag="PXE50_000267"
     CDS             complement(24076..25038)
                     /gene="ribF"
                     /locus_tag="PXE50_000267"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HDL5621208.1"
                     /translation="MQLIRGFHNLDKHIALNQGCVLSIGNFDGVHLGHQNILARLCDR
                     ALDLGLPSVVMLFEPQPREFFAKKSGNSTACNPPARLMRLRDKLKYLEEAGVDFVLCV
                     RFSEKFAQISADDFISDLLAKRLKVRYLSVGDDFRFGAKRAGSFETLRNAGLKYRFAV
                     EESHTHSLNEERISSSLVREALQNNELDLAEKLLGKPYSILGRVAHGNKLGRTIGFPT
                     ANIMLNRLVTPIQGVFAVKVKTKQGSFNGIANVGNRPTINGTKPLLEVHIFDFNASIY
                     GEAIEVIFLKKLRNEIKFPDFEALKAQIEKDRLQAVEFFKEFAR"
     gene            25262..26536
                     /gene="nadR"
                     /locus_tag="PXE50_000268"
     CDS             25262..26536
                     /gene="nadR"
                     /locus_tag="PXE50_000268"
                     /EC_number="2.7.1.22"
                     /EC_number="2.7.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional transcriptional
                     regulator/nicotinamide-nucleotide
                     adenylyltransferase/ribosylnicotinamide kinase NadR"
                     /protein_id="HDL5621209.1"
                     /translation="MTDFAYLQQKRKQLKLKVNDICEQAGVTRAYFNQLVSGKIKNPS
                     ANKLKALHSVLDIVEDSNQRSGVIFGKFYPIHTGHINMIYEAFSKVDVLHVIVCTDSE
                     RDLRLFQESKMKRMPTNEDRLRWVQQIFKYQQKQIFIHHLVEDGIPSYPNGWEDWSGR
                     VKALFEEKSINPTIVFSSEIQDKESYEKYLNLEVQLVDPTRESFNISATQIRNNPFQY
                     WRFIPKEVRPFFVKTIAILGGESSGKSVLVSKLANVFNTTSAWEYGREFVFEQLGGNE
                     QAMQYSDYPQMVLGHQRYVDYAMKHAHKVAIIDTDYITTQAFCIQYEGKAHPFLDSMI
                     REYPFDVTILLSNNTKWVADGLRSLGSKKQRQQFQHLLKKLLEKHHIPYIKIESPSYL
                     DRYNQAKEVVEAILNEEPIPLQFKQYNIHEFE"
     gene            26554..27246
                     /locus_tag="PXE50_000269"
     CDS             26554..27246
                     /locus_tag="PXE50_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDL5621210.1"
                     /translation="MILFAGDPHGSYEHLYPILQQQTEEVALVILGDLQLTTPDELDR
                     LSQYCDIWFIHGNHDSKTVAAFDAIWNSSWKERNIHGKVVDIQGIKIAGIGGVFRGHI
                     WMPPNRPMFFDPIHFCQYSAPEKIWRGGIPLRHRSSIFPSDFEALENEKADILITHEA
                     PKPHPQGFSVINQLARKLGASKIFHGHYHDNFNYGNLNVSRECAIYNIGFRSLADING
                     NYLILGVDDREK"
     gene            27379..28101
                     /gene="arcA"
                     /locus_tag="PXE50_000270"
     CDS             27379..28101
                     /gene="arcA"
                     /locus_tag="PXE50_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator ArcA"
                     /protein_id="HDL5621211.1"
                     /translation="MKIPQILIVEDELVTRNMLKSIFEGEGYQVFQASNGEEMHSVLS
                     TNEINLVLMDINLPGKNGLILAREIRENMKLPLMFLTGRDNEIDKILGLEIGADDYIT
                     KPFNPRELTIRARNLLQRTMIDKENDVVKEQSEIESYRFNGWILDINSHSLISPEGEV
                     NKLPRSEFRALLHFCQHPGKIQTREDLLKKMTGRELKPHDRTVDVTIRRIRKHFEDHP
                     NTPEIIVTIHGEGYRFCGNIEP"
     gene            28121..28639
                     /locus_tag="PXE50_000271"
     CDS             28121..28639
                     /locus_tag="PXE50_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin family protein"
                     /protein_id="HDL5621212.1"
                     /translation="MKKLTIVALTCLFSTHLLAAPVGNTFTGIGVGVDVTTTKYKVEG
                     VKGKDSTGPALVVDYGIEQGNNFVGVVQGKAKVGSTKVFSDVKQKNKYTIAYQQGYRV
                     GSDLLPYVKVDASSSKIGNETYRGFGFGAGAKYAVSSDVELGAEYTRDNLKRSGTKLK
                     GNAFTANATYRF"
     gene            complement(28717..29946)
                     /gene="serA"
                     /locus_tag="PXE50_000272"
     CDS             complement(28717..29946)
                     /gene="serA"
                     /locus_tag="PXE50_000272"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HDL5621213.1"
                     /translation="MAKISLDKSKIKFLLLEGVHQNAIDVLLAAGYTNIEVHKKALDG
                     QELIDAIKDAHFVGIRSRTFLTEEVLAQAPKLIAIGCFCIGTNQVDLNAAKRRGIPVF
                     NAPFSNTRSVAELVLAEMILLMRKVPTANAEVHRGVWNKSAAGANEVRGKKLGIVGYG
                     HIGSQLSILAEAIGMQVYFYDVENKLPLGNAQQVPTLEHLLSTCDMISLHVPEIDSTK
                     NLMSAERIAQLKEGSVLINAARGTVVDLDALAARIEDGSLRGAAIDVFPEEPASINDP
                     FVSPLCKFDNVILTPHIGGSTSEAQANIGTEVANKFVKYSDNGSTVTAVNFPEVSLPL
                     HTNTKRLLHIHENRPGMLNQINQIFVESNVNIAAQYLQTDAAIGYVVIDVESDNVDEA
                     LQRLKAIEGTIRARVLY"
     gene            complement(29983..30642)
                     /gene="rpiA"
                     /locus_tag="PXE50_000273"
     CDS             complement(29983..30642)
                     /gene="rpiA"
                     /locus_tag="PXE50_000273"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HDL5621214.1"
                     /translation="MDQQEMKKIAAQAALKFVKPDTIVGVGSGSTVNCFIDALASMKD
                     EIKGAVAASKASEQRLRDIGIEVFSANEVTELDVYIDGADEITPQGAMIKGGGAALTR
                     EKIVSSLAKKFICIVDKSKQVDVLGSTFPLPVEVIPMARSYVARQLVALGGSPEYREG
                     VVTDNGNVILDVHNFKIMEPLKMEHTINNIAGVVTNGIFAQRFANVTIVGTPEGAVIL
                     E"
     gene            complement(30787..32121)
                     /gene="glmM"
                     /locus_tag="PXE50_000274"
     CDS             complement(30787..32121)
                     /gene="glmM"
                     /locus_tag="PXE50_000274"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015939592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HDL5621215.1"
                     /translation="MARKYFGTDGVRGEVGKFPITPEFALKLGWAAGKVLATQGTKKV
                     LIGKDTRISGYMLESALEAGLTAAGLSAVFVGPMPTPAIAYLTRTFRAEAGIVISASH
                     NPYYDNGIKFFSSVGEKLPDEIEEAIEAMLDKPMDCVDSANLGRASRINDAAGRYIEF
                     CKGTFPSELSLEGYKIVVDCANGATYHIAPNVMRELGAEVLEIGTKPDGLNINEKCGA
                     TDIKALQKVVVEAGADVGLAYDGDGDRLIMVDHLGNKVDGDQILFILAREALRSGKLQ
                     GGVVGTLMSNMSLELALKELAIPFSRANVGDRYVLEQLKEKGWKLGGENSGHIIVLDK
                     NTTGDGIIASLQVLAAMASHKLSLNDLAKAVPLFPQVLLNVRFEKGAANPLESNEVKA
                     VAADVEKRLAGKGRILLRKSGTEPLIRVMVECEDAVLAQSCAEEIVEAVKRN"
     gene            complement(32147..33679)
                     /gene="ilvA"
                     /locus_tag="PXE50_000275"
     CDS             complement(32147..33679)
                     /gene="ilvA"
                     /locus_tag="PXE50_000275"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HDL5621216.1"
                     /translation="MMNETQHSQSAIDYLRSILSSNIYDLAQVTPLQKMEKLSERLGN
                     SIFIKREDRQPVHSFKLRGAFAMISNLSKAQKEAGVIAASAGNHAQGVALSAKHLGLR
                     ALIVMPQNTPAIKVDAVRGYGGEVLLYGANFDEAKAKAIELSTELGMTFIHPFDSPAV
                     IAGQGTIGLELVQQKPDLDYVFIPVGGGGLIAGIAVLIKQVMPNIKVIGVESKDSACL
                     YHALKQGQPTDLERVGLFADGIAVKRIGDETFRLCQQYVDDVVLVDNDEICASMKLIF
                     ENVRAISEPSGATSLAGLKKYVKEHQLQDKNLACILSGANVNFHTLRFVSERCEIGEK
                     REALLAVTIAEQKGSFLKFCEILGNRAVTEFNYRHSDDKQACIFVGVRISGSAEKVEI
                     IKDLQQNGYDVADLSDDDIAKTHIRYMVGGRASSIQYEQLYSFEFPEQKGALLKFLQM
                     LTNWDISLFHYRAHGADYGDILAAFALNRGDEVELNRHLEQLGYRFQNVSESPAYQYF
                     LK"
     gene            complement(33940..34533)
                     /gene="slyD"
                     /locus_tag="PXE50_000276"
     CDS             complement(33940..34533)
                     /gene="slyD"
                     /locus_tag="PXE50_000276"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDL5621217.1"
                     /translation="MNITKDLVPSIAYQVRTQEGVLVDEAPVNQPLEYLHGHNNLVEG
                     LEKALEGKAVGDVFEVRVKPEEGYGEYNDNMVQRVPKDVFMGVDELEVGMRFIADTDL
                     GPLPVVITEVDGDEVVVDGNHMLAGQELLFSVEVVGIREATAEEIAHGHVHGGHEHGC
                     GCGGHDHHHDHDGCCGGHDHDHHHHHGHGGCGCGGHH"
     gene            complement(34636..34776)
                     /locus_tag="PXE50_000277"
     CDS             complement(34636..34776)
                     /locus_tag="PXE50_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621218.1"
                     /translation="MKKLIKVCGLISATIFLSGCLVTSVVGGVVGTAVDVVDTVTPDI
                     ID"
     gene            complement(34848..35534)
                     /gene="aqpZ"
                     /locus_tag="PXE50_000278"
     CDS             complement(34848..35534)
                     /gene="aqpZ"
                     /locus_tag="PXE50_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin Z"
                     /protein_id="HDL5621219.1"
                     /translation="MKKYFAEFFGTFWLVFGGCGSAVLAAGIPELGIGYAGVSLAFGL
                     TVLTMAYAVGHISGGHFNPAVSIGLLVGGRFNAKDLVPYIIAQVIGAIAAGAVLYTIA
                     SGVPTFDATAGFAGNGYGEHSPHGYSLTAALLIEVVLTAFFLIIIMGATDKRAPAGFA
                     PIAIGLALTLIHLISIPVTNTSVNPARSTGVALFQGSWAIEQLWLFWVAPIVGAIIGA
                     VVYRFIAEEK"
     gene            complement(35722..36441)
                     /locus_tag="PXE50_000279"
     CDS             complement(35722..36441)
                     /locus_tag="PXE50_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253715.1"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HDL5621220.1"
                     /translation="MKLKNFLTILPLAVATAVTSAETHTVEHKDKPASFNFSTEVSRT
                     VEKDVMQASVYSQKSGNSLPELKKFVSENLNRVLAEAKKHPSIEVQAEGVTNHVNYNN
                     KGNIDGWDTSGSIQLKSKDFDAMAAVLENLGKDVAIRYIDFSVSPEKMASLEDEMTLE
                     IISKFQHKADVIQKALGAKTYKLVNINIQTPNDGGRPYYEHRAMYAVSSMAQSKSMDE
                     IPLEAGKTTISATASGSVEFE"
     gene            complement(36499..37236)
                     /gene="tsaA"
                     /locus_tag="PXE50_000280"
     CDS             complement(36499..37236)
                     /gene="tsaA"
                     /locus_tag="PXE50_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HDL5621221.1"
                     /translation="MNSTSNQLTPIQLNPIGFVESPYDEKFSVPRQPNLVAEGKGILR
                     LIPPYNTPDAVRGLEKFSHIWLIFQFHHIPEREWHATVRPPRLGGNERVGVFASRATH
                     RPNPLGLSKVKLEAVVAGGSEVYLKLGSVDLVNGTPIFDIKPYIAFADSEPQAVSGFA
                     QQKPQARLAVRFSEEAKQAVEFCRNFAKFGIEQPLSFLADVIAQDPRPAYQQGKPSER
                     VYGMNLAGYNIRWQIENDTQAIVLSIE"
     gene            37416..38324
                     /locus_tag="PXE50_000281"
     CDS             37416..38324
                     /locus_tag="PXE50_000281"
                     /EC_number="2.5.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     polyprenyltransferase"
                     /protein_id="HDL5621222.1"
                     /translation="MNKNSLFSIWFTTARPKTLPLALASIIVGSALAHWAGKFDVVTT
                     LLAFITTILLQILSNFANDYGDHVKGSDTKERIGPLRAIQHGVIGGEQLKKAVIILSL
                     LSFVSGVALSAYAFETVQDLFFFIGLGIVSIIAAITYTVGKKAYGYLGLGDLFVLIFF
                     GFVAVIGVFYLQAHSLPIMILLPAFGCGLLSVAVLNINNLRDINQDRQAGKNTLIVRI
                     GSQNGRKYHVALLVLAVISYLIFAISEFEHWYSFIFLLSVPLLAKHARFVYQHKDPKE
                     LYPILGQMAGLALLTNLLFSLGIVLG"
     gene            complement(38400..39386)
                     /locus_tag="PXE50_000282"
     CDS             complement(38400..39386)
                     /locus_tag="PXE50_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3298 domain-containing protein"
                     /protein_id="HDL5621223.1"
                     /translation="MKKSLLALLIGSVFLISACEDGKMTQTVLEAEKQIVQLGTELKN
                     AQADLAKKEAEVAELSGVKAENEKLKSELENAQQNTALNVEIVKIFDKKEVIKHQVDP
                     KQEFAIEESTVSAFVSLPKTNFDWLNQLLINQAYDYNEEQGRKLKNPTEEEFKKHREA
                     VYQGLVESVKTEPAIGYDDHISSAFIGQRNNIATFTMMHYTYMGGAHGMHYTQYINVD
                     LAKKAIIGLNDLISPKNQVQLKDILWENYSSVRVDENGNYNGFADKKEFRISDQFYFT
                     PHGIAFVYPPYELGAYAEGDIEVEADWYIINKLLNSEYQRGEKDGFFEELDN"
     gene            complement(39480..41351)
                     /gene="rpoD"
                     /locus_tag="PXE50_000283"
     CDS             complement(39480..41351)
                     /gene="rpoD"
                     /locus_tag="PXE50_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HDL5621224.1"
                     /translation="MENQADQQLEQQSQLELLISQGREQGYLTLSEVHDHLPEELVDA
                     EQIEDIIQMINDMGIQVLEAAPDADDLLLAENIADEDVVEEATKVLSTVESELGRTTD
                     PVRMYMREMGTVELLTREGEIDIAKRIEEGINEVQCAIAEYPEALSGLLACYAQVETG
                     EMRLSDLVTAFVDPNILEEAPLEDIEAALGEDEESSDVPDVDDENEDENGDSSSDSSD
                     DSSIDPELAREKFEALRSQHEKVLLVIQKHGRTSKKSKEQIEILSHIFREFRLVPKQF
                     DLLVASMQKLMKQVRTEERQIQRYAVEYAGMKKADFLKAFQGHELSEAWIEKAINAKK
                     NAAPKLANYVDNIRVNIANLQNLEQTSGLTIAQIREIGGRISNGELKARRAKKEMVEA
                     NLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAIT
                     RSIADQARTIRIPVHMIETINKLNRISRQCLQEMGREATPEELAERMGMPEDKIRKVL
                     KIAKEPISMETPIGDDDDSHLGDFIQDESLELPLDSATAESLRMATNEVLEGLTPREA
                     KVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSETLRSFLDD"
     gene            complement(41610..43358)
                     /gene="dnaG"
                     /locus_tag="PXE50_000284"
     CDS             complement(41610..43358)
                     /gene="dnaG"
                     /locus_tag="PXE50_000284"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HDL5621225.1"
                     /translation="MKGTIPRSFIDDLIARTDIVEVINSRVKLKKAGRDYQACCPFHH
                     EKTPSFSVSQSKQFYHCFGCGVHGNVITFLMDYDKLEFPEAIEELAAMHGLEVPRENV
                     IQRDGKPQANFKTKRNLYELMEAVAKFYQQNLSHQIEPQSYLQQRGLSEEIIERFEIG
                     FAPNAFDAALRTFGQSQEDIQKLLDTGVLTKNDSGRIYDKFRNRVMLPIRDKRGRVIA
                     FGGRVLPNDEQGAKYMNSPETVIYHKGSELYGLYQALKVNETPDYLFVVEGYMDVVAL
                     AQFGVDNAVASLGTATTGEQIQQMFRCTEQIVCCYDGDRAGRDAAWRALENALPYLQD
                     GRQLKFIFLPDGEDPDTFVRSQGKEGFEQYVAQNAKPLSDFLFDSLLADVDLSSKEGK
                     SKLAALAVPLINRIPGEMLRVYLRNILGQKLGILDPTQIEALLPTKKAAEKPLHQAVK
                     MKRTPMRLLIALLIQNPYFVKFVPDVSALASLKDPGFTLLTDIVATCQQNAGISMGGL
                     LEHYREDPQYKIVEALANWDHLELPENIERTFIDTLDFLYAKLVELRKEELIAKDRTV
                     GLTDDEKKEYALLMFQ"
     gene            complement(43512..43727)
                     /gene="rpsU"
                     /locus_tag="PXE50_000285"
     CDS             complement(43512..43727)
                     /gene="rpsU"
                     /locus_tag="PXE50_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005701713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HDL5621226.1"
                     /translation="MPVIKVRENESFDVALRRFKRSCEKAGILAEVRAREFYEKPTTI
                     RKREKASLAKRHAKRNFRENARNTRLY"
     gene            complement(43875..44471)
                     /locus_tag="PXE50_000286"
     CDS             complement(43875..44471)
                     /locus_tag="PXE50_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HDL5621227.1"
                     /translation="MSLLPMNEITSLNQLDLQKSYSYADYLLWKFKERVEIIKGKIVA
                     MSPAPTRFHQRISMKMTAKFLEVFDNHQCQIYSAPFDVRFPDENGKVKTVVQPDLCVI
                     CDVSKLDERGCVGAPDLVVEILSPGNTKREMKDKYELYQEQGVKEYWIVSPETRTIQI
                     FVLENGKYIGIQPVAEDEPATSVVFPALSFSTEKLFEL"
     gene            44613..45869
                     /locus_tag="PXE50_000287"
     CDS             44613..45869
                     /locus_tag="PXE50_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HDL5621228.1"
                     /translation="MHLNFKKIDNSHIALFYNVLVATFFVTVLTFKKGYSYVPMALGI
                     IATLSFLFYRFKLKQKWLLDKEDKFFIFSLIGYFLTFAMSAIFNGDGIREIDNPIQIL
                     LLIPLIILFRLYPIKKETVLHFIPIGALVAGCIAIYQRFILNLKFPFPEIMRIQSGNI
                     AILLSLFSIAIAFYWLSKKRIKTGIAYLVFAMFGLFASILTGARGGWLAFIPICFFIL
                     FLNLRQLNKKAIFLILLALISSLSFFISKPEFGIQKRYNAAKNDIIVFLEKGNRHSSL
                     GARFDMWENALIGIREKPLLGHGSTGYETFKKKQIETKQMAKTTLRFNSLHNQYLEAF
                     VKRGVVGFMALMAILIIPFVIFAKRLKAKNREVKCMAILGIVHIISHSFFFLSQSFLA
                     HNSGSLFYFFVLILLYHLVKQNEEII"
     gene            complement(45971..46978)
                     /gene="rfbB"
                     /locus_tag="PXE50_000288"
     CDS             complement(45971..46978)
                     /gene="rfbB"
                     /locus_tag="PXE50_000288"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HDL5621229.1"
                     /translation="MIILITGGAGFIGSALVRYLIEHTPHTVINVDKLTYAGNLASLE
                     SVAHHERYHFEKADICASGQISEIFGKYQPDVVMHLAAESHVDRSISGAADFIQTNIV
                     GTYTLLEAARAYWDTLPEPRKSAFRFLHISTDEVYGDLAKSEELFTEKTPYNPSSPYS
                     ASKAASDHLARAWHRTYGLPTVITNCSNNYGAYQYPEKLIPLMILNALEGKSLPVYGN
                     GLQVRDWLFVEDHIRALYLVLQKGQIGETYNIGGHNEKTNIEVVRSICSILQEMVPNN
                     PLVVGQYADLITYVQDRPGHDFRYAIDTSKIEKELDWKPKETFESGLRKTVEWYLANR
                     N"
     gene            complement(46975..47556)
                     /locus_tag="PXE50_000289"
     CDS             complement(46975..47556)
                     /locus_tag="PXE50_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase"
                     /protein_id="HDL5621230.1"
                     /translation="MLEKIEKLIDEINKLHLAFSKDYFETGKIEKVNLKHTFAKVPTP
                     HILAYRLNLHESINDYLYRADLEGISYFYRVKTSESILDKIERFKQRSEGYPVNSILN
                     DIFGARIIVSSEVIQQVMESLDYWQEKYGLKNWYLRDKDEYVGIHIYFKNSSNFYYPW
                     ELQIWDKKDAEKNIQSHIKYKRNFVNQISYSPL"
     gene            complement(47577..48848)
                     /locus_tag="PXE50_000290"
     CDS             complement(47577..48848)
                     /locus_tag="PXE50_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HDL5621231.1"
                     /translation="MSIQQKKRHSRWYERIFFSTAVQSILGVMFSSVLPAIYFWGEKF
                     NSIETRSNTIIATSLAFVMIAISLRVLMKYPGNKSASFVFSTVISWYAVLLIVLTIFR
                     FDYSNTLLGTSFILTILFCFIGYFLSRSWIIPKIALVPFGRAINLNRIQNVEWIQLSE
                     PILGEKRINSIAVDLHYPDLSAEWHKFLAKCTLNGIPVYNVRQLEESLTGRVKIRHMY
                     ENDLGSLLPSPIYSLVKRIIDIALIVATFPITLPIMTITAIAIRLESEGGAMFIQKRV
                     GQGGKEFNIYKFRSMCKDSEKDDAQFASSADMRVTRIGKFIRKTRIDELPQFFNVLKG
                     DMSLIGPRPEQTAFVDKFEEEIPFYNYRHIVKPGISGWAQVVQGYAADVDDTKVKVEH
                     DFYYIKHFSLWLDILIIFKTLKTMLTGFGAR"
     gene            complement(48852..49660)
                     /locus_tag="PXE50_000291"
                     /pseudo
     CDS             complement(48852..49660)
                     /locus_tag="PXE50_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_162680708.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
BASE COUNT        14421 a        11067 c         9488 g        14695 t
ORIGIN      
        1 tctaaacgtg ttaaagaaaa attatctcac tgtatcaatt ctccttgcca ttagtggagt
       61 aggctacgct aatgaaatct ctttagagac tattactgtt gatggaaata cgccttcaac
      121 caaagggaaa ttactaggtg gtgaactaaa tagcaatgaa tctgttgttg atgaaaaaaa
      181 ttaaaacaag gtagtattac attaggtaac gctttatctg gtgaattagg cattcattca
      241 agccagttcg gaggcggtgc aagtacccca attattcgtg ggcaagagag taaacgtgca
      301 aaaatcttac aaaataatgg cgaaaactta gatatgtcgg gaatgtctcc tgatcatgca
      361 gtaaccgtag atgcgctact tgctaaacgt attgaaattt tacgtggtcc aactacttta
      421 ctttacagtg caggtaatac ggcaggtgta attaatgtgg tagacaataa aattccaacc
      481 gctattcccg aaaaaggcta tgaggggcaa tttggtgtgc gttttggctc agccagtaaa
      541 gagcgtttaa cctatgcagg ctcaaccttt gcccttggaa atcatttagc cttgcgggta
      601 cagggaatgt ataacaaagc ttccgaatac tatgctccac actttacgat tgaaggcaaa
      661 ccttaccacc gcgtaccaga tagcgatgta caatcacaaa ccggcacagt aagcctttct
      721 tggattggag agcgaggaca tcttggtatt gcttacactg atcgccgtga taaatatgga
      781 ttaattggtc acacacacaa atacgatcac tatactatta gtattattcg ccaagccgtt
      841 atgtttgcaa aaggttattt acgtttttat ccgcaccttg cagaagaagg agatattgac
      901 tataacaacc ctggtatccg tttactgcat actcatattc cgggaggctc acattatgga
      961 caagatactc acgagcacgg caaaccttgg attgatatgc actccaagcg gtatgatatt
     1021 gatggaagtt tgcaaaatcc acttcctggt tttgaagaag ccaaaatatc agctaactat
     1081 gtagattact atcatgatga aaaagatgga aaaagagttg aaaattactt caagaacaaa
     1141 ggaaaaaatc tacgtttcga attggttcac aaagagtgga aagggctaaa aggagctatt
     1201 ggtgtgcaat ataccaacca atctacctca gcacttgcac ttgaagcttc acgagctgca
     1261 aaagtattta ataaacagcc tttactcaat aatccaaaaa caaaattatg gagtctcttt
     1321 gcgattgaac gccttaattt aggtgacttt acctttgagt taagtgggcg ggcagaacgt
     1381 caaaaaatag caatggatta tgatgtgaaa ttaattgatc gctggctagg ctttaataca
     1441 cctatgccaa acttggaccc acataaagac aaaggttatt cttatagctt tgcaactcat
     1501 tggtatttcg caccaaacca taagttaaca ttaaatgctg cacatcaaga acgtttacct
     1561 aatgctcagg aactctatgc tcatggtaaa cacattgctt taaatgcatt tgaggctggc
     1621 aataaaaatc taaaaaaaga gcgttctaac caaattgagc tatcattagc ttatgttggc
     1681 gacaaatggg attataaatt aaatctctac cacacccgct atggcaacta tatttaccca
     1741 ttaactctta atgataatcg tggacctaaa tcttttaccg atgaatataa cttgaaagtg
     1801 aatagatatt atcaaggcga agctcgtttt agtggggcag aaggcgaaat tggttatcta
     1861 tttacaccaa attatcgctt agccgtattc ggagactatg tccgtggaaa gttagtcaac
     1921 ttacctaata ttgcaatgag ttacaacatt tggacaggtg aagttgacaa atgggcttct
     1981 cagccagaca tttctgcacc tcgtatacca ccactacgtt taggagcaag atttaatgct
     2041 gacttcaacc taaactggtc tggaatgtta gaatattacc gagtatttgc tcagaaaaaa
     2101 gtctcgaaat acgaacaagt tacccctggc catcatcaag taaaccttgg cgtaacctat
     2161 agtaatcatt ttaatcaaac agaataccaa gtattcctta aagtggataa cttgcttaat
     2221 cagaaaatgt accaacatgc ctcatatcta ccacatattc cacaaatggg tagaaatgca
     2281 atgcttggaa tgaatatcag tttttaattt gtaaatctct acaaaaatat aaccgcttgt
     2341 aaatttctat ctacaagcgg ttactttcag tggatttttt gcaattagag atcgtcaatt
     2401 accaagtaaa ttttatttac cgggccgtga acgccaacta ctttaatcaa ctcaatatcc
     2461 gcagtcgccg atgggcctga gatgatattc acacaagatg gcattctttc acctcgttgg
     2521 gctttttcgt gcagaatttg tgcaagctgt gccacacgag gtaacactgt acttttgcgt
     2581 aacacaacca ccgatttttc gggcaataag ctcactgaac gcccaaattc tttatcggaa
     2641 aacagtacaa taccgccaga ctctgccaag ccatattcac cgtaaaccac accgatatta
     2701 gcagttctgg ctttttcaaa gttggtttca gcttggttga aatcccacac atagctgtct
     2761 tcgtattttg cttgaatggc tgcggtaatc ccaagatcct ttaaacgttg atcgttattc
     2821 acgatcacac tcgccccgcc atatttttca caaatatcaa taatggcttg tggtaaatcc
     2881 gcctcttttg cctctactac atctgccatc atcactcggg caaaatcgat aaactcttgg
     2941 caaagttgtg gttgagggcg atcggttaaa cgggtaatcg cgtggttgtt ttccaacaca
     3001 ggaattggct caggcacatt ttggcgtggt ctgcccatac gctgtgccaa tttatttaag
     3061 aaattttcac gattttgtaa atccattttc ttatcctctg ttattaaacc attcacggaa
     3121 actttcgcct tcggcagtcg gtaaatcacg ggctttcgtc cattcaccta acgccccaaa
     3181 attcaccggt gctttgccgt ttttaatcaa tttgcttgcc actttcgccc ccacttttac
     3241 gccgactttc caaagggttg ggtgtgagtt agcgaagtta aagccaaaaa tagacaagcg
     3301 ttctgccatt ggcgttaagc cggcatccgc aattttctca cggtgtttta agataagctg
     3361 tgccagtgga attttcactg gacaaacact gttacaagcg gtacaaagtg agcaagcata
     3421 cggcaattct ttaaactctt cgtagccacc gagcaatggc gaaataactg aaccaatcgg
     3481 gcccggatag attgaaccat agccgtgacc gccaatttgg cgatacgccg ggcaagtgtt
     3541 caaacatgca ccacagcgga tacaacgcaa cacttcttgg aattcgcttt ctaagatttt
     3601 agaacgaccg ttatcgacaa tgaccaagtg gaactcttcc ggaccatcgg tttcgccttc
     3661 aagtctagga cctgtcagcc aagtgttgta agcggtgagt tttgccccta ccgcactgcg
     3721 agccagcatg gtaattaata catcaacctc tttaaaggtt ggggcgatac gttccatacc
     3781 cattactgca atatgcgttt tcggcacagt tgttgccata cgcagattac cttcgttggt
     3841 cactaaacaa accgagccgg tttccggcac cgcaaagtta cagcctgaaa taccgatgtc
     3901 tgcctctaag aaatcttcac ggattttttg gcggacgaat gcagtcatct cttcaggtgt
     3961 ttccgaacct tgataaccta gcacatcgtg catttcttgg cggattctgt ggcgatcttt
     4021 gtggattgca ggtacaacaa tatgagaagg tttatcgccc acaatttgca ataaatattc
     4081 gcccaaatcg gtttcaacca ctttaatgcc ttctgcttct aaaacgtggt tcatcccaat
     4141 ctcttcggtt accatcgact tcgattttac gattttcttc gcatttttag ctttcgccac
     4201 gtttttgatg taatcagtgg cttcttcggc ggtttcggca aagaaaacgt gtccgccgtt
     4261 ttgggtgact ttttcgctta attggtagag ataagcgtct aaattggcta aaacgtggtt
     4321 acgaattgct ttcgcatcat cacgccactc ttcccagttg cccagctcat ccaccatacg
     4381 ctgacggttt gcaccgattg tttcctgagc cttaactaag gctttacgca caatctcgtt
     4441 attaacttgc tgctcaacac gttgtttaaa cggcagggtg ttagtttgta aataagacat
     4501 cttattttcc tccctgcatt aacacttcgg caatgtgcat cactttgatt ggcttacctt
     4561 cacggcttaa acgaccgcca atgttcatca agcagcttac atctgccccg attaaataat
     4621 ccggctcatc ggtatctaca tttgcgactt tctcttttac catctcgccg gaaatttctg
     4681 ccattttgac cgagaatgtg ccaccaaaac cacagcaagt ttcttggttt ttgattggta
     4741 ataactctaa ccctttaacg tgctgtaata aagcaatagg ctcatcttta atccccagct
     4801 tacggaataa gctgcaagac gggtgataaa ctgctttgcc cggtaaataa gccccaacat
     4861 ctttcacgcc cagtttgttc acaataaaat cggttaaatc atagaaacga tcagccactt
     4921 tcttcgcacg ttctgcccat tctttttcgc caaagcgttc aaaatgatcc ggataggttt
     4981 tgatcgcata tacacaagaa cctgccgggg cgacaatcgg gtaatcatta gcttcaaagg
     5041 tttcaaccaa gtttttcata cctgctaaag cttgcttagt gtaaccgctg ttgatcgcag
     5101 gttgtccaca gcaaccttgt ttttctaaga aagtgatttt acaacctaat ttttccaata
     5161 aaagcacagt attttttgca acccctgctt tcattacatc tgcaatgcag gttacgtaaa
     5221 aattaacgtt cataaagaac tcccacagta aatataaata agaattaaac tcaaaaaatg
     5281 ccgttctaag acggcgaaag gaagaggtgg atttgcaaaa aatttgctaa atctcaccgc
     5341 ttcctttcta aatcaagtaa gctgattatt aactcattat aggttataga acataggtac
     5401 tataaacaat gccgaaatcg cagcaataac gccatacacg aacattggca cggctgtttt
     5461 cttaataata ttgccttctt gtttctcaat gccggtaaca gaacacacag ccacgatgtt
     5521 gttaatacac accatattcc ccattgcacc accaactgat tgcaatgcaa gaattaaggt
     5581 aacagataac ccgacttgct gtgccgttgc atattgtact gttccgaagg ttaagttaga
     5641 taccgtattt gaccctgaga agaacgcacc aattgcacct aagaacgagg caaataatgt
     5701 ccaagattga ccggtaaatt ctgcgaagtt tttaccaatg atctgaacca ttgagtctac
     5761 accaccaatt aacattaatt ttaccatcac aatggcacct aaaagtgcta agaatggttt
     5821 tttcacttgt ttaaatgaag tgccaaaaat ctcttgagta tttttacctg ataccgagaa
     5881 aatcggtaag caaattaata cggtcacaac aaatggaatc aacgcaggaa catacagtaa
     5941 tttatagcta gttgctacat tcgtacctaa aatatttttc agtgcaaaaa ttaagccttg
     6001 gctaatttca aagttagcga aaccaagcga actgacaatc caagctgttg catcatttag
     6061 cattgctttt aatggaagtt gctgaatacg ggtgattacc aaaatgaaga tcagtaaccc
     6121 tgttggtaat aatgcttttg ccacttcacc aaaggtcgct ttatcgccgt caaggtggtt
     6181 ctcgcttttc gctaaaccaa tacccatatt tgctacccag actgacacca ataaaccaat
     6241 cgccccggca actaatgatg ggaattcgta gttaaattga gcaataatga agtaaggaat
     6301 gacacaggca aaaatgctga tataaataaa cacgatattt tgacgaattt ctttccagct
     6361 cacaattaaa cgcaatgcca taactggaat aataaacgca gcaatagagt ggatcagtgc
     6421 agtaatagaa ccaatttcaa gcacttgtgc atcggttagt aaaccatctt ttaataatgg
     6481 tcccatacca aaccaagttg gtgtgccaac cgcaccaaat gacaccggca cagagttcat
     6541 tactaaggct aacattgcca cttgtaacgg tttaaagcct aaaccaacca gaattggagc
     6601 tgcaattgcc gccggcgtac cgaaacctga tgcgccttca atcataaatg caaatgccca
     6661 accgataatc atcaactgtg ccaccggatt cgggttaatt gtccctaacc atttacgcat
     6721 agtgttggtt gcacctgaaa cttcagagaa acggttaaat aaaatcgccc cgaaaataac
     6781 ggtaattggg gttaatacat cacctaaacc ggcaataata ttggcaaaga ttaacgtggt
     6841 atcattacca aaataggtaa gctgaagcac aaaaattaat aacgccgtaa gtggtaaagc
     6901 cacataagac ggtaacgcgt tacgttttac cattaaataa atgagcaaaa caattggaaa
     6961 tacgctcagg aatagagcca tactgcacct ctttatatga ttataaaatg acctaactgg
     7021 tcggataggt gcgaattgta ctcttaaaaa aaactaatgt aactaggttg ttacaatttt
     7081 gtgatctagc tcgcattttt aatgattgta tggttaaaaa agagccatat ttattttcat
     7141 ttaatactta atagttagcc ctatttaaga catttttacc gaatcgagca atatgcaatt
     7201 aattaacaaa aaaaggccgc ttgtagatca cagatcaaca agcggtcttt tttaggcaaa
     7261 aatttgcaaa ttaaacattg aaacggaagt gcattacatc gccgtcttga acaatataat
     7321 ctttaccttc caaacgccat ttacccgctt cttttgcacc ggcttcacct ttattgtcta
     7381 tgaagtcttg gtaagcaatt acttccgcac gaataaagcc tttctcaaag tcagtgtgaa
     7441 tcacggctgc tgcttttgga gcggttgcac ctaccgaaac cgtccacgca cgcacttctt
     7501 ttacccctgc ggtaaagtag gtttgtaagt taagtaaacg gtagcctgca cgaataacac
     7561 ggtttaagcc cggctcttca atgcctaaat cttgtagaaa ttccactttt tcttcgtcat
     7621 caagctcggc aatttccgat tcaatcgctg cacacaccgg tacaaccacc gccccttctt
     7681 tttcggcaat ttcacgcaca cggtcaagat aagggttatt ttcaaaaccg tcttcgttca
     7741 cgttggcaat atacattgtc ggttttaaag ttaagaagtt gtagccctta atagcgtgca
     7801 gttcatcctt atctaaatct accgaacgaa tcataccggc attttcaagc acaggtagga
     7861 ttttttccat aatcgataat tcaaattttg cgtctttatc gccacctttc gcacgttttt
     7921 gtaaacgctg aatggcacgc tcgcaactgt ctaaatcggc aagtgccaat tcggtattga
     7981 tgatttcaat atcatcagct gggtcaattt tccccgcaac gtgaacgatg tcatcatttt
     8041 caaaacaacg cacaacgtgg ccaatcgcat cagtttcacg aatattggct aagaatttat
     8101 tacctaaacc ttcgcctttg cttgcacctg ccactaagcc ggcaatatcc acaaattcca
     8161 ttgtagttgg taacactcgc tcaggtttca caatttccgc caacgcatct aagcgagggt
     8221 caggcattgg taccacaccg gtatttggct caatcgtaca gaacggatag tttgctgcct
     8281 caatacctgc tttagttaat gcattgaaaa gggtcgattt accgacattt ggtaaaccca
     8341 caataccaca tttaaatccc attttttgtt ccttagaatt cccctctccc cttgcgggag
     8401 agggataaat ttgagcttcg ttcagaagcg aaaatgaggg agagggcgaa attgcaataa
     8461 tttcctcaaa tatgaccgct cccctctctc tgaaaaatac ttctgaacga agtatttttc
     8521 ggtctctctc ccacaaggga gagagtttta atttgcttta aaactattta aacggttagt
     8581 tgccttaacc attccgtctt taaataaaac ttctacgcaa cgtgcggctt catcaaccgc
     8641 actattcagt aatgtctgat cgcttggtga aggcttgccc agcacataat tcgccactaa
     8701 gtctttatgc cccgggtgtc caataccaat tcgcacacgg taaaactctt tattattgcc
     8761 aagggcggca ataatatctt tcaagccgtt atgaccaccg tgtccgccgc cttttttcaa
     8821 tttcaccgaa ccgggtggta aatccaattc atcgtgagcg accaaaattt cttccggttt
     8881 aatccgataa aaattggcta acgctcccac tgctttacca cttaaattca taaaagtagt
     8941 cggcactaat aaacggactt cgccttgagc ggtattaatt tttgctactt tgccaaaata
     9001 tttcggctct tcttttaggc taacgttata tattcgggca agttcgttaa tcagccactc
     9061 gcctgcatta tggcgggttt cttcatattt tacccccggg ttcgccagcc cgacaattaa
     9121 tttaatttct gacacaatct tgtctcaatt catttaattt aaaaggcagt attttagaga
     9181 aaaaccgcta ttttctcaag gcaaccatta atcatattgt ctatacggat ttggtacgca
     9241 ttgatacttc gctaacatcg attcagtgaa atcggtgcgt gaagcagcgt tatcattgtt
     9301 taaactaacc acaccaattc gcttgcctct gcaatcccct ttagcaataa aggcaagatt
     9361 ataacccgcc tcacgggtat aacctgtctt actcactaat gcctgatagg attgggaacg
     9421 aaccatactg ttggtgtttt tcatagagaa ataacgacca cctgcataaa cactcactaa
     9481 tggcgaatta gacaattgct gaatttcagg cttacttgcc gcatagcctg ccaatttagc
     9541 aagatcaacc accgttgaaa cattatccga agataagcct gagctatcac caaagtaggt
     9601 ttgagtcata ccgatttcac gggctttgct gttcattcga gccaaaaatt gggctttatt
     9661 caaatgtgtt gcgtgggcaa gggcgtgagc ggcatagtta tcggagcgaa ctagcatcgc
     9721 ttttaacaat tcactacagg caatgttaag atttttcggc aatgggctgg tcgtgccttt
     9781 taagaaatca gcatctgacg gcaaaatttg ggtttggcaa ctcgccccat agcggttttc
     9841 ttctaagaaa acgactgctg tcattaattt tgtgaccgaa gcaatcgggc gaactaaatt
     9901 gaaattctta ccttccaaaa atttcttttg gtttaagtca aacaccacat aagcggaatt
     9961 ttcggttgga atataagcag cggttgcttt aatccgtggt gtgcttttcc tttttgccgg
    10021 ctgggaggaa caggcgctta acaccagagc cgcaatcata acaggaataa attttttcat
    10081 cataatagat tcatcgataa taaagtcaaa gctggttatt ctaccctgtt tccaaaattg
    10141 tgccaaagca agcggtcgat ttttacaaaa tttttgcaaa tctagccgat tttgcaaaat
    10201 ttccgccaaa tttaaccgct tgccctctcg cctcaaatca gcgaaaataa cgcttaattt
    10261 tttggcggac tttccgccct ttttatttta attggttgag aaaaatgtca tacccacaag
    10321 aagttaataa acgtcgcacc tttgcgatta tttcccaccc cgatgcgggt aaaaccacca
    10381 ttaccgaaaa agtattgctc tacggaaatg caatccaaac tgccggctcg gtaaaaggca
    10441 aaggctcggc acaacacgct aaatccgact ggatggagat ggaaaaacaa cgtggaattt
    10501 cgattaccac ctccgtgatg cagttcccgt acaatgattg cttggtaaac ttactcgata
    10561 caccggggca cgaagacttc tcggaagata cttatcgtac tttgactgcg gtagatagct
    10621 gcttaatggt tatcgactcg gcaaaagggg ttgaggaacg caccattaaa ttaatggaag
    10681 tgacccgctt gcgtgatacg ccaatcctaa cctttatgaa caagctagac cgtgatattc
    10741 gtgacccgat ggagctgtta gatgaagtgg aaagcgtgct gaaaatcaaa tgtgcgccga
    10801 tcacttggcc gattggttgc ggaaaattgt ttaaaggggt atatcacctt tacaaggacg
    10861 aaacctactt ataccaaacc ggacaaggtc ataccattca agaagtacga gtggttaaag
    10921 gcttaaataa tccggaactg gatcaagccg ttggcgatga tttagcccag cagttgcgtg
    10981 atgaattaga gctggtacaa ggcgcttcgc acgaattcga tcacaccgaa tttatcaaag
    11041 gcgagctgac accggttttc tttggcactg cactgggtaa cttcggggtc aatcatttcc
    11101 ttgacggttt aaccgaatgg gcaccggcac cacaagcccg tcaatcggac gaacgtgaag
    11161 tttcaccaag cgaggaaaaa ttcagcggtt tcgtatttaa aattcaagcg aatatggatc
    11221 cgaaacaccg agatcgagtt gcttttatgc gtgtcgtttc aggtaaatat gaaaaaggaa
    11281 tgaagcttaa acacgtccgt atcggcaaag atgtggtgat ctccgatgcc ttaaccttta
    11341 tggcgggcga ccgttcacaa gccgaagaag cctacgccgg cgatattatc ggcttgcaca
    11401 atcacggcac gatccaaatt ggtgatactt tcacccaagg cgaaaatttc aaattcaccg
    11461 gtattccgaa cttcgcccct gagctgttcc gccgaatccg cctgcgtgat ccgctcaaac
    11521 agaaacaact gctcaaaggc ttggtacaac tttccgaaga gggtgcggtg caagtattcc
    11581 gtccgttaat caacaacgat ttgatcgtgg gagcggttgg ggtgctacag tttgatgtgg
    11641 tggtttcacg gctgaaaacc gaatacggtg tagaggcaat ttatgaaacc gtaaacgttg
    11701 ccacagcccg ttgggtcgaa ggcaaagatg ccaaaaaatt tgaagagttc aaacgcaaaa
    11761 acgaggcaaa ccttgcccta gacggcggag acaacctcac ctacattgct ccgacaatgg
    11821 tgaacttaaa cctcgcccaa gaacgttacc ctgacgtaca gttctttaaa acgagagagc
    11881 actaaaacca ataggggcga aaaatctttc gcccctacaa ataaagcaca agcggtcaat
    11941 tttttttccg aattttacaa tactaggcat tctgttcctc aaatagccta aatattcccc
    12001 tatcaacaat ccttatcttg agattattct gcctattaat taaccactca aaaataccct
    12061 cgcagaaaac tctacttttt ttatggaaat atgctaaagt tcgccaatat tcatagccct
    12121 gattttttta tggagaaaat aaaatgaaaa aatggttgat tccattaact gtcgcagcgt
    12181 tctgtgtttc tgcttgcgat gataagaaca gcactcaagc aaccgcagaa aaaccgcaag
    12241 tagagaatac tcaatcgcaa aaaaatgcgg aaatattacc gcttgcaacc gtggttgccc
    12301 catgggaaat caatagcctt gacccgaatc aatcaggcgt aattttccag cgtatgaact
    12361 tagcggaaac attggtcgaa gccgatctta acgggaattt aattccggca ttggccactg
    12421 actggcgcag taacgaagag ggaacaatct ggcgttttac cttgcgtgaa ggggtaaaat
    12481 tccataacga tcaagtactt accgcacaag cagtggtaaa tagtttgaat atcgcaaaaa
    12541 gcaaaccggg tgtgttagca aaagccttta tcaaggaaat tcgagcggta gataacaaag
    12601 tggaaattga gctaactaaa gcttttgtgc cgtttcctcc ctttttaaca cactacaccg
    12661 ccttaatttt ggcacctgaa agctataatg aaaaaggcga agtgacccaa attatcggta
    12721 caggtgcgtt taaacccaca aaaattgaag ctccgcagaa attggaagcg gtgcaatttg
    12781 agggctattg gggcaaaaaa ccgcaagttc agcaagccaa ttatttagcc agcagccgta
    12841 gcgaaacccg tatgttaatg gcacaaagcg agccgtcatc actggtattt aatttagata
    12901 ccgccagtgt agcaaggctg aaagccgatc ctaacctgca attagtcagc ggatctattg
    12961 cccgtactat tcagttgaaa atggacgtgg caaagccgtt ttttaacgac ttagcgattc
    13021 gccaagcctt atcgcaagcg attaatcgca aggcgattgc tgagcaggtc ttaaaaattg
    13081 agaacggagc tgccgatcaa attttaccga aagcctttgc cgactggcgt gttgataccg
    13141 cagaacaagt ggtcgatatt gcaaaaatta aacaaaatct gaccgcttcc ggctatacct
    13201 ttgatgaaca aggtcgctta accaaagacg gcaaaccgtt tagctttacc atgcgcacct
    13261 tctcagatcg tcctgaatta ccggtgattg ctactatctt acaagctcaa tggaaacaaa
    13321 ttggcgtgga agtgaatgtt tcggtgggta atttcagcga aattccggcg gggcatcaag
    13381 acggcagttt agaaatggct ctttatgcct taaattatgg caaaacctta gatccatatg
    13441 gcgtaattgc ctccgacttc gccaatggtg gcagtgattg gggggtaatg aattggcaaa
    13501 atactgaggt agacaatgca gtcaaatcgc tcgaaaccga gcgtgacccg caaaaagcga
    13561 aagcattaaa gcaaacggtt agcaaaatta tttacaatga tttgccaatc attccggtgg
    13621 tttattacca acaaaatgtg gtggcacata aagaagtaaa aaatgtgacg ctagatccat
    13681 ttgaaagacg cttctttttg gagttattaa gtaagtagtt taattcaaaa tactcctcgc
    13741 tttagaaaag ggaaggtagg atttttcagt agtaatttgc gctcttaggt gaataaatag
    13801 tgacagaatt atcgtttttt ctcatttttc acctattttc tccgcttatt tcttctgcca
    13861 aatcttccct tcccctcttt gctaaagagg gggatcagaa cgcataaaat catcttttta
    13921 ataaatgaaa taatacaatg cacaaaattc tcttccgccg tcttatccaa attctactgg
    13981 tgatttggtc ggttggcaca ctcacattta tcctcacccg ccaactttcg ggtgatatgg
    14041 cataccgcat tgctgccagc cgctatggtt atgatcaagc agatagtgct gctgctgagg
    14101 ctgtgcgtgc cgagctggga ttagaccaac cttggtggca aagctacttc agctggctaa
    14161 gtgacttggc tcaatttaat ttaggcaaat cattggtgac cggtgatccg gtctggtctg
    14221 aaattcagca ccaattcggg cataccttaa gccttgcgat tgtggcactt atcttagcaa
    14281 tccttatcgg gcctccgctc ggtttgttag ccgcccgtaa gccaaacggc ttttttgacc
    14341 gcttgacact ggtattcagt accctgtttc gctccgtgcc ggcatttatt attgcgattg
    14401 gcttgattac gctgttttcc gctcaactaa aatggctacc tgccggcgga tacggctgtt
    14461 ggcaacattt tatcttgcct gccttaacgc ttgcgattgg cttgagtacg gtttcggtac
    14521 gagtcacccg ttctgcaatg gttcaggtaa aaggctcaga attttaccaa ttttcacaat
    14581 taaaaggctt aagccgttgg catacctttt tacgtcacgg tttgccgaat attgccgtgc
    14641 cggtcattgc ctaccacgca gtacaattag tttatttaat tgaaggcgtt gtggtggtcg
    14701 aaagcctatt tgcttggccc ggcagcggac acgcactggt tcacgccatc attgcccgtg
    14761 atgtgccgat gattcaaggt acaacgctcg tgatgggcgg attgtttgtt gtattaaaca
    14821 ccattgccga tctattaagt gcttggattg acccacgaat taagcgatag gacatcaaga
    14881 tgaaaatttc aatttcacaa tatttaggcg gcactattct ccttgcaatg ttgggatttg
    14941 cctttttaca gccttatttt tacccgatgg atattggctt tcaagattta accaatatcc
    15001 tttccaatcc aaatgaaatc gcttggttcg gcaccgatca tctcgggcgg gatatgcttg
    15061 cccgtcttgc ctctgctatt cgtctttcgt ttggcttatc actgtttagc gtgatttgtg
    15121 ccttaattgc aggcttaatt accggcatta tggcaggctt tttcggtggc tggattgacc
    15181 gcattttcag ctttatttgt gatctagtga tggcactccc cggcttactt ttagtattgc
    15241 tctttgccgc cctttctccc ggctcatttt ggacgctcta tttagggatt tcattggtaa
    15301 tgtgggtgga atttttccgt gtgatccgct ctatcagttc aacaatggca aacagctcgg
    15361 aaattcaagc ctcacgccta atgggaatgg gctggtttta tagcttcaaa cgccacttat
    15421 tgccccgttt attaccgatg attgccactt tatcggcatt ctcgctcggc aatgcgattt
    15481 tagctctcgc cacacttggc tttgtcagcg tagggcttcg cccgcctaca gcagaattag
    15541 gcttgatgat gaccgaacta ttcccttact actacgaagc accgctgata tttttgcaac
    15601 cagtggttgc cgttttctta atggtactca gcttacaatt attgtctaga aaaattaaat
    15661 aatgcgtagg ggcaggtcct gtgcctgccc aaaattctta ttatatttat gggcgggcac
    15721 agggcccgcc cctacagtaa taaaatgaag atgaaattac tcgatatcca aaacctatct
    15781 gttgaaaccg aaaacagatt acagctggtc gaaccgatta gcctacaatt aaaggcagga
    15841 aaaaatatta ctatcttagg cgaaaccggc tcaggcaaaa gcctgctgat tcaagcgatt
    15901 atgggggcgt tacccgacgg cttaatcgca agcggtgaaa tttcggtaaa aaattgcaaa
    15961 atttccaccg aatccgaccg cttgcaaaca ttgtggggta aaaccttggt aatgctgcca
    16021 caagagcctc gccgctcgct taatccgatt atggcaatcg gcaagcagtt gtgggaaagt
    16081 tttcactatg tggcaggcaa accatcatct caagccaaaa cggaaagcaa agcctattta
    16141 gccaaacttg ggctgggcga atcggttgaa aactacccac accagctttc cggtggaatg
    16201 gctcaacgtg cctcttttgc gattgcaact gccgccggtg gcaaaatttt acttgccgat
    16261 gagccgacca aagggcttga cccaatcagt aaaggcaaag tgattgaact gttaaaatcc
    16321 gcctaccaaa acggtggagg cttgctcacc attactcacg atattgaagt tgccgagcaa
    16381 ctcggtggca ctattttagt gatgaaaaaa ggcgaactgt tggagcaagg tgaggcaaaa
    16441 gcgttgttaa ataacccaca acacccttac accaaagcac ttatcagtgc cgatccaaaa
    16501 cattggcaac cattgcaaga tctgcaaaat ttaagccaaa aacaaccgct tgtttcggtt
    16561 aaaaatttga gtattgcccg tggtaagaaa acgctgttta gcaacctttc ctttgactta
    16621 cacaaaggcg aagtgcttgg gattgtcggg catagtggga ttggcaaaag ctcgcttgcc
    16681 gatgtacttt gtggtttgct taagccgaaa tcgggcgagg ttgtgtggca cagccacagc
    16741 cataaaaaac accaagtgtt gaagctttac caagacccac cggaagcctt tgctccgaat
    16801 gtcagtctaa aaaccttgct tgatgatgtg attaacaagc accaattaga tcgactgccg
    16861 attccaagtt tactgcaaca actttcgctc aacccagaaa ttttgcaacg caatgcggaa
    16921 aatgtctccg gcggcgagct acaacgagta gcaattttgc gagccttgct cttagaaccg
    16981 gtactactgt ttgccgatga agtcacttct cggcttgacc caatcacaca acaagaaacg
    17041 atagaattgc tgatcaacca gtgccgagcg agaaattgca gtctgatttt ggtcagtcac
    17101 gatccttatc taattgagaa atcgtgcgat aaagtgatta atttggaaga gtatgtgggc
    17161 taacaagcgg ttcaatttct gagatttttt gcggctctaa aaacaaaaat gcgaagacat
    17221 cagttcttcg catttttctt acttattcct tattgcccag ccagcttctg ccgtacaatt
    17281 tcaaacagac agaccccggt tgcaactgag acattcaaag aagatactga gcccgccatt
    17341 ggaatgctga taagctggtc gcaatgctca cgggtaaggc gacgcattcc gtcgccttct
    17401 gcccccataa ctaacgcaat cgagccggtt aattttgctt cataaatgcc cgattccgcc
    17461 tcacctgccg tgccgacaat ccagacatta tgccgttctt gtaaatctcg cattgtgcga
    17521 gccagattgg taactcgaat cagtggcatc acttccgctg ccccacaggc gactttgcga
    17581 gcggttggtg taagctgagc agatttatct ttcggcacaa taaccgcatc aacccctgcc
    17641 gcatcagcgg tacgcaaaca agcccctagg ttgtgagggt cggtcacgcc atctaaaatc
    17701 aacaagagtg gatttttctt ttggcttaag atcgcctcta aatcgtgttc attcagctct
    17761 ttttgtggca cgactctggc aataatccct tgatgcactt caccttgcga tttgttatct
    17821 aaggtttggc ggttcacttg ttgaattgcc acccctaaac gttgtaattc atttaatagt
    17881 ggcattaagc gtttatcttc acgccctttt agcaccagca cttcaattaa acgctcaggt
    17941 gcattatcca aaaaggcttt cactgcgtga atgccataaa tttgttcgct catattttat
    18001 ccttaataat tgggcgaacc catcagctcg cccatataaa tacctaacta aagcaacatc
    18061 ttcacaattt tatccaactt aaccctgccg aattttttca gcaatttacg cacattttca
    18121 gggtaatcgg ttaaaacttc caaatcactg tagtgagtta aaatctgcgt atgttggcaa
    18181 atttggttta actccgtttc tgctttttca cttaattgat gttgaggatc ggaaattaaa
    18241 attgcatttt cggcatctaa ccgccacgct cttgggttaa ggttattgcc ggtcagcaaa
    18301 atatagcggt tatccaccca aacccctttt aagtggtagc tgttttcgcc atctttccat
    18361 aagcgaatgg ttaactgttt attttgtaca taaccgtcca accgttttgc aaaggctcgt
    18421 aagttctttt catacaaata aggcagagcc gatgccatcg tgaatttttc gtccggcttg
    18481 gtgtagaaat cattagcggt tttatccccc acaataattt caaccgattt gccgtttgcc
    18541 aatagccatt caatacgggt tctcagagaa tgcggaaaat taaaatacgg agtgcaaatc
    18601 gttaatttct gctcagtttg ataaaacaac gcttcaatca ctttatttaa ctgattctta
    18661 cgtcgcccta agcctactaa aggagaaacc gctaagcgac cattttcagc aacaccgtta
    18721 aataaatacg cttcccgact taattgtttg cggaaatgct taatttgcgc acgaatttca
    18781 gccgttttcg ggcgattttc cgtatctaaa cgttttaccg cttcattggt taaaagatgc
    18841 tgttgaataa acgtcaccca gctatcggca agaactttat tttcaatgac gtggtaacgg
    18901 tcataacggt aacgttcaaa ttgatgcaaa tacacattat taatgcttgc tccgctatac
    18961 aaaatcgtat cgtcaaatac gaagcctttc aaatgcaata caccaaacac ttctcgtccg
    19021 ttaatcgaca caccgtaaaa ggcaatctct tgccctgccg gtaaaccttg ttcgtattta
    19081 acttttgcat accagtcggc gttagataaa ttctctgcct caccaatacg cccacgttgg
    19141 gctcggtgcc aatcaaccaa aatgttaatt tccagttcag gattatttcg cttcgcttga
    19201 tataaagcag ctaatacttc ctgcccggct tcatcttttt caaagtaaag agcggttata
    19261 taaatacgct tttttgccgt ttgaatcagc tgtaaaattt gttgtttaaa cgctttgctc
    19321 gaggcgagaa actgaacctg ctctgccact tgtggtaagt atggcaggct tttcaatagg
    19381 tattcagctt tacgttgttt gttcaaaatt aacatcattg attccaaaat tttcaatcgt
    19441 tgcctgctat tttacactga aatcgccaat aaagcgattt tcgcttaacg gcattgatag
    19501 ctggtcaaac gattaggatc ttctccggtt tgataaattg cgactttcgg ataagcacaa
    19561 agcgggatct gcttggcttt attagggtaa agctcaccgg ctttggcggc aatactttcc
    19621 ggctccagtc ctttctcaac ccaattttca agggcagtga gcatatcaaa atcattcacc
    19681 gttgcccctc gcccacaatg gttcattgcc gacacgaaaa acaattttgc aaaatgttgc
    19741 ggattttcga ccgcttgttg taggctttga taccaatttt tgagatcaac tgccgaaaaa
    19801 atcgggtctg aaacgccttg ataaatcagc attttgccac cgttctgctt aaaagcggat
    19861 aaatcaactt gatctgtatc gtgaatgctc cctaccgctt tcacttgttc gctggcttga
    19921 tccaaatcta cgctgagtgg atcacggctc ggcactctgg gggctaaata gtaatgggtc
    19981 aaacttttca atcccatttt aaaactaatg ctgttgggct gagcggtttg gctatcacct
    20041 aatttccaat cccgccagcc tttagcgtta atgccggaat catacgccca agggctataa
    20101 atcagctcgc ctcgactgtt tttcgccccc tcgaaaatcg ttttgattaa agcgactttt
    20161 ttctgcccca gttgctttgc caccatttcc ggctggaaat cacactgttc ccacgcatta
    20221 attaaaccgt ctgctaagcc gtctaactta tcgcaacgtg ttaatacgcc attggcaatc
    20281 acatctaaat cttgttgagt gagggcttgg gataaaattt tgtcgccatc accattcttc
    20341 ggagcaactg ccaacaaggc tcgattatcc catacttccg ccaagactga acgggaaacc
    20401 cgaaagccgg ggctgcctgc aatcacaccg tcaaattcct gtggataacg cattgccgcc
    20461 atcatcgcct cacgaccacc attcgagcag cccataatgt aattgtgctt gctcggtttt
    20521 cggtaaaatt cggcaatcaa ctgcttggca accgtggtca ctttgccgat agaggcatag
    20581 gcataatttg agcgagcttc gggatctgcg gtaaacacta aatctcgagt ggcgtgacca
    20641 ctgtcgttac tcactactgc atagcctctg tttaagccat ttgcaccact cgccccgtgc
    20701 ggatagagct taccaatggc agggaaaatc accccaccta caccgcccgc cccctgaaat
    20761 aagaattttt cattccattg ttcgggtaaa cgtagctcaa attgaatacc gtaaggaaca
    20821 ttatccacct ccacccgttt tccaatttca ccttgtacta aacagtaagc cggcaactca
    20881 gcagatttct caacccattc agctttataa atagccgttt tttccggcga gttagatttt
    20941 aacgcgacac attgttcagc catagaatta gccaaagcag tgtgagaaaa aacggagaga
    21001 aaaataaaaa gaaaagcgat tattttcatc atttacatca atacaagcgg ttatttttcc
    21061 gaaaattttt gcaaatttta aactgagtgt ctatctatcg ctggaaaagc taaggcagag
    21121 tttcctctgc cttagaaaga tgaattgaat tacattttaa gcaaacaagc gtttttcgcc
    21181 ttcgccggct acgttttcca cacaacgtcc gcaaacttct tcgtggccag agtgcgagcc
    21241 gatgtcggta gcataatgcc agcaacgagg gcatttctca ccatctgcat tttccacttt
    21301 tactgcgagt ccggctaatt cgccttccgc aatatctgct tccgccagtg gtttaacaat
    21361 cgcttgtgag gtaatcagca caaagcgtaa ttcattgcca agttgttcta ataacgggcg
    21421 aatttcatca ttggcgaata ccgtcacctt ggcttctaag ccagcaccaa ttactttgtc
    21481 tttacgggct tgttccagca cacggttgac ttccgcacgc acttttaaga tttgttgcca
    21541 gtaagcatca tctaatttat cttgctcggt taaaccgaat aatccggtgt agaattcttc
    21601 ggtaaagaca aattcacttc tgccttccac ctgcggtaag tagccccaaa tttcatcggc
    21661 tgtgaaggat aaaatcggtg caatccaacg tactaacgct tctgcaatat gccataacgc
    21721 tgtttggcag ctacggcggg caaggctgtc ggctttggtg gtgtattggc ggtctttgat
    21781 aatatctaag tagaaagacc ccatttcaat cgagcagaaa cgcattaaac gctgtactac
    21841 cgtgtggaat tggtagttat cataggcttc tttgatgtcg ttttgagcct ctaaagcaca
    21901 agccaccgcc cagcggtcta aggcgatcat ctcttgcggt tgaactaaat cactttttgg
    21961 atcgaaaccg ttcaagttcg ccaataagaa acgggctgtg ttacgaatac ggcggtatga
    22021 ttccccggca ctgtttaaaa tattgtgcga aacggtaatc tcaccggtat agtcggtgga
    22081 ggcaacccat aagcgtaaaa tatctgcacc gtttttgttc cacacttcac ttggcacaat
    22141 tacgttgcca agcgatttgg acatttttct gcctttctca tctacggtaa aaccgtgagt
    22201 tagcacttgt ttgtatggtg ctttgccgtt agtagcagtg gaaagcatta aagatgacat
    22261 aaaccaacca cgatgttggt ctgaaccttc taaatacata tccgctgaat tgccgttaaa
    22321 ttcagggcgt tgttctacaa cagaggcata ggtcgatcct gaatcaaacc acacgtctaa
    22381 ggtatccggc actttgcggt aatctttggc ttcttcaccg agcaattccg caggatctaa
    22441 atcccaccac gcttgaatgc ctttttcttc tacacgtttc gccacttctt caattaattc
    22501 taaagtgcga ggatgtaatt cttcggtttc attatgcaca aacatcgcca ttggcacgcc
    22561 ccaagtacgt tggcgtgaaa tacaccagtc tgggcggttt gccaccatcg tatcaatacg
    22621 agcttcaccc cagcttggga tccaacgcac cgatttgatt tctcctagtg cttgctggcg
    22681 taagccttgg gtttccattc cgataaacca ttgtggggta gcacggaaga taatcggggt
    22741 tttgtgtctc caacagtgcg gataactatg cttgatgcgg gataatttta ataatgctcc
    22801 cacttcttgt aatttttcga ctactttatc gttggattca aacacaccta agccggcaaa
    22861 gaacggggtg tctgctttga atttaccgtc attggaaatt agccctgcca tttcaatgtt
    22921 atatttgcga gcgaccacga agtcgtccgc accgtgatcc ggtgcagtat gcactaaccc
    22981 tgtaccaccg tctgtggtaa cgtggtcgcc aaaaataaat ggcacgctgt aatcatagaa
    23041 tgggtggtta aagcgtaata attctaagtt ttcgcctttg gtggttgcta aaatctcagc
    23101 agattcaacg cctgctgctt ttgcaacatc ttcgactaaa tcgaccgcta gtaacacacg
    23161 ctcatcacct aattggacta aggcatagtc taattcaggg ttgatcgcaa tcgcacggtt
    23221 agacggaata gtccaagggg tagttgtcca aataaccgca gataatgccc ctctaccttt
    23281 accctgtgcg ttgaattttt cttctaccgc atttacgtcc acagcattaa aacgcacata
    23341 aatagaggga gaaactttat cttcatattc cacttcagct tccgctaacg aagatccaca
    23401 atctaagcac caatgtaccg gttttgaacc tttgtataaa tgcccgttcg caatcacttt
    23461 gccgagcgtg cgaataatat tcgcctcagt gttaaaattc attgttaggt atgggttatc
    23521 ccaatcacct aaaataccca tacggataaa atcggctttc tgaccttcta cttgttcttt
    23581 cgcatagtca cggcacgctt ggcgaaactc ggcagccgaa attttctcat ttggtttacc
    23641 aacaatccct tctactttca gctcaatcgg caaaccgtga cagtcccagc ccggcacata
    23701 aggggtatcg aaacctaatg cggttttcga tttcaaaatc atatctttta aaattttatt
    23761 cactgcgtga cctaagtgaa tattaccgtt agcatacgga ggaccatcat gcaaaataaa
    23821 ggttttcttg cctttcgagg cagtacgaat tttttggtat aaatttttgt cataccaatt
    23881 ttttaacata tcgggttcac gtttcgcgag atccccacgc ataggaaagc ctgtttcagg
    23941 caagtttaag gtgtttttgt agtcaatagt cattttttta tttctcgtta aaattatctg
    24001 ttttatgcct agcacggcat agccgtacta ggttaagcat agctcagccc ctctggggct
    24061 ggaaactaga aaggctcacc ttgcaaattc cttaaaaaat tcaaccgctt gcaagcgatc
    24121 tttctcaatc tgggctttta gtgcttcaaa gtcgggaaat tttatttcat tgcgtaattt
    24181 ttttaaaaag atcacttcaa tcgcctcacc gtaaatagag gcattgaaat caaaaatatg
    24241 cacttctaat aacggcttag taccgttaat ggtcgggcgg ttgccgacat tggcgattcc
    24301 gttaaaactg ccctgtttgg tcttcacttt taccgcaaat accccttgaa tcggcgtaac
    24361 caaacgattg agcataatat ttgcggtagg aaaaccaatg gttctgccga gtttattacc
    24421 gtgtgcaacg cgtcccagaa tcgaataagg cttgccgagt aatttctctg ccaaatctaa
    24481 ctcattgttt tgtaaggctt ctcgcactaa tgagctgcta attctttctt cgtttaagct
    24541 atgggtatgg ctttcttcca ccgcaaagcg atattttaag ccggcattgc gtaaagtttc
    24601 aaaactgccc gcccgttttg ccccaaagcg aaaatcatcg cctacactta aatagcgtac
    24661 tttcagtctt ttagcgagca aatcgctgat gaaatcgtct gccgaaattt gagcaaattt
    24721 ttcactaaaa cgcacgcata gcacaaaatc cacaccggct tcttccaaat attttagctt
    24781 atctcgcagg cgcattaagc gggcgggcgg gttacaagcg gttgaatttc cacttttttt
    24841 tgcaaaaaac tctcgaggtt gtggctcaaa taacatcaca actgagggca atcctaaatc
    24901 taaagctcta tcacaaagac gagccaaaat attttgatgc ccaagatgca caccatcgaa
    24961 attcccgata gagagaacac agccttgatt taaagcgatg tgtttgtcta agttgtggaa
    25021 acctcgaata agttgcataa aagataaacc attttataag tgaaaattgc tgtgattata
    25081 acgagaaatc tacaaaaaag gaaaaaaatt caatctgtta tattttttta gtgctgaaag
    25141 tggtcgtgta gctaattatt aaagcaaaga tatgctataa aactgctatt tatacaataa
    25201 aaatatattc aaatgctaca ttttactata tgataatcat caaaaaatcg agggaatcat
    25261 tatgacagat tttgcttatc ttcaacaaaa gcgcaaacag cttaaactca aagtgaatga
    25321 tatttgtgaa caagctgggg taacccgagc ttattttaat cagttagtaa gcggaaaaat
    25381 caaaaatcca agcgccaata agcttaaagc cttgcattcc gttttagata tcgtagaaga
    25441 tagcaaccag cgttccgggg ttatttttgg caaattctat cctattcaca caggtcatat
    25501 taatatgatc tatgaagcat ttagtaaagt agatgtttta catgttattg tttgtaccga
    25561 ttctgaacgg gatttacgtc ttttccagga aagtaaaatg aaacgaatgc cgacaaatga
    25621 agatcggcta cgctgggtac agcaaatttt taaataccaa caaaaacaga tctttattca
    25681 ccatttagtt gaagacggta ttccgagcta tccaaatggc tgggaagatt ggtctggtcg
    25741 tgttaaagcg ctatttgaag aaaaaagcat taatcctact attgttttta gtagtgaaat
    25801 tcaagataaa gaatcttatg aaaaatattt gaatctagaa gttcaacttg tcgatcctac
    25861 tcgtgaatcc tttaatattt cagcaacaca aattcgtaat aatccttttc aatactggcg
    25921 ctttattccg aaagaagttc gtcctttctt tgttaaaact attgcgattt taggtggtga
    25981 aagcagtggt aaatcagtgt tggtgagcaa attagcgaat gtatttaaca ctacctctgc
    26041 ttgggaatat gggcgtgagt ttgtgtttga gcaacttggt ggcaatgaac aagcaatgca
    26101 atattccgac tatccgcaaa tggtgcttgg acatcaacgc tacgttgatt atgccatgaa
    26161 acatgctcat aaagtggcta ttattgatac cgattacatc acaactcaag cgttctgtat
    26221 tcagtatgaa gggaaggctc acccgtttct ggattcaatg atccgcgaat atccttttga
    26281 tgtgacgatt ttactttcta acaatacaaa atgggtagcc gatggtttac gcagtttagg
    26341 atcgaaaaaa cagcgtcaac agtttcaaca cctactgaaa aaactactag aaaaacacca
    26401 tattccttat attaaaattg aatctccaag ttatttggat cgctacaatc aagccaaaga
    26461 ggtggtagaa gctattttaa atgaagaacc aatcccatta cagtttaagc aatataatat
    26521 tcacgaattt gaataactgc cacaggaaat aacatgatac tttttgcagg cgatccacac
    26581 ggtagctacg agcatcttta tccgattcta caacagcaga cggaggaggt agctttagtt
    26641 attctaggcg atcttcaatt gactactcct gatgaattag atcggctttc gcagtattgt
    26701 gatatttggt ttattcatgg taaccatgac agtaaaaccg ttgctgcctt tgatgctatt
    26761 tggaatagta gctggaaaga acgcaatatt cacggtaaag tagttgacat tcaaggaata
    26821 aaaattgcag gtattggagg ggtcttccga ggtcatattt ggatgccgcc caatcgtcca
    26881 atgttttttg atcccatcca tttttgccaa tactctgctc cggaaaaaat ttggcgtggt
    26941 ggtattccat taaggcaccg ctcttcgatc ttcccttctg attttgaagc attggaaaat
    27001 gaaaaagccg atattttaat tacacacgaa gcaccaaagc cacaccctca aggcttctct
    27061 gtaatcaacc agctagcaag aaaattaggg gcgagcaaaa ttttccatgg ccactaccat
    27121 gataatttta attatggcaa tctaaatgtc agcagagaat gtgctattta taatatcggc
    27181 tttcgtagcc tagcggatat taatggaaat tatctaattt taggtgttga tgatcgagag
    27241 aaatagccaa aaatttgact gaattaaaca aattgtcatt ttacccttcc cattcataaa
    27301 tttataagta aaatgcgaga aatttgtaac ataaacgtta ttaaacagaa tttataaatt
    27361 aaatcagagg tttaaaagat gaagatccca caaatcttaa ttgttgagga tgagttagta
    27421 acaaggaata tgctgaaaag catttttgaa ggagaaggat atcaggtatt tcaagcatct
    27481 aacggcgagg aaatgcactc tgttctgagt acaaatgaaa tcaatcttgt gctaatggac
    27541 attaacttac cgggaaaaaa tggattaatt ctcgcccgag aaattcgaga gaatatgaag
    27601 ctaccattaa tgtttttaac cggtcgcgac aatgaaattg ataagatcct cggtttagaa
    27661 ataggtgccg atgactatat cactaaaccg tttaatcctc gagaattgac tatccgagcg
    27721 agaaatttat tgcaacgaac gatgatagat aaagaaaacg acgttgtaaa agagcaatct
    27781 gaaattgaaa gctatcgctt taacggttgg atcttagaca ttaacagtca tagtttaatc
    27841 tcaccagaag gtgaggtaaa taaattacca cgtagtgaat ttagggcttt attacatttt
    27901 tgccaacatc ctggaaaaat tcaaacacgt gaagatttat tgaaaaaaat gaccgggcgg
    27961 gaactaaaac ctcatgatag aaccgttgat gttactattc gccgtattcg taaacatttt
    28021 gaagaccacc ccaatacccc agaaattatt gtcaccattc acggtgaagg ctaccgtttc
    28081 tgtggtaaca tcgaacctta atcaagatag gagtaatttt atgaaaaaat taactattgt
    28141 cgcattaact tgcttatttt ctacccatct attagccgct cctgtcggaa atacatttac
    28201 tggcatcggt gtcggtgtag atgtaactac aacaaaatac aaagttgaag gagtaaaagg
    28261 caaggattcc acaggtccgg cattagttgt cgattatggt attgagcaag gcaataactt
    28321 tgtaggcgtt gtacaaggaa aagcaaaagt aggtagtaca aaagtattta gcgatgtaaa
    28381 acaaaaaaat aaatatacta tagcttatca acaaggttat cgtgttggat ccgatttatt
    28441 accttatgta aaagtagatg ccagctcaag caaaatcggt aatgaaacct atcgtggctt
    28501 tggtttcggt gctggtgcaa aatatgcagt ttcaagcgat gttgaattag gtgcagaata
    28561 cactcgcgat aatttaaaac gtagcggcac aaaattaaaa ggtaacgctt tcaccgcgaa
    28621 tgcaacttat cgtttctaat cttagcggta aagttttctg aaaaaataac cgcttgtaac
    28681 acaaaagagc ctgaagtgat tcaggctctt tgccttttaa tataatactc gggctcgaat
    28741 cgtgccttcg atcgctttta aacgttgtaa tgcttcatca acattgtcgc tctctacatc
    28801 aattacaaca taaccgatag ctgcatcggt ttgtaaatat tgagcggcaa tattcacatt
    28861 tgattccaca aaaatctggt taatttgatt taacatacct gggcgattct cgtgaatatg
    28921 taataaacgt ttggtattag tatgaagcgg taaggatact tcagggaaat tcactgccgt
    28981 cacggttgaa ccgttatctg aatatttcac aaatttattg gcaacttcgg tgccgatatt
    29041 tgcctgagct tcagaggttg aaccaccaat atgtggcgtt aaaatcacgt tatcaaactt
    29101 gcacaatggt gacacgaacg ggtcattaat tgatgccggt tcttccggaa atacgtcaat
    29161 cgccgcacca cgcaatgagc cgtcttcaat ccgagcggct aatgcgtcta aatcgaccac
    29221 tgtaccacga gcggcattaa ttaacaccga gccttctttt aattgagcaa tgcgttctgc
    29281 actcattagg tttttagtcg agtcgatttc cggaacgtgt agtgaaatca tatcgcaggt
    29341 tgaaagcaaa tgctctaatg tcggcacttg ctgtgcatta ccgagtggta gtttgttttc
    29401 aacatcatag aaataaacct gcataccaat ggcttcggca agaatactaa gctgtgaacc
    29461 gatatgacca tatcccacaa tacctaattt cttgccacgt acttcgtttg cacctgctgc
    29521 cgatttattc cacaccccac gatgcacttc cgcatttgca gtcgggactt tacgcattaa
    29581 taaaatcatc tctgccagca ctaattctgc caccgagcgg gtatttgaga acggtgcatt
    29641 gaataccgga atacctcgtc ttttcgccgc attcaaatca acttggtttg taccgataca
    29701 gaaacaacca atcgcaatta atttcggagc ttgagccagt acttcttcgg ttaaaaaagt
    29761 acgcgagcga ataccaacaa agtgtgcatc tttaattgca tcaattaatt cttgaccgtc
    29821 taatgctttt ttatgcactt caatattggt ataaccagcc gctaagagta catcaattgc
    29881 gttttgatgt acgccctcaa gcagaaggaa tttgatcttg gatttatcca aagaaatttt
    29941 agccattttt tgctcctaag tatttgtatt tgcaataata aattattcta aaataactgc
    30001 accttcaggt gtgccgacaa tggttacatt ggcaaaacgt tgtgcaaaaa taccgttagt
    30061 caccacgcct gcaatattat taatggtatg ttccattttc aacggctcca taattttaaa
    30121 gttatgtaca tctaaaatca cattgccgtt atcagtgacc acgccctcac ggtattccgg
    30181 cgaaccacct aaggctacga gctgacgagc cacataagaa cgagccattg ggatcacctc
    30241 caccggcaga gggaaagttg aacccagcac atcaacttgt ttggatttat ccacaatgca
    30301 gataaatttt ttcgctaatg aactcacgat tttctcacgg gtaagtgctg ccccgccacc
    30361 tttaatcatc gccccttgtg gcgtgatttc atcagctccg tcaatataca catctaattc
    30421 cgtcacttca ttggcactga atacttcaat gccgatatca cgcaaacgct gttccgaggc
    30481 tttagaggca gcaaccgctc ctttaatctc atctttcatt gaagcaaggg catcaataaa
    30541 acagtttacg gttgaaccac ttcccacccc aacaatagtg tccggtttta caaattttaa
    30601 tgcagcttgt gccgcaattt ttttcatttc ttgttgatcc atttttacct ccacttgtag
    30661 ggcaaatcat catttgccca cttcggcaag gcgaaaaaaa ttttcgccct actacatcta
    30721 ttctacacat atatgtaaca agcggtcata tttggcaaat tttttaccaa aaacgaccgc
    30781 ttgtcattag ttacgtttta ctgcttcaac aatctcttcc gcacagcttt gagcaagtac
    30841 agcatcttcg cactccacca tcactcgaat taatggctca gtgcctgatt tacgcaataa
    30901 aatacgccct ttgcctgcca agcgtttttc cacatctgcc gctaccgctt tcacttcgtt
    30961 actttcaagc ggatttgccg cccctttctc aaagcgaaca tttagcagaa cttgcgggaa
    31021 cagaggcact gcttttgcca aatcattcag gcttaatttg tggcttgcca ttgctgctaa
    31081 tacttgcagt gaggcaataa taccatcacc ggtggtgttt ttatctaaca cgataatatg
    31141 cccggagttt tcgccaccca gtttccagcc tttttcttta agctgctcta gtacatagcg
    31201 gtcacccacg ttagcacgag agaatggaat ggctagctct tttaaagcta attccaagct
    31261 catattactc attaatgtac cgactacacc gccttgtaat ttgcctgaac gtagagcttc
    31321 tcgggctaaa ataaatagaa tttggtcgcc atcaacttta ttgcctaagt gatcgaccat
    31381 aatcaaacgg tcgccatcac catcgtaagc tagaccaaca tccgcacctg cttctaccac
    31441 cactttttga agtgctttaa tatccgttgc accacatttt tcgttgatgt ttaaaccgtc
    31501 cggcttagta ccgatttcaa gcacttctgc ccctagctca cgcattacat tcggcgcgat
    31561 atggtaggtt gcaccgttgg cacaatccac cacaatttta tagccttcaa ggcttagttc
    31621 agacgggaaa gtgcctttac aaaactcgat ataacgtcct gcggcatcat taatacgact
    31681 ggcacgacct aaatttgctg aatctacgca atccataggc ttatcaagca ttgcttcaat
    31741 cgcttcttca atttcatcag gtagtttttc accaaccgac gagaagaatt taatgccgtt
    31801 atcgtaataa ggattgtgag aggcagaaat cacaatgccg gcttccgcac ggaaagtacg
    31861 ggttaaataa gcaattgccg gagtcggcat cggaccaacg aatactgctg ataaaccggc
    31921 tgcggttaaa ccggcttcca gagccgattc caacatataa ccggaaatac gggtatcttt
    31981 accgattaat acttttttcg tgccttgggt tgccaacact ttacctgctg cccaaccgag
    32041 ttttaatgca aattcaggtg taattggaaa tttacctact tcaccacgca caccgtctgt
    32101 gccgaaatat ttacgagcca ttctaattcc taagattgat aaaaatttac tttaaaaaat
    32161 attgatatgc cggactttcg ctcacatttt ggaagcggta acctagctgt tctaaatgtc
    32221 ggtttaattc tacttcatcg cctctgttta atgcaaatgc ggcaagaata tcgccataat
    32281 cggctccgtg agctcggtaa tggaataacg agatatccca gttagtcagc atttgtaaga
    32341 attttagcaa tgcccctttc tgctctggaa attcaaagct atagagttgc tcatattgaa
    32401 tggagcttgc tctaccgcct accatataac gaatatgggt tttggcaata tcatcgtccg
    32461 ataaatctgc cacatcatag ccgttttgtt gcagatcttt aataatctct actttttctg
    32521 ccgagcctga aattcgcacc cccacaaaaa tacaggcttg tttatcatcg gaatggcgat
    32581 agttaaattc cgttaccgca cggttgccta aaatctcgca gaattttaag aaactacctt
    32641 tctgttcagc aatggtgact gccaataaag cttcacgttt ctccccgatt tcacaacgct
    32701 ctgacacaaa acgtaaggtg tggaaattca cattcgcccc ggaaagaatg caagctaagt
    32761 ttttatcttg taattgatgc tctttcacat attttttcaa accggcaagg gaagttgccc
    32821 cggacggctc ggaaatcgca cgcacatttt caaaaatcaa cttcattgag gcacagattt
    32881 catcattatc caccaacacc acatcatcaa catattgctg acacaggcgg aaagtttcat
    32941 cgccaatgcg ttttaccgca ataccgtcag caaaaagccc aacccgttct aaatcggtcg
    33001 gttgcccttg ctttaaggcg tgatataagc aagcagaatc tttagattcg accccaatca
    33061 ctttaatatt cggcatcacc tgcttaatta aaaccgcaat gccggcaatt aagccgccac
    33121 cgcccactgg aataaataca taatctaaat ccggcttttg ttgcaccagt tctaagccga
    33181 ttgtgccttg ccctgcaatc actgccgggc tgtcaaacgg gtgaatgaag gtcataccca
    33241 attcggtgga aagctcaatc gctttcgcct tagcttcatc aaaattcgcc ccataaagca
    33301 acacttcacc accatagcca cgtaccgcat caaccttaat tgccggtgtg ttttgcggca
    33361 ttacaatcaa ggctcttaaa cctaaatgtt tggcagaaag tgccacccct tgtgcgtggt
    33421 tgcctgctga agccgcaatg actccagcct ctttttgtgc tttggataaa tttgagatca
    33481 tcgcaaaagc acctcgcaat ttaaagctgt gaaccggctg tcggtcttca cgtttgataa
    33541 aaatagagtt gcctaaccgc tcagacagtt tttccatttt ctgtaaaggg gtcacttgcg
    33601 ctaagtcata aatatttgag cttaaaatcg agcgtaaata gtcgatagcg gattgggaat
    33661 gttgtgtttc gttcatcatt ttgaaaggtt atttattgtt agattgagat aaagacattg
    33721 gtaaatttcc aaggaaaatt gaccgcttgt ttggttattt agcaatggct ttaacaggga
    33781 atatttcctc tcgcccgttt gcgggagaga gacagcttaa aatttcgttc agaaatttta
    33841 agcagagaga ggggaaacct tggatatccc cctctccctc cgcaaatctt cgatttgctc
    33901 caccctctcc cgcaagcggg gagaggggaa atcacaaagt tagtgatgac caccgcaacc
    33961 acagccaccg tgtccgtgat gatggtgatg atcgtggtcg tgaccgccgc agcaaccatc
    34021 gtgatcgtga tgatgatcgt gcccaccaca accgcaaccg tgttcgtgtc cgccgtgaac
    34081 gtgtccgtgt gcgatttctt ccgctgtcgc ttcacgaatg ccaaccactt ccacagagaa
    34141 aagtaattcc tgaccggcta acatatggtt accgtccacc acaacttcat cgccatctac
    34201 ttcggtaatt accaccggta gcggacctaa atccgtgtcc gcaataaaac gcatacccac
    34261 ttctaattca tcgacgccca taaatacatc tttcggtaca cgttgaacca tattatcgtt
    34321 gtactcgccg taaccttctt ccggtttcac acgcacttca aacacatcgc ctacagcttt
    34381 gccttcaagg gctttttcta agccttctac caagttgttg tgaccgtgta aatattctaa
    34441 cggttggttt accggtgctt catctactaa tacgccttct tgagtacgca cttgatatgc
    34501 aatgcttggc actaaatctt ttgtaatgtt catattgaat cctttaattc atcggtttta
    34561 taaaatagca agccattgta acgctttatt ttatatttgc aatctatctg gaaattttaa
    34621 ccgcttgtca gtaaattagt cgataatatc aggggttacg gtgtctacca catcaactgc
    34681 ggttcccacc actccaccaa ccaccgaagt taccaaacaa ccacttagga aaatagttgc
    34741 tgaaatcagc ccacatactt tgattaattt tttcatttta aaatcctttc aaaaacaaaa
    34801 aacagcccta atcaagacta gagctgcatc atatttattc gcttaaatta tttttcttca
    34861 gcgataaagc gataaactac cgcaccgata attgcaccga caatcggagc aacccagaac
    34921 aaccataatt gctcaatcgc ccagctgcct tggaataacg ctacaccggt tgaacgtgcc
    34981 gggtttactg aggtattggt taccggaatg ctgattaagt ggattaaggt taaagccaaa
    35041 ccaatagcaa tcggagcgaa acctgctgga gcacgtttat cggttgcacc cataatgatg
    35101 attaagaaga atgccgttaa taccacttca attaataatg ctgctgttaa gctatagccg
    35161 tgtggcgaat gctcaccata accgttgccg gcaaagcctg ctgtagcatc aaaagtcgga
    35221 acacctgaag caatggtgta taacactgca ccggcagcaa tcgcaccgat tacttgggca
    35281 atgatataag gcactaaatc tttagcgtta aaacgaccgc cgactaataa accgattgaa
    35341 accgccgggt tgaagtgacc acctgaaata tgaccgactg catacgccat tgttaatacg
    35401 gttaaaccga aggctaacga aacgcctgca taaccgattc ctaattcagg aatgcctgct
    35461 gctaaaactg cactgccgca accaccaaac actaaccaaa atgtcccgaa aaactcagca
    35521 aaatattttt tcatttttta tccttaccct aaagggtgaa tcacacataa gtgtattaac
    35581 tttccgaatg ctataaaaca tagccaataa aatatgagta tactaaaaaa agtaaagacg
    35641 catatttctt aattgatagt atagaccgat tttttcctcc aattaaagta aaaatacaac
    35701 tctatacaaa tctatacatt tctattcaaa ttccacactt cctgaagcgg tagctgaaat
    35761 tgtggtttta cctgcttcta acgggatttc atccatagat ttgctttgtg ccattgatga
    35821 aactgcatac attgctctgt gttcataata tggtctacca ccatcatttg gagtttgaat
    35881 attgatatta actagcttat atgttttcgc ccctaaggct ttttgaatca catcggcttt
    35941 atgctgaaat ttgctgataa tttccagcgt catttcatct tcaagggacg ccattttctc
    36001 tggcgataca ctaaaatcaa tgtaacgaat cgccacatct ttacctaaat tttccaacac
    36061 cgctgccatt gcatcaaaat ctttgctttt caactgaatg ctaccagagg tatcccaacc
    36121 atcaatattc cctttgttgt tataattaac gtgattagtc acaccttcag cttgtacttc
    36181 aatcgatgga tgtttttttg cctcagccaa tacacgattc aggttttcag atacaaattt
    36241 tttcagctcc ggcaaggagt tacctgattt ttggctatac acacttgcct gcatcacgtc
    36301 cttttccacc gtgcgagaga cttcggttga gaaattaaaa gaagccggtt tatctttatg
    36361 ttccacggta tgagtttccg ctgaagttac cgctgttgcg actgcaagcg gtagaatggt
    36421 aagaaaattt ttcaatttca taatcagtcc ttaaaagggt taaaaatcat ttcttagatc
    36481 tcacttgcgt aggaaagttc attcaatcga aagcacaatc gcctgtgtat cattttcaat
    36541 ttgccagcga atattgtagc cggcaaggtt cataccataa actcgctcac taggtttccc
    36601 ttgttgatac gccgggcgag ggtcttgggc gatgacatcg gcaagaaaac taagcggctg
    36661 ttcgatgcca aattttgcaa aatttcggca aaattcgaca gcttgttttg cctcctcgct
    36721 aaaacgcacc gctaatcttg cttgtggttt ttgctgagca aaaccggaaa ccgcttgcgg
    36781 ctcgctatct gcaaatgcaa tgtaaggctt gatgtcaaaa attggtgtgc cgttaactaa
    36841 atccacgctg cctaatttca aataaacttc actccccccc gccactaccg cttctaactt
    36901 cactttcgat aagccaagcg gattcggacg atgggtggca cggctggcaa agaccccgac
    36961 ccgttcgttc ccgcccaagc gaggcggtct gacggtggcg tgccactctc tttcgggaat
    37021 gtgatggaat tggaaaatca accaaatatg actaaatttc tccaagcctc tgactgcatc
    37081 gggggtattg taaggcggaa ttaaacgtag aatgcctttc ccctccgcta ccaaattcgg
    37141 ctggcgaggc acggaaaatt tttcatcata ggggctttcc acaaaaccga tagggtttaa
    37201 ttgaatcggg gttagttgat ttgaggtaga gttcattacg cttttttctg ttaaaataat
    37261 ataaaatatt ggacataatg atatgaaatt gaggatggtg caagcgtcca cgcttgtacc
    37321 aattcgtttt accatttaac acaagagtgg acgcttgcac tatcgcttaa atccttaaca
    37381 tcattgtaaa tgaaattacg ctaagattat tctctatgaa caaaaattct ctcttttcga
    37441 tttggtttac caccgctcgc ccgaaaactt taccgctggc gttagcttca attattgtgg
    37501 gttcagcact tgctcattgg gcagggaaat ttgatgttgt taccacctta ctcgcattta
    37561 tcaccaccat tttgttgcag atcctgtcta acttcgccaa tgattacggc gaccacgtca
    37621 aaggctctga caccaaagaa cgaatcggac cgctacgggc gattcaacac ggtgttattg
    37681 gcggtgaaca acttaagaaa gccgtgatta tcttaagcct actctcgttt gtttccggtg
    37741 ttgccttaag tgcctatgct tttgaaacag tgcaggatct gtttttcttt atcgggcttg
    37801 gcatcgtctc aattattgcc gccattactt acaccgtcgg caaaaaagcc tacggctatt
    37861 tggggctggg cgatctattt gtgctgattt tctttggctt tgtagcggta atcggcgtgt
    37921 tctacttgca ggctcatagc ctacctataa tgattctgct ccctgctttc ggttgcggat
    37981 tgctgtctgt agcagtgtta aatatcaata acttgcgtga tattaaccaa gaccgacaag
    38041 ctgggaaaaa cactctcatt gtacgaatcg gtagccaaaa cgggcgaaaa taccacgttg
    38101 cattgttagt gctagcggtc atttcttatc tgatttttgc aatttctgaa tttgaacatt
    38161 ggtatagctt catttttttg ctgtctgtac cgttactggc aaaacacgct cgttttgtct
    38221 atcagcataa agacccaaaa gaactctacc caattctagg gcaaatggca gggctggcgt
    38281 tgctcactaa tctattattt agtttgggca ttgtgttagg gtaagttgca aaattttaac
    38341 aaaactaaac cgcttgtaat aaaggattac aagcggttgt tttttatcta aatttacaat
    38401 tagttatcta gttcttcaaa gaatccatct ttttcgccac gttgatactc cgaattgagc
    38461 aacttattaa taatgtacca atccgcttca acctctatat cgccttctgc ataagcacct
    38521 aattcgtatg gcggataaac aaaagcaatg ccgtgagggg taaagtagaa ttggtcagaa
    38581 atacggaact cttttttatc agcaaatcca ttatagttgc cattttcatc cacacgcacg
    38641 ctactgtaat tttcccaaag aatgtctttc agttgaactt gattttttgg gctgattaaa
    38701 tcatttaagc caatgattgc ttttttagct aaatctacat tgatatattg cgtatagtgc
    38761 ataccgtgag ccccacccat ataggtgtaa tgcatcatag tgaatgtagc aatattattg
    38821 cgttgcccga taaaagcact ggaaatatga tcatcatagc caatagctgg ctcggttttc
    38881 acactttcta ccaacccttg ataaaccgct tcacgatgct ttttaaactc ttcttcggtt
    38941 ggatttttca gctttctgcc ttgttcttca ttgtaatcat aggcctgatt aatcaaaagc
    39001 tggttaagcc aatcaaaatt ggtttttggt agagacacaa acgcacttac tgtactttct
    39061 tctattgcaa attcttgttt cggatcaact tggtgcttaa tcacctcttt cttatcaaag
    39121 attttcacaa tttcaacatt taacgctgtg ttttgctgag cgttctctaa ctctgatttt
    39181 aatttttcat tttctgcttt cacccctgaa agttctgcaa cttcagcctc tttttttgct
    39241 aaatcagcct gagcattttt taattctgtg cctaactgaa caatttgttt ttcggcttct
    39301 aataccgttt gggtcatttt gccgtcttca caagctgaaa tcagaaatac tgagccaatt
    39361 aaaagtgcta atagtgattt tttcatctct ccctcttttg taaaaaatac ggtaaatatc
    39421 accgcttgtt atacagatta aaacaaaatc ccctatacca tcaggcatag gggaaatgat
    39481 tagtcgtcta agaaactgcg taaggtttcc gaacggctcg ggtggcgaag tttgcgcagt
    39541 gctttcgcct caatttggcg gatacgttca cgagttacgt caaattgttt accaacttct
    39601 tcgagtgtgt ggtctgtgtt catatcaata ccaaaacgca tacgcaacac tttcgcttca
    39661 cgcggggtta agccctctaa cacttcgttc gttgccatac gcaggctctc cgcagtggcg
    39721 gaatccaatg gtaattcaag gctttcgtct tgaatgaaat cacctaaatg tgaatcgtca
    39781 tcgtcaccga ttggtgtttc cattgaaatc ggctctttgg caattttcaa tactttgcgg
    39841 attttatctt ccggcattcc catacgttct gccagttctt ccggcgttgc ctcacgcccc
    39901 atttcttgta aacattggcg tgaaatacgg ttgagtttgt tgatagtttc aatcatatgc
    39961 accggaatac gaattgtacg ggcttggtca gcaatcgaac gggtaatcgc ttgacgaatc
    40021 caccaagttg cataagtcga gaatttataa ccacggcggt attcaaattt atccaccgct
    40081 ttcattaaac cgatgtttcc ttcttggatt aaatctaaga actgcaagcc acggttagtg
    40141 tattttttcg caatcgaaat caccaaacgt aagttagctt ccaccatctc ttttttcgca
    40201 cggcgggctt ttaactcacc attggaaata cgcccgccaa tttcacgaat ttgagcaatg
    40261 gttaagcctg atgtttgctc taaattctgt aagttagcaa tattgacacg gatattatcc
    40321 acataattag ctaatttcgg tgctgcattt ttcttggcat taatcgcttt ttcaatccac
    40381 gcttcgctta attcgtgccc ttggaatgct ttcaagaaat ccgctttttt catgccggca
    40441 tattccactg catagcgttg aatttgacgt tcttcagtgc gaacctgctt catcagtttt
    40501 tgcatagaag caaccaataa gtcaaattgc ttcggcacca aacggaattc acggaaaata
    40561 tgagataaaa tttcaatttg ctctttcgat tttttactgg ttcgcccgtg tttttgaatg
    40621 accaataaca ctttttcatg ttggctgcgt agggcttcaa atttttcacg ggcaagttcc
    40681 gggtcaattg agctgtcatc actgctgtct gaactgctat caccgttttc atcttcgttt
    40741 tcgtcatcta catcaggcac atcagaagat tcttcatctt cacctaaagc agcctcaata
    40801 tcctctaacg gtgcttcttc taaaatatta ggatcgacaa atgctgtcac taaatcagaa
    40861 aggcgcattt caccggtttc gacttgagca tagcaggcta acaggccact taaggcttcc
    40921 ggatattccg caatcgcaca ttgaacttcg ttaatccctt cttcaatgcg tttagcgata
    40981 tcaatctcac cttcacgggt taaaagctca actgtcccca tctcacgcat atacatacgc
    41041 acagggtcag tagttctacc taactctgat tctacggttg aaagcacttt ggtggcttct
    41101 tctaccacat cttcatcggc gatattttca gcgagtagta aatcatccgc atcaggggca
    41161 gcctctaaaa cttggatacc catatcgttg atcatctgaa taatatcttc gatctgctcc
    41221 gcatccacca actcttccgg taagtggtcg tgcacttcag aaagcgttaa atatccctgt
    41281 tcacgccctt gactgatcag aagttctaat tgagattgct gttctaattg ttgatctgct
    41341 tggttttcca tagtctatcc gtttattatg cgagcaaaaa tagtagtgga ttataccact
    41401 aaatttggtt cgacttcata aattcacaaa aaaattctat ttttctaatt tacacattac
    41461 tttgatgctt atgagaacag agaggtgtag caagagagat aaataacttt ctttttagat
    41521 agaattaatt attttcttcg ttcatcactt ctgccaaatc tcccctaacc cctctttgct
    41581 aaagagggga attattcgag cttaaaattc tactgaaaca tcaaaagagc atactctttt
    41641 ttctcatcat cggttaagcc cacggttcgg tctttggcaa ttagctcttc tttgcgtaat
    41701 tccactaatt tggcgtagag aaaatcgaga gtgtcaataa atgttcgttc gatattttcg
    41761 ggtaactcta aatgatccca atttgcgagg gcttcaacaa tcttatattg gggatcttcc
    41821 cgataatgtt caagtagccc gcccatactg atacctgcat tttgctgaca agttgcgaca
    41881 atatcggtta ataatgtaaa gccaggatct ttcaaggagg ctaaagcact tacatcgggt
    41941 acgaatttca caaaatacgg attttgaatc aataacgcaa tcaacagccg cattggcgta
    42001 cgtttcattt tgaccgcttg atgtaaaggc ttctctgccg cttttttcgt cggtaacaga
    42061 gcttctatct gcgttgggtc taaaatgcct aatttctgtc ctaaaatatt gcgtaaatac
    42121 actcgcagca tctcgcccgg aatacgatta attaacggca cagctaaagc agcgagcttg
    42181 gattttccct cttttgaaga gagatccaca tccgccagca aactgtcaaa taagaaatcg
    42241 cttaatggct tggcattctg tgccacgtac tgctcaaatc cttctttacc ttgagaacga
    42301 acaaaggtgt ccgggtcttc gccatcgggc aagaaaataa atttcagttg gcgaccgtct
    42361 tgcaaataag gcaacgcatt ttctaacgcc cgccaagctg catctcgacc ggctctatcg
    42421 ccatcataac aacagacaat ttgctcggtg caacgaaaca tttgctgaat ttgttcaccg
    42481 gtagttgccg tgcctaaaga ggcgactgca ttgtccacgc cgaattgggc aagggcgacc
    42541 acgtccatat agccttccac cacgaacaga taatccggcg tttcattgac tttcagtgct
    42601 tgatacaagc catataactc actgccttta tgataaatca ccgtttcggg cgagttcata
    42661 tatttcgccc cttgctcatc attcggcaac acccgcccac caaaggcaat tacccgtcca
    42721 cgcttatctc gaatcggtaa cattacccga ttgcgaaatt tatcgtaaat tcgaccgcta
    42781 tcatttttgg ttaaaacgcc cgtatcgagc aatttctgaa tatcttcttg tgattgccca
    42841 aaagtgcgta gggctgcatc aaaggcattc ggagcaaaac caatttcaaa gcgttcgata
    42901 atctcttcag acaaacctcg ttgctgtaaa tagctttgtg gctcaatctg gtgcgataaa
    42961 ttctgctggt agaacttcgc caccgcttcc atcaattcat aaagattacg cttagtttta
    43021 aaattagctt gaggcttgcc gtcacgttga atcacattct ctctcggtac ttccagcccg
    43081 tgcatagctg ccagttcttc aatcgcttcc ggaaattcga gtttgtcata atccatcaaa
    43141 aaggtgatga cattgccgtg tacgccacag ccgaaacaat ggtaaaactg ttttgattgg
    43201 cttaccgaaa aggaaggggt tttctcgtga tgaaaaggac agcaggcttg ataatctcgc
    43261 ccagcctttt tgagtttgac ccgactgttg atgacctcaa caatatcggt gcgagcgata
    43321 agatcatcaa taaatgaacg tggaattgtg cctttcattg atttcctcct gctctttgaa
    43381 tgatacaagc ggagcaattt tgcaaatttt ttgcaaaaaa caaccgcttg aaatagaaac
    43441 gttaaaaaca ccaaaaccgt gagcctaacg gaatcacggt ttcgatatag tttgctaacc
    43501 agcctaacta attagtataa acgtgtgtta cgtgcgttct cacggaaatt acgtttagcg
    43561 tgacgtttag caagtgatgc tttttcacgt ttacgaattg tagttggttt ttcgtagaat
    43621 tcacgagcac gaacttcagc taagataccc gctttttcgc aagagcgttt gaaacgacgt
    43681 aatgctacgt caaatgattc attttcacga actttaatta ctggcatatg ccatcacctc
    43741 agaaaaatat gattaaatta aaccgcacac aattttggcg gcatagaaca aaaaaggtag
    43801 tgcattctac cttaagcact cacataagta aagtagtatt gtggcataaa accgccgtat
    43861 tatgttgcat ttttctacag ttcgaataat ttctcggtcg aaaaacttaa tgccggaaag
    43921 accaccgaag ttgccggttc atcttctgcc accggctgaa taccgatata tttaccgttt
    43981 tccaacacaa aaatctgaat agtgcgggtt tcgggagaaa caatccaata ctctttcacc
    44041 ccttgttcct ggtaaagctc gtatttatct ttcatctccc ttttggtatt acccggagaa
    44101 aggatttcca ccactaaatc cggtgcccct acacagcctc tttcatctaa cttactgaca
    44161 tcacaaatta cacaaagatc aggctgcact acagttttga cttttccgtt ttcatcggga
    44221 aaccgaacgt caaaaggcgc agaataaatc tggcattggt gattgtcaaa aacctctaaa
    44281 aattttgctg tcatcttcat agaaattcgc tgatgaaaac gagtaggagc cggagacatc
    44341 gccacaattt tccctttgat aatctcaacc cgctctttaa atttccatag caaataatca
    44401 gcgtaactgt aacttttttg taagtccagt tgatttaagc tggtaatttc gttcattggt
    44461 aataagctca taccgcctcc tttatcagaa atataaagat attatgccga ataatccctc
    44521 aaattcaaca aaactttcgc taaaaagaga tagataacct ttataccctt agtataaaat
    44581 gacagcaatt ttcattgttt taggatatgt cgatgcacct taacttcaaa aaaatagaca
    44641 actcacatat tgctcttttc tataatgtac tagtcgccac attttttgtc actgttttaa
    44701 cctttaagaa aggttatagt tatgtgccaa tggcattagg tattatcgct acacttagtt
    44761 tcttatttta tcgtttcaaa ttaaaacaaa agtggttact tgataaagag gataaatttt
    44821 ttattttctc gcttattggc tattttctaa cgtttgcaat gtctgctatt tttaatggcg
    44881 atggcattcg tgaaattgat aatcctatcc agattttatt gcttatccct ttaatcatcc
    44941 tctttagact ttacccgatt aaaaaagaaa ctgtattgca ctttataccg attggagcgt
    45001 tggtagctgg ttgtatagca atatatcaga ggtttatatt aaatcttaaa tttcctttcc
    45061 ctgaaataat gcgtattcaa tcggggaaca tagcaatatt attatcacta tttagtatag
    45121 caattgcctt ttattggctt tcaaaaaaaa gaattaaaac tggcattgcc tacctggttt
    45181 ttgccatgtt tgggttattt gccagtattc taacaggagc aagaggcggc tggcttgcat
    45241 tcattcccat ttgctttttt atcctatttt taaatttaag acagctaaat aagaaagcta
    45301 ttttcctgat tctattagca cttatatctt cactctcatt ttttatctcc aaaccagaat
    45361 ttggcataca aaaacgatat aatgcagcta agaatgatat tatcgtattt ttagaaaaag
    45421 gaaatagaca ttcatctctg ggagctcgtt ttgatatgtg ggaaaatgcg cttatcggaa
    45481 tccgtgaaaa accgctatta ggacacggta gcacaggcta tgaaacattc aaaaagaaac
    45541 agattgaaac aaaacaaatg gcaaaaacaa cgcttaggtt taatagctta cacaaccaat
    45601 acctagaagc ctttgtgaaa agaggtgtag ttggttttat ggcgctaatg gctattttaa
    45661 ttattccatt tgttattttt gccaaacgat taaaggcaaa aaatagagag gtaaaatgta
    45721 tggcgatatt aggcattgta catattattt cgcattcatt ctttttccta agccaatcat
    45781 ttttagccca taattcaggc tcattattct atttctttgt gttaatttta ctctaccatt
    45841 tagtcaaaca gaacgaagag ataatatgat aaaacaatag aagaaagttg ggaatataac
    45901 cgaggtggta acttcatctt ctaccacagg ataaatgtcg ggatatttcc tctttttctg
    45961 cttcttacta ctaattccga ttagccaaat accattccac tgttttacgc aagccacttt
    46021 caaaagtttc tttcggtttc cagtcgagtt ccttttcgat ttttgaagta tcaattgcat
    46081 agcggaaatc gtggccaggg cgatcttgca cataagtaat taaatcagca tattgtccta
    46141 caacaagcgg gttatttggc accatttctt gcaaaataga acagatagaa cgaaccactt
    46201 cgatattggt tttttcatta tgcccgccaa tattgtaggt ttctccgatt tgcccttttt
    46261 gcaacaccaa atagagggca cgaatatgat cttccacaaa cagccaatct ctgacctgca
    46321 agccgttgcc gtaaacaggt agggatttac cttctaaggc atttaaaatc attaacggaa
    46381 taagtttttc gggatattgg tatgccccat aattattgga acagttggtg atgacagtcg
    46441 gtaaaccgta ggtgcgatgc caagcccgag ccagatgatc gctggcagct ttagatgccg
    46501 aataggggct acttggatta taaggggttt tctcggtaaa taattcctcg cttttggcta
    46561 aatcaccata gacctcgtcg gtcgagatat gtagaaagcg aaacgccgat ttccttggct
    46621 caggtaacgt gtcccaatag gctctcgctg cctctaataa agtataagtg ccgacaatat
    46681 tggtttgaat aaaatctgct gccccagaaa tagagcgatc aacatggctt tccgctgcta
    46741 agtgcattac cacatcaggc tgatatttgc caaaaatctc agaaatttga ccgcttgcac
    46801 aaatatctgc tttttcaaaa tggtagcgtt cgtgatgtgc gacactctcc aatgaggcta
    46861 aatttcccgc ataggtgagc ttatccacat tgataactgt gtgtggagta tgttcaatca
    46921 gatagcgaac taatgcagat ccgataaaac cggctccgcc agtgatgagg atgatcataa
    46981 aggtgaatat gaaatttgat tcacgaaatt tcgtttgtat ttaatatggc tttgaatatt
    47041 cttttcagcg tcttttttat cccaaatttg caattcccaa ggataataaa agttacttga
    47101 attcttaaaa taaatatgaa tacccacata ttcatcttta tctctcaaat accaattttt
    47161 tagtccatat ttttcttgcc aataatctaa tgactccatt acttgctgaa tcacttcact
    47221 agaaacaata atacgagctc caaaaatatc gttgagaatg ctatttactg gataaccttc
    47281 actacgctgt ttaaaacgct cgattttatc taaaatcgat tctgaggttt ttactcggta
    47341 aaaataagaa attccctcta aatctgcacg atataaataa tcattaatag attcgtgtaa
    47401 attaagacga taagctaaaa tatgtggcgt aggcactttg gcaaaagtat gcttaagatt
    47461 cactttttca atcttacctg tttcaaagta gtctttcgaa aaagctaagt gcaacttgtt
    47521 gatttcatca atgagttttt ctattttctc aagcatgcta ttcactctct aatttattat
    47581 cttgccccaa atccagttag cattgttttc aatgttttaa aaataattaa aatatcaagc
    47641 cataaagaaa aatgcttaat atagtagaag tcatgttcta cttttacttt tgtatcatca
    47701 acatctgccg cataaccttg gacgacctga gcccaaccgg aaatacccgg tttaacgata
    47761 tggcgataat tatagaatgg aatttcctct tcaaatttat ctacaaaggc tgtctgttct
    47821 gggcgaggac caattaagct catatcacct tttaatacat taaaaaactg aggtagctca
    47881 tcaatacgag ttttacggat aaatttccca atacgagtta ccctcatatc cgcactcgaa
    47941 gcaaactgtg catcatcttt ttcggagtct ttacacatac tacgaaattt ataaatatta
    48001 aactcctttc caccttgccc aacgcgtttt tgaataaaca ttgctccacc ttcactttct
    48061 aagcgaatag caatagcggt gattgtcata ataggtaaag taatgggaaa cgtagcaaca
    48121 atcaatgcaa tatcaatgat acgcttcact aatgagtaaa ttggagaagg aagtaatgaa
    48181 cctaagtcat tttcatacat atggcgaatt ttgacacgcc cggttaaaga ttcctcaagc
    48241 tggcgaacgt tatatacagg aataccattc aatgtacatt tcgctaaaaa tttatgccat
    48301 tctgcggaca aatcaggata gtgtaaatct accgcaatag agttaattct cttttccccc
    48361 aatattggtt cacttaattg aatccactct acattctgaa ttcggttcaa attgatagct
    48421 cttccgaatg gaaccaaagc gattttaggg ataatccaac ttcttgaaag aaaataacca
    48481 ataaaacaaa atagaattgt gagtataaag ctcgtaccta gcaatgtatt agaataatca
    48541 aatctaaata ttgttaacac gattaataaa accgcatacc aagaaataac ggtggaaaaa
    48601 acaaaacttg ctgacttatt acctggatat ttcattaaca ctcttaagct gatagctatc
    48661 attacaaagg caagagaagt cgctataatc gtattagaac gagtttcaat agaattaaat
    48721 ttctctcccc aaaaatagat agcgggtaag acacttgaga acataacgcc caaaatactt
    48781 tgaacagctg tactaaaaaa gatacgttca taccaacgag agtgtctttt cttttgctga
    48841 atgctcataa tttatccttt tcttaatttc ttataaagtc ttcctaaaag agatctaggc
    48901 aataaccgtg gtaaggctct aagtataaaa aacatgcttg atgagattat tgattgtaat
    48961 cccaactctt ttttcaattt tgctaattgg tactcactct taatgtaatt ccacccttta
    49021 cgccgagcgt acattgcaga acctgaacga acatttacca gtacatctgg taaattatac
    49081 acctcatatt tctgtgtaat aactcgtaac cataaattgt aatcttccat ataaagatga
    49141 tgctgatagc ctccaacatg ctcgatcaca gattttttat aggctactgc catatggtta
    49201 aaaggatttc ttagtaatgc tgaaatacga atttcatcat cattaatggg cacttgtttt
    49261 atacccagag aattagacat tgtttcgtca aattcttcaa cttgtccccc caataaaacc
    49321 acatcaggat ttttactaat aaaatcaatt tgcttttcaa atcgagatgg taagcaaata
    49381 tcatcagtat ccattctaaa cacccactca ttagagcagt gttttaagcc ttcatttaag
    49441 gccggcctaa acccacattt tgtggtaaac taacaacaac aagcggtaat ttttcagtaa
    49501 aatgttgcac aattcgctct aaatctccag gaattatacc atcaaaaacc acaacaattt
    49561 cacttgctgg taaagtttgg gatactaaag aatctaaaca catctctaaa taagctggtt
    49621 tttctttata atacaaagat attaatatcg aaaacttcac aactactttt c
//
LOCUS       DANLZQ010000006        49540 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.006, whole genome shotgun sequence.
ACCESSION   DANLZQ010000006 DANLZQ010000000
VERSION     DANLZQ010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 49540)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 49540)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..49540
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.006"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            124..1092
                     /gene="mdh"
                     /locus_tag="PXE50_000292"
     CDS             124..1092
                     /gene="mdh"
                     /locus_tag="PXE50_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HDL5621232.1"
                     /translation="MCQSKKVALLGAAGGIGQSLALLLKLNLPAKSELSLYDISPVTP
                     GIAVDLSHIPTDVKVTGFAGEDPTEALKDADVVVISAGVARKPGMTRADLFNTNATIV
                     HNLVEKAAKVCPKACIAIITNPVNTIIPIAAEVLKKAGVYDKNKLFGVTTLDVIRANT
                     FVAEAKDVNVKYVRVPVIGGHSGTTILPLLSQATVNGLKLEFTQEQIEQLTHRIQNAG
                     TEVVEAKAGGGSATLSMAQAGAEFALGLVRALIGEDVIRYAYVDNANGETSPAFFAYP
                     IRLGTNGVEKVLPIGNLSEFEKDQLEQLIPVLNDEIQLGQTFNKNA"
     gene            1169..1465
                     /locus_tag="PXE50_000293"
     CDS             1169..1465
                     /locus_tag="PXE50_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621233.1"
                     /translation="MKKHHIIILTLASASVVACSSNTPVQVVNGDKNIDYSQPKTIYI
                     SETNTQPPALTKQEKIKPSNATALCFNGSYSTDIQNPCKKDGGVKQYFAHHHAN"
     gene            complement(1513..1689)
                     /locus_tag="PXE50_000294"
     CDS             complement(1513..1689)
                     /locus_tag="PXE50_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5363 domain-containing protein"
                     /protein_id="HDL5621234.1"
                     /translation="MMSEQTEKKGWFKKALEKYDAFCDELGVNQGACRGCVPVVKFDP
                     EPEKEQPEKSENKT"
     gene            complement(1774..2265)
                     /locus_tag="PXE50_000295"
     CDS             complement(1774..2265)
                     /locus_tag="PXE50_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015965590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HDL5621235.1"
                     /translation="MPSFDIVSEITMHEVRNAVENANRVLSTRYDFRGVEAVIELNEK
                     NESIKLTTESDFQLEQLIEILIGSCVKRGIEHSSLDIPTESEHHGKLYSKEIKLKQGI
                     ESDMAKKITKLIKDSKIKVQAQIQGEQVRVTGKSRDDLQAAIQLVKGADLGQPFQFNN
                     FRD"
     gene            complement(2281..3144)
                     /gene="serB"
                     /locus_tag="PXE50_000296"
     CDS             complement(2281..3144)
                     /gene="serB"
                     /locus_tag="PXE50_000296"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HDL5621236.1"
                     /translation="MTNTIFIYSKTLNEREIEQFSQQTAAILLKQAVYLDYKIAFFST
                     NLTACELRETAQKINADISDLTIIPTLNQGGLLLMDMDSTAIKIECIDDIAKLAGTGE
                     VVSAITASAMRGELDFEQSLRKRVGTLENASESILQKVRENLPLMDGFEQMVAILKEH
                     GWKLAIASGGFDYFADYLKQKYGLNFAVSNQLEIIDGKLTGKVLGKVVDAQHKADTLQ
                     NLATTFNIPPNQWVAVGDGANDLPMLKTASLGVALHAKPKVQAQADFVVNFGDLTALC
                     LLLNANHLFQH"
     gene            3230..3889
                     /locus_tag="PXE50_000297"
     CDS             3230..3889
                     /locus_tag="PXE50_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtjB family periplasmic protein"
                     /protein_id="HDL5621237.1"
                     /translation="MYISREKITKTLLLAGITLLCCGIVAVILMGVNQFKLGSQLASI
                     NQVSNLSHLLVRQQANIFSFLLVKNAKTDELVDALDSFAKEDFIIDANIYSPNGVLLA
                     QSQNAKDLKVLLDSEQSAKTQQIVEPIFSQQALVGFLRVTFDAEYGQTTKARVEQQFH
                     QLYGEIIILLLTGILLASSINYYFRRKIHHVQISPKPLMSQVKTQTQRFHSRRRWIKR
                     K"
     gene            3999..4217
                     /gene="infA"
                     /locus_tag="PXE50_000298"
     CDS             3999..4217
                     /gene="infA"
                     /locus_tag="PXE50_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001040186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HDL5621238.1"
                     /translation="MAKEDCIEMQGTILETLPNTMFRVELENGHIVTAHISGKMRKNY
                     IRILTGDKVTVEMTPYDLSKARIIFRAR"
     gene            complement(4288..5481)
                     /locus_tag="PXE50_000299"
     CDS             complement(4288..5481)
                     /locus_tag="PXE50_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDL5621239.1"
                     /translation="MQNIDVVVIGAGAAGLFCAAQLGQAGKKVVVLDSGKKVGRKILM
                     SGGGFCNFTNLDVSAGNYLSQNRHFVKSALSRYTQWDFISLVSHYGISYHEKELGQLF
                     CDESSQQIVDLLQAECNKGKVEILLRQAVISVEKVANFFEISTACGKFQSEHLVIATG
                     GLSMPALGASPFGYQLAEQFGIPVVPPRASLVPFTWKESDKYFAELSGIALPITVSAN
                     GKSFSNQMLFTHRGLSGPAILQISNYWELGETVEIDLLPSQSITDILSELRQSSPKLQ
                     LKTVLSRYLPKKLVEVWLEQKLLTDKVIADLSKKDLTLLEQFIHHWHFLPNGTEGYRT
                     AEVTKGGVDTDYISSKTMEAKNTAGLYFIGEVLDVTGWLGGYNFQWAWSSAFACAEGI
                     IEKSK"
     gene            complement(5481..5849)
                     /locus_tag="PXE50_000300"
     CDS             complement(5481..5849)
                     /locus_tag="PXE50_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE/DsrF/TusD sulfur relay family protein"
                     /protein_id="HDL5621240.1"
                     /translation="MSNSVQKLLFIINSAPYGNETFFSALRLALQIQEQHKANTEIKL
                     FLMSDAVTAGLAKQNPAEGYHIQQMLEILTAQGANVKLCKTCTNARGITDLPLADGVE
                     IGTLIELADWTIQADKVLNF"
     gene            complement(5969..7264)
                     /locus_tag="PXE50_000301"
     CDS             complement(5969..7264)
                     /locus_tag="PXE50_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HDL5621241.1"
                     /translation="MLEKLFQLKAKGSNVKTEIIAGITTFFTMVYIVFVNPSILGVAG
                     MDTQVVFVTTCLIAAFGTIAMGLFSNLPIALAPAMGLNAFFAFVVVQKLGYSWQVGMG
                     AIFLGSVGLFLLTVLQVRYWFMSAIPLGLRVGIGAGIGLFIALIGFKNMGLVVPNPAT
                     LVALGDLHDPKVLMGILGFFIIVVLAAKGIHSGVLISIVIVTALALAFDPAVSFNGIM
                     SMPPSLGAVVGQVDIAGAFDVALLGMIFSFMLVNLFDSSGTLIAVTTKAGFADEQGRF
                     PKMKQALLVDSTAAMAGSYMGTSAISTYIESGSGVSVGGRTGLTAVVVGILFLLTIFF
                     SPLAGLVPAYATAGALVFVGILMASSLIEVKWDDLTEATPAFITTAMMPFTYSITEGI
                     AFGFISYCVMKAFTGRWKEINLSVLVVSLLFIAKFVWVG"
     gene            complement(7361..8347)
                     /locus_tag="PXE50_000302"
     CDS             complement(7361..8347)
                     /locus_tag="PXE50_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HDL5621242.1"
                     /translation="MSNIHLAIAADFTLAEKLLEALANQDLGIENISAVELEPFGEEQ
                     NLRFGAKAVAQYALDEVNWAEFSHVLFAGKMAQAEVLAEAVKAGCVILDLYGITALIG
                     DVPVVVPSVNDENVANLRERNIVALANPQISQLALALKPLLNEPLKQVWVTSLLPSAY
                     FGDEKVKELAGQTARLLNGIPFDENAERIAFDVVPANVQGEEKSLPFSKAFELQIAKV
                     LPNLTACTTFHSVQVPVFYGVSQMVSVQSEYQLDANALSEAWKAENWLNFNENSVITA
                     VKNGENEEQNALEISQLLAKSEQEVQFWTVADEQRFSLAFLAVKLLKLVLAY"
     gene            8588..8863
                     /gene="ybfE"
                     /locus_tag="PXE50_000303"
     CDS             8588..8863
                     /gene="ybfE"
                     /locus_tag="PXE50_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA regulated protein"
                     /protein_id="HDL5621243.1"
                     /translation="MAKQDSDCITLDLFATVPKVGRPRTNPLDREQQLRINKRNQLKR
                     DKSSGLKRVELKLHSNLVKLLEEQASEQGVSRGQLIETILNNYLTNR"
     gene            8869..9393
                     /gene="fldA"
                     /locus_tag="PXE50_000304"
     CDS             8869..9393
                     /gene="fldA"
                     /locus_tag="PXE50_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006717621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldA"
                     /protein_id="HDL5621244.1"
                     /translation="MAVVGLFYGSDTGNTENISKMIQKKLGAELIDIRDIAKSTKEDI
                     EAYDFLMFGIPTWYYGESQADWDDFMPTLKEIDFNGKVVAIFGCGDQEDYAEYFCDAM
                     GTVRDVVEPNGGVIVGHWPTAGYTFEVSQALVDDDTFVGLCIDEDRQPELTTERVNKW
                     CEQLKEEMCLDQLA"
     gene            9429..9869
                     /gene="fur"
                     /locus_tag="PXE50_000305"
     CDS             9429..9869
                     /gene="fur"
                     /locus_tag="PXE50_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HDL5621245.1"
                     /translation="MSEANIKRLKEVGLKVTEPRLTILALMQDIRDEMQHFAAEDIYK
                     ILLEKGSDIGLATVYRVLNQFEEAGILTRHNFDANKAVFELNMNHEHDHIICMDCGKV
                     FEFKDPDMERRQREISEKHGMELTNHSLYLYGKCSNLTNCDEKK"
     gene            9952..12618
                     /locus_tag="PXE50_000306"
     CDS             9952..12618
                     /locus_tag="PXE50_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCE family protein"
                     /protein_id="HDL5621246.1"
                     /translation="MTMEENTHTVVDAQIRQPRKISPFWLLPIVAFIIGALLFFQILK
                     EQGETITIRFSKGDGITAGKTAIRYQGLQIGQVKRVYFVDNLKEVEVQAEINPEAKSI
                     LRKQTKFWLVQPSASLAGVSGLDAIVSGNYITLLPGEGDFVDEFIAEEDPPAITVSDG
                     DLLIRLISDDIGSITVGASVYFRKVPVGNIADYRFTKDQKKIEIDVVINQKYAHLVKK
                     ESRFWNISGISADVNLQGIKINMDSLASVVQGAVAFDSPDNMEIAEQGQKFELYPDLK
                     SAKRGIEINVKLPLTHNLKINETGVFHQNVQIGMLSQLKLPQVKDNGVPQQESGQHKQ
                     IDGVLLIDPSYENLLRSQTKILLKEPKFSLNTEQLTKVGELLRGVYFEVHPGEGEPQS
                     EFVVQNEADYLLSLPNLLSFSLIAPQAYGVDTNQGIYYSDVQIGEIVKRSLELDKVRF
                     DVIIYPPYRNLIGSNSKFVAISNIDMSVGLDGLRVHAGSPSEWLKGGVRLINGKNDGS
                     PKKQYALYKDIESAESGMATLDKKATTTLSADSLSGISEGSLVLYRDFQVGEVLKITP
                     KQQKFEVELFIQPNYRHLLTEKSRFWIEPATSVDVSLKGVNITTAPLMRTLKGAISFD
                     DGGSKGNKTLYASKEKATSGNTYLTLIAKDASKLSEGMDIKYMGLTVGQIEKLELQNA
                     KKQIKATAYIQRKYYPLIAKAGSKFNVISPEISTSGFKNLDAALQNYITVDVGSGQAQ
                     NQFVLADTDTVKTTYANGFPIIVETTNANGIQPEAPVLYRGMQVGIVSRLGLSELGDR
                     VLIYVNIQDKYKHLVRTNTQFWQASGYTMDVSLQGVSMNSGTMSQLLNGGIEFSTPYT
                     KVVKPQAQPNRRFFLQRKLPDEAPAWDQGIAE"
     gene            12636..13145
                     /gene="luxS"
                     /locus_tag="PXE50_000307"
     CDS             12636..13145
                     /gene="luxS"
                     /locus_tag="PXE50_000307"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005706864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HDL5621247.1"
                     /translation="MPLLDSFKVDHTKMNAPAVRVAKTMTTPKGDTITVFDLRFCRPN
                     IDILPVRGIHTMEHLFAGFMRDHLNSEQVEIIDISPMGCRTGFYMSLIGSPSAEEVVK
                     AWTASMEDALHKIPDVSAIPELNEYQCGSYKEHSLKEAHQIARNVLAAGIGINRNEDL
                     ALDEKLLNP"
     gene            13214..15061
                     /locus_tag="PXE50_000308"
     CDS             13214..15061
                     /locus_tag="PXE50_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5621248.1"
                     /translation="MFEKLFKWFEARVETYPNEMPKTPKSGLIPFIYDATKGMRFYIL
                     LLTVLVAAVGIIEAVLFRFMGDLVDWVNKYSPTELWAEKGWTIIGMFFIALLAVVFVY
                     LASSIRFQSLQGVFPMRLRWNFHRLMLGQSLGFYQDEFAGRVSAKVMQTALSVRDVIM
                     TCADMLVYVLVYFTTSSVILLQLDGWLFVPFILWVISLAATIIYFVPKLAQAAQEQSD
                     ARSLMTGRITDAYANIATVKLFSHGNRESAYAKESMEGFMVTVHKQMRLVTVIETVTN
                     LTSMALIISTAGIGLWLWGSSVVTAGAIATSTALALRIKGLSQWIMWEFARLFENLGT
                     VQDGMITLSKPHNVVDKIDAKPLNVTKGEIKFENVDFAYDPKKPLLKDFDLTIKPGEK
                     VGLVGRSGAGKSTLTNLLLRFYDIQDGSITIDGQNIRDITQESLRSQIGLVTQDTSLL
                     HRSVRENLMYGRPNATEEEMIKAVEQAAASEFIPNLQDAKGRTGFDAHVGERGVKLSG
                     GQRQRIAIARVMLKDAPILLLDEATSALDSEVEVAIQENLTQLMEGKTVVAIAHRLST
                     IMAMDRLIVLDKGEIVEQGTHEELLAQNGVYARLWAHQSGGFLPENTDI"
     gene            15248..16597
                     /gene="dnaA"
                     /locus_tag="PXE50_000309"
     CDS             15248..16597
                     /gene="dnaA"
                     /locus_tag="PXE50_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HDL5621249.1"
                     /translation="MEQIVSSLWSDCLNHLQTKVSPTDYSTWLRPLQASSENGELTLY
                     AQNQFVENWVKDKFLSEITELARFLAKNDNLVVTLKVGIKPTEQPKVSPNLKNESSEF
                     SNTGFKTGLNPNQTFDNFVQGRSNQLAKLVAQQVVDNLGESHCNPLSFYAGTGLGKTH
                     LLHAIGNELVKRTPGTRVLYIHLERFYRDIIKAINSSNNDAEKIKKFYRSLDVLMIDD
                     IQFLANKPKVQEEFLHLLNALFEQRKQIILTSDVLPKNIDKIDTAIKSRLSGGISATI
                     EPPELETRVAILRQKALERGADLQEDAAYLMGQKLRTNVRELEGALNRVIAWQKLTLR
                     PITVDAVRETLQDLFASFDYLITIENIQRIVAEYYGIKVADIKSKSRARSIARPRQMA
                     MALAKELTNHSLPEIGREFGGRDHTTVMHACKTINELRDTESGIQEDYIHLTRKLSS"
     gene            16616..17719
                     /gene="dnaN"
                     /locus_tag="PXE50_000310"
     CDS             16616..17719
                     /gene="dnaN"
                     /locus_tag="PXE50_000310"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HDL5621250.1"
                     /translation="MQITITREQLLKPLQQVCGVLSSRPTLPVINNLLLEIEGNRLSL
                     TGTDLEVELTTQAQLLQAVDFAGKFTIPAKKFLDISKSLPDDSVISVQFEEDKAIIKA
                     GRSKFSLATLPASDYPNLMDWKPEVDFSIDQSTLARLIDATQFSMANQDARYFLNGMK
                     FETEGNLLRTVATDGHRLAVCTMVLNQELLTHSVIVPRKAVLELSRLVASNDETVRLE
                     IGSSNIRITMNGIVFTSKLIDGRFPDYRRVLPRNADRILEAETETLKRALMRAAILSN
                     EKFRGVRLTLSNNLLKITANNPEQEEAEEIIDVAYDSPEMEVGFNVSYVLDVLNTLKC
                     QRVRFSLVDSSSSCLIEDCDNSSAEYVIMPMRL"
     gene            complement(17782..18402)
                     /locus_tag="PXE50_000311"
     CDS             complement(17782..18402)
                     /locus_tag="PXE50_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDL5621251.1"
                     /translation="MSNEYLNKTEEQQFEDAKNWFKENGTPILVAIILACAATAGWNF
                     WKNHQLETAQKTSASYQSVMESYLQNPSKNQPLVEKFIADNKDSSYAAFAQFEVAKQA
                     VEKGNFSAAKTALQSVLTYSDSTLQSIARFRLAQIDFQLKSYDEALASLAQIQDKAWE
                     LRKQILTGDILAAKGDIPAAKSAYEQAKTTANPQEQTLIDVRLNNL"
     gene            complement(18412..19683)
                     /gene="hisS"
                     /locus_tag="PXE50_000312"
     CDS             complement(18412..19683)
                     /gene="hisS"
                     /locus_tag="PXE50_000312"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HDL5621252.1"
                     /translation="MAKTIQAIRGMNDCSPSESPLWQWVEQKVRNVLASYGYSEVRMP
                     IVESTPLFARAIGEVTDVVSKEMYTFWDNDEQLTLRPEGTAGCVRAAIERGWIYNNEQ
                     RLWYMGPMFRHERPQKGRYRQFHQAGVEVFGIANPEIDAELIILTARLWKELGIDQHV
                     SLQLNSIGSLEARANYRSALVKFLENHTALMNEEEKERLVKNPLRILDTKNEALQNVL
                     NDAPKLLDYLDDDSREHFTQLCALLDAMGIRYEVNPKLVRGLDYYNKTVFEWVTSALG
                     SQGTVCGGGRYDGLVEQLGGHATQGVGFAMGLERLVLLVQEVNKEIDLPKTVDVYIVF
                     SGEGATLNAFQLAEQIRSELPHVGVMTHCSGGKFQKQFKRADKVEAQIALVIGESEVA
                     EKQVVIKDLRSGAEQITIAQSELIAELSKRF"
     gene            complement(19689..20801)
                     /gene="ispG"
                     /locus_tag="PXE50_000313"
                     /gene_synonym="gcpE"
     CDS             complement(19689..20801)
                     /gene="ispG"
                     /locus_tag="PXE50_000313"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HDL5621253.1"
                     /translation="MIHQSPIKRRVSKKIYVGNVPVGGDAPITVQSMTNTRTTDVEAT
                     VAQIKSLERVGADIVRVSVPTMDAAEAFKAIKQQVSVPLVADIHFDYRIALKVAEYGV
                     DCLRINPGNIGNEERIRTVVDCARDKNIPIRIGVNAGSLERDLQEKYGEPTPQALLES
                     ALRHVDHLDRLNFDQFKVSVKASDVFLAVESYRLLAKQIDQPLHLGITEAGGARAGSV
                     KSAVGLGLLLAEGIGDTLRVSLAADPVEEVKVGFDILKSLRIRSRGINFIACPTCSRQ
                     EIDVIATVNELEQRLEDIITPMDVSIIGCVVNGPGEALVSDLGVTGSNKMSGFYLDGV
                     RQKERFDNAKLIDQLEAKIRARVAQQHNRIDIEQIG"
     gene            complement(20902..21900)
                     /locus_tag="PXE50_000314"
     CDS             complement(20902..21900)
                     /locus_tag="PXE50_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4115 domain-containing protein"
                     /protein_id="HDL5621254.1"
                     /translation="MTESVNSTQAGTALSLGQQLKAAREALNLSITDVAQKTNLKKSH
                     IESLENDIFILQNVAPTFVRGYVRNYVKFLRLPESLISSVNYGEVTIPKEVTKVSSVK
                     PSSNSQGKTLKYLTVLVLLAALGMTLLWWWQGYQKEQENREQFVSSAPVAEVANTATN
                     NDASAQTSVPVQQPIQVSEQPAQVAETVVAAEPALTEKVEPTQAASSPVTQEDVKVVE
                     EVKQADATTAQVEAVNVLQQSQSEQAPTEQPVAVTNDELRIEITGSQSWITVRGAKNK
                     RLAEKLYNNGETLSFNENEQYRLTIGAPANVKVYYKGQEVPLKIDGRVARIHLPLQ"
     gene            complement(22068..23447)
                     /gene="argH"
                     /locus_tag="PXE50_000315"
     CDS             complement(22068..23447)
                     /gene="argH"
                     /locus_tag="PXE50_000315"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HDL5621255.1"
                     /translation="MALWGGRFTQQADAKFKYFNDSLRFDYRLAIQDIEGSIGWAKAI
                     TSVGILTVAELEQLIAALKEVRAEVESNLTIILKDDAEDIHSWVESKLIEKVGDLGKK
                     LHTGRSRNDQVAVDIKMWCKVQAVALQERIRALQERLVSVAEENQESVMPGYTHLQRA
                     QPVTFAHWCMAYYEMLERDFSRLSDANKRMSTCPLGSGALAGTAYGIDRDLLARDLGF
                     EEATRNSLDSVSDRDHILELLSTASISMMHLSRFAEDLIIFNSGESGFLEMSDRVTSG
                     SSLMPQKKNPDACELIRGKSGRVFGALNGLLTTLKGLPLAYNKDMQEDKEGIFDALET
                     WQACLEIAELVLVDIQVNTERTREAAQQGYANATELADYLVAKGVPFREAHHIVGEAV
                     VYAISKKEPLEALSINEFQQFHHSIGDDVYPILSLESCLEKRCAKGGVNPQRVAEAIA
                     VAKANLASK"
     gene            complement(23564..24727)
                     /gene="mnmA"
                     /locus_tag="PXE50_000316"
     CDS             complement(23564..24727)
                     /gene="mnmA"
                     /locus_tag="PXE50_000316"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HDL5621256.1"
                     /translation="MTTQLTSKTYDTHFPKLTPEQLAENSKKKVIIGMSGGVDSSVSA
                     FILQQQGYQVEGLFMKNWEEDDDTDYCTAAAELADAQAVADKLGMKLHKINFAAEYWD
                     NVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEYAAEDLGADYIATGHYVRRTSDDQD
                     AKLLRGLDENKDQSYFLYALNKKQIGQSLFPVGEIEKPIVRAIAEDLGLATAKKKDST
                     GICFIGERKFKDFLARFLPAQPGEIRTVEGKLVGRHDGLMYHTLGQRKGLGIGGVKGL
                     SEDPFYVVEKDLINNVLIVAQGHDNSALLSSGLIAKQLTWVDMQPLRENLRCTVKTRY
                     RQADIACEIQVIDDETIRVMFDEPQIAVTPGQSAVFYLGEVCLGGGIIESQLK"
     gene            complement(24838..25149)
                     /locus_tag="PXE50_000317"
     CDS             complement(24838..25149)
                     /locus_tag="PXE50_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HDL5621257.1"
                     /translation="MPNFGLSERATKTITDILAKYPEVEQAIIYGSRAKGNYREGSDV
                     DLTFKGKDLTYDIVKRIWGDLDDSDSPYLFDLSIYHQLTNANFIEHIDRVGKVFYQRE
                     L"
     gene            complement(25131..25547)
                     /locus_tag="PXE50_000318"
     CDS             complement(25131..25547)
                     /locus_tag="PXE50_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase substrate binding
                     protein"
                     /protein_id="HDL5621258.1"
                     /translation="MNRDIRWKQRFDNYKKSVSYLQAEAEKYADTDIDVIKKGIIQSF
                     EITHELAWKLMQDILKWEGEVDIYGSKTASRLAFNRGLITQGEVWLEMIKSRNITVHT
                     DDETILTEEFNKIIKAYLPLFIEFEQRVETLCQTLD"
     gene            complement(25549..25794)
                     /gene="nqrM"
                     /locus_tag="PXE50_000319"
     CDS             complement(25549..25794)
                     /gene="nqrM"
                     /locus_tag="PXE50_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Na+)-NQR maturation NqrM"
                     /protein_id="HDL5621259.1"
                     /translation="METVLLTFGFFVAVIFAMSIGFIVKGKTIKGSCGGITALGMKKM
                     CDCEEPCDNLKSKIADGTADPEEVARFNKEPQFYEVK"
     gene            complement(25807..26841)
                     /locus_tag="PXE50_000320"
     CDS             complement(25807..26841)
                     /locus_tag="PXE50_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HDL5621260.1"
                     /translation="MKKFFLLLIAFFTLSACEKAPEQITLSGKTMGTTYTVKYIDNGE
                     VENLISPEKMKNELDGLLIEVNNQMSTYQQDSEISRFNQAKQANQAVEISQDFAKVVQ
                     EAIRLNKVTEGALDVTVGPLVNLWGFGPDKRLNKVPSDEQIAERSAYVGIDKILLEMS
                     SKPKLTKSAANLYLDLSSIAKGFGVDKLAEHLETIGVSNYLVEIGGELRGKGKNLQGL
                     DWRIAIEKPVMTQGQAAQITVPLHNLAMATSGNYRNYFEDEKGNRLSHIIDPKQLRPV
                     NHNLASITVFAPTTMTADGLSTGLFVLGAEKALAVAEREKLAIFLIVKNGDKFETQMS
                     SEFSKLIQSQ"
     gene            complement(26890..27183)
                     /locus_tag="PXE50_000321"
     CDS             complement(26890..27183)
                     /locus_tag="PXE50_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HDL5621261.1"
                     /translation="MIDLTESQRQQVLDIFKKYLPDTPVWVFGSRIKGTAKAYSDLDL
                     ALITKQPLTIRQQTELELAFTDSDLPFTVDLIDWASCNESFKQIILQRYEVLI"
     gene            complement(27176..27610)
                     /locus_tag="PXE50_000322"
     CDS             complement(27176..27610)
                     /locus_tag="PXE50_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase substrate binding
                     protein"
                     /protein_id="HDL5621262.1"
                     /translation="MEQLDITVLENAFNSLEKTIVSLENQAWFNRQEAIIQDTLIAGA
                     IQKFEFVYELSIKMLKRQLKNIESNDTDIDSTEFRDILRMAAQYGLIESPEVWLDYRK
                     MRNITSHTYDQNKAQQVYNGISNFLESTYFLVKQLQKRNSYD"
     gene            complement(27722..28951)
                     /gene="nqrF"
                     /locus_tag="PXE50_000323"
     CDS             complement(27722..28951)
                     /gene="nqrF"
                     /locus_tag="PXE50_000323"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit F"
                     /protein_id="HDL5621263.1"
                     /translation="MDSNFIFGIIAFTALVLVLAVIILFAKSKLVDSGDITISINNDP
                     EKGITLPAGGKLLGALASKGIFVSSACGGGGSCGQCKVQVKSGGGEILPTELSHISKK
                     EAKEGWRLACQVNVKSSMDVELPEEIFGVKKWECTVISNDNKATFIKELKLQIPEGEE
                     VPFRAGGYIQIEAEPHTVHYKDFDIPKEYHEDWDKFDLWRYTSKVDEHIIRAYSMASY
                     PEEKGIIMLNVRIATPPPRNPDVPPGQMSSYIWSLKPGDKVTISGPFGEFFAKDTDAE
                     MVFIGGGAGMAPMRSHIFDQLKRLKSKRKMSFWYGARSEREMFYVEDFDGLQAENDNF
                     KWYVALSDPLPGDREDYFRGFIHNVLYENYLKNHEAPEDCEYYMCGPPVMNAAVIGML
                     KSLGVEDENILLDDFGG"
     gene            complement(28962..29558)
                     /gene="nqrE"
                     /locus_tag="PXE50_000324"
     CDS             complement(28962..29558)
                     /gene="nqrE"
                     /locus_tag="PXE50_000324"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005529392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit E"
                     /protein_id="HDL5621264.1"
                     /translation="MEHLLSIFVKSIFIENMALSFFLGMCTFLAVSKKVSTAFGLGIA
                     VIVVLGIAVPANQLVYTHVLKEGALVEGVDLSFLNFITFIGVIAALVQILEMILDKFF
                     PALYSALGIFLPLITVNCAIFGGVSFMVQREYNFVESVVYGVGAGTGWMLAIVALAGL
                     TEKMKYSDVPAGLRGLGITFITVGLMALGFMSFSGIQL"
     gene            complement(29560..30186)
                     /locus_tag="PXE50_000325"
     CDS             complement(29560..30186)
                     /locus_tag="PXE50_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005717817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit D"
                     /protein_id="HDL5621265.1"
                     /translation="MADNNNLKKLLLSPIVDNNPIALQILGICSALAVTTQLQTAVVM
                     AIAVSLVTAFSSMFISMIRNYIPNSIRIIVQMAIIASLVILVDQILRAYAYDLSKQLS
                     VFVGLIITNCIVMGRAEAFAMKSGPVESFVDGIGNGLGYGAMLIIVAFLRELIGSGKI
                     FGITILETVQNGGWYQANGLFLLAPSAFFIIGFVIWAIRTWKPEQVEK"
     gene            complement(30186..30959)
                     /locus_tag="PXE50_000326"
     CDS             complement(30186..30959)
                     /locus_tag="PXE50_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit C"
                     /protein_id="HDL5621266.1"
                     /translation="MAKFNKDSVGGTLTVVVLLSLICSLIVAGAAVMLKPTQDIQKQL
                     DKQKNILQAAGLLQKDTNVQETYTKFIEPKIVDLATGDYVEGVTGFDARAAAKDPAQN
                     VVIAPEDDKANIKTRAKYAEVYLVKDESGKTTQVVLPMHGNGLWSIMYGFVAVQPDAN
                     TVNGITYYEQGETAGLGGEIANPNWQKNFVGKKLYNEQNQVALRVGKGVSADKDHGVD
                     GLSGATLTSNGVDGSFKYWFGQNGFGPYLAKFKAAAGAN"
     gene            complement(30952..32187)
                     /locus_tag="PXE50_000327"
     CDS             complement(30952..32187)
                     /locus_tag="PXE50_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit B"
                     /protein_id="HDL5621267.1"
                     /translation="MGLKNLFEKMEPAFHKGGKYEKWYTLFEAAYTIFYTPGTVTRKD
                     AHVRDAIDSKRMMLIVWLALFPAMFYGMYNVGAQGILAALKMGTLTDLVANNWHYSLA
                     DSLGSVADAGWGTKMLLGATYFLPIYLTVFAVGGFWEVVFAMVRKHEINEGFFVTSIL
                     LALIVPPTLPLWQAALATTFGVVVAKEVFGGVGKNFMNPALAGRAFLFFAYPGQISGD
                     AVWVAADGFSGATALSQWAVGGQGALQHVATGETITWMDAFLGNIPGSIGETSTLMLI
                     IGAAIIVFARIASWRIIAGVMIGMAATATLFNVIGSDTNPLFSMPWHWHLVLGGFAIG
                     MFFMATDPVSAAFTNKGKWAYGILIGFMCVLIRVVNPAYPEGMMLAILFANLFAPIFD
                     YLVVQGNIKRRLARVANNG"
     gene            complement(32190..33548)
                     /locus_tag="PXE50_000328"
     CDS             complement(32190..33548)
                     /locus_tag="PXE50_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit A"
                     /protein_id="HDL5621268.1"
                     /translation="MITIKKGLDLPIAGKPEQVIHNGNTVTEVAMLGEEYVGMRPSMK
                     VREGDVVKKGQVLFEDKKNPGVVFTAPASGTVTAINRGEKRVLQSVVIKVEGDEQITF
                     ARYEASQLASLTSEQVKQNLVESGLWTAFRTRPFSKVPALDAEPSSIFVNAMDTNPLA
                     ANPEVIIAEHQQAFFDGLTVLSRLFESKKVIHLCGSADSNILNAAQSRQINNVETNRF
                     KGPHPAGLSGTHIHFIDPVGATKQVWYLNYQDVIAIGKLFTTGELFTDRVVALAGPQV
                     KNPRLVRTRLGANLSQLTANELNAGENRVISGSVLSGAIATGVHDYLGRYALQVSALL
                     EGREKAFFGMIAPYSDKYSITRTTLGHFAKKLFNFTTAVHGSERAMVPTGAYERVMPL
                     DIIPTLLLRDLAAGDTDSAQALGCLELDEEDLALCTFVCSGKNNWGPLLRQALDKIEK
                     DG"
     gene            33995..34591
                     /gene="nfuA"
                     /locus_tag="PXE50_000329"
     CDS             33995..34591
                     /gene="nfuA"
                     /locus_tag="PXE50_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010944401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S biogenesis protein NfuA"
                     /protein_id="HDL5621269.1"
                     /translation="MEEQTIHISISDAAQAHFARLLEQQEEGTNIRIFVVNPGTPGAE
                     CGVSYCPPNAVEETDTEFKFNRFSAFVDDISLPFLDEAEIDYVTDPMGSQLTLKAPNA
                     KMRKVADDAPFIERLDYVIQTQVNPQLASHGGKVTLIEITEDKYAVLQFGGGCNGCSM
                     VDVTLKEGIEKQLLAMFPDELVGVKDITEHQHGEHSYY"
     gene            complement(34759..36396)
                     /gene="pyrG"
                     /locus_tag="PXE50_000330"
     CDS             complement(34759..36396)
                     /gene="pyrG"
                     /locus_tag="PXE50_000330"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase (glutamine hydrolyzing)"
                     /protein_id="HDL5621270.1"
                     /translation="MTTNYIFVTGGVVSSLGKGIAAASLASILEARGLNVTIMKLDPY
                     INVDPGTMSPTQHGEVFVTEDGAETDLDLGHYERFIRSKMSKANNFTSGKIYSEVLRK
                     ERRGDYLGATIQVIPHITNEIKARVLEGGKGRDVAIVEVGGTVGDIESLPFLEALRQL
                     AVDIGREKTLFMHLTLVPYIPTAGEVKTKPTQHSVKELLSIGIQPDVLICRSDRAIPE
                     NEKKKIALFCNVPERAVISLKDVDSIYRIPELLKSQGLDSFVCDRFRLDCKEADLSEW
                     EQVLYCQANPTGEVTIGMVGKYVELPDAYKSVNEALKHAGLTHRLTVNIKYIDSQDIE
                     TKGTELLAGLDGILVPGGFGYRGVEGKIRTAQYARENKIPYLGICLGMQIALIEYARN
                     VAGLTEANSSEFDKDCSQPVIGLITEWQDAEGNVETRSDESDLGGTMRLGSQQCHLIE
                     GSKARELYGAETIVERHRHRYEVNNKLLPQIEAAGLKVSGLSADRKLVEIIEVPNHPW
                     FIAAQFHPEFTSTPRDGHPLFAGFVKAAKDHQESRKA"
     gene            36660..37709
                     /gene="ansB"
                     /locus_tag="PXE50_000331"
     CDS             36660..37709
                     /gene="ansB"
                     /locus_tag="PXE50_000331"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-asparaginase 2"
                     /protein_id="HDL5621271.1"
                     /translation="MKIKKLLLPTLLSIATMPIQAADLPNITILATGGTIAGSQKNTA
                     TSAYQAGQLNIETLIEAVPDIKKLANIKGEQIVKIGSQDMSDEVWLKLAKAINQQCPN
                     TDGFVITHGTDTMEETVYFLDMTVKCEKPVVLVGAMRPATEKSADGVLNLYNSVVVAK
                     DSKSSGRGVLVAMNDIVLGARDVTKTSTTSVQTFNSPNFGALGYIHNSKVDYERSPES
                     KHTVNTPFKVDELTELPKVGIIYAYSNMPTEPLQALLDASYQGIVVAGVGNGNMNAAN
                     LALLEEAAKKGITVVRSSRVPTGYTTRDAEIDDSKYGFIASGTLNPQKARVLLQLALT
                     QTNDIKTIQQYFEDF"
     gene            complement(37783..38427)
                     /locus_tag="PXE50_000332"
     CDS             complement(37783..38427)
                     /locus_tag="PXE50_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621272.1"
                     /translation="MRIWQKLASVIVVTLGLISNASAENFKLKYSSNYLMPAYINFNN
                     GGGQYNIQAKINVPLYNIVFSAKGTEKNEQFHMLSYRDTRNGKTYAMAEIDSKTVKYG
                     KVKEPLKEEALTMPTYDLFTTAFQLSYYDKLPSSFQTTNGKKLYPTPNVQLRKAQKEV
                     KVGGKTYQEITYKFRTSDKKDITVKKFEGEKFPRYIAYSRDGDNYELTFDSFVK"
     gene            complement(38428..39411)
                     /gene="cysB"
                     /locus_tag="PXE50_000333"
     CDS             complement(38428..39411)
                     /gene="cysB"
                     /locus_tag="PXE50_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator CysB"
                     /protein_id="HDL5621273.1"
                     /translation="MKLQQLRYIVEIVNQNLNITEAAEVLYTSQPGISKQVRLLESEL
                     GINIFERNGKHVKGLTPAGEKIVAIARELLVKAQSIKSVAEEQTRPNKGILRIATTNT
                     QARYMLPSVIEKFKARYPEVSLHLHQGSPNQIYDALVAGEVDLAITTEAQYLFDEAVL
                     LPCYWWNRSVIVKPEHPLAAFVNQSKNLTVEQLGRYDLITYTFGFTGQSDLDHAFNKE
                     GILPNIVFTATDADVIKTYVRLGLGVGIMASMAHTETDKDLVAINASHLFQPSMTQIA
                     FKRGTFLRNYMYDFINYFSPHLTRVQVEKAEQLRDNNAISRLFESISLEEK"
     gene            complement(39408..40091)
                     /gene="yjjG"
                     /locus_tag="PXE50_000334"
     CDS             complement(39408..40091)
                     /gene="yjjG"
                     /locus_tag="PXE50_000334"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HDL5621274.1"
                     /translation="MKYQWVLFDADETLFSFNSYLGLKAMLARYQIDFSEQDYQDFQA
                     VNKPLWVAYQNNEITAQDIQTRRFVKLSAQTGVDPLQLNQELMAEMAFVSQPLEGVMD
                     MLNALYGKVKMGIITNGFTDLQQKRLDNTQTSHFFDIVVISEQIGAAKPDRQVFDYAF
                     ALMDEFDRTKVLMVGDTLASDILGGNNAGIDTCWLNLLSKENDTDIKPTYEVHTMQQI
                     IAIVEGKSL"
     gene            complement(40167..41060)
                     /locus_tag="PXE50_000335"
     CDS             complement(40167..41060)
                     /locus_tag="PXE50_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GcvA"
                     /protein_id="HDL5621275.1"
                     /translation="MNKKLPPLNALKAFESAARHLNFTKAAEDLFVTQAAVSHQIKLL
                     EDFLGASLFHRRNRLLELTELGAQYFYEVQPLLEQIALATDKIRQQSSRQILTISVPQ
                     TFGMHWLVPRLADFHEKYPEVEVRIKGVDQDEGLLGKETDVAIYYGKGDWQGLESIRL
                     TESRIVILASPEYLSQNTIHLPADLAGKHLLHSSTHNKWKRMVEHLHIEDIVDAETGS
                     IFSHTFMVLQAAMHQQGIAIANQLLAQHEIEKGTLIEPFPTTLFDEKSFYVVYPSQSA
                     QVQKVQFFVEWIQQKMKECCA"
     gene            41506..42543
                     /gene="rsgA"
                     /locus_tag="PXE50_000336"
     CDS             41506..42543
                     /gene="rsgA"
                     /locus_tag="PXE50_000336"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="small ribosomal subunit biogenesis GTPase RsgA"
                     /protein_id="HDL5621276.1"
                     /translation="MSKPKLTHNQQRRIQSNHHKRINKKEIEWQDEMLGEMQQGIVVT
                     RHVKHADVETAEGQIFRCNIRRTLKNVVVGDQVSWRKGSEQLQGISGVIEAVFPRKNE
                     LTRPDYYDGIKVMASNIDQIIIVSAVLPTLSLNIIDRYLVICETANIPALIVLNKIDL
                     LNESERQAVKEQLKIYEEIGYETLCLSADTGENMQALHQYLAKGTSIFVGQSGVGKSS
                     LINQLLPEVNALTGSVSDNSGLGQHTTTASRLYHLPQGGQLIDSPGIREFGLWHLEPE
                     QITLGYREFQSVLGTCKFRDCKHKTDPGCALRQEVENGEISAIRFENYHRLIESLSET
                     KSQRHFRKEEV"
     gene            42540..43139
                     /gene="rnhB"
                     /locus_tag="PXE50_000337"
     CDS             42540..43139
                     /gene="rnhB"
                     /locus_tag="PXE50_000337"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HDL5621277.1"
                     /translation="MMNEFIYPNARLIAGVDEVGRGPLVGAVVTAAVILDPNNPIQGL
                     TDSKKLSEKKRQALAEEIKAKALSWSLGRAEPTEIDELNILNATMLAMQRAVAGLHIQ
                     PDFVLIDGNRPPKLPMPAQAVVKGDSLVAEISAASIIAKVARDQEMDELDQQFPQYGF
                     AQHKGYPTKLHFEKLAEFGATPYHRKSFAPVRKVLGLID"
     gene            43152..43511
                     /locus_tag="PXE50_000338"
     CDS             43152..43511
                     /locus_tag="PXE50_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HDL5621278.1"
                     /translation="MTTEYQKTIFTKIINKEIPANIVYQDELVTAFRDIAPQAPTHIL
                     IIPNKFIPTVNHVSNEDELALGRLFTVAAKLAQEEGIAEEGYRLVMNCNKNGGQEVFH
                     IHMHLLGGQKLGPLVAK"
     gene            43514..43885
                     /locus_tag="PXE50_000339"
     CDS             43514..43885
                     /locus_tag="PXE50_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcfL family protein"
                     /protein_id="HDL5621279.1"
                     /translation="MRISYFAFAIFSIFLTACGSKPVSYLPTGSEPIVNIESDIAEKI
                     ELETNSKQFSTTNLTEFPLNLTYKLFWYNKDGVTQSHNGISDSIGWQHLWLQPKQKQT
                     IALIKPTEESHNYRLYLRGVK"
     gene            complement(43920..44549)
                     /locus_tag="PXE50_000340"
     CDS             complement(43920..44549)
                     /locus_tag="PXE50_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDL5621280.1"
                     /translation="MFNLQIIPVSPFQQNCTVIWDENKNAAIIDGGDNAEGIIQFVES
                     QQLKVQKLLITHGHLDHIMAVEKLREHFQVEVFGSHLADKPLFERLPEMCQQFGLPPV
                     NGFLPDHWLEEGDRVEVGELSYTVRHLPGHAPGHIGFFDFDNRIAFSGDVLFQNSIGR
                     TDLYLGNHSQLLETIREKMFDLDDDFIIIPGHGPHTTIGREKQTNPFLK"
     gene            complement(44566..45120)
                     /locus_tag="PXE50_000341"
     CDS             complement(44566..45120)
                     /locus_tag="PXE50_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcbK family protein"
                     /protein_id="HDL5621281.1"
                     /translation="MKQINVQRRKWLSLGGLVLGASLLPGQVMAALSTPAPAALRFRN
                     VNTGDTYTAKFGAGGLNKTDLSQLNYLMRDRHINQVKAIDPKLFVKLNQLQRRLGFHN
                     AEILVLSGYRSAQTNARLRRRSRGVASHSYHILGQAVDFQVSGVPLYKVKQAAESLNN
                     GGVGYYPRSNFVHVDTGPVRTWRG"
     gene            complement(45290..46795)
                     /locus_tag="PXE50_000342"
     CDS             complement(45290..46795)
                     /locus_tag="PXE50_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010129962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HDL5621282.1"
                     /translation="MVAFSGMALAETATVAQVASEPVVQDNILPQLSFAAQQARAAEL
                     VKQADYALEQEQIRQEQARKFAEAEARIKQEIGNNALLLSQATTKVYLDSEFATMWND
                     KAAEKAFLKEYALFAVSGVSSKSAKALQQILNQPEGLGRDILLTDGFLDYLYYNKNVF
                     KNANNWLYNLGSYVPKSPSSEQIFQWTNAVREGDSGQFVTDLVPRNHLYRDTAQRVLA
                     MAGGSSAPKAKKGKAVTEVAGGGNGASFYKLALNAQRLRIIPSFNNGIFVNIPSYQLY
                     YFRDGNLALQSKVIVGREDRRTPVMYSKLSNVVVNPPWNVPTSIMTKDIIPKLARDPG
                     YADRASFEILDSSGNKINPRSVNWSQYLNAKSSPYRIRQKAGDDSALGRYKFNMPSSD
                     AIYLHDTPNRGLFGKTGRALSSGCVRVEKSDELATILLKEAGWGSDKKNQVLGSKKTT
                     SAQIRSDNPVYLYYVTAWVEGGKVQTLPDIYNFDAKIPQHSVNWGKLKSII"
     gene            complement(46913..48925)
                     /gene="prc"
                     /locus_tag="PXE50_000343"
     CDS             complement(46913..48925)
                     /gene="prc"
                     /locus_tag="PXE50_000343"
                     /EC_number="3.4.21.102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy terminal-processing peptidase"
                     /protein_id="HDL5621283.1"
                     /translation="MKLTRLNKIFALALGLMIGNAFAVQPDIKESAIVMPKPNEQHSL
                     STKRVTARLTQSHYHKFQLNDEFAGKIFNRYVDWLDPSHNTFLQADIDEMRSKYATTL
                     DDDLYAGKLDAAFAMYELMSKRRYERYSYALSLLDKEPDLKGNDEIEIDREKAAFPKS
                     VEEANTLWEQRVKNDIINLYLKDKKWPEIKKTLTKRYNFAIKRLTQVKADDILQTYLN
                     SFSREIDPHTSYLSPRAAKAFQESMNLSLEGIGATLTQEDDVTSIRALVPGAPAAKSK
                     KLVVGDKIVGVGQGERGEIEDVIGWRLDNVVDKIKGKKGTKVRLEIEPEKGGKTKIIT
                     LVRDKVRIEDSAAKLTVEKVDGKNVGVIKIPTFYIGLTSDVRKLLTQIEKKNVEGLII
                     DLRENGGGSLTEVIELTGLFIKDGPVVQVQDAFNRIKVHEDPESKSVYDGKVMVMINR
                     HSASASEIFAAAMQDYNRAIIVGQQTFGKGTVQQSRSLNFVYDLDQEPLGFIQYTIQK
                     FYRINGGSTQLKGVEADIKFPEIINAAKTGESFEDNALPWDKIPAANYKEAGNARNAV
                     AALTAKHQERIAKNPEFIVLNENIAIRKERDERKFLSLNLEERLKENKADESKRLKDI
                     NARFAREGKKALKDIDDLPKDYEAPDFFLKEAEQMMLDWSEFDKKS"
     gene            complement(49011..49535)
                     /gene="proQ"
                     /locus_tag="PXE50_000344"
     CDS             complement(49011..49535)
                     /gene="proQ"
                     /locus_tag="PXE50_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone ProQ"
                     /protein_id="HDL5621284.1"
                     /translation="MEQKVEQTQNKTNPSTKEVIAYLAEKFPLCFTLEGEVKPLKVGL
                     FQELAEALKDDEKISKTLLRQVLRNYTNSWRYLAASQANVARVGLQGEEVGVVTEDEA
                     THAAEALAAAKAVVAERKAQERKAQRKEYFKQKAREENAKKRAEFKAKKAIDNLPKAS
                     EEKLAALADKFGRK"
BASE COUNT        14768 a        10707 c         9324 g        14741 t
ORIGIN      
        1 acccataaaa atcagctaaa aatttgctct atgtctcaaa aatgagattt gccgtttgaa
       61 tcgcccaaaa aattggctta gactaaattg gtctaaactt ccataacatt taggagaaat
      121 tttatgtgtc aaagtaaaaa agttgccctt ttaggtgctg caggtggaat cggtcaatca
      181 ctcgccttat tattaaaact caatttaccg gctaaatctg aattatctct ttacgatatt
      241 tcccctgtta ctccaggaat tgcagtggat ttaagccata ttccaactga tgtaaaagta
      301 accggttttg caggtgaaga tccgactgag gcactaaaag atgccgatgt ggtcgttatt
      361 tctgctggtg ttgcccgtaa gccggggatg acacgtgccg atttattcaa tacgaatgcc
      421 actatcgtgc ataacttagt cgaaaaagca gcgaaagttt gccctaaagc ttgcattgca
      481 attattacta acccggtaaa caccattatt ccgattgcgg cagaagtatt gaaaaaagcc
      541 ggtgtgtatg acaaaaataa acttttcggt gttacaacat tagatgttat tcgagcgaat
      601 acctttgtgg ctgaagcgaa agacgtaaat gtgaaatatg taagagtgcc tgtgattggc
      661 ggacattccg gcacaactat tcttccactg ctttcacaag caacagtaaa tggcttaaaa
      721 cttgagttca ctcaagaaca aatcgagcaa ttaactcatc gtatccaaaa cgccggtact
      781 gaagtggttg aggcaaaagc aggtggtggc tcagcaacct tatctatggc tcaagcagga
      841 gcagaatttg cacttggttt agtgagagcc ttaatcgggg aagatgtcat tcgttatgct
      901 tatgtagata atgccaatgg cgaaacctct ccggcattct ttgcttaccc gattcgttta
      961 ggtacaaatg gtgtggaaaa agttctacct atcggcaatc tcagcgaatt tgaaaaagat
     1021 caactagagc agttaattcc tgtattaaat gatgaaattc agttaggaca aacttttaat
     1081 aaaaatgctt aaggcataac tttaagggtt gagaaatcag ccctttttaa cattctctca
     1141 attaaaaata taaaaacgga aattacccat gaaaaaacac catatcatta tacttacatt
     1201 ggcttcagca tcggttgtag cttgcagctc gaacaccccc gttcaagtcg taaatggcga
     1261 caaaaatata gactattctc aacctaaaac gatctatatt agtgaaacca atactcaacc
     1321 gccagcccta actaaacagg aaaagattaa accatcgaat gctactgctc tttgttttaa
     1381 cggtagttac tctactgata ttcagaatcc ttgcaagaaa gatggcggag ttaagcaata
     1441 ttttgcccat catcacgcca attaaaaatc ctataaaaaa tgcacaatgt atcttaccat
     1501 tgtgcatttt ttctatgttt tattttctga tttttctggc tgctcttttt ccggttcagg
     1561 gtcaaacttc accacaggga cacaacctcg gcaagcacct tgatttaccc ctagctcatc
     1621 gcaaaaggca tcatatttct caagggcttt tttaaaccag cctttctttt ctgtttgctc
     1681 gctcatcatc tcttcctttt atgttgaatt attaatgcaa gcggtcaaat tttgctgaat
     1741 ttttccactt gtcatcatta attgcaggaa ttgctaatca cggaaattat taaattggaa
     1801 tggctgccct aaatctgccc ctttcactag ctgaattgcg gcttgtaaat catcacgaga
     1861 tttgcccgtt acacgcactt gctcgccttg aatttgggct tgaaccttga ttttagaatc
     1921 cttaatcagc ttggtaattt tcttcgccat atctgactca atcccttgct tgagcttaat
     1981 ttctttggaa tagagtttac cgtgatgctc actttctgta gggatatcta atgaactatg
     2041 ctcgatccca cgttttacac aagagccgat taaaatctca attaactgct ctaattggaa
     2101 atccgattcg gtcgtgagct taatgctttc atttttttca tttaactcaa taacggcttc
     2161 caccccacgg aaatcgtagc gggtgcttaa tacacgattg gcattttcta ccgcattacg
     2221 cacttcgtgc atcgtgattt cagatacaat atcaaatgat ggcattgttg ttcctctcaa
     2281 ttaatgttga aataaatgat tggcattaag taataaacat aatgccgtta agtccccgaa
     2341 gtttaccaca aaatcagctt gtgcttgcac ttttggttta gcgtgcaaag caacgcctaa
     2401 actggcggtt tttaacattg gtaagtcatt tgccccatcg ccgactgcca cccattgatt
     2461 tggtggaata ttaaaggttg tcgctaaatt ctgtaaggta tcggctttat gttgagcatc
     2521 cactactttg cctaacacct tgccggttaa tttaccgtca ataatttcca gttggttaga
     2581 gaccgcaaaa ttcaacccgt atttttgttt taagtaatcg gcgaagtaat caaatccacc
     2641 ggacgcaatc gctaatttcc agccgtgttc cttaagaata gcaaccatct gctcaaagcc
     2701 gtccataagc ggtagatttt cccgcacttt ttgcaaaatg ctttccgatg cattttccaa
     2761 cgtgccgact cgcttgcgta aactttgctc gaaatccagc tcgccccgca ttgcactggc
     2821 agtaatggcg gacaccacct cgccggtgcc ggcaagtttg gcaatatcat caatacattc
     2881 aattttaata gcggtggaat ccatatccat taatagcaaa ccgccttggt ttaaggttgg
     2941 aataatagtg agatcgctaa tatccgcatt gattttctgt gccgtttcac gcagctcgca
     3001 agcggttaaa tttgtggaaa aaaatgcaat tttgtagtct aaatagaccg cttgtttcag
     3061 caaaattgct gccgtttgtt gtgaaaactg ttcaatttca cgctcgttta aggtttttga
     3121 atagataaaa attgtgtttg tcattgtctt attttaggtt gtttaaattt actgcactaa
     3181 tctaacagaa aagcgtgcta caatcacgca tcattttgag ggaatttcga tgtacattag
     3241 tcgtgaaaaa ataacgaaaa cgcttttgct ggcagggatt acgctactct gctgtgggat
     3301 cgtggcggtt attttaatgg gcgtaaacca atttaagcta ggctcacaat tggccagcat
     3361 taatcaagta tcaaaccttt cacacctatt ggttcgccag caagcaaata ttttttcgtt
     3421 tttgttagtt aaaaatgcca aaaccgatga gctggttgat gcgttggata gttttgccaa
     3481 agaagatttt attattgatg ccaatatcta ttcaccaaat ggcgtgctac tggctcaaag
     3541 ccaaaatgcg aaagatttaa aagtattgct cgattcagag caatctgcca aaactcagca
     3601 aattgttgag ccaatatttt ctcaacaggc gttggttggc tttttacgcg tcacgtttga
     3661 tgcagaatat gggcaaacta ctaaagcacg agtagagcaa caatttcatc aactttatgg
     3721 ggaaataatt attttgctac tcacaggtat attgttggca agtagcatta actactattt
     3781 tcgtcgtaaa attcatcatg tacagataag cccaaaacca cttatgagtc aagtaaaaac
     3841 ccaaacccag cgttttcact cacgtcgccg ttggattaag cgtaaatagt ttacactcaa
     3901 atggataaac gattgtaatt tgagcgaata agcgtataat atccgccgtt tttcgccgaa
     3961 tggcatcata taaaaattaa aactttaaag aggaataaat ggctaaagaa gattgcattg
     4021 agatgcaagg tacgatttta gaaaccttac caaatacaat gttccgtgtg gaattagaaa
     4081 acggtcatat tgttaccgca catatttcag gcaaaatgcg taaaaactac attcgtattt
     4141 taaccggtga taaagtaacg gttgaaatga ctccatacga tttaagcaaa gcacgcatta
     4201 ttttccgtgc aagataattc agcataaaat aaggcgaaca attgtgttcg cctttttgtt
     4261 tggtttttta gttatttgct tttttagtta tttgcttttt tcaataatcc cttctgcaca
     4321 ggcaaaagca gatgaccacg cccattggaa attataacca ccaagccagc cggtaacatc
     4381 cagcacttcg ccgataaaat aaagccctgc tgtatttttc gcttccatcg ttttagatga
     4441 aatatagtcg gtatcaacac cgcctttggt tacttccgct gtacgatagc cttccgtgcc
     4501 gtttggcaag aaatgccaat ggtggataaa ttgctctaat aaggtcagat cttttttact
     4561 caaatcggca atcactttat cggtcagcaa tttctgttcc agccaaactt caaccaattt
     4621 tttaggtaaa taacgagata atacggtttt tagctgtaat ttcggcgaag attggcgtag
     4681 ttcgctcaat atatcggtaa tggactgcga aggtagcaga tcaatctcta ccgtttcccc
     4741 caattcccaa taattggaaa tctgcaaaat tgccgggccg gataagcctc tgtgcgtaaa
     4801 caacatctga ttgctaaaac ttttgccatt ggcggaaaca gtaatcggca gtgcaatgcc
     4861 ggaaagctcg gcaaaatatt tatcgctctc tttccaagta aaaggcacaa ggcttgcacg
     4921 tggtggcaca acaggaatac caaactgctc ggcaagttga tagccaaaag ggcttgcccc
     4981 gagagccggc attgaaagcc ctccggttgc aatcactaag tgttcggatt ggaacttgcc
     5041 acaagcggtc gaaatttcaa aaaaatttgc aactttttcc acagaaatga ccgcttgccg
     5101 taacagaatc tcaaccttgc ctttgttgca ttctgcttgt agtaaatcga caatttgttg
     5161 cgagctttca tcacaaaaca actgccctag ctctttttcg tgatagctaa tgccatagtg
     5221 gctgacaagc gaaataaaat cccattgggt ataacgtgaa agggcggatt tcacaaaatg
     5281 gcggttttgg ctaaggtaat ttccggcact tacgtctaaa ttcgtaaaat tgcaaaaacc
     5341 accgccagac attaaaattt tacgtccgac tttcttaccg ctgtctaaca ccaccacttt
     5401 tttgccagct tgccccagtt gggcagcaca aaacagccct gccgcaccgg caccaatcac
     5461 cacaacatca atattttgca ttaaaaattc agtaccttat ctgcttgaat tgtccaatct
     5521 gccagttcaa ttaatgtgcc aatctctacc ccatcggcta aaggcaaatc tgtaatccct
     5581 cgagcattag tacaggtttt gcataatttt acgtttgccc cttgggcggt taaaatttcc
     5641 agcatttgct gaatatgata accctctgcc ggattttgct ttgccagccc tgcggtgact
     5701 gcatccgaca ttaagaaaag tttaatttcc gtattggctt tatgttgttc ttgaatttgt
     5761 aatgccaaac gcaacgcact gaaaaacgtt tcattgccgt aaggagcaga attgatgata
     5821 aaaagaagtt tttgaactga attagacatt gttttacctc ggaatacacg aaacacatag
     5881 ataatgaatc aaataccctc tcccctttgt gggagaggga tagatttttc ttcgtttaga
     5941 agaaaaatca gggagagggg ggtagagctt aacccaccca cacaaattta gcaataaaga
     6001 gaagtgaaac cactaaaaca gaaaggttga tttctttcca acgccctgta aaggctttca
     6061 ttacgcagta gctgataaag ccgaatgcaa tcccttcagt gatggagtaa gtaaacggca
     6121 tcattgcggt agtaataaat gccggcgtag cttcagttaa atcgtcccat tttacttcaa
     6181 ttaagctaga tgccattaaa attcctacaa ataccaatgc ccccgcagtt gcataggcag
     6241 gtactaaccc tgcaagtggt gagaagaaaa tggttaatag gaataagatc ccaactacca
     6301 ccgcagttaa gccggtacga ccgccaactg aaacgccgga gccactttca atataggtag
     6361 aaatcgctga agttcccata taagagcctg ccattgcagc ggtactatct actagcagag
     6421 cttgtttcat tttcgggaaa cgcccttgtt catccgcaaa gcctgctttg gtagtcaccg
     6481 caattaaggt gccggaagag tcaaacaggt ttaccaacat aaaggagaaa atcatcccga
     6541 gtaaggcaac atcaaaagca ccggcaatat caacctgccc cacaactgcc ccaaggcttg
     6601 gtggcataga cattatgccg ttaaagctca ccgccgggtc aaaggctaag gcaagagcgg
     6661 taacaatcac aattgaaatt aacacgcctg agtgaatacc tttcgccgct aatacaacaa
     6721 tgatgaaaaa gcctaaaatc cccattaaca ctttcgggtc gtgcaaatca cctagtgcca
     6781 caagcgttgc cggatttggc accaccaagc ccatattttt aaaaccgatt agggcaatga
     6841 ataaaccgat accggcacca atacctacac gtaaaccaag tggaatcgca gacataaacc
     6901 agtaacgaac ttgtaataca gttaatagga ataagccgac agagcctaag aaaatcgccc
     6961 ccatacccac ttgccacgag taacctaatt tttgcaccac tacgaatgca aaaaaggcat
     7021 ttaagcccat tgccggtgca agagcaatcg gtaaattact gaataacccc attgcgatag
     7081 taccaaaagc ggcaattaaa caagtagtca cgaacactac ttgggtgtcc attcccgcca
     7141 cgcctaaaat agacggattg acgaaaacaa tataaaccat tgtgaaaaag gtagtaatac
     7201 cggcgataat ttcggttttt acattactgc cttttgcttt gagctgaaat aatttttcta
     7261 acataagacc ttcggtgttt aaacaaaatg acaacgccca agcaatcggt tgctcgggcg
     7321 ttgacgattt ttatcacgga ataaatactt ttgcaagcac ttaatacgct aaaactaatt
     7381 ttagtaattt caccgctaaa aatgccagac tgaaacgctg ttcatcggcg accgtccaga
     7441 actgcacttc ctgttcggat ttcgccaata actgactgat ttctaacgca ttttgctctt
     7501 cgttttcgcc atttttcacc gctgtaatca ctgaattttc attaaaattc agccaatttt
     7561 cggctttcca agcttcactt aacgcattag catctaactg atattcagac tgcaccgaca
     7621 ccatttggga aaccccataa aagaccggca cttgcacgct gtggaaggta gtacaagcgg
     7681 tcaaatttgg taaaactttt gcaatttgca gttcaaaggc ttttgagaac ggcagacttt
     7741 tctcttctcc ttgcacatta gccggcacaa catcaaaggc aatgcgttcc gcattttcat
     7801 caaacggaat gccgtttaac aaacgggcag tttgtccggc aagctccttg actttttcat
     7861 cgccaaaata ggcagacggt aaaagtgagg ttacccacac ctgttttaac ggctcgttca
     7921 acaatggctt taaggctaac gccagttgtg aaatttgcgg attggctaaa gcaacgatat
     7981 ttcgctcacg caaatttgcg acattttcat catttacact tggcacaact accggtacat
     8041 cgccgatgag tgcggtaatg ccgtataaat ctaaaatcac acagccggct ttcaccgctt
     8101 ctgccaacac ttccgcttgt gccattttgc cggcaaatag aacatggcta aattccgccc
     8161 aatttacttc atctaacgca tattgtgcga ctgcttttgc cccaaagcgt aaattctgct
     8221 cttcaccaaa cggctcaagc tcaacggctg aaatattttc aatccctaaa tcttgatttg
     8281 ctaatgcttc aagtaatttt tctgccagcg taaaatcagc ggcaatcgct aaatggatat
     8341 tcgacacact atctcctttt tcataacgtt attcggtttc attataagct aatttcacgc
     8401 ttcagaaaaa tcataactca taatgtgtaa tttatggttt ttgcaaattt taaacctaaa
     8461 aacaccgctt gttttgcctg taatttactt ttcaaatgat tgaacttttg atatagttca
     8521 cactttaaaa gtagcttatc attctcatta aaactgagga ttagctaaag cccaatagta
     8581 aaacaaaatg gcaaaacaag attcagattg tataacctta gatctgtttg cgactgtacc
     8641 aaaagttggg cgtcctcgta caaatcctct tgatagagaa caacaacttc gaatcaataa
     8701 acgtaaccaa ctaaaacgag ataaatcttc cggtttaaaa cgggtagaat taaaactgca
     8761 ttcgaattta gtaaagttat tagaggaaca ggcgtctgaa caaggtgttt cacgcgggca
     8821 gttaattgaa acaattctaa ataattatct cacaaatagg tagtagcaat ggcagttgta
     8881 ggtttatttt acggtagcga tacaggcaat acagaaaata tttcaaaaat gattcagaaa
     8941 aaattagggg ctgaattaat tgatattcga gacattgcca aaagcacaaa agaagatatt
     9001 gaagcatacg attttctgat gtttgggatc ccaacttggt attatggtga atcgcaagcc
     9061 gattgggacg attttatgcc taccctaaaa gagattgatt ttaacggcaa agtcgttgca
     9121 atttttggtt gcggtgatca ggaagattat gcagaatatt tctgtgatgc aatgggtact
     9181 gtgcgtgatg tggtagagcc aaatggtggt gtgattgttg gtcattggcc aactgccggt
     9241 tacactttcg aggtttctca ggccttagtt gatgatgata cttttgtcgg cttatgtatt
     9301 gatgaagatc gtcagcctga attaaccact gaacgtgtta ataaatggtg cgagcagttg
     9361 aaagaagaaa tgtgcttaga ccaactcgca taataactat tttggataaa gataaataag
     9421 tggcatatat gtctgaagca aatattaaac gtttaaaaga ggtaggctta aaagtaaccg
     9481 agcctcgttt gactatcctt gcattaatgc aagatattcg tgatgaaatg caacattttg
     9541 cagcagaaga tatttataag attctgttag aaaaaggctc agacattggt ttagcaacgg
     9601 tttatcgtgt cttaaaccaa tttgaagaag ccggcatttt aacccgccat aatttcgatg
     9661 cgaataaagc agtattcgaa ttaaatatga accacgaaca cgaccatatt atttgtatgg
     9721 attgtggtaa ggtgttcgaa tttaaagatc ctgatatgga gcgtcgccaa cgtgaaatca
     9781 gtgaaaaaca cggaatggaa ttgactaacc acagtttata tctgtatggt aaatgcagta
     9841 atttaaccaa ctgtgatgag aaaaaataat atttcttatt ttgacttatt tctattaccg
     9901 aagtcccttt gggtcttcgg tattgttcta tataggtttc cctaatttaa aatgacgatg
     9961 gaagaaaata cccacactgt tgtagatgcc caaatccggc agcctcgcaa aatttctcct
    10021 ttttggctgt taccaatagt tgcttttatt attggtgctt tgctattttt ccaaatttta
    10081 aaagagcaag gtgaaacaat cacgattcga tttagtaaag gtgatggcat tactgccgga
    10141 aaaaccgcta ttcgttacca aggcttgcag attggtcagg ttaagcgtgt ttattttgtc
    10201 gataatttaa aagaagtgga agtgcaagca gaaataaacc ctgaagccaa aagtatttta
    10261 cgcaaacaga ctaaattttg gttagtgcaa ccaagtgctt ctttggctgg cgtttcaggc
    10321 ttagatgcga ttgtttctgg taactatatt accctacttc ccggtgaagg cgatttcgtt
    10381 gatgaattta ttgcagaaga agatcctccg gctattaccg tgagcgatgg cgatttactg
    10441 atccgtttaa tctctgatga cataggctct attactgtcg gagcgagtgt ttatttccgt
    10501 aaagtgccag tgggtaatat tgccgattat cgttttacca aagaccagaa aaaaatcgaa
    10561 attgatgtcg tcattaatca aaaatacgct catttagtaa aaaaagagag ccgattttgg
    10621 aatattagcg gtattagcgc tgatgtaaat ttacaaggta ttaaaatcaa tatggacagc
    10681 cttgcctcgg tagtacaagg tgcggttgct tttgattcgc ctgataatat ggaaattgcc
    10741 gagcaaggac agaaatttga gctatatccg gatttgaaat cagctaaacg tggaattgaa
    10801 atcaacgtaa aactaccgct tacacataat ttaaaaatta atgagactgg tgtttttcac
    10861 caaaatgtgc aaattggtat gctttcgcag ctaaaattac cgcaagtaaa agacaacggt
    10921 gtgccacagc aagaatcagg gcagcataaa cagattgatg gggttttatt aattgaccca
    10981 agttatgaaa atttactacg ttcccaaact aaaatcttgc tcaaagagcc gaaattctcc
    11041 ttaaacacag agcagctgac gaaagtaggt gagctgctgc gtggtgtcta ttttgaggtt
    11101 cacccggggg aaggagaacc tcaatcggaa tttgtggtac aaaacgaagc cgattatcta
    11161 ttaagtttac cgaatttact tagctttagc ttaattgctc ctcaagccta tggggtagat
    11221 accaatcagg ggatttacta tagcgatgtg caaatcggag aaatcgtcaa acgtagccta
    11281 gagttagaca aagtacgttt tgatgtcatt atttatccgc cttatcgcaa cctgattggg
    11341 agtaacagca aatttgttgc gatatccaac attgatatgt cggtggggct agatgggtta
    11401 agagttcacg ccggttcacc atctgaatgg ttaaaaggcg gtgttcgctt aattaacggt
    11461 aaaaatgacg gtagcccgaa aaaacaatat gcactttata aagatataga aagtgcggaa
    11521 tcaggcatgg ctaccttaga taaaaaagcc accactaccc tttcggcaga ttcattatct
    11581 ggtatcagcg aaggctcttt ggtgctatat cgtgattttc aggtcggcga ggtgttaaaa
    11641 ataaccccga aacaacaaaa atttgaggtt gagctattta tccagccaaa ttatcgtcat
    11701 ctattaaccg agaaaagccg tttctggatt gagccggcaa cgagtgttga tgtgtcactc
    11761 aaaggcgtga atatcactac agctccatta atgcgtacct taaaaggggc gatcagcttt
    11821 gatgatggcg gttcaaaagg caataaaacg ctttatgcaa gtaaggagaa agccacttcg
    11881 ggcaatactt atctcacgct gattgcaaaa gatgcgagta agttaagcga aggaatggac
    11941 attaaatata tgggcttaac cgtaggtcaa attgaaaaac ttgagctaca aaatgcaaaa
    12001 aaacagataa aagcgaccgc ttacattcaa aggaaatact atccgttaat tgcaaaagcc
    12061 ggcagtaaat ttaatgttat ctcgcctgaa atcagtacct ccggctttaa aaatttagat
    12121 gcagcactac aaaattacat tacggttgat gtcggttcag ggcaagctca aaaccaattt
    12181 gttcttgcag ataccgatac ggtaaaaacc acctatgcca acggtttccc cattattgtc
    12241 gaaaccacca atgctaacgg tattcagccg gaagcaccgg tgctttaccg tggaatgcag
    12301 gtgggaatag tcagccgttt agggctaagt gagttaggcg atcgagtgct tatttatgtc
    12361 aatattcaag ataaatacaa gcacttagtc agaaccaata cccaattctg gcaagcttca
    12421 ggttacacta tggacgtgag cctgcaaggt gtaagtatga actccggcac aatgtcgcag
    12481 ttattaaatg gcggtattga gttctctacc ccttacacta aagtggtgaa gcctcaagcc
    12541 cagccaaaca gacgattttt cttacagcgc aaactacctg atgaagcccc ggcttgggat
    12601 caaggaattg cggaataata ttgatggagt aaaaaatgcc tttattagat agttttaaag
    12661 tagatcacac caaaatgaac gcaccagccg tgcgtgttgc aaaaacaatg accacaccga
    12721 aaggcgatac cattaccgtg ttcgatctcc gtttctgtcg tccgaatatt gatattctac
    12781 cggtgcgtgg gattcacacg atggaacatc tttttgccgg ttttatgcgt gatcacctca
    12841 atagcgaaca agtggagatc attgatattt caccaatggg ttgtcgtacc ggtttttata
    12901 tgtcactgat tggatcgcct tcagcagaag aagttgtcaa agcttggacg gcatcaatgg
    12961 aagatgcgtt acataaaatt cctgatgtat cggcaatccc tgagctgaat gaatatcaat
    13021 gtggctctta caaagagcat tctttaaaag aagcacatca aattgcccgc aacgtattag
    13081 ctgccggcat tggtataaat cgcaacgaag atttagcctt agacgaaaaa ttacttaatc
    13141 cataattttt tcacattttt tcgggggcaa atggctattt gcccctgcat ttttattcgg
    13201 aaatcacaaa tttatgtttg aaaaactgtt taaatggttt gaggcaaggg tggaaaccta
    13261 tccaaatgaa atgccgaaaa ctccaaaatc aggtctcatt ccttttattt acgatgccac
    13321 taaaggaatg cggttttata tcttactact gaccgtatta gttgcagctg tcggtattat
    13381 cgaagcggtt ctgtttcgct ttatgggcga tttagtcgat tgggtcaata aatactcgcc
    13441 aacagaactt tgggcagaaa aaggctggac gattatcggt atgtttttta ttgccctact
    13501 tgcagtggtg tttgtttacc ttgccagcag cattcgcttt caatctctgc aaggggtatt
    13561 tccaatgcgt ttgcgttgga acttccaccg cttaatgctt gggcaaagtt taggtttcta
    13621 tcaagacgaa tttgcaggaa gagtgtctgc aaaagtaatg caaaccgccc tttccgtgcg
    13681 tgatgtgatt atgacttgtg ccgatatgtt ggtgtatgtg ctggtttact tcaccacctc
    13741 cagcgtgatt ttattacaac ttgacggctg gttattcgtg ccgtttattt tatgggtcat
    13801 ctcattagcg gcaaccatta tctactttgt cccgaaatta gcccaagctg ctcaagagca
    13861 atcggatgcc agaagtttaa tgaccggtcg aattaccgat gcttacgcta acattgccac
    13921 cgtcaaactc ttctcgcacg gcaaccgtga atctgcctat gcgaaagagt cgatggaagg
    13981 atttatggtg acagtgcata aacagatgcg tttagtgact gtaattgaaa ccgtaactaa
    14041 tctaacctcg atggcattaa taatttcaac tgcgggtatc ggtttatggc tttggggttc
    14101 aagcgtagta actgcagggg cgattgccac ctcaaccgct ttggctttac gcattaaagg
    14161 cttatcacaa tggattatgt gggaatttgc tcgtctattt gaaaatttag gtacggtaca
    14221 agacggtatg attacgcttt ccaaaccaca caatgtggta gataaaatcg atgcgaaacc
    14281 gttaaatgta accaaaggcg aaattaaatt tgagaatgtg gattttgcct acgatccgaa
    14341 aaaaccgcta ctgaaagatt ttgacctcac tataaaaccg ggggaaaaag tcggcttagt
    14401 cgggcgtagt ggtgcaggta aatcaacgct caccaattta ttattgcgtt tttacgatat
    14461 tcaagacggt tcaatcacga ttgacgggca aaatatccgt gatattaccc aagaaagcct
    14521 tcgctcacaa attggtttag taactcaaga cacctcgctg ttacaccgct ctgtgcgtga
    14581 aaacttgatg tacggtcgcc caaacgccac tgaagaagag atgatcaaag ccgttgaaca
    14641 agctgccgcc agtgaattta ttccaaacct gcaagatgcc aaaggcagaa ccggttttga
    14701 tgcacacgtt ggcgaacgag gggtaaaact ttccggcgga caacgccaac ggattgcgat
    14761 tgcccgagtg atgctaaaag acgctccgat tttattactc gatgaggcaa ccagtgcgtt
    14821 agactctgaa gtagaagtgg caattcaaga aaatctcacg caattaatgg aaggtaaaac
    14881 cgtggttgcg attgcccacc gcctctctac cattatggca atggacagac ttatcgtgtt
    14941 agataaaggc gaaatcgttg aacaaggcac gcacgaagaa ttgcttgctc aaaacggtgt
    15001 ttacgccaga ctttgggctc accaaagcgg tgggttcttg ccggagaata cggatattta
    15061 atcaactcca tcacacatca tactaagcaa gcggtcattt tttgttagca atttgcaaga
    15121 tttcaacaaa aaacgaccgc ttgttcgcca attaaaatcg cttccaagcc cccataaaat
    15181 ctctcaaaaa tttgcaagat ttctcccctt ttttcaggta tcattatgac ctttaataac
    15241 aataattttg gagcaaattg tgtcttccct ttggtctgat tgccttaatc acttacaaac
    15301 gaaagtctca ccaactgatt acagcacttg gctgcgtcct ctgcaagcga gttctgagaa
    15361 tggggaactt acactttatg cacaaaatca atttgttgaa aactgggtaa aagataaatt
    15421 tttatcggaa attaccgagc ttgcccgttt tttggcgaaa aatgataatt tggtggttac
    15481 gttaaaagtt gggattaaac cgacagaaca gccaaaggtc agcccaaatc taaaaaacga
    15541 gagttcagaa ttcagcaata ccggctttaa aaccgggcta aatccaaatc aaacctttga
    15601 taattttgta caaggtcgct caaaccaatt agctaaatta gtggctcaac aagtggtgga
    15661 taatttaggc gaaagccatt gcaacccact ctcgttttat gccggcaccg gtttgggcaa
    15721 aacccactta ttacacgcta tcggcaatga attagttaaa cgcacaccgg gtactcgggt
    15781 gctatatatt catttggaac gtttttatcg tgatattatt aaggcgatca acagttccaa
    15841 taacgatgcg gaaaaaatca aaaaattcta ccgctcgctt gatgtgttaa tgattgacga
    15901 tattcaattt cttgccaata aaccgaaagt acaagaagag tttttacatc tactcaatgc
    15961 tttatttgag cagagaaagc agattattct aacctctgac gttttgccaa aaaatatcga
    16021 taaaattgac acagcgatta aatcccgttt aagcggcggt attagtgcga ccattgagcc
    16081 acctgaattg gaaacccgag tggcaattct tcgccaaaaa gccttagaac gtggagcaga
    16141 tttgcaagaa gatgccgcct atttaatggg gcaaaaactc cgaaccaatg tgcgtgaatt
    16201 ggagggagca ttaaaccgtg tgattgcgtg gcaaaaattg acccttcgcc cgattacggt
    16261 tgatgcggtg cgtgaaacct tgcaagatct gtttgcctct tttgattact tgattacgat
    16321 tgaaaatatt caacgcattg tggccgaata ttacggcata aaagttgccg atattaaatc
    16381 gaaaagtcgg gcaagaagca ttgcccgtcc tcgccaaatg gcaatggcac tggcaaaaga
    16441 gctaaccaac cacagcttgc cggaaattgg tcgggaattt ggcggtcggg atcatactac
    16501 cgtgatgcac gcctgcaaaa ccattaatga attacgcgat accgaaagcg gtatccaaga
    16561 agattatatc catttaacac gcaaattatc atcttagccc gatgaaggaa tgattatgca
    16621 aattaccatt accagagaac aattacttaa gcctttacaa caggtgtgtg gcgtattaag
    16681 tagccgtccg actttgcctg ttattaacaa tcttttatta gaaattgaag gtaatcgtct
    16741 atctttaacc ggtaccgatt tagaagtgga attaaccacc caagcacaac tgctacaagc
    16801 ggtcgatttt gccggaaaat ttaccattcc agctaaaaaa ttcctagata tcagtaaaag
    16861 cctacctgat gacagcgtga tttcggtaca atttgaagaa gataaagcca ttatcaaagc
    16921 aggacgtagt aaatttagtt tagctacatt accggcaagt gattacccga atttgatgga
    16981 ttggaaaccg gaagtggatt tctcgattga tcaatctacc cttgcccgtc tgattgatgc
    17041 cacccaattc tcaatggcaa accaagacgc ccgttatttc ttaaacggaa tgaaatttga
    17101 aaccgaaggc aatttattac gcaccgttgc cacagatggg caccgtttag cggtttgcac
    17161 aatggtgcta aatcaagagc ttttgactca ttcggttatc gtgccacgca aagccgtact
    17221 tgagctttcc cgcttggttg ccagcaacga tgaaaccgtg cgtttggaaa tcggttcaag
    17281 caatatccgt attacaatga acggcattgt atttacctct aaactgattg atggcagatt
    17341 cccggattac cgccgagttc tgcctcgcaa tgcagatcgc attctagaag cggaaaccga
    17401 aacccttaaa cgggcattaa tgcgtgcagc gattctttct aatgagaaat ttagaggggt
    17461 gcgtttaacc ttaagcaata atttactcaa aattaccgca aacaatccgg agcaagaaga
    17521 ggcggaagag atcattgatg ttgcctacga cagcccggaa atggaagtcg gctttaacgt
    17581 tagctatgta ttagatgtgt taaacacctt aaaatgccaa cgtgtgcgtt ttagcttagt
    17641 tgattcaagt tctagttgct taattgaaga ttgcgacaac agctctgccg aatatgtgat
    17701 tatgccaatg cgtttataat tcacagcaac actaaaccaa caaaaaagcc tgattgattt
    17761 tatttcaatc aggctttgtt tttataagtt attcaaacgt acatcaatta aggtttgttc
    17821 ctgaggattt gcggtcgttt tagcttgctc ataagcactt ttcgccgcag gaatatcgcc
    17881 ttttgctgca agaatatcgc ctgttagaat ttgcttacgc aattcccacg ctttatcttg
    17941 aatttgagcc agacttgcca gtgcttcatc gtaagatttt agttggaagt caatttgagc
    18001 caaacgaaaa cgagcgatag attgtaaggt tgaatccgaa taagtcaaaa ctgactgtaa
    18061 cgctgttttt gccgcagaaa aattcccttt ttcgaccgct tgtttagcta cttcaaattg
    18121 ggcaaaagcg gcatagcttg aatctttatt atcggcaata aatttctcaa caagcggttg
    18181 atttttgctt ggattttgca aataactctc catcacgctt tggtatgaag cggatgtttt
    18241 ttgtgccgtt tcaagctggt gatttttcca aaaattccag ccggcagttg ccgcacaagc
    18301 taaaataatc gccaccaaaa tcggtgtccc gttctcttta aaccaatttt tggcatcttc
    18361 aaattgctgc tcttcggttt tatttaaata ttcgttactc atctttttct cctaaaatcg
    18421 tttagatagc tcagcaatca gctctgattg agcaatcgtg atttgttctg ctcctgaacg
    18481 taaatctttg ataacaactt gcttttcagc cacttcgctt tcgccaatca ctaacgcaat
    18541 ttgcgcttct actttatctg cacgcttaaa ttgtttttgg aatttaccgc cggaacagtg
    18601 tgtcattacg ccaacgtgtg gcaattcgct acgaatctgc tctgcaagtt ggaaggcatt
    18661 tagtgttgcc ccttcaccgg agaatacgat atacacatcc accgtttttg gtaaatcaat
    18721 ctctttattc acctcttgta ccaacagcac taaacgctct aagcccattg caaagccaac
    18781 gccttgggtt gcgtgtccac cgagttgttc gactaagccg tcataacgcc caccgccaca
    18841 tacggtgcct tgtgagccta aggctgaagt gacccattca aacacggttt tattgtaata
    18901 gtctaaacca cgcaccaatt ttggattgac ttcgtaacgg attcccattg catcaagtaa
    18961 ggcacaaagt tgggtaaaat gttcacggct gtcatcatct aaataatcga gcagttttgg
    19021 ggcatcgttt aatacatttt gtagtgcttc gtttttggta tctaaaatcc gtagcgggtt
    19081 tttcaccaaa cgctctttct cttcttcgtt cattaaagcg gtgtgatttt ctaaaaattt
    19141 tactaatgct gagcgataat ttgcacgagc ttctaacgag ccgatagagt taagttgcaa
    19201 agaaacatgt tgatcgatgc ctaactcttt ccataggcgt gcggtgagaa taatcaactc
    19261 cgcatcaatt tccggatttg caatgccaaa cacttcaaca ccggcttggt ggaattggcg
    19321 gtaacgccct ttctgtggac gttcgtggcg gaacatcggc cccatatacc ataagcgttg
    19381 ctcattattg tagatccaac cacgctcaat cgctgcacgc acacaaccgg ctgtaccttc
    19441 cgggcggagc gttaattgct catcgttatc ccagaacgtg tacatctctt tcgacaccac
    19501 atcggttact tcgccaatgg cacgggcaaa taacggagtg ctttctacaa tcggcatacg
    19561 tacttccgaa tagccgtaac ttgccagcac attacgcact ttctgttcaa cccattgcca
    19621 taatggagac tcacttggtg agcagtcgtt cattcctcga attgcttgaa ttgtttttgc
    19681 cactatattt atcctatttg ttcaatatct atacgattat gttgttgtgc aactctggca
    19741 cgaattttag cttctaattg gtcgattaat tttgcgttgt caaaacgctc tttttgacga
    19801 acgccatcta aataaaagcc gctcatttta ttgctgccgg ttacccctaa atcagacacc
    19861 aacgcctctc ctggaccgtt taccacacag ccgataatcg aaacgtccat cggcgtgata
    19921 atgtcttcta aacgttgttc tagctcgttt accgtcgcaa tcacatcaat ttcttggcgg
    19981 gagcaggttg ggcaagcaat aaagttgatc ccacgagagc gaatacgcag cgatttcaaa
    20041 atatcaaaac cgactttcac ctcttcaaca ggatcagccg ctaatgacac acgcaaggta
    20101 tcaccaatcc cttccgctag caacagacct aagcctaccg ccgatttcac cgaaccggct
    20161 ctcgctccgc ctgcttcagt aatacctaaa tgcaggggct gatcaatctg ttttgcaaga
    20221 agtcggtaag attcaaccgc tagaaataca tctgaggctt tcacgctgac tttgaattga
    20281 tcaaagttaa ggcgatctaa gtgatcaacg tggcgtaatg ccgattctaa taatgcctgt
    20341 ggtgtcggct cgccatattt ttcctgcaaa tcacgctcta atgatccggc atttaccccg
    20401 attcggatcg gaatgttttt atctctggca caatctacca ccgtgcggat ccgctcttca
    20461 ttcccgatat tacccgggtt aatccgcaag caatccaccc catattcggc aactttcaac
    20521 gcaatgcggt aatcgaagtg gatatccgcc accaatggca cactcacttg ttgtttaatc
    20581 gctttaaatg cctcagcagc gtccattgtc ggcacagaca cacgcacaat atcagccccg
    20641 acccgttcca gcgatttaat ttgagcaacg gtggcttcca catcggttgt gcgggtgttg
    20701 gtcattgact gaaccgtaat cggtgcatcg ccgcctacag gcacattacc cacatagatt
    20761 ttcttcgata cccgacgttt aataggtgat tgatgtatca tatttttagc taattgtgaa
    20821 aatttataaa aacagaaaac gctcgtaaag acagctatcg ttaaatgcta gctttacgtg
    20881 cgtttcatcg ttaaatcaag cttactgtaa cggtaaatga atacgagcta cacgcccatc
    20941 aattttcaat ggtacttctt gacctttata gtacactttt acattggcag gcgcaccaat
    21001 ggttaaacga tattgctcat tctcattgaa acttaaagtc tcaccattgt tatataattt
    21061 ttctgctaaa cgtttatttt tagcaccccg cactgtaatc cagctttgtg aaccggtaat
    21121 ttcgatacga agctcatcat tcgttaccgc aacaggctgt tctgtagggg cttgttccga
    21181 ttgagattgc tgtaaaacat taactgcctc aacctgtgca gtggtggcat cagcttgttt
    21241 aacttcttct accactttaa catcttcttg tgttacaggt gatgatgctg cttgtgtagg
    21301 ctctactttt tcagttaatg ccggttctgc tgcaactacc gtttctgcta cttgagcagg
    21361 ctgctctgaa acctgaatag gttgctgaac aggcacggaa gtttgtgctg aagcatcatt
    21421 atttgtagcg gtattcgcca cttcagcaac tggtgcagag ctaacaaatt gctcgcgatt
    21481 ttcctgttct ttttgatacc cttgccacca ccaaagtaat gtcattccta atgccgcaag
    21541 caatactaat accgttaaat actttaaggt tttaccttgt gaatttgatg aaggttttac
    21601 tgaagaaact ttagtgactt cttttggaat agtgacttca ccataattaa cgctcgaaat
    21661 aagggattca ggtaaacgca aaaatttcac ataattacgc acatagccac gcacaaaagt
    21721 tggggcaaca ttttgtagaa taaagatatc attttcaagt gattcaatat gtgatttttt
    21781 taagttggtt ttttgagcaa catctgtaat agagagattt aacgcttcac gagccgcttt
    21841 taattgttgc cctaaagaaa gtgctgtacc agcttgagta gaattaactg attccgtcat
    21901 ataaaactct ttaaagaaag tagtagaaat aaaattcaaa aattattcgg aagtttaaag
    21961 aggtaatgcc tattttgcaa tcttaatgcg taaaaaattg aaaatttaat cggcaagcgg
    22021 tcatattttt caattttttt gcaaaatatg accgcttgta tccggtttta ctttgaagct
    22081 aaattggctt tggctaccgc aatcgcctct gccacacgtt gtgggttcac tccacctttg
    22141 gcacaacgtt tttctaagca agattctaac gagagaattg ggtaaacatc atcgccaatc
    22201 gaatgatgga attgctggaa ttcgttaatg cttaatgctt caagtggctc ttttttgctg
    22261 attgcgtaaa ccaccgcttc gccaacaata tgatgagctt cacggaatgg cacgcctttc
    22321 gccactaaat aatctgccaa ctcggtcgca ttcgcataac cttgctgagc ggcttctcgg
    22381 gtgcgttcgg tattcacttg aatatcaacc agtacaagtt ctgcaatttc taaacaagcc
    22441 tgccaagttt ccaacgcatc aaaaataccc tctttgtcct cttgcatatc tttattataa
    22501 gcaagtggta accctttgag tgtagttaat aaaccgttta atgccccaaa tacccgaccg
    22561 gatttcccac gaatcagctc acaagcatca gggtttttct tctgtggcat aagtgatgag
    22621 cctgaggtca cacgatccga catttcaagg aagcctgatt cgccactatt aaaaatgatt
    22681 aaatcttcag caaagcgaga gaggtgcatc atactgatcg aggcagtaga gagcagctct
    22741 aaaatatggt cacgatctga cacgctgtct aaactgttgc gtgtggcttc ttcaaagcct
    22801 aaatcacggg ctaataagtc acgatcaatg ccgtaagccg taccagccaa tgcccctgaa
    22861 ccaagcgggc aagtgctcat acgtttatta gcatcactca aacggctgaa atcccgttct
    22921 agcatttcat aatacgccat acaccaatga gcgaaggtca caggctgagc tcgttgtaaa
    22981 tgggtatagc ccggcatcac cgactcttga ttttcttcgg caacggaaac caaacgctct
    23041 tgcaaagctc ggattctttc ttgcaatgcc accgcttgca ccttgcacca cattttaata
    23101 tccaccgcta cttggtcatt acggctacgc ccggtgtgca attttttacc taaatcgccc
    23161 actttttcaa tcagcttaga ttcaacccag ctgtgaatgt cttccgcatc atcttttaag
    23221 atgatggtaa ggttagattc tacctctgct ctcacctctt ttaatgctgc gattagttgt
    23281 tctaattctg ctaccgttaa aatacctacc gaagtaatgg cttttgccca gccgattgag
    23341 ccttcaatat cttgaatcgc caagcggtaa tcaaaacgta atgaatcgtt aaaatattta
    23401 aattttgcgt ctgcttgttg tgtaaagcgt ccaccccaaa gtgccacagt ctgttccttg
    23461 tatattattc tttgtatcga tcaaaatgaa aaaggcgttt taccgcctta acttttcgct
    23521 tattttgcat aaatatgcaa aatatttcaa tatttattta taactatttt aattgtgact
    23581 caataatgcc accgcctaag caaacttcac ctaagtaaaa cacggcagac tgccccggcg
    23641 tcacggcaat ttgcggttca tcaaacatca ctcgaatggt ttcatcatca atcacttgga
    23701 tttcacacgc aatatctgct tgacgataac gggtttttac cgtgcagcgt aaattttcac
    23761 gcaacggctg catatccacc caagtgagct gtttcgcaat taagccactt gaaagcaggg
    23821 ctgaattatc gtgtccttgt gccacaatca atacattgtt aattaagtct ttctccacca
    23881 cataaaacgg atcttcactt agccctttca ccccaccgat acccaagcct ttgcgttgcc
    23941 caagcgtgtg atacatcagc ccatcatgac gaccgactaa tttgccctca acggtgcgga
    24001 tttcccccgg ttgagccggt agaaaacgag ctaagaaatc tttaaattta cgctcaccga
    24061 taaaacaaat gccggtagaa tcttttttct ttgcggttgc taatcctagg tcttcggcaa
    24121 tggctcgcac aatcggcttc tcaatttcac ccactgggaa taaactctgc ccgatctgct
    24181 ttttatttaa cgcatataaa aagtaactct gatctttgtt ttcatctaag ccacgcaaaa
    24241 gtttcgcatc ttgatcatcg ctcgtacggc ggacgtaatg cccggtcgca atataatccg
    24301 caccaagatc ttctgccgca tattccaaaa aggctttaaa tttgatctct ttattacaca
    24361 aaatatccgg atttggcgtt cttcctgcct tgtattctgc caagaaatat tcaaatacat
    24421 tatcccaata ttccgctgca aaattaattt tatgcagttt catacccagt ttatcggcaa
    24481 ccgcttgagc atcggcaagc tcggcggcgg cggtacaata atccgtatca tcatcttctt
    24541 cccagttttt cataaacaag ccttccactt ggtagccctg ctgttgaaga ataaaagcgg
    24601 aaaccgagga atccacccca ccggacatac cgataatgac ttttttcttg ctgttttcag
    24661 caagttgttc tggggttaat ttagggaaat gagtgtcgta ggtttttgag gttaattgag
    24721 ttgtcataaa tctcccgtaa cttcggttaa ggcgaagcac attggttaat aataaaaaca
    24781 acaagcggtg aaatttgcaa aaaattttgc aaaatgaacc gcttgcctat taagaaatta
    24841 gagttctctt tggtaaaaga cttttcctac tctatcaata tgttcaataa agttggcatt
    24901 ggttaattga tgataaatcg acaagtcaaa taaatagggc gagtcggaat cgtctaaatc
    24961 accccaaatg cgtttgacaa tatcgtaagt aagatctttt cctttaaaag taagatctac
    25021 atctgagcct tcacgataat tacctttagc acgcgagccg taaataatgg cttgctccac
    25081 ttcagggtat ttcgcaagaa tatcggtaat agttttcgtc gctcgttcgc ttagtccaaa
    25141 gtttggcata gtgtttctac tcgctgttca aattcaataa ataaaggcag atacgccttg
    25201 ataattttat taaattcttc agttaaaata gtttcatcgt cagtatgaac tgttatattg
    25261 cggcttttta tcatttctag ccaaacttcg ccctgagtga ttagcccacg attaaaagcc
    25321 aaacgagaag ccgtttttga accataaata tcaacttcac cttcccattt taaaatatct
    25381 tgcattaact tccacgctaa ctcgtgtgta atctcaaaac tctggataat tcctttttta
    25441 attacatcaa tgtcggtatc agcgtatttt tctgcttctg cttgaaggta acttactgat
    25501 tttttatagt tatcaaaccg ctgtttccag cgaatatctc tattcatatt atttcacttc
    25561 ataaaattgt ggctctttat taaaacgtgc cacttcttca gggtcggctg tgccgtctgc
    25621 gattttagat tttaggttat cgcaaggttc ttcgcagtcg cacatttttt tcatacctaa
    25681 agcggtgata ccgccacagc tgcctttgat ggttttgcct ttcacgataa aaccaatcga
    25741 catcgcaaaa attacggcta caaaaaagcc aaaggttaat aatacagttt ccatttttca
    25801 ctccaactat tgtgattgaa taagtttgct aaattcgctc gacatttgtg tctcaaattt
    25861 atcgccgttt ttaacaatta aaaaaatagc taatttttca cgctctgcca ctgctaatgc
    25921 tttttccgct cctaaaacaa ataaaccggt tgataagccg tctgccgtca ttgtagttgg
    25981 ggcaaatacg gtgatagagg ctaaattatg gtttaccgga cgtaactgtt ttgggtcgat
    26041 aatatgtgaa agacggttgc ctttttcatc ttcaaaataa ttacgataat tgcccgaagt
    26101 tgccatcgcc aaattgtgca acggcacggt aatttgtgcg gcttgacctt gtgtcattac
    26161 cggcttctcg attgcaatcc gccaatctaa gccttgtaaa ttttttcctt tgcctcgtaa
    26221 ttcgccacca atttcaacta aatagttgct cacacctata gtttcaagat gctcggctaa
    26281 tttatctaca ccgaaaccct ttgcaataga cgataaatct agataaagat tagctgctga
    26341 cttggtgagc ttgggtttac tactcatttc aagcaaaatt ttatcaatgc cgacataagc
    26401 agaacgctct gcaatttgtt catcagacgg cactttattt aagcgtttat ccggcccgaa
    26461 gccccacaag ttcaccaatg gaccaacggt tacatctaaa gccccttcgg ttactttatt
    26521 taaacggatt gcctcttgta ccacttttgc aaaatcctgc gaaatttcga ccgcttgatt
    26581 tgcctgcttt gcttgattaa aacggctaat ttccgaatct tgttggtagg tggacatctg
    26641 attattcacc tcaatcaata agccatccag ctcatttttc attttttcag gcgaaatcaa
    26701 attctccact tcaccattat caatatattt tacggtgtaa gtcgttccca tggttttgcc
    26761 tgacagcgta atttgctcag gggctttttc acaagcactt aaagtaaaaa aagcaattaa
    26821 aagaagaaaa aattttttca ttggtgtcac aaaagttaaa aattggggaa attatagcat
    26881 atttagcgat taaataagca cttcatatcg ctgtaaaata atttgtttaa acgattcgtt
    26941 gcaacttgcc cagtcaatca gatctactgt gaaaggtagg tcagaatccg taaacgcaag
    27001 ctctaactct gtttgttgcc gaattgtgag cggttgtttg gtgattaatg ctaaatcaag
    27061 atccgaatag gctttggctg tgcctttaat gcgagagcca aaaacccaaa cgggtgtatc
    27121 aggcaagtat tttttgaaaa tatccaacac ctgttggcgt tgtgactcag ttaaatcaat
    27181 catagctatt gcgtttttgg agctgtttaa ctaaaaaata cgtactttcc agaaagtttg
    27241 aaattccgtt ataaacctgc tgtgctttat tttgatcata agtatgcgaa gtaatatttc
    27301 gcattttgcg ataatccagc caaacttccg gtgattcaat cagcccatat tgagcagcca
    27361 ttcgcaaaat atcacggaac tcggtgctat caatatcagt gtcatttgac tcaatgtttt
    27421 tgagctgacg cttgagcatt tttatcgaca attcgtaaac aaattcaaat ttttggattg
    27481 ctcctgcaat caaagtgtct tgaataattg cttcttgccg gttaaaccac gcttgattct
    27541 caaggctgac aatcgttttc tcaagggaat tgaaggcatt ttcaagtacc gtaatatcca
    27601 gttgttccat ttgcttcccc ttaaaattca cattattaaa ttaccaaaac ttaataatat
    27661 aaattaaatc aagcggtcaa ttttgcaaat ttgaccgctt gtagtcagaa gttaaggttt
    27721 atcaaccacc aaagtcatct aataagatgt tttcgtcttc tacacctaaa ctcttcagca
    27781 taccgattac cgcagcattc atcaccggtg gaccacacat atagtattcg cagtcttcag
    27841 gtgcttcgtg gtttttgagg tagttctcat aaagcacgtt atgaataaag ccacggaagt
    27901 aatcttctct gtcgcccggt aatggatcag aaagtgccac ataccatttg aagttatcgt
    27961 tttctgcttg aagaccatca aaatcttcca catagaacat ttcacgctca gaacgagcac
    28021 cataccagaa tgacatttta cgtttagatt ttaaacgttt taattggtcg aagatatgtg
    28081 aacgcattgg tgccatacct gcaccaccac cgataaagac catttccgca tcggtatctt
    28141 tagcgaagaa ctcaccgaat ggacctgaaa ttgttacttt atcacccggt tttaatgacc
    28201 aaatgtagga agacatttga cccggcggta cgtccggatt gcgtggtgga ggtgtagcaa
    28261 tacgcacgtt aagcataata atgcctttct cttccggata tgaagccatt gagtatgcac
    28321 gaataatatg ctcgtccact tttgaagtat aacgccataa gtcaaattta tcccagtctt
    28381 cgtggtactc ttttggaata tcgaagtctt tataatgaac ggtatgaggt tcagcttcaa
    28441 tttggatata accacccgca cggaacggta cttcttcgcc ttcaggaatt tgaagtttaa
    28501 gctctttgat gaaggttgct ttgttatcgt ttgagataac ggtacattcc cattttttca
    28561 caccaaagat ctcttccgga agttcaacgt ccattgaaga tttcacgttt acctgacaag
    28621 ctaaacgcca gccttctttc gcttctttct tagaaatgtg cgataactca gttggaagaa
    28681 tttcaccacc gcctgatttc acttgtactt tacattgacc gcaagagcca ccgcccccac
    28741 aagctgacga aacgaaaatc cctttacttg ctaaagcacc gagtaatttt ccaccagccg
    28801 gtagcgtaat gcctttttcc ggatcgttgt tgattgagat ggtaatatca cctgaatcaa
    28861 ctaattttga tttagcgaaa agaatgatca ccgcaagcac taataccaga gccgtaaatg
    28921 cgataatacc gaaaataaaa ttactatcca cgatatgctc cttataattg aatgcctgag
    28981 aatgacataa agcctaacgc cattaagcct accgtaataa aggtaatacc taaaccacgt
    29041 aagcctgccg gcacgtcgga atatttcatt ttctcggtta aacctgcaag ggcaacgatg
    29101 gctaacatcc agcctgtacc tgcacctacg ccataaacca cagattctac aaagttatac
    29161 tcacgttgta ccataaacga tacaccacca aaaatcgcac agtttacggt gataagtggt
    29221 aagaagatac ctaatgcact ataaagtgcc gggaaaaact tgtctaaaat catttccaga
    29281 atttgaacaa gtgccgcaat aaccccgatg aaagtgataa agtttaagaa gcttaaatcc
    29341 acaccttcta ctaatgcacc ctcttttaat acgtgggtat aaactaattg gttagctgga
    29401 actgcaatgc caagtactac aattaccgca atacctaaac caaaagcagt tgaaactttc
    29461 ttagacaccg caaggaatgt acacatacca aggaagaaag aaagtgccat attttcaata
    29521 aatatggact taacaaagat actcagaaga tgttccatct tatttctcca cttgttccgg
    29581 tttccacgtt ctaatcgccc agatcacaaa tccgataata aagaacgcac ttggtgctaa
    29641 taagaataaa ccgtttgctt gataccaacc gccattttga acagtttcaa gaatggtgat
    29701 accgaaaatt ttacctgaac cgataagttc acgtaaaaag gcaacgataa ttaacattgc
    29761 accgtagcct aaaccgttac cgataccatc aacaaaactt tcaaccgggc ctgatttcat
    29821 cgcgaatgct tctgcacgcc ccattacgat acagttggta ataataaggc ctacgaatac
    29881 cgataattgt tttgacagat cgtaagcata agcgcgtaag atttggtcaa ccaaaattac
    29941 taatgatgca ataatcgcca tttgcacaat gatacggata ctatttggaa tatagttacg
    30001 aatcattgaa atgaacatac ttgagaatgc agtaactaaa cttaccgcaa tcgccattac
    30061 tactgctgtt tgtaattgag tcgttaccgc taacgcagaa caaataccta agatctgtaa
    30121 tgcgatcggg ttgttatcga caattggcga taacaataat tttttaagat tgttattgtc
    30181 tgccattagt tagctcctgc cgctgcttta aattttgcta aatatggacc aaaaccattt
    30241 tgaccaaacc agtatttgaa tgaaccatca acaccgttcg aggttaatgt tgcaccagat
    30301 aaaccatcaa caccgtgatc tttatctgca gatacccctt tacccactct taacgcaact
    30361 tggttttgct cgttatacag ttttttacct acaaagtttt tctgccagtt cgggtttgca
    30421 atttcgccac ctaagcctgc cgtttcacct tgttcatagt aagtaatacc gttaacggta
    30481 tttgcatcag gttgtaccgc aacgaaaccg tacataattg accataagcc gttaccgtgc
    30541 attggtaata ctacttgagt cgttttgcca gattcatctt ttactaaata aacttcagca
    30601 tatttagcac gcgttttgat attcgcctta tcatcttcag gtgcgataac tacattttga
    30661 gcaggatctt tagctgctgc acgagcatca aaaccggtta caccctcaac gtaatcacct
    30721 gttgctaaat cgacaatttt cggctcaata aatttggtat aggtttcttg cacattggta
    30781 tctttttgca ataaaccggc cgcttgtaag atgtttttct gtttatcaag ttgtttctga
    30841 atatcttgtg ttggtttaag cattactgcc gcacctgcca caatcaaaga acaaattaaa
    30901 cttaataaaa ctacaacggt tagcgttccg ccaacgctat ctttattaaa tttagccatt
    30961 gtttgctacc ctcgctaatc tgcgtttgat attcccttga actactaaat agtcaaagat
    31021 tggagcaaat aagttagcaa ataagatcgc taacatcata ccttcagggt atgctgggtt
    31081 taccacacgg attaatacac acataaagcc gattaagata ccgtatgccc atttaccttt
    31141 gttggtaaat gcagctgata ccgggtcggt tgccataaag aacataccga tcgcaaaacc
    31201 gcctaatact aaatgccaat gccaaggcat agagaataat gggttggtat cagaaccgat
    31261 tacattaaat aatgtcgcag ttgccgccat accaatcatt acaccggcaa taattcgcca
    31321 agaagcaatt cgggcaaata caatgattgc agcaccaata atcaacatta aggtagaggt
    31381 ctcgccgata gaacccggaa tattacctaa gaacgcatcc atccaagtaa tggtttcacc
    31441 ggttgcaacg tgctgtaatg caccttgacc accaactgcc cattgagaaa gtgcagttgc
    31501 acctgagaag ccgtctgcgg caacccatac tgcatcacct gaaatttgac ccgggtaagc
    31561 aaagaacaag aaagcacgac cggctaacgc agggttcata aagtttttac ccacgccacc
    31621 gaacacttct tttgcgacca caacaccaaa ggtagttgca agggctgctt gccataacgg
    31681 taatgttgga ggaacaatta atgctagtaa gatagaggtt acaaagaaac cttcgttgat
    31741 ctcgtgctta cgcaccattg caaacaccac ttcccagaaa ccgcccactg caaatactgt
    31801 taagtagatt ggtaggaaat aggttgcccc cagcaacatt ttagttcccc agcctgcatc
    31861 agctacagag cctaaactat cggctaagct gtagtgccag ttgttagcaa ctaaatccgt
    31921 taatgttccc attttgagtg ccgctagaat accctgtgca ccaacattgt acattccgta
    31981 gaacatcgca gggaataacg ctaaccatac aattaacatc atacgcttag agtcaatcgc
    32041 atcacgcacg tgagcatctt tacgagtgac cgtacccggt gtatagaaaa tcgtataggc
    32101 agcttcaaat agcgtgtacc atttctcata ctttccacct ttatggaaag cgggttccat
    32161 tttttcaaaa agatttttca aacccatttt taaccgtcct tctcgatctt atctaacgct
    32221 tgacgtaata atggtcccca gttgttttta ccggaacaca caaaagtaca taacgctaaa
    32281 tcttcttcgt ctaactctaa gcagcctaaa gcttgagcgg agtctgtatc tccagctgct
    32341 aaatcacgca ataagagtgt tggaatgata tccaacggca ttacacgctc ataagcccct
    32401 gttggtacca ttgcacgctc actaccgtga actgctgttg tgaagttaaa taatttcttc
    32461 gcaaaatgcc ctaaagtagt acgcgtaatt gaatacttat cagagtaagg agcaatcata
    32521 ccgaagaacg ctttctcacg cccttctaat aaagcagaca cttgtaatgc gtaacgacct
    32581 aaatagtcgt gtactcccgt tgcgatagca ccacttaaca cagaacctga aatgacacgg
    32641 ttttcacccg catttaattc gttggctgtt aattgtgaaa gattcgcccc taaacgagta
    32701 cgcaccaaac gtggattttt cacttgtggc ccggctaatg cgactacacg gtcagtaaat
    32761 agctcaccgg tcgtaaataa tttaccgata gcaattacat cttggtaatt taaataccaa
    32821 acttgtttag ttgcacctac cgggtcaata aagtgaatat gcgtaccaga aagacctgca
    32881 gggtgcggac ctttaaagcg gttagtttcc acattattga tctgacggct ttgtgccgca
    32941 tttaaaatat ttgagtctgc actgccacag agatgaatca cttttttact ttcaaataaa
    33001 cgacttaata cagttaagcc atcaaagaaa gcttgttggt gttctgcaat aatcacttcc
    33061 ggatttgctg caagtggatt ggtatccatc gcattgacaa aaatagagga aggttctgca
    33121 tctaatgcag gcactttgct aaacggacgt gtacggaaag ccgtccataa gcctgactct
    33181 acaaggtttt gttttacttg ctctgaagtt aatgaagcta attggctggc ttcataacga
    33241 gcaaaggtaa tttgctcatc accctcaact ttaattacta ccgattgaag aacacgcttc
    33301 tcgccacggt taattgccgt tacggtacca cttgcagggg cagtaaatac cacgcccgga
    33361 ttctttttat cttcaaaaag aacctgacct ttctttacta catcgccttc acgcactttc
    33421 attgaaggac gcatacccac atattcttca ccaagcatag caacttcagt aacggtatta
    33481 ccgttatgga ttacttgctc aggttttccc gcaatcggaa gatctaagcc ttttttgatt
    33541 gtaatcatat tgtttgcact acttttcttt tgggttaaaa aatatgattg cgctaacgca
    33601 atcgcttcta ttgagccgca gctttactta aaaataaaca atggtccccc acctattttt
    33661 aaaagccaca ttaagttctc aaatctgtga tcaaccttta tcttttctta acaaaaggtt
    33721 aactaaaaat aatcttctta ttttacctaa aaagctcccc ttctggctag gaaaaccccc
    33781 tattttttgc atattcccgc ggtaaaattt gaaataaatc aagatttcaa ttccctctta
    33841 acataaatta accataatta gttaatccaa tttcccttca agcggttaaa ttttattaac
    33901 aatttgcaaa aattttttta gctaggcaat tttgaaattc aggcgtaaaa tagttgataa
    33961 attttgtaaa atattaaaaa acaggataat ttaaatggaa gaacaaacca ttcatatttc
    34021 aatatcagat gcagcacaag cccattttgc cagactatta gaacagcaag aagagggaac
    34081 taatatccgt atttttgtgg tcaatcccgg cacaccgggg gcagaatgcg gtgtctctta
    34141 ctgcccaccc aatgcagttg aagagacgga taccgaattt aaatttaacc gtttctctgc
    34201 atttgtcgat gatattagct taccgttttt agacgaagcg gaaattgatt atgtaaccga
    34261 cccaatgggt tcacaactta ccctcaaagc ccctaacgcc aaaatgcgta aagtggctga
    34321 tgatgcaccg tttatcgagc gtttagatta tgtgattcaa acccaagtca atccacaact
    34381 tgccagccac ggcggtaaag tgaccttaat tgaaatcacc gaagataaat atgccgtgct
    34441 acaattcggc ggtggttgta acggttgctc aatggtggat gtgaccttaa aagagggaat
    34501 tgagaaacag cttctggcaa tgttccctga tgaattagtt ggtgtgaaag atattaccga
    34561 acaccaacac ggtgaacatt cttactatta aaaatactaa aagggataaa tcattgattt
    34621 atccctttct tataattaat gagcaagcgg tcaaatttac tcgctttcgc tcgcacttcg
    34681 tgccatcagc aaagccgatg ttcaaacgca agcgtttgta caaaaaaatg agtaaattcg
    34741 accgcttgtt aagtttgatt aagccttacg actctcttgg tgatctttcg cagctttcac
    34801 aaaacctgca aataatggat gaccatcacg cggagttgag gtaaattccg gatggaattg
    34861 tgctgctata aaccaagggt gatttggcac ttcaataatt tccactaatt tacgatctgc
    34921 cgataaaccg ctcactttta agcctgccgc ttcaatttgt ggtaacagct tattgtttac
    34981 ttcgtaacgg tggcgatgac gttcaacaat cgtttccgca ccatataact cacgagcttt
    35041 tgagccttca attaaatggc attgttgtga gcctaaacgc attgtaccac ctaaatctga
    35101 ctcatcgctg cgggtttcca cattcccttc cgcatcttgc cattcggtaa ttaagccaat
    35161 caccggctgt gagcaatctt tatcaaattc agaagaattt gcctcggtta aacctgccac
    35221 attacgggca tattcaatta gggcgatctg catacctaaa cagataccta agtaaggaat
    35281 cttgttttca cgggcatatt gtgcggttcg aattttgcct tccacgccac gatagccaaa
    35341 gccgcccggc acaagaatgc cgtctaagcc tgccaataac tctgtgcctt tggtttcaat
    35401 atcttgtgaa tcaatgtatt taatattcac tgttaaacga tgcgttaaac ctgcgtgttt
    35461 caaagcctca ttcaccgatt tatacgcatc aggtaattcc acatattttc cgaccatacc
    35521 gatagtcact tcgccggttg ggtttgcttg gcagtatagc acttgttccc actctgaaag
    35581 atcggcttct ttgcaatcta aacggaaacg atcgcacaca aaggaatcta acccttgcga
    35641 tttcaataat tccggaatgc gataaatcga atctacatct ttaagcgaaa taaccgcacg
    35701 ctccggcaca ttacagaaaa gggcgatttt tttcttctca ttttccggaa tagcacgatc
    35761 tgaacggcaa attaacacat ccggctgaat accgattgaa agcaactctt ttactgaatg
    35821 ctgagtcggc ttagttttca cttcccctgc ggttggaata taaggcacta aggttaaatg
    35881 cataaacaag gttttttcac gaccgatatc caccgctaat tggcggagtg cttctaagaa
    35941 tggcagtgat tcaatatccc ccaccgtgcc acctacttct acaatggcga catcacgccc
    36001 tttaccgcct tctaacacac gggctttaat ctcgttggta atatgcggaa taacctgaat
    36061 ggttgcacct aaatagtcgc cacggcgttc tttacgcaac acttcagagt aaattttacc
    36121 gctggtaaag ttgttggctt tgctcatttt tgaacggata aaacgctcgt agtgacctaa
    36181 atccaaatcg gtttccgcac cgtcttcggt cacaaatacc tccccgtgct gagttggact
    36241 cattgtaccc ggatcgacat tgatataagg atcaagcttc ataatggtta catttaaacc
    36301 acgagcttcc agaatagatg ctaaagaggc tgccgcaata cccttcccta aagaagatac
    36361 aacaccgcct gtgacgaaaa tataattcgt tgtcattgtg attgcctttg ctgattgatt
    36421 aggttggaaa ttcagaatat cagtttactt cgtaaaaaag aaactatcag gacgggaaag
    36481 tagtttacat caaattacat ttttttgcta atggaaaatc ggcaagcagt cagattaatt
    36541 cttttttcaa taatgccgac taatcttaat taatacacta ttatttgcga tagatcagaa
    36601 ttaacctaca tgtttataga tatcataata cctgtttttc taatactgga gacgatacaa
    36661 tgaaaatcaa aaaattacta ctgccaactc tgttaagcat tgctactatg ccaattcaag
    36721 cagccgacct acctaatatt acaattcttg caactggagg gacaattgcc ggtagccaaa
    36781 aaaatacggc aacctcagct tatcaagctg ggcagctaaa tattgaaaca ctcatagaag
    36841 ccgtcccgga tattaaaaaa ttagcaaata tcaaaggaga acaaatcgtt aaaatcggat
    36901 ctcaggatat gtctgatgaa gtatggctaa aactggcaaa agcaattaat caacaatgcc
    36961 caaacacaga tggcttcgtt attacgcacg gcacagacac tatggaggaa accgtatact
    37021 tccttgatat gactgtaaaa tgcgaaaaac ccgtagtatt agtgggggcc atgcgaccag
    37081 caactgaaaa aagtgccgac ggcgtattaa atttatataa ctcagttgtt gtcgccaaag
    37141 attctaaatc tagtggcaga ggggtgttgg ttgcaatgaa tgatattgta ttgggcgctc
    37201 gcgatgttac aaaaaccagt actacatcag tgcaaacatt taactcacca aactttggcg
    37261 cactaggcta tatccataat agcaaagttg attatgagcg ctctcctgaa agtaaacaca
    37321 ccgtaaacac ccctttcaaa gtagatgaat taacggaatt gccaaaagtc ggcattattt
    37381 atgcttattc aaatatgcca accgaaccgc ttcaagcatt attagatgcg agttatcaag
    37441 gcatcgtggt tgcaggagtt ggcaatggca atatgaatgc ggctaatttg gctttacttg
    37501 aagaagcagc taaaaaagga attaccgtgg ttcgctcgtc tcgagtgcca accggatata
    37561 ctacccgaga tgcagaaatt gatgatagca agtatggttt tattgcttcc ggcacattaa
    37621 atcctcaaaa agctcgagta ttactgcagc tcgccttaac acaaacaaat gatataaaaa
    37681 ctattcaaca atattttgaa gatttctaaa aagtaaataa caagcggtct attttgcaaa
    37741 acaaatcaca aaatagaccg cttgtctcat tactaatctt tattatttta caaagctatc
    37801 aaaagttagc tcataattgt cgccatcacg actataggcg atatagcgag ggaatttttc
    37861 accttcaaat tttttcaccg taatgtcttt tttatcactg gttctaaact tgtaggtaat
    37921 ttcttggtag gttttgccgc ctacttttac ctctttttgg gctttgcgta gctgcacatt
    37981 cggtgttggg taaagttttt taccgttagt agtttgaaaa ctgctcggta atttatcgta
    38041 atagctcaac tgaaaggctg tggtgaacaa atcataagtt ggcatagtca gcgcttcttc
    38101 ttttagtggc tctttcactt tgccatattt taccgtttta gaatcaattt ctgccatcgc
    38161 ataagttttg ccgttacggg tatctcggta gctcaacata tgaaattgtt cgtttttttc
    38221 tgttcccttc gcagaaaaga caatattata taaaggcaca ttaatttttg cctgaatatt
    38281 atattggcca ccaccgttat taaagttaat gtaggctggc attaaataat ttgagctgta
    38341 tttcaactta aaattctccg cactggcgtt tgaaatcaag cccaaagtga ccacgattac
    38401 gctcgctaac ttctgccaaa ttctcatcta tttctcctct aaagatatac tttcgaacaa
    38461 ccttgaaatt gcattgttat ctcgtaattg ttccgctttc tccacttgta cccgtgttaa
    38521 atgtggcgaa aaataattaa taaaatcata catatagtta cgaagaaaag ttcctcgttt
    38581 aaaggcgatt tgcgtcatac tcggttgaaa caggtgactt gcattgatag cgactaagtc
    38641 tttatccgtt tccgtatgtg ccattgatgc cataatacca acccctaagc ctaagcgtac
    38701 ataagttttg attacatcag catctgtcgc cgtaaatacg atattaggca aaataccttc
    38761 cttattgaag gcatgatcta aatccgattg ccctgtaaaa ccaaaagtat aggttatcaa
    38821 atcatatcta cctaattgtt cgacagtcaa atttttactt tggttcacaa aagccgcaag
    38881 aggatgctct ggtttgacaa taactgaacg attccaccaa taacacggca ataaaaccgc
    38941 ttcatcaaat aaatattgag cttctgtggt aatggctaaa tccacttctc cagccaccaa
    39001 agcatcataa atttgattcg gggagccttg gtgcaaatgc aaacttactt caggatagcg
    39061 agccttaaac ttctcaatta cactcggtag catataacgg gcttgggtat tggtggtcgc
    39121 aatgcgtaag atgcctttgt tgggtcgagt ttgttcttca gcaaccgatt taatgctctg
    39181 ggcttttacc aataattcac gagcaatcgc cacaattttt tcaccagcag gcgttagccc
    39241 cttaacgtgc ttaccgttac gctcaaaaat attaattccc aactcacttt ccaacaaacg
    39301 aacttgtttg ctaatccccg gttgagaagt gtaaagcacc tctgcggcct cggtaatatt
    39361 caagttctgg tttactattt caacgatata acgtaactgt tgtagcttca taatgatttc
    39421 ccctctacaa tcgcaataat ctgttgcatc gtatgcactt cgtaagttgg cttaatatcc
    39481 gtatcattct ctttactaag caaatttaac caacaagtat caattccagc attattacct
    39541 cctaaaatat cagaagcgag ggtatcgcct accataagca ctttagtacg atcaaattcg
    39601 tccattaatg caaaagcgta atcaaacact tggcgatcag gctttgcggc accaatttgt
    39661 tctgatatca ctacaatatc aaaaaaatgt gaagtttgag tattatctaa acgtttttgc
    39721 tgcaaatcgg taaaaccatt ggtgataatg cccattttta ctttaccata taaagcattt
    39781 aacatatcca ttacaccttc taaaggctga ctgacgaatg ccatctccgc cattaactct
    39841 tgattaagtt gtagcggatc tacgcctgtt tgagcagata attttacaaa acgtctggtt
    39901 tgaatatctt gagcagtgat ctcattattt tggtaagcca cccaaagtgg tttatttacc
    39961 gcttgaaagt cttgataatc ttgttcacta aaatcaattt ggtaacgagc cagcatcgct
    40021 tttaaaccaa gataagaatt aaatgaaaac aaggtttcat cagcatcaaa taatacccat
    40081 tgatatttca taatattcct tttttaactt agataacaag cggtcaaatt tttctaattt
    40141 ttcgcatacc gctgataaag ccacgcttaa gcacaacact ctttcatttt ttgctgaatc
    40201 cactcaacaa aaaattgtac tttctgaact tgggctgatt gcgaaggata gacaacatag
    40261 aacgattttt catcaaacaa tgtggttggg aaaggctcta ttaaagtacc tttttcaatt
    40321 tcgtgctgtg ccaacaactg gttggcaatc gcaatgcctt gttggtgcat tgcagcttga
    40381 agcaccataa aagtatggct aaaaattgag ccagtttccg catctactat atcttctata
    40441 tgcaaatgtt caaccattct tttccactta ttatgggtgg aggaatgtaa taaatgctta
    40501 cctgctaaat ccgccggtaa atgaatggta ttttgcgata aatactcagg cgaagctaaa
    40561 ataacaatac gggattccgt caaacggata gattccagac cttgccaatc ccccttacca
    40621 taataaatag caacatctgt ttctttacct aataatccct catcttgatc aacaccctta
    40681 atacgtactt ccacttctgg atatttttcg tggaaatccg ccaaacgtgg gactaaccaa
    40741 tgcataccaa atgtttgtgg tacgctaata gtcagaattt gacgactact ttgctgccta
    40801 attttatctg ttgcgagagc aatttgttct aataatggct gaacttcata gaaatattgt
    40861 gcgcctaact cagttaattc cagcaaacgg ttacggcgat ggaacaggga agcacctaaa
    40921 aaatcttcta atagtttaat ttggtggctc actgcagctt gtgtgacgaa gagatcttct
    40981 gccgctttag taaaatttaa atggcgtgca gcagattcaa atgctttcaa tgcattgagt
    41041 ggtggaagtt ttttgttcat aatttttcaa tctaatagat tactaaacaa gcaactctat
    41101 tattttttct gatagtttaa ataaaaaaaa ttcgtttgat gcttgcaaat agaaataata
    41161 aaatatccgc atacttagat ggatagttta gaatttattt ctattcctaa attttaagta
    41221 tgatgttgtg tttgcatatt ggtctaggaa actagactag agtaacgaaa gttacttgtt
    41281 tcacttcctg tatattttga accgtattgg tttataaccg cccactttgg gcggtttttt
    41341 tctatgtaaa aaaacagcac aaaacctaga tcgcattcta tattattcgc tacctttatt
    41401 ctagcctttc tgctttttta ttctttcact ttaatctatt ataaaaagag gttttatagt
    41461 atgctaaagc ctatttttca tttgcaataa ttaccgagag ttcttttgag taaaccgaaa
    41521 ttaacccata accaacagcg tagaatccaa tctaaccatc ataagcgtat caacaaaaaa
    41581 gagattgaat ggcaagatga aatgttagga gaaatgcaac agggcatcgt cgttactcgc
    41641 cacgttaaac acgctgatgt tgaaaccgca gaggggcaaa ttttccgctg taatatccgc
    41701 cgtacattga aaaatgtagt ggtgggcgat caggtttctt ggcgtaaagg tagtgagcaa
    41761 ctacaaggga ttagtggggt cattgaagcc gtcttcccac gtaaaaatga acttacccgc
    41821 cccgattatt atgacggtat taaggtgatg gcatcgaaca tcgatcaaat cattattgta
    41881 tcagctgtgc tacctacact ttcgctgaat attatcgacc gttatttagt gatttgcgaa
    41941 acggcgaata ttcctgcctt aatcgtgcta aacaaaattg atttattaaa cgaaagcgaa
    42001 cggcaagcag ttaaagagca gctcaaaatc tatgaagaga ttggctatga aaccctatgt
    42061 ttatcggctg atacgggtga aaatatgcag gcgttacacc aatatcttgc taaaggtacg
    42121 tctatttttg tcggacaatc cggcgtgggg aaatccagcc taattaacca actgttacct
    42181 gaagtcaatg ctctcactgg ctcagtgagc gataactcag ggttaggtca gcacaccacc
    42241 actgcctctc gcttatacca tttaccgcaa ggcggacagc tgattgactc gccgggcatt
    42301 cgagaatttg gcttatggca tttagaacct gagcaaatca ccttaggcta tcgagaattt
    42361 caatcggttt taggcacgtg caaattccgt gattgcaaac acaaaaccga cccgggttgt
    42421 gccttaagac aagaggtcga aaatggcgaa atttctgcaa ttcggtttga aaattaccat
    42481 cgcttaattg aaagcctgtc tgaaaccaaa agccaacgcc atttcagaaa agaagaagta
    42541 taatgaatga atttatttac cctaacgccc gattaatcgc cggtgttgac gaagtcggac
    42601 gaggaccttt agtcggagcg gttgtgaccg cagccgtgat tttagatccg aataacccga
    42661 ttcagggctt aaccgattcc aaaaaattat ccgagaaaaa acgccaagct ttggcagaag
    42721 agattaaagc caaggctctg agctggtcgc taggacgtgc cgagccgaca gaaattgatg
    42781 agctgaatat tttaaatgcg acaatgttgg caatgcaacg tgcggttgcc ggcttgcata
    42841 ttcagccgga ttttgtgcta attgacggca atcgtccgcc aaaactgcca atgccggcac
    42901 aagcggtggt gaaaggagac agcttagtgg ctgaaatcag tgctgcttcg attattgcca
    42961 aagtcgcccg agatcaagaa atggacgaat tagaccaaca atttccgcaa tacggcttcg
    43021 cacagcacaa aggctacccg actaaactcc attttgaaaa attagcagaa tttggggcaa
    43081 caccttatca tcgtaagagt tttgcccctg taagaaaagt attaggttta atcgattaga
    43141 aggaaaacac aatgactaca gagtaccaaa aaacgatttt caccaaaatc atcaataaag
    43201 aaattccggc aaatattgtc tatcaagatg aacttgtgac cgcatttcgt gatattgctc
    43261 cacaagcacc cacgcatatt ttgattattc cgaataaatt tattccaacc gtcaatcacg
    43321 tgagtaatga agatgaatta gccctagggc gtttatttac ggtggcggca aaattagccc
    43381 aagaagaagg cattgccgaa gaaggctatc gcttagtgat gaattgtaat aaaaacggcg
    43441 ggcaggaagt gttccatatt catatgcact tgttaggcgg acaaaaacta ggacctttag
    43501 tggcaaaata actatgcgta tttcctactt tgcatttgca attttttcga tttttttgac
    43561 cgcttgtggt agcaaacctg tcagctattt accaaccggc tcagagccta ttgtcaatat
    43621 tgagtctgac attgctgaaa agatagagct ggaaacgaat agcaagcaat ttagcaccac
    43681 aaatttaact gaatttccgc ttaatcttac ttataaatta ttttggtata ataaagatgg
    43741 ggtaacacaa tcccataacg gtatatcaga tagtatcggc tggcaacatc tatggttgca
    43801 acctaagcaa aaacagacca ttgcactcat taaaccgacg gaagaaagcc ataattaccg
    43861 cctctattta cgaggcgtaa aatagcaaaa aagcagagcc aactgctctg cttctttatt
    43921 tatttcaaaa acgggttggt ctgtttttcc cgcccgatag ttgtgtgtgg accatgtccc
    43981 ggtatgatga tgaaatcatc atctaaatca aacatttttt ccctgatcgt ttccaataac
    44041 tggctatggt tgcctaaata gagatctgtt cgacctatgc tattttggaa taaaacatcg
    44101 ccactaaaag caatacgatt gtcaaaatca aaaaaaccga tatgacccgg agcatgaccc
    44161 ggcaaatgtc gaacggtata gctcagctcg ccgacttcga cccgatcacc ttcctccaac
    44221 caatgatccg gcaaaaagcc atttactggt ggtaatccaa attgttggca catttccggc
    44281 aaacgttcaa ataaaggttt atctgcaaga tgcgagccga aaacctctac ttgaaaatgc
    44341 tctctcaact tttccaccgc cataatatga tctaaatgac cgtgcgtaat caataatttc
    44401 tgaaccttaa gctgctgaga ttcaacaaat tgaataatgc cttcggcatt atcgccgcca
    44461 tcaataatag ccgcattctt attttcgtcc caaatcaccg tgcaattttg ttgaaatgga
    44521 ctaacaggaa taatttgcaa attaaacata aaataagacc gcttgttagc ctctccaagt
    44581 gcgaactggg ccagtatcta cgtgaacaaa gttactacga ggataataac ctacgccacc
    44641 attattcaag ctctcagccg cttgttttac tttatataac ggcacacctg atacttggaa
    44701 atctactgct tgcccaagaa tatggtaact atggctggca acaccacggc ttctacgacg
    44761 aagtcttgca tttgtttgtg cggagcgata gccacttaat actaggattt ccgcattatg
    44821 gaaacctaaa cggcgttgta attgattcaa tttgacaaat aattttggat caattgcttt
    44881 aacttgattg atatgacgat cccgcattaa atagtttaac tggcttaaat cggttttatt
    44941 taatccacct gcaccaaatt tagcagtgta agtatcgcct gtattcacat tacgaaaacg
    45001 taacgcagct ggggcaggag tagaaagcgc tgccattact tgacccggca gaaggctagc
    45061 ccctaaaaca agtccgccga gtgatagcca cttacggcgt tgaacattaa tttgtttcat
    45121 tttttcctca taggttagct aatgatttat agaaaatcac tcacaaatga gcgaatttct
    45181 atacaccata cttaaagtaa aaatttacaa tcgtaaattt atgtaagcta tattttcaaa
    45241 aagttccaag aagatgatat cttcttggaa tttatcagaa atagcacgat taaataatgc
    45301 tctttaattt tccccaattc acagaatgtt gtgggatttt ggcatcaaag ttataaatgt
    45361 ccggaagggt ttgcactttt ccaccttcaa cccaagccgt cacataatag agataaaccg
    45421 ggttatctga acgaatctga gccgaggtcg tcttcttact gcctaagact tgattctttt
    45481 tatcagatcc ccaacccgct tcttttaata aaatggttgc caattcatca gatttttcta
    45541 cacggacaca accagaactt aacgcacgcc ccgttttacc aaataatcct ctatttggcg
    45601 tatcatgcaa ataaattgca tccgaacttg gcatattaaa tttataacgt cctaaagcgc
    45661 tatcatcacc tgctttctgg cgaatacggt atggtgaact tttagcattt aaatattgtg
    45721 accaatttac gctacgcgga ttaattttat tgccactact atcaagaatt tcgaaactag
    45781 cacgatctgc ataacctggg tcacgcgcta gtttaggaat aatatcttta gtcataatac
    45841 tagtcggtac attccaaggt ggattcacta ccacattgct cagcttacta tacattaccg
    45901 gtgtacggcg atcttctcgc ccaacaatca ctttagattg aagagctaaa ttaccatcac
    45961 ggaaataata taattgatag cttgggatat tcacaaaaat tccattgtta aaacttggaa
    46021 taatacgtaa acgttgagca ttgagcgcta atttatagaa agaagcccca ttaccgccac
    46081 cagctacctc cgtaacagct ttaccttttt tggctttagg tgctgaagag cctcctgcca
    46141 ttgccaatac tctctgtgcc gtatcacgat ataaatggtt tcttggaaca aggtctgtta
    46201 caaactgccc agaatcgcct tccctcacgg cattagtcca ttggaagatt tgctctgaag
    46261 agggcgattt tggtacataa ctgcctaagt tatataacca attatttgca tttttaaaca
    46321 catttttgtt gtaatacaaa taatctaaga agccatcagt taataaaata tctctaccta
    46381 aaccttccgg ttgatttaag atttgctgca atgccttagc tgatttagag gataccccac
    46441 ttactgcaaa taatgcatat tctttcaaaa atgctttttc tgcggcttta tcattccaca
    46501 ttgtcgcaaa ttcactgtct aaataaacct tagttgttgc ttggctcagc aataaggcat
    46561 tattacctat ttcttgctta attcttgctt ccgcttctgc aaattttctt gcttgctctt
    46621 gacgaatttg ttcctgttct aacgcataat cggcctgttt taccaattct gcagcacgag
    46681 cctgctgagc tgcaaaactt aattgtggta aaatattatc ttgtacaaca ggctcagaag
    46741 ccacctgagc aactgtggct gtttcagcca aagccatgcc agaaaacgcc accataatag
    46801 gtaataattt aaaggttttc acccactctt cctcttaata tttgcaaatt tataaaaaaa
    46861 taaaccgctt agcggagcta agcggtacgt tatgtgcgca ttataaacac atttatgatt
    46921 ttttatcaaa ttctgaccaa tcaagcatca tctgttcagc ttcttttaag aaaaagtccg
    46981 gtgcttcata gtcttttggt aaatcatcaa tatcttttaa tgcttttttg ccttcacggg
    47041 caaaacgagc attaatatct tttaagcgct tgctttcatc tgctttattt tctttcaggc
    47101 gttcttctaa atttaacgat aaaaacttac gctcatcacg ttcttttcga atcgcaatat
    47161 tctcgtttaa tactataaac tctgggtttt tagcaatacg ctcttgatgt ttcgctgtta
    47221 atgcagcaac cgcgttacga gcattcccag cctctttata attagctgct ggaattttat
    47281 cccaaggaag cgcattatct tcaaaacttt cacctgtttt tgcagcatta atgatttccg
    47341 ggaatttaat atccgcctca acccctttta gctgggtact tccaccattg atacggtaga
    47401 atttttgaat cgtatattgg ataaaaccaa gaggctcttg atccaaatca tatacaaaat
    47461 tcaatgaacg gctctgttga acagttccct taccaaaggt ttgttgccct acaataattg
    47521 cacggttgta atcttgcatt gccgcagcga agatttcaga ggctgaagca ctatggcgat
    47581 taatcatcac catcactttt ccatcataaa ctgattttga ttctggatct tcgtgtactt
    47641 tgatacgatt gaatgcgtct tgtacttgca ctacaggccc atctttaata aataaaccag
    47701 ttaattcaat cacttcagtt aacgaaccac caccgttttc acgtaaatca atgatcaatc
    47761 cttcaacatt ttttttctct atttgagtaa gtaatttacg tacatctgaa gtcaaaccga
    47821 tataaaaagt agggatctta attaccccta cattttttcc atctactttt tctaccgtta
    47881 atttagcagc actatcctca atacgaactt tatcacgcac aagggtaata attttagttt
    47941 ttccaccttt ttcaggctca atttctaaac gaactttagt gcctttttta cctttgattt
    48001 tatcgactac attatccaaa cgccaaccga taacatcttc aatctcacct ctctcacctt
    48061 gacctacacc gacaatttta tcgccgacta ccagcttctt acttttagcg gcaggggctc
    48121 ctggcactaa tgctctaatg ctggttacat catcttcttg ggttagcgtt gcaccaattc
    48181 cttctagcga cagattcatg ctctcttgga acgcttttgc cgcacgagga gacaaatagc
    48241 tagtgtgggg atcgatctca cgagagaatg aatttaagta agtttgtaaa atatcatcag
    48301 ccttaacttg agttaaacgc ttaatcgcaa agttataacg tttagtgagt gttttcttaa
    48361 tttcaggcca ttttttatct ttaagatata aattgataat atcgttttta actcgctgct
    48421 cccaaagtgt atttgcctct tctacacttt ttggaaatgc ggccttctca cggtcaatct
    48481 caatttcatc attccctttt aagtcaggct ctttatctag taaagataag gcatagctat
    48541 aacgctcata acgacgttta gacattaact catacattgc aaatgctgca tctaatttac
    48601 cagcatataa atcatcatct aatgttgtag catatttact acgcatttca tcaatatcgg
    48661 cttgaagaaa agtattatga gaaggatcaa gccaatcgac atagcggtta aaaatcttcc
    48721 ctgcaaactc atcattcagt tgaaatttat gataatgcga ttgagttaat cgggctgtta
    48781 cacgcttggt tgataagcta tgctgctcat taggttttgg catcacaatc gcactttctt
    48841 taatgtccgg ctgaacggca aaagcgtttc ctatcattaa acctagggct agggcaaaaa
    48901 ttttatttaa tcttgttaat ttcatcttct tttccaaata atcaagcggt catttttttg
    48961 caaaatttta ctaaaatccg accgcttgta agcacaaagc gacttgaaaa ctatttacga
    49021 ccgaatttat ctgctaatgc agctaatttt tcttctgaag ctttaggtaa attatctatt
    49081 gcttttttcg ccttaaattc tgcacgcttt ttcgcatttt cttcacgtgc tttctgtttg
    49141 aagtactctt tacgttgtgc tttacgctct tgtgctttac gttctgcaac caccgctttc
    49201 gcagcagcca aagcttctgc ggcgtgagta gcttcgtctt ctgttaccac gccaacttct
    49261 tcaccctgta agccgacacg agcaacatta gcttggctgg cagccaagta acgccaagaa
    49321 ttagtgtaat tccgcaatac ttggcgcaat aacgttttac tgattttctc atcatctttt
    49381 aatgcttcag ctaattcctg aaacaaccca actttcaatg gttttacttc accttcaagc
    49441 gtgaaacaaa gcggaaattt ctccgctaaa taagcaatca cttccttggt acttggattg
    49501 gttttattct gagtttgttc tactttttgc tcaatttgct
//
LOCUS       DANLZQ010000007        47893 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.007, whole genome shotgun sequence.
ACCESSION   DANLZQ010000007 DANLZQ010000000
VERSION     DANLZQ010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 47893)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 47893)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..47893
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.007"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            77..553
                     /gene="greA"
                     /locus_tag="PXE50_000345"
     CDS             77..553
                     /gene="greA"
                     /locus_tag="PXE50_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HDL5621285.1"
                     /translation="MKQIPMTVRGAEQLREELDFLKNVRRPQIIDAIAEAREHGDLKE
                     NAEYHAAREQQGFCEGRIQEIEGKLGNAQIIDVTKMANNGKVIFGATVQLVNADTDEE
                     VTYRIVGDDEANIKEGLISVNSPIARGLIGKEVDDSVSITTPGGKVEFDIVGVEYI"
     gene            complement(609..1025)
                     /gene="ndk"
                     /locus_tag="PXE50_000346"
     CDS             complement(609..1025)
                     /gene="ndk"
                     /locus_tag="PXE50_000346"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HDL5621286.1"
                     /translation="MIQQTLSIIKPDATRRNLIGKILAQLEENGLTIKALKKVHLTRE
                     QAEGFYAEHKGKDFFEPLVEFMTSGSIVVSVLEGENAISHYRALMGATNPDNREKGTI
                     RDLYALSMRENSVHGSDSEESAKREIAYFFVPSEIV"
     gene            complement(1035..3113)
                     /gene="metG"
                     /locus_tag="PXE50_000347"
     CDS             complement(1035..3113)
                     /gene="metG"
                     /locus_tag="PXE50_000347"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HDL5621287.1"
                     /translation="MANQKRKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGN
                     EVHFVCADDAHGTPIMLNADKLGITPEQLIEKAKADHEADFASFNISFDNYHSTHSEE
                     NRQITTDIYKTLKANGFIKSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCE
                     VCASTYSPMDLINPRSAVSGATPVVKESEHFFFDLPSFEGMLKEWTRSGSLQPEIANK
                     MQEWFESGLQQWDISRDAPYFGFEIPDAENKFFYVWLDAPIGYIASFKNLCDRAGIDF
                     DEFWQKDSTTELYHFIGKDIVYFHSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSK
                     SRGTFIQANTYLKHLDPECLRYYYAAKLNDRIEDLDFNLDDFVQRVNSDIVNKLVNLA
                     SRNASFIAKRFEGKLAEKLDDEALFNEFTAQAETIANFYENREFNKAIRAIMELTDKA
                     NKYIDDKAPWVIAKEEGKEAELQAVCSMGIELFRVLMSYLKPVLPKLAERAEAFLQSE
                     LRWDNIATPLFGHTVAPFKSLFSRLEKKQIDAVIDETKALFAEANKKTENQTKGTQKV
                     EQQAVEKQENIAVEPISPEITIDDFAKLDLRAAKVLNCEAVPKSDKMLRFELDLGDHQ
                     RQVFSGIKAAYPNPEALIGRFVIVIANLAPRKMSFGMSEGMILSAGTGGANLFLLDAD
                     SGVQPGMQVK"
     gene            3325..4296
                     /gene="menC"
                     /locus_tag="PXE50_000348"
     CDS             3325..4296
                     /gene="menC"
                     /locus_tag="PXE50_000348"
                     /EC_number="4.2.1.113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HDL5621288.1"
                     /translation="MRQVKLYRYQLPIQTGVVLRKQPLKERQGVLVCLQEQEKVGWGE
                     IAPLPSFSQESLEQAENQAVNWLKAWQKGEPETLEQLFPSVAFGLSCALAELNNELGE
                     QANNQSAVLCYGDLEKLHTAFSQHTNPIGKIKIGLNPEQEGEQANLLLHTFPNLRLRL
                     DANRLWSLEQAVKFAEKIANEHKPRIQFIEEPCQALELSRQFATQTDIAIAWDETVRE
                     ANFLVKKEPNLTAIIIKPTLVGSLEKCVNLIQQAQKQGLVAVISSSLESSLGLTQLAR
                     IAQQYTPNSVPGLDTLNLMQHQLLRDWHDSSLPLVGLESEFVREVVV"
     gene            4541..5242
                     /gene="rsuA"
                     /locus_tag="PXE50_000349"
     CDS             4541..5242
                     /gene="rsuA"
                     /locus_tag="PXE50_000349"
                     /EC_number="5.4.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA pseudouridine(516) synthase RsuA"
                     /protein_id="HDL5621289.1"
                     /translation="MRLDKFIAENTGLTRSQAAKVLKSGVVTVNGNIEKSGAAKISQE
                     DEIYYEDQKLEWVEEGQYFMLYKPQGYICSHDDGEYPTVFQFFDYPLMTKLHTAGRLD
                     VDTTGLVLLTDDGKWSHRITSPKHHCEKTYLVTLADPVEDFYAQRLAEGILLRGEKEP
                     TLPAQLEILDDYNVNLTISEGRYHQVKRMFAALGNKVEALHRWRIGDVVLDERLEEGE
                     FRSLTSEEIASFNGK"
     gene            5232..6413
                     /locus_tag="PXE50_000350"
     CDS             5232..6413
                     /locus_tag="PXE50_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bcr/CflA family multidrug efflux MFS
                     transporter"
                     /protein_id="HDL5621290.1"
                     /translation="MESRRPSLSFFIILGMMAMLPPLAIDMYLPSFLDIARDLAVSQE
                     KVQTTLAVFTLGFGAGQLFWGPMADSFGRKIIILIGLVGSAIAAYFLTQVQNIETFYL
                     LRLVQGLCAAAPAVVLGALVRDLFERNLFAKLMSVIMIISMLAPLLAPIVGGYIAKYF
                     HWHSIFYVLVAMGILCVVLISWKIPETLAPEKRLPLSFGKTLSNFAILLKHRPTLGYV
                     LIGGLTFAGIFCFLTSGSIVYIGLYGVSQENFGYFFGLNMIVMVTMTAINSKMVVKVG
                     SETMLRIALAMQLLAGIWLALVAIFDLGFWAMAIGIPLYIGMLSTIGSNASAAILEQF
                     PQMAGTANGVAGTARFGVASLVGAGLSHIAVTSAAPMLLAMALCVMLAGVVYYFLCYK
                     R"
     gene            complement(6553..7872)
                     /gene="rlmD"
                     /locus_tag="PXE50_000351"
     CDS             complement(6553..7872)
                     /gene="rlmD"
                     /locus_tag="PXE50_000351"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HDL5621291.1"
                     /translation="MAIFYSEKSAKKPIKSPACQKATIQSLDYQGLGIAKINGKTWFI
                     ENALPDEQVEFKVLEEKRQYGRGQAVKILKKSANRRMPSCELYGQCGGCQMQHISLEL
                     QRKAKQQALFQRLQKLQTHAIDVQPMIIGNDKHYRRRAKLSIAIQQGKAVIGFRLQNS
                     NQIIPLAHCEVLVEPLANLLPKLKHLIENWQQPKKLGHIELVSADNTIALFFRHLGAL
                     SAQDNHNLRQFATQEQLSLFVMTSENHIEHLCGERPYYQIQGLKLHFSIRDFIQVNAT
                     LNEKMVEKALEWLELSNQDRVLDLFCGMGNFTLPIAERAKSVVGVEGVEPMVQQAREN
                     AVTSGLKNVEFYQTNLDEPFSDKPWAKEPFNKVLLDPARNGALFCLDHLTSLNPERIV
                     YVSCNPATLVRDAEKLLQLGYRLEKAAMIDMFPHTGHLESISLFLKS"
     gene            7957..9282
                     /locus_tag="PXE50_000352"
     CDS             7957..9282
                     /locus_tag="PXE50_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyguanosinetriphosphate triphosphohydrolase
                     family protein"
                     /protein_id="HDL5621292.1"
                     /translation="MISSVWNERYLADKKREQDHRSPFQRDRARLLHSEAFRCLQAKT
                     QIHAVGEDDFYRTRLTHSLEVAQIGSSLREKLLADVEGFQAVCSEQEFAKNMANLTAL
                     LPDHSLVESLCFAHDLGHPPFGHGGEMALNYKMYAFGGFEGNAQSFRIMTQLEPYTET
                     AGMNLTRRTLLGVMKYPALLSQTSPIEPAEMSEARHINLHHFPQSKGIFDDNNHFFEW
                     VLAPLSEKDRRQFCTVQPNQDPKQPNKTQYKSLDCSIMELADDIAYGVHDLEDAIVGG
                     MVTPQSWQNAEKLLAECQSDWVKQRLPEIREKLFSQHRYERKDVIGALVNHFITNVRW
                     KALPEFDEPLLRYNAYLPESVACVLKILKDFVYQYVICDAKTQRVERKGQRILMELFD
                     ILSSDPMRLLPNNVRERWKNAEESKRARVICDYLAGMSDGQAFKLFESL"
     gene            9403..9702
                     /locus_tag="PXE50_000353"
     CDS             9403..9702
                     /locus_tag="PXE50_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621293.1"
                     /translation="MRFLPSEIYQPRGELVKADRQGNGEFEVEYRVSGNDVRGLAKSA
                     IAHAKRKGFHLVESDIHRDDADLKFKRGDQELDIEIEVKGRNRIEYKADLDLDKN"
     gene            9863..12775
                     /gene="rapA"
                     /locus_tag="PXE50_000354"
     CDS             9863..12775
                     /gene="rapA"
                     /locus_tag="PXE50_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-associated protein RapA"
                     /protein_id="HDL5621294.1"
                     /translation="MFLVGQRWLSESENNLGLGIVTSVDHRTVTINFPAAEEERVYAI
                     AVAPLTRVQFQAGDRINSIDGWQLEVSEVVENQGAVIYLGKRVDNGEEAVLPEMLLDH
                     KISFSKPQDRLFSAQIDRSDRFALRFNALQHQQAQYQSPLRGLRGIRASLIPHQLHIA
                     KEVGQRLAPRVLLADEVGLGKTIEAGMILQQQLFSGRAERVLVLVPESLQHQWLVEML
                     RRFNLKFSLFDEERCSDFDKQDENGDDVSENPFESEALVITSLNWLETSPQRANQVLA
                     ADWDLLIVDEAHHLEWSETESSIGYQLVERLSQQIPAVLLLTATPEQLGQESHFARLA
                     LLDSDRFYDYAEFVQEQAQYKPVADAVSSLLSDKPLSNDEQNAIAELLSEQDTEPMFR
                     AINSKKSDENDRLQARQELISELIDRHGTSRVLFRNTRQGVKGFPHREYHQISLEMPK
                     QYQNALKVMGMMGSVSQSDLLYPEYLFQRMNPNAKWAEFDPRIDWLITFLKNHRDEKV
                     LVICKQADTAIALEQVLREREAIRSAVFHEKMSIVERDKAAAYFAQQEEGAQVLISSS
                     IGSEGRNFQFAKDLVLFNLPDNPDLLEQSIGRLDRIGQKNDIQIYVPCFNLSAQQMLA
                     EWYHKGLNAFEETCPMGTAIFRELGEELQQFLQKPELSAQFDDFVAKTYKRQQYLKAE
                     LEKGQDRLLELNSNGGEAAQQLANDIAKEDNNPQLVNFALSLFDVIGVEQEDLGEQSI
                     VISPTGHMLVPDFPGLSEDGTTITFNRELALMREEVEFLTWDHPMIRNGIDLITSGDI
                     GKSAISLLVNNKLPAGTLLLEALYVVEAQAPKGLNLTRFLPPTPIRVLVDNKGNNIAP
                     QVSFAGLERQLKPVNKQMANKIAKMARADIEKLIKASEKAVEPQVQQVIETAKFEANS
                     KLKAELHRLESLKMVNKNIRADEVEALEQQLNASLAQLETANYRLDSLRVIVSNKA"
     gene            12902..13198
                     /locus_tag="PXE50_000355"
     CDS             12902..13198
                     /locus_tag="PXE50_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HDL5621295.1"
                     /translation="MYIDLQYAVPLLFEYDPNKSQINLAKYGIDFEQAKLLWEDERKV
                     VLEACIEPELRYFLIGKIYDKYWTAFFTPRNDVIRLISVRRSRKKEISYYEKYH"
     gene            13182..13424
                     /locus_tag="PXE50_000356"
     CDS             13182..13424
                     /locus_tag="PXE50_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
                     /protein_id="HDL5621296.1"
                     /translation="MRNTISAEELERIFDEGKEDILQYCDLSTAHRPGQMKRVNVDFP
                     NWMVEALDKQARHLGVPRQALIKMWIAEKLPVQSPR"
     gene            13436..14104
                     /gene="rluA"
                     /locus_tag="PXE50_000357"
     CDS             13436..14104
                     /gene="rluA"
                     /locus_tag="PXE50_000357"
                     /EC_number="5.4.99.28"
                     /EC_number="5.4.99.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA pseudouridine(32) synthase/23S
                     rRNA pseudouridine(746) synthase RluA"
                     /protein_id="HDL5621297.1"
                     /translation="MALIEYNPPLEPFLDEVYRDNHILVINKPSGLLSVPGNRPEYYD
                     SAMTRVQQKYGFTEPAHRLDMATSGILLFALSKAAEKELKRQFREREPKKHYIALLWG
                     KLGEKVGDKGEMNFPLICDWENRPRQKICYERGKKAITHYEVLAHYPNNIARVKLTPI
                     TGRSHQLRVHSLALGHPIIGDKFYANPLAKSLSPRLCLHAESLTITHPITRELMTFTA
                     EPTF"
     gene            complement(14082..14657)
                     /gene="ampD"
                     /locus_tag="PXE50_000358"
     CDS             complement(14082..14657)
                     /gene="ampD"
                     /locus_tag="PXE50_000358"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HDL5621298.1"
                     /translation="MPNLKIEQGCLTGQKQVPSPHFSQRPDQEDISLLVIHYISLPPE
                     EFGGNFIDLFFQGKLEPTAHPYFEEIKDLRVSAHCLINREGEITQYVNFNDIAWHAGV
                     SCFEGREKCNEYSIGIELEGSNNQPFTQAQYQSLANLTKAIQQSYPQITDERITGHCH
                     IAPERKIDPGQYFDWAYYKHLLNEAKKSAQQ"
     gene            14717..15559
                     /locus_tag="PXE50_000359"
     CDS             14717..15559
                     /locus_tag="PXE50_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001300574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HDL5621299.1"
                     /translation="MLSYRHSFHAGNHADVLKHIVQLLILRALKEKEKGFLYLDTHSG
                     VGRYSLLSFESEKTGEYLEGVARLWERDDLPEEVAFYIDELKKLNRGGKLKYYAGSPL
                     LAVQQLREQDRAILTELHPNDFPLLRQEFAKAKNVQTKRENGFQQLKSALPPKERRGF
                     VLIDPPYELKEDYELVVKAIEEGYKRFATGVYAIWYPVVLRQHTKRIVRGLMDTGIRK
                     ILQIELAVRPDSDQRGMTASGMIVINPPWQLETQMKKILPYLTEVLVPEGTGSWKVEW
                     ITPE"
     gene            15682..16323
                     /gene="pyrE"
                     /locus_tag="PXE50_000360"
     CDS             15682..16323
                     /gene="pyrE"
                     /locus_tag="PXE50_000360"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HDL5621300.1"
                     /translation="MQQYKHDFIEFALSRNVLKFGEFTLKSGRISPYFFNAGLFNTGR
                     DLAKLGEYYAKAIQASGIEYDVLFGPAYKGIPIATTVAVALANLFDVDKPCCFNRKEA
                     KDHGEGGNLIGSPLTGKILLVDDVITAGTAIRESMEIINANNAQLAGVLIALNRKEKG
                     KGELSAIQEVERDYGCQVFSIVDFDDLVAFIETSPQYAPYLPKMREYREKYGV"
     gene            16497..17586
                     /locus_tag="PXE50_000361"
                     /pseudo
     CDS             16497..17586
                     /locus_tag="PXE50_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607068.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
     gene            complement(17651..18841)
                     /gene="metC"
                     /locus_tag="PXE50_000362"
     CDS             complement(17651..18841)
                     /gene="metC"
                     /locus_tag="PXE50_000362"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HDL5621301.1"
                     /translation="MSNYKNLSTKLVHTGRKKRNTQGAVNPVIQRASSLVFETLEEKK
                     HATQNRYKGALFYGRRGTLTHFSLQEAMCELEGGAGCYLYPCGAAAVTNAILAFVEQG
                     NHVLMTGAAYEPTQEFCNALLKRMGVSTTYYDPMIGEGLKALVQPNTKVLFLESPSSL
                     TMEVPDIPTLVRVAREINPEIVIMIDNTWSAGVLFPALEYGIDISIQAGTKYLVGHSD
                     VMIGTAVSNARCWDKLREGSYLMGQMVDADSAYITARGLRTLGIRLKQHEQSSIAVAN
                     WLAQRPEVKAVYHPALESCPGHEFFKRDFLGSSGLFSFELCEKLSNDKLANFLEHFEL
                     FSMAYSWGGFESLILANQPEEIAKIRPAIERKLTGTLIRIHVGLEAVEDLIADLEQGF
                     NRIR"
     gene            complement(18900..19439)
                     /gene="dsbB"
                     /locus_tag="PXE50_000363"
     CDS             complement(18900..19439)
                     /gene="dsbB"
                     /locus_tag="PXE50_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein DsbB"
                     /protein_id="HDL5621302.1"
                     /translation="MLYFFKNLSQSRSAWFLLMLSCLILEGTALYFQHGMGLVPCVMC
                     IYERVALFGILFAGILGFLGNRYAIIRYLAILIWLGSAFKGLVLSIKHHDYQVNPSPW
                     NQCEFKVNFPQTLPLDQWLPQVFAPGPVNCSQSQWEMFGFSMAQWLIFTFAVYLIVAV
                     IVLISQFKRSRQRNNFMFR"
     gene            complement(19502..21043)
                     /gene="nhaB"
                     /locus_tag="PXE50_000364"
     CDS             complement(19502..21043)
                     /gene="nhaB"
                     /locus_tag="PXE50_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proton antiporter NhaB"
                     /protein_id="HDL5621303.1"
                     /translation="MSSIDALFKSFLGKSPEWYKLCILAFLIINPLIYFFINPFVAGW
                     FLVAEFIFTLSMALKCYPLQPGGLLAIEAVVIGMTNPHHIKEEIMANFDVILLLMFMV
                     AGIYFMKQLLLYIFTKLLVAIHSKKILSLSFCLSAAFLSAFLDALTVIAVIISVGTGF
                     YGVYHKVASGNNFEDSTDITNDEKIISNKEILEQFRGFLRSLLMHAGIGSALGGVMTM
                     VGEPQNLIIASQAEWGFIEFLLRALPVSLPVLICGIATCFLVEKYKLFGYGDRLPSKV
                     WVVLARYSQLKEQKMTKQDRLKMLVQAIAGIWLIIGLALHLADVGIIGLTIIIICTAF
                     CGITDEHTLGKAFQESMPFTALLIVFFSVVAVIIDLKLFEPIIAFVLSAEPHSQLSLF
                     YIFNGLLSMISDNVFVGTVYINEAKTALDAGIIDREQFDLIAVAINTGTNLPSVATPN
                     GQAAFLFLLTSSFAPLIKLSYGRMVYMALPYTIVLSIVGFLGLEFLLPSMTEVMINWG
                     WFITR"
     gene            21200..21925
                     /gene="fadR"
                     /locus_tag="PXE50_000365"
     CDS             21200..21925
                     /gene="fadR"
                     /locus_tag="PXE50_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid metabolism transcriptional regulator
                     FadR"
                     /protein_id="HDL5621304.1"
                     /translation="MGHSDILKAQSPAALAEEYIVKSIWNNHFPAGSDLPAERELAER
                     IGVTRTTLREVLQRLAREGWLSIQHGKPTRVNDIWETSGPNIIGTIIKLDKSYLPVVI
                     ANVVSLRTRMAEAYIPEAIYLAPEESAKLFDGLDELENTAAAYAEFDYKLFRQFTFLA
                     NKPVYALILNSFKSMYHQVAKIFFADENNRQLTLSFYRSLLCTCLAKDSEKAAACMAK
                     NRQSSGEIWQKLSANIPESFGQL"
     gene            21940..23010
                     /locus_tag="PXE50_000366"
     CDS             21940..23010
                     /locus_tag="PXE50_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HDL5621305.1"
                     /translation="MNEIIFSLEPQDNARLQSLCGAFDEHLALIEKSFNLIIARTGFN
                     FTIQSEDDNHYSATLVQNSVKLIKQLYNETAPIKGKIKELDLEDIHLAIQESRMLLQN
                     QWQAGSQGEIAIKTKRGVIKPRSEHQQAYLRNILSHDISFGIGPAGTGKTFLAVAAAV
                     ESLERQEIRRILLTRPAVEAGEKLGFLPGDLGQKIEPYLRPLYDALFEMLGFEKAQKL
                     MERGVIEIAPLAYMRGRTLNDAFIILDESQNTTTEQMKMFLTRIGFNSKAVITGDITQ
                     VDLPRSQKSGLKHAMEVLKEVPELSFNFFDSKDIVRHPVVAKIVQAYDAWEAVDEERK
                     EQRKLEKLALEQEKILAQAEML"
     gene            complement(23136..25142)
                     /gene="tkt"
                     /locus_tag="PXE50_000367"
     CDS             complement(23136..25142)
                     /gene="tkt"
                     /locus_tag="PXE50_000367"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HDL5621306.1"
                     /translation="MTERKVLANAIRFLSMDAVQKANSGHPGAPMGMADIAEVLWRDF
                     LKHNPTNPKWADRDRFVLSNGHGSMLIYSLLHLTGYDLSIEDLKQFRQLHSKTPGHPE
                     YGYAPGVETTTGPLGQGITNAVGIAIAEKTLAAQFNREGHKIVDHYTYAFLGDGCLME
                     GISHEACSLAGTLGLGKLIAFYDDNNISIDGHVDGWFTDDTAQRFESYGWQVIRNVDG
                     HNPEQIKFAIENAQAETERPTLIICKTIIGYGSPNKSNSHDCHGAPLGDAEIQAAREF
                     LGWEHAPFVIPAEIYTEWDAKAKGTLAEKDWNAKFAAYEAAYPELAAEFKRRYAGELP
                     ANWEAESKAFIEKLQANPATIASRKASQNAIEAYAPILPEFLGGSADLASSNLTLWSG
                     SKPIRAEHNVDGNYINYGVREFGMSAIMNGIALHGGFIPYGATFLMFYEYAHNAVRMA
                     ALMKQRALFVYTHDSIGLGEDGPTHQPVEQTASLRQIPNLETWRPADQVESAVAWKAA
                     VERKDGPTALIFTRQNLAQQQRTAEQLANISRGGYILRECCEKGSCPDLILIATGSEV
                     DLAMKAADVLDAEGVKVRVVSMPSTNVFDKQDEAYRESVLPRSVTKRVAIEAQLADFW
                     YKYVGFDGRIVGMNSFGESAPADQLFKLFGFTVENVVAKAKEIL"
     gene            25505..25717
                     /gene="rpmE"
                     /locus_tag="PXE50_000368"
     CDS             25505..25717
                     /gene="rpmE"
                     /locus_tag="PXE50_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005625828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HDL5621307.1"
                     /translation="MKQGIHPEYKEITATCSCGNVVKTRSTVGKDLNLDVCGNCHPFY
                     TGKQRVVDTGGRVERFNKRFSIPSSK"
     gene            complement(25772..26827)
                     /locus_tag="PXE50_000369"
     CDS             complement(25772..26827)
                     /locus_tag="PXE50_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HDL5621308.1"
                     /translation="MKSLVIKLFGTKKEKKTFKFSKIESVLLKPIGDAIGDAVVHIAH
                     LEQIKKALPNVKIAVLVTSRNKLIFSQANVVDMILEDKVSTYLSQRGHWDLYLDFKPT
                     FTTKSIILDSILKPKFIINFGKKQKSIYNLDTVKNYDFTTVFPKQVHFADYLNYAIFA
                     DFLEKNQVNYNLNIPNELSSFANTLWQEKKIRLLLNPQGSMREISTQELSELLSMIDK
                     RYVQHISCLLTNTTNSAEYLSKIKAPFEISLAPNSDILGYCALVNSADIVIAVDGGGV
                     HISCALGKKLLSFYANHPANIARWYPKPKKDVETFMVIADKWTEDNNDTRGFSLVAPA
                     KWLNHQFAKLIEKYTAC"
     gene            26875..27906
                     /locus_tag="PXE50_000370"
     CDS             26875..27906
                     /locus_tag="PXE50_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HDL5621309.1"
                     /translation="MNIKATLRKARLVIGKAILDSKNTDLILSEIPNKILFLRHDGKI
                     GDYVVSSFVFREIKKQSPQTQIGVVCSQKNRYLFENNPYIDKLYLVKTKSIPDYIRGG
                     KQLAKEQYDVVIDPTVTLRNRDLLFLRTISAKHYVGYQKQKYRLFDLNVEDRKQHFSE
                     IYQDALALIGFENIETQYDVPLNATSNQSIKHYLYENQIRNYIALNLFGAGSARRFSE
                     QKINELLSCLKQHSDKPIVLLTFPEVTAKLCSFTKKYKNIFVYEKTKSVFDSIELIRF
                     ADLLISPDTATVHIASGLSKKIIAFYSSDEQNFIHWHPNNQAETHILRFRKSVNDLDF
                     AAIKPEWLK"
     gene            27908..28798
                     /gene="ilvY"
                     /locus_tag="PXE50_000371"
     CDS             27908..28798
                     /gene="ilvY"
                     /locus_tag="PXE50_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator IlvY"
                     /protein_id="HDL5621310.1"
                     /translation="MDFQSLKLFLDIAQSRSFIRSAEKNYMTASTLTRHIQRIEEELG
                     QPLFLRDNRQVRLTEAGERFLAFAQQGWAEWQQLQNQLSPAQGDLEGELKVFCSVTAS
                     YSHLPPILGKFRQKYPKVDIKLSTGDPALALEQVQSLAADISVAGKPEFLPNNIVFHY
                     IDDIQLSIIAPRVASQATQFLQQSPIDWKNIPFILPVNGPVRKRIDRWFKEQKIKDPI
                     IYATVSGHEAIVPMVALGFGVALLPDIVIKHSPMNNQVSYVNLPSPITPFELGICVQQ
                     KRLQEPIINAFWQLLSDNSA"
     gene            complement(28932..31334)
                     /gene="lon"
                     /locus_tag="PXE50_000372"
     CDS             complement(28932..31334)
                     /gene="lon"
                     /locus_tag="PXE50_000372"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HDL5621311.1"
                     /translation="MAPRKKKAIELPLLPLRDVVVFPYMVMPLFVGREKSIQALRSAM
                     DSNKQLFLVTQQDPNKEEPNAEDMYGVGVIANIIQMLNLPDGTVKVLVEGQTRAKIEQ
                     IHDDENGFWAAIQPIYSEYDDENEELKAIAKTTLTEFENYVKNNKKIPAEIIAKLQKI
                     TLEDRLADTIASNLIAPVKKKQELLEQPNLIARFEALLIAMATEMDTLETETRIRNRV
                     KQQMEKNQRDYYLNEQIKAIQKELGNGDDVEQSELDKLKEKIDAAKLPTEVKDKLNTE
                     FKKLKAMPQSSSEATVVRGYIDWILQMPWHKKSAVKKDLAQAQEILDKDHYGLERVKE
                     RIVEYLAVQSRLNKLKGPILCLVGPPGVGKTSLGQSIANATGRKYVRMALGGVRDEAE
                     IRGHRRTYIGSMPGSLMMKMAKVGVRNPLFLLDEIDKMAQDMRGDPASALLEVLDPEQ
                     NKAFNDHYLEVDYDLSDVMFVATSNSMNIPPALLDRMEVIRLSGYTEDEKMHIARGHL
                     LAKQQENNGLKEGELTIEDSAILSIIRYYTREAGVRSLEREIAKICRKAVKALVLDKK
                     LKSITVSEKNIEEYLGVKRFDYGKMDSQNRIGEVTGLAWTEVGGDLLTIETASVAGKG
                     KFSYTGSLGDVMKESIQAAMVVVRSRAEKLGIAEDFHEKRDIHVHVPDGATPKDGPSA
                     GIAMCTALISSLTGNPVRKEVAMTGEISLRGKVLPIGGLKEKLLAAHRGGITTVIIPK
                     ENEKDLEEIPENAKAALDIHAVETIDEVLALALENPPMGIEILSKAEIKVKKSRAKAT
                     VQ"
     regulatory      31538..31656
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            31832..32929
                     /gene="ribD"
                     /locus_tag="PXE50_000373"
     CDS             31832..32929
                     /gene="ribD"
                     /locus_tag="PXE50_000373"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005708727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HDL5621312.1"
                     /translation="MTDVQYMAYAITLAEKARGWTSPNPLVGCVIVKNGNIIAEGYHQ
                     KAGSWHAERNAILNCEEDLTGATAYVTLEPCCHHGRTPPCSELLIERGIKKVFIGSRD
                     PNPLVSGKGAAQLRAAGIEVVEDFMRTECDALNPIFFHYIQTKRPYVLLKYGMTADGK
                     IATYTGNSKWITGEAARANVQKSRHEYSAIMVGVETVLADDPMLNSRMENAKQPVRIV
                     CDSQLRTPLDSQLVQTARQYRTIIATLNNDAKKQAEYTACGVEILVTGERDKRVDLAD
                     LLQKLGELGIDSLLIEGGSQLNFSVLEQGLVNRVHCYIAPKLIGGKAAKTPIGGKGIG
                     ELAQAVKLRLKSTELLGEDILLDYEVDLLRN"
     gene            33146..33793
                     /gene="ribE"
                     /locus_tag="PXE50_000374"
     CDS             33146..33793
                     /gene="ribE"
                     /locus_tag="PXE50_000374"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HDL5621313.1"
                     /translation="MFTGIIEEVGQIAQIKKQGEFVVVTVKAKKILTDVHLGDSIAVN
                     GVCLTVTSFTQEQFTADVMSETLKRTSLGELSINSSVNLERAMAANGRFGGHIVSGHI
                     DGTGVVAEITPADNSTWYRIKAEPKLMRYIIEKGSITIDGISLTVVDVDAESFRVSII
                     PHTIKETDLGTKKIGSLVNLENDIVGKYIEQFLLKKEPENPQSKITADFLKNAGF"
     gene            33812..35011
                     /locus_tag="PXE50_000375"
     CDS             33812..35011
                     /locus_tag="PXE50_000375"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP
                     cyclohydrolase II"
                     /protein_id="HDL5621314.1"
                     /translation="MFKFSTVEEAIQAIAQGKIILVSDDADRENEGDFICAAEFATPE
                     NINFMAKYGKGLICTPISTEIAKKLNFHPMVLENEDNHQTAFTVSVDHIQTGTGISAF
                     ERSLTCLKMLDENAKPEDFRRPGHVFPLVAKDGGVLVRNGHTEATVDLARLAGLKPAG
                     LCCEIMAEDGTMMQMPELQAFAQAHNMPFITIQQLQEYRRKHDSLVNVVSVVKMPTKY
                     GEFKAHSFVETISGKEHVALVKGDIGDGENVLCRIHSECLTGDAFGSQRCDCGQQFAA
                     AMNQVEQEGRGVVLYLRQEGRGIGLINKLRAYELQDRGMDTVEANLALGFKDDEREYY
                     IAAQMFEKLGVKSIRLLTNNPAKIEGLIEQGLNVVAREPIMVEPNEHDLEYLKVKQHK
                     MRHMFNF"
     gene            35217..35681
                     /locus_tag="PXE50_000376"
     CDS             35217..35681
                     /locus_tag="PXE50_000376"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HDL5621315.1"
                     /translation="MATFQGNYIATGLKFGIVATNWHKIFIDQLLNGATDKLLRHGVE
                     EKNIDTVWVPGALEISIAAKKMAQSGRYDAIICLGAVVRGATSHYDVVVNESAKGISS
                     SALETGVPIINGILTVENLEQAIERSGTKAGNKGEECAMVAIEMANLLKALA"
     gene            complement(35727..37235)
                     /gene="lnt"
                     /locus_tag="PXE50_000377"
     CDS             complement(35727..37235)
                     /gene="lnt"
                     /locus_tag="PXE50_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005611523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HDL5621316.1"
                     /translation="MNFAKNPPFLTACLLAIILGAIGTFAYSPFDIWILAFASAAGLV
                     WSATLANRKTALWATFAWSIGYFCTGVNWVSVSMTQFGGVPTIVSYIAVFLLACYLAI
                     YNLLFSVVSHRLKLNNPFALAAIFTFTEYLRGVVFTGFPWLQFGYSLIDSPFAGIAPI
                     LGVEGLTFLVIVASSYLVKIIQQENKTVPSLMVLAVIFGLSFATRFLQFVQIDTEKQP
                     LVVSLVQGNIEQKMKWDPQHFNHSVRTYEQLILPLLGNSELIILPESAIPALENQISP
                     LLGSLDHLARQHGSEIIIGTLYQNEQEELFNSSVLLGEKEREYALHSNPRYNKHHLVP
                     FGEYVPFGSVLDWMREVFILPINLSQGSFVQPSFLAKNNRFNMAICYEIIFGDQLQQN
                     QKSQNSDYLLTITNDAWFGSSIGPWQHFQMARMRALELGKPLLRAANTGITAIVDANG
                     KVIEQLPQFTADALTATIVPTKGDTPFKQLGHWLIYSFSLFCVIASLLLRRK"
     gene            complement(37294..38193)
                     /gene="corC"
                     /locus_tag="PXE50_000378"
     CDS             complement(37294..38193)
                     /gene="corC"
                     /locus_tag="PXE50_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249295.1"
                     /note="CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter
                     (CNNM) family, and was characterized as belonging to a set
                     of three proteins, at least one of which must be present
                     for CorA to function; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM family magnesium/cobalt transport protein
                     CorC"
                     /protein_id="HDL5621317.1"
                     /translation="MSDEQQSVNTTEKSEKKSILHSLFSGLFQNEPKNREDLVEVIRD
                     SVENELIDSDTKEMIEGVMEISELRVRDIMIPRAQIVFIDANEPLDVCIDLIIESAHS
                     RFPVIRGEKDTIEGILHSKDLLKYLRSDSEPFNLQQVLRPAVIVPESKRLDRMLKEFR
                     SERFHMAVVVDEFGAVSGLVTIEDILEQIVGDIEDEFDEEEVKPIRQLSRHTYAVLPL
                     TDIKKFNEFFATDFNDEEVDTIGGLVMQAFGYFPKRDEQIELNGIDFKVTSANSRQLI
                     QLRVTLSDEQLEKMEKTSPNEEE"
     gene            38331..38939
                     /locus_tag="PXE50_000379"
     CDS             38331..38939
                     /locus_tag="PXE50_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2057 family protein"
                     /protein_id="HDL5621318.1"
                     /translation="MKLTKIALSLTALVVSSMSVAGTLSTSSMVDILAFDGQRVKSGT
                     TSVQMSENKTHQVVVEVGGTVEGDFFTSDQIILTFQGSAENAKLETPRLNSKLDLRKF
                     QENQTVAIKTDSGKVISHKQDFLKGEGFLAKTRVEDNLTKYNLAKKTASVEQFATAPL
                     EAKGQIVVDTNKVSQEELQLLFRKADKDTQKRFLEWAKKNIK"
     gene            complement(39020..39403)
                     /locus_tag="PXE50_000380"
     CDS             complement(39020..39403)
                     /locus_tag="PXE50_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621319.1"
                     /translation="MKTLKLGCIFSLALMLSSCTLTPEQQAERKAKQIRAEQDLQVQL
                     AKQCDVETAELMYQQFNPPLSQTEQEEKAFKKRYAEKVNAPMFQACYKLAWQNYKAQV
                     ELEEIRWNYDRDYMYRGWRYCYYCW"
     gene            complement(39433..40002)
                     /locus_tag="PXE50_000381"
     CDS             complement(39433..40002)
                     /locus_tag="PXE50_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HDL5621320.1"
                     /translation="MNETTINDFSLLCRLFGNLFYRHPTDPILAGTFNWLAQGGLRQV
                     WALNTDSQSENALTLLQKNANPTQLAASYQALFAENGAISPTISAYGLSVNNFVAFRQ
                     ERAMPELENADHIGLLFLTASWIEDNLDSALAQKILFEQFLLPCAGKFLGKIEAFDNG
                     FYKALAQLSRDALSAMADELEESELEAVE"
     gene            40061..40906
                     /gene="nfo"
                     /locus_tag="PXE50_000382"
     CDS             40061..40906
                     /gene="nfo"
                     /locus_tag="PXE50_000382"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HDL5621321.1"
                     /translation="MKYIGAHVSASGGVENAVLRSVEIGANAFALFTKNQRQWQAPAL
                     KAETIEKFKRFCKVHHFSAEQILPHDSYLINLGNPEAEALEKSRVAFIDEMSRANQLG
                     LKLLNFHPGAHLKQISEQDCLARIAESINIAVEKVPNVIAVIENTAGQGSNLGWHFDH
                     LATIIEQVEDKSRVGVCLDTCHLFSAGYDISSYEKSEAVFNDFNQTVGFHYLRGMHLN
                     GSKTPLGSRVDRHHTLREGTIGTEVFAFIMQNMHFNHIPMILETISPEIWADEIKFLR
                     TLELK"
     gene            41034..41606
                     /locus_tag="PXE50_000383"
     CDS             41034..41606
                     /locus_tag="PXE50_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDL5621322.1"
                     /translation="MKKNLFATTFKPVFIASILSVFGGYSSIAVASLSSKPATPNQII
                     ASKAERLAKSSSVFTNRANLPTSSAHTANYSGRINSVYHNWVGTRYRLGGTTKAGIDC
                     SAFVREVMGKAFSKDMPRSTAEQRHVGHSISKSDLRPGDLVFFRKNNHVGVYIGNGKF
                     VHASSSRGVTTSSLSESYWSRNYTQSRRVI"
     gene            complement(41673..42131)
                     /locus_tag="PXE50_000384"
     CDS             complement(41673..42131)
                     /locus_tag="PXE50_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL5621323.1"
                     /translation="MASIRQISDQTAAYQPIPLYRDFNSSRSVKLDLNSLCIKRPRDT
                     FFIHVKNPNLIAWGIELDDLLIVEQTNQYLVNDLLVLEKDGEYKFYQFFNEIQNGEGI
                     AEKILFSLDVSESNLRITDWAEVKIAGVITNVVHQMRTRGAFTQAKQRVA"
     gene            complement(42305..42688)
                     /gene="grcA"
                     /locus_tag="PXE50_000385"
     CDS             complement(42305..42688)
                     /gene="grcA"
                     /locus_tag="PXE50_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autonomous glycyl radical cofactor GrcA"
                     /protein_id="HDL5621324.1"
                     /translation="MIKGVQITESSNSNLLNSFWLLDEAKNEARCLAAKAGFEEDQVV
                     AISELGDIAYREVPVNVAPTIKVEGGQHLNVNVLRRETLEDAIQNPEKYPQLTIRVSG
                     YAVRFNSLTPEQQRDVITRTFTESL"
     gene            42847..43536
                     /gene="ung"
                     /locus_tag="PXE50_000386"
     CDS             42847..43536
                     /gene="ung"
                     /locus_tag="PXE50_000386"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HDL5621325.1"
                     /translation="MKTWTEALGEEKQKAYFQQILQYVHNERLAGKVIYPPQNEVFSA
                     FALTEFSDVKVVILGQDPYHGPNQAHGLAFSVKPPVAPPPSLVNMYKELSEDIEGFQI
                     PPHGYLIDWAKQGVFMLNTSLTVEQGRAGSHSQIGWEIFTDKVIAQLNQHRDNLVFLL
                     WGSHAQRKGQFIDRNRHCVLASPHPSPLSAYRGFFGCKHFSKANNYLISQGISPINWQ
                     LSVDVSYSSTH"
     gene            43552..44472
                     /locus_tag="PXE50_000387"
     CDS             43552..44472
                     /locus_tag="PXE50_000387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH/Band 7/PHB domain protein"
                     /protein_id="HDL5621326.1"
                     /translation="MNFDLPIVSIAFVVLVLVALSSTIKIVPQGYHWTVERFGRYTKT
                     LSPGLNIVVPFIDRIGRKMNMMEQVLDIPSQEVISRDNASVAIDAVCFVQTVDARRAA
                     YEVNHLEQAIVNLTMTNMRTVLGSMDLDDMLSQRDLINGRLLSIVDEATNIWGVKVTR
                     IEIRDVRPPKELVAAMNAQMKAERNKRADILEAEGIRQAEILRAEGEKQSRILKAEGE
                     RQEAFLQAEARERAAEAEAKATQMVSEAIAKGDTTAINYFIAQKYTEALKEIGSSDNS
                     KVVLMPLEAGNLIGSVAGIAEILKSNKTSS"
     gene            44508..44945
                     /locus_tag="PXE50_000388"
     CDS             44508..44945
                     /locus_tag="PXE50_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HDL5621327.1"
                     /translation="MDWFFNWIGWSILGFVLLALELVLPGVFIMWWGFASLILAFIVA
                     LFTLGQALQIALFAIIATIFSLIWWKYQHGKDKKEDQSSSLNSREHAMLGAQGFVVEI
                     LPNGIARGKFGDTTWRVIGNNLQVADKIEVQKVEGITLFVRKQ"
     gene            complement(45086..47890)
                     /locus_tag="PXE50_000389"
     CDS             complement(45086..47890)
                     /locus_tag="PXE50_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HDL5621328.1"
                     /translation="MYKIKHSFNKTLIAISISSFLSIAYATESIENPQPIIQLSESLS
                     SKYSGKGVKLGVMDEGFMVKHPRHSSHLHPLIHQLTTPEGEVRIYDASYPQFEVNPVE
                     KEDGIDLIPSLETHGAGVAGIIAAQADKTLGDGYSGGIAKGAELYVATKSYKRTLEKV
                     IQDAKKELENAKDEEDEKTPSLDQMAKNDLLASKEKEMAIERAEWASGLNKLLDNNVF
                     AINNSWNPFSISDDINVVDKFYQSIKQNKHNPLLQAIMRAKNSNTLLVFAAGNESKKQ
                     PGVMALLPRYFPELEKNLISAVAVDKEQKIASYSNHCGASKNWCVAAPGDLHVLIGVA
                     DEHKKPQYGLTKEQGTSFSAPAITASLAVLKERFDYLTATQIRDTLLTTATDLGEKGV
                     DNVYGWGLINLKKAVNGPTQFLNDETITVTRDDHWSNPLASQFKITKKGDKSLHLDGE
                     NHLDTVAVEEGRLALNGKTKVKTISNHANLAVNGTEVEQNYSSSGQSQLEVLGKSGLI
                     ANAQANIHLAGSLKIDDKLTEKTEAGDVSATVVQLKDKATYQGGFTQLVENENLAKRG
                     LIQDLYFKESEIIAKVNKPLTDEKADTNGQAGLALLNALRTTPIAYRRSWYNGWLQSA
                     LEQRKLDNLHYAVSNNIYADSLELLRSQNAKGLTQAQQHLFTAYHTPLQTTVWAEHLN
                     QKQSASSKHTDVKHHQSQLGVNHKLADKTVLSATLSQQKNRLEKPFAQATLKQTALNI
                     GLRYHLDNAWFSEATLQFARQKYQQSRRFASHQLGTAETRGSTLGGEMRIGYQFMPNQ
                     WIIEPSLGVQWIQTKMNGLNESGELATQTAAMRYRDVNIVPSVKLQRTFQLEQGSISP
                     YIGLNYLHRLNGKITKITSNIAGKTLHSEATTKRNRQLNGEVGVKLHYKNWFTAMNLD
                     YSRVKSANLFGWKVNVGFSF"
BASE COUNT        14066 a         9311 c        10356 g        14160 t
ORIGIN      
        1 ttttagtgag aaattgaata atagcccttt cgttttaatt cgtaaaccga taatttttag
       61 taaggaaata gatttaatga aacaaattcc tatgacggtg cgtggtgcag agcaactgcg
      121 tgaagaattg gattttttaa aaaatgtgcg tcgcccacaa attattgatg cgattgcaga
      181 agcccgtgaa cacggtgatt taaaagagaa cgcggagtat cacgcagccc gtgaacaaca
      241 aggtttctgt gaggggcgta ttcaagaaat tgaaggcaaa ttaggcaatg ctcaaattat
      301 tgacgtcact aaaatggcaa acaacggcaa agtgattttt ggggcaacgg tgcagttagt
      361 gaatgctgat acagatgaag aagtcactta ccgcattgtg ggtgatgatg aagccaatat
      421 taaagagggc ttaatttcag ttaattcccc gattgctcgt ggtttaatcg gcaaagaggt
      481 ggacgattca gtcagcatta ccacaccggg tggcaaagtt gagtttgaca ttgttggcgt
      541 agaatatatt taatctacgc tagggcgaat tacaatagtg gggcgaaaaa attttcgccc
      601 ctactttatt aaacaatctc actcggtaca aagaagtagg caatttcacg ttttgccgac
      661 tcttcggaat ctgaaccgtg taccgaattt tcacgcatac ttaaggcata taaatcgcga
      721 atggtgcctt tttcacggtt atccggattg gttgccccca ttaatgcacg ataatggcta
      781 attgcatttt ccccttccag tacagaaacg acaatagatc ctgatgtcat aaattccact
      841 aacggctcaa agaaatcttt gcctttgtgt tccgcataaa atccttccgc ttgctcacgg
      901 gtaagatgta ctttttttag agctttgata gtcagcccgt tttcttccaa ttgagccaaa
      961 attttgccga ttaaattacg gcgtgtagca tccggcttaa taatagaaag cgtttgttga
     1021 atcatcatct tctcctattt aacttgcatt cccggctgaa caccgctgtc tgcatctaat
     1081 aagaacaggt tcgcaccgcc tgtgccggca gataaaatca ttccctccga cataccgaac
     1141 gacattttgc gtggagcaag gttggcaatt acaatcacaa aacgcccgat aagtgcttcc
     1201 ggatttgggt aggccgcctt aatgcctgag aatacttggc gttggtggtc gcctaaatcc
     1261 agctcaaaac gtaacatttt gtctgatttt ggcacagcct cgcagttcaa tactttggct
     1321 gcacgtaaat ctaatttcgc gaaatcatca atcgtaattt cagggctgat tggctcaact
     1381 gcaatatttt cttgtttttc gaccgcttgt tgttccactt tttgtgttcc tttggtttgg
     1441 ttttcggttt tcttattcgc ttcggcaaat aaggctttgg tttcatcaat cactgcatca
     1501 atctgttttt tctcaaggcg tgagaatagc gatttaaacg gtgccacggt atgcccgaat
     1561 aatggggtag cgatattatc ccaacgcaat tcgctttgta agaatgcttc ggcacgttct
     1621 gccagttttg gtaacaccgg ttttaggtag ctcatcagca cacggaataa ctcaatgccc
     1681 attgaacaaa ccgcttgtaa ttcagcctct ttgccttctt ctttggcgat gacccaaggg
     1741 gctttgtcgt caatgtattt attggcttta tcggttaatt ccataatggc acgaatagct
     1801 ttattaaatt cacggttttc atagaaattc gctatggttt ctgcttgagc ggtaaattca
     1861 ttaaataacg cttcgtcatc taatttttca gctaatttgc cctcaaagcg tttagcgata
     1921 aaactggcgt tgcgagaagc aagattcact aatttgttta cgatatcgct gtttacacgt
     1981 tgcacgaagt cgtctaaatt aaaatctaaa tcttcaatgc gatcgtttaa ttttgccgca
     2041 tagtaatagc gtaagcattc cggatcgaga tgttttaaat aggtgttggc ttgaatgaat
     2101 gtaccacgag atttcgacat tttcgccccg tccactgtca cataaccgtg agcaaacaca
     2161 ttggtcggtt tgcggtagcc gctgccttcc aacattgccg gccaaaacag gctgtggaag
     2221 taaacaatgt ctttaccgat gaagtgataa agctcggtgg tggaatcttt ttgccaaaac
     2281 tcatcaaaat caatgcctgc acggtcgcat aaatttttaa acgatgctat ataaccaata
     2341 ggggcatcta accaaacgta gaagaatttg ttttctgcgt ccggaatttc aaaaccgaaa
     2401 taaggggcat cacggctgat gtcccattgc tgtaaaccac tttcaaacca ttcttgcatt
     2461 ttattggcaa tttcaggttg gagtgagccg gaacgagtcc actctttcaa cattccctca
     2521 aagcttggca ggtcaaaaaa gaaatgttct gattctttta ccaccggagt tgcaccggaa
     2581 actgccgagc gagggttgat taaatccatc gggctatagg tagaggcaca tacttcacag
     2641 ttatcgccat attgatcttc ggctttacat ttcgggcagg tccctttcac aaagcgatcc
     2701 ggcaagaaca tatttttttc tgggtcgaac agttgtgaaa tcactttgct tttaataaaa
     2761 ccgttcgctt ttaaggtttt ataaatatcg gtagtgattt ggcggttctc ttcgctgtgg
     2821 gtggaatggt aattatcaaa gctgatatta aaactggcaa aatccgcttc gtgatcggct
     2881 ttggcttttt cgattaactg ctcaggggta atgcctaatt tatcggcatt aagcataata
     2941 ggcgtgccgt gggcatcatc agcacagaca aagtggactt cattgccacg catacgttga
     3001 aaacgcaccc aaatatctgc ttgaatatgt tcaagcatat gacctaaatg aattgcaccg
     3061 ttagcatagg gcaaggcaca agtaacaagc atttttcgtt tttggttagc cattcttttt
     3121 ctcattaaaa ttagggtaaa aattgccgtc tattttagcc caaaagtggc aggtttacca
     3181 gttggcgtga atttattaga gctttgggct aacaagcggt agaatatgat gcgctagagg
     3241 cgaaacattt ttcgcctcaa tttcccaaat gatgatgtgg gcgaaagatg tttcgcctct
     3301 aaacctattt tggataaaaa tagtatgcga caagtaaagt tataccgcta ccaactcccc
     3361 attcaaaccg gtgtagtgtt acgcaagcaa cctttgaaag aaaggcaagg ggtgttggtg
     3421 tgtttgcaag aacaggagaa agtcggctgg ggcgaaattg caccgcttcc aagttttagc
     3481 caagagagcc tagaacaagc tgaaaaccaa gctgtgaatt ggttaaaggc gtggcagaaa
     3541 ggagagcctg aaacgttaga gcagcttttc ccgtctgttg cctttgggct aagctgtgcg
     3601 ttggctgaac tgaataatga attaggcgag caagcgaata accaatcggc ggtgctgtgc
     3661 tatggcgatt tggaaaagtt acacacggca tttagccaac atacgaaccc aatcggtaaa
     3721 attaaaatcg gtctcaatcc tgaacaggaa ggcgagcagg caaatttgct gttgcatact
     3781 tttccgaatt tacgcctaag gcttgatgcc aaccgtcttt ggagcttgga acaagcggtc
     3841 aaatttgctg aaaaaattgc aaatgaacat aaaccccgta ttcaatttat cgaagaacct
     3901 tgccaagcgc tcgaactttc ccgccaattt gccacacaaa ccgacattgc gattgcgtgg
     3961 gacgaaaccg tgagagaggc gaattttttg gtaaaaaaag agccaaattt gaccgctatt
     4021 atcattaaac ctacgctggt tggttcgctt gaaaaatgcg tgaatttaat tcaacaagca
     4081 cagaagcaag gattagtagc ggtgattagt tcaagtcttg agagcagttt gggcttaacc
     4141 caactggctc gtatcgccca acaatacacc ccaaacagtg tgccggggtt ggatacgtta
     4201 aatttaatgc aacaccaatt attgcgagat tggcacgact ctagcttgcc gttggtcggg
     4261 ctagaaagcg aatttgttag ggaagttgtg gtataatctc ccaattaaac actctctccc
     4321 cttgtgggag agagaccgct tatgagcgtt cagcgaaata agcagagaga ggggaagcgg
     4381 tcatttttct aaaaaagttt gcacatttcc cctctccctg atttttcttc tggacgaaga
     4441 cgtatttccc ccctctccct gatttttctt ctagacgaag aaaaatctgt ccctctccca
     4501 cgaggggaga gggtaaagta atttatggta taaaaatagt atgcgtttag acaaatttat
     4561 cgccgaaaat accggtttga cccgttcaca agcggctaaa gtgctgaaaa gtggtgtggt
     4621 gacggtaaac ggcaatattg aaaaaagtgg tgcggcaaaa atcagtcaag aagatgaaat
     4681 ttattacgaa gatcagaaat tagagtgggt ggaagagggg cagtatttta tgctctataa
     4741 gccacagggc tatatttgtt cacacgatga tggtgagtac ccaacggtgt ttcaattctt
     4801 tgattatccg ttaatgacta aattgcatac cgcagggcgg ttagatgtgg ataccacagg
     4861 gctggtgctg ttaaccgatg acggcaaatg gtcgcaccgt attacctcgc ccaagcacca
     4921 ttgtgaaaag acatacttag tgacgcttgc tgatccggtg gaagattttt atgcacagcg
     4981 attggcagaa ggaattttat tgcgtggcga gaaagagcca accttgccgg ctcaacttga
     5041 aattttagac gattacaatg tgaatttaac tattagtgag gggcgttatc atcaagttaa
     5101 gcgaatgttt gccgcccttg ggaataaagt cgaggcattg caccgctggc gaattggcga
     5161 tgtggtgtta gatgaaaggt tggaagaagg tgaattccgc tcgctcactt cagaggagat
     5221 agccagtttt aatggaaagt agaagaccaa gcctgagctt tttcatcata ttaggtatga
     5281 tggcaatgtt gccaccatta gccattgata tgtatttgcc ctcattttta gacattgccc
     5341 gtgacttggc ggtttcgcaa gaaaaagtgc aaaccacctt ggcggtattt accctaggtt
     5401 ttggggcagg gcaactattc tggggaccga tggcagacag ctttgggcgg aaaatcatta
     5461 ttttaatcgg attagtcggc tcggcgattg ccgcttattt tctgacccaa gttcagaata
     5521 ttgaaacatt ttacctgcta aggttagtac agggcttatg tgcggcagcc ccggcggtgg
     5581 tgctgggagc attagtgaga gatctgtttg agcgtaattt atttgccaaa ttgatgtcgg
     5641 ttattatgat tatttctatg cttgccccat tgcttgcacc gattgttggc ggttatattg
     5701 ccaaatattt ccactggcac tcaattttct atgtgttagt ggcgatgggg attttgtgcg
     5761 tggtattaat tagttggaaa atccctgaaa cattagcccc cgaaaaacgc ctgccgttaa
     5821 gttttggcaa aactttaagc aattttgcca tcttactgaa acataggcct actcttggtt
     5881 atgtgctgat tggcggctta acctttgcag gtattttctg ttttttaacc tcaggctcga
     5941 ttgtctatat tgggctttat ggcgtgtcgc aagaaaattt cggctatttc ttcgggctga
     6001 atatgattgt gatggtgacg atgacggcga ttaacagcaa aatggtagtg aaagtcggct
     6061 ctgaaacgat gttacgaatt gctttagcta tgcaactgtt agccggcatt tggctggctt
     6121 tagtggcgat ttttgattta ggcttctggg caatggcaat cggtattccg ctttatatcg
     6181 gaatgctttc caccattggt agtaatgcca gtgccgccat tttagagcaa tttccacaaa
     6241 tggcaggcac ggctaacgga gtagcaggta cggctcgttt tggtgttgct tcccttgttg
     6301 gagcagggct ttcacatatt gctgtaacca gtgctgcccc aatgcttttg gcgatggcat
     6361 tgtgcgttat gttagccggt gtggtgtatt attttctgtg ttataagcga taactaggtt
     6421 ggggttagct tgcgaaaacc caacaaattt ctacaagcgg ttaataatag tacatttttt
     6481 gcaaattttt aggcagaatt aaccgcttgt gtggtacgag cgtggacgct cgcaccatcg
     6541 gggcaatatc tactaagatt ttaaaaacag cgaaatagat tccaaatgcc cggtgtgggg
     6601 gaacatatca atcattgccg ctttttctag cctgtagcct agttgcaaca gtttttcggc
     6661 atctcgcacc agtgttgccg gattgcaaga gacataaaca atccgctcag gattgagtga
     6721 tgtcaagtga tctaggcaaa atagtgctcc gttgcgtgcc gggtcgagta gtaccttgtt
     6781 aaacggctct tttgcccaag gtttgtcaga aaacggctca tctaaattgg tttggtaaaa
     6841 ttccacattt tttagaccgc ttgtcaccgc attctctcgg gcttgttgca ccattggttc
     6901 taccccttcc acaccgacca ccgatttcgc tcgctcagca ataggcaagg taaaattccc
     6961 cattccacag aagagatcta acactcgatc ttggttggat aattccagcc actcaagggc
     7021 tttttccacc attttttcat tgagcgtggc attcacctga ataaaatccc gaattgaaaa
     7081 atgcaacttt agaccctgaa tttgataata cgggcgttca ccgcacagat gctcaatgtg
     7141 attttcgcta gtcatcacaa aaagagataa ttgctcttgt gtggcgaatt gacgcaaatt
     7201 gtggttatct tgcgccgata atgcccctaa atggcggaaa aatagggcaa tggtattgtc
     7261 cgcactgacc agctcaatat gccccaattt tttcggctgt tgccagtttt caatcaggtg
     7321 ttttaatttt gggagcaaat tggcaagcgg ttcaaccagc acttcacagt gtgcaagcgg
     7381 tataatttgg ttggaatttt gcaaacgaaa gccgattacc gccttgcctt gctggatcgc
     7441 aatgcttaat tttgcccgac ggcggtagtg tttatcgttg ccgataatca tcggctgaac
     7501 atcaatagcg tgggtttgca atttctgtaa gcgttggaat aaagcctgtt gttttgcctt
     7561 acgttgcagt tcaagcgaaa tatgctgcat ttggcagcca ccgcattgcc cgtaaagttc
     7621 gcagcttggc attcgccgat ttgcagattt tttaagaatt ttaaccgctt gtccacgtcc
     7681 gtattggcgt ttctcttcca acactttaaa ttccacctgc tcatcaggca gggcattttc
     7741 gataaaccaa gttttgccgt tgattttggc aatccctaag ccttgataat ctaacgattg
     7801 aatagttgcc ttttgacaag cgggtgattt tatcggtttt tttgccgatt tttcagaata
     7861 aaaaatagcc attgttttca gatgaattgt tatgatataa agtgtcgaaa tggggagatt
     7921 atataagaaa agcagttggc ggaaaatgga ggcaatatga tttcatcggt ttggaatgaa
     7981 cgttatttgg cggataaaaa acgggaacaa gatcaccgct cgccttttca gcgggatcgg
     8041 gcaaggttat tgcattcgga ggcttttcgc tgtttgcagg cgaaaacgca aattcacgcc
     8101 gtgggggaag atgattttta tcgaacccgt ttaacccatt cgttggaagt ggctcaaatc
     8161 ggtagcagtt tgcgagaaaa attattagcg gatgtggaag gctttcaagc ggtctgttcg
     8221 gagcaggaat ttgcaaaaaa tatggcaaat ctgaccgctt tattgccgga tcatagcttg
     8281 gtggaatccc tttgttttgc ccacgatctc gggcaccctc cgttcgggca cggtggtgaa
     8341 atggcgttaa attataaaat gtacgccttt ggcggcttcg agggtaatgc tcaatccttt
     8401 cggattatga cccagcttga gccttacacc gaaacagccg gaatgaatct gacccgtcgc
     8461 accttactgg gggtaatgaa atatccggca ctcttgtctc aaacctcgcc gattgagccg
     8521 gcagaaatga gcgaggctcg gcatattaat ttgcaccatt ttccacagag caaagggatt
     8581 tttgatgaca acaaccactt ttttgagtgg gtattagccc cgttaagtga aaaagaccga
     8641 cgccaatttt gcacggttca gcccaatcaa gatccgaaac agccaaacaa aacgcaatat
     8701 aaatctctcg attgcagcat aatggaacta gcggacgata ttgcctatgg cgtacacgat
     8761 ttggaagatg cgattgtagg tggaatggtc acaccgcaat cgtggcaaaa tgcggaaaaa
     8821 ttgctggcgg agtgccaatc cgattgggtg aaacaacgcc tgccggagat tcgggaaaag
     8881 ctcttttctc agcaccgcta cgagcgaaaa gatgtgatcg gggcattagt gaatcatttt
     8941 attaccaatg tgcgttggaa agctctgcct gaatttgacg agccgttgct acgttataat
     9001 gcctatttac cggaaagtgt tgcctgtgtg ctgaaaatct tgaaagattt tgtgtatcaa
     9061 tatgtgattt gtgatgccaa aacccagcgg gtggaacgca aggggcaacg cattctaatg
     9121 gaattgttcg atattttaag cagtgatccg atgcgattac tccctaataa tgtgcgggaa
     9181 cgttggaaaa atgcggaaga atctaagcgt gcaagggtaa tttgcgacta tttagccggt
     9241 atgtctgatg ggcaggcgtt taaacttttt gaaagtttat aatgaacttt gttaattttg
     9301 caaggtctca gtaataggtt tcatttattt aataggagat ttcaatgaaa actgtttcta
     9361 aaggtctttt agtattagca actttggctt ctgcaacagc atttgcggtt tcttccaagt
     9421 gaaatttatc agcctcgtgg cgaattagtt aaagcagatc gtcaaggtaa tggtgagttt
     9481 gaagtagaat atcgtgtcag tggtaatgat gttcgtggct tagcgaaaag tgcgatcgcc
     9541 cacgctaaac gtaaaggttt ccatttagta gaatctgata ttcatagaga tgatgctgat
     9601 ttaaaattca aacgtggtga ccaagagctg gatattgaaa ttgaagtaaa aggtagaaat
     9661 cggattgaat ataaggcaga tctagattta gataaaaact aaatttaccc cttaaaacga
     9721 ccgcttgtgt gatttaaccg cacaagcggt ctttttattg tgcttttttg caaaaatact
     9781 caagccgacc ggtcccggaa tttggtaaaa tagccgttta aatgacaata atgatgcttt
     9841 tacttattac ttagaggaaa aaatgttttt agtcggtcag cgttggctaa gtgaatcgga
     9901 aaataattta ggtttgggaa tcgtgacttc ggtggatcat cgcactgtca ctatcaattt
     9961 cccggcagcg gaagaagagc gggtctatgc aattgcagtt gcacctttaa ctcgagtgca
    10021 gtttcaagcc ggagatagaa ttaacagtat agatggctgg cagttagagg tttcagaggt
    10081 tgtggaaaat caaggtgccg taatctattt gggcaaaagg gtggataacg gtgaagaagc
    10141 ggtactgcct gaaatgttgc tcgatcataa aatcagtttc agcaaaccgc aagaccgcct
    10201 tttttcggct cagattgatc gctcagatcg ctttgcatta cgctttaacg ctttgcagca
    10261 ccagcaagcg caatatcagt cgccactgcg tggtttgcga ggcattcgag ccagcctgat
    10321 tccacatcaa ttacatattg caaaagaagt cgggcaacgc cttgctcctc gtgtgctatt
    10381 agccgatgaa gtgggactgg gtaaaactat tgaagctggt atgattttgc aacaacagct
    10441 attttcgggc agagcagaac gagtattggt attagtgccg gaaagtttgc aacaccaatg
    10501 gttggtggaa atgcttcgcc gttttaatct gaaattctcg ttattcgatg aagaacgttg
    10561 tagtgatttt gataaacaag atgaaaatgg cgatgatgta agtgaaaatc catttgagag
    10621 cgaagcgtta gtcattactt cactaaactg gctggaaacc tcaccgcaac gagccaatca
    10681 agtgcttgct gccgactggg atctattaat tgttgatgaa gctcaccatt tagaatggtc
    10741 ggaaaccgaa tcttctatcg gctatcagtt ggtagagcgt ttatctcaac aaattcctgc
    10801 cgtcttgctt ttaacggcaa caccggagca attagggcaa gagagccatt ttgcccgctt
    10861 ggcgttgtta gattcggatc gtttttatga ttatgccgag tttgtacagg agcaagcaca
    10921 gtataaaccg gtggcagatg cggtgagtag cttattaagc gataaaccgc taagtaatga
    10981 cgagcagaat gcgattgcgg agctgttaag cgagcaagat accgagccga tgttccgtgc
    11041 aattaatagc aaaaaatcgg acgaaaatga ccgcttgcaa gcccgtcaag agctgattag
    11101 tgagctaatt gaccgccatg gaaccagccg ggtgttgttt agaaataccc gtcagggagt
    11161 gaaaggcttc ccacatcggg aataccacca aatcagccta gaaatgccga aacaatacca
    11221 aaatgcgtta aaagtgatgg gaatgatggg gagtgtgagc caaagtgatt tgctctatcc
    11281 tgaatatttg ttccaacgaa tgaacccgaa tgcgaaatgg gctgaattcg accctcggat
    11341 tgattggctc atcactttct taaaaaatca tcgtgatgaa aaagtgctgg tgatctgcaa
    11401 acaggcggac actgcgattg ctttggagca agttttgcgt gagcgtgagg cgattcgttc
    11461 tgccgttttc cacgagaaaa tgtcgattgt tgaacgtgac aaagctgccg cctattttgc
    11521 tcaacaagaa gaaggcgctc aggtgctgat tagttcaagc atcggttcag aagggcgaaa
    11581 tttccaattt gctaaagatt tagtgctgtt taatttgccg gataacccgg atttattgga
    11641 gcaaagtatt gggcgattag atcgtatcgg acagaaaaat gacattcaga tttatgtgcc
    11701 ttgctttaat ttatcggctc aacagatgtt ggcagagtgg tatcacaagg gcttgaatgc
    11761 gtttgaagaa acctgcccga tgggaacagc gatcttccgt gaattaggtg aagaattgca
    11821 acaattcctg caaaaacctg aactttcagc ccaatttgat gattttgttg cgaaaaccta
    11881 taaacgccaa cagtatttga aagccgaact ggagaaagga caggacagat tattagaact
    11941 gaattctaat ggcggagaag cagctcaaca gctcgctaat gatattgcga aagaagataa
    12001 taatccgcag ttggttaatt ttgccttgag tttgtttgat gtgattggcg ttgaacagga
    12061 agatttaggc gagcagagca ttgtgattag cccaaccgga catatgcttg tgcctgattt
    12121 cccggggcta tcggaagatg gcacgaccat tacctttaat cgtgaactgg cgttaatgcg
    12181 ggaagaggtg gaatttctca cttgggatca cccgatgatc cgcaatggta ttgatttaat
    12241 cacctccggc gatattggca aatcagcaat ctcattgctg gtgaataata aattgcctgc
    12301 cggtacatta ttacttgagg cgctttatgt ggtggaagca caagcaccga aagggctaaa
    12361 tttaacccgt ttcctaccgc caaccccgat tcgggtttta gtggataaca aaggcaacaa
    12421 tattgctccg caggtctctt ttgccgggct tgaacgccaa ttaaaaccgg tgaataaaca
    12481 gatggcaaat aaaattgcca aaatggctcg agcggatatt gaaaaattaa ttaaagcgag
    12541 tgaaaaagcg gtagaacctc aggtccaaca ggtgattgaa actgccaaat ttgaggcaaa
    12601 tagcaaatta aaagcagaat tacaccgctt ggaatcactc aaaatggtga ataaaaatat
    12661 tcgagccgat gaagttgaag ccttagaaca acagcttaac gcttcccttg cccaacttga
    12721 aacggcaaat tatcgcttag atagcttgcg agtgattgta agtaataaag cgtaattttt
    12781 tgcaagtacg aaaagtgatt ttttcgatct gtgtcgaaaa aatcactttt ctattttgtg
    12841 tcatccttgc agattattta tgctattcct catattgtaa aaggtataaa aaaggaatat
    12901 tatgtatata gatttgcaat atgctgtgcc gttattgttt gaatacgacc cgaacaaaag
    12961 ccaaattaat ttagccaaat atggtattga ttttgaacag gcaaagttgc tttgggaaga
    13021 tgaacgaaaa gttgtactgg aggcttgcat tgaacccgaa ttacgctatt tcctgattgg
    13081 caagatttat gataaatatt ggacagcgtt ttttacacca agaaatgatg ttattcgttt
    13141 aatttcagtt agacgttccc gtaaaaaaga gatctcatac tatgagaaat accattagtg
    13201 ccgaagaatt agaacgtatc ttcgatgaag gcaaagaaga tattttacaa tactgcgatc
    13261 tttctaccgc tcatcgcccg gggcaaatga aaagggtgaa tgttgatttc ccaaattgga
    13321 tggtagaagc gttagataag caagccagac atttaggtgt gcctcgccaa gccttgatta
    13381 aaatgtggat tgcggaaaaa ttaccggttc aatcacctag gtaagcgagt ggcaaatggc
    13441 attaattgaa tataaccctc cattagaacc atttttagat gaggtttatc gggataacca
    13501 tattttagta attaataagc ctagtggttt attatcggtg ccgggcaatc gtcccgaata
    13561 ttacgacagt gcaatgactc gagtacagca aaaatatggc tttaccgaac cggctcatcg
    13621 tttggatatg gcaacaagcg gtattctttt gttcgcccta agcaaagcgg cggaaaaaga
    13681 actaaaacgc caatttcggg aacgtgaacc gaaaaaacac tatattgcgt tactttgggg
    13741 caaattaggt gaaaaagttg gggataaggg cgaaatgaat tttccgctga tttgcgattg
    13801 ggaaaatcgc ccccgccaga aaatttgcta tgaacgaggc aaaaaagcca ttacccatta
    13861 tgaagtgtta gctcattatc cgaataatat agcgagagta aaactcacgc ctatcacggg
    13921 gcgttcgcat cagctacgag tacatagcct tgcgttaggt cacccgatta ttggcgataa
    13981 gttttatgct aatccgctgg caaaaagttt atcgccccgt ttatgtttgc acgcggagtc
    14041 actaacaatt actcacccga ttacaaggga gttgatgacg tttactgctg agccgacttt
    14101 ttagcctcgt tcagtaggtg tttgtaatat gcccaatcaa aatattgccc cgggtcgatt
    14161 ttccgttccg gggcaatatg gcaatgcccg gtgatgcgtt catcggtaat ttgtggatag
    14221 ctttgctgaa tggctttggt caaatttgcc aaagattggt attgagcttg agtaaacggc
    14281 tgattattac tgccttccag ttcaatgcca atcgaatatt cattgcattt ctcccgccct
    14341 tcaaaacaag agacgccggc gtgccacgct atatcgttaa aattcacata ttgcgtgatt
    14401 tccccctccc tattaatcaa acaatgggcg gaaacccgta gatctttgat ttcttcaaaa
    14461 taagggtgag cggttggttc gagtttacct tggaaaaaca gatcgataaa atttccacca
    14521 aattcttccg gcggtaagct gatgtagtga ataaccaaca aggaaatatc ctcttgatca
    14581 ggacgttggc taaaatgcgg agacggcact tgtttttgac cggttaaaca gccctgttcg
    14641 atttttaaat ttggcatagt ctaaataggg tgaatacgtt aaaatatggc tcattttact
    14701 agaaaaagag aagaatatgt taagttatcg ccacagtttc cacgcaggca accacgctga
    14761 tgtgctaaaa cacattgtcc agcttttgat cttgcgagca ttaaaagaaa aagaaaaagg
    14821 ttttttatat cttgatactc actccggtgt ggggcgttat agtctgttaa gttttgaatc
    14881 ggaaaaaaca ggcgaatatt tagagggcgt tgcccgttta tgggagcgtg atgatttacc
    14941 ggaagaagtg gcattctata ttgatgagct gaaaaaatta aaccgtggcg gcaagttaaa
    15001 gtattacgca ggctccccat tattggcggt acagcaactg cgtgagcaag accgagccat
    15061 tcttaccgaa cttcacccca atgattttcc gctgttacga caagaatttg ccaaagcgaa
    15121 aaatgtgcaa accaagcgag aaaatggctt tcaacaatta aaatccgccc tgccgcctaa
    15181 agagcgtcga ggttttgtgt tgattgatcc accttatgaa ttaaaagaag attatgaatt
    15241 ggtggttaaa gcgatagaag agggctacaa acggtttgcc actggtgtgt atgccatttg
    15301 gtatccggtg gtgcttcgcc aacataccaa acgtatagtg cgaggtttaa tggataccgg
    15361 cattcgcaaa attctacaaa ttgagcttgc cgttcgtcct gatagcgacc aacgtggaat
    15421 gacggcaagt ggtatgattg tgatcaaccc accgtggcag cttgaaaccc agatgaaaaa
    15481 aatcctgcca tatttaaccg aggtgcttgt gccggaagga acaggttctt ggaaggtgga
    15541 gtggattacg cctgagtaaa ttaaatacgg atagcacaag cgtggacgct tgcgccatca
    15601 taaattctga tttgcaatat tttttagaaa aataaccgct tgtcttatca agaagtgggg
    15661 gaaatataaa aggaaaaaac gatgcaacaa tacaaacacg actttattga atttgcctta
    15721 agccgcaatg tgctgaaatt tggcgaattt accttaaaat caggcagaat cagcccctat
    15781 tttttcaatg ctgggctttt taacaccggg cgcgatttag ccaaattagg cgaatattac
    15841 gccaaagcca ttcaagccag cggcattgag tatgatgtgt tattcgggcc ggcttataaa
    15901 ggcattccga ttgcaaccac ggttgccgtg gcactagcca acctgttcga tgtggataaa
    15961 ccttgttgct ttaaccgcaa agaggcaaaa gatcacggtg aaggcggtaa tttaatcggt
    16021 tctcccttaa cgggcaagat tttgctggtg gacgatgtga ttaccgcagg cacggcaatt
    16081 cgtgagtcga tggaaattat caatgccaat aatgcccagc ttgccggtgt gctgattgcg
    16141 ttaaaccgta aagagaaagg caagggcgag ttgtctgcga ttcaagaagt cgaacgtgat
    16201 tacggttgcc aagttttctc gattgtggat tttgatgatt tggtagcatt tattgaaacg
    16261 tcgccacaat acgctcctta tttgccgaaa atgcgtgaat atcgtgaaaa atacggtgtt
    16321 taacttttgc aaaaaaacag caaaaactca ccgcttgtca ctctctaatc tcaccattat
    16381 gaatcacttt catcttttgg tgagattttt tcaattaaaa agccgataaa ttgattgtga
    16441 gctttagcta attggcttag gataaactcc tgtaatacag gagttggaga actaaaatgg
    16501 cacatcaaaa attacctttt cacgcagaca ccgttggctc atatttgcgt tccgatgctt
    16561 ggaaaaaagc tcacgcagac tataaagcag gcaacatttc cctcgaacaa cgtgatgaaa
    16621 ttgtagaagc ggaagtgaaa aaattagtac aagcatcaat tagatgcggg cattcaagtt
    16681 gttacagacg gcgaatatca ccgctcttgg tggcatattg atttcttgga aaatctgaac
    16741 ggcattgaag gctatgtgcc ggaaaaagcc tatgcgttta aaggggttga ggttcgccct
    16801 tataatacac gttgttgcgg taaagtgtct tggaatccga atcacccttt tattgagcat
    16861 ttcaaaaaat tcaatgcgat tgtaggtggt cgtgcggtgg cgaaatttac cattccaagt
    16921 ccaaaccaat taatgtaccc gattcagtgg gatcacggca tttacccaaa ccgtgaggaa
    16981 tttgccaaag atgtgcaaca ggcttataaa gaggcgatta aagcgttcta tgatgccggc
    17041 tgtcgttatt tgcaaattga tgatgtctat tggggggcgt tgtgtaataa cgttggtcaa
    17101 ccgacatttg aagccgataa agctcaagcg gtggcgaata ttcaagccat tcttgccgat
    17161 aagccggaag atttaaccat taccacccac gtttgccgag gcaactataa atcttcttat
    17221 ttattgacag gggcttatga tccgattgcc gacggcttat ttgctcaaac caactatgat
    17281 gggtatttct tagaatatga tgacgagcgt tcaggcggtt ttgagccgtt aaaacatttt
    17341 gccaacaaca aagggcgtgt ggtattgggc ttaattagtt caaaattccc tgaattggaa
    17401 gataaggaag cggttaaagc ccgtattcaa gaagcggcaa aatatgtgcc gttagagcag
    17461 ctttgcctaa gcccgcaatg tggttttgcc tcaaccgaag agggcaatat tatgtcggaa
    17521 gcacagcaat gggcgaaagt tcgtcttgtg gaggaaatcg cccaagaagt ttggggcgaa
    17581 gattaattag agtgaaaaat gcccgtaaca agcgggcatt ttttgtgaat tttttgcaaa
    17641 ttcaagccat ttagcgaatg cggttaaaac cttgttctaa atcggcaatc aaatcttcca
    17701 ccgcttccaa gccaacgtga atgcgaatta atgttcccgt cagtttgcgt tcaatcgccg
    17761 ggcggatttt ggcaatttct tccggctgat tggcaagaat cagcgattca aacccacccc
    17821 aagaatacgc cattgaaaac agttcaaaat gctctaggaa gttggctaat ttgtcattcg
    17881 agagcttttc gcaaagttca aatgaaaata gaccgcttga acctaaaaaa tcccgcttaa
    17941 aaaattcgtg ccccgggcag ctttccaacg ccgggtgata aactgctttc acttcagggc
    18001 gttgagccag ccagttagct accgcaatgc tactttgttc gtgctgtttt aagcgaatgc
    18061 ctaaggtgcg tagcccccga gcggtgatgt aagcggaatc agcatccacc atttgcccca
    18121 ttaaataaga gccttcacgc agtttatccc aacaacgggc gttagaaacc gcagtaccga
    18181 tcatcacatc agaatgcccg actaaatatt tagtgccggc ttgaatggaa atatcaatgc
    18241 catattctaa agcagggaac agcacaccgg cagaccaagt gttgtcgatc ataatcacga
    18301 tttctgggtt gatttcacga gcaacacgca cgagagtcgg aatatcaggc acttccattg
    18361 ttagcgagct cggcgattct aaaaaaagca ctttggtgtt cggttgcaca agggctttca
    18421 agccttcacc aatcatcggg tcataataag tagttgaaac acccatacgt tttaacagcg
    18481 cattacagaa ttcttgtgtc ggttcgtaag ctgcgcctgt cattaaaacg tggttgcctt
    18541 gttccacaaa agctaaaatc gcattggtga ctgccgccgc accgcaaggg taaaggtagc
    18601 aacctgctcc accttctaat tcacacatcg cttcttgtaa tgaaaaatga gtgagagtgc
    18661 cacgtctgcc ataaaataat gctcctttgt agcggttttg tgtagcgtgt tttttctctt
    18721 ctaaggtttc aaacactaaa gatgaagcac gctgaatcac cgggttaact gctccttgtg
    18781 tgttacgttt tttacgccct gtatgaacaa gtttggtgga aagattttta tagttagaca
    18841 taacttttcc taaagtaaaa tgcatagggg caaatcaaca tttgcccctt tattaataat
    18901 taacgaaaca taaagttatt tctttgacgg ctacgtttaa attggctgat tagcacaatg
    18961 accgcaacaa ttaagtaaac cgcaaaagta aagattagcc attgtgccat tgaaaagccg
    19021 aacatttccc attggctttg gctacaatta accggaccgg gggcaaacac ttgtggtagc
    19081 cattggtcaa gcggcaaggt ttgcgggaaa ttaactttaa attcgcattg attccatggt
    19141 gatggattga cctgataatc gtggtgtttg attgaaagta ctagcccttt aaatgcgcta
    19201 ccaagccaaa ttagaattgc caagtagcga ataatcgcat atctattacc aagaaatcct
    19261 aaaataccgg caaataaaat accaaataaa gcaactcgct cataaataca cattacacaa
    19321 ggtactaatc ccatcccatg ttggaaataa agcgctgtgc cttcaagtat aagacagctt
    19381 aacattagta aaaaccatgc actgcgagat tgtgatagat ttttaaaaaa atagagcata
    19441 gttattcctc attttgtgaa cttaaggcat tctaccttat ttggtatgag ttatctataa
    19501 actaacgtgt aataaaccat ccccaattta tcattacttc agtcatagaa ggtagtaaga
    19561 attctaaccc taagaaaccg acaatagata gaacaatggt ataaggtaat gccatataga
    19621 ccattctgcc gtaagacagt ttaattaacg gcgcaaagga ggacgttaat aagaataaga
    19681 aagcagcttg tccgtttggg gtagcaacag aaggaagatt tgtgccagta ttaattgcaa
    19741 ctgcaatcag gtcgaactgc tcacgatcta taatgccggc atctagtgcg gttttagctt
    19801 cattaatgta aacagtaccg acgaagacgt tatctgaaat catcgagagc aaaccattga
    19861 aaatatagaa taatgaaagc tgtgaatgtg gttcggcaga taacacaaag gcaatgatcg
    19921 gctcaaataa ttttaaatca ataatcacgg caacaaccga gaaaaacaca ataagcaatg
    19981 cagtaaaagg catagattct tggaatgctt tccctaaagt gtgttcatca gtaatgccac
    20041 aaaatgcagt gcaaataatg atgatggtta agccaataat ccctacatcg gcaagatgta
    20101 gcgctaagcc aataattaac caaattccag caatggcttg caccagcatc tttaagcgat
    20161 cttgtttcgt cattttttgt tcttttagtt ggctatagcg agcgagtacg acccaaactt
    20221 tgctaggaag ccggtctcca taaccaaata atttatattt ttctacaaga aagcaggtcg
    20281 caatcccaca aattaacacg ggtaagctaa ctggtaatgc tctaagtaag aattcgataa
    20341 atccccattc cgcttgggag gcaataatta agttttgtgg ttctcccacc atggtcatta
    20401 cgccacctaa agctgagcca ataccggcgt gcatcaataa acttcttaaa aaaccacgaa
    20461 attgctctaa aatttcttta ttagagatga ttttttcatc attggtaata tcagtagaat
    20521 cttcaaagtt attacctgat gcgactttat gatatacgcc gtagaaacct gttccaacgc
    20581 taatgattac agcaataacc gttaaagcat caagaaaggc ggataaaaaa gcagcgctta
    20641 agcagaaaga aagggaaaga atttttttcg aatgaatggc gacaagcagt ttggtgaaaa
    20701 tataaagcaa taattgcttc ataaagtaaa taccggcaac cataaacatt aaaagaagaa
    20761 taacatcaaa gtttgccata atttcttctt taatgtggtg aggatttgtc ataccgatta
    20821 caactgcttc aatcgctaat aaaccacctg gctgtaatgg ataacatttt aatgccatag
    20881 agagagtaaa aataaattca gcgactagaa accagcctgc aacaaaagga ttgataaaga
    20941 aataaatgag aggattgata attaaaaatg ccaaaatgca caatttatac cactcggggc
    21001 tttttcctaa gaaacttttg aacagagcat caatgctact catataaagg acctcaaaat
    21061 ttgtaaacag atattacaat tgtaatatag tttagattaa aggataatag tattactgaa
    21121 ctttttagtc gcaataattg attagaaata aagaatagtt agattttaga taagcatatt
    21181 ttttgcttgg ggggcattaa tgggtcacag tgatatttta aaagcgcaaa gcccggcagc
    21241 gttagcggaa gaatatattg taaagagtat ttggaataat catttccctg ccggctctga
    21301 tcttcctgcc gagcgagagt tagcagagcg cattggggta acaagaacaa ctttacgtga
    21361 agtactacaa cgtctagcgc gagaaggttg gttaagtatt cagcacggca agccaacaag
    21421 agtgaatgat atttgggaaa cttcggggcc taatattatt ggcactatta ttaagctaga
    21481 taaaagctat cttccagtgg tgattgccaa tgtggtgtca ttacgtactc gtatggcgga
    21541 ggcttatatt ccagaagcga tttaccttgc tcctgaagaa agtgctaaac tctttgatgg
    21601 actagatgaa ttagaaaata cagcagctgc ttatgctgaa tttgattata agttattcag
    21661 acaatttact tttttagcca ataagcctgt gtatgcgttg atcctaaata gctttaaatc
    21721 aatgtatcat caagtcgcaa aaattttctt tgctgatgaa aataatcgtc aattaacgtt
    21781 aagcttttac cgttcattat tatgtacttg tcttgcaaaa gatagtgaaa aagcagccgc
    21841 ttgtatggct aaaaatcgcc aatctagtgg tgaaatttgg caaaaattat ccgctaatat
    21901 tcctgaaagc tttggtcagc tttaacagaa ggtagaattt tgaacgaaat tatttttagc
    21961 ttagaaccgc aagataatgc tcgtctgcaa tcgctttgtg gtgcatttga tgagcattta
    22021 gccttaattg aaaaaagttt taatctcatt attgctcgaa caggcttcaa ctttacgatt
    22081 caatcggaag atgacaatca ctattctgct accttggttc aaaatagtgt gaagctgatt
    22141 aagcaactgt ataatgaaac tgccccgatt aaaggcaaaa ttaaggaatt ggacttagaa
    22201 gatatacatt tggcgattca ggaaagccga atgctactac aaaaccaatg gcaagccggc
    22261 tcgcaaggcg aaatagcgat taaaaccaag cgaggggtga ttaaacctcg tagcgaacat
    22321 caacaagcct atttacgaaa tatattaagc cacgacatca gttttggtat cgggcctgct
    22381 ggcacaggca aaaccttttt agcggtagcg gcagcggtgg aatcgcttga acgccaagaa
    22441 atccgccgta ttttacttac ccgtccggcg gtggaagccg gtgaaaagct cggtttttta
    22501 cccggcgatt tagggcaaaa aattgagcct tacttacgcc cgttatatga tgccctgttt
    22561 gaaatgcttg gctttgaaaa agctcaaaag ttgatggaac gtggtgtgat tgaaattgcc
    22621 ccacttgctt atatgcgagg gcgtacttta aacgatgcgt tcatcatttt agatgaaagc
    22681 caaaacacga ctaccgagca aatgaaaatg ttcttaaccc gtattggctt taattccaaa
    22741 gcggtgatta ccggcgatat tacccaagtg gatttgcccc gtagccaaaa atcaggctta
    22801 aaacacgcaa tggaagtgct aaaagaagtg ccggaactca gctttaattt ctttgacagc
    22861 aaagatattg tccgccaccc tgtggttgcc aaaattgtgc aagcctatga tgcgtgggaa
    22921 gcggttgatg aagagcgtaa agaacagcga aaactggaaa aattagcttt agagcaagaa
    22981 aaaattcttg ctcaagctga aatgttatag cttacaagcg gtcatatttc gctaattttt
    23041 tgcaaaaaat cgctgaaatt tcaccgctta tcataacagt tgttcaacaa aaaagcggga
    23101 agttaattcc cgcttttctt tatcttattg tttcattata agatttcttt tgctttagca
    23161 accacgtttt caacggtaaa gccgaagagt ttgaataatt gatctgctgg tgcggattca
    23221 ccaaagctat tcatacctac aattcgacca tcaaagccga catatttata ccagaagtca
    23281 gctaattgag cttcaatcgc cacacgttta gtgactgaac gtggtaatac cgattcacga
    23341 taggcttcat cttgtttgtc aaacacgttg gtgcttggca ttgaaactac acgcactttc
    23401 acgccttctg catctaacac atcagcggct ttcattgcta aatctacttc agaaccggtt
    23461 gcaattaaga ttaaatccgg gcaactgcct ttttcgcaac attcacgcaa gatatagcca
    23521 ccacgagaga tgttcgctaa ttgctccgca gtacgttgtt gttgagccag attttggcgg
    23581 gtaaagatta gtgctgtcgg gccgtcttta cgttctaccg ccgctttcca agcaacagca
    23641 gattctactt ggtctgccgg acgccaggtt tctaagtttg gaatttggcg taatgaagca
    23701 gtttgttcta ccggttggtg ggtcgggccg tcttcaccta aaccgatgga gtcgtgtgta
    23761 taaacaaata aggcacgttg cttcattaag gctgccatac gcaccgcatt gtgtgcatat
    23821 tcgtagaaca ttaagaaggt tgcaccgtaa ggaatgaaac caccgtgtag ggcaatcccg
    23881 ttcataatcg cagacatacc gaattcacgc acgccgtagt tgatgtagtt accatctaca
    23941 ttgtgttccg cacgaatcgg ttttgagcca gaccataagg ttaagttaga gcttgctaag
    24001 tcagctgagc cgccgaggaa ttcaggtaag attggcgcgt aagcttcgat tgcattttgt
    24061 gatgctttac ggcttgcaat ggttgccgga tttgcttgta atttttcaat aaaagctttg
    24121 ctttcagctt cccagttagc cggtaattcg cctgcgtaac ggcgtttaaa ttcagcggct
    24181 agttcagggt atgccgcttc ataagcagca aatttagcgt tccaatcttt ttctgctaat
    24241 gtaccttttg cttttgcatc ccactctgta taaatttcag ctggaatcac aaatggggca
    24301 tgttcccaac ctaaaaattc acgagcggct tggatttcag catcacccaa tggcgcaccg
    24361 tggcaatcgt gagagtttga tttatttggt gaaccatagc cgataatggt tttacaaata
    24421 attaaagttg gacgctcggt ttcggcttgt gcattttcaa tcgcaaattt gatttgttct
    24481 gggttatggc catcgacatt acggataact tgccagccat aagactcaaa gcgttgtgcg
    24541 gtatcatcag tgaaccaacc atcaacgtgg ccgtcgatag agatattgtt atcatcgtag
    24601 aaagcaatca gtttgcctaa gcctaatgta ccggcgagag agcaagcttc gtgtgagata
    24661 ccttccatta aacagccatc gcctaagaaa gcgtaagtgt agtgatcgac aattttatga
    24721 ccttcacggt taaattgtgc tgcaagggtt ttttccgcaa tcgctatacc gaccgcattg
    24781 gtaatacctt gacctaacgg gcctgtggtg gtttcaacac ccggtgcata accatattca
    24841 gggtgaccag gtgttttaga atgtaactga cggaactgtt ttaaatcttc aatagagaga
    24901 tcatagccgg ttaaatgaag taagctatag attaacattg aaccgtgtcc gttagacaga
    24961 acaaaacggt cacgatctgc ccatttagga ttagttggat tgtgttttaa aaaatcacgc
    25021 cataaaactt ctgcaatatc agccataccc attggtgcgc ctgggtggcc tgagttagct
    25081 ttttgtacag catccatact taaaaaacga attgcattcg ctagcacttt acgttctgtc
    25141 atttgtgtta ctcctaatcg agaatgttat ataaaatgga aaggatatcg aattggattc
    25201 tacactattt tgctagaaaa actcaaaaat ggaaatgaga aatgtgatct gtatcacaaa
    25261 aaatgattaa attgtgattt gttttgattg gatttgattt taatagacgg ttttttccta
    25321 atacaatatt ttcttgataa agcgaatgtt tagtagttga tctaggcaac aaatttatct
    25381 aaaatacgca ctctttttgg cgttgagcat ttgctcaaca tttttattaa ttacatatgg
    25441 tacctatcag cggtagagat tctaacaaga taggcggcga tatggcttct tatgaggttc
    25501 cccaatgaaa caaggtattc acccagaata taaagaaatt acggcaactt gctcttgcgg
    25561 taatgtagtt aaaactcgct caacagtggg taaagattta aacttagacg tatgtggcaa
    25621 ctgccacccg ttctatactg gtaaacaacg tgttgttgac accggtggtc gtgttgaacg
    25681 ctttaacaaa cgtttcagca tcccaagctc aaaataattt gattattgca aaccccgcta
    25741 atgcggggtt ttgtttttct tatatatcga attaacaagc ggtgtatttt tctatcaatt
    25801 ttgcaaattg gtgatttaac cattttgcag gagctaccag agaaaaacct cgagtatcat
    25861 tattatcctc ggtccattta tctgcgatca ccataaaagt ttcaacatct ttcttaggtt
    25921 ttggatacca gcgtgcaata ttagctggat gattggcata aaatgagagc aatttcttgc
    25981 ctaatgcaca agaaatatgg acaccacctc catcaactgc aattacaata tcagcagagt
    26041 ttactaatgc acaataacct aaaatatcac tattaggtgc taggcttatt tcaaatgggg
    26101 ctttaatttt cgacaaatat tcggcactat tggttgtatt ggtcagcaaa caactaatat
    26161 gttgaacata tcttttatca atcatagata atagctctga taattcttga gtagaaattt
    26221 cacgcatact accttgagga ttcaatagta atcgaatttt cttctcttgc catagcgtat
    26281 ttgcaaaact gcttagttca ttaggaatgt ttaaattata attgacctga tttttttcta
    26341 aaaaatcagc aaaaatagca tagttgagat agtcagcaaa atgaacctgc tttggaaaga
    26401 cagtggtgaa atcgtaattt tttactgtat ctaaattgta aatacttttt tgttttttac
    26461 cgaagttaat aataaattta ggctttaaaa tactatctaa aataatactt tttgtggtaa
    26521 atgtcggttt gaaatctaaa taaagatccc aatgtccccg ctgcgagaga taagtggata
    26581 ctttatcttc taagatcata tctaccacgt ttgcttgaga gaaaatcaat ttgttacgag
    26641 atgtaactaa aaccgctatt tttacatttg ggagagcttt tttaatttgc tccaaatgag
    26701 ctatatgcac aacagcatcg ccaatagcat ctccgatagg tttgagtaat acggattcta
    26761 ttttgctaaa tttgaaggtt tttttctctt tttttgtacc aaaaagtttt ataactaagg
    26821 atttcatctc tataataggt tgattctttt aatgattggt tatagtaagt aaaaatgaat
    26881 attaaagcaa cgttaagaaa agcaagattg gtgataggta aagccatttt agatagtaaa
    26941 aatactgatc tgatattatc ggaaattccc aataaaattc tatttcttcg tcacgatggt
    27001 aaaattggtg attatgtcgt tagttccttt gtcttccgtg aaataaaaaa acagtctccc
    27061 caaacgcaaa taggcgtggt ttgctcacag aaaaaccgat atttatttga gaataatcct
    27121 tatattgata agctctattt ggttaagaca aaaagtattc ctgattatat tcgtggtggc
    27181 aaacaacttg caaaagagca gtatgatgtt gtaatcgatc cgactgttac tttacggaat
    27241 cgtgatctct tatttttacg cactatatca gccaaacatt atgtaggtta tcagaaacaa
    27301 aaatatcgat tatttgatct aaatgtagag gatagaaaac agcatttttc agagatttat
    27361 caagatgcgt tagctttaat cgggtttgaa aatatagaaa ctcagtatga tgtgccacta
    27421 aatgccacaa gcaaccaatc cataaagcat tatttatatg aaaaccaaat tagaaattat
    27481 attgcgttaa atctttttgg tgcaggttcg gcaagacgtt ttagtgagca gaaaattaat
    27541 gaactgctga gttgcttaaa acagcatagt gataaaccga tagtcttact tacttttcct
    27601 gaagtaacgg caaaattgtg ttcctttact aagaagtata aaaatatatt tgtctatgag
    27661 aaaaccaaaa gcgtttttga ttcaatagaa ctgattcgtt ttgcggactt attaatttca
    27721 cctgatactg caaccgtgca tattgcctca ggcttgagta aaaagataat tgctttttac
    27781 agtagcgatg aacagaattt tatacattgg catccgaata atcaggctga aacccatatt
    27841 ctccgtttta gaaaaagcgt gaatgattta gattttgctg caataaaacc ggagtggcta
    27901 aaataatatg gacttccaaa gccttaaact tttcctagat atagcccaaa gccgtagttt
    27961 tattcgcagt gcggagaaga attatatgac ggcttccaca cttacccgcc atattcagcg
    28021 tatagaggag gagctcgggc agccgttgtt tctgcgtgat aatcgacaag tgcgtttaac
    28081 tgaagcaggg gaaaggtttt tggcgtttgc tcaacaaggt tgggcagagt ggcagcagtt
    28141 gcaaaaccag ttgtcgcctg ctcaaggtga tttagaagga gagttgaaag tgttctgctc
    28201 ggtaacggct tcttacagcc atttaccgcc gattttggga aagtttcgcc aaaaatatcc
    28261 gaaagtggat attaaactga gtaccggtga tccggctttg gcattggaac aggttcagtc
    28321 attggctgca gatatttcgg ttgcgggtaa gccggaattt ctgccgaata atattgtgtt
    28381 tcactatatt gatgatattc aactttcgat tattgcccct cgtgtggcga gccaagccac
    28441 tcaatttctg caacagtcgc cgatagattg gaaaaatatc ccctttattt tgccggtgaa
    28501 cggacctgta cgaaaacgga ttgaccgttg gtttaaagag caaaaaatca aagacccgat
    28561 tatttatgct accgtctccg gacacgaagc gattgtgccg atggttgcac taggctttgg
    28621 ggtcgcactg ctaccggata ttgtgattaa gcatagccca atgaataatc aagtttctta
    28681 tgtgaattta ccctcgccga tcactccgtt tgagctggga atttgcgttc agcaaaaacg
    28741 cttgcaagag ccgatcatca acgcattttg gcaattattg tctgataatt cagcataaca
    28801 agcggttaga ttttgctaaa tttttgcaaa aaatagagca aaaccgaccg cttgtagata
    28861 aaactttcag ataaaaaata aggtgcgtga ttgtgatctg cgcaccttat gttgttttag
    28921 attattgcac tttattgcac tgtggcttta gctcgcgatt ttttcacctt gatctcggct
    28981 tttgacaaga tttcaatccc cattggcggg ttttctagtg ccagagctag tacctcgtca
    29041 atggtttcta ctgcgtgaat gtccaacgct gcttttgcat tttccggaat ttcctctaag
    29101 tctttttcat tttctttcgg aataatcacc gtcgtaatac caccacgatg ggctgccagt
    29161 aatttctctt ttaagccgcc gattggcaat actttgccac gcaagctgat ttcaccggtc
    29221 atcgctactt ctttacgcac agggttacct gttaggctgg aaattaatgc agtacacatt
    29281 gcaatccctg cactcggacc atctttcggt gttgcaccgt ccggcacgtg aacgtgaata
    29341 tcccgttttt cgtggaagtc ttcagcaatg cctaattttt ctgcacgaga gcgtacaacc
    29401 accattgccg cttgaataga ctctttcatt acatcgccta atgaaccggt gtaagagaat
    29461 ttgcctttac ctgcaacaga agcggtttca atggttaata aatcaccgcc aacttctgtc
    29521 cacgctaaac cggtcacttc gccaatgcgg ttttggctat ccattttgcc gtagtcaaaa
    29581 cgttttacgc ctaagtattc ttcgatattt ttctcagaaa ctgtaatgga ttttaatttc
    29641 ttatccaata ctaaagcttt cacggcttta cggcagattt tcgcaatttc acgctcaagg
    29701 ctacgcacgc ctgcttcacg ggtgtagtag cggataatac ttaaaattgc actgtcttca
    29761 atggtcagct caccctcttt tagtccgtta ttttcttgct gtttagccag taaatgacca
    29821 cgagcaatgt gcattttctc atcttcggta tagcctgaaa gacgaatcac ttccatacgg
    29881 tcgagcaatg ctggcggaat gttcattgag tttgaggttg ccacaaacat tacatcggat
    29941 aaatcgtaat ccacctctaa ataatggtcg ttaaaggctt tattttgctc aggatctaac
    30001 acttcaagca gagcagaagc cgggtcgcca cgcatatctt gagccatttt gtcgatttca
    30061 tctaacaaga acagcggatt acgcacgccg actttcgcca ttttcatcat taggctaccc
    30121 ggcattgagc cgatgtaagt acggcgatgc ccacggattt ccgcttcatc acgcacgcca
    30181 cctaacgcca tacgcacata tttacgccct gtggcattgg caatagattg ccctaatgag
    30241 gttttaccaa cccccggcgg accaactaag cacaaaatcg gaccttttaa tttatttaga
    30301 cgactttgca ctgctaagta ttctacaatc cgctctttca ctcgttctaa gccgtagtgg
    30361 tctttatcca aaatctcttg agcttgggct aaatcttttt tgaccgctga ttttttatgc
    30421 cacggcattt gtaaaatcca gtcaatataa ccacgcacaa cggtagcttc ggaagagctt
    30481 tgcggcattg ctttgagctt tttgaactcc gtattcagct tgtcttttac ctcggtcggt
    30541 aattttgcag cgtcaatttt ctctttaagc ttatctaact cgctttgttc aacgtcatcg
    30601 ccattaccta actctttttg aatcgcttta atttgctcgt tgaggtagta atcacgttgg
    30661 tttttttcca tttgctgttt aacacgatta cgaatccgag tttcggtttc aagcgtatcc
    30721 atctcagttg ccatcgcaat taacaaggct tcaaaacggg caatcagatt tggttgctcc
    30781 aataattcct gttttttctt caccggagca attaagttag aggcaatggt atccgccaag
    30841 cggtcttcca acgtgatttt ttgcagttta gcaataattt ccgccggaat tttcttgtta
    30901 tttttaacgt aattttcaaa ttcggttaaa gtggttttag caatcgcttt taactcttcg
    30961 ttttcgtcat catattccga atatattggc tgaattgccg cccagaagcc gttttcatca
    31021 tcgtgaattt gctcgatttt ggcacgggtt tgtccttcta ccagcacttt aactgtgccg
    31081 tccggcaggt ttaacatttg aataatgttg gcaattacac ctacgccata catatcttct
    31141 gcattcggct cttctttatt tggatcttgc tgagtgacta aaaacagttg tttattggaa
    31201 tccatcgccg agcgtagggc ttgaattgat ttttcacgtc ctacaaataa cggcataacc
    31261 atataaggaa aaaccaccac atcacgcaat gggagtagtg gtaattcaat cgctttcttt
    31321 tttcttggtg ccataaattt gctctctcta tcaaaatata atcccccatt atgagggcga
    31381 atttgggaaa aacaagggaa aatttgattt atcttaaaaa aactcgaata gtcaaaacag
    31441 tagatgttgg cgatttaatc aattgttaaa atcagggtaa ttagcttaat ttcccgcttg
    31501 acatcaaatc gtaatgcgag caaaatcccc tgcatatttt aatcttcagg gcagggtgaa
    31561 attcccgatc ggcggtaaag tccgcgagcc gagcaatcgg caggatttgg tgaaattcca
    31621 aaaccgacag tatagtctgg atgaaagaag agtcaaaaac cgcaaaaaat accgcacaag
    31681 cggtcatttt ttgtgtcttt tttgcaagcc ttgagtcgtg agatttcaag gcttcattgt
    31741 tttgcaggcg gcgtttgcaa attttttact aaaaacgacc gcttgtattg caataatcct
    31801 ttcattacgc cctcaattta tcaaaatgta tatgacagat gttcaatata tggcttatgc
    31861 catcaccctt gccgaaaaag cacggggttg gacaagccct aatccgctag ttggctgtgt
    31921 gatcgtgaaa aacggcaaca ttatcgccga agggtatcac caaaaagccg gtagttggca
    31981 cgctgaacgc aatgcgattt taaactgcga ggaagatctg acgggggcaa ccgcttatgt
    32041 aaccttagag ccttgttgcc accacgggcg aaccccgcct tgttccgaac tgctgattga
    32101 acgtgggatc aaaaaagtgt ttatcggctc tcgagatccg aacccacttg tttctggcaa
    32161 aggagcggca cagcttagag ccgccggcat tgaggttgtg gaagacttta tgcgaacgga
    32221 gtgcgatgcg ctgaacccga ttttcttcca ttacattcaa accaaacgcc cttatgtgtt
    32281 gctgaaatat gggatgacgg cagatggtaa aattgcgact tatacgggga attcgaaatg
    32341 gatcaccggc gaggctgccc gagctaatgt acagaaaagc cgccacgaat atagtgcgat
    32401 tatggtcggg gtggaaacgg tgcttgccga tgacccaatg ctcaacagcc gaatggaaaa
    32461 tgctaaacag ccggtgcgga ttgtatgtga cagccaactg cgtaccccat tggatagcca
    32521 actagtccaa actgcacgcc aatatcgcac cattattgct acgctcaata atgatgcaaa
    32581 aaagcaggca gaatataccg cttgcggtgt tgaaatttta gtgacaggcg aacgtgacaa
    32641 gcgggtggat ttagccgatc ttttgcaaaa gctgggcgaa ctcgggatcg acagcttatt
    32701 gattgaaggt ggttcgcaac tcaatttcag cgtgctggaa caggggttag tcaatcgagt
    32761 acattgctat attgccccga aactgattgg cggcaaagcg gcaaaaaccc cgattggtgg
    32821 caaggggatt ggcgagttag cacaagcggt taaattacgt ctaaaatcca ccgaattgct
    32881 cggagaagat attttgttgg attatgaagt ggacttgctt cgtaattaaa ttgaaatttc
    32941 cttactctcg cccgtttacg ggagagagac agcataaaat ttcgttcaga aattttatgc
    33001 agagagaggg gaaaatgagt gtaatcttcc ctctccctcc gaaaatccta cggattttct
    33061 cttccctctc ccgtaaacgg gagaggggaa tagtaagata agcagttctc agactaaatt
    33121 ggaagtaaat cggagaaaaa tttaaatgtt cacaggcatt atcgaagaag ttggccagat
    33181 agcccaaatt aagaaacaag gcgagtttgt ggtggtaacg gttaaagcaa aaaagattct
    33241 gaccgatgta catttagggg atagcattgc ggtaaatggc gtgtgtttaa ccgtgacttc
    33301 atttacgcag gagcaattta ctgctgatgt tatgtcagaa accttaaaac gtacatcact
    33361 tggcgaatta agtatcaaca gctcggttaa tcttgagcgg gcaatggcgg caaacgggcg
    33421 ttttggtggg catattgtgt caggtcatat tgatggcacg ggtgtggttg cagagattac
    33481 accagcagat aattcaactt ggtatcgcat taaagccgaa cctaagttaa tgcgttacat
    33541 cattgaaaaa ggctcaatta ctattgatgg cattagttta acggtggtgg atgttgatgc
    33601 ggaatctttc cgggtatcga ttattccgca taccattaag gaaaccgacc tcggtacgaa
    33661 aaaaatcggt agtttggtga atttagaaaa tgacattgtc ggcaaatata tcgaacagtt
    33721 tttattgaaa aaagagcctg aaaatccgca aagtaaaatt actgcggact ttcttaaaaa
    33781 tgcagggttt taaccaaata aaggacaaat aatgtttaag ttttcaacgg tagaagaagc
    33841 aattcaagca attgcacaag ggaaaattat tttagtcagc gatgatgccg accgtgaaaa
    33901 tgaaggggac ttcatttgtg cagcggaatt tgcgacaccg gaaaatatca actttatggc
    33961 gaaatatggt aaagggttga tttgtacgcc gatttcgaca gaaattgcca aaaaattaaa
    34021 ttttcacccg atggtgctag agaacgaaga taatcatcaa accgcattta ccgtttctgt
    34081 tgaccatatt caaaccggca ccggtatttc cgcttttgag cgttcattaa cttgcctgaa
    34141 aatgcttgat gaaaatgcta agccggaaga ttttagacgt ccggggcatg ttttcccatt
    34201 agtggcaaaa gacggaggcg tattagtgcg taacggtcat accgaagcaa ctgtggattt
    34261 agctcgtttg gcgggcttga aaccggcagg gctttgctgt gaaattatgg cagaagacgg
    34321 cacgatgatg cagatgccgg aattacaggc atttgcacaa gcacacaata tgccgtttat
    34381 tactattcag cagttacaag agtatcgtag aaaacacgac agcttggtga atgtggtttc
    34441 ggtggtaaaa atgccgacca aatacggtga gttcaaagca cacagtttcg ttgaaactat
    34501 ttcaggcaaa gaacacgtcg ctttagttaa aggtgatatt ggtgatggcg aaaatgtatt
    34561 atgccgtatc cattccgaat gtttaaccgg cgatgccttt ggctcacaac gttgcgattg
    34621 tggtcagcag ttcgcagcgg caatgaacca agtggagcaa gagggcagag gcgtggtgct
    34681 ttatttacgc caagaaggac gtggcatcgg tttaattaat aaactgcgtg cttacgaatt
    34741 gcaagataga ggaatggaca cggttgaagc caacctggca ttaggtttca aagatgatga
    34801 gcgtgaatat tatatcgccg ctcaaatgtt tgaaaaatta ggcgtaaaat cgattcgttt
    34861 gttaaccaat aatccggcaa aaattgaagg actcattgag caaggtttaa acgtagtggc
    34921 tcgtgagccg attatggttg agccaaacga acacgatttg gaatacctta aagttaaaca
    34981 gcacaaaatg cgacatatgt ttaatttcta atccaatact ctctcccctt gtgggagaga
    35041 gacagaaaaa tacttcgttc agaagtattt ttcagagaga gggtatattt tttagaaaaa
    35101 gtttgcaatt tcccctctcc ctgatttttc ttctgaacga agaaaaatct atccctctcc
    35161 cacaagggga gagggttatt gagtatcaaa tttattttaa agaaggaaaa caaacaatgg
    35221 caacatttca aggaaactac atcgcaactg gtttaaaatt cggtattgtg gcaactaact
    35281 ggcacaagat ttttatcgat caactgttaa acggtgcaac cgataaatta ttgcgtcacg
    35341 gcgtagaaga aaaaaatatc gacaccgtat gggtgccggg tgcattagaa atctcaattg
    35401 cagcgaaaaa aatggcacaa agcggtcgtt atgatgcgat tatctgctta ggtgcggtcg
    35461 tgcgtggagc aaccagccac tatgatgtgg tagtgaacga gtcagcaaaa ggcatcagct
    35521 cttctgcttt agaaaccggc gtgccgatta ttaacggtat tttaacggtg gaaaatttag
    35581 agcaagcgat tgagcgttca ggcactaaag ccggtaataa aggcgaagag tgtgcaatgg
    35641 tagcgattga aatggcgaac ctattaaaag ccttagcgta atcagcgata aaatcccctt
    35701 agacccaaga gcctaagggg atttttttat tttctgcgta gtaacaggct ggcaatgaca
    35761 caaaataggc tgaaactgta aattaaccag tgacctaatt gtttaaacgg cgtatcgcct
    35821 ttggttggca caatggtggc agttagtgca tcagcagtaa attgcggtag ttgttcaatt
    35881 acttttccgt tggcatcaac aatggcggta ataccggtat tcgcagctcg aagcaatggt
    35941 ttgccaagtt ctaacgctcg cattcttgcc atttggaaat gttgccaagg cccgatggaa
    36001 gaaccaaacc acgcatcatt ggtgatagtt aataaataat ctgaattttg gcttttttgg
    36061 ttttgttgta actgatcacc aaaaataatt tcatagcaaa tcgccatatt aaatcggttg
    36121 tttttcgcca agaatgatgg ttgaacgaaa ctgccttgtg aaagattaat tggtagaata
    36181 aacacttccc gcatccaatc cagcaccgag ccaaacggca catattcgcc aaacggcaca
    36241 aggtgatgtt tgttgtagcg agggttgctg tgcagggcat attccctctc tttttcgcct
    36301 aatagcacgc tactgttaaa cagttcctct tgctcatttt gatagagtgt gccgataata
    36361 atttcacttc cgtgttggcg agctaagtga tcgagcgagc caagcagcgg gctgatttga
    36421 ttttcaagtg ccggaatggc ggattcaggc aaaataatca gttcactgtt acctaatagg
    36481 ggcagaatga gctgttcgta ggttcgtacg ctgtggttga aatgttgcgg atcccacttc
    36541 attttttgct caatattccc ttgtactaaa ctcactacaa gcggttgttt ttctgtatca
    36601 atttgcacaa attggagaaa gcgagtggca aaacttaagc caaaaatgac cgctagtacc
    36661 atcaatgatg gcacagtttt gttctcttgc tgaataattt tcactagata gctacttgca
    36721 actattacca agaaagtcaa accttcaacg cccaaaatcg gcgcaatacc agcaaagggg
    36781 ctgtctatta agctatagcc gaattgtagc cacggaaaac cggtaaatac cacgcctcgt
    36841 aaatattcgg taaaggtaaa aatcgcagcc aatgcaaacg gattattcag tttgagcctg
    36901 tgtgaaacta cactaaacag cagattataa atagcgagat agcacgccaa caggaatact
    36961 gctatgtagc ttactatggt aggaacacca ccaaattggg tcatactcac agaaacccag
    37021 tttacaccgg tgcagaagta gccgatagac caagcaaagg ttgcccataa tgcggttttt
    37081 ctgtttgcca gagtggctga ccaaaccaag ccggctgcgg aagcaaaggc aagaatccaa
    37141 atatcaaaag gcgaataggc gaaagtgccg attgcaccca gtatgattgc aaggagacaa
    37201 gcggttaaaa aaggcggatt ttttgcaaaa ttcataataa ctcactaaat aaatgaggca
    37261 cgccgaaacg tgccttgatt gaaactcact atattattct tcttcgttag gagaggtttt
    37321 ttccattttc tctaactgtt catcggaaag tgtgactcgt agctgaatca attggcggct
    37381 attagctgag gtgactttaa aatcaattcc gtttaactca atttgctcat ctcgtttcgg
    37441 gaaataaccg aaagcctgca tcactaaacc accaatggta tccacctctt cgtcattaaa
    37501 gtcggtagca aaaaattcat tgaatttttt gatgtcggtg agcggtaata ccgcataagt
    37561 atgtcttgaa agctggcgaa ttggtttgac ctcttcttca tcaaactcat cttcaatatc
    37621 acccacaatt tgttcaagaa tgtcttcaat ggtgactaag cctgaaaccg caccaaattc
    37681 atcaaccact actgccatat ggaagcgttc tgaacggaac tcttttagca ttcggtctag
    37741 gcgtttgctt tccggtacaa taaccgcagg gcgtaatacc tgttgcagat taaagggttc
    37801 agagtcagaa cgtaaatatt tcaataaatc tttagagtga agaatacctt cgatagtatc
    37861 tttctcaccc cgaatcaccg gaaaacgaga gtgtgcggat tcaataatta aatcaataca
    37921 gacatctaaa ggttcattgg catcaataaa cacaatttgc gcacggggaa tcataatatc
    37981 ccgcactcgt aattccgaga tttccattac tccttcgatc atctctttgg tgtcgctgtc
    38041 gatcaattca ttttcaacag agtctcgaat cacttcgact agatcttcac ggtttttagg
    38101 ctcgttttga aaaagcccgc taaatagaga gtgtaaaatc gatttttttt ctgatttttc
    38161 ggtggtgttt acactttgct gttcatcact catagtttgt tccacttaaa taaagtacgc
    38221 ttataataag caaattcagt cacaaagcaa ataaaacatt gctattttca ctcaaattag
    38281 cataggataa gcaaaaatct ttttatttct tcatatttta ggagtttgaa atgaaattaa
    38341 ccaaaatagc attaagttta acagccttag ttgtcagttc gatgagtgtg gccgggacgt
    38401 taagtacatc atcaatggtg gacattttag cctttgacgg gcaacgtgtt aaatccggca
    38461 cgacttcggt tcaaatgagt gagaataaaa cgcatcaagt ggtagtggaa gtcggtggga
    38521 cagttgaagg ggattttttc acctctgatc aaatcatttt gactttccaa ggcagtgcgg
    38581 aaaatgcaaa attagaaacg ccaagattaa attcaaagtt agatcttcgt aaattccaag
    38641 agaatcagac tgtggcaatt aaaaccgatt caggtaaggt tatttcacat aaacaagatt
    38701 tcttaaaagg ggaaggtttc cttgcgaaaa caagagttga agataattta acgaaatata
    38761 acttagcgaa aaaaacagct tcagttgaac agtttgcgac ggcacctctt gaagcaaaag
    38821 gacaaattgt ggtggataca aataaagttt cacaagaaga attacagctt ttatttagaa
    38881 aggcagataa agacacccaa aaacgtttct tagaatgggc gaagaaaaat ataaaataaa
    38941 cctatatcaa ttaataagcg gtcatttctc gccaattttt tgcaaggtgt taaaaaaatg
    39001 accgctcata caatgagatt taccagcaat aatagcagta acgccagcct ctatacatat
    39061 agtctctatc gtaattccaa cgaatttctt caagttctac ttgtgccttg taattttgcc
    39121 aagcaagctt ataacaggct tggaacattg gggcattgac tttttcggca tagcgtttct
    39181 taaatgcttt ctcttcttgt tcggtttggc taagcggcgg attaaattgt tggtacatta
    39241 actccgccgt ttctacatca cattgtttgg cgagctgaac ttgcaaatct tgttctgccc
    39301 gaatttgctt cgctttacgt tcagcttgtt gctctggagt taaagtacag ctacttaaca
    39361 taagtgcgag tgaaaaaatg cagcctaatt tgagtgtttt cattgctgaa tcctctagtt
    39421 gaaattggtg atttattcta ccgcttctaa ctcactttct tcaagttcat cagccatagc
    39481 actaagggca tcacggctaa gttgtgcgag ggctttataa aaaccattgt cgaaagcttc
    39541 tatttttcct aagaatttgc ctgcacaagg tagtaaaaat tgttcgaata atattttttg
    39601 agctaaggca gaatcgagat tatcttcgat ccaagatgcc gtgagaaata gtaacccaat
    39661 gtgatcggca ttttctaatt caggcattgc ccgctcttgt ctaaaagcta caaaattatt
    39721 aactgataat ccataggctg aaattgttgg agaaatagcc ccattttcag caaaaagcgc
    39781 ttgatagctt gctgctaatt gcgtagggtt agcattcttt tgtaagagag tcagcgcatt
    39841 ttcactttgg ctatccgtat ttaatgccca gacttggcgt aatcctcctt gggcaagcca
    39901 gttaaatgtg ccagctaaaa tagggtcggt agggtgacga taaaataagt tgccaaacaa
    39961 acggcaaagc agggaaaaat cgttaatggt agtttcgttc ataatttgaa atagatagaa
    40021 aaaagaattg ttagtatagc agaacacaag agaggactga atgaaatata taggcgcaca
    40081 cgttagtgct tcaggtgggg tggaaaatgc agttttgcgt tccgtagaaa ttggtgctaa
    40141 tgcatttgcg ttatttacta agaatcaacg tcaatggcag gcaccggcat taaaagccga
    40201 aactatcgaa aaatttaagc gtttttgtaa agtgcatcat ttttcagcag agcaaatctt
    40261 accacacgat agctatttga ttaatttagg aaatccggaa gcggaggcat tggagaaatc
    40321 tcgtgtagca tttattgatg agatgtctcg agcaaatcaa ttaggtttaa aattgttgaa
    40381 ttttcacccg ggggcgcatt taaagcaaat ttccgagcaa gattgtttgg ctagaattgc
    40441 agaatcgatc aatattgcag ttgaaaaagt accgaatgtt attgccgtga ttgaaaatac
    40501 ggcaggacag ggttctaatt taggttggca tttcgatcat ttggcaacta ttattgagca
    40561 agttgaggat aaaagccgag tgggggtgtg tttagatact tgtcacttat tttctgccgg
    40621 ctatgatatt agttcttatg aaaagagcga ggcagtattt aatgatttta accaaacggt
    40681 tggttttcat tatttaaggg gaatgcactt aaatggttca aaaacaccat taggcagcag
    40741 agtggatcgt catcatacct taagagaagg cacaatagga accgaagtgt ttgcatttat
    40801 tatgcaaaat atgcatttta accatattcc tatgatttta gagacaattt cgcctgaaat
    40861 ttgggcagat gaaataaaat ttctacgcac attggaacta aaataggtta tactggtctg
    40921 agtagtgggt ctagcagagt ctagacctta ttttgttatc ttttttaatc ttttagaaga
    40981 tttagttaag gaatttaccg ctgtaattgt tctggcgaga cgagacataa attatgaaaa
    41041 aaaatctttt tgcaacaacc ttcaagcccg tatttattgc ttctattttg tctgtttttg
    41101 gagggtattc ttccattgct gtagcaagtt taagttctaa accggccaca ccaaatcaaa
    41161 tcattgcaag taaagcagaa agattagcta agtcttcttc agtatttacc aatcgagcaa
    41221 atcttccaac ttcttccgct catacagcga attatagtgg tcgtattaat agtgtttatc
    41281 ataattgggt agggacacgc tatcgtttag gcggcacaac aaaagcagga attgattgtt
    41341 ccgcctttgt gcgtgaagta atgggcaaag catttagtaa agatatgcct cgttcaactg
    41401 cagaacaacg ccatgtcggg cattccattt caaaatctga tttacgccca ggtgatttag
    41461 tctttttccg taagaataac catgtagggg tttatattgg taatggtaaa tttgtacacg
    41521 ctagttcaag tagaggggta accaccagct cattgtcaga aagctactgg tcaagaaact
    41581 acacacaatc tcgccgtgta atttaataaa ttacaattcc aagatgaaaa gaacactcac
    41641 ttttgcgagt gttctttttt aattaaaaaa gtttatgcta cgcgttgctt agcttgtgta
    41701 aatgctccac gagtacgcat ttgatgaacc acattagtaa ttacacctgc tatttttact
    41761 tcagcccaat cagtaattct aagatttgat tcgctcacat ctaatgaaaa taaaattttt
    41821 tcagcaatac cttccccatt ctgaatttca ttaaagaatt gatagaattt atattcccca
    41881 tctttttcaa gcaccaatag atcattaact aaatattggt tggtctgttc tacaatcaat
    41941 aaatcgtcta gttcaattcc ccacgcgatt aaatttgggt ttttcacgtg gataaaaaaa
    42001 gtgtctcttg ggcgtttgat acaaagtgag ttaagatcga gctttacaga gcggctgcta
    42061 ttgaaatccc gataaagcgg aatcggctga taagctgccg tttgatctga aatttgtcta
    42121 attgaagcca tagtaaaatc ctctatctgt ttttttatac agggtatttt actggctaaa
    42181 ataccagtgt caaccattat tttggaattt tttgtaaatt taaccagtgt tttgaccgct
    42241 tgttatcctt taaaaagcaa taaaaaagca cccatagggt gcttcttatg cttaaaagct
    42301 gttattatag gctttcagtg aatgtacgag taataacatc gcgttgttgc tcaggggtta
    42361 atgagttgaa acgaactgca taacctgaaa cacggatcgt taattgagga tatttctcag
    42421 ggttttgaat cgcatcttct aatgtttcac ggcgtaaaac gtttacgttt aagtgctgac
    42481 caccttcaac tttaatcgtt ggtgcaacat taacgggtac ttcacggtat gcgatatcac
    42541 ctaattcgct gatagcaaca acttgatctt cttcaaatcc tgcttttgca gctaaacaac
    42601 gagcttcatt tttagcttcg tctaataacc agaaagagtt taataagttg ctgtttgatg
    42661 attctgtgat ttgtacacct ttaatcattt tgatatctcc tctaagattg aaattataaa
    42721 aaaattttaa aaattcaaat ttatttgaag ttattgtacc cctttttaga taaaaagcga
    42781 taaaaattta accattttta gacatgattg agttggttgg gtaaaaaata tacacttggt
    42841 ggttttatga aaacttggac agaagcttta ggcgaagaaa aacaaaaagc gtattttcaa
    42901 caaattttac aatatgtaca taacgaacga ttagccggca aagtcatcta tcctccgcaa
    42961 aacgaggtgt ttagtgcttt tgccttaacc gaatttagtg acgtgaaagt agtaatttta
    43021 gggcaagatc cttatcacgg cccaaatcaa gcccacggat tagccttttc agttaaaccg
    43081 ccggttgccc cgccaccttc tctggtcaat atgtataaag aattatctga agatattgaa
    43141 ggatttcaaa ttccaccgca tggctattta attgactggg caaaacaagg ggtatttatg
    43201 ttaaacacca gcttaacggt tgagcaaggt agagccggtt cgcattcaca aattggttgg
    43261 gaaattttta ccgataaagt gatcgcacaa ttaaatcaac accgtgataa tttagtcttt
    43321 ctactttggg gaagccacgc tcagagaaag gggcaattta tcgatcgtaa tcgccattgt
    43381 gtgttagctt ctccgcaccc atcaccactt tccgcatatc gtggattttt tggttgtaaa
    43441 catttttcta aagccaataa ctacttgatt tctcaaggaa tatccccaat taattggcaa
    43501 ttatcagtag acgttagtta ttcttcaaca cattagttta aggagcaaac gatgaatttt
    43561 gatttaccga ttgttagtat tgcatttgtt gtgcttgttt tagttgcatt aagttcgact
    43621 attaaaattg tgccacaggg ctatcattgg acagtagaac gttttggtcg ttatactaaa
    43681 acgctaagcc cggggttgaa cattgtcgta ccttttattg atcgtattgg gcgaaaaatg
    43741 aatatgatgg agcaagtttt agatattcca tcgcaagagg ttatttcacg tgataatgca
    43801 agtgttgcga ttgatgctgt atgttttgtt caaacagttg atgctcgccg agctgcctat
    43861 gaagtgaatc atttagagca agcaattgtt aatttaacca tgacaaatat gcgtaccgtg
    43921 ctcggctcta tggatctaga tgatatgctc tctcagcgtg atttaattaa cggtagatta
    43981 ctttccattg tcgatgaggc gactaatatt tggggagtaa aagtcacccg tattgagatt
    44041 cgggatgttc gtccaccgaa agagctggtt gcggcaatga acgctcaaat gaaagctgag
    44101 cgtaataaac gtgctgatat tcttgaagca gaagggattc gacaagctga aattctgcgg
    44161 gctgaagggg aaaaacaatc tcgtatttta aaagcagaag gtgaaagaca agaagcattc
    44221 ttacaggcag aagctcgtga acgagccgca gaagcggaag ctaaagccac tcaaatggtt
    44281 tctgaagcaa ttgctaaagg cgatactaca gcgattaact attttattgc acaaaaatac
    44341 accgaagctt tgaaagaaat aggttcttca gataacagta aagttgtact tatgccgtta
    44401 gaagctggaa atttgattgg ttctgttgct ggtattgctg aaattttaaa aagcaataaa
    44461 acaagctcat agcctaaaac cggattaatt gagtatatgg agggagtatg gactggtttt
    44521 ttaattggat tggctggagc atattaggct ttgtactact tgcattagaa ttagtattac
    44581 cgggtgtctt tattatgtgg tggggatttg cctcgcttat tcttgctttc atcgttgcac
    44641 tttttacatt agggcaagcg ttacaaattg cgttatttgc gataattgcg actattttta
    44701 gtcttatttg gtggaaatat cagcatggaa aagacaagaa agaggatcag agcagttccc
    44761 ttaactctcg agagcatgct atgctaggag ctcaaggctt tgtggttgaa atcttaccta
    44821 atggcatcgc tcgaggaaaa tttggtgata cgacttggcg tgttataggt aataatttac
    44881 aagtagcaga taagattgaa gtccagaaag tggagggaat taccttattt gtccgtaagc
    44941 aataagtttt ttcttattta gtcatagaac actaaacaaa aaccttgaac agttgttcaa
    45001 ggttttttct ctcaagcggt tgaaaataga gtgaaatttg caaattttca ccctaaatta
    45061 accgcttgtg tcccaccata ataagttaga aactaaagcc aacatttact ttccaaccaa
    45121 ataggtttgc agatttcact cgactgtaat ctaaattcat cgcagtaaac caatttttat
    45181 aatgcagttt caccccgact tcgccgttta attggcgatt acgtttcgtc gttgcttcac
    45241 tatgcagtgt ttttcctgca atgttactgg taattttggt tatttttcca tttaatctat
    45301 gcaagtaatt tagcccgata taaggggaaa tagagccttg ctcaagttgg aaagttcgct
    45361 gtaatttcac gcttggaaca atattcacat cacgataacg cattgcagcc gtttgagtcg
    45421 caagttcgcc actttcattt aaaccattca ttttggtttg aatccattgt acgccaaggc
    45481 ttggttcaat tatccattgg tttggcataa attgataacc gatccgcatt tcaccaccga
    45541 gcgttgaacc tctggtttct gcagtaccta gttgatggct agcaaatcga cggctttgtt
    45601 gatatttctg gcgagcaaat tgcaatgtag cttcactaaa ccaagcgtta tctaaatgat
    45661 aacgtaagcc aatatttaat gctgtttgtt ttaaggtagc ttgtgcaaat ggtttttcta
    45721 agcggttttt ttgctgtgaa agtgttgcac taagtaccgt tttatctgcc agtttgtggt
    45781 ttactcccaa ttgtgattgg tggtgtttaa catcggtatg cttcgatgag gctgattgtt
    45841 tttgattcaa atgttcagcc caaacagtcg tttgcagtgg tgtatggtat gccgtaaaca
    45901 aatgttgctg tgcttgggtt aagcctttgg cattttggct acgtagcaat tcaaggctat
    45961 ctgcataaat attgttagat acagcatagt gcagattatc taatttacgt tgttcgagtg
    46021 cagattgcag ccaaccgtta taccaactac ggcgataggc aataggtgta gttcttaacg
    46081 catttaataa tgctaaaccg gcttgcccgt ttgtatcggc tttctcatca gttagtggct
    46141 tattcacttt tgcgataatt tcgctctctt tgaaatagag atcttggatt aaccctcgtt
    46201 tggctaaatt ctcgttttcg actaattgtg taaatccgcc ttgataagtt gctttatctt
    46261 tcaactgtac tacggtcgct gaaacatcac ctgcttcggt tttttctgtt aatttatcat
    46321 caatttttaa cgagccggct aaatgtatat tggcttgagc attggcaatt agcccagatt
    46381 tgcccaacac ttctaattgg ctttgtccag acgaagaata attttgctca acttcggttc
    46441 cattgacagc taaatttgca tggttactga ttgttttcac cttagtttta ccgtttaagg
    46501 ccaatctacc ttcttcaact gctaccgtat ctaaatgatt ttcgccgtct aaatgcagtg
    46561 atttgtcccc tttttttgta attttaaatt ggctggcgag tggattcgac caatggtcat
    46621 cacgagttac ggtaatcgtt tcatcattta ggaattgagt tgggccatta acagcttttt
    46681 tcaggttaat gagaccccag ccataaacat tatcgacccc tttttcacct aaatcagtgg
    46741 cggtagtcaa taaagtatcg cgaatttgag tcgcagtcag ataatcaaag cgttctttta
    46801 atactgctaa tgaagcagtt atagcaggtg ctgaaaatga cgtaccttgc tcttttgtta
    46861 agccatattg tggtttttta tgttcatcag caacgccaat taaaacatgt aaatcgcccg
    46921 gtgctgctac acaccagttt ttacttgctc cgcagtggtt agagtatgaa gcaatttttt
    46981 gttctttatc taccgcaacg gcagaaatta aatttttctc aagctcggga aagtaacgtg
    47041 gtagaagagc cattacgcct ggctgtttct tgctctcatt accagcagca aagactaata
    47101 aggtgttgct atttttggct ctcataatag cttgaagtag cggattgtgc ttattttgct
    47161 tgatagattg ataaaattta tctacaacat tgatgtcatc gctaatagaa aaaggattcc
    47221 aactattatt gattgcaaaa acattattat ctagtaattt attcagcccg gatgcccatt
    47281 cagcacgttc aattgccatt tctttttctt tgcttgctaa taagtcattc tttgccattt
    47341 gatccagact tggcgttttt tcatcctctt cgtcttttgc attttctaat tctttcttag
    47401 catcttgaat aactttttct aaagttcgtt tatatgactt cgttgcaaca taaagctcag
    47461 ctccctttgc aataccacca ctatagccat caccaagagt tttatctgct tgagcggcaa
    47521 taataccagc tacacctgca ccgtgtgttt caagagaagg aataagatca attccatctt
    47581 ctttttctac ggggtttacc tcgaattgag ggtaacttgc atcgtagatt cttacttcgc
    47641 cttcgggtgt tgttaattga tgaataagag gatgaagatg tgaactatgg cgagggtgtt
    47701 taaccatgaa gccctcatcc attacgccta gtttaacacc cttgccacta tattttgagc
    47761 tgaggctctc agataattga atgataggtt gtggattctc tattgattct gtagcgtatg
    47821 caatagataa aaaactagaa atgctaattg caataagtgt tttgttaaat gaatgcttta
    47881 ttttatacat aat
//
LOCUS       DANLZQ010000008        43010 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.008, whole genome shotgun sequence.
ACCESSION   DANLZQ010000008 DANLZQ010000000
VERSION     DANLZQ010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 43010)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 43010)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..43010
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.008"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            32..751
                     /locus_tag="PXE50_000390"
                     /pseudo
     CDS             32..751
                     /locus_tag="PXE50_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616566.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
     gene            811..1260
                     /locus_tag="PXE50_000391"
     CDS             811..1260
                     /locus_tag="PXE50_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudoazurin"
                     /protein_id="HDL5621329.1"
                     /translation="MLAKLKWNQLACVTLAFCSASVFSAHHEIKMLDNNAEGSMVFEP
                     GYVKAEVGDTVTFIPSHKGHWVESRSIPEGAEKFLSKEDEEFTITLTHEGVYVYYCPP
                     HRTMNMAGIIQVGQALNLEATQKEVEKIEKRTKENKGRLFEYLEQVK"
     gene            1361..1882
                     /locus_tag="PXE50_000392"
     CDS             1361..1882
                     /locus_tag="PXE50_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Type II secretory pathway, pseudopilin PulG"
                     /protein_id="HDL5621330.1"
                     /translation="MYKAITLIEILTTITIMVIAVYFISPVIFTLQDRIALHSEIENI
                     QSFIQQIQTKARYTKRNYTLTLSQRNNQWCMIAVIKPINTSKQIICDCLNKHFCDLGK
                     EYHLYTPTHQQIVLKNKSLYPKSFINVDGVSGQLESKCIKLSLNKENEILQFEQLGRV
                     YVAAKNKRSTCKD"
     gene            1914..2540
                     /locus_tag="PXE50_000393"
     CDS             1914..2540
                     /locus_tag="PXE50_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621331.1"
                     /translation="MASALGAFLLLLVASSYADFYYTQTKQKEQLYLQAEAHQLLNYF
                     QQHFQHIGYQGSHRTDSNFDLFQQAGKSLNIVHKNCIIGFYDLNQDGCLGKRKTKTAA
                     CKLGTVNNTREVLKEIVGFKVENNEIYTFSSQLDNCVKEQCQTLLENCDGNWSKFTEA
                     NNFKTKKLDFSWRQEDNLLKIELEIESPKQKGLIYTAVRYVFILNNTR"
     gene            2543..3226
                     /locus_tag="PXE50_000394"
     CDS             2543..3226
                     /locus_tag="PXE50_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2572 family protein"
                     /protein_id="HDL5621332.1"
                     /translation="MNKYKNASALLVSLILISTILSVLFLSKEKWLGQQNITHFYREK
                     YLSDQYNFLALYPQDKTQICQKFQKEQISQADLSDKQFRFLQYQFACQFHSLFKDKKP
                     TKEKYIHFTHLADYLDLSNVPNQEIYTIHSLAELPSSSEREPKIVLAKNAINENLPQE
                     FYGIVITDYLFDITGKKMYGTLYSSYDNAREERNLTFKKEVLAELEARYSAWRYLPYS
                     EHLMGAVDD"
     gene            3219..3512
                     /locus_tag="PXE50_000395"
     CDS             3219..3512
                     /locus_tag="PXE50_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5374 domain-containing protein"
                     /protein_id="HDL5621333.1"
                     /translation="MIKYKAETALSLLVAITLFAIVVLSFSQWQSAQNHRLNQHFQQQ
                     QAVMILENQLALKLAGLDCESSITQNQIRYQIQCSGNRLTIRFPLGKIELNND"
     gene            3561..6851
                     /gene="recC"
                     /locus_tag="PXE50_000396"
     CDS             3561..6851
                     /gene="recC"
                     /locus_tag="PXE50_000396"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HDL5621334.1"
                     /translation="MFTLYQSNQISSLAEMLVKIQQVNPLEDPFEPETILIQSQGMAQ
                     WLQMQIAELNGVMGNCDFLYPTTFLWQQYRLLFPELPKENIFERSSLVWRIMRLLPSC
                     LTLSEFAPLKRYLGDQPNKEQYQLKLYQLSAKIAELFDQYLVYRPHWLVSWEEGNLQA
                     IENEIKIATAAKPIDFDLIRADMKWQSHLWQQIVSDLQSESDEQVFTTSHRAYLQQNY
                     FAKLDDLTETEKAKLPKRIFIFGISSFSPLQLAVFKKLSEHCDIHLFFFNPSEKYWGD
                     SVEEKVWQKLALSHKISQDDLDNLLAEQRNKLLNLWGKQGRDFLAQLIEFEPNTMDVF
                     VEPEENSNLNKLKKQIFSLENDATITDLTADNSLQIHSCHSPMREVEVLHNQLLNLFE
                     QDSTLLPKDIIVMSPDINKYAPYIDAVFSRYNTGNRDPRYIPFSLSDQAFTQVDPIIH
                     SFLQLLAMKESPFNAEELFDLLEVNAIQTRFGFSTEDIHTLRVWVRNAGVRSGVEIEQ
                     PHWQNYNSWENGLNRLLLGSSLKEEQGIWENTLAFGDSYGLNAELVGRLASFIEALLA
                     WVNFLQTPQPLAAWQQAIKNLTADLYQENAENAASILLLNNVNDQIIEQISATHFSDD
                     LQIEVLALLFEQQLSQHSQQLNFLVGRVNFATLLPMRAIPFKVICLLGMNEADFPRQQ
                     QINSFDLMQYAPKKGDRAKRDDDRYLFLEALLSAQQMFYISYIGQSQKDGKEMLPSIL
                     VSQLLDAMNEALTPECKQQLSDEVEVLVRKQPLSVFSKKNFTHPRDHAYNAEWIIKPT
                     VAVQDFLSEPLTNESVASLELDELISFVQNPIRFFFLKVLGISFNTYDDTIDESEIFE
                     MSGLDNYRILNELLTINLAQQQRFFAEEQLKGNLPASYFAQIATQDLIGKITEMQAAL
                     SHYLASESRILSVNREVELERQTLTLNGNIANLYQNEVVLWRVGHLRDKDKIQTWIYH
                     LLLCAYFPEKTVKFYYREGEQVGVLSFETVSQIEALSQLSIYLNAYLDGLSQAQLVIY
                     DRIEEYLKGDGTNSEQVLIDLAEKDERDGSYLHRLLAQTKELDSQAIHQRTQSWFSLM
                     NQKIAKGD"
     gene            6987..9932
                     /gene="ptrA"
                     /locus_tag="PXE50_000397"
     CDS             6987..9932
                     /gene="ptrA"
                     /locus_tag="PXE50_000397"
                     /EC_number="3.4.24.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin"
                     /protein_id="HDL5621335.1"
                     /translation="MKLSFLTQFVAAAFALNVMTYPAFAEVAKNSEKTTASQPQSQLG
                     FELIKQSINKSPNDKAIYQGIKLDNGMEVLLISDSQANKSLMSAIIPIGSMDDPISQQ
                     GLAHYLEHMILMGSKNYPETNSLDGFLTKNGGMNNASTASHRTAYYLQVNNEAFSEAV
                     TRLADTLAFPLLLETNAKKEVNAVNAEMVRAKSHDGHLLHSVNLATANPAHPATKFAV
                     GNKETLSDKPDSKLQTELEQFYKQHYSANLFKVVLYSNQSIEQMAKLAANTLGKMENK
                     HFSIPQTAEPRYRDEDKSVFIQYKPVKSNKMLVIGFDFPNDEMQFKHKTGKYIAYMLN
                     NNTDGTLSDYLIKQGLSDGGIEAVSSANIGRDRGSFDIYIELTDKGLSEQDQIISLVF
                     QQIEKIKQEGIQESYFSEVKESLKQDFQHLQVEKNMDFVEFIADQMLHFPLEHVIDQP
                     YLTETMDNEAIKAKLAAMNIDNARIMLVSDTAKTDKKTPYFEAGYSVAKITQEQKQKW
                     LDFSKNPQLNLPELNPYFTTDFTLNKVETGLTKPKLINDQAGNLIYTMPSVYFTNEPK
                     AKIGVGFNIRPRKDDLKSLTAASILGYMNNLAQTKLDFQSSVAGMNLSLAPAANGLAL
                     SAEGYTQNLAKLMLDSVKQFSRFEFNEDVLAQAKQRLHQELDRNEKENSLNQANAALS
                     RFASYPYFDVPKQREMIDSITLADIEQLRQRILQQSSGFKLLSVGNLSAEQVSALAED
                     LQAVIKNQKSANATGQYVDVSTSQRKINVIKSVPNEDNALLMAFMPNGYNELESLTRA
                     KLLRSIISRWYFDDLRTDKQLGYVVYATDNIIGKTAGIQFMVQSPNTTPAGILEHNER
                     FFTQSFERLKNLSDEEFGKYRDSLVEKLQYKPESLAEEFSEFGSDFSRNNPKFDRLQQ
                     VIELTKALTKADIVAFYQKAVIEKQGFVFVSQAVGTKTKAEDVAKFDGFEQIESIEKL
                     QREFEIKDY"
     gene            complement(9981..11627)
                     /locus_tag="PXE50_000398"
     CDS             complement(9981..11627)
                     /locus_tag="PXE50_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5621336.1"
                     /translation="MKFPTLTKISASVLAVLALAACDDKSNENKPTAAAAKPQTEKTF
                     VNCVSRSPTGFSPILMMDGLSYNASSQQIYNRLVEFVPGTTDIEPALAESWEISEDGL
                     TYTFKLRKGVKFHSNKDFTPSRELNADDVVFSFNRQLDKNHPYHTVSNGTYPYFNAMK
                     FPTLLKSVEKVDDSTVRITLTKRDASFLSSLGMDFTSIYSAEYADKMMKAGIPEAVDT
                     TPIGTGPFVFSGYVLDQASRYVANKEYWKGKPDIDRLIFEIVPDATTRYAKLQSGQCD
                     LMDFPNATNIEKMKNDPKINLLSQPGLNIAYVAFNTEKAPFDNVKVRQALNLAVDKKA
                     IIDVVYQGNGFAAKNPLPPTIWGYNDSLADSEYNVEKAKQLLAEAGFPNGFETELWVQ
                     PVVRASNPNPRRMSEIIQADWEKIGVKAKLVTYEWGDYIKRTKAGELTAGTYGWSGDN
                     GDPDNFLSPLFGTPNIGNSNYARFTNPELDALLEKALGSSDKAERTKLYEQAQVILRE
                     QAPWINVAHSINFAPTSKRVEGYKQSPFGYTYLYPVKIVD"
     gene            11703..13793
                     /locus_tag="PXE50_000399"
     CDS             11703..13793
                     /locus_tag="PXE50_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent
                     hemoglobin/transferrin/lactoferrin family receptor"
                     /protein_id="HDL5621337.1"
                     /translation="MIFANQSIELDTVNVIATRDPSKFADTPQKQTKDALLVKQATSV
                     AAALKALPNVDVQGGARAIVQKPSIRGLSDNRIVQVIDGVRQNFDLAHRGSYFVPMSL
                     IQEIEVIKGPSSSLWGSGALGGVVAMRTPNALDLLKNNDKFGAKIRQGYQTANNLSET
                     EASVFAANDRFDALLSGFYNNADNLRSGEGKELNNTGYKQAGGLVKFGWQINDTHRLE
                     LSHRHSQFKQTAPGNNEVENQFTDNDVSAQISAWHAANPGNPSNPVYLAKMLAFYGQL
                     HSSLGSVSYLSDQKITDKSTSLNYYFNPSNPYLSTQVTLYSNSTTENEHRKISGVEDQ
                     TKLSTRGVNIRNHSELSWFSLVYGVDYMLDKVATQRGRNNTDAQYRANPYDAKSKTTG
                     AYLIAHIPLFDEKVVFSPSVRYDRFDTSSETVKYKDSHWSPAAKLTWKATNWLDLTAK
                     YNEAFRAPSMQERFVSGSHFGTTVRGLPINNIFLTNPNLRPETAKNKEVTFNVHFDNV
                     ISQGDKFNFEATYFRNDVKDLINLQVFKANPTSPMEFIPTRSQYQNIANARLSGIELQ
                     TRYQTERLAVFANYGSTKGKDKDSGEALSNIAASKIGFGVNYAVVQDKFTVGANVTRY
                     QAQHRVPKNHGVTYQGYTLTDLHATYAPLKGEWKNLRLDVAVENLFDKKYQPAFSLME
                     GSGRNVKLSAAYSF"
     gene            13864..15552
                     /locus_tag="PXE50_000400"
     CDS             13864..15552
                     /locus_tag="PXE50_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HDL5621338.1"
                     /translation="MKFYPSLIASAVSFAVVLSGQAAVNVPDAGSLQRELDQRQAQQK
                     VKPSGEWFNQAAKAPYTATDGQELTFPLTQVQVFDRTNQEISTPELAPILANYVGKAV
                     SLTDLSNLANEITEFYRSHNYLVAKAILPPQEIEQGKVKILLFKGNVGEVRLQNQSAL
                     SDKFVARLANTTVNGSEFILKDELEKFALTMNDVPGVNTGLELSAGKQAGEANLLIKL
                     QNAERFSGYVSADNQGNKNTGRYRLATGIKANNLIGWGDELKVDLMSSNNANLKNARL
                     DYSSLIDGYATRLGLTANYLDYELGGNFKALQSQGHTHNLGAYVLHPTIRLPDFRLNT
                     KVSFNHQRLTDKQQAVNVAQKRQVNSLTVGINGSWNSLKDGTSYFSLSALFGNLANHT
                     NEQAHYVATDFQPKSRFTVYQYSLSHEQALPKSFAFNLGVNGQFADKTLDSSQKMLLG
                     GLYGVRGHQAGVASVDEGHLVQTELKHYLPLFSKSLLTSSVFYDYGWGKYYKHSGFLA
                     RGVNNSVKLQSIGAGLSLSEAGSYAINASVAKPLGKKIENADKHQFWFSAIKTF"
     gene            15564..18380
                     /locus_tag="PXE50_000401"
     CDS             15564..18380
                     /locus_tag="PXE50_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
                     /protein_id="HDL5621339.1"
                     /translation="MFKRNAISLCILTACSGLAYANTADLPQGERVRVGTATIERTTD
                     KMTVNQSSNKVQIDWNSFDIGKNKEVEFKQPTEMAVAYNRVTGGNASQIQGKLTANGK
                     VYLANPNGVLITKDAEVNVGGLLVTTKDLEKISENGTKDKFSRKLAKEGKILNQGKIT
                     AKGERAFVVLVGDDVANEGEINAKNYYHKETKKVTECYDDSWSLVKQCYDFDKEIVKS
                     TSGEVHLSSGENVTFTLSDRYIDVALDDNTVNSIIKNDGAIIANGDITLTAKGRNQAL
                     DSLIINNGVLQANKVQNKNGTIILSAGETQLHEKSQIKGEKVSFAEASYYGPTEDIKV
                     VSKTGSKVTAPVIDFKGKTVNIQGEFGREDSTDLYNDELQILKTTVNIEVPNTEDIRI
                     ADTDNGGSGSFIQAGALASLLANNGRVNVQGKGFDVSGKLNVNAFKQTDSVLKFINQA
                     GINIHNADIHANGRLFFVTNLPNDTDFQSNIRITDSKINLGNGSMGFGRSSKRWEMHD
                     VVRRADTELRKKFNLDMKNVELNQVDDFVVAGGFQQVNLDNVKARGKTNFYLDSGNSR
                     MFVGEQIYEYGVTDIEKRTQLANLDQRRKRWNSDNYDETDLNWEYNQRFDGFAAKHNH
                     RAPIADTEINIANSDISLDNGFVHLMAEKINLDDSKINITFNQDNSLDESTQINRLGL
                     NGKVSMKNSHINVVGDEKDGISPARHYATMFLVGELLGEKSSIFLKSHQGAVLRTDSN
                     VTIAGKNSKDDLKITAITTGKKMGNEIIGPDGLPTSEDNDANASNTAFAIGYEPNATA
                     IVENASITALAPNGGLAYTGTSKTQIDAKDNATFTFFEKPRAGYDKLLGDIKGNPDKL
                     TPRDFARLYDNIKGIKASSLSEQQLGLADTAKKTSEHTLANSLDVENLVSVTVCDEQN
                     KCEERMLGNKNTNAKVIVGDIKFE"
     gene            18503..18634
                     /locus_tag="PXE50_000402"
                     /pseudo
     CDS             18503..18634
                     /locus_tag="PXE50_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587011.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            complement(18689..19450)
                     /locus_tag="PXE50_000403"
     CDS             complement(18689..19450)
                     /locus_tag="PXE50_000403"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HDL5621340.1"
                     /translation="MKLNQAQIQNALICGQAVVFDEIDSTNEYLLTHHQRLENGTVCL
                     AEKQTAGRGRRGRTWYSPESENLYFSILWHYPMEQAADLPPLSLVVALIIAESLTVQN
                     VKDIQIKWPNDIYYQGKKMGGILLETQANRNGLDVVIGIGLNLGMAKVDENIVTQAWA
                     DLSQYHFNRNELVCRLAYELQKNLKIYPLVGFAHYAERWQSFDLFRHKAVKLITEAEE
                     IHGISQGINEQGELILKQGDNLRYFGIGEISLRAD"
     gene            complement(19462..20493)
                     /gene="murB"
                     /locus_tag="PXE50_000404"
     CDS             complement(19462..20493)
                     /gene="murB"
                     /locus_tag="PXE50_000404"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HDL5621341.1"
                     /translation="MMKHSLTPFHTFHLPAKATQIIEFTTVEQLLSEWQKAFNAQLPI
                     LILGQGSNVLFLEDFDGVVLVNKLKGITHHEDEHFHYLHVQGGENWHELVKWTLAHNI
                     AGIENLALIPGVASSAPIQNIGAYGVEFEQVCDFVEVLNLRSGELFKLSKSECEFGYR
                     ESVFKHQYRDEFAIISVGLKLAKAWKPVLSYGSLAQLNPETVTPIQIFDEVCAVRSSK
                     LPNPDEFGNAGSFFKNPVISNEQFAPIQAKFPAIPHYPQADGTVKLAAGWLIDQTGLK
                     DLQIGGAAVHTQQALVLINKENATGQDVLALAKTVRQRVKEKFGVEIQPEVRFIGKNG
                     EVDSEKITR"
     gene            complement(20597..21271)
                     /gene="crp"
                     /locus_tag="PXE50_000405"
     CDS             complement(20597..21271)
                     /gene="crp"
                     /locus_tag="PXE50_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010787261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cAMP-activated global transcriptional regulator
                     CRP"
                     /protein_id="HDL5621342.1"
                     /translation="MQDMTLSTAPLENVTPPPSIHDPAVEWFLTHCHIHRYPAKYTLI
                     HAGEDAESLFYIVNGSVSVYIKDDETKEMLLTNLGTGEFVGELSLFEEKVQQRTAYVR
                     TKGPCEIAEISYKKFKQLVHLNPDILMYLSAQMARRLRQTSRQVGNLAFLDVAGRIAQ
                     TLLNLAKMPDAMTHPEGMQIKITRQEIGQMVGCSRETVGRIIKMLEDEGLISAHGKTI
                     VVYGAR"
     gene            complement(21333..21551)
                     /locus_tag="PXE50_000406"
     CDS             complement(21333..21551)
                     /locus_tag="PXE50_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheU family protein"
                     /protein_id="HDL5621343.1"
                     /translation="MIIPWQELEESTLHNILDSFILREGTDYGERELSLAEKRERLLT
                     QLKADKVVIVWSELHESLDIKDKKSFLG"
     gene            complement(21554..22159)
                     /gene="slmA"
                     /locus_tag="PXE50_000407"
     CDS             complement(21554..22159)
                     /gene="slmA"
                     /locus_tag="PXE50_000407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid occlusion factor SlmA"
                     /protein_id="HDL5621344.1"
                     /translation="MTEPKIKMPKKSVVERRQQVLEVLISLLNSEEGMQRITTERLAA
                     AVGVSEGALYRYFPSKTKMFEALIEKIEQTLTSYIHANKRQDSSANSVRAILYVILEF
                     ARKNPGVTRILTGHALMFEEELLKARVAKFFDNLELQFANILQLSKLRERKSFEDERA
                     LAGYLVNFCEGQFLRLVRSNFSYNQHQHFEKQWAFIKPLFD"
     gene            complement(22171..22626)
                     /gene="dut"
                     /locus_tag="PXE50_000408"
     CDS             complement(22171..22626)
                     /gene="dut"
                     /locus_tag="PXE50_000408"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014550997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HDL5621345.1"
                     /translation="MKQIDLKILDSRIGNEFPLPAYATEGSAGLDLRAMLNEPLTVKA
                     GETVLIPTGISIYIADPNLAAVILPRSGLGHKNGIVLGNLVGLIDSDYQGELKVSLWN
                     RSQADFTVNVGDRIAQLVFVPVVQASFNIVQEFEQTDRGEGGFGHSGKQ"
     gene            complement(22660..23499)
                     /locus_tag="PXE50_000409"
     CDS             complement(22660..23499)
                     /locus_tag="PXE50_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
                     /protein_id="HDL5621346.1"
                     /translation="MKKYNIVFSADKNYLPYLEIALKSLLAHHNHLSIFILSTGDISH
                     HWIETLRPYLENRYSTLRLGYLDSNNLANFNSNGYITNSTYLRYYIEELFEHSDSPYW
                     IYLDCDLVVNGNITDPFTNLDFSFGSIAAIADPYVNKLKNHPYIYKNYFNAGVFYLNA
                     KHFSKQPFIQLTERFKENLPFGDQDILNYCFQYNWIELDRKYNYQTEHLLDDIAQQKI
                     SPNYIPHIIHFTGGIKPLEGKFNSSYVENVASLFRFYHNTSWEILTELPLGTIQLKPF
                     ITE"
     gene            complement(23486..23668)
                     /locus_tag="PXE50_000410"
     CDS             complement(23486..23668)
                     /locus_tag="PXE50_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1016 family protein"
                     /protein_id="HDL5621347.1"
                     /translation="MKIMQLTSNQYINDIKHILLSARQKAYQAVNSAMVEAYWKIGER
                     IVQEEKNMVKDQNEKV"
     gene            complement(23665..23982)
                     /locus_tag="PXE50_000411"
     CDS             complement(23665..23982)
                     /locus_tag="PXE50_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621348.1"
                     /translation="MKLLVSHFHQGEGKFPTFSAGTAVRLGSECVNYPNWFACEIDGW
                     KTFVPSHFISEDKLICDYNPTELVAAQGERVEFLELHYQWAIVKRENEIGWLPCEILR
                     VIG"
     gene            complement(23982..25184)
                     /gene="coaBC"
                     /locus_tag="PXE50_000412"
     CDS             complement(23982..25184)
                     /gene="coaBC"
                     /locus_tag="PXE50_000412"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HDL5621349.1"
                     /translation="MLQNKKILVGISGGIAAYKTIEFIRHLKKANAEVRVVLTPAAEA
                     FVTPLTLQAISGNAVSTSLLDPQAELAMGHIELAKWADLIVIAPASADFIARLRMGMG
                     NDLLSTLCLATASPILLAPAMNQQMYKQIAVQENLSVLVNRGVQLIGPNSGFQACGDV
                     GAGRMSEPEEIYQAVLAHFSNNQDLEGLNVTITAGPTREAIDPVRYISNHSSGKMGYA
                     IANAFAERGAKVTLISGPVNLPTPKNVERINVESAVEMEQQAVKFAQKSAIFIGCAAV
                     ADYRMAAVSDQKIKKTDANDELTLKLVKNPDIIANVANLAENRPFVVGFAAETQNVAE
                     YAKSKLERKNLDMICANDVSGGQVFGQDQNALHLFWKNGEKTLPLADKSKLAESLVQE
                     IVKHYREK"
     gene            25334..26071
                     /gene="radC"
                     /locus_tag="PXE50_000413"
     CDS             25334..26071
                     /gene="radC"
                     /locus_tag="PXE50_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HDL5621350.1"
                     /translation="MEEKMNDFFDEDSQEPTMMPREKLLTQGAASLTDSELLAIFLRT
                     GTKAVPVLALAESVLMAFGSLRQLLNANIDDFCKIYGLGKTKYIQLQASKEMTKRYLA
                     QQMEFSEMIQAPYMAIMYFQTELEEEEREVFMVLFLDNQNRLIYKEKMFFGTINQTAV
                     HPREIIKRALKYNAAAIIVAHNHPSGSCLPSESDRSLTKKIEMACELVDIRFVDHIIV
                     GKGDYFSFEEEKLEMKEHSFLQISDRK"
     gene            26303..26539
                     /gene="rpmB"
                     /locus_tag="PXE50_000414"
     CDS             26303..26539
                     /gene="rpmB"
                     /locus_tag="PXE50_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_004997628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HDL5621351.1"
                     /translation="MSRVCQVTGKRPAVGNNRSHAMNATKRRFLPNLHTHRFWVESEN
                     RFVTLRLTAKGMRIIDKKGIDAVLAEIRARGEKI"
     gene            26551..26721
                     /gene="rpmG"
                     /locus_tag="PXE50_000415"
     CDS             26551..26721
                     /gene="rpmG"
                     /locus_tag="PXE50_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HDL5621352.1"
                     /translation="MAAKGAREKIRLVSTAETGHFYTTDKNKRNMPEKMEIKKFDPVV
                     RKHVIYKEAKIK"
     gene            complement(26802..27557)
                     /locus_tag="PXE50_000416"
     CDS             complement(26802..27557)
                     /locus_tag="PXE50_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDL5621353.1"
                     /translation="MSKNRLEQILLFLKNHNIATVEQLVKVTEASPATIRRDLIKLDE
                     EGVVIRTHGGVSLNQFIPFQPTTNEKQFKQIVEKERIAEYAVSLISPGNSILLDAGTT
                     TLCIAKKIAHMPLRVITTDLHIALLLSEYKQIELIITGGRVDNSSQSCIGNHSLTLLE
                     NINPDIAFVSCNSWSLEKGVTAPTEEKANLKRMLQQNAKQKVLVADSSKYGKYSLFRA
                     TQLDNFTQIITDKGLPIEYSQALSSNDFKLSLV"
     gene            complement(27665..28891)
                     /locus_tag="PXE50_000417"
     CDS             complement(27665..28891)
                     /locus_tag="PXE50_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four-carbon acid sugar kinase family protein"
                     /protein_id="HDL5621354.1"
                     /translation="MKETLLVIADDLTGANDTAVMFAESGFDTVLKTKVSALAQIHPD
                     KAQVISVSTDSRAIGEKAKELTQIAISNAIQNSIGQIYLKIDSTMRGSVKYQIEGAIK
                     AWAGLYPDVKAIICPAYPEMGRTIEAGHLYVNGVPVNETASGKDPICPVHSSSMQKLL
                     PDAQVIPCDTVDNLQASIENSEYKQIVIDAKTHEDLSMIAQVINHIGNKIIPVGSAGL
                     AQKLKNIQNQQQPERNLKLGRALIVVTSIHETSQLQVDEYISTLGGKSIVFNPSPSQL
                     INYSQSEHSLKLQLNALIRFSRDHVIIRANPAKVVNAKSANITETSKEISQHLADLSK
                     FCLDNEKFDSLILFGGDGAAALLDQMNVTEMNVQYAVVPGVPLCSIEKGNYSGITVMT
                     KSGGFGNNTLLSNIMN"
     gene            complement(28888..29886)
                     /locus_tag="PXE50_000418"
     CDS             complement(28888..29886)
                     /locus_tag="PXE50_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-keto-3-deoxygluconate permease"
                     /protein_id="HDL5621355.1"
                     /translation="MSTQTSKSIVPIYDGMNKIPGGAMVIPLILGSIIGTFFPEFLNL
                     GSFTTALFKSSAGPLIALLIFATGMQITVRSSGPVLAHTGVVLLFKTIIPALLVVILG
                     LWVGNDGVMGVSLLAMLTVVANSNGGIWLAFTGKYGDYRDKGAYVASAVNDGPFFVLL
                     FLGVSGLADIPLSLMLAAVIPLIIGMVIGNLDPKWTELMKPTGAIVIPFFAFALGTGI
                     NLQSIITGGATGIILGIVASLFTGFLVFIGYKTILRRGNQSGIGFAAGTTAGNAIITP
                     EIVAQADPTLAPFVQTATAQIAAAVLVSAILAPLFAAWVLKRQGGLEQDTIKGENL"
     gene            complement(29897..30898)
                     /gene="pdxA"
                     /locus_tag="PXE50_000419"
     CDS             complement(29897..30898)
                     /gene="pdxA"
                     /locus_tag="PXE50_000419"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HDL5621356.1"
                     /translation="MKPILGITMGDAAGIGPEVIIKALANQRIYELAHPVVIGDRKII
                     QRALPIVHSELKLRILNNLDNFVAEYGVIDILDLNNLPEDLPFAQVDPRAGKAAYEYI
                     EEAVNLAMGGKIHAIVTAPLNKEALHAGGKPFPGHTEILATLSNTKDYSMMLTSEKLN
                     VIHVTTHVQLRKACDLITKERVATVIDLAEENARILGFKEPRIAVAGLNPHSGENGMF
                     GDEDQKEIVPAIQEAQAKGFNVTGPVPPDTLFHRAANLNEFDIVVVMYHDQGHIPIKL
                     LGFDTGVNVTVGLPFIRTSVDHGTAFPIAGKGTADSRSMTEALYLGAKMANIKYATH"
     gene            31332..32696
                     /locus_tag="PXE50_000420"
     CDS             31332..32696
                     /locus_tag="PXE50_000420"
                     /EC_number="2.6.1.76"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005820549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminobutyrate--2-oxoglutarate transaminase"
                     /protein_id="HDL5621357.1"
                     /translation="MTIKTPIQAVLASNQYFLDRQDAMESNVRSYPRKLPFAYQKAQG
                     VWVTDVEGNEYLDFLAGAGTLALGHNHPKLIQAVKDVLDSGLPLHSLDITTPLKDAFT
                     EELLSFFPKDKYILQFTGPSGADANEAAIKLAKTYTGRGNVIAFSGGFHGMTHGALSL
                     TGNLSAKNAVQGLMPGVQFMPYPHEYRCPFGIGGEAGAKAVEHYFENFIEDVESGVVK
                     PAAVILEAIQGEGGVVPAPISFLQKVREVTQKHGILMIVDEVQAGFCRSGKMFAFEHA
                     GIEPDIVVMSKAIGGSLPLAVLAIKKEFDAWQPAGHTGTFRGNQLAMATGYVSLKIMR
                     EENLAKNAQERGEYLTNALRELSKELPCIGNVRGKGLMMGIDIVDERQPKDATGAYPR
                     DCDLAVAIQKYCFKNKLLLERGGRGGNVVRVLCAVNITQAECEEFIKRFKQSVAEAVK
                     AVRG"
     gene            32786..34321
                     /gene="ddc"
                     /locus_tag="PXE50_000421"
     CDS             32786..34321
                     /gene="ddc"
                     /locus_tag="PXE50_000421"
                     /EC_number="4.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-2,4-diaminobutyrate decarboxylase"
                     /protein_id="HDL5621358.1"
                     /translation="MSNLEKHRQSLFCSDPKSIADYESAMNNAVKAVSDWLKEEKMYT
                     GGSIKELRAKINGFNPTQAGVGVQKSLEHLVEIFLKPSLKVHHPHSLAHLHCPTMVTS
                     QIAEVLINATNQSMDSWDQSPAGSIMEEHLIDWLRQKVGYGKGTSGVFTSGGTQSNLM
                     GVLLARDWAIANHWKKADGSEWSVQADGIPADAMQKVKVVCSENAHFSVQKNMAMMGM
                     GFQSVVTVPSNANAQMDVEALAKTLADLKAEGKIVACIVATAGTTDAGAIDDLKAIRK
                     LADEHQAWVHVDAAWGGALLLSKDFRHFLDGIELTDSITLDFHKHFFQSISCGAFLLK
                     DEANYRFIDYKADYLNSEYDEEHGVPNLVSKSLQTTRRFDALKLWFTVEALGEELYAS
                     MIDHGVYLSKEVEAYINATDGLEMLVPAQFASVLFRVVPQGYPAEFVDTLNQNVADEL
                     FARGEANIGVTKVGEHQSLKMTTLSPIATLENVRALLAQVLAEADRIKDSIVNGTYVP
                     PID"
     gene            34424..34786
                     /locus_tag="PXE50_000422"
     CDS             34424..34786
                     /locus_tag="PXE50_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015586988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NirD/YgiW/YdeI family stress tolerance protein"
                     /protein_id="HDL5621359.1"
                     /translation="MKKVLGLTLMAMALSACNSTASNGSSQANTGVAPANVISVKQAL
                     AAADDSYVTVEGTLLNKVGDETYLFKDATGQIRVEIDDEVWAGQHVGSEGNKVRLYGE
                     IDKGFNKTELDVKTLTVL"
     gene            complement(34876..35463)
                     /locus_tag="PXE50_000423"
     CDS             complement(34876..35463)
                     /locus_tag="PXE50_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDL5621360.1"
                     /translation="MNHLIIYAHPNPSSFNHAILEKTIAASVPNKVVVRDLYQLNFKP
                     ILDWAEFQGTLSKHYEADVAIEHQYWLEADVITLIYPLWWMGFPAILKGYLDRVLSYD
                     FAYRNGEIESIGLLTGKKMQQFVTLGNSNEKYERKGFLAAFEHTLGKGLFEFCGIRDV
                     KMHYFGNIGLKETDYTAILQQITASCSTILKEQAV"
     gene            35639..36187
                     /gene="napF"
                     /locus_tag="PXE50_000424"
     CDS             35639..36187
                     /gene="napF"
                     /locus_tag="PXE50_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapF"
                     /protein_id="HDL5621361.1"
                     /translation="MTDYPNQSLPRRSFLRGQFLDSLKSQKVSQQGYEPIRPPWANLA
                     NFLEKCTACGNCIQACETQIIVKGAAGYPEIDFSRGECTFCEKCVHSCEAEVFRAVSE
                     QPWSHKIEIQAGCLLKLGTECRSCGDSCEMRVIRFRPSLGGIAEMVLNLESCNGCGAC
                     LSVCPTSAIKIQPLQTQANRDE"
     gene            36180..36446
                     /locus_tag="PXE50_000425"
     CDS             36180..36446
                     /locus_tag="PXE50_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone NapD"
                     /protein_id="HDL5621362.1"
                     /translation="MSEKLSEQENWYVCSLVVQAKPEKLEEVKAEILKIPHTEIHGEK
                     TDEGKLVVTIESNVHLALSDRIDQVRDIKGVIVVSLISNYIDEQ"
     gene            36485..38983
                     /gene="napA"
                     /locus_tag="PXE50_000426"
     CDS             36485..38983
                     /gene="napA"
                     /locus_tag="PXE50_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005566990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase catalytic subunit NapA"
                     /protein_id="HDL5621363.1"
                     /translation="MELNRRDFMKANAAVAAAAAAGIMIPVKNVQADDTGIRWDKAPC
                     RYCGTGCSVLVGTKDGKVVATQGDPDAEVNRGLNCIKGYFLSKMMYGADRMQEPMLRM
                     KDGKFDKNGDFTPVSWDQAFSIMAEKIKTTIKNDGPNAVGMFSSGQTTIFEGYAKVKL
                     WKGGFRSNTIDPNARHCMASAAVAFMRTFGMDEPMGCYNDIEKTDAFVLWGSNMAEMH
                     PILWSRISDRRLSDNKVKVVVMSTYEHRSFELADTPIIFKPHSDLAILNYIANYIIQN
                     DKVNWDFVNKHTKFKRGETNIGYGLRPEHKLQQNTNAKTAGKMYDSDFEEFKKIVAPY
                     TLEEAHRISGVPKDQLETLAKLYADPNQKLVSFWTMGFNQHTRGVWVNHMMYNVHLLT
                     GKIALEGCGPFSLTGQPSACGTAREVGTFIHRLPADMVVTNPKHREIVENSWKLPAGA
                     IPDVPGFHATAQSRALKDGKMKFLWQMCTNNMQGGPNINEEIFPGWRNPETFIVVSDP
                     YPSVSAVAADLILPTCMWVEKEGAYGNAERRTQFWRQQVKGPANARSDTWQLVEFSKY
                     FKVEEVWPEELLAKAPELRGKTLYEILYRNGKVDSYQVPTNIPGYMNDEADHFGYYIQ
                     KGLFEEYAEFGRGHGHDLADFDTYHKVRGLRWPVVKDEKTGEYKETLWRYREGYDPYV
                     KAGEEVAFYGNADKKAVILGVPYEPPAEAPDEEYDLWFCTGRVLEHWHTGTMTRRVPE
                     LHKAFPTNLVWMHPNDAKKRGLRHGDKVKVISRRGEYVSNLDTRGRNKCPEGLIYSTF
                     FDAGQLINKVTLDATDPISFETDFKKCAVKVVKA"
     gene            39072..39977
                     /gene="napG"
                     /locus_tag="PXE50_000427"
     CDS             39072..39977
                     /gene="napG"
                     /locus_tag="PXE50_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapG"
                     /protein_id="HDL5621364.1"
                     /translation="MKMDPNRRQFLKNATRTAAGVCGVGMILGLQQQQSFARQGVALR
                     PPGALPEQDFLSACTRCGQCVQACPYDMLHLASLISPVEAGTPYFIARDKPCEMCLDI
                     PCMNACPTGALSEELKDIDDARMGLAVLLDHETCLNWQGLRCDVCYRVCPLIDKAITL
                     EKVHNDRTSIHAKLIPTVHSDACTGCGKCEQACVLEEAAIKVLPMDLAKGLLGRHYRL
                     GWQEKQNAGKSLIEDVHPEGLRPAYDARMPEGLHEPVYQHMEVKPDVKVATPSRATQN
                     YVPNSTTVEAPEHFPDLDLNLKGVK"
     gene            39977..40855
                     /gene="napH"
                     /locus_tag="PXE50_000428"
     CDS             39977..40855
                     /gene="napH"
                     /locus_tag="PXE50_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol dehydrogenase ferredoxin subunit NapH"
                     /protein_id="HDL5621365.1"
                     /translation="MAANSPKNAGLEARQKLGWWHAYRFLILRRLSQLSIILMFLSGP
                     LWNVWILKGNYSGSLLLDTVPMTDPLMTAEVLATGYRPEWTVLVGALIMVAFYGIVGS
                     KLFCSWVCPMNMVTDTAAWLRRKLGIRQTAKIPRNLRYVILAVILVGSAISGTLLWEW
                     INPVAALGRVFVFGLGATLWLVLVVFLFDLLVAEHGWCGHLCPIGATYALIGAKSLIK
                     VKVVDRNRCDNCMDCYNVCPEPQVLRVPLHGKPEESTVILSKDCITCGRCIDVCAENV
                     FAFGMRFQGSIDVKNI"
     gene            40901..41329
                     /locus_tag="PXE50_000429"
     CDS             40901..41329
                     /locus_tag="PXE50_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase cytochrome c-type subunit"
                     /protein_id="HDL5621366.1"
                     /translation="MRKYLAFILAVMSGFAMAEAPKLSGSIDETTESVAPGFHNPQKD
                     VGTIPTTFPFQPPLVPHSIRGLQVSKNVNHCLGCHAIEPSKTTGATRLPPSHFTDRDG
                     KVYENESPRRYFCLQCHVQQTDVNPIIQNKFESVRESQAK"
     gene            41340..41948
                     /locus_tag="PXE50_000430"
     CDS             41340..41948
                     /locus_tag="PXE50_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NapC/NirT family cytochrome c"
                     /protein_id="HDL5621367.1"
                     /translation="MLRRFCNWLRSPSKMAIGAVILISALGGIFAWSGFNAGLAMTNT
                     EEFCSDCHMNDVVPEYRASAHYSNRSGVKAICSDCHVPHEFFPKWQRKIIAAKEVYAH
                     FTGKVDTKEKFEAHRGEMAEREWARMKANSSQECRNCHNFDDMDFTQQKNIAQQMHAL
                     AQEQGKTCIDCHKGIAHNLPHMEAIQKNFIPDDLLKKAEEKK"
     gene            complement(42010..42852)
                     /gene="cpdA"
                     /locus_tag="PXE50_000431"
     CDS             complement(42010..42852)
                     /gene="cpdA"
                     /locus_tag="PXE50_000431"
                     /EC_number="3.1.4.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3',5'-cyclic-AMP phosphodiesterase"
                     /protein_id="HDL5621368.1"
                     /translation="MDAKRMHEYIKLPVTGVIKLLQITDPHLFSNPEETLLNVKTVKS
                     FSAVIEQINKQAKQYFDLVLATGDLIQDNNIAGYHYFAQITNSLNSPIVWLEGNHDVQ
                     PSMSEILAQYKHILPHKQILLGEQWQLLMLNTQVVGMPYGELSYSQLKWLEEKLAQYP
                     QRFTLVALHHNILPTNSAWLDQHSLKNSNELSEIFAKFKNVKAIVHGHIHQQVDDIWH
                     GIPIYATPSTCIQFKPNCDQFTLDLQPQGWREIELHENGTIETVVKRLNSNDFLPNVN
                     AIGY"
BASE COUNT        12978 a         8545 c         9219 g        12268 t
ORIGIN      
        1 gttttagtcg ttatctagga cagcccctac ttttaatact cgtaagcccc cttttgataa
       61 ccctaaagtt cgtcaagcat tgaattatgc ggtgaataaa actgaaattt taacttccgt
      121 ttaccaaggc tctgcaacgc cagctaaaaa cccaatgcct tctacgattt ggggatataa
      181 caacgaagta gccggttatg aatttaatcc ggaaaaggcg aagagcttgc ttaaagaggc
      241 cggattagaa aatggctttg aaacagaaat ttgggcaatg cctgtttctc gcccttacaa
      301 tccaaatgcc cgtagaatgg ctgaaatgat tcaagaggat tggaaagcaa taggggtaga
      361 ggcaaagata gtgagctatg aatggggaga atatcttaaa cgaatgggaa acggcgagca
      421 cgctaccgga atgattggtt ggaccggaga taacggcgat ccagataatt tcctcaatgc
      481 cctactcagt tgtaatgcgg tagaacaagg ctcaaactat gcagggtttt gtaatccaga
      541 gtttgaccgt ttaattaatg aggctgcgac tatcagtgat caaaacaagc ggtcagattt
      601 atataaaaaa gcgcaattca tctttaatga gcaagcacct tggttaccga ttgcacattc
      661 aacggtgtat tttccggtaa ggaaagaggt aaaaggctat gttgtcagcc cgtttattgc
      721 tcataatttt tatggtgttg agctggaata acctaaggta taatgaattg aactcatttt
      781 gtgcctcata aatttaggag caataaatat atgttagcga aacttaagtg gaatcaatta
      841 gcttgtgtaa cattggcatt ttgttcagcc tcagtatttt cagcccatca cgaaatcaaa
      901 atgttagata acaatgcgga aggatcaatg gtatttgagc ccggttatgt aaaagcagag
      961 gtgggcgata cggtaacatt tattccgtct cataaagggc attgggttga aagccgctcg
     1021 attccggaag gtgcggagaa gttcttatct aaagaagatg aggaatttac tattaccctt
     1081 actcacgaag gtgtttatgt ttactactgt ccgccacacc gaaccatgaa tatggccgga
     1141 attatccaag taggacaagc tctcaatctt gaagccacac aaaaagaagt ggaaaaaatt
     1201 gaaaaacgca cgaaagaaaa taaaggacgt ttatttgaat atttagagca agttaagtag
     1261 aagtgattta attttgcgat ctgcatcgaa aaatcaatat ttaatagttt acaaatgatg
     1321 cttaaattct aagataccct ctatcaatga gggtattttt atgtataaag ccatcacatt
     1381 aattgaaata ctaaccacta tcactattat ggtgatcgct gtttatttta tctcgccggt
     1441 tatttttaca ctgcaagatc gaattgcact tcatagtgaa attgaaaata tccaatcttt
     1501 tattcagcaa atccaaacta aagcacgtta taccaaacgt aattatacct taaccctttc
     1561 tcagcggaat aatcagtggt gtatgattgc ggtaattaag ccaatcaata ctagcaaaca
     1621 aattatttgt gattgtttga ataaacattt ttgtgattta ggaaaagaat atcatcttta
     1681 tacgccgact catcagcaga ttgtattaaa aaataaaagt ttatatccga aatcctttat
     1741 taatgttgat ggggtaagtg gtcaattaga atcaaaatgt attaagctca gtttaaataa
     1801 agaaaatgaa attttgcaat ttgaacaatt aggacgggtt tatgtggcag caaaaaataa
     1861 acgtagcacc tgcaaagatt agtttatctg cttttagcct aattgaagta ttaatggcta
     1921 gtgcattagg ggcgttttta ttattgcttg ttgcttcaag ttatgccgat ttctattaca
     1981 cacaaaccaa acaaaaagaa cagctctact tgcaagcaga agctcaccag ttactaaact
     2041 acttccaaca gcattttcaa cacattggct atcaaggctc tcacagaaca gacagtaatt
     2101 ttgatttatt tcagcaagca gggaaaagcc tgaatattgt gcataaaaat tgcattattg
     2161 gattttacga tttaaaccaa gatggctgtt tgggaaaacg taagacaaaa acggccgctt
     2221 gtaagttagg aacagtgaat aataccagag aggtgttaaa agaaattgtt ggctttaaag
     2281 tagaaaataa tgaaatttat actttttcat cgcaattaga taattgtgtg aaagaacaat
     2341 gccaaacatt attggaaaat tgcgatggaa attggagtaa atttaccgaa gcaaataatt
     2401 tcaaaactaa gaaactggat tttagttgga gacaggaaga taacttatta aaaattgagt
     2461 tagaaataga atcacctaaa caaaaaggat tgatttatac ggcagtacgt tatgttttta
     2521 tcttaaataa tacgaggtaa aagtgaataa atataaaaat gccagtgcat tattggtttc
     2581 attaatactt atttctacaa ttttgtcggt tttattttta agtaaagaaa aatggcttgg
     2641 acaacaaaac attacccatt tttatagaga gaaatacctt tccgatcaat ataatttttt
     2701 agcgttatat ccacaagata aaacgcaaat atgccaaaaa tttcaaaaag agcagatcag
     2761 ccaagcggat ttatccgata aacaattcag gtttttacag tatcaatttg cctgccaatt
     2821 ccatagttta tttaaagata aaaaaccgac taaagagaaa tatattcact ttacccattt
     2881 ggcggattat ttagatttat caaatgtgcc aaaccaagag atttatacta ttcattcttt
     2941 agctgaatta cctagtagca gtgaacgtga gcctaaaatt gtgcttgcta aaaacgcaat
     3001 taatgaaaac ttaccgcaag agttttacgg cattgtgata accgactatc tgtttgatat
     3061 taccggcaaa aaaatgtacg gcacgcttta ttcctcttat gataatgccc gagaggagcg
     3121 aaatttaacg tttaaaaaag aggtactggc agagcttgag gcgaggtatt ccgcttggcg
     3181 atatttgcca tattccgaac atttgatggg agcggttgat gattaaatat aaagcagaaa
     3241 cggctttgtc gcttttggtt gccatcacgc tatttgcgat tgtggtgttg agtttcagcc
     3301 agtggcaatc ggcacaaaac cacaggctaa atcaacattt ccaacagcaa caagcggtta
     3361 tgattttaga aaatcagctt gccctcaaat tagccgggtt agattgtgaa tcaagtatta
     3421 ctcaaaatca gattcgctat cagattcaat gctctggcaa tcgcttaacc attcgctttc
     3481 cgttaggcaa aattgagctg aataatgatt gaatcgtccc tcgctttgga ggacaataat
     3541 tcaattagcg aggcgttatt atgtttacac tttaccaatc caaccaaatt tcatcactgg
     3601 cggagatgct ggtgaaaatc cagcaggtaa acccacttga agatccgttt gagccggaaa
     3661 ccattttgat ccaaagtcag ggaatggcac agtggctaca aatgcagatt gctgaattaa
     3721 acggtgtgat ggggaattgc gattttctct accctactac atttttatgg caacagtatc
     3781 ggctgttgtt cccggagctg ccgaaagaga atatttttga gcgtagttcg ttggtttggc
     3841 ggattatgcg gttattgccg agttgcttga cactatcgga gtttgctccg ctaaagcgtt
     3901 atttaggtga tcaacctaat aaagaacagt atcagcttaa gctctatcaa ctttctgcca
     3961 aaattgccga attgttcgac caatatttgg tgtatcgccc ccattggctg gttagctggg
     4021 aagagggcaa cttacaagcg atcgaaaatg agataaaaat tgcaactgcc gctaagccga
     4081 ttgattttga cttaattcga gccgatatga aatggcaaag ccatttatgg caacagattg
     4141 tatctgatct gcaatcggaa tctgatgagc aggtttttac tacctcccac cgtgcctatt
     4201 tgcaacaaaa ttacttcgct aagttagatg accttactga aacggaaaaa gccaaattgc
     4261 caaaacgcat tttcattttt gggatttcgt ccttctcgcc attacagtta gcggtgttta
     4321 agaaactcag cgagcattgc gatattcacc tgttcttttt taacccaagc gaaaaatatt
     4381 ggggcgacag tgtggaagaa aaagtgtggc aaaaattggc gttaagccac aagatttcgc
     4441 aagacgatct ggataactta ttggcggagc aaagaaataa actactgaat ctttggggca
     4501 aacaagggcg ggatttctta gctcaattaa tcgaatttga gccgaatacc atggatgtct
     4561 ttgtcgaacc agaggaaaac agcaacctca ataaactcaa aaaacagatt ttcagcttag
     4621 aaaatgacgc cactattacc gatttaaccg ccgataattc actccaaatt cattcgtgcc
     4681 acagcccaat gcgggaagtg gaagtgttgc ataaccagct cctgaatttg tttgagcaag
     4741 atagcacttt gctgccgaaa gatattattg tgatgtcgcc ggatattaat aaatacgctc
     4801 cttacattga tgcggtgttt tctcgctaca atacgggtaa tcgggatcct cgctatattc
     4861 ctttttcatt atccgaccaa gcatttacgc aggttgatcc gattatccac agtttcctgc
     4921 aactgctggc aatgaaagaa agcccgttta atgccgaaga actgtttgat ttactggaag
     4981 tgaatgcgat ccaaacccgt tttggcttta gtacggaaga tattcatacc ctgcgggttt
     5041 gggtgagaaa tgccggcgta cgttcgggtg tagaaatcga gcaacctcac tggcaaaact
     5101 acaattcgtg ggaaaacggg ctaaaccgtt tattgcttgg ctcaagcctg aaagaagagc
     5161 aggggatttg ggaaaacacc cttgcctttg gggatagcta tggcttaaat gccgagctgg
     5221 tggggcgact tgcctctttt attgaggctt tattagcgtg ggtaaacttt ctgcaaacgc
     5281 cacagccgtt ggcagcgtgg cagcaggcaa taaaaaattt gactgctgat ctgtatcaag
     5341 aaaatgccga aaatgctgca tcaattttat tgttgaataa tgtgaatgat cagattatcg
     5401 agcaaatttc cgcaacccat ttttcagacg atctgcaaat tgaggtttta gccttattgt
     5461 ttgagcagca gctcagccaa cattcacagc agcttaattt cttggtcgga cgggtgaatt
     5521 ttgccacctt gcttccgatg cgggcgattc cgtttaaggt aatttgcttg ctgggtatga
     5581 atgaggcaga tttccctcgc caacaacaaa tcaatagctt tgatttaatg cagtacgccc
     5641 cgaaaaaggg agaccgtgcc aaacgtgatg atgaccgcta cttgttctta gaagccttac
     5701 tttccgctca gcaaatgttt tacatcagct atatcgggca gtcgcaaaaa gacggcaaag
     5761 agatgctacc gtcgattttg gtttcccaac tgttagatgc aatgaatgaa gctttaacgc
     5821 ctgaatgcaa gcaacaatta agcgatgaag tggaagtttt ggtcagaaaa caacctttaa
     5881 gtgtgtttag caaaaagaat tttacccacc cacgagatca cgcttataac gcagagtgga
     5941 ttatcaagcc gactgttgcc gtacaagatt ttcttagtga gcctttaacc aatgaaagcg
     6001 tggcttcgct agaacttgat gaattaatct cttttgtaca aaacccgatt aggtttttct
     6061 ttctaaaagt gttggggatt tcgtttaaca cttatgatga caccattgat gaaagcgaaa
     6121 tttttgagat gtcggggctg gataactacc ggattttaaa cgaattatta acgataaatt
     6181 tagcacaaca gcaacgtttt tttgccgaag agcaactcaa aggcaattta cctgcttctt
     6241 attttgctca aattgccaca caagatttga tcggcaaaat taccgaaatg caagcggcgt
     6301 taagccacta tttagccagc gaaagccgta ttttgagtgt taatcgggag gttgagctgg
     6361 aacgccaaac cctcacccta aacggcaata ttgccaacct atatcagaat gaagtggtgc
     6421 tatggcgagt agggcattta cgagataaag acaagattca gacttggatc taccatttat
     6481 tattgtgtgc ctatttccct gaaaaaacgg tgaaattcta ttaccgagag ggtgagcaag
     6541 ttggtgtgtt gagctttgaa accgtctcgc agatagaggc attatcgcaa ttaagcattt
     6601 atttgaatgc ttatttggac ggattatcgc aagcccagtt agtgatctac gaccgaattg
     6661 aggaatatct caaaggtgat ggcacaaaca gcgaacaagt tcttatcgat ttagcagaga
     6721 aagatgagcg agacggcagc tatctccatc ggcttctcgc tcaaactaaa gagctggatt
     6781 ctcaagcgat tcaccaacgt actcaaagct ggtttagctt aatgaatcag aaaatagcga
     6841 aaggcgatta actacaagcg gtcgtttttg gctgaaaatt tgcaaaatga gaaggcgaat
     6901 aataattcgc ctacctataa aaatagaatt ttttccgtat tttactgtca atttattact
     6961 acaatgctaa tttcaaaagg agatgtatga aattatcttt tcttacccaa ttcgttgcag
     7021 cggcttttgc cctcaatgtg atgacttacc ctgcatttgc ggaagttgca aaaaattctg
     7081 aaaaaacgac cgctagtcaa ccccaatccc aactcggttt tgagctgatt aaacagagca
     7141 ttaacaaaag cccgaatgat aaagcgattt atcaaggtat taaacttgat aatggaatgg
     7201 aagtgctact gatttccgac agtcaagcga ataaatcgtt gatgtctgcc attattccga
     7261 ttggctcaat ggatgacccg atttctcagc aaggtttagc ccactatctt gagcatatga
     7321 tcttgatggg ctcgaaaaac tatccggaaa ccaacagctt agacggtttt ttaaccaaaa
     7381 atggcggtat gaataatgcc tcgactgctt ctcaccgcac ggcgtattat ctacaagtca
     7441 ataacgaagc ctttagcgaa gcggtaacac gactggcgga tacgttagct ttcccgttat
     7501 tgctggaaac caacgccaag aaagaggtta atgcggtcaa tgcggagatg gtgcgagcta
     7561 aatcgcacga tgggcattta ttgcacagtg ttaatttagc caccgcaaac ccggctcatc
     7621 ctgctaccaa atttgcggta ggcaataaag agacgttatc tgacaagccg gatagcaaat
     7681 tacaaaccga gttggagcaa ttttataaac agcattattc tgcgaatctg tttaaagtgg
     7741 tgctttattc caatcaatcg attgagcaga tggcaaaatt ggcagccaac actttaggca
     7801 aaatggaaaa caaacatttc agcataccgc aaaccgctga gccacgttat cgtgatgagg
     7861 acaaatcggt atttattcaa tataagccgg tgaaatccaa caaaatgtta gtcattggct
     7921 ttgattttcc gaatgacgaa atgcagttta agcacaaaac cggtaaatat attgcttata
     7981 tgttaaacaa taatactgac ggcacgcttt cggattactt gattaaacag gggttgtctg
     8041 acggcggtat tgaggcggtt agcagtgcca atatcgggcg ggatcgaggc tcgtttgaca
     8101 tctatattga actgacagac aaaggtttga gcgagcaaga tcaaattatt tcattggttt
     8161 tccaacaaat tgagaagatc aaacaagaag gcattcaaga gagctatttt agcgaagtga
     8221 aagagagcct gaagcaggat ttccaacatt tgcaagtgga aaaaaatatg gatttcgtgg
     8281 aatttattgc cgatcaaatg ctccatttcc cgttagaaca cgttatcgat cagccttatc
     8341 tgaccgaaac aatggataac gaggcaatta aagcaaaatt ggcggcaatg aatattgata
     8401 atgcccgcat tatgttagtc agcgatactg ccaaaaccga caagaaaacc ccttattttg
     8461 aagcaggtta ttcggtggca aaaatcacgc aagaacaaaa gcaaaaatgg ctggatttca
     8521 gtaaaaatcc acagctcaat ttgcctgaat tgaacccgta tttcactacc gattttacct
     8581 taaacaaggt cgaaaccggc ttaactaaac cgaaattgat taacgaccaa gcggggaatt
     8641 taatctatac aatgccgagc gtgtatttta ccaatgaacc gaaggctaaa atcggcgttg
     8701 gctttaatat tcgcccgaga aaagatgact taaagagcct gaccgcagcg tctattttgg
     8761 gttatatgaa caatttagcc caaaccaagt tagattttca gtcttcggtg gcgggtatga
     8821 atttaagttt agctccggcg gcaaacggtt tagccttaag tgcagagggt tatacccaaa
     8881 atctggctaa attaatgcta gacagcgtaa aacagttcag ccgctttgag tttaacgaag
     8941 acgtgttggc acaggctaaa caacgtttgc accaagagct ggatcgtaac gaaaaagaaa
     9001 acagccttaa tcaagctaat gcagcattaa gccgttttgc ctcttaccct tattttgatg
     9061 tgccgaaaca gcgtgagatg attgatagca ttacccttgc ggatattgag caactacgcc
     9121 agcgaatttt gcagcagagc agcggcttta agttgttatc ggtggggaat ttgtcggctg
     9181 agcaggtttc tgctctggca gaggatttac aagcggtcat aaaaaaccaa aaatctgcaa
     9241 atgctaccgg acagtatgtg gatgtgagta ccagtcagcg taagattaat gtgattaaaa
     9301 gcgtgccgaa tgaagataat gcgttgctaa tggcatttat gccgaacggc tataacgagc
     9361 tggaaagcct tactcgagcc aaattgctca gaagcattat ttcccgttgg tattttgatg
     9421 atttgcgtac tgataagcaa ctaggctatg tggtttatgc gacagataat atcatcggga
     9481 aaaccgccgg tatccagttt atggtacaaa gcccgaatac cacaccggca gggattttag
     9541 agcataacga acgtttcttt acacaaagtt tcgaacgttt aaaaaatcta tctgatgagg
     9601 aatttggaaa atatcgtgat agcctagtgg aaaaactgca atataaaccg gagtctttag
     9661 cggaagagtt ttctgagttc ggttcagact ttagcagaaa taacccgaaa tttgaccgct
     9721 tgcaacaggt gatcgaatta accaaagcac tcaccaaagc agatattgtg gcattttacc
     9781 aaaaagctgt gattgaaaag caaggcttcg tgtttgtcag ccaagctgtc ggcaccaaaa
     9841 ccaaagctga agacgttgcg aaatttgacg gttttgaaca gatcgaaagc attgaaaagc
     9901 tacaacgaga gtttgagatt aaggattatt agagagttat tagagagagt taggggcgaa
     9961 aaattttcgc ccctcatttt ttaatccaca attttcaccg gatataagta agtatatccg
    10021 aacggacttt gtttgtagcc ttcaacacgt ttgctggttg gggcaaagtt aattgagtga
    10081 gccacgttaa tccacggagc ttgctctctt aagataacct gtgcctgctc gtataactta
    10141 gtacgttctg ctttatcaga tgagcctaat gctttttcta ataacgcatc taactcaggg
    10201 ttagtaaagc gagcatagtt actgttgccg atatttggcg tgccgaatag tggcgataag
    10261 aagttatccg gatcgccgtt atcgcccgac caaccgtaag ttccggcggt taattcaccg
    10321 gctttggtac gcttgatgta atcaccccat tcataggtga ctaattttgc ttttacgccg
    10381 attttttccc agtcggcttg aataatttca gacatacggc gtgggttcgg gttagaagca
    10441 cgcaccacag gctgcaccca taattcggtt tcaaaaccgt tcgggaagcc tgcttcagct
    10501 aatagttgct tcgctttttc cacgttatat tctgaatccg ctaagctgtc gttatagccc
    10561 caaatggttg gcggaagtgg gtttttcgcc gcaaaaccgt taccttggta aactacatca
    10621 ataatcgctt ttttatccac tgctaagttt aacgcttggc gaactttcac gttatcaaac
    10681 ggagcttttt cggtattgaa tgccacataa gcaatgttca aacccggttg agaaagtaaa
    10741 ttgattttcg gatcattttt cattttctca atgttggttg catttgggaa gtccattaaa
    10801 tcacattgac cggattgtaa tttcgcataa cgggttgttg catccggcac gatctcaaaa
    10861 atcaaacggt caatgtcagg cttacctttc caatactctt tgtttgctac ataacgactg
    10921 gcttggtcta gcacataacc gctaaacaca aacggacctg tgccgattgg cgtggtatct
    10981 accgcttcag gtatgccggc tttcatcatt ttatccgcat attccgccga ataaatggag
    11041 gtgaaatcca taccaaggct ggataagaat gacgcatcac gtttggttaa ggtaatacga
    11101 acggtgctgt cgtccacttt ttccaccgat ttcaataatg tcgggaattt cattgcgttg
    11161 aaatacggat aagtgccgtt agagacggtg tgatacggat gatttttatc taactgacgg
    11221 ttaaatgaaa atactacatc gtccgcattc aattcacggc ttggagtgaa gtctttgttt
    11281 gaatggaatt tcacgccttt gcgtaattta aaggtgtaag ttaagccgtc ttcgctgatt
    11341 tcccagcttt ctgccaatgc cggttcaata tcggttgtac ccggcacaaa ttccaccaag
    11401 cggttgtaaa tttgttgcga gctggcgtta taagataaac cgtccatcat taaaatcggg
    11461 ctaaaaccgg ttggcgaacg gctaacgcag tttacaaagg ttttctcggt ttgcggtttt
    11521 gctgctgccg cagtaggttt attttcgttg cttttatcat cgcaagccgc tagagctaat
    11581 accgctaaaa cgcttgcact aattttggtt aacgttggaa atttcatatt attctccgct
    11641 taatcttagg attaacttac gaagattacc ttttccacaa tgaggagtaa agaacaaaaa
    11701 gcattatttt tgcaaatcaa tccatagaat tagataccgt caacgtcatt gccacccgtg
    11761 atccaagtaa atttgccgat acgccacaaa aacaaactaa agatgcactt ttggtaaaac
    11821 aagcgacgag tgtggcggcg gcattaaaag cgttgccgaa tgtggatgtg caaggagggg
    11881 cccgtgcgat tgtgcagaag ccgtctattc gtgggttgag cgataatcgt attgtgcagg
    11941 tgattgacgg agtgcgtcag aattttgatt tggctcaccg tggttcttat tttgtgccga
    12001 tgtcattgat tcaagaaatt gaagtaatca aaggtccaag cagctcgttg tgggggagcg
    12061 gtgccttagg tggggtggtg gcaatgcgca caccgaatgc gttggattta ttgaaaaata
    12121 atgacaaatt cggggcaaaa atccgtcaag gttatcaaac ggcgaataat ctttccgaaa
    12181 ccgaagcctc ggtgtttgca gcaaatgatc ggtttgatgc cctgctgagt ggtttctaca
    12241 ataatgctga caatttgcgt agcggtgaag gcaaggaact gaataacacg ggctataagc
    12301 aagccggcgg tttagtaaaa ttcggctggc aaattaacga tactcatcgt ttggaattat
    12361 cccatcgtca tagccaattt aaacaaactg caccgggtaa taacgaggta gaaaatcaat
    12421 ttaccgataa tgatgttagt gcacaaatta gtgcttggca tgcggctaat cctggaaatc
    12481 caagtaatcc agtatatctt gcgaaaatgt tagcctttta cggtcaatta cattcaagtc
    12541 ttggtagtgt gagttattta agtgatcaaa aaattaccga taaaagcacc tcacttaact
    12601 actatttcaa cccaagcaat ccttatttga gcacacaagt gacattatat agcaatagta
    12661 ccactgaaaa cgaacatcga aaaataagtg gtgtggaaga tcaaactaaa ctaagcactc
    12721 gtggtgtgaa tatccgtaat cattccgaat tgtcttggtt ctccttggtg tatggcgtgg
    12781 attatatgtt ggataaagta gccactcagc gtgggagaaa taatacggac gcacaatacc
    12841 gtgctaatcc ttatgatgct aaatctaaaa ctacaggtgc ttatttaatt gcacatattc
    12901 cgctgtttga tgaaaaagtg gtcttttctc cgagcgtgcg ttacgaccgt ttcgatactt
    12961 caagtgaaac ggtgaaatat aaagacagcc attggtctcc tgctgcaaaa cttacttgga
    13021 aagcgacaaa ttggttggat ttaaccgcga aatataacga agctttcaga gccccttcta
    13081 tgcaagaacg atttgtgagc gggtctcatt ttggtaccac agtgagagga ttacctatta
    13141 ataatatttt cttaactaac cctaatttac gcccggaaac ggcaaaaaat aaggaagtaa
    13201 ccttcaatgt acattttgat aatgtcatct cgcaaggaga taaatttaac tttgaagcga
    13261 cttatttccg taatgatgtg aaggatttga ttaatcttca agtattcaaa gcaaatccta
    13321 caagcccaat ggaatttatt cccactcgtt cccaatatca aaatattgcg aatgcacgtt
    13381 tgagtggtat tgaattacaa actcgttatc aaactgaacg tttggcagtt tttgctaact
    13441 acggtagtac aaaaggtaaa gataaagaca gcggggaagc cttgtcgaac attgctgcaa
    13501 gcaaaatcgg cttcggggtc aattatgccg tggtgcaaga caaattcacg gtgggggcaa
    13561 acgtaacccg ttatcaagca caacatcgtg tgccgaaaaa ccacggcgtg acttaccaag
    13621 gctatacgct gaccgatcta cacgccactt acgccccatt aaaaggcgaa tggaaaaacc
    13681 tgcgtttaga cgtggcggtt gaaaacctat tcgataaaaa ataccaaccg gcattcagct
    13741 taatggaagg cagcggtcgt aatgtgaaac tcagtgcggc ttacagcttc taatgtcttt
    13801 aacggaagac ggcacaagcg gtcgttttcc ggttattttt tgcaatatta aaagggagtt
    13861 actatgaaat tttatccgtc gctgatcgca agtgcggtca gttttgccgt tgttttgagt
    13921 ggacaagcgg cagtgaatgt gccggatgcc ggctcgttac agcgtgaatt agaccaacgt
    13981 caagctcaac aaaaagtcaa accgagtggc gaatggttta atcaagcggc aaaagcacct
    14041 tataccgcaa cggacggtca agaactgaca tttccattaa ctcaggtaca agtttttgat
    14101 cgaaccaacc aagaaatctc taccccggaa ttagccccga ttttggcaaa ctatgtgggt
    14161 aaagcggttt cgctgaccga tttaagcaac ttggcaaatg agatcaccga gttttatcgt
    14221 agccacaatt atctggtggc aaaagccatt ttaccgccac aggaaattga acaaggtaag
    14281 gtgaaaatcc tgttgtttaa aggcaatgtc ggtgaagtgc ggttacaaaa tcagagtgct
    14341 ttaagcgata aatttgttgc acgccttgcc aacaccacag tgaatggttc ggaatttatc
    14401 ctaaaagacg aattggaaaa atttgccctc acgatgaatg atgttcccgg ggtgaatacc
    14461 ggcttggagc tttctgccgg taagcaagca ggcgaggcga atttgctgat taagctccaa
    14521 aatgccgagc gtttctcagg ctatgtatcg gcagataacc aaggcaataa aaataccgga
    14581 cgttaccgtt tagccacagg gataaaagcc aataatctga taggttgggg cgatgagttg
    14641 aaagtggatt tgatgagttc caacaacgct aatttaaaaa atgcgcgttt ggattattcg
    14701 agcttgattg acggctacgc tacccgtttg ggcttaacgg cgaattatct cgactacgaa
    14761 ttaggcggta actttaaagc cctgcaatcc caagggcata ctcacaatct tggggcttat
    14821 gtgttgcacc cgacaatccg cttgccggat tttcggttaa acaccaaagt cagctttaat
    14881 catcaacgtt taaccgacaa acaacaagcg gtcaatgtgg cacaaaaacg ccaagtaaac
    14941 agcttaacgg tgggcattaa cgggtcgtgg aattcgctta aagacggcac aagctatttc
    15001 tctctgtctg ccttgttcgg caatttagct aaccacacca acgagcaagc gcattatgtg
    15061 gcaacagatt ttcagcccaa atcccgtttt acggtctatc aatacagcct gtctcacgaa
    15121 caagcgctgc caaaatcctt tgccttcaac cttggcgtga acgggcagtt tgcggataaa
    15181 accctcgaca gctcacaaaa aatgttactg ggcggtttat acggcgtgcg tggtcatcaa
    15241 gccggtgtcg cttcggtgga tgaggggcat ttagtgcaaa ccgaactcaa gcattattta
    15301 ccgctctttt ccaaaagcct gctgaccagc tcggtcttct atgattatgg ttggggaaaa
    15361 tactataaac acagcggatt tttggcgcgt ggtgtaaaca atagcgtgaa attacagagt
    15421 atcggagcag ggctttcgct ctctgaagca ggcagttatg ccattaacgc cagtgttgcc
    15481 aaaccgctgg gtaaaaaaat cgagaatgca gataaacacc aattctggtt ctccgccatc
    15541 aaaaccttct aaggagacaa actatgttta aacgtaatgc aatttctctc tgcattttga
    15601 ccgcttgcag cggtttagcc tatgccaata cagcagattt gccgcaaggt gaaagggtgc
    15661 gtgtcgggac ggcaacgatt gagcgcacaa ccgataaaat gaccgtgaat caatccagca
    15721 ataaagtaca aattgattgg aacagctttg atattggtaa gaataaagaa gtggaattca
    15781 aacagccgac agagatggcg gtggcatata accgtgttac cggcggaaac gccagtcaaa
    15841 ttcaaggcaa gctgaccgca aacggcaaag tgtatttagc caacccgaac ggtgtactca
    15901 tcaccaaaga tgcggaagtg aatgtgggcg gtttgttagt gaccacaaaa gatttagaaa
    15961 aaatcagcga aaacggcaca aaagataaat tcagtcgcaa attagcgaaa gaaggcaaaa
    16021 ttcttaacca aggtaaaatt acggccaaag gcgagcgggc ttttgtggta ttggtgggcg
    16081 acgatgtggc taatgaaggg gaaattaacg ccaaaaatta ttaccacaaa gaaacgaaaa
    16141 aagtcaccga atgttatgac gattcttgga gcttggtaaa acaatgctac gattttgata
    16201 aagaaatcgt gaaaagtacc agtggagaag tgcatttatc ctccggagaa aatgtcacct
    16261 ttactttaag cgaccgctat attgatgtgg cgttagacga taatacggtc aatagcatta
    16321 tcaaaaatga cggggcaatc atcgccaatg gtgacattac cctcactgcc aaagggcgaa
    16381 atcaagcctt agacagctta attatcaata acggcgtatt gcaagccaat aaggtgcaaa
    16441 ataaaaacgg tacgatcatt ttatctgccg gtgaaaccca attacacgaa aaaagccaaa
    16501 ttaaaggcga gaaagtgagc tttgccgaag cttcttatta cggtccgaca gaagacatta
    16561 aagtggtttc caaaaccggc tcaaaagtga ccgcacctgt gatcgatttc aaaggtaaaa
    16621 ccgtgaatat tcaaggggaa tttgggcgtg aagacagcac cgatctctat aacgatgaac
    16681 tacaaatcct caaaaccacg gtgaatattg aagtcccgaa tacggaagat attcgcattg
    16741 cagataccga caacggaggt agcggttcct ttatacaagc gggtgcttta gcctcattac
    16801 ttgcaaataa cggacgggtt aatgtacagg gcaaaggttt tgatgtctca ggcaagttga
    16861 atgtgaatgc ctttaaacaa acggattccg tgctgaaatt tatcaatcag gcgggcatca
    16921 atatccacaa tgccgatatt cacgcaaacg ggcgtttatt ctttgtgaca aacttgccga
    16981 atgacaccga tttccaatcg aatatccgca ttaccgacag caaaatcaac ttaggcaacg
    17041 gctcaatggg ctttggtcgc agtagcaaac gttgggaaat gcacgatgtg gttcgacgtg
    17101 ccgatacgga actgcgtaaa aaattcaatc tggatatgaa aaacgtggaa ttaaaccaag
    17161 tggatgattt tgtggtagcg ggcggtttcc aacaagttaa tttggataac gtgaaagccc
    17221 gtggcaaaac caacttctat ctggattccg gcaactcccg catgtttgtc ggtgagcaga
    17281 tttatgaata tggcgtaacc gatattgaaa aacgcaccca attggcgaat ttagaccagc
    17341 gtagaaaacg ttggaattcg gataactatg atgagaccga tctcaactgg gaatacaacc
    17401 aacgctttga cggctttgca gcaaaacaca atcaccgcgc gccgattgcc gatacggaaa
    17461 tcaatattgc caatagtgat atcagcttag ataacggttt tgtgcattta atggcagaaa
    17521 aaatcaatct ggacgacagc aaaatcaata tcaccttcaa ccaagacaac agcttggatg
    17581 aaagtaccca aatcaaccgc ttaggactaa acggcaaagt gtcgatgaaa aacagccata
    17641 ttaacgtagt gggcgatgaa aaagacggta tctcaccggc tcgccattat gccacgatgt
    17701 tcttagtggg ggagctgctt ggtgaaaaga gttctatttt cctcaaatcc caccaaggtg
    17761 cagtattgag aaccgacagc aatgttacaa ttgccggtaa aaacagcaaa gacgacctca
    17821 aaattaccgc cattaccacc ggtaaaaaaa tgggcaatga aatcatcgga ccggacggct
    17881 tgccaacctc ggaagataac gatgccaacg ccagcaacac cgcctttgcc atcggctatg
    17941 aacctaacgc tacggctatc gtcgaaaatg caagcattac cgcattagca ccaaacggcg
    18001 gcttggcata caccggcacg tctaaaaccc aaattgacgc gaaggataat gctaccttta
    18061 ccttctttga aaaacctcga gccggctatg acaaattgct tggcgacatc aaaggtaacc
    18121 ccgataaatt aaccccacgc gatttcgccc gtttatacga caacattaaa ggcatcaaag
    18181 ccagcagcct atccgaacaa cagcttggcc tagcagacac cgcgaagaaa accagcgaac
    18241 acaccttagc aaacagccta gacgtagaaa atttggtttc agtgacagtg tgtgatgagc
    18301 agaataagtg tgaggagcgt atgttaggta acaaaaatac caatgctaaa gttattgtcg
    18361 gagatatcaa atttgagtag cgttgaagaa agtggtagaa gctcagactt gatctgataa
    18421 agcactataa aaagtgagag tttcccgttt agaatatgag tgtcaaaatt caatctaaac
    18481 aaaaaggaaa ctctcatgtt ttattactta caatcccctc attaaacaca agaccggttt
    18541 attaaattta gcagaagaac cgggcaatat ctctcaagcc tgcaatgtgg tgggtatgag
    18601 cctagataca ttctattgct atcaacaagc ggttattttt ggcaactaat ttgcaaaaaa
    18661 acaataaaat ccgaccgctt gtagagggtt aatccgccct tagtgaaatt tcaccgatgc
    18721 cgaaatagcg gaggttgtcg ccctgtttta gaatgagttc gccctgctcg ttaatgcctt
    18781 gcgaaatgcc gtggatttct tcggcttcgg taatgagctt aaccgcttta tggcggaaaa
    18841 ggtcgaaact ttgccagcgt tcggcataat gagcgaagcc gacaagcgga taaattttga
    18901 gatttttttg caattcatag gctaaacggc aaaccaattc gttgcggttg aaatgatatt
    18961 gcgataaatc tgcccacgct tgcgtcacaa tattttcatc cacttttgcc attcctaggt
    19021 tcagcccaat gccgataacc acatctaaac cattgcgatt ggcttgggtt tccaacaaaa
    19081 tgccccccat ttttttgcct tggtaataaa tgtcattcgg ccatttaatt tgaatatctt
    19141 ttacattttg aacagtaagg ctttccgcaa tgatcaaggc taccactaaa cttaagggcg
    19201 gtaaatctgc cgcctgctcc atcgggtaat gccataaaat cgagaaatag agattttcac
    19261 tctcgggcga ataccaagtt cgacctcgtc tgccacgtcc ggcagtttgt ttttcagcga
    19321 ggcaaaccgt gccgttttcc aaacgttggt gatgagtgag caaatattca ttggttgaat
    19381 caatttcatc gaacacaacg gcttgcccgc aaattaaagc attttggatt tgagcttggt
    19441 taagtttcat tatttcccca cttagcgagt gattttttcg ctatcgacct caccgttttt
    19501 accgataaaa cgcacttcag gctgaatttc taccccaaat ttttctttca ctctctggcg
    19561 aacggttttg gctagagcca agacatcttg ccctgttgca ttttctttat taatcagcac
    19621 taaggcttgc tgggtatgta ccgccgctcc gccaatttgt aagtctttca gcccggtttg
    19681 gtcaattaac caacctgcgg ctaattttac cgttccatca gcttgagggt agtgaggaat
    19741 ggctgggaat ttggcttgta ttggtgcaaa ttgttcgttt gaaatcaccg gatttttaaa
    19801 aaagctgccg gcattgccaa attcgtcagg gtttggcaat ttggaggagc gaaccgcaca
    19861 gacttcatca aaaatctgta ttggcgtaac ggtttccgga ttgagttggg ctaatgatcc
    19921 gtaacttagc accggtttcc acgctttggc taactttaag cctaccgaga taatcgcaaa
    19981 ttcatcacgg tattggtgtt taaacacact ttcacgatag ccaaattcgc actcggattt
    20041 ggatagctta aagagttctc cggaacgtaa atttaacact tccacgaaat cacatacctg
    20101 ttcaaattca accccataag ctcctatatt ttgaatggga gcagagctgg cgacacccgg
    20161 aattaacgcc agattttcaa tgccggcaat attgtgtgcc aacgtccatt taaccaattc
    20221 gtgccagttt tccccacctt gaacgtgcaa atagtggaaa tgttcgtctt cgtggtgcgt
    20281 aatccctttg agtttattta ctaacaccac accgtcaaaa tcctctaaaa acaaaacgtt
    20341 agagccttgc ccgagaatca agattggcag ttgagcgtta aaggcttttt gccattcgct
    20401 caatagctgt tcgactgtgg taaattcaat aatttgggtc gcttttgcag gcaaatggaa
    20461 agtgtgaaaa ggggttaagc tatgtttcat catcaaatta gttagttaag aagtggaaat
    20521 aacaagcggt gatattttta caaaattttg caattaagat tttgggcagg cacaggatct
    20581 gcccctacat tcagaattac cttgccccat ataccacaat ggttttgccg tgagcagaaa
    20641 ttaagccttc gtcttccaac atttttataa tgcgtccaac ggtttcacgg gaacaaccga
    20701 ccatttgccc gatttcttgg cgggtaattt tgatctgcat accttccggg tgagtcattg
    20761 catccggcat tttagctaag ttgagcaagg tttgagcaat gcgaccggca acgtctaaaa
    20821 aggcaagatt accgacttgg cgtgaagttt gacgtaaacg gcgagccatt tgtgccgata
    20881 aatacattaa aatatcgggg tttaaatgga ctagttgttt gaatttttta taggaaattt
    20941 ccgcaatttc acaaggacct ttagtgcgga cgtaagcggt acgttgttgg actttttctt
    21001 caaataaact taattcaccg acaaactcac ctgtgcctaa gttagttaag agcatctctt
    21061 tggtttcatc atctttgatg taaaccgaca ctgagccatt cacgatgtag aaaagtgatt
    21121 ctgcatcttc accggcgtga atgagtgtat atttcgccgg ataacgatgg atatgacaat
    21181 gggttaaaaa ccactccacc gcagggtcgt gaatagaggg cggaggagtt acattttcca
    21241 gaggagctgt tgaaagtgtc atatcttgca tagtatttcc tataactctt atactaggtt
    21301 aaatttttag aattttaaca cgaaattaaa ggttagccta aaaaagattt tttgtcttta
    21361 atatcaaggc tttcgtgtaa ttccgaccaa acaatcacca ctttatctgc cttaagttgt
    21421 gtgagtaatc gttctctttt ttctgccaga gaaagttccc tttccccgta gtctgtgcct
    21481 tctcgtaaaa tgaaggaatc taaaatatta tgtaaggttg attcttcgag ttcttgccaa
    21541 ggtataatca taattaatca aataaaggct taataaatgc ccactgtttt tcaaaatgtt
    21601 ggtgttggtt atagctgaaa ttagaacgaa ccaagcgtaa aaattgccct tcgcagaaat
    21661 tcactaaata accggctaag gctctttcgt cttcaaagct cttgcgttca cgcagtttac
    21721 taagttgcaa aatattggca aattgtaact ccaagttatc aaagaatttt gccactcgag
    21781 ctttgagcaa ctcctcttca aacatcaagg cgtgtccggt caggatgcgg gtaacgcccg
    21841 ggtttttgcg agcaaattct aaaatcacat ataaaattgc tcgcaccgaa ttggcactgc
    21901 tgtcttggcg tttattggcg tgaatatagc tggtgagggt ctgctcgatt ttctcgatta
    21961 acgcttcaaa catcttggtt ttacttggga aatagcgata caacgccccc tccgacaccc
    22021 ccaccgcagc ggctaaacgc tcggtagtga tacgctgcat tccctcttca gaatttaaca
    22081 agctgattaa cacttccaac acttgttggc ggcgttccac cactgatttt ttcggcattt
    22141 taattttagg ttctgtcatt gccaatccta ttattgctta cctgaatgcc caaaaccgcc
    22201 ttcgccacgg tcggtctgct caaactcttg cacaatgtta aaacttgcct gaaccaccgg
    22261 cacaaagact aactgagcaa tacggtcgcc cacgttcacg gtaaaatcag cttggctacg
    22321 gttccaaagc gacactttca gctcgccttg gtaatcgcta tcgatcaagc cgactaagtt
    22381 gcctagcacg atcccgtttt tatgccctaa acctgatctt ggtaagatca ccgctgccaa
    22441 attcggatcg gcgatataaa ttgaaatccc cgttgggatc aacaccgttt cacccgcttt
    22501 taccgtcagc ggctcgttga gcatcgcccg tagatccaag cctgccgagc cttcggtcgc
    22561 atacgcaggt aatggaaatt cattgccgat acggctatct aaaattttta aatcaatttg
    22621 tttcattctt tttccttttt gtaaattttt aaaactatat tattcagtta taaaaggttt
    22681 taattgtatc gttccaagtg gaagttcagt caatatttcc cagcttgtgt tgtggtaaaa
    22741 tcgaaataaa cttgcaacgt tttcaacgta gcttgaatta aatttacctt ctaatggctt
    22801 tattcctcca gtaaaatgaa ttatatgtgg aatataattt ggcgaaattt tttgctgggc
    22861 aatatcatct aataaatgtt ctgtctgata attatatttt cgatctaact caatccaatt
    22921 atattgaaag cagtaattaa gaatatcttg atccccaaat ggtaaatttt ctttaaatct
    22981 ctcagtaagc tgtataaatg gttgcttact aaaatgcttt gcatttagat aaaatacacc
    23041 agcattgaaa tagtttttgt aaatataggg atgatttttt agtttgttta cataaggatc
    23101 agcaattgca gcaatacttc caaaagaaaa atctaggttt gtaaatggat ccgtaatatt
    23161 tccattaacc acaagatcgc aatctaaata aatccaatat gggctatcgc tgtgttcaaa
    23221 tagttcttca atataatatc gtaggtaagt tgaattagta atatagccgt tggagttaaa
    23281 atttgctaaa ttatttgaat ctaaatagcc aagtcttaat gtggaatatc tattttctaa
    23341 ataggggcgt aatgtttcta tccagtggtg agaaatatcg ccagtactca atataaaaat
    23401 agataaatga ttatgatgag ctaatagtga ttttaaggca atctctaaat atggcaggta
    23461 gtttttatct gctgaaaata caatattata ctttttcatt ttgatctttg accatatttt
    23521 tctcttcttg cacaattcgt tcaccgattt tccaataggc ttcgaccatt gccgaattca
    23581 cggcttgata cgccttttgg cgagcagata aaagaatatg tttaatgtcg ttgatatact
    23641 gatttgacgt aagttgcata attttcatcc tattaccctt aagatttcac aaggtagcca
    23701 gccaatttcg ttttctcttt tgacaattgc ccattggtaa tgtagttcaa ggaattctac
    23761 tctctcgcct tgtgctgcaa caagttccgt tgggttataa tcgcatatca atttatcttc
    23821 gctaataaaa tggcttggca caaaggtttt ccaaccgtca atttcacagg caaaccagtt
    23881 tgggtagttt acacattcac tccctaatcg aacggcagta ccagctgaga atgtaggaaa
    23941 tttcccttcg ccttgatgaa aatggctaac cagtaatttc attatttttc tcgataatgt
    24001 tttacaattt cctgtaccaa actttctgcc aatttgcttt tatccgccag aggaagcgtt
    24061 ttttcaccat ttttccagaa caaatgcaac gcattttgat cctgcccgaa cacttgtccg
    24121 cctgagacat cattggcaca aatcatatcc agatttttgc gttcgagttt cgatttagcg
    24181 tactccgcca cattttgcgt ttctgcggca aaaccaacca caaaagggcg gttttcggca
    24241 agattggcga cgttagcgat aatatcgggg ttttttacca attttagcgt gagttcatca
    24301 ttggcatcgg ttttcttaat tttttggtca gagactgccg ccattcggta atcggcaacc
    24361 gctgcacagc caataaaaat cgcagatttt tgggcaaatt tgaccgcttg ttgctccatc
    24421 tcaaccgcag attccacatt aattcgttcc acatttttcg gcgttggtaa attcaccgga
    24481 ccgctaatca acgtaacctt tgctccacgt tcggcaaagg cattagcaat cgcgtagccc
    24541 attttgccgg agctgtggtt gctgatataa cgcacagggt caatcgcctc acgagtcggt
    24601 ccggcggtaa tggttacatt taagccctct aaatcttgat tgttggagaa atgagccaac
    24661 accgcttggt aaatttcttc aggctcagac attctgccag cccccacatc accacaggct
    24721 tggaagccac tattcgggcc gatgagctga acgccacgat tgactaaaac agacagattt
    24781 tcttgcaccg caatctgttt gtacatttgt tgattcattg ccggtgcaag caaaatcggg
    24841 cttgcagtcg caaggcagag agtggaaagt aaatcgttgc ccattcccat acgcaggcga
    24901 gcaataaaat cggcacttgc cggggcgata acgattaaat ccgcccattt tgccagctca
    24961 atatgcccca tcgccagttc ggcttgtggg tcgagtagtg aagtggaaac cgcattgccg
    25021 gaaatcgctt gtaaggtcaa aggcgttaca aaggcttctg ctgctggggt tagcactaca
    25081 cgcacttccg catttgcctt ttttaagtgg cggataaatt caatggtttt gtaggctgca
    25141 atcccaccgg aaatgccgac taaaattttt ttgttttgta acatctttac tatccttaaa
    25201 gcgtggattt attttgcata ttttagcgga ataaggagtt gctcacaact tcactatttt
    25261 tgcgatcttg ctcgaaaaat tgaataaatc cctttgtctg caaaggttgg ctcttttatg
    25321 cttaactaaa ttgatggagg aaaaaatgaa cgattttttt gatgaagatt ctcaagagcc
    25381 aacaatgatg ccgcgtgaga aattattaac acagggggca gcctcattaa ccgattccga
    25441 attattagcg atatttttac ggactggtac gaaagctgtg cctgtgctgg cattggcaga
    25501 gagtgtgttg atggcatttg gctcgttacg ccaattactg aatgcaaata ttgatgattt
    25561 ttgcaaaatt tacggtttag gcaaaaccaa atacattcag ttacaagcct ctaaagagat
    25621 gaccaaacgc tatctggctc aacaaatgga atttagcgag atgattcaag ccccttatat
    25681 ggcgattatg tatttccaaa ccgagttgga ggaagaagaa cgggaagttt ttatggtgct
    25741 gtttttggac aaccaaaacc gattgattta taaagaaaaa atgttcttcg gcaccattaa
    25801 tcaaactgct gttcaccccc gagaaattat taaaagagcg ttaaaatata atgccgcggc
    25861 gattattgtg gctcataatc acccctcagg ttcttgtctg ccgagtgagt cggacagaag
    25921 tttaactaaa aagatcgaaa tggcgtgcga attggttgat attcgctttg tggatcatat
    25981 tattgtcggc aaaggggact atttttcgtt cgaggaagag aaattagaga tgaaggagca
    26041 ttcatttttg caaatttctg atagaaaatg accgcttgct ttatgtaacc tttaacattt
    26101 ctcctgaaac agtaaaagat acgcatataa attctacttg aatataacaa atgaaatcgg
    26161 tataatcggc agtctttatt acatagactg tggtcgggtt aatgcctgac gaggcaatca
    26221 aaatcggagg ggttggttga gcaacgcctt ttgtgagatc gcccgaacca tttttaagct
    26281 taaaattatt ggagaaattc aaatgtcaag agtttgccaa gtaaccggca agcgtccagc
    26341 agttggtaac aaccgctcac acgcaatgaa tgcgactaaa cgtcgtttct taccaaacct
    26401 tcacactcac cgtttctggg ttgagagcga aaaccgtttc gtaaccttac gtttaactgc
    26461 gaaaggtatg cgtattattg ataaaaaagg cattgatgca gtattagctg aaatccgtgc
    26521 tcgtggcgaa aaaatctaag gagctaaaaa atggcagcta aaggcgctcg tgagaaaatc
    26581 cgtttagttt ctacagcaga aactggtcac ttctacacaa cagataaaaa caaacgtaat
    26641 atgcctgaaa aaatggaaat caaaaaattt gatccagttg tgcgtaaaca cgttatctac
    26701 aaagaagcaa aaattaaata attttgtttt aagatttaaa acccagcgaa tgctgggttt
    26761 ttcatataca aaaaattagt gaaaaaagac cgcttgtatg attaaactaa tgatagctta
    26821 aaatcattac ttgacaaggc ttggctatat tcaataggta gtcctttatc tgtgataatt
    26881 tgtgtaaagt tatcgagttg agttgcacga aataaagagt attttccata tttgctgcta
    26941 tcggcaacca gtactttttg tttggcgttt tgttggagca ttctttttaa attagctttc
    27001 tcttctgtag gtgctgtaac tcctttttct aagctccaag aattacagct cacaaaagca
    27061 atatcaggat taatattttc taataaagtt aaactatgat taccaataca agattgacta
    27121 ctattatcta ctcgtccccc tgtaataatt aattctattt gcttatattc agagagtaat
    27181 aaagcaatat gtagatcagt tgtaatcact cgaagtggca tatgagcgat ttttttcgca
    27241 atgcatagcg ttgtagtgcc agcatctaat aaaatagaat ttcccggtga aataagcgaa
    27301 acggcatatt cagctatgcg ttctttttcg acaatttgct taaattgctt ctcatttgtt
    27361 gttggttgaa acggtataaa ttggtttaag ctgacccctc cgtgtgtgcg aatcacgacg
    27421 ccttcttcat ctaattttat taaatcacgg cggatagttg caggagaagc ctcagtcact
    27481 tttaccagtt gctctacggt agcaatattg tggtttttta ggaatagtaa aatttgttct
    27541 agacggtttt tagacatata aactctctaa tttttaactg cttttactat aagtaatttt
    27601 ttaaaaataa gatagttaaa attaaagaac ctaaaacatt gttgctttag gttctttgtt
    27661 gttactagtt cattatattg cttaagagtg tgttgtttcc aaatcctcca gatttagtca
    27721 ttacagtgat gcctgagtag ttgccctttt caatggagca taaaggaacg cccggtacta
    27781 ccgcatattg tacattcatc tctgttacat tcatttgatc taataatgct gctgcaccat
    27841 ctccaccaaa taatataagg ctatcaaatt tttcattatc aaggcagaat ttacttaaat
    27901 cagctaaatg ttgagaaatt tctttagaag tttccgtgat attggcagat tttgcattta
    27961 caacttttgc agggtttgcc cgaataataa catgatctct actaaaacgt attagagcgt
    28021 ttaattgtag tttcagtgaa tgttctgatt gcgagtagtt aatcaactgt gaaggcgaag
    28081 gattaaatac aatagatttt cctcctaaag ttgaaatata ttcatcaact tgcagttggc
    28141 ttgtttcgtg aattgaggtt acgacaatta atgctctacc taatttaaga tttcgctctg
    28201 gttgttgttg attttggata tttttcaact tctgtgccaa tccggctgag ccaacaggaa
    28261 taattttatt acctatgtga tttatgactt gggcaatcat tgagagatct tcgtgcgttt
    28321 tagcatcaat aacgatctgt ttatattcac tattttcaat agatgcctgc aaattatcga
    28381 ccgtatcaca cgggattact tgagcatcag gcaatagttt ttgcatagaa gatgaatgca
    28441 cagggcagat aggatctttt cctgaagcag tttcatttac aggaacacca ttaacatata
    28501 aatgaccagc ttctatagtt cttcccattt ctggatatgc aggacaaata attgctttaa
    28561 catcgggata taaaccagcc caagctttaa tagcaccttc aatctgatat ttaacagagc
    28621 ctctcattgt ggaatcaatt ttaaggtaaa tttgcccgat actattttga atagcattgc
    28681 taattgcaat ttgagtcagc tcttttgctt tctctccaat tgctcttgaa tctgtagaaa
    28741 cagaaattac ttgggcttta tcaggatgaa tttgggctaa tgccgaaact ttagttttta
    28801 agacagtgtc aaatcctgat tcagcaaaca taaccgcggt atcatttgca ccagtaaggt
    28861 catcagcaat aactaagagt gtctctttca tagattttct ccttttatag tgtcttgttc
    28921 taagccacct tgacgtttta aaacccacgc tgcaaataat ggagctaaga ttgctgaaac
    28981 taatacagct gcggcaatct gtgcagtcgc agtttgaaca aaaggtgcta atgtagggtc
    29041 tgcttgagca acaatttcag gtgtaataat ggcatttcca gcagtagttc ctgctgcaaa
    29101 cccgattcct gattgattac cacgtcttaa aattgttttg taaccgataa atacaagaaa
    29161 acctgtaaag agagaagcta cgatacctaa aataattcct gttgctcctc cagtaataat
    29221 agattgcaga ttgattcctg ttcctaatgc aaaagcaaag aaaggaatga ctattgcacc
    29281 tgttggtttc attaactctg tccatttagg atctaagtta ccaataacca taccaataat
    29341 aagaggaata acagctgcaa gcattaatga aagaggaata tctgctaatc ctgatacacc
    29401 taaaaatagt aaaacaaaga aaggtccatc attaacagcc gaagcgacat aagctccttt
    29461 atctctataa tcaccatatt tccctgtaaa cgctaaccaa ataccaccat ttgaatttgc
    29521 aacaacagtt agcatagcta ataaagaaac gcccataaca ccatcattac ctacccataa
    29581 tcctaaaatc acaactaaaa gagcgggaat aatagtttta aatagtaata caacaccggt
    29641 atgggcaagt acaggtccag aacttctcac ggtaatttgc atacctgtag cgaaaattaa
    29701 tagtgcaata agtggtcctg ctgatgattt gaataaagcc gtcgtaaatg aacctaaatt
    29761 taaaaattca ggaaagaatg taccaataat agaaccaaga attagcggta ttaccattgc
    29821 accgccagga attttattca taccatcata tatcgggacg atggatttag atgtttgagt
    29881 agacatatta atctccttag tgtgtcgcat atttgatatt tgccattttt gcacccaaat
    29941 agagtgcttc agtcatacta cgactatctg ctgttccttt gcctgctatt gggaaagcag
    30001 ttccgtgatc gacagatgtt cgaataaatg gaagaccgac agtaacgttt acacctgtat
    30061 caaagcctaa taatttgata gggatatgcc cttgatcgtg atacatcaca acaacaatat
    30121 cgaattcatt taggttagct gcacggtgaa ataaagtatc cggagggaca ggccctgtaa
    30181 cattaaaccc tttggcttga gcctcttgaa ttgcgggaac aatttctttt tgatcttcat
    30241 cgccaaacat tccattttca cctgaatgag gatttaaacc agcgactgca atacgaggtt
    30301 ctttaaaccc aagaatgcga gcattttctt ctgctaaatc aataactgta gcaactcgtt
    30361 ctttggtaat taaatcacag gctttacgaa gttggacgtg agtagtaacg tgaataacat
    30421 tgagtttttc actggttagc atcattgagt aatctttagt attactgagg gttgcaagga
    30481 tctctgtatg gccaggaaat ggtttaccac ctgcgtgtag ggcttcttta ttcagtggtg
    30541 ctgtaacaat agcgtggatt tttcctccca ttgctaaatt aactgcctct tcaatatatt
    30601 cataagctgc ttttccagca cgcggatcaa cttgagcaaa aggcaaatct tcaggcaggt
    30661 tattcaaatc taaaatatca ataacgccat attcggctac aaagttatct agattattga
    30721 gaattcttaa tttcaattct gaatgaacaa taggtaaggc tcgttgtata atttttcgat
    30781 caccgatcac aacagggtgt gctaactcat aaatccgttg attagctaat gctttaataa
    30841 taacttctgg tccgataccg gcggcatctc ccatcgtaat tcccaatata ggtttcatat
    30901 ttactccttg attgaaatta atcattttga acgaagtata gcttatatga aatcataaaa
    30961 gtgtgataaa catcacaaaa gtgaactttt ttaatcttat tgatttaatt taatcaattt
    31021 taaggtggta aattggatag ggtatgaaag tgaaaggcat ttattgctag ataaaagctt
    31081 cccttttcaa taaaaaagag tatcatacgc tctcttaaac gtaaccctac atttaagtct
    31141 gtttccaacc tatcccaatt tctttattcc ttaggggcat atagggtaaa aacaaaaaag
    31201 ctgaaacgct ttttttaata agtagcgagt caaatgcccc atggcatcta ttcttttagg
    31261 aatagaaagc ttaggctttc cgcaaggcac ccgacttatt tttttcacct cttgtagaag
    31321 gtttattttc aatgacaatt aaaactccta ttcaagccgt tcttgcttca aaccaatatt
    31381 ttttagatcg ccaagatgca atggaatcaa acgtgcgtag ctacccacgt aaattacctt
    31441 ttgcttacca aaaagcacaa ggcgtttggg taactgatgt tgaaggcaat gaatacctcg
    31501 atttcctagc aggtgcagga acgcttgcat taggtcataa ccaccctaaa ttaatccaag
    31561 cagttaaaga tgtattagac agtggtttac ctttacactc gttagatatt acgactccgt
    31621 taaaagatgc ttttacggaa gaattactct ctttctttcc aaaagataaa tatatcctcc
    31681 aatttactgg cccgtctggt gcagatgcta acgaagcggc aattaaatta gccaaaacct
    31741 acactggtcg tggcaacgta attgctttct ccggtggttt ccacggaatg acccatggtg
    31801 cgttatcgct caccggtaat ttaagtgcga aaaatgcagt acaaggctta atgccgggcg
    31861 tacagtttat gccttatccg cacgaatacc gctgtccgtt tggcattggt ggcgaagccg
    31921 gtgcaaaagc agttgaacat tattttgaga actttattga agatgttgaa agtggtgtgg
    31981 taaaaccggc agcggtgatc cttgaagcca ttcaaggtga aggcggtgtg gttccggctc
    32041 caatcagctt cttacaaaaa gtgcgtgaag tcactcaaaa acacggcatc ttaatgattg
    32101 tggacgaagt tcaagctggt ttctgccgtt cagggaaaat gtttgccttt gaacacgcag
    32161 gcattgagcc ggatatcgta gtaatgtcaa aagcgattgg tggtagctta ccgcttgcgg
    32221 tattagcgat caaaaaagag tttgacgctt ggcaaccggc aggtcatacc ggtacattcc
    32281 gtggtaacca attagcaatg gcaaccggct atgtatcgct taaaattatg cgtgaagaga
    32341 atttagcgaa aaacgcacaa gagcgtggcg aatacttaac taacgcatta cgtgaattaa
    32401 gcaaagaatt accttgtatt ggcaatgtgc gtggtaaagg cttaatgatg ggaattgata
    32461 ttgttgatga acgtcagcca aaagatgcaa caggtgcata cccgcgtgat tgcgatttag
    32521 ccgttgcaat tcaaaaatac tgctttaaaa acaaattgtt attagagcgt ggcggacgtg
    32581 gcggtaatgt ggtgcgtgtt ctttgtgccg tgaatattac ccaagcagaa tgtgaagagt
    32641 ttattaaacg ctttaaacaa tctgttgctg aagcagtgaa agcggtgcgt ggttaatagt
    32701 tagaatggta ggagcgaaac atttttcgcc ctaatgtaaa aaggggcgaa tatttattcg
    32761 cccctacacc aataggatag aaataatgtc aaacctagaa aaacacagac aatccctgtt
    32821 ttgtagcgat ccaaaatcga ttgcggatta tgaatcggca atgaataacg ctgtgaaagc
    32881 ggtttcagac tggctgaaag aagaaaaaat gtacaccggt ggctcaatta aagagttgcg
    32941 tgccaaaatc aacggtttta acccaaccca agctggtgtg ggcgtgcaaa aatcactgga
    33001 gcatttggtg gaaattttct taaagccaag cctcaaagtt caccaccctc attctttggc
    33061 ccacttacat tgcccgacaa tggtaaccag ccaaattgca gaagtgttaa ttaatgccac
    33121 caaccaatca atggactctt gggatcaaag cccggcaggt tcgattatgg aagagcattt
    33181 aattgactgg ctacgtcaaa aagtcggcta tggcaaagga acttcaggag tctttacctc
    33241 aggtggtacg caatcaaacc tgatgggcgt attattggct cgtgactggg cgatagcgaa
    33301 ccattggaaa aaggcagacg gttcagagtg gtcggtgcaa gccgacggta ttcctgccga
    33361 tgcaatgcaa aaagtgaaag tggtttgttc cgaaaacgct cacttctcgg tgcagaaaaa
    33421 tatggcaatg atgggaatgg gtttccaatc ggtagtgact gtaccgtcaa atgccaatgc
    33481 acaaatggac gttgaagctc ttgcgaaaac gttggcggat ttaaaagccg aaggcaaaat
    33541 tgtggcttgt atcgtcgcaa ccgcagggac gaccgatgcc ggtgcgattg atgatttaaa
    33601 agcgatccgt aaattagccg atgaacatca ggcttgggtt cacgttgatg ctgcttgggg
    33661 tggtgcatta ttactgtcga aagatttccg ccacttctta gacggcattg aattaaccga
    33721 ttccattacc cttgatttcc acaagcattt cttccaatca atttcgtgtg gggcattctt
    33781 gctaaaagat gaagcgaatt accgctttat tgattacaag gcagactacc tgaattcaga
    33841 atatgacgaa gaacacggcg tgccgaattt agtgtcaaaa tcattgcaaa ctacccgccg
    33901 ttttgatgcg ttaaaattat ggtttaccgt tgaagccttg ggtgaggagc tatacgcttc
    33961 aatgatcgac cacggggttt atctttctaa agaagtggaa gcctacatta atgccaccga
    34021 tggcttggaa atgttagtgc cggcacaatt tgcctcagtc ttattccgtg tcgtaccaca
    34081 aggttacccg gcagaatttg tggatacctt aaaccaaaat gtggcagatg agttatttgc
    34141 tcgtggcgaa gctaacattg gtgtgaccaa agtcggtgag catcaatcac tgaaaatgac
    34201 tactttaagc ccgattgcaa cgcttgaaaa cgtaagagca ttattagctc aggtgttggc
    34261 agaagcagat cggattaaag attcgattgt aaatggaact tatgttccgc caattgatta
    34321 aactgcgtta aaaataaaaa ggtgttttcg acatttattt gtgttttaat gtttgcattc
    34381 ggtagtcttt atcgaatgca aattttttta acaaggagtt tttatgaaaa aagtcctggg
    34441 tttaacattg atggcaatgg cgttatcggc gtgtaattca actgcttcca acggttcttc
    34501 acaagcaaat acaggtgttg caccggcgaa tgtgattagc gtgaaacagg cgttagcggc
    34561 agcagatgac agctacgtga cggtagaagg cacactctta aacaaagtcg gtgacgaaac
    34621 ttacttattt aaagatgcga cagggcaaat ccgtgttgag attgacgatg aagtatgggc
    34681 aggtcagcac gttggtagcg aaggcaataa agtccgttta tacggagaga ttgacaaagg
    34741 tttcaataaa accgagttag atgttaaaac actcactgtt ctgtagaaga tcaaacctta
    34801 atttggttcc ccgccttgtt tggcggggtt tttacgttaa ttaatcaaac catccttttg
    34861 caaaaaaacg caaaattata ccgcttgttc cttcaatatt gtgctacaag atgctgtgat
    34921 ttgctgcaaa atagcggtgt aatcagtctc ttttaaacca atattaccga aatagtgcat
    34981 ttttacatca cgaatcccac agaactcaaa cagccctttt cccagcgtat gttcaaatgc
    35041 tgctaaaaag ccttttcgtt catatttttc attggaatta ccgagcgtta caaattgttg
    35101 catttttttg ccggtcagca agccgatact ttcaatttcc ccgttacgat aggcaaaatc
    35161 ataacttaac accctgtcta aatagccttt taaaattgcc ggaaagccca tccaccaaag
    35221 cgggtaaatt aacgtaatca catcagcttc aagccaatat tgatgctcaa ttgccacatc
    35281 tgcttcatag tgtttactga gtgtgccttg aaattccgcc cagtctaata tcggcttgaa
    35341 gttgagttgg tagagatctc gtacaaccac cttatttgga acggaagctg ctatcgtttt
    35401 ttccaaaatc gcatggttaa agctggaggg attcgggtgt gcgtaaataa tcaggtgatt
    35461 catagcgttt tcctttactg tgtcgaggca gctactagaa gattttagcg aaactttctt
    35521 tgatgaaaat caatattttg gcgaatatac cggcaaatac cccgtttgag gaatgaacgg
    35581 ttttaagtga acattagata atttagccta ttatagtgat gagtaaaaag gtgttttctt
    35641 gactgattat cctaatcaat cacttcctcg ccgtagcttt ttgcgagggc aatttttaga
    35701 ctcgttaaaa agccaaaaag tcagtcagca agggtatgag ccgattcgtc cgccttgggc
    35761 taatttagca aattttttag aaaaatgcac cgcttgcggt aactgcattc aggcttgcga
    35821 aacccagatt attgtaaaag gtgctgcggg ctaccctgaa attgatttta gccgtggtga
    35881 atgcactttt tgtgaaaaat gtgtgcattc ttgcgaggca gaggtattcc gagcagtttc
    35941 agaacagcct tggagccata aaattgagat tcaagccggc tgtttattaa agctcggaac
    36001 ggaatgccga agctgtggcg atagctgtga gatgagagtg attcgtttcc gcccgagttt
    36061 aggtggcatt gccgaaatgg tattaaattt ggaaagctgt aatggctgtg gggcttgttt
    36121 gagcgtttgt ccgacaagtg cgataaaaat tcagccatta caaacacagg caaacagaga
    36181 tgagtgaaaa attatccgaa caggaaaact ggtatgtgtg cagtctcgtg gtgcaagcaa
    36241 aaccggaaaa attggaagaa gtaaaagccg agattctgaa gattcctcat accgaaattc
    36301 acggtgagaa aacagatgaa ggcaaattgg tcgtgacgat tgaaagcaat gtgcatttag
    36361 ccctttccga tcgaatcgat caagtaagag atattaaagg cgtgattgtg gtgtctttaa
    36421 tttctaatta cattgatgaa cagtgattaa tgattatttt tgaagccaaa cgtgggacat
    36481 agttatggaa ctcaatcgta gagattttat gaaagcgaac gccgctgtgg cagctgctgc
    36541 agccgcagga attatgattc ctgtgaaaaa cgttcaggca gatgacaccg gtattcgttg
    36601 ggataaagcc ccttgtcgtt actgtggtac aggttgtagc gtgctagtcg gtactaaaga
    36661 cggtaaagta gtggcaaccc aaggtgaccc ggatgcagaa gtaaaccgtg gtttaaactg
    36721 tattaaaggt tatttcttat ccaaaatgat gtacggtgca gaccgtatgc aagagccaat
    36781 gttgcgtatg aaagacggta agttcgacaa gaacggcgat ttcacgccgg tttcttggga
    36841 tcaagccttt agcattatgg cggagaagat taaaaccact attaaaaatg acggcccgaa
    36901 tgctgtaggt atgttctcat caggtcaaac aaccattttt gaaggttatg cgaaagtgaa
    36961 actttggaaa ggtggtttcc gttcaaatac gattgacccg aatgcccgcc actgtatggc
    37021 gtccgctgcg gttgccttta tgcgtacctt tggtatggac gagccgatgg gctgctataa
    37081 cgacatcgaa aaaaccgatg cgttcgtgct ttggggttca aatatggcag aaatgcaccc
    37141 gattttatgg tctcgtattt ctgatcgccg tttatcagac aataaagtga aagtggtggt
    37201 aatgtccact tacgaacacc gttcgtttga attagccgat acaccgatta tcttcaaacc
    37261 acactcagat ttagcaattt taaactacat tgcgaactac attatccaaa acgataaagt
    37321 aaattgggat tttgttaaca aacacaccaa atttaaacgg ggtgaaacca atatcggtta
    37381 cggtttacgt cctgaacaca aattacaaca aaataccaat gcgaaaactg ccggtaaaat
    37441 gtatgacagc gattttgaag agtttaagaa aatcgttgcc ccttatacat tagaagaagc
    37501 tcaccgtatt tcaggcgtgc cgaaagatca gcttgaaaca ttagcgaaat tatatgcaga
    37561 tcctaaccaa aaattagtgt cgttctggac gatgggcttt aaccaacata cccgtggtgt
    37621 gtgggtaaac catatgatgt acaacgtcca tttattaacc ggtaagatcg cattagaagg
    37681 ttgtgggccg ttctcactca cgggtcagcc gtccgcttgt ggtactgccc gtgaagtggg
    37741 tacatttatt caccgcttac cggcagatat ggtggtcaca aatccgaaac accgtgagat
    37801 tgtagagaat tcttggaaat taccggctgg agcaattcct gatgtaccgg gctttcacgc
    37861 tacagctcaa agccgtgcct taaaagacgg caaaatgaaa ttcttatggc agatgtgtac
    37921 caacaatatg cagggcggcc cgaatatcaa tgaagagatc ttcccgggct ggcgtaatcc
    37981 tgaaaccttt attgtggttt cagatccgta cccatctgtt tcagcagtgg ctgctgactt
    38041 aattcttcca acctgtatgt gggtggaaaa agaaggggct tacggtaacg cagaacgccg
    38101 tacccaattc tggcgtcagc aagttaaagg gccggcaaat gcccgttcag atacttggca
    38161 gttagtagag ttctctaaat acttcaaagt agaagaagta tggccggaag agttattagc
    38221 taaagcaccg gaattgcgtg gtaaaactct atacgaaatc ctttaccgca acggcaaagt
    38281 agatagctac caagtgccaa ctaacattcc gggctatatg aatgacgaag cagatcactt
    38341 cggttactac attcaaaaag gcttatttga agagtatgcg gaatttggcc gtggtcacgg
    38401 tcacgattta gccgactttg acacctacca caaagtacgt ggcttacgtt ggccggtggt
    38461 aaaagacgag aaaaccggcg aatacaaaga aactttatgg cgttaccgtg aaggctatga
    38521 cccatacgtt aaagccggtg aagaagtggc attctatggc aatgcggaca aaaaagcagt
    38581 gattttaggt gtgccatacg aaccacctgc ggaagcaccg gacgaagaat atgacttatg
    38641 gttctgtacc ggtcgtgtac tagaacattg gcacaccggt acgatgaccc gccgtgtgcc
    38701 ggagttacat aaagcattcc caaccaactt ggtttggatg cacccgaatg atgcgaaaaa
    38761 acgaggctta cgtcacggtg ataaagtgaa agtgatttca cgccgtggtg aatatgtatc
    38821 gaacttagat acccgtggac gtaataaatg tccggaaggt ttgatttact cgactttctt
    38881 cgatgccggt cagttaatca acaaagtgac acttgatgcg actgatccaa tttcatttga
    38941 aaccgacttc aaaaaatgtg cggttaaagt ggtgaaagct taattgtagg ggcaaattat
    39001 ttgcctcaga caagcggtca aatttgcaaa tttttttaca aaaacgaccg cttacctaag
    39061 aggaacccac aatgaaaatg gatccaaatc gtcgccagtt tttaaaaaat gcaacccgta
    39121 ccgcagccgg tgtttgcggt gtaggaatga ttttagggct acagcaacaa caaagttttg
    39181 cccgtcaagg ggtagcacta cgcccaccgg gtgcattgcc ggagcaagat ttcctgagtg
    39241 cttgcacccg ttgcggacaa tgtgtgcagg cttgtcctta cgatatgttg catttggcat
    39301 cgcttatttc accagtggaa gccggcacgc catactttat tgcacgggat aaaccttgcg
    39361 aaatgtgctt ggatattccc tgtatgaatg cttgcccaac cggggcatta agcgaagagc
    39421 taaaagacat tgacgatgca cgaatggggc ttgcggtgtt gctcgaccac gaaacttgtc
    39481 ttaactggca aggcttgcgt tgtgacgtgt gttaccgtgt ttgtccgtta atcgacaaag
    39541 cgattactct tgagaaagtg cataacgacc gtacctcgat tcacgccaaa ctgattccga
    39601 ccgtgcattc tgatgcttgc accggttgcg gtaaatgtga acaggcttgc gtattggaag
    39661 aggcagcgat caaagtgtta ccgatggatt tagccaaagg cttgctcggt cgtcactatc
    39721 gtttaggctg gcaagagaaa caaaatgccg gtaaatcgct gattgaagat gttcacccag
    39781 agggtttacg cccagcttat gatgccagaa tgccggaagg cttacacgag ccggtgtatc
    39841 agcatatgga agtaaaacct gatgtgaaag tggctacgcc aagtcgggcg acacaaaact
    39901 atgtgccgaa ctctacgacg gtggaagctc cggagcattt ccctgattta gacttgaatc
    39961 tcaagggggt gaaataatgg cagccaattc tccaaaaaat gcgggcttag aggctcgtca
    40021 gaaactaggt tggtggcacg cttaccgctt tttgatttta agacgcttaa gccaactcag
    40081 cattattttg atgtttttaa gcggcccact ttggaatgtc tggattttaa aaggaaacta
    40141 cagcggtagc ttattactag ataccgtgcc gatgacagac ccattaatga ccgctgaagt
    40201 gctggcaacc ggctatcgcc ctgaatggac ggtattggtt ggggcgttaa ttatggtggc
    40261 gttttacggc attgtcggca gcaagctgtt ttgtagttgg gtctgcccga tgaatatggt
    40321 aacagatact gctgcttggt taagacgcaa actcggtatt cgccaaactg ctaaaattcc
    40381 acgcaattta cgctatgtga ttttggcggt gattttagtc ggtagtgcga tttccggaac
    40441 actattgtgg gagtggatca acccggttgc ggctctcggt cgggtgtttg tattcggttt
    40501 aggggcaacg ctttggctgg ttttagtggt gttcttgttt gacttattgg tggcagaaca
    40561 tggctggtgt ggtcatcttt gcccgattgg tgcaacgtat gccttaattg gggcgaaaag
    40621 cctgattaaa gtcaaagtgg tagatcgtaa ccgttgcgat aattgtatgg attgttacaa
    40681 cgtttgtccg gaacctcaag tgttgcgtgt gccgctacac ggtaaaccgg aggaaagcac
    40741 ggttatctta tctaaagatt gcattacctg cggacgttgt attgacgttt gtgccgaaaa
    40801 tgtatttgcc ttcggaatgc gttttcaagg cagtattgat gtgaaaaata tttaattttt
    40861 atctttttga aaacaagaat tttaatggag tgaacctcaa atgagaaaat atctcgcctt
    40921 cattttagcc gtgatgtccg gctttgcaat ggcggaagcc cctaagttat ccggatcaat
    40981 tgatgagaca accgaaagtg ttgcaccggg atttcataac ccacaaaaag atgtgggcac
    41041 gattccaacc actttccctt tccaaccacc gcttgttcca catagtattc gtggcttaca
    41101 agtgagcaaa aacgtaaacc attgtttagg ttgccacgct attgaaccat ctaaaaccac
    41161 aggtgcgacc cgtttaccgc caagccattt taccgaccgt gatggcaagg tgtacgaaaa
    41221 cgaatctcct cgtcgttatt tctgtttgca atgccacgtg caacaaactg atgtaaaccc
    41281 gattattcaa aataaatttg aatctgtacg tgaatctcaa gctaaataag gagtaagtaa
    41341 tgttgagaag attttgtaac tggttacgta gcccaagcaa aatggcaatt ggtgctgtaa
    41401 tccttatttc tgcattaggt ggtattttcg cttggagtgg ttttaatgca gggttagcaa
    41461 tgacaaatac tgaagagttt tgttcagatt gccatatgaa cgatgttgtg ccggaatacc
    41521 gtgcctctgc tcactattca aaccgcagcg gtgtgaaagc gatttgttca gattgccacg
    41581 taccgcacga attctttcca aaatggcaac gtaaaatcat agccgcaaaa gaagtttatg
    41641 cacactttac cggtaaagta gataccaaag agaaatttga agctcatcgt ggcgaaatgg
    41701 cagaacgtga atgggcacgt atgaaagcga acagctctca agagtgccgt aactgtcata
    41761 attttgatga tatggacttc actcaacaaa aaaacattgc gcagcaaatg cacgcattgg
    41821 cacaagagca aggtaaaacc tgtattgact gccacaaagg gattgcacac aatctcccac
    41881 atatggaagc gatccagaaa aactttatcc ctgatgattt gctgaaaaaa gcagaagaga
    41941 agaaataact taacgtgttt caatagaaaa ccctcaattt ccattgaggg tttcttttta
    42001 gtagccaagt tagtaaccaa tggcattgac atttggtaaa aaatcgttgg aatttaaccg
    42061 cttgacgacc gtttctatcg tgccgttttc gtgcaattca atttcacgcc agccttgtgg
    42121 ttgtaagtct aaggtaaact ggtcgcaatt cggcttaaat tgaatgcaag tagatggggt
    42181 ggcataaatc ggaataccat gccaaatatc atcaacctgc tgatgaatat gaccatgcac
    42241 aatcgctttt acattcttaa attttgcgaa aatctcggat aattcattgc tgttttttaa
    42301 gctatgctga tccagccacg ctgagtttgt cggcaaaata ttgtggtgca gagcaaccaa
    42361 ggtaaaccgt tgcggatatt gtgccaattt ttcttctaac catttaagct gtgagtaaga
    42421 gagttcgcca taaggcatac ctaccacctg ggtatttagc atcagaagct gccattgctc
    42481 accgagtaaa atttgtttat ggggaaggat atgtttatat tgcgccaaaa tttctgacat
    42541 actcggctga acatcgtgat tcccctctag ccacactatc ggcgagttta gcgaattagt
    42601 tatctgtgca aaatagtgat aaccagcaat attgttatct tgaatcaaat cacctgtggc
    42661 aagaactaga tcaaaatatt gcttcgcttg tttgtttatt tgctcaataa ctgccgaaaa
    42721 actttttact gttttgacat taagtagagt ttcctccgga ttggagaaaa ggtgagggtc
    42781 agttatttgt aataacttaa ttacccctgt tacgggtaac ttaatatatt cgtgcattcg
    42841 ttttgcatcc attcaaattc tagtaatttt taactggtga gattctatca gtaagctaaa
    42901 agtaaaaatg tggactatgc cgcatttttg aaaaaaagtg agattaatca aaaaaaattt
    42961 attattttcg atagctaaga caatggtaag tttgattaat actttcatat
//
LOCUS       DANLZQ010000009        42107 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.009, whole genome shotgun sequence.
ACCESSION   DANLZQ010000009 DANLZQ010000000
VERSION     DANLZQ010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 42107)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 42107)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..42107
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.009"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            283..579
                     /locus_tag="PXE50_000432"
     CDS             283..579
                     /locus_tag="PXE50_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system
                     prevent-host-death family antitoxin"
                     /protein_id="HDL5621369.1"
                     /translation="MTAITIPQFEEVTSKQFQSEFGRIVDIVKGKTPVAITQYGRPTM
                     VLFPYDQAVEARRLLAKQRLLEMLAERDKNPPAALAEITLEELDKMIDEERNAL"
     gene            569..985
                     /locus_tag="PXE50_000433"
     CDS             569..985
                     /locus_tag="PXE50_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative toxin-antitoxin system toxin component,
                     PIN family"
                     /protein_id="HDL5621370.1"
                     /translation="MHSDYLVIDTNILISGLLFPKSNPNLAVKKALLGYTICVSQATF
                     DEFLEVSARPKFAKYFSIQEREEFIANLLDAVKFVEIKETITDCQDPKDNKFLEVAIS
                     AKAKYLVTGDKKDLLSMNPYRNVEIISVSEFLAETR"
     gene            985..2643
                     /locus_tag="PXE50_000434"
     CDS             985..2643
                     /locus_tag="PXE50_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhnD/SsuA/transferrin family substrate-binding
                     protein"
                     /protein_id="HDL5621371.1"
                     /translation="MKRFLTLFLLLFSSFSLAETHQIGILAQRGEAYTRTHWQPWVDW
                     LNSQFPNERFELVPLGINEASRRAELDFLLTNQAQFFYLSNQNVRWLATLNSPFSANG
                     EQGAVGSSIWVRADSHYQQLSDLKNQTISAVDNDAFGGFLLGLYQFHQAGMRQNRDFS
                     VQFSGFPVENALALLAEKQVEAAIVPVCLLEELEKEGKFKRSDFRLILQNPQAQGCLA
                     STPLLPNWSLAAMENVPNELAVQLATRLLNSHNPDLPRWTLPFSSAQADHILRELYRH
                     PQQKSLWATVLDWVRLNKFGLLAVVLFILLNLVALRYQVYRKSKALQQAHCKMQQYQQ
                     ELTRADRLALLGEMTTGFAHELKQPLSAVRMYAEGLKSQNSDPYQQRILDKLIAQVDR
                     AVKTMQSIRDWAQNRPSGEPQAVILNQLITNVIEFVAVENRQNAQISLIADRTFRLNL
                     HATVLEQVLTNCLLNALQAGASEISVRLQAVENGLEIAIEDNGGGFSPAQLEFPFVPF
                     RTDKPHGLGLGLVLCQRLMQSLNGRIVLANGENGAKVVLLLPQI"
     gene            2729..3376
                     /locus_tag="PXE50_000435"
     CDS             2729..3376
                     /locus_tag="PXE50_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDL5621372.1"
                     /translation="MIIHILDDEESILDAMSFLLAPLGVEIQTWQSSLDFLAQADLHR
                     QGVLLLDIRMPLPDGQQVHQQLREAQSTLAVVIMTAHGDVPMAVAELKKGAVDFLQKP
                     ASFEQLKQAIAQAEKVSEKAVKIREISQNYAKLTEKERNLVPLIMQGFTNKQIADKLA
                     ISVRTVEVHRANVMEKMQAESLAGLVQMIGELQYKGSGNCSATFSFDFCRINLLL"
     gene            complement(3360..4298)
                     /gene="ttcA"
                     /locus_tag="PXE50_000436"
     CDS             complement(3360..4298)
                     /gene="ttcA"
                     /locus_tag="PXE50_000436"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005634611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HDL5621373.1"
                     /translation="MTDDIQKSDKKITYNFNKLQKRLRRNVGNAIADFGMIEEGDRVM
                     VCLSGGKDSYTLLDILLNLQQSAPVNFSVVAVNLDQKQPGFPEEVLPRYLESIGVEYK
                     IVEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDMLATLF
                     LNMFYGGKMKSMPPKLISDDGKQIVIRPLAYCKEKDIIKYAEAKQFPIIPCNLCGSQP
                     NLQRQVVKEMLNTWDRQYPGRLETMFSALQDIVPSHLCDPKLFDFKGIKHGQTIEGIE
                     GDTAFDDVKIEAKTFLYEDDDNNFAEAGMIQFKEVN"
     gene            complement(4361..5074)
                     /gene="ubiG"
                     /locus_tag="PXE50_000437"
     CDS             complement(4361..5074)
                     /gene="ubiG"
                     /locus_tag="PXE50_000437"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HDL5621374.1"
                     /translation="MQNVDQQEITKFENMAKTWWDPNGSFKPIHLLNPLRLAYILEKS
                     NGLFGKKVLDVGCGGGILSEAMAKQGAIVTGIDMTSQPLEVAKQHAKESGLEIDYQQT
                     TIENFLAKMTACNQEKFDVITCMEMLEHVPDPLSIIQSCKALLKPDGVLFFSTINRTF
                     KAYMLVIIGAEYVLKMLPKGTHEFEKFIKPAELLAWCDQADLRCQEMRGYHFNPLTEK
                     FWLNNDVSCNYIATLKPNN"
     gene            5139..5519
                     /locus_tag="PXE50_000438"
     CDS             5139..5519
                     /locus_tag="PXE50_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine dimer DNA glycosylase/endonuclease V"
                     /protein_id="HDL5621375.1"
                     /translation="MTRINLVPPTELCDQHLLAEHRELTRIPNAVAKGKFSLKGQPED
                     YKLGEGHVRFFFNKLTFLKKRYDALHEECLARGFKVQYFWAEHLPQDPSLWLDYQPTE
                     TALTVNRERIALRMPANPRFSERK"
     gene            5616..8312
                     /gene="gyrA"
                     /locus_tag="PXE50_000439"
     CDS             5616..8312
                     /gene="gyrA"
                     /locus_tag="PXE50_000439"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit A"
                     /protein_id="HDL5621376.1"
                     /translation="MSELAKDIIPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPV
                     HRRVLFSMDQNSNTYNKPHVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYML
                     VDGQGNFGSIDGDAPAAMRYTEVRMQKITQELLTDLDKETVDFSPNYDGKEMIPDVLP
                     TKIPALLVNGSSGIAVGMATNIPPHNLGEVLDGCLAYIENEQISVEELMRYIPGPDFP
                     TGAIINGRKGIEEAYRTGRGKVYVRAKASVETTDKGREQIVVTELPYQVNKAKLIEKI
                     AELVKEKKIEGISKIDDYSDKKGISIVIEVKRDAVGEVVLNHLYSLTQMQVTFGINMV
                     ALDNGQPKVLNLRQIIEAFVKHRREVVTRRTIFELRKARERAHILEGLAIALANIDPV
                     IELIRASKTAEEAREGLLARPWALGNVAPMLEAAGVGASRPEDLPEHLGVRDGEYYLS
                     EAQARAILELRLHRLTGLEHEKIVEEYKELLTEIGELIHILTSPERLMEVIREELERV
                     KTDFNDERRTEITAASGDINIEDLIAQEDVVVTLSHAGYVKYQPLSDYEAQRRGGKGK
                     SATKMKEDDFIEKLLVANTHDTILCFSSRGRLYQLKVYQLPQASRGARGTPIVNILPL
                     VKEENERITAILPIPNGEFSADKFIFMATASGVVKKVSLDAFSNVRASGLIALKLREG
                     DELIGVDITDGNSEIMLFSAQGRVVRFAETAVRAMGRTATGVRGIKLSTTEISSEEIE
                     EAEIIETDNEEAEDSSSVSLDKDRVVSLVIPRTEGDILTVTQNGYGKRTVISEYPVKS
                     RATKGVVSIKVNERNGKVVAAVQVEETDQIMLITDAGTLVRTRVAEVSLVGRNTQGVR
                     IIRTAEDEQVVSLERVCEPEDDENESLDALENAETAETSTEE"
     gene            8407..10371
                     /locus_tag="PXE50_000440"
     CDS             8407..10371
                     /locus_tag="PXE50_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5621377.1"
                     /translation="MALINLSNAYLGFGDHPLLDHTELHIEPGERVCLVGRNGAGKST
                     LMKILAGEVQLDDGKLVFEKDIVVTRLEQDPPRHIEETVFDYVAEGIAHLADLLKQYH
                     HISLQMQTDYSDELLAKLSAVQSQLEHANGWQFENRIQDTLKLLELAPDKRLCELSGG
                     WVRRAALARALVADPDVLLLDEPTNHLDIEAIAWLENLLLDFKGSIIFISHDRAFIRK
                     MATRIVDLDRGKLVSYPSNYDKYLEEKAEDLRVEALQNELFDKKLAQEEVWIRQGIKA
                     RRTRNEGRVRALKALREERRNRREVQGTAKIQIDNTARSGKIVFEVENAGYEIGGRTL
                     LKNFSTTILRGDKIALIGANGIGKTTLIKLLLGEIQPTSGSVRCGTKLEVAYFDQYRV
                     DLDPEKTVMDNVADGKQDVEVNGVKRHVLGYLQDFLFPPKRAMTPVKALSGGERNCLL
                     LAKLLLKPNNLLILDEPTNDLDVETLELLEEMLTDYQGTLIIVSHDRQFVDNTVTECY
                     FFEGEGVVNKYVGGYFDAKQQQENYFAATADKRLNSSKNLQKIEEKAPLAEQEKQKAD
                     QEKTKAEPTKKTKLSYKEQRELDELPAKMEQLEADIEALQAEVNSAEFFAKDPSYTNA
                     QLQKLADTEAALEQAFERWEALENIKNGNI"
     gene            10453..11211
                     /gene="tcdA"
                     /locus_tag="PXE50_000441"
     CDS             10453..11211
                     /gene="tcdA"
                     /locus_tag="PXE50_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA cyclic N6-threonylcarbamoyladenosine(37)
                     synthase TcdA"
                     /protein_id="HDL5621378.1"
                     /translation="MTERLDNYEQRFGGIGRLYTPEGLEKLRRSHICVIGIGGVGSWA
                     VEALARSGIGKITMIDMDDICVTNINRQIHAMSGTVAQLKTEAMKERIERINPECVVE
                     IIDDFLTQDNLADYLNRGYDYVIDAIDSLRVKAAMIAFCKRNKIKIITTGGAGGQTDP
                     TKIQITDLSKTVQDPLAARVRSLLRKEYGFSNKNKFGVECVSSTQQLIFPQMGEACEV
                     SATMNCANGFGAVTMVTATFGFFAVSRVIDKLLK"
     gene            11258..12625
                     /locus_tag="PXE50_000442"
     CDS             11258..12625
                     /locus_tag="PXE50_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LOG family protein"
                     /protein_id="HDL5621379.1"
                     /translation="MAIHRVNPKGSMEQLSHLEMELLAKNTQGNLHQLYRNCSLAVLN
                     SGVHTDDSRALLSQYPDFEIRLLTREKGVSLELHNPPETAFVDGKMILNIQYHLFAVL
                     RDIVFVNALKNAIRPLEETSLEALTTNTVFSILRNAKAIEMNTDPNLVVCWGGHSINE
                     TEYQYCRAVGQEFGLRELNIVTGCGAGVMEAPMKGAAIGHANQRYKNGRFIGITEPSI
                     IASEPPNPIVNELVIMPDIEKRLEAFVRLGHAIVVFPGGPGTLEELLYIIGIKLNPAN
                     HAQQLPLILTAPKESADYFYAIDQFIGETLGEEARSLYEIIIDDSVLVARKVKQAMIE
                     VKSSRYESGDAYNFNWSLKIEEDFITPFIPTHENMANLNLSLAQPKEQLAANLRRAFS
                     GIVAGNIKPETSDLIEKYGVFKLHGDRKLMEHIDKLLERFVVQHRMKIPTGEAYQPCY
                     EIVKG"
     gene            12645..14192
                     /locus_tag="PXE50_000443"
     CDS             12645..14192
                     /locus_tag="PXE50_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent endonuclease"
                     /protein_id="HDL5621380.1"
                     /translation="MYLKHIEISGFRGINHLSLQLRPNMVLIGENAWGKSSLIDALSL
                     IFNLEQALYQFQFKDFHIQYTDTPNQVRDIQLVFTFCEEHQHDLAVQFPAYLAQAAFY
                     IDNHRCVSLAVTGKLHGEQISTDYQFVDQSLKPIQIEQAENAIRQFIYHHPVYRLRDA
                     RLNNRVHNELLLKGSSQLEDDFQRELNALSSLLKYYFLTSQSRYLIKTSMQDTALWWE
                     KVKSLCLRLKQQPELVESAQQHISTLFLFNPRSTVIEKPIILFEDLNAQLHPRMIAIF
                     WELLGFLPSQRITTTNSIELLSQVPLREICRLVRHHDHTQAYWLERHSLGKEDLRKLT
                     FHIHHNRGLALFAKAWILVEGETEVWILQELARLLDIHLEMEGIKIVEFAQCGLRPLI
                     KYARAMGIEWYVLTDGDDSGKRYADTVKSMEEDFAHRLTMLPQKDIEHFFYKAGLRNV
                     FIQLANWRSQEKYPVSYIIKRAIQRSSKPDLAIALANEMGQRGEHSIPTLFKQLFADV
                     LALINKV"
     gene            14415..15449
                     /gene="metN"
                     /locus_tag="PXE50_000444"
     CDS             14415..15449
                     /gene="metN"
                     /locus_tag="PXE50_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein
                     MetN"
                     /protein_id="HDL5621381.1"
                     /translation="MIQLKNISKQFEVKGKKITALDNVNLEVPRGTIYGVIGASGAGK
                     STLIRCVNLLERPTIGQVIVDGQDLTAMSDKELIHARRNIAMIFQHFNLLSSQTVFEN
                     VALSLRLSNTPKEQVEKKVNELLDLVGLTDRKDVYPANLSGGQKQRVAIARALASDPH
                     VLLCDEATSALDPATTQSILQLLKDINKRLGLTILLITHEMEVVKRICDRVAVIDKGQ
                     LIESGSVSEIFSNPKTELAQKFIQSTFHFELPQEYTEQLSSSPTEHSKPIIKFEFTGR
                     SVDAPLLSMASKKFGIDFSILMSQIDYAGGVKFGFVIAEVSGNPDSIAEAKFYLIDNN
                     VKVEVLGYVG"
     gene            15439..16116
                     /locus_tag="PXE50_000445"
     CDS             15439..16116
                     /locus_tag="PXE50_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5621382.1"
                     /translation="MWADFMQEMTPQMWSLVWESTFETVYMGFVATALAVVIGLPIGF
                     LAFLTGKGEILENPRLHQVLDVVINIGRSIPFIILLIILLPFTRLVVGTTLGTTAAIV
                     PLSVSAIPFFARLTSNALLEIPSGLTEAAKSMGATNWQVVTKFYLPESLPILINGITL
                     TLVALIGYSAMAGAVGGGGLGNLAISYGEHRNMVYVKWIATIIIVAIVMISQKLGDHL
                     AKRYDHR"
     gene            16139..16972
                     /locus_tag="PXE50_000446"
     CDS             16139..16972
                     /locus_tag="PXE50_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family lipoprotein"
                     /protein_id="HDL5621383.1"
                     /translation="MSFKKILGVALVSALALTACKEEKKAESTAAPAAQAPAKIKVGV
                     MSGPEHTVAERAAQIAKEKYGLEVEFVLFNDYALPNTAVSKGDLDANAFQHKPYLDKD
                     SQSKGLNNLVIVGNTFVYPLAGYSKKVKNVSELAEGAVIAVPNDPSNLARALILLEKQ
                     GLIKLKDNTNLFSTSVDIIENPKNLKIKEVDTSIAAKALDDVDLAVVNNTYAGQVGLN
                     TQDHGVFVESKDSPYVNIIVARQDNKDAANVQNFIKSYQTEEVYQEAQKHFKDGVVKG
                     W"
     gene            17055..17885
                     /locus_tag="PXE50_000447"
     CDS             17055..17885
                     /locus_tag="PXE50_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family lipoprotein"
                     /protein_id="HDL5621384.1"
                     /translation="MNFKKLLGVALVSALALTACKDEKAQAPATTAKTENKAPLKVGV
                     MTGPEAQMTEVAVKIAKEKYGLDVELVQFTEYTQPNAALHSKDLDANAFQTVPYLEQE
                     VKDRGYKLAIIGNTLVWPIAAYSKKIKNISELKDGATVAIPNNASNTARALLLLQAHG
                     LLKLKDPKNVFATENDIIENPKNIKIVQADTSLLTRMLDDVELAVINNTYAGQAGLSP
                     DKDGIIVESKDSPYVNLVVSREDNKDDPRLQTFVKSFQTEEVFQEALKLFNGGVVKGW
                     "
     gene            17937..18728
                     /gene="metQ"
                     /locus_tag="PXE50_000448"
     CDS             17937..18728
                     /gene="metQ"
                     /locus_tag="PXE50_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter substrate-binding
                     lipoprotein MetQ"
                     /protein_id="HDL5621385.1"
                     /translation="MKIMKLAGAVAIFSLFLTACNDKAEKLKVGVISGPEHKVMEVAA
                     KIAKEKYNRDVELVVFTDYATPNAALDKGDLDLNAFQHKPYLDNQIQEKGYKLVPVGN
                     TFVYPIAAYSKKIKSLAELKDGDTIAVPNDPTNLARALILLEKQDLIKLRADAGLKAT
                     SVDIIENPRKLVIQEIEAPLLPRTLDDVAFSIINTTYAGQNGLTPTKDGIFVEDKDSP
                     YVNLIVARENNQHSEAVKDLVKAYQTEEVYNKANEEFKGAMIKGW"
     gene            complement(18773..19924)
                     /gene="metK"
                     /locus_tag="PXE50_000449"
     CDS             complement(18773..19924)
                     /gene="metK"
                     /locus_tag="PXE50_000449"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018356717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HDL5621386.1"
                     /translation="MAINLFTSESVSEGHPDKIADQISDAVLDEILKQDPKARVACET
                     YVKTGMALVGGEITTSAWVDIENLTRQVICDIGYTHSDMGFDAHSCAVLNAIGKQSPD
                     INQGVDRADPLEQGAGDQGIMFGYATNETEVLMPAPITYAHRLMEQQSKVRKSGKLDW
                     LRPDAKSQLTFAYENNKIIGIDAVVLSTQHAEHISQKELIEGVMEEIIKPVLPSEWLS
                     QNTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAA
                     YAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVSNEILVKLIYQNF
                     DLRPYGLIKMLDLIKPIYRETAAYGHFGRKHFPWEKTDKAEALRAGAGL"
     gene            complement(20107..20949)
                     /locus_tag="PXE50_000450"
     CDS             complement(20107..20949)
                     /locus_tag="PXE50_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin family protein"
                     /protein_id="HDL5621387.1"
                     /translation="MKVGLVLEGGGLRGIFTAGVLDVFLDEHIHIDGAIGVSAGALFG
                     VNLPSKQKGRALRYNKKYAKDKRYMGLHSLLTTGNIVNRDFAYYELPSKLDPFDQQAF
                     EDSGMDFWVTVTNVETGEPEYIKIDNVFEQMEAFRATSSMPIVSKIVEIEGKKYLDGG
                     VSDSIPVQKFIEMGYDKIIVVLTRPLEYRKKPSSMWLFKRFYKKYPKLVQRWENRYAE
                     YNQAVEQIIQLNEKQQIFVIRPSRTVKISRLETDVNKIQAMYDLGVEDAKNALAGLRA
                     YLAK"
     gene            21009..21326
                     /locus_tag="PXE50_000451"
     CDS             21009..21326
                     /locus_tag="PXE50_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family protein"
                     /protein_id="HDL5621388.1"
                     /translation="MADAEFMDFLLDQLSPISGLRSKKMFGEYCLFFDNKIVAIISKD
                     YRIFVKANPQTLPLFLAENAEQFHYFAKGKVQKMHYWSIPELAIEEADELVKWIRLGL
                     QAV"
     gene            21417..22130
                     /locus_tag="PXE50_000452"
     CDS             21417..22130
                     /locus_tag="PXE50_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease"
                     /protein_id="HDL5621389.1"
                     /translation="MNQKKLVSLIVVIVLAIISQIFSFFDKKEPSKAQEKSTQSSQSH
                     QVSTSSLGNYDVQMKNDRLKQHIVDTDYYTLALSWSPAFCQKQKRNNHGKIPSHLEYQ
                     CGGSADFGWVIHGLWPQSGKARSVDEHPRYCQGDLPMVAEQTIKQYLPESPGATLLQG
                     EWEKHGACAFNQADDYFAKQKELFNQLKLPDTEMSKLALFNWMRANNPHLQNVYLGGS
                     KDELYICYDKAFQPMDCPR"
     gene            22130..22624
                     /locus_tag="PXE50_000453"
     CDS             22130..22624
                     /locus_tag="PXE50_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HDL5621390.1"
                     /translation="MADLRQLKMQVQRQLKRDLERANHYFNTTFTPPSISYAVRGVKA
                     GVAYLERNEVRFNPVLLQENEQAFIRQVVPHELAHILVYQHFGRVQSHGKEWKMMMET
                     VLGVPAEIYHCFDTQSVQQQFSYQCACQTHQLSIRRHNAVMRDKKSYICRLCKTQLHF
                     VEKS"
     gene            22729..24009
                     /locus_tag="PXE50_000454"
     CDS             22729..24009
                     /locus_tag="PXE50_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDL5621391.1"
                     /translation="METIVIVGGGAGGLELATYLGNKLGRKQKAKVVLIDRNATHLWK
                     PLLHEVATGTIDEGTDALSYRAHAKNHSFEFQQGTLVAVDREKKTVSLAPIYNDQNQL
                     LVKERHISYDKLVIAIGSKSNDFGTKGVAENCIFLDGSEQAKDFQKRMMELFLRFSHS
                     ENKDVKIAIVGGGATGIELSAELYHVVKNLNSYGFGKLNRASLKVTLIEAGPRLIPAL
                     PEKVSVSAFHELKKAGVSVRLGTMITEARPDGLMTRLGEKIEADIMVWAAGVKAPEIT
                     REFGFETNRLNQIEIKDTLQTTVDESVFVIGDCASLIQDGKPIPPRAQAAHQMATRCG
                     KNIVALIEGKEMKPFRFNDKGSLLSFSKFGTVGNLMGNLVSGDMFIEGKIARLAYLSL
                     YRMHQVALHGCVKTGLIVLVGQINRFLRPTMKLH"
     gene            complement(24096..25133)
                     /locus_tag="PXE50_000455"
     CDS             complement(24096..25133)
                     /locus_tag="PXE50_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5621392.1"
                     /translation="MNVLKLISLKSILIASGIFLSAQAAQAEGRLTVYCSVQNNVCEE
                     MTKQFSHKYNVETKFIHGGTGTIFGKVKAEASNPQADIWYGGTIEPHFQAGELGLLEA
                     YRSPKQAEILPQFKSLVESEQGKFTSIVYMLVLGLGVNTEKLAKLGIEAPKKWEDLSD
                     PRLKGEVQLPDPRSSGTTYTFMTTLSTLWGEEKTFDYLKKLNNNVSQYVKSTLVTSNL
                     ARGESAVTVGFVHSYATEKEKGAPIEAIIPEGKVGYALGGVSIIKNARNLDNAKLFMD
                     WVLSKEAQEIPWKKHGVYQTPTNINAEVAPQSTKAEALDFVEIDYQKAGSSEEGKRLI
                     DKWLAEIKLAN"
     gene            25355..26053
                     /locus_tag="PXE50_000456"
     CDS             25355..26053
                     /locus_tag="PXE50_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HDL5621393.1"
                     /translation="MENSWKYAFKLITPIFMGYFAAGVAYGMLATNAGMPAWFTIVMS
                     FTVVSGTAQYAAIPFFVSGVGAVSVFLSTLLMSLRFSFYTLNMMEHKPISKAKSLVAI
                     AGLTDEGFAVLSSLPKEQKQALFFKIAVLCVAYWTFSTIVGVLLGDSVANYIPHLDFA
                     LPCLFAILAYEQYKNQKQWKPIVIALIGFLLARQITETSVLLVAILVAIVIVALLPQS
                     SSIKLEKGVENEHK"
     gene            26064..26366
                     /locus_tag="PXE50_000457"
     CDS             26064..26366
                     /locus_tag="PXE50_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlD domain-containing protein"
                     /protein_id="HDL5621394.1"
                     /translation="MFAALVLGSQICRFLPEFLPKKVLSSPILQKLNKMLPLVIMLLL
                     LLTSLNFPKNGEGFNLILAQILALIGVLGSYVWLKNTFLSVALGIFGVNVFLSLLG"
     gene            complement(26487..27788)
                     /locus_tag="PXE50_000458"
     CDS             complement(26487..27788)
                     /locus_tag="PXE50_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HDL5621395.1"
                     /translation="MSLFKFEERGSNARQEIIAGLTTFLAMVYSVIVVPGMLSQAGFP
                     AESVFIATCLVSGLGSILIGLWANAPMAIGCAISLTAFTAFSLVLGQQVSIPVALGAI
                     FLMGVVFTLISATGIRTWILRNLPSSIAHGAGIGIGLFLLIIAATNVKLVVNSGMDIP
                     VKLGDFTSFPVLVSLIGLAAIIGLEKLKVKGSILWVIIAITIVGLIFDPNVKYTGFFK
                     MPSFGENSQFLNLDIMGALNTAILPVVFALVMTAIFDATGTIRAVAGQAGLLDKDGQI
                     INGDKALTSDSFGSILSGLFGTAPAAVYIESAAGTAVGGKTGLTAVVVGIGFLFMLFF
                     QPLAFLVPSYATAPALMYVGLLMLSNVSKLDFSDFVGAMSGLVCAVFIVLTANIVTGI
                     MLGFATLVIGRLISGEANKLNLGTVIIAIILVAFYAFDLAI"
     gene            complement(27921..28895)
                     /gene="secF"
                     /locus_tag="PXE50_000459"
     CDS             complement(27921..28895)
                     /gene="secF"
                     /locus_tag="PXE50_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HDL5621396.1"
                     /translation="MAIENVQQDVAEIKLPYKLIPFMKYRYVGFIFSLIVTALCIFTI
                     ATKGFNWGLDFTGGTVIETQFSQPADLAKLRTELENSGYGNALVQTTGSQKDLMIRLA
                     ASAGDMSVGNKVMEMIHQKLDPNATIKSIEFVGPNVGEELTQGAIYATLATLAMLLIY
                     VGTRFEWRLAVGGIVALFHDVLVTIGIFSFLQIEIDLTFVAAILSVVGYSLNDSIVVF
                     DRVRENFSKVRRSSSIEIIDISLSQTLSRTLMTSVTTLFVVLALFYLGGPTLHSFSLA
                     LLIGIGFGTYSSIYIAIGVALQLGLKREHMVQPKVEKEGADQDAFIDY"
     gene            complement(28905..30746)
                     /gene="secD"
                     /locus_tag="PXE50_000460"
     CDS             complement(28905..30746)
                     /gene="secD"
                     /locus_tag="PXE50_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HDL5621397.1"
                     /translation="MLNRFPLWKNLMVIFVIAIGALYALPNLYGDDPSVQISGTRGQQ
                     ATPETLSQVQSTLSAMNIQPKSAVLENGSILVRLESSEQQLPAKEKISEALGNNYSVA
                     LNLAPATPQWLSDIGGSPMKRGLDLLGGVRFLMEVDMNTALAKQQDTLQDSLRSDFRK
                     EKLQYQAVKKGENFATEVEFADNDTAEKAVRLVRLSHPTLDILVNDNKVTLTPSAQAL
                     SESRTMAIEQNLSILRKRVEELGVSEPTIQRQGADRIVVELPGVQDTARAKELLGATA
                     TLEFRLVNTEANVASAAKGIVPADSGLQNTRDGEPVVLRRKPSLGGEHIIDATSGTDE
                     RGLPQVSIRLDTEGGEMMGEITKMAIQKPMATLYTEFKDSGRKDANGKVILEKHQEVI
                     NVATIQTRLGNQFQITGINSPAEAQNLAVLLRSGALIAPIVIVEERTIGASLGADNVK
                     QGMEASILGLGLTILFCLAFYKVFGIFASLALIVNMILTIGLMSLIGATLTMPGIAGI
                     VLAVGMSVDANVLIYERIKEEIRNGRPIQQAIHEGYNGAFSSIFDSNLTTILTSLVLY
                     GVGTGPVKGFAVTLALGVIISMFTAITGTRMLVNWVYGGKRVKKLWI"
     gene            complement(30786..31079)
                     /gene="yajC"
                     /locus_tag="PXE50_000461"
     CDS             complement(30786..31079)
                     /gene="yajC"
                     /locus_tag="PXE50_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HDL5621398.1"
                     /translation="MQQGGGMEMIFILIIFGAIFYFMIYRPQAKRQKQQRDLLASLTK
                     GDEVLTSGGLIGKITKVTADNDNIVIALNDTTEVTIKRDFVVAVLPKGSLKSL"
     gene            31280..31837
                     /locus_tag="PXE50_000462"
     CDS             31280..31837
                     /locus_tag="PXE50_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtfJ family protein"
                     /protein_id="HDL5621399.1"
                     /translation="MKKLFAQAVIFGAFFASSAFAHNVQLNQALPAVSVAKDGELAVA
                     GGKVSYKNWHSSSLAGKVRVIHHFAGRSSVKEKNEDLMTAIKNAGFDRSKYQTVTIVN
                     ADDAIVGTGVFVKNSVENGKLDNPHSQVVLDQQGSVKKAWGLKEKESFIAVLDKSGKV
                     QFTSEGKLSAKQIQEVIGLVKTLTQ"
     gene            complement(31878..32846)
                     /locus_tag="PXE50_000463"
     CDS             complement(31878..32846)
                     /locus_tag="PXE50_000463"
                     /EC_number="5.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-epimerase"
                     /protein_id="HDL5621400.1"
                     /translation="MKLFTLENAFLRITLSDVGASWLSCIVKMPNEEREVLVTTSAKN
                     WQKQTAFFGATIGRYANRIANAEYRLNGKTYQLAKNNGEHNLHGGELGADKIVWQLES
                     QSEQAVKFSYFFADGEEGFGGEVKAFVEYRLTENELQISFDAVANQDTPLCLTNHAYF
                     NLQGSETILDHELIINADGYLPVDASGIPNAPLKKVESTSFDFRNAKKIGQDLLADDD
                     QKAVKGYDHSFHLAKNSENPTACLAVEDLKMELRTSMPALQLYTGNWLKGQPNLTKGE
                     YEDYAGVALEPEFFPNSLNQPELLQFGGITKAGEEYHHTISYRFII"
     gene            complement(32972..34135)
                     /gene="galK"
                     /locus_tag="PXE50_000464"
     CDS             complement(32972..34135)
                     /gene="galK"
                     /locus_tag="PXE50_000464"
                     /EC_number="2.7.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactokinase"
                     /protein_id="HDL5621401.1"
                     /translation="MKPQEIALQQFEQHFGYKAERTVFAPGRVNIIGEHTDYNDGFVM
                     PCAINYGTAVSFAKRSDNKWRVFAIDLNQQDEFDLSQAIEPSEQKWANYVRGVVKFIQ
                     AKHPEFKQGADLAITSDVPMSSGLSSSAALEVSIGKTAQLLGDLPLSLPQIALIGQEA
                     ENKFVGCNCGNMDQLTSALGQQDHLVMIDCRSLEITPTPVPQGYSIAIINSNVKHDLV
                     TGEYNSRREQCEFAAHFFGKAKLRDVTAEQFIERASELSEENELAYKRAKHIISENQR
                     VLEAVEALKANDMVKLGELMAQSHDSMRDDFEITCPEVDCLAEIAQQAIGKNGGARMT
                     GGGFGGCVVCLVPNDKVEDLRQAVANNYEKQTGIKETFHVCTASDGVRECPAR"
     gene            complement(34145..35191)
                     /gene="galT"
                     /locus_tag="PXE50_000465"
     CDS             complement(34145..35191)
                     /gene="galT"
                     /locus_tag="PXE50_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-phosphate uridylyltransferase"
                     /protein_id="HDL5621402.1"
                     /translation="MSEFVLNDHPHRRFNPLKNQWILVSPHRAKRPWQGQQEEIVQDE
                     KPSYDPSCYLCPGNKRITGEQNPNYTKPFVFKNDFSALLPDTPAPIPNDDPLFQISHT
                     QGESRVICFSPDHSKTLPQLSIEEITDVVTVWQEQANELKEHYQWVQIFENKGSMMGC
                     SNPHPHGQIWASNFLPNEIAIEDECQAKYFAQYGSPLLLDYAQRELDKQERIVAETED
                     WIAVVPYWAAWPFETLLLPKAKQFKSITDLNEAEKADLALALKKLTTRYDNLFNISFP
                     YSMGFHFAPFNGKENAHWQLHAHFYPPLLRSATVRKFMVGYEMMAESQRDLTPEQAAE
                     RLNAVSDTKHYKDK"
     gene            35404..36255
                     /locus_tag="PXE50_000466"
     CDS             35404..36255
                     /locus_tag="PXE50_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF817 domain-containing protein"
                     /protein_id="HDL5621403.1"
                     /translation="MERLNKFDAWLMNHKPNARLSGASRLLTEFWFFGLKEARACLFA
                     GLFFIAMFSVPKTGLWGLPRYDILLIFAIVVQIAMVKLGLETWDELKAISLFHLVGFV
                     LEVFKTSSNIQSWAYPDFAYTKLFNVPLFTGFMYAAVGSYIIQAWRLFDLKIKSHLPY
                     WLATLTALMIYLNFFTHHYIGDYRWYIAAFALGLYARTFVFFTPYDITRKMPLLLSFF
                     LIGFFIWLAENIGTFAGIWRYPNQFGAWSMVHMSKWSAWALLVMMTFTIIVHLKHIKQ
                     TVRVSSD"
     gene            complement(36341..37426)
                     /locus_tag="PXE50_000467"
     CDS             complement(36341..37426)
                     /locus_tag="PXE50_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDL5621404.1"
                     /translation="MEYRYYITTALVIAVLQLFLFNFAKTVSWLFNLSSKNRKTVGIL
                     TFLVANGLVILHLTRTFALFRIMAFILVLLLFAFFISFFTACIYKIFNGNTTVNRWLK
                     IAYPFAFFGLLGLGYYNAYTPTVVHYSVKLDKPLEKPLRIGMASDLHLGKLFGTKQLD
                     QLAEIFNQQKVDLILLPGDIMDDNTEVYVADKMQPHLAKLKAPLGVYATLGNHDFFGA
                     QETIAKEITDAGITVLWDQTAEINGKFTLIGRNDDLVKNRPSAEQLLQNVNTKLPVIL
                     LDHRPTEIEQHAKLPIDIQVSGHAHKGQVFPASIITKLIYRLHYGYEKIGFGHYFVTS
                     GYGFWGVPMRLGSQSEVMIIDVEGENP"
     gene            complement(37448..38428)
                     /locus_tag="PXE50_000468"
     CDS             complement(37448..38428)
                     /locus_tag="PXE50_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HDL5621405.1"
                     /translation="MLFDSIQFSIGVTLPTILLMLFGIFPRRRKFIDDTFCNMASKVV
                     FNFTLPPMIFLNMLKSPLDFSSQINLISTGVGGSILIYLWAEWWAARHIENRRYRCIF
                     TQGTFRTNAAILGIALILNAYGDKALAAASVYISCLVITFNVLAVITLTSSLSEKKVN
                     FGRLILSILRNPLILAVIAGLTFNYFELSHQIPTPLESAGKLMASLTLPLALICTGAS
                     INFKQLKQFNQGVESTINKIVLFSASIRLIFAPIFLLLLGKFVFQLPPMELGIVFVAA
                     SAPVASATYAMTRNYGGDGEAAANLIGITTLGSMFSASIGLFLLRQIGWV"
     gene            complement(38531..39629)
                     /gene="prfB"
                     /locus_tag="PXE50_000469"
     CDS             complement(join(38531..39553,39555..39629))
                     /gene="prfB"
                     /locus_tag="PXE50_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014550889.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HDL5621406.1"
                     /translation="MFELNPIKNQLTDLSERTAVIRGYLDFEHKVERLEEVNAELEQP
                     DVWNKPEKAQALGKERAMLEQIVNTIKALEQGIEDVEGLIELAVEAEDQDTFNEAQVE
                     ADELEKKLADLEFKRMFSGPHDSADCYLDLQAGSGGTEAQDWTEMLLRMYLRWAESKG
                     FKAELMEASDGDVAGIKSATVKISGDYAYGWFRTETGIHRLVRKSPFDANNGRHTSFS
                     AAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQN
                     GRSQHQNKDQAMKQLKAKLYELEMSKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSRIK
                     DHRTGVEHRTTQQVLDGDLDKFVEASLKAGL"
     gene            39885..40793
                     /locus_tag="PXE50_000470"
     CDS             39885..40793
                     /locus_tag="PXE50_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WYL domain-containing protein"
                     /protein_id="HDL5621407.1"
                     /translation="MAKRPSDIDATLLQLEILRRIPKLPAKIDAKSLHQQLLDAGFER
                     DIRTVQRSLKMLCEHFDIECDERSKPFGYSWKIRSEGLALPILNEQQSLLLKLAEQQL
                     KYLLPANLMASMKPFFEQADRMVSGAKDKPEYQWLNKVCSTPTSLPLIPAKIKEEIFN
                     SVSQALFQNKLLKIEYQNQHGKKHQATIMPLAISQQGASIYLVCRYEGFDDNRLLALH
                     RIRKAEISTFSFERPKDFNLQAYQDAGHLGFGNGEKASLTFSISRDAGFHLTETPLAK
                     DQKILEESETHYRIQAIVADNDMLTW"
     gene            41094..41735
                     /locus_tag="PXE50_000471"
     CDS             41094..41735
                     /locus_tag="PXE50_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HDL5621408.1"
                     /translation="MPFQLTFCQQAGNQHQKNQDALFNGKAVYQWQLKNAESYLLDND
                     KVIFGVADGVSSHPRNHLASHYLMALLSQCQSLDSQWLRQAHGDFCEKLAKDYFGASC
                     TFVACELHHNGRGRMVNVGDSRAYKITANGEWQQLSFDHTILAEMKQKGLVKEGSNYA
                     SMYNGLTDCIVADFDADDFRIHIAEFQLEKGESILLCSDGLHEQLAPEAIQAI"
     gene            41902..>42107
                     /locus_tag="PXE50_000472"
     CDS             41902..>42107
                     /locus_tag="PXE50_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005637830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent deacetylase"
                     /protein_id="HDL5621409.1"
                     /translation="MKNDFHYAAELIRNADGILITAGAGMSVDSGLPDFRSVGGLWNS
                     YPPLKKFNLQFMQIATPLAYQERP"
BASE COUNT        12219 a         8553 c         9393 g        11942 t
ORIGIN      
        1 ggatttaatt tataaatgaa ttgactataa gcaatataat ctatcgaatt atctcttttg
       61 ttcaaggcaa gtatggatac ctgaccgcag gcctggagat agaacctaca tataatatgc
      121 tctactacat taagccataa aaaatagaaa atcaagtgtt tgttcaagtt tttatgttat
      181 tgaatttaca ataactacaa aaatttatct taattggctc gattgatttt tacacaaaac
      241 atagctaaca tatccaaaat cactcacatt aggagcttaa aaatgacagc gattactatc
      301 cctcaatttg aagaggtgac ttctaagcaa tttcaatctg agttcggcag aattgttgat
      361 atcgtaaaag gcaaaacccc tgtggcgatt acccaatatg gcagaccgac aatggtgctt
      421 tttccttacg atcaagcggt tgaagctcgg cgattattag caaaacagcg tttgcttgaa
      481 atgcttgcag agcgagataa gaatccgccg gcagctcttg cagaaatcac gcttgaagag
      541 ttggataaaa tgattgatga ggaacgtaat gcactctgat tatttagtga ttgatacgaa
      601 tattttgatt agtggtttat tgttcccaaa atcaaatccc aatttagcag tgaaaaaagc
      661 cttattaggc tataccattt gtgtctcgca agcgactttt gacgaatttt tagaagtctc
      721 cgctagaccg aaatttgcta aatatttcag tattcaggaa agggaagaat ttattgccaa
      781 tttgttggat gcagtaaagt ttgtggaaat taaagaaacg attacagatt gccaagatcc
      841 caaagataat aaatttttag aagtggcgat cagtgcaaaa gcgaagtatt tagtgacggg
      901 cgataaaaaa gatctcctca gtatgaaccc ttatcggaat gttgaaatta tttccgtcag
      961 cgaattttta gcggaaactc gctaatgaaa cggtttctca ctctttttct tctccttttt
     1021 tcatcttttt cattagccga aacccaccaa atcggcattc tcgctcagcg tggggaagcc
     1081 tacacccgca cccattggca gccttgggtg gattggttaa attcgcagtt tcccaacgag
     1141 cggtttgagc tggttccatt ggggattaac gaggcgagcc gccgggcgga gttggatttt
     1201 ctgctgacca atcaagctca gtttttctat ttgagtaacc aaaatgtgcg atggcttgcc
     1261 acgctcaaca gtccgttttc ggcaaatggt gagcaagggg cggtgggcag tagcatttgg
     1321 gtgcgtgccg acagccatta tcagcagtta agcgatctga aaaatcagac tatcagtgcg
     1381 gtggataacg atgctttcgg cggttttttg cttgggttgt atcagtttca tcaagcagga
     1441 atgcggcaaa atcgggattt ttcggtgcag tttagcggtt ttccggtgga aaatgcgttg
     1501 gctttgctgg cggaaaaaca ggtggaagcg gcgattgtac cggtctgttt gctggaagag
     1561 ttggagaaag agggcaagtt caagcggtcg gattttcgct taattttgca aaacccacag
     1621 gcgcagggtt gccttgccag cacgccgttg ttgccgaact ggtcgctggc ggcaatggaa
     1681 aatgtgccaa acgagctggc ggtacagctt gccacacgct tgctaaacag ccacaatccc
     1741 gacctacccc gctggacgtt gccgttttct tccgcccaag ccgatcacat tctgcgtgaa
     1801 ctgtatcgcc acccgcaaca aaaaagcctg tgggcaacgg tgctggattg ggttcgtctc
     1861 aataaattcg gcttgttggc ggtggtgttg ttcattttgc tcaaccttgt cgccctgcgt
     1921 tatcaggtct atcgcaaaag caaggcgtta cagcaggcac actgcaaaat gcagcagtat
     1981 cagcaggaac tgacccgagc cgaccgcctt gctttgttgg gcgagatgac aaccggtttt
     2041 gctcacgaac tgaaacagcc gttgtcggcg gtgcgaatgt acgccgaggg gctgaaaagc
     2101 caaaacagcg atccttatca acagcggatt ttggataagc tgattgcgca ggtagatcgg
     2161 gcagtgaaaa cgatgcagag cattcgggac tgggcgcaaa accgcccgag tggtgaaccg
     2221 caagcggtca ttttgaacca attgattact aatgtgatcg agtttgtggc ggtggaaaat
     2281 cgccagaatg cacaaatctc gctgattgcc gaccgcactt ttcggcttaa tttacacgcc
     2341 acggtactgg aacaagtact gacgaactgc ctgctcaacg ccctgcaagc cggtgcaagc
     2401 gagatatcgg tgcggttaca agcggtcgaa aacgggctgg aaattgcaat cgaagacaac
     2461 ggcggcggtt tttcccctgc ccagcttgaa tttccgtttg tgccatttcg caccgacaaa
     2521 ccacacggct tagggctagg cttggtgcta tgccaacggc tgatgcaatc gctcaacgga
     2581 cggattgtat tggcgaacgg ggagaacggg gcgaaggtag tgcttttact ccctcaaata
     2641 taaatgtagg ggcaggtcct gtgcctgccc gtaaatccta tcaaattcag ggcgggcaca
     2701 ggacccgccc ctacggaaaa aagaaaaaat gattattcac attcttgatg acgaagaaag
     2761 cattttagac gctatgtcgt tcctgcttgc cccgcttggg gtggaaatcc aaacgtggca
     2821 atccagccta gattttttgg cacaggcgga tttacaccgg caaggcgtgc tgttactaga
     2881 tattcgaatg ccgctgccag acgggcaaca ggttcatcaa caactgcgag aggcacaatc
     2941 gaccctggcg gtggtgatta tgaccgccca cggtgatgtg ccgatggcag tcgctgaatt
     3001 gaaaaaaggc gcagtggatt ttctgcaaaa gccggcaagt tttgaacagc taaaacaggc
     3061 gattgcacag gcggaaaaag taagtgaaaa agcggtgaaa attcgtgaaa tttcgcaaaa
     3121 ttacgccaaa ttgacggaaa aagagcgtaa ccttgtgcca ctgattatgc aaggtttcac
     3181 caataaacag atcgcagata aattagcgat ttcagtgcgt acggtggaag tacatcgagc
     3241 caatgtgatg gaaaaaatgc aggcggagag tttggcgggg ctggtgcaga tgatcgggga
     3301 gttacaatat aaaggtagcg gaaattgctc tgctaccttt agtttcgact tttgccgtat
     3361 taatttactt ctttaaactg aatcattccc gcttcggcaa aattgttatc gtcatcttcg
     3421 tataagaagg ttttggcttc aattttgaca tcatcaaaag cggtgtcgcc ttctatgcct
     3481 tcaatggttt gaccgtgttt aatcccttta aaatcaaaca atttcggatc gcataagtgg
     3541 gatggcacga tatcttgcaa agcactgaac attgtttcta aacgccccgg gtattggcga
     3601 tcccaagtat tcagcatttc tttcaccact tggcgttgta aattaggctg agaaccacac
     3661 agattacacg gaataatcgg gaactgcttg gcttcggcat atttgataat gtctttttct
     3721 ttacaatagg cgagtgggcg gatcacaatt tgcttgccgt catcagagat cagtttaggt
     3781 ggcatacttt tcattttgcc gccgtagaac atatttaaga ataaagtcgc cagcatatcg
     3841 tcacggtgat gccctaatgc aattttggtt gcacccaatt cggtggcggt gcggtataaa
     3901 atcccacggc gaagtcgtga gcaaagtgaa caggtggttt tgccctccgg aattttctct
     3961 tttacgatgc cgtaggtgtt ttcttccaca attttgtatt ccacgccaat gctttctaaa
     4021 tagcgaggca atacctcttc cggaaatccc ggttgctttt ggtctaaatt gaccgctacc
     4081 acactaaaat tcaccggtgc actttgctgt aaattgagca aaatatctaa cagcgtatag
     4141 ctgtctttac cgccggaaag gcagaccatt acacggtcgc cctcttcaat cataccaaaa
     4201 tcggcaatgg cattaccgac attacggcgt aaacgttttt gtaacttgtt gaaattataa
     4261 gtaatttttt tatcagattt ttgaatatcg tctgtcataa tagttgtact aggcttagaa
     4321 attagcggtg tatagtaaag atttcgcact attttgcaag ttaattattc ggcttcagcg
     4381 tagcgatata gttacaactc acatcattat tgagccaaaa tttttcggtt aatgggttga
     4441 aatggtagcc tctcatctct tggcaacgta aatcagcctg atcgcaccaa gctaacaatt
     4501 cggcaggctt gatgaatttt tcaaattcgt gcgtgccttt tggcaacatt ttcagcacat
     4561 attccgcccc gataattacc aacatatagg ctttaaaagt acggttgatg gtagagaaaa
     4621 acagcacgcc gtcaggtttg agcagggctt tacagctttg aatgatagaa agcggatcgg
     4681 gaacgtgttc cagcatttcc atacaagtaa tcacatcgaa tttttcttga ttacaagcgg
     4741 tcatttttgc taaaaaattt tcaatcgtgg tttgttggta atcaatctct aacccacttt
     4801 ctttggcgtg ctgctttgcc acttcaagcg gttgagaggt catatcgatg ccggtaacaa
     4861 tcgctccctg ttttgccatt gcctcactta aaataccgcc accacagccg acatctaaca
     4921 cctttttgcc aaataaaccg ttcgattttt ctaaaatata ggctaaacgc agtggattaa
     4981 gcagatgaat cggcttgaaa ctgccgtttg gatcccacca ggttttagcc atattttcaa
     5041 attttgtgat ttcttgctga tcgacgtttt gcataaactg ttcctatggt aaatttaggg
     5101 cattactata acgcatttag cctaaaagga aaatcagaat gacccgaatt aaccttgttc
     5161 cgccaacgga attatgcgat caacatctgc ttgccgaaca tcgtgaactt actcggattc
     5221 cgaatgcggt agcgaaaggc aaatttagcc taaaaggaca gccagaagat tacaaactgg
     5281 gcgagggaca cgttcggttt ttcttcaata aactcacgtt tttgaaaaag cgttacgatg
     5341 cgttacacga ggaatgttta gcaagaggtt ttaaggtgca atatttctgg gcggaacatt
     5401 taccacaaga tccctctctc tggctagatt atcagccgac tgaaaccgct ctgactgtaa
     5461 atcgggagcg aattgcatta agaatgccgg caaatccacg ttttagcgaa agaaaatgac
     5521 cgcttgtacg cctttttgtt gctttttatg ctataatctc gccaattttt tcgccttatt
     5581 taaggctctt ttactaataa aattaggaaa tttcaatgag cgaattagcc aaagatatta
     5641 ttcccgtaag tattgaggac gaattaaaaa cctcttacct tgactatgcg atgtcggtga
     5701 ttgttgggcg tgccttgcct gatgtacgag acggtttaaa gccggtacac cgccgagtgc
     5761 ttttttcaat ggatcaaaac agcaacacct ataataagcc gcacgttaaa tctgcccgtg
     5821 tggtcggtga tgtgatcggt aaatatcacc cacacggtga ctctgcggtg tatgacacta
     5881 ttgtgcgtat ggctcaaccg ttctcactac gttatatgtt ggtggacggg caaggtaact
     5941 ttggttctat tgatggcgat gcaccggcag caatgcgtta taccgaagtg cgtatgcaga
     6001 aaattacgca ggaattatta accgatctcg ataaagaaac ggtggatttc tcaccgaact
     6061 atgacggcaa agagatgatt cctgatgtat tgccaaccaa aattccggct ctgttagtca
     6121 atggttcttc agggattgcg gtcggtatgg caaccaatat tccacctcat aatttaggcg
     6181 aagtattaga tggttgcttg gcgtatattg aaaatgaaca gattagtgtt gaagagctaa
     6241 tgcgttatat cccggggccg gatttcccga ccggggcgat tatcaacggt cgtaaaggga
     6301 ttgaagaggc ttaccgcacc ggtcgtggca aggtgtatgt gcgcgcgaaa gccagcgtgg
     6361 aaacaactga taaagggcgt gagcaaattg ttgtaaccga actgccatac caagtgaata
     6421 aggcaaaatt aattgaaaaa attgccgagc tggttaaaga gaagaaaatc gaaggcatca
     6481 gcaaaattga tgactattcc gataaaaaag ggatttcgat tgttattgaa gtcaagcgtg
     6541 atgcagtggg tgaagtggtg ttaaaccacc tttattcttt aacccaaatg caggtcacgt
     6601 ttggtatcaa tatggtggcg ttagataatg ggcagccaaa agtgctgaac ttacgccaga
     6661 tcatcgaagc ctttgttaaa caccgtcgtg aagtggtcac acgccgtacg atttttgaat
     6721 tgcgtaaagc ccgtgaacgt gcccatattt tagaaggttt ggcgattgcg ttagcgaata
     6781 tcgacccggt aattgaatta attcgagcct caaaaaccgc agaagaagcc cgtgaaggct
     6841 tattggctcg cccttgggca ttaggcaatg ttgcaccaat gttagaggct gctggtgttg
     6901 gtgcttcccg accggaagat ttacctgaac acttaggagt gcgtgatggc gaatactatt
     6961 tatctgaagc tcaagccaga gcgattttag agctacgctt acaccgctta accggtttag
     7021 aacacgagaa aatcgttgaa gaatacaaag aactcttaac tgaaattggc gaattaatcc
     7081 acattttaac cagcccagaa cgcttaatgg aagtgatccg tgaagagtta gaacgtgtaa
     7141 aaaccgattt taatgatgaa cgccgtactg aaattaccgc agcctctggc gacatcaaca
     7201 ttgaagactt aatcgcacaa gaagatgtgg tggttacgct ttctcacgcc ggctatgtga
     7261 aatatcagcc gttatccgac tacgaagcac aacgccgtgg cggtaaaggt aagtcggcaa
     7321 ccaagatgaa agaagatgat ttcatcgaaa aactcttggt ggcaaacacc cacgacacca
     7381 ttctttgctt ctcaagccgt gggcgtttat atcaattaaa agtgtatcaa ttaccgcaag
     7441 caagccgtgg ggcaagaggc acgccgattg tgaatattct gccgttagtg aaagaagaaa
     7501 acgaacgtat taccgcgatt ctaccgattc caaacggtga atttagtgcc gataagttta
     7561 tctttatggc aacagctagc ggtgtagtga aaaaagtttc ccttgatgcc tttagcaacg
     7621 tgcgtgcaag cggtctgatt gcgttaaaac ttcgtgaagg cgatgagctg atcggggtag
     7681 atattactga tggtaacagc gaaattatgt tgttctcggc acaagggcga gtagttcgct
     7741 ttgccgaaac agcagttcgt gcgatgggac gtaccgccac cggcgtacga ggtattaaac
     7801 tttctaccac cgaaatttca agcgaagaaa ttgaagaagc tgaaattatt gaaactgaca
     7861 atgaagaggc agaagattcc tccagcgtca gccttgataa agaccgtgtg gtttctttag
     7921 tgattcctcg caccgaaggc gatattttaa ccgtcaccca aaacggctac ggtaaacgta
     7981 cggtgattag cgaatatccg gtgaaatccc gagcaaccaa aggggtcgtt tcgattaaag
     8041 tgaatgaacg aaacggcaaa gtggttgcgg cagttcaagt agaggaaacc gaccaaatta
     8101 tgttgattac cgatgccggc acgctggttc gcacccgagt ggcagaagtc agcctcgttg
     8161 gacgaaacac ccaaggcgta cgtattattc gcaccgcaga agacgaacaa gttgttagcc
     8221 ttgaacgagt ctgcgagcct gaagacgatg aaaatgaaag cctagacgca ttagaaaatg
     8281 ccgaaacagc agaaacatca actgaagaat aatcttaact aaacaagcgg tcgaattttc
     8341 acaatttttt gcaaaaatag aaggaaattc gaccgttttt ggatcataca gtagataata
     8401 aaaactatgg cacttatcaa tctttccaac gcctatttag gctttggcga tcatccttta
     8461 ttggatcata ctgaattaca tatcgaaccc ggcgagcggg tttgtttggt ggggcgtaac
     8521 ggggcgggta aatcgaccct gatgaaaatt ctggcgggcg aagttcagct tgatgacggc
     8581 aagttggtat ttgaaaaaga cattgtcgtt acacgtcttg aacaagatcc gccccgccat
     8641 attgaagaaa cggtgttcga ttatgtggcg gaggggattg cccatcttgc cgacttattg
     8701 aagcaatatc accacatttc cctgcaaatg cagaccgatt acagcgatga actgctcgcc
     8761 aaactttcag cggtgcaatc gcaattagaa cacgctaacg gttggcagtt tgaaaaccgc
     8821 attcaagaca ccttgaaact gctggaactc gcccccgaca aacgcctgtg cgaactctca
     8881 ggcggttggg tacgccgtgc ggcattggct cgggcgttgg ttgccgatcc tgatgtattg
     8941 ctgttggacg aaccgaccaa ccacctcgac attgaggcga ttgcgtggct ggaaaatctg
     9001 ttattggatt tcaaaggcag tattattttt atctcgcacg accgtgcctt tatccgcaaa
     9061 atggcgactc ggattgtgga tttagatcga ggcaaattgg tttcctaccc aagcaattac
     9121 gataaatact tggaagaaaa agccgaggat ctgcgagtag aagcgttgca aaatgagctg
     9181 ttcgacaaaa aactcgccca agaagaagtc tggatccgtc aagggattaa ggcaagacgc
     9241 acccgaaacg aagggcgtgt gcgagcgttg aaagcgttgc gtgaagagcg tagaaaccgc
     9301 cgagaggtac aaggcacggc gaaaattcag atcgacaaca ccgcacgcag cggcaaaatt
     9361 gtgtttgaag tggaaaatgc cggctatgaa atcggcggca gaaccctgct gaaaaatttc
     9421 agcaccacca ttttgcgtgg cgataaaatt gccctgattg gagcgaacgg gatcggcaaa
     9481 accacgctga tcaagctgtt acttggcgaa attcagccga catctggttc agtgcgttgt
     9541 ggcacaaaat tggaagtggc gtacttcgac caataccgag tcgatcttga ccctgaaaaa
     9601 accgtgatgg acaacgtggc agacggcaag caagatgtag aagtaaacgg ggtgaaacgc
     9661 cacgttcttg gctatctgca agacttcctg ttcccgccaa aacgggcgat gacaccggtg
     9721 aaagccctct cgggtggtga acgcaactgc ttgttgctgg caaaactgtt actcaaaccg
     9781 aacaacttgc tgattttgga cgaaccgacc aacgatttgg acgtggaaac cctcgaactg
     9841 ctggaagaga tgctcaccga ctatcaaggc accctgatta ttgtgagcca cgaccgtcaa
     9901 tttgtggata ataccgtaac cgaatgctac ttcttcgagg gcgaaggcgt ggtgaataaa
     9961 tatgtcggcg gctatttcga tgccaaacaa cagcaggaaa attacttcgc cgccactgcc
    10021 gacaagcggt taaattcgag taaaaatttg caaaaaatag aggaaaaagc accgcttgcg
    10081 gagcaagaga aacagaaagc cgatcaggaa aaaacgaaag cagagccgac gaagaaaacc
    10141 aaactttcct acaaagaaca gcgtgaactg gacgagttac cggctaaaat ggaacagctt
    10201 gaagccgaca ttgaagccct gcaagccgaa gtaaatagtg ccgaattctt cgccaaagat
    10261 ccaagctaca ccaacgccca gctacaaaaa cttgccgata ccgaagccgc gttagagcaa
    10321 gcctttgagc ggtgggaagc gttggaaaat attaaaaacg ggaatatcta atgtaggggc
    10381 gaatgattat tcgcccttga tggataaaat gattgggcga aaaatttttc gcccctacaa
    10441 atgtgaagca aaatgacaga aagattagat aactacgaac aacgttttgg tggcattggt
    10501 cgcctttata cgccggaagg attggagaaa ctacgccgtt cgcatatttg cgtgattggg
    10561 attggcgggg ttggctcgtg ggcagtggag gcattggctc gctcaggtat cggtaagatc
    10621 acgatgatcg atatggacga tatttgcgtg accaatatca accgccaaat tcacgcaatg
    10681 agtggcacgg tggctcaact gaaaaccgaa gcgatgaaag agcggattga gcggatcaac
    10741 cctgaatgtg tggtggaaat tattgatgat ttcttaacgc aggataatct cgcagactac
    10801 ctcaatcgag gatatgacta tgtgatcgat gcgattgaca gtttgcgggt aaaagcggcg
    10861 atgattgcgt tttgtaaacg caataagatc aaaattatca ccaccggcgg ggcgggcggg
    10921 cagaccgatc cgaccaaaat tcaaattacc gatttaagca aaacggtgca agatccgttg
    10981 gcggcaaggg ttcgtagcct gttgcgtaaa gagtacggtt tcagcaataa aaacaaattc
    11041 ggcgtggagt gcgtttcttc gactcagcaa ctgattttcc cacaaatggg tgaggcctgt
    11101 gaggtgtcgg caacaatgaa ctgtgccaac ggctttggag cggtgacaat ggtgacggca
    11161 acgttcggct tttttgcggt gagtcgggtg attgataaac tattaaaata acaagcggtc
    11221 atattaaatg aattttttgc aaatcaagga gtaaataatg gcaatacatc gagtcaaccc
    11281 gaaagggagt atggaacagc tttcccattt ggaaatggag ttgttggcaa agaatacgca
    11341 gggtaatttg catcaacttt atcgtaattg ctctttggcg gtgctaaatt ccggtgtgca
    11401 taccgatgac agccgagcgt tgttaagcca ataccctgat tttgaaatcc gcttattaac
    11461 ccgtgaaaaa ggcgtgtcgc ttgaattgca taatccaccc gaaactgcgt ttgttgacgg
    11521 caagatgatt ttgaatattc aatatcacct ttttgcggtg ctgcgggata ttgtgtttgt
    11581 gaatgcgtta aaaaatgcga ttagaccgct tgaagagact tctttagaag ccttaaccac
    11641 gaataccgta ttttcgattt tgcggaatgc gaaagcgatt gaaatgaata ccgacccaaa
    11701 tttggtggtg tgctggggag ggcattcgat taatgaaacc gaataccaat attgccgtgc
    11761 cgtcgggcaa gagtttggct tgcgtgagct gaatattgtg accggttgcg gagccggtgt
    11821 gatggaagcc ccgatgaaag gagcggctat cggacacgcc aatcaacgtt ataaaaacgg
    11881 gcgttttatc ggcattaccg agccgtctat tattgcctcc gagccgccaa acccgattgt
    11941 gaatgaattg gtaattatgc cggatattga aaaacggttg gaagcctttg tgcgtttagg
    12001 gcacgccatt gtggttttcc cgggcgggcc gggaacgctg gaagagttgc tgtatattat
    12061 cggtattaag ttaaacccgg ctaaccatgc tcagcaatta ccactgattt taaccgcccc
    12121 gaaagaatcg gcagactatt tctatgccat cgatcaattt attggcgaaa ctttaggcga
    12181 agaagctcgc agtttgtatg aaattattat tgatgactcg gtgttggtgg ctcgtaaagt
    12241 caagcaagcg atgattgagg taaaaagcag ccgttatgaa agtggcgatg cttataattt
    12301 caactggtcg ttaaaaattg aggaagattt tattacgcca tttattccaa cccacgaaaa
    12361 tatggcaaac ctgaatttaa gtttagcaca gccaaaagag cagctggctg cgaatttaag
    12421 acgggcattt tcagggattg ttgcaggtaa tattaagccg gagacctccg atttaattga
    12481 gaaatatggg gtgtttaaat tacacggcga tcgtaaatta atggagcata tagataaact
    12541 gttggagcgt tttgtggttc aacaccgtat gaaaattcca acgggtgagg cgtaccaacc
    12601 ttgctatgaa attgtaaaag ggtaatgcta acaaggggta aggtatgtat ttaaagcata
    12661 ttgaaatcag tggctttcgt ggtattaacc atttatcgct ccagctacga ccaaatatgg
    12721 tattgattgg cgaaaatgcg tgggggaaat ccagtctgat tgatgcatta agcctgattt
    12781 ttaaccttga gcaggcgttg tatcaatttc agttcaaaga tttccatatt caatacaccg
    12841 atacccccaa ccaagtgcgg gacattcaac tggtgtttac cttttgtgaa gagcatcagc
    12901 acgatttagc ggtgcaattt cccgcttatt tggcacaagc cgcgttttat attgataatc
    12961 accgctgtgt ttcgcttgcc gtaaccggaa aattacacgg agagcagatt agcaccgact
    13021 atcaatttgt ggatcaaagc ctaaaaccga tccagataga acaagcggaa aacgccattc
    13081 ggcagtttat ttaccatcac cctgtttatc gcctgcgtga tgcaaggctc aataacaggg
    13141 tgcataatga attattactt aaaggatcgt ctcaacttga agacgatttt caacgtgaat
    13201 taaacgccct ctcttcgcta ctgaaatact attttctaac cagccaaagt cgctatttga
    13261 tcaaaaccag tatgcaagac accgcattgt ggtgggaaaa agtaaaatcc ctctgtttac
    13321 gcctaaaaca gcagccggaa ttggtcgaat ctgctcagca gcatatttct actctatttt
    13381 tgtttaatcc tagatctaca gtaatagaaa agccgattat tttatttgaa gatctgaatg
    13441 ctcaactaca ccctcgaatg attgcgattt tttgggaact gctcggtttt ttacccagcc
    13501 aacggatcac cactactaat tctattgaat tgttatcgca agtgcctctg cgtgaaatct
    13561 gccgtttggt gcgtcatcac gatcataccc aagcctattg gcttgaacgc cacagtttag
    13621 gcaaggaaga tttgcgaaaa ttaacctttc atattcacca taatcgtggc ttggcactgt
    13681 ttgctaaagc gtggattttg gttgaggggg aaacggaggt ttggattttg caagagctgg
    13741 cgagattatt agatattcat ttggaaatgg aagggatcaa aatcgttgaa tttgctcagt
    13801 gtggcttacg tccgttaatt aaatacgcca gagcaatggg gatcgaatgg tatgtgctga
    13861 ctgacggtga cgattccggc aaacgttatg cagatacggt aaaaagtatg gaagaggatt
    13921 ttgctcaccg gctcacgatg ttgccacaaa aagatatcga acattttttc tacaaagcag
    13981 gcttgcggaa tgtgtttata cagcttgcaa attggcgttc acaagaaaaa tatccggtgt
    14041 cctacatcat taaacgagcg attcaacgaa gctcaaagcc tgatttagcc attgcattag
    14101 ccaatgagat ggggcaacgg ggagagcatt caattccaac tttatttaaa caattatttg
    14161 cagatgtgct ggcattgata aacaaagtat agaatacaag cggttaaatt tgacaaaaaa
    14221 ttgccaattt tgaccgcttg tttgcttgtg atgaaaacca atcatacaaa actctaattt
    14281 atttcaagtg caagctatta ttttatgcgt tatgcttatt tggaataaaa aaatcgggtt
    14341 agttgattga catagcattc tagacgtcta aaataaccaa aaataatagt taattgaatg
    14401 tggataaata gaaaatgatt cagctgaaaa atatcagcaa acaatttgag gtaaagggca
    14461 aaaaaattac cgctctggat aatgtaaacc tagaagtacc aagaggcact atttatggtg
    14521 tcattggggc atcaggggca ggaaaaagta ccttaattcg ctgtgtaaat ttattagaac
    14581 gcccaacaat cgggcaagtg attgtcgatg ggcaagattt aacggcaatg tcggataaag
    14641 agttgattca cgctcgccgt aatattgcaa tgattttcca acattttaat ttgctttcat
    14701 cacaaactgt atttgaaaac gtggcgttat cgttgcgttt aagcaatacg ccaaaagagc
    14761 aagttgagaa gaaagtcaat gagctgttgg atttagtggg gttaacagat cgtaaagatg
    14821 tttaccctgc aaatctttcc ggtgggcaga aacagcgtgt agcgattgct cgtgcgttag
    14881 ccagcgatcc acacgttttg ttgtgtgatg aagcgaccag tgcgttagat ccggcgacta
    14941 cgcaatccat tttgcagcta ttaaaagata ttaataaacg tcttggtttg acgattttat
    15001 taatcactca cgaaatggaa gtggtaaaac gcatttgtga ccgagtagca gtgattgata
    15061 aagggcagtt gattgaatct ggctcggtaa gtgaaatttt ctcgaatccg aaaaccgaat
    15121 tagctcagaa atttattcaa tcgactttcc attttgaatt accgcaagaa tataccgagc
    15181 agctttcaag ttcgccgact gaacatagta agccgattat taaatttgag tttaccggac
    15241 gttcggtgga tgcacctttg ctttcaatgg catcgaagaa attcggcatt gattttagta
    15301 ttttgatgtc gcaaattgat tatgcaggcg gggtcaaatt tggatttgta attgcagaag
    15361 tgagtggtaa tccggattcc attgcagagg caaaatttta tttaattgat aacaatgtaa
    15421 aagtagaggt gttaggctat gtgggctgat tttatgcagg agatgacgcc acagatgtgg
    15481 agcttagtat gggaatctac ttttgaaacc gtttatatgg gctttgtggc aacggcattg
    15541 gcggtagtca tcggtttacc gattggtttc ttggcgtttt taaccggtaa aggcgaaatt
    15601 ttagaaaatc cgagattaca ccaagtgtta gatgtcgtta ttaacatcgg gcgttcgatt
    15661 ccgttcatta ttttattgat tattttgttg ccatttactc gcttagttgt gggcacaaca
    15721 ttaggcacaa cggcagcgat tgttccttta agtgtttcgg ccattccgtt ttttgcccgt
    15781 ttaacttcaa atgcgttgct tgaaattccg tccggtttaa cagaagcggc aaaatcaatg
    15841 ggagcaacaa attggcaggt agtgacaaaa ttttatttac cggagtcatt accgattttg
    15901 attaatggca ttacgctaac gctggttgct ttaattggct actcagcaat ggcgggggct
    15961 gttggtggcg gcggtttagg caatttagcg attagctatg gcgaacaccg taatatggtg
    16021 tatgtgaaat ggattgctac cattattatt gttgcgattg tgatgattag ccaaaaattg
    16081 ggtgatcatt tagcaaaacg ttacgatcat cgttaatttt atttaaaaag aggtttctat
    16141 gagtttcaag aaaattttag gcgttgcatt ggtttctgca ttagcattaa ccgcttgtaa
    16201 agaagagaaa aaggcagaat ctaccgctgc tccggcagct caagctccgg ctaaaatcaa
    16261 agtaggggta atgtcaggcc ctgagcatac cgttgcagaa cgtgcagcac agattgcaaa
    16321 agaaaaatat ggtttagaag ttgagttcgt tttatttaac gactacgctt taccgaatac
    16381 tgcagtaagt aaaggtgatt tagatgcaaa cgcattccaa cacaaaccat atttagataa
    16441 agacagccaa tcaaaaggtt taaacaactt agtgattgtg ggtaacacct ttgtttatcc
    16501 gttagcgggc tactctaaaa aagtgaaaaa tgtgtctgag ttagcagaag gtgcggtaat
    16561 tgcagtacca aatgatcctt caaacttagc tcgtgctttg attttattag aaaaacaggg
    16621 gttaattaaa ttaaaagata ataccaattt attctcaact tcagtggata ttatcgaaaa
    16681 tccgaaaaac ttaaaaatta aagaagtgga tacttcaatt gccgcaaaag cgttagatga
    16741 cgtagattta gcggtggtaa ataacactta tgccgggcag gtaggcttaa atacccaaga
    16801 tcacggtgta tttgttgagt ctaaagattc accgtatgtg aatattattg tggctcgcca
    16861 agacaataaa gatgcagcta atgtacaaaa ctttattaaa tcttaccaaa ccgaagaagt
    16921 gtaccaagaa gcacaaaaac actttaaaga tggtgtagta aaaggttggt aatttagctg
    16981 atttttactt aaatggcgat taagcgctag gttaatcgcc attttcatct ttaaaatata
    17041 ggaaggagca aacaatgaac tttaaaaaat tattaggtgt ggcgttagta tctgccttag
    17101 cacttactgc gtgtaaagat gaaaaagcac aagcacctgc tacaacagct aaaactgaaa
    17161 acaaagcccc attaaaagtg ggtgtgatga ccggccctga agcccaaatg accgaagtgg
    17221 cagtgaaaat tgcaaaagag aaatatggct tagatgtaga gttagtgcag tttactgaat
    17281 acactcaacc aaatgccgca cttcattcta aagatttaga tgctaacgcg ttccaaacgg
    17341 tgccttattt agagcaagaa gtgaaagatc gtggttataa attagcgatt atcggcaata
    17401 cgctagtatg gccaatcgcg gcttattcta aaaaaattaa aaacatttcc gagttaaaag
    17461 acggagcgac tgttgcgatt ccaaacaatg caagtaatac tgctcgtgcg ttattattgc
    17521 ttcaagctca cggtttattg aaattaaaag atccgaaaaa tgtgtttgct accgaaaacg
    17581 atattatcga aaacccgaaa aatatcaaaa tcgtacaggc ggatacctca cttttaaccc
    17641 gtatgttaga tgatgtagaa cttgcggtaa tcaacaacac ttacgcaggt caagctgggt
    17701 taagtccgga taaagacggt attattgtgg aatctaaaga ttcaccgtat gtgaatttag
    17761 tggtaagtcg tgaagataat aaagatgacc cacgcttaca aacttttgtg aagtcattcc
    17821 aaaccgaaga agtattccaa gaagcgttaa aattatttaa cggtggtgtg gtgaaaggtt
    17881 ggtaatcagt tggacggcat attctgccgt ccttttctta aaaggagaaa cagataatga
    17941 aaataatgaa attagccggt gcagttgcaa ttttctcgct ttttttaacc gcttgtaatg
    18001 ataaagccga aaagttgaaa gtcggtgtga tttccggccc tgaacataag gtaatggaag
    18061 tggcggcaaa aattgcaaag gaaaaatata accgtgatgt tgaattagtg gtatttaccg
    18121 attatgccac gcctaatgca gctttagata aaggcgatct tgatttgaat gctttccagc
    18181 ataaacctta tttagataac caaattcagg aaaaaggcta taaattagtg ccggtcggca
    18241 atacttttgt ttatccgatt gcggcttatt ccaaaaaaat taaatcgctg gcagagttga
    18301 aagatggtga tactattgca gtgcctaatg atccgactaa tttagcccgt gctttaattt
    18361 tattggaaaa acaagattta attaagctgc gagcagatgc aggcttaaaa gcaaccagtg
    18421 tggatattat tgaaaaccct cgtaaattgg tgatccaaga aattgaagca ccattattgc
    18481 ctcgaacgtt ggacgatgtt gccttttcga ttattaatac tacctacgca gggcaaaacg
    18541 gtttaacgcc aaccaaagac ggaatattcg ttgaagacaa ggattcgcct tatgtgaatt
    18601 taattgttgc ccgtgaaaat aaccaacatt ctgaagccgt aaaagatttg gtgaaagcct
    18661 accaaacaga agaggtgtat aacaaagcga atgaagagtt taaaggggcg atgataaaag
    18721 gctggtaatt gaagataaat aaggcataga ttcctatgcc ttacttttta tgttacagac
    18781 ctgctccggc tcttaatgct tcggctttgt cagttttttc ccaaggaaaa tgtttacgac
    18841 cgaagtgtcc gtaggcagcg gtttcacggt agattggttt gattaaatct aacattttga
    18901 ttaagccata cgggcgtaag tcaaagtttt ggtagattaa tttcacaagt atttcgttgc
    18961 tcactttacc tgtgccgaag gtttcgacca taattgatgt tgggtcagcc accccgatag
    19021 cataagaaag ttggatctca cagcgatcgg ctaagcctgc ggcaacgata ttttttgcga
    19081 cataacgagc agcataagca gcagagcgat ccacttttga cgggtcttta ccagagaatg
    19141 caccaccacc gtggcgagcc gcaccaccgt aggtatctac aatgatttta cgcccggtta
    19201 aaccacagtc acccattgga ccgccaatca caaaacgacc ggttgggttg atgaaatatt
    19261 tggtgttttg gctgagccat tcgcttggta gtaccggttt gatgatctct tccatcaccc
    19321 cttcaattaa ctctttttgc gaaatatgct ctgcgtgttg tgtagaaagc actacggcat
    19381 caatgccgat aattttattg ttctcataag caaatgttaa ttggctttta gcgtcagggc
    19441 gtaaccaatc gagtttgccc gatttacgca cttttgactg ctgttccatt aagcggtgtg
    19501 cgtaagtaat tggagccggc attaacacct cggtttcatt ggtagcgtag ccaaacataa
    19561 tcccttggtc gcccgcacct tgctctaacg gatcggcacg gtcaacgccc tggttgatgt
    19621 ccggagattg tttaccaatc gcatttaata ccgcacaaga gtgagcatca aagcccatat
    19681 cagagtgagt atagccgatg tcgcaaatca cttggcgggt taagttttca atatccaccc
    19741 acgcagaggt agtgatttct ccccctacta atgccatacc ggttttcaca taagtttcac
    19801 aagcaacgcg tgctttaggg tcttgtttta aaatttcatc taataccgcg tctgaaattt
    19861 ggtctgcgat tttatccgga tgcccttctg aaaccgattc agaagtaaat aaattaattg
    19921 ccatttgtat tcctctctat cttaaatatg gattattaat agtaggggcg ggtccagtgc
    19981 ccgcccataa attatataaa atgtttggac aggcacagga ccggtcccta taaaatttgt
    20041 ttggaagtgt ttccgtctag acgtctataa tatatttttt gaacgtttta ggcaaataga
    20101 atttgtttat ttggctaaat atgcccttaa accagccaac gcatttttgg catcttctac
    20161 ccctaaatcg tacattgctt gtattttatt tacatccgtt tcaaggcgac tgattttgac
    20221 tgttctgctt ggacgaatca caaaaatctg ttgtttttca ttgagttgaa taatctgctc
    20281 aacggcttga ttatattccg catagcggtt ttcccagcgt tgcactaatt tcggatattt
    20341 tttataaaaa cgtttaaaca gccacatcga gcttggtttc ttacggtatt caagtgggcg
    20401 agtaagcacc acgataattt tgtcatatcc catttcaata aatttctgca ccggaatact
    20461 gtctgacaca ccaccgtcta aatatttttt accctcaatt tcgactattt tggatacaat
    20521 cggcattgag gaagtagctc gaaaggcttc catttgctcg aacacattgt caattttgat
    20581 gtattcgggc tcaccggttt cgacattggt tacagtaacc caaaagtcca taccggaatc
    20641 ctcaaaggct tgttggtcaa acggatccag tttggaaggg agttcatagt aagcaaaatc
    20701 ccgattaacg atattgccgg tggtaagcaa gctgtgtaac cccatatacc gcttatcttt
    20761 agcgtatttt ttgttgtatc gcaacgccct acctttttgt tttgaaggca aattcacgcc
    20821 aaataacgca ccggctgaaa caccgattgc tccatctata tgaatatgtt catctaaaaa
    20881 tacatctaac acgccggcag taaaaatacc tcgcaaacca ccgccttcca gcactaatcc
    20941 aactttcata tcattctccc tgtaatttgt gtattataac ccgaattatc ttgctaggag
    21001 aaatcacaat ggctgatgca gaatttatgg atttcctgtt agatcaacta agcccgattt
    21061 ccggtttgcg ttcgaaaaaa atgtttggtg aatattgctt gttttttgat aataaaattg
    21121 tcgctattat cagcaaagat tatcgcattt ttgtcaaagc taatccgcaa accttgccgt
    21181 tattcttagc tgaaaatgcc gaacaatttc actattttgc taaaggaaaa gtgcaaaaaa
    21241 tgcactactg gagcattccg gaattagcga ttgaagaagc cgatgaactg gtcaaatgga
    21301 ttcggctagg cttacaagcg gtgtaattta gcgaaaattt tgtaaaaaaa cgctaaaata
    21361 tgcccgcttg ttaggggggg ggacctaata tttctatact ttaagatttt atatttatga
    21421 accaaaaaaa attagtttct ttgattgtcg ttattgtgtt ggcaatcatt tctcaaattt
    21481 ttagcttttt tgataaaaaa gagccttcaa aagcacaaga aaaatcgacc cagagtagtc
    21541 agtctcatca agtttcaact tcatcactag ggaactatga tgtgcagatg aaaaacgacc
    21601 gtttgaaaca gcatattgta gataccgatt attacacctt agcgttgtcg tggtcgccgg
    21661 cgttttgcca aaaacaaaag cgaaataatc acggtaaaat tccgtctcat ttggaatatc
    21721 aatgtggtgg ctcagcggat tttggttggg ttattcacgg cttatggccg caaagtggca
    21781 aggcaagaag tgttgatgaa caccctcgtt attgccaagg cgatttgccg atggtggcag
    21841 agcagacgat taagcaatat ttacctgaat cgccgggggc aactttgttg caaggcgaat
    21901 gggaaaaaca cggtgcttgt gcctttaacc aagcggatga ttacttcgcc aaacaaaaag
    21961 agctatttaa tcagctcaaa ttaccggata ccgaaatgtc taaattagca ctgtttaact
    22021 ggatgcgagc caataaccct catttgcaaa atgtctattt agggggtagc aaagatgagc
    22081 tgtatatttg ctatgataaa gcatttcaac caatggattg cccacgctaa tggcagatct
    22141 tcgccaactg aaaatgcagg ttcagcgcca attaaagcgt gatcttgaac gtgcaaatca
    22201 ctattttaat accactttta cgccaccaag tattagctat gcggtgcgtg gcgtaaaagc
    22261 cggtgtggct tatcttgaac gcaacgaagt acggtttaat cctgtgttat tgcaagaaaa
    22321 tgaacaggca tttatccgcc aagttgtgcc gcacgaactg gctcatatct tggtttatca
    22381 acattttggg cgggtacaat ctcatggtaa agagtggaaa atgatgatgg aaaccgtact
    22441 gggtgtgccg gcggaaattt accattgttt tgatacccaa agtgtgcaac agcaatttag
    22501 ttaccaatgt gcctgccaga ctcaccagct ttcgattcgc cgacacaatg ccgtgatgcg
    22561 agataaaaaa agctatattt gccgtttatg taaaactcaa ctccattttg tagaaaaaag
    22621 ttaatgtgga gaaaagttaa gagaatgtta cgatttagct agacattcct gtttaaacgc
    22681 ctacaatttg ccgtagtttt tatttttaat tttatttccg gagtatttat ggaaacaatt
    22741 gtaattgtag gtggcggtgc aggcggtttg gagcttgcaa cctatctagg caacaaatta
    22801 gggcgtaaac aaaaggcaaa agtggtgctg attgaccgca atgcaacgca tttatggaaa
    22861 ccactgttgc acgaggtggc aaccggtact attgatgagg gaactgatgc gttaagctat
    22921 cgggctcacg ctaaaaatca tagttttgaa tttcagcaag gtacgctggt ggcggtagat
    22981 agagagaaga aaacggtttc actcgccccg atttataatg atcaaaacca acttctcgtt
    23041 aaagaacgcc atatcagtta tgacaaatta gtgatcgcga tcggcagtaa atccaatgat
    23101 tttggcacca aaggggttgc agaaaattgc attttcttag atggctcaga gcaagcaaaa
    23161 gatttccaaa aacgaatgat ggagctgttt ttacgttttt cacatagtga aaataaagat
    23221 gtaaaaattg cgattgtggg ggggggagca acaggtattg agctttcagc ggagctttac
    23281 cacgtggtga aaaatttaaa ttcttacggc tttggtaaat taaaccgtgc cagcttgaaa
    23341 gtcactttaa ttgaggcagg ccctcgtttg attccggcat taccggagaa agtgtcggtt
    23401 tctgctttcc acgaattgaa aaaagcgggt gtttcggtgc gtttaggtac gatgattacc
    23461 gaagctcgtc cagatgggct aatgacccgt ttaggtgaga aaattgaggc ggatattatg
    23521 gtttgggcgg ctggcgtgaa agcccctgaa attacccgtg aatttggttt tgaaactaac
    23581 cgcttgaacc aaattgagat taaagacacg ctacaaacca ccgttgatga gtcagtgttt
    23641 gtcattggcg attgtgcatc attaattcaa gatggcaagc caattccacc cagagcacaa
    23701 gcagcccacc aaatggcaac ccgatgtggt aaaaatattg tggcattgat agaaggaaaa
    23761 gagatgaagc cgtttcgatt taacgataaa ggctcactgc tttccttctc aaaattcggc
    23821 acggtgggta atttaatggg gaatttagtg agcggtgata tgtttattga aggtaaaatt
    23881 gcccgcttgg cttacctctc gctttatcga atgcaccaag tggcattaca cggctgtgtc
    23941 aaaaccggct tgattgtgtt ggtagggcaa attaaccgtt tcttaagacc aacaatgaaa
    24001 ctacattaaa caaaaatccg catcaaatga tgcggatttt ttatggcaaa ataacaagcg
    24061 gttattttct tgcctatttt tgcaaatact cacgcctagt ttgctaattt aatttccgcc
    24121 aaccatttat caattaagcg tttgccctct tcgctggaac ctgctttttg gtaatcaatt
    24181 tccacaaagt ctaacgcttc ggctttggtt gattgtggag caacttcggc gttgatgttt
    24241 gttggggttt ggtaaacacc gtgttttttc caaggaattt cctgtgcttc ttttgaaagc
    24301 acccaatcca taaagagttt ggcgttatct aaattacggg catttttgat aatgctgaca
    24361 ccgcctaacg catagcccac tttaccttcc ggaataatgg cttcaatagg cgcacctttt
    24421 tctttttcag tggcataact atgtacaaag cctaccgtaa ccgcactttc accacgagca
    24481 agattgctgg tgactagggt gcttttcaca tattgcgaaa cgttattgtt gagttttttc
    24541 agataatcaa aggttttctc ttcgccccat aaggttgaaa gagtggtcat aaacgtataa
    24601 gtcgtgccgg agctacgagg atcaggcagt tgtacttcac cttttaagcg aggatctgat
    24661 aaatcttccc attttttcgg tgcctcaatg cctagtttgg cgagtttttc ggtattcacg
    24721 cctaacccta atacaagcat ataaacgata gaggtaaatt taccttgttc actttcaact
    24781 aaggatttaa attgtggcag aatttcagct tgttttggtg aacggtaggc ttccagtaag
    24841 cctaattcgc ctgcttgaaa gtgaggttca atcgtgccgc cataccaaat atctgcctga
    24901 gggttcgatg cttccgcttt tacttttccg aaaattgtac cggttccgcc gtgaatgaat
    24961 ttagtttcga cattatattt gtgtgaaaat tgcttggtca tttcttcaca aacattattt
    25021 tgtaccgagc aataaacagt taaacgacct tctgcttgtg ctgcttgagc tgataagaaa
    25081 atgccagagg cgattaagat cgattttaat gagattaatt tgagtacgtt catcactttc
    25141 ctgaaaacat aaaataaaag gtagtgaagt ctagcatttc aaagcgctgg ttgaaaatag
    25201 ttaattgcaa tgaagtaggg caattgtgcc tattacttta atatttacca actatttgca
    25261 agttttagca aaaaataacc gcttgtagta gctcttgcta ttttgtcaaa attcagaata
    25321 ataaatgcct ttagtctaat gttaaatttt agttatggaa aatagttgga aatatgcttt
    25381 taaattaatc acgccgattt ttatgggcta ttttgcggca ggggttgctt acggaatgct
    25441 tgccaccaat gccggaatgc ctgcgtggtt tacgattgta atgagtttta ccgtggtatc
    25501 ggggacggca caatatgcag cgattccatt ttttgtctcc ggtgttgggg cggtgtcggt
    25561 ctttctcagt acgcttttaa tgagtctacg ttttagtttt tacaccttaa atatgatgga
    25621 gcataagccg atatccaaag cgaaaagtct ggtcgctatt gcaggtttaa ctgatgaagg
    25681 ctttgcggtg ttatcttcat taccgaaaga gcaaaagcaa gcattattct ttaaaatcgc
    25741 tgtgctatgt gtggcttatt ggacattttc cacgattgtc ggtgtgttgt taggcgattc
    25801 agtggcgaac tatattccgc atttggattt tgctctgcct tgtttgtttg caattttagc
    25861 ctatgagcaa tacaaaaacc aaaaacaatg gaaaccgatt gtgattgcgt taatcggatt
    25921 tttacttgct cgtcagatta ccgaaaccag cgtgttattg gtggcaattt tagtagcgat
    25981 tgtcattgtg gctttattac ctcaatcttc ttcaatcaaa ctagagaaag gagtagaaaa
    26041 tgagcacaaa tgatactttg ataatgtttg cagcattagt gctcggctcg caaatttgtc
    26101 gttttttgcc ggaattttta ccgaaaaagg tgttatcttc gcccattttg caaaaattaa
    26161 acaaaatgtt accgcttgtg attatgcttt tattgctttt aacgagccta aactttccta
    26221 aaaacgggga aggctttaac ttaatattgg cacaaattct ggctttaata ggcgtattag
    26281 gtagctatgt ttggcttaaa aatacctttt taagcgtagc gttggggatt ttcggtgtga
    26341 atgtattttt atccctgtta ggataaatac caaaggtcat tttataggag cgaaacacct
    26401 tcgctcaatc attaacagat gtggggcgaa aaatttttcg ccccttattt atcacaagcg
    26461 gtctttttct ttcaattttt tgcaaattaa atcgctaaat caaacgcata gaaggcaact
    26521 aaaataatcg caataattac tgtacctagg tttaatttat tggcttcgcc tgaaattaag
    26581 cgaccaatca caagggtggc gaaacctagc ataatgcctg tcacaatgtt ggcggttaat
    26641 acgatgaaca ccgcacagac taaacctgac attgcaccta caaaatcgct gaaatctaat
    26701 ttagagacat tacttagcat taataagccc acatacatta atgccggtgc ggtggcatag
    26761 cttggtacta agaatgcaag aggttggaag aacagcataa ataagaaacc gataccaacc
    26821 actacagcgg ttaaacctgt tttaccgcca acggctgtac ctgctgccga ttcaatatac
    26881 actgccgctg gtgctgtacc aaataagccc gataaaattg atccgaatga gtcagaagtt
    26941 agggctttat cgccattgat aatttgtccg tctttatcta ataaaccggc ttgccctgca
    27001 accgcacgga tagtacctgt tgcatcaaaa atagcggtca ttactaacgc aaacactacc
    27061 ggtaaaatgg cggtatttaa tgctcccata atatcaagat ttaggaattg cgaattttca
    27121 ccaaaactcg gcattttgaa aaagcctgtg tattttacgt tagggtcaaa aattaaacct
    27181 acgatggtaa tagcaataat gacccataaa atactgcctt ttactttcag cttttctaac
    27241 ccgataatgg cggctagacc gattaatgac actaaaaccg gaaatgaagt gaagtcccct
    27301 aatttaaccg gaatatccat accgctattg accactaatt taacgttagt ggcggcaata
    27361 atcagtaaga ataaaccaat accaattcca gcaccgtggg caatgctgct tggcaaatta
    27421 cgtaaaatcc aagtacgaat accggtagca gaaatcaagg taaatactac gcccattaag
    27481 aaaatcgccc cgagtgcaac aggaatagaa acttgttgcc ctaatactaa gctaaaggca
    27541 gtaaaagcag taagtgaaat cgcacaaccg attgccattg gggcatttgc ccataaaccg
    27601 attaagatag agccgagacc tgaaactaaa caggtggcaa taaataccga ttcggcagga
    27661 aagcctgctt ggcttagcat tcccggcaca acgatgacgg aataaaccat ggctaaaaag
    27721 gtagttaaac cggcgatgat ttcttgacga gcgtttgaac cacgctcctc aaatttaaat
    27781 aacgacataa gaacctcaaa agaagaaaat gaaaggggaa attttaggat gcggaatttt
    27841 acagaaattt aaaataatta gcaaacgttt gcgtaaaaag tgaaagaaaa gcaggaataa
    27901 atcctgcttt tgtttgatgg ttagtaatcg atgaaagcgt cttgatctgc cccttccttt
    27961 tcaactttag gctgaaccat atgttcacgt tttagcccaa gttgtagtgc cacaccaatt
    28021 gcaatgtaga tggatgaata agtaccgaaa ccgataccga tcaataatgc aagtgagaaa
    28081 ctatgaagcg ttggaccacc tagatagaat aaggctagta ccacaaagag ggtggttact
    28141 gatgtcatta aagtacgcga aagtgtttgg ctcaaggaaa tatcgataat ttcaattgag
    28201 ctggagcgac gaactttaga aaagttttca cgtacacggt caaacaccac aattgagtca
    28261 tttaacgagt aaccgacaac agataaaatc gctgctacaa aggtcaagtc aatttcaatc
    28321 tgtaagaaag agaagattcc gatcgtcact aatacatcgt gaaataaagc cacaataccg
    28381 cctaccgcta aacgccactc aaaacgtgtt cccacgtaaa taagtagcat agcaagtgtt
    28441 gccaaagtgg cataaatagc cccttgggtt agctcttccc ccacgtttgg gccaacgaat
    28501 tcaatgctct tgatagtcgc attcggatct aatttttgat ggatcatctc catcacttta
    28561 ttcccaacag acatatcacc ggcactggcg gcaagtcgga tcattaaatc tttttgactg
    28621 cctgtggttt gcactaaggc attgccgtag ccgctatttt caagctccgt acgcagtttt
    28681 gctaaatcag caggttgtga aaattgagtt tcgattactg tcccgccggt aaaatctaac
    28741 ccccagttaa agccttttgt cgcaatagta aaaatgcata aagcagttac aatcagcgaa
    28801 aaaatgaatc cgacatagcg gtatttcata aaggggatta atttataagg cagtttaatt
    28861 tctgctacat cttgttgtac attttcaata gccatttttc caccttaaat ccaaagtttc
    28921 ttcacgcgtt tgccaccgta aacccagttt acaagcattc gagtacctgt aattgcggta
    28981 aacatagaaa taattacccc taatgcaagc gttaccgcaa agccttttac cggacctgta
    29041 cctacaccat aaagcacaag agaagtcaaa atagtggtga ggttggagtc aaaaatactt
    29101 gagaatgcgc cattataacc ttcgtggatt gcttgttgaa ttgggcgacc gttacgaatc
    29161 tcttctttga tccgctcgta gattagtacg ttggcatcaa ctgacatacc cacagcaagt
    29221 acgataccgg caattcccgg catagtaagg gttgcaccga ttaatgacat taaaccaatc
    29281 gttaagatca tattcacaat caaggcaaga gaggcaaata taccaaatac tttataaaag
    29341 gctagacaga acaggatcgt taagcctaag cctaaaatac tagcttccat accttgttta
    29401 acattatctg ccccaagaga agcaccgata gtacgctctt ccacaatcac gattggagca
    29461 atcaacgcac ctgaacgtaa taataccgca aggttttgag cttccgctgg tgaattaatc
    29521 cctgtaatct ggaattgatt acctaaacgg gtttgaatgg ttgcaacgtt aattacctct
    29581 tggtgttttt ctaaaatgac tttaccgtta gcatctttac gacctgaatc tttaaattcg
    29641 gtataaagtg ttgccatcgg tttttggatt gccattttag taatttcacc catcatctcg
    29701 ccgccttcgg tatcgagtcg gatactcact tgcggcaagc cacgctcatc agtgcctgag
    29761 gttgcatcaa taatatgttc accccctaac gaaggtttac ggcgtaatac aactggctcg
    29821 ccatcacggg tgttttgcag tcctgaatca gccggcacaa tgcctttcgc cgcagaggcc
    29881 acattggctt cggtattgac taaccggaac tcaagggttg cagttgcccc taaaagctct
    29941 ttggcacgag cggtatcttg cacacccggt aattcaacta cgatacgatc tgcaccttga
    30001 cgctgaatgg tcggctcaga aacgcccaat tcctcaacac gtttacgcaa aatagaaagg
    30061 ttttgttcga ttgccatcgt gcgagattca gaaagagctt gtgctgatgg cgttaaggtg
    30121 actttattat catttaccaa aatatcaagc gttgggtgag agagacgcac taaacgcact
    30181 gctttttcgg cggtatcgtt atcggcaaat tcaacctcag ttgcaaaatt ttcgcctttt
    30241 ttgaccgctt gatattgcaa tttttcttta cggaaatcac tacgcaggct gtcttgcaaa
    30301 gtgtcttgtt gttttgcaag cgccgtgttc atatccactt ccattaagaa acgaacaccg
    30361 ccaagcaagt ccaagcctcg cttcatcggg ctaccgccaa tgtcagacaa ccactgtggc
    30421 gttgctggtg caaggtttaa ggcaacagag tagttattcc ccaatgcttc tgagattttt
    30481 tctttggcag gcaattgctg ttcgctgctt tcgagacgaa ccaaaatcga gccattttct
    30541 aacacggcag atttcggctg aatattcatt gctgaaagtg tggattgcac ttgagacagt
    30601 gtctcaggtg tggcttgttg cccacgagta ccggaaattt gtaccgaagg atcatcgcca
    30661 tataaatttg gaagggcata taaagcacca atggcgatca cgaagatcac cattaaattc
    30721 ttccatagag ggaaacggtt taacacaata actccccgaa tgttaaagtt ggataagagg
    30781 gttgattaaa gtgattttaa tgaacctttt ggtaacaccg caacaacgaa atcacgtttg
    30841 atggtcactt cagttgtgtc atttaatgca atcacgatgt tatcgttatc agcggtcact
    30901 ttggtaattt taccgattaa accaccgctg gttaatactt catcgccttt tgtcaagctt
    30961 gccagtaaat cacgttgttg tttttggcgt tttgcctgag gacgataaat cataaaatag
    31021 aaaattgcac cgaaaataat caggataaag atcatttcca ttccgccacc ttgttgcata
    31081 aaaactcctt aaatgtttga gtggtataaa aataagtgtt ataaaaaacg cctgttaaaa
    31141 taccataaat tcaatgaatt aacgagtaga aaaattcatc gaatgctttt cttttaaaca
    31201 aaaatttgag tagaatcagc acttttagtt taggattagg ttcttggcgt gttcttgcgc
    31261 tgacacaata ggagaaaaaa tgaaaaaatt attcgctcaa gcggttattt ttggggcttt
    31321 ttttgcaagt tccgcttttg ctcacaatgt gcaattaaat caagcattac ctgctgtttc
    31381 ggttgcaaaa gacggggaat tggcagtggc aggtggaaag gttagctata aaaattggca
    31441 ttcatcatct ctggcaggta aagtccgtgt tattcatcat tttgccggta gaagttcggt
    31501 gaaagaaaaa aatgaagatt tgatgacagc aattaaaaat gccggttttg atcgctcgaa
    31561 ataccaaacg gtgacgattg taaatgctga tgatgcgatt gtcggcacag gggtatttgt
    31621 gaaaaatagt gtggaaaacg gcaaacttga caatcctcac agccaagtag tgttagacca
    31681 gcaaggcagt gtgaaaaaag cgtggggctt aaaagagaaa gagagcttta ttgcagtgct
    31741 ggataaatcg ggtaaggtac aatttacctc tgagggcaaa ctctctgcaa aacagattca
    31801 agaagtgatt gggttggtga aaacattaac gcaataacca gtgtttttat gggcggattt
    31861 tgtatccgcc catcattcta gataataaat cgataactta tcgtgtgatg atactcttct
    31921 cctgcttttg ttatcccgcc aaattggagt aattcaggct ggtttagtga atttgggaaa
    31981 aactcaggct ctaatgctac accagcgtaa tcttcatatt cgcctttagt caaattaggt
    32041 tgtcctttta gccagttgcc ggtgtaaagt tgtaatgctg gcatggaggt gcggagttcc
    32101 atttttaagt cttccacggc taaacaagcg gtcggatttt cactattttt tgcaagatga
    32161 aaggagtgat cgtaaccttt taccgctttt tggtcgtcat cagccaataa atcttgccca
    32221 atttttttag cattgcggaa gtcaaaactg gtactctcca cttttttcag tggagcatta
    32281 ggaataccgc tggcatcaac cggtaagtat ccgtctgcat taattatcag ctcgtgatct
    32341 aaaatcgtct ctgaaccttg caaattaaaa taggcgtgat tagttaagca aagcggtgta
    32401 tcttggttag caacggcatc aaagctgatt tgaagctcat tctctgttaa gcgatactcc
    32461 acaaaagctt tcacttcgcc gccaaatcct tcctcgccat ctgcaaaaaa ataactaaat
    32521 ttgaccgctt gttcgctttg gctttcaagt tgccacacta ttttatctgc cccaagctcg
    32581 ccaccgtgga gattatgttc accgttattt ttagcgagct ggtaggtttt gccgtttaag
    32641 cgatattcgg cattggcaat gcggttagcg taacgcccaa tggtcgctcc aaagaaagcg
    32701 gtctgttttt gccaattttt tgcagacgtg gtgactaata cttcccgttc ctcgttcggc
    32761 attttgacaa tgcacgaaag ccaagaagcc ccaacatcag aaagggtaat gcgtaaaaac
    32821 gcattttcaa gggtgaataa tttcatcggt tgaccttaat tacctagcac ggcatagccg
    32881 tactaggtta agcataattc agccctgcta gggctgaggt tatttatttt agagtagcgg
    32941 agctacttcc ttatgcttaa cccggtacgc tttagcgtgc cgggcattct cgcaccccat
    33001 cggaggcagt acaaacgtgg aaggtttctt taatgccggt ttgcttttcg taattgttag
    33061 caacggcttg gcggagatct tccactttgt catttggcac taggcacacg acacaaccgc
    33121 caaagccgcc gccagtcatt ctggctccgc cgtttttacc gatagcttgt tgggcgattt
    33181 cggctaagca atccacttca gggcaggtga tttcaaaatc atcacgcatt gagtcgtgag
    33241 attgagccat caactccccg agtttgacca tatcattcgc ttttaaggcc tctactgctt
    33301 ccagaactcg ttgattttcg ctgatgatat gttttgctcg tttatacgcc agctcattct
    33361 cttcactaag ttctgaggct cgttcaataa attgttccgc tgtgacatca cgcaattttg
    33421 ctttgccgaa gaagtgggcg gcaaattcgc actgttcacg gcgactgttg tattcgccgg
    33481 taaccaagtc gtgttttacg ttggagttaa taatcgcaat cgaatagcct tgtggcacag
    33541 gggttggggt gatttctaaa ctacggcagt cgatcatcac taaatgatct tgttgcccga
    33601 gagcggaggt gagctgatcc atattgccgc agttgcagcc gacaaattta ttctcagcct
    33661 cttgcccgat taatgcgatt tgcggtaaag aaagcggtaa atcgccgagt aattgagcgg
    33721 ttttaccaat cgacacttcc aatgcggcgg aagaacttaa acctgatgac atcggcacat
    33781 cgctggtaat ggctaaatct gctccttgtt tgaattcggg gtgtttggct tgaataaatt
    33841 tcaccacgcc acgcacataa ttcgcccatt tttgctcgct tggctcaatc gcctggctta
    33901 aatcaaattc atcttgttgg ttgagatcaa tggcgaacac ccgccatttg ttgtcactac
    33961 gtttggcaaa gctaaccgct gtgccgtaat tgatggcaca aggcattaca aacccatcgt
    34021 tgtaatcagt atgttcgccg ataatattca ctctgcccgg ggcaaatacc gtgcgttctg
    34081 ctttataacc aaaatgttgt tcaaattgtt gcaaagcgat ttcttgtggt ttcatttcaa
    34141 ttccttattt atctttatag tgtttggtat cacttactgc atttaaacgt tcggcagctt
    34201 gttccggggt taaatcacgt tggctttctg ccatcatttc ataaccgacc ataaatttac
    34261 gcactgttgc cgaacgcaag agcggcggat agaagtgagc gtgtaattgc cagtgagcat
    34321 tttccttgcc gttaaacgga gcgaagtgaa agcccattga ataaggaaag ctgatgttaa
    34381 acagattgtc gtaacgggtg gtgagctttt tcaatgcaag ggctaaatcc gctttttccg
    34441 cttcgtttaa atcggtaatg gatttgaact gcttggcttt cggcaacagc aaggtttcaa
    34501 acggccaagc cgcccagtaa ggcacaaccg caatccaatc ttcggtttct gccacaattc
    34561 gctcttgttt gtctaattca cgttgtgcgt agtcaagcaa cagtggcgag ccatattgag
    34621 caaaatattt cgcttggcat tcgtcttcaa tcgcaatttc attaggtaga aaattacttg
    34681 cccaaatttg cccgtgtggg tgagggttag aacaccccat cattgagcct ttgttctcaa
    34741 aaatttgcac ccactgataa tgctctttca gctcattcgc ttgctcttgc caaactgtta
    34801 ccacatcagt aatttcctcg atggaaagtt gcggtaaggt tttactatga tcaggcgaaa
    34861 aacagatcac acggctttcg ccttgtgtat gagaaatctg aaacagcgga tcatcattcg
    34921 gtattggtgc cggtgtgtct ggtagcaggg cagagaagtc gtttttaaac acaaacggct
    34981 tggtgtaatt cgggttttgt tcgccggtaa tccgcttatt gccggggcag aggtaacaac
    35041 ttgggtcgta gctcggtttt tcatcttgca cgatttcttc ttgttgccct tgccacgggc
    35101 gttttgcccg atgcggagag actaaaatcc attgattttt taatggatta aaacgacgat
    35161 gtgggtgatc gttgaggaca aattcgctca tataaaactc ctcgaaatta gttatgtaaa
    35221 gagtatagcg aaagtcagac aaaatgactg tgacatagct cacaaaataa tgatgtcaag
    35281 cggtcaaatt tcagaaaaat tttgcaagtt ttcctccatt ttgcgattta aggtagctta
    35341 cgtggaattg aatgtggctt ttggtagaat agatgaatat gcaagatatt aagacaaaaa
    35401 tagatggaaa gactgaataa atttgatgct tggttaatga atcataaacc taatgctagg
    35461 ttaagcggag cgagtcgttt gttgacagag ttttggttct ttgggttaaa agaagctaga
    35521 gcctgtttat ttgcgggatt attttttatt gcgatgtttt cggtaccaaa aacgggatta
    35581 tggggcttac ctcgttatga tattttgctg atttttgcca tagtggtgca aattgcaatg
    35641 gtgaaactgg ggctggaaac gtgggacgag ctaaaagcaa taagcctatt tcatttggtt
    35701 ggttttgtgt tagaagtctt taaaacatcg agtaatattc aatcttgggc atatccggat
    35761 tttgcctata ctaaattgtt caatgtgcca ttatttactg gttttatgta tgcagcagtt
    35821 ggttcttaca ttatccaagc gtggcggttg tttgatttga aaattaaaag ccacctgccc
    35881 tattggttag ccactttaac ggcactgatg atttacctga atttctttac gcatcattac
    35941 attggggatt accgttggta tattgccgct tttgcattag ggctgtatgc acgtactttt
    36001 gtatttttca ccccttatga cattacacga aaaatgccac tgctgctttc tttcttcctg
    36061 ataggttttt tcatttggtt ggcggaaaat atcggtacgt ttgccggaat ttggcgctac
    36121 ccgaatcagt ttggggcttg gtctatggtg catatgagca agtggagtgc ttgggcgtta
    36181 ttggtgatga tgacttttac catcattgtg catttaaagc atatcaagca aacagtcaga
    36241 gtctcgagcg attaacaagc tgtgggtttt ggcgaaaatt ttactcatca gttattttca
    36301 gtggaattag gggcaaataa taatttgccc ctatatcaaa ttatggattt tccccttcca
    36361 catcaataat catcacttcc gactgtgagc ctaaccgcat cggcacgccc cagaatccgt
    36421 agccggaggt gacaaaataa tgcccgaagc cgattttttc atagccgtaa tgtaatcgat
    36481 agatcagttt ggtaataata cttgcaggga acacttgccc tttgtgagcg tgtcctgaaa
    36541 cttgaatatc aatcggcaat ttagcatgtt gctcaatttc agtcgggcgg tggtcaagca
    36601 aaattaccgg tagtttagtg ttcacgtttt gtaaaagctg ttcggcagaa ggtcgatttt
    36661 tgactaaatc atcattacgc ccaataaggg taaattttcc gttaatttcg gccgtttgat
    36721 cccataaaac agtaataccg gcgtcggtaa tttcttttgc aatcgtttct tgagccccaa
    36781 aaaagtcgtg attgccaagg gtagcataca cgccaagagg agcttttaat ttggctaaat
    36841 gaggctgcat tttatcggca acataaactt cggtattgtc gtccataata tcgcccggca
    36901 ataaaatcag atcgactttt tgctggttga aaatctctgc cagttggtca agttgcttgg
    36961 ttccgaacag ttttcctaaa tgcagatcgc ttgccatacc aatgcgaagc ggtttctcta
    37021 atggtttatc caatttcacc gaataatgta ctactgttgg ggtataagcg ttgtaatagc
    37081 caagcccaag taagccaaag aatgcaaatg ggtaggcgat tttcagccag cgattgacgg
    37141 tagtattgcc gttgaatatt ttgtaaatac aagcggtgaa aaaactgata aaaaatgcaa
    37201 aaagtaacaa taccaatatg aatgccatta ttctaaatag cgcaaaagta cgagtaagat
    37261 gcaaaatcac taatccgttt gcgactaaga aagtgagaat accaactgtt ttacggtttt
    37321 tacttgataa attaaataac cagctgacag tctttgcaaa gttgaataaa aagagttgta
    37381 acaccgcaat cacaagggcg gtggtaatgt agtaacgata ttccatattt ttccttcaat
    37441 aaattggcta aacccagccg atttgtctta ataaaaataa gccgatgctg gcactaaaca
    37501 ttgagccgag agtcgtaatg ccgatcagat ttgcggctgc ctcgccgtct ccgccatagt
    37561 tgcgtgtcat tgcgtaggtg gctgaagcaa cgggagcaga agcagccaca aagacaatgc
    37621 ctagttccat cggcggaagt tgaaacacaa atttcccgag tagtagcaag aaaattggag
    37681 caaaaatcag ccgaatcgag gcagaaaaca gcacaatttt attgatggtg ctttccactc
    37741 cttgattaaa ttgtttcaac tgtttgaaat taatgcttgc tccggtgcag ataagtgcta
    37801 atggtagtgt caggctcgcc attaatttac cagcagactc aagcggggtt ggaatttggt
    37861 ggcttaattc aaaatagtta aaagttaagc ctgcaatgac ggctagaatc agcggatttc
    37921 tcaatatcga caatattaat ctgccaaaat tcactttttt ctcgcttaac gatgaagtga
    37981 gggtaatcac tgcaagcaca ttaaaggtaa tcaccaagca cgaaatataa actgaagcgg
    38041 cagcgagagc tttatcgcca taagcattga gaattaaggc aatgcctaaa atcgccgcat
    38101 tggtacggaa agtgccttga gtgaaaatac aacgataacg gcggttttca atatgtcgag
    38161 ccgcccacca ttccgcccat aaatagatca aaatcgaacc gccgactccg gtcgagatca
    38221 ggttgatttg gctggagaaa tctaacgggc tttttagcat attcaagaaa atcatcggtg
    38281 gcagggtaaa attaaatacc acctttgatg ccatattgca aaaggtatcg tcaataaatt
    38341 ttcgtctgcg tggaaaaata ccgaacagca ttaacaaaat ggttggtaag gtaacgccaa
    38401 tgctaaattg gatagagtcg aaaagcataa tgtttgcctt aaatgatggc acgagtgtct
    38461 tttgcttgta ccgtagatta tcaataaagt accagcgtgg acgctggtac tatcatcaat
    38521 ggaaatgaaa ttacaatcct gcctttaagc ttgcttcgac aaatttatcc aaatcaccgt
    38581 ccagcacttg ttgggtggtg cgatgttcca caccggtacg gtggtcttta atccgtgaat
    38641 cgtctagcac ataagagcgg atctggctgc cccagccgat gtcggatttg ttgtcttcca
    38701 tcgcctgttt ttccgcattt ttcttgctca tttccagctc atatagcttc gctttaagct
    38761 gtttcatcgc ctgatcttta ttttgatgtt gtgaacgacc gttctggcac tgcaccacaa
    38821 tgccgctcgg tatatgggta attcgcaccg ccgattcggt tttattgacg tgctgaccac
    38881 ccgcccctga ggcacgatac acatcaatcc gcaaatccgc agggttgatt tcaatatcaa
    38941 tatcgtcatc gacttccgga taaacgaaag ccgccgagaa cgaggtatga cgaccgttat
    39001 tggcatcaaa cgggctttta cgcaccaagc ggtgaatacc cgtttcggtt ctgaaccagc
    39061 cgtaagcata gtcgccggaa attttcacgg tggcggattt aatccctgcc acatcaccgt
    39121 ctgaggcttc cattagttcg gctttaaacc ctttgctctc tgcccaacgc aaatacatac
    39181 gcagtaacat ttctgtccag tcctgagctt ccgttccacc cgaaccggct tgcaaatcca
    39241 aatagcaatc ggcactgtcg tgtgggccgc tgaacatccg cttaaattct aaatcggcaa
    39301 gttttttctc taattcgtct gcttccactt gggcttcatt gaaggtatcc tgatcttctg
    39361 cttccaccgc cagctcaatc aacccttcaa catcttcaat cccttgctct aaggctttaa
    39421 tcgtattgac gatctgctcc aacattgccc gctctttacc aagcgcttgt gctttttccg
    39481 gcttgttcca tacatcgggt tgttccagct cggcattgac ctcttctaag cgttcgactt
    39541 tatgctcaaa gtcaaagata ccccctgatc accgcggtgc gctcgcttaa atcagttagt
    39601 tggtttttaa ttgggtttaa ttcaaacatt gtcgttcctg tttttgctta ttttaaaaag
    39661 atgaattata gctgaagtta agcaagcggt cgaattttgc aagaaatgga gcaatgatcg
    39721 tttctagtaa tgagatttgg ttcataaaag ttgcaactgt ttctgctatt tggctttgat
    39781 agctaaaaat ctttaaaaaa acaagcggtc gttttacccc attttttgca aaacgaccgt
    39841 agcttcttgc tataatcgct gaaaaaatgc tgcaaggaga ttttatggca aagcgcccaa
    39901 gtgatattga tgcaacccta ttgcaactgg aaatcctacg ccgtatcccc aaattacccg
    39961 ctaaaattga tgctaaaagt ttgcaccaac agctattaga tgccggcttt gaacgggata
    40021 ttcgcactgt tcagcgttcg ctcaaaatgt tatgcgagca ttttgatatt gaatgcgatg
    40081 agcggagcaa accctttggt tatagctgga aaatccgctc agaggggctg gcattgccga
    40141 ttctcaacga acaacaatca ttactgctaa aacttgccga gcaacagctg aaatatctgt
    40201 tacccgcaaa tttaatggca tcaatgaaac ccttttttga gcaggcagac agaatggttt
    40261 ccggggcgaa agacaagccc gaataccaat ggctaaataa agtttgctcc acgccaacca
    40321 gcctaccgct gatccctgca aaaattaaag aagagatttt taattccgta agccaagcct
    40381 tatttcaaaa taagttgtta aagatcgaat atcagaacca gcacggcaaa aaacaccaag
    40441 cgacaattat gccgttggcg atttcacaac aaggtgcgag catttatttg gtctgccgtt
    40501 acgaagggtt tgacgacaac cgcctgttgg ctcttcaccg cattcgtaaa gcggagattt
    40561 ctacttttag ttttgaacgc ccgaaagatt ttaatttgca agcctaccaa gatgccggac
    40621 acctcggttt tggcaatggc gaaaaagcta gccttacctt ttcgattagc agagacgccg
    40681 gtttccattt aaccgaaaca ccgcttgcca aagatcaaaa aattctcgag gagagtgaaa
    40741 ctcactaccg tattcaagcc atagtcgctg ataatgatat gctaacctgg tagctacgca
    40801 aatttggcga agatatttgg gatatcgaga aagaagcgct aaaataagct aaacaagcgg
    40861 tcggttttgt gggaattttt gctaaatagt atcgaccgct cctccctaaa cagaccttta
    40921 tcataaatac aactctttca atcagatatt cttactgtct attgatgaac gattcgaatt
    40981 tttctagtgg ttgaaattta aactaatttt cttgcttttt ggcatttttc agacttttaa
    41041 ttctctccat tagcctgttt ttttacgctc tttttcataa acaggaataa ccaatgcctt
    41101 ttcaacttac tttctgccaa caagccggca atcagcacca gaaaaatcaa gatgcactgt
    41161 ttaacggcaa agcggtgtac caatggcaac ttaaaaatgc cgagagttat ctgctggata
    41221 acgacaaagt aatttttggg gttgcggacg gcgtttccag ccaccctcga aatcatcttg
    41281 cctcacatta tttaatggcg ttactcagcc aatgccaatc ccttgatagc caatggttgc
    41341 gacaggctca cggcgatttt tgcgaaaaat tagcgaaaga ttattttggt gcttcttgca
    41401 cttttgttgc ttgtgaatta caccataacg gcagagggcg tatggttaat gtgggcgaca
    41461 gtcgagccta taaaattacg gcaaacgggg agtggcaaca actgagtttt gatcacacca
    41521 tactggctga aatgaaacag aaaggcttgg ttaaggaagg gagcaactat gcctcaatgt
    41581 ataacggctt aaccgattgt attgttgccg attttgacgc cgatgatttc cgcattcata
    41641 tagccgaatt tcaactggaa aaaggcgaga gcattttgct ctgttctgac ggtttgcacg
    41701 aacaactcgc cccagaagct attcaggcga tttaggacgg atacgaaagc ccgtctcatc
    41761 gtctgcaaat ttgcagaaaa atggtaaaaa tgcaccgctt gtatgacgat ttttctgcgg
    41821 tgatttgtga aattgtgtaa ttaaaacgac attatttgtc gcattggtgc ttaaaatccg
    41881 cataaaacag aggagaaaaa aatgaaaaac gatttccatt atgccgctga attaatccgc
    41941 aatgcagacg gcattttaat taccgcaggg gctggaatgt cggtggacag tggcttgccc
    42001 gatttccgta gcgtgggagg gttatggaat tcctacccac cgctcaaaaa atttaatttg
    42061 caatttatgc agattgccac accgcttgcc tatcaggaac gccctga
//
LOCUS       DANLZQ010000010        42055 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.010, whole genome shotgun sequence.
ACCESSION   DANLZQ010000010 DANLZQ010000000
VERSION     DANLZQ010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 42055)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 42055)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..42055
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.010"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(110..1009)
                     /gene="cdd"
                     /locus_tag="PXE50_000473"
     CDS             complement(110..1009)
                     /gene="cdd"
                     /locus_tag="PXE50_000473"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HDL5621410.1"
                     /translation="MFRTDITERFEQLKAAKNCEVTQAIIEQLIKQDFHGQLSYEVVD
                     ELCEKFKRSRVELALYCIAIAACYAVTPVSDFNVGAVAIGKNGDFYFGANQEFSGECM
                     QQSVHAEQSAISHAFLAGETLITDVVVNYTPCGHCRQFMNELNSAASLKVHLPHSQNN
                     LLHSYLPDSFGPKDLGIEKVLFDEQPQQFEVKGDHLQQAAIFAANNAYAPYSNAFSGV
                     ALQVGERIVCGKYTENAAFNPTFLPLQSALNYRLFLGLADIPVTRVVLAEAKGSLSSY
                     AMTQALAKSLFGLEIEYLSLQAV"
     gene            complement(1023..1925)
                     /locus_tag="PXE50_000474"
     CDS             complement(1023..1925)
                     /locus_tag="PXE50_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL5621411.1"
                     /translation="MISSSLKLGYFSLIVATLFWGGNFVLGKVLSGAVQPITLTYLRW
                     LPAFLILVLLFFRPTWRVMHLLKPRLGVMWVLGLLGVILFPATLYEGLKTTTALNASL
                     YLAISPVLVLFLNRLVFKEKISPIILSGAIISLLGVLWLLMQGKLTRLFSLAINQGDL
                     WAIASTISWAVYCCVIRLRPQGISNTVFLTVLVGLAVLTLTPFFIYEYVAESAKNLAN
                     LTALQWSGIGYLVIGPSILSYAFWNFGIAIVGSAKGAVMTNFTPLFAAMFSIILLNES
                     VHTYHIISAILITAGILICSYKKH"
     gene            complement(1922..2278)
                     /gene="folB"
                     /locus_tag="PXE50_000475"
     CDS             complement(1922..2278)
                     /gene="folB"
                     /locus_tag="PXE50_000475"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HDL5621412.1"
                     /translation="MSDKVFIRELTAFASIGAYNWEHTIKQRLVFNIDMAWDFSKAAE
                     TDDVQYCLNYAEVSQKVLDFVESQPFKLVETVAYQLAELLQKEYQLSWIRIELHKPKA
                     VAQASSVGVIVERGHQ"
     gene            2348..2953
                     /gene="plsY"
                     /locus_tag="PXE50_000476"
     CDS             2348..2953
                     /gene="plsY"
                     /locus_tag="PXE50_000476"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HDL5621413.1"
                     /translation="MNLIPYLLILTAYLLGSISSAVIFCKLAGLPDPREVGSHNAGAT
                     NVLRIGGKSAALGVLLFDILKGTLPVAMGIYFELSPSQLGFIALAVCLGHIFPIFFQF
                     RGGKGVATAFGAISALSFIVAGGAIGTWLLVFLISGYSSLSAVFTALVVPFYIWWFEP
                     QFTFPVALVCCLLVYRHHDNIQRLWRGQEDKLWDKFKKNRA"
     gene            complement(3027..4934)
                     /gene="parE"
                     /locus_tag="PXE50_000477"
     CDS             complement(3027..4934)
                     /gene="parE"
                     /locus_tag="PXE50_000477"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HDL5621414.1"
                     /translation="MSEKRYGADEITVLKDLEPVQLRPGMYTDTTRPNHLGQEVIDNS
                     VDEALSGFADKIDVILHADNSLEVVDNGRGMPVDIHSTEKISGVELILTKLHAGGKFS
                     NKNYTFSGGLHGVGISVVNALSERVEIQIKRGGEVYSIAFANGVKVEDLTVIGTCPKK
                     QTGTTVRFYPNPKYFDSPRFSVSRLRHLLRAKAVLCPKLTINFIDKINNTEESWYYED
                     GLSDYLSEALNGYETVPNPPFIGDVTAETEAVSWALTWLPEGGELVAESYVNLIPTAQ
                     GGTHVNGLRNGLLKAMVEFCEIHNLLPKGVKLTADDVWNRCAYVLSLKIQEPQFAGQT
                     KERLSSRQASSYVDSTLKDAFSLWLNQNVQTGKLIAEMAISSAQSRMRAAKKVVRKKL
                     VSGPALPGKLADCTAQDLSRTELFLVEGDSAGGSAKQARDKEYQAILPLRGKILNTWE
                     VSSDQVLASQEVHDIAVALGIDPDSDNLEELRYGKVCILADADSDGLHIATLLCALFL
                     RHFPKLVQNGHVYVAMPPLYRIDIGKDEVHYALDEAEKEAILARLAKKKGKPNVQRFK
                     GLGEMNPSQLRETTMEPSTRRLVQLTFDDTVEEGELNTFEIMDMLLGKKRAEDRKQWL
                     QNRGDEADLAV"
     gene            5142..5366
                     /locus_tag="PXE50_000478"
     CDS             5142..5366
                     /locus_tag="PXE50_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HDL5621415.1"
                     /translation="MVVKILKRKSQKTLQQIYTQPISANIKWTNIEALFLELGAEIEE
                     REGSRIAVVLFQQVRVFHRPHPNPDTDKGR"
     gene            5409..5738
                     /locus_tag="PXE50_000479"
     CDS             5409..5738
                     /locus_tag="PXE50_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HDL5621416.1"
                     /translation="MRNIMDINGYKAVIAYDPETELFRGEFIGLNGGADFYADNVIQL
                     KKEGELSLNIFLELCREKGIEPFKQYSGKFNVRLSPELHKAAVIAATAENLSLNEWIN
                     QTLEKSV"
     gene            complement(5777..6163)
                     /gene="cueR"
                     /locus_tag="PXE50_000480"
     CDS             complement(5777..6163)
                     /gene="cueR"
                     /locus_tag="PXE50_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005654127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(I)-responsive transcriptional regulator"
                     /protein_id="HDL5621417.1"
                     /translation="MNISQAAEKTGLSAKQIRDYEKAGLLPPTSRTEAGYRFYNATDL
                     SRLHFISNARKVGFSLAQISELLKLNDNPNRSSRDVKQLTEQHIGELEQKIADLNQML
                     TLLKSWSSSCCGNANSECSILNGLNG"
     gene            6252..6452
                     /locus_tag="PXE50_000481"
     CDS             6252..6452
                     /locus_tag="PXE50_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HDL5621418.1"
                     /translation="MTITLQLDGLHCGNCVKSVEKALNGVAGVNQVSVTLEPQIAVVE
                     GSAEAQALIEAVEDIGFDAKLA"
     gene            6505..8697
                     /locus_tag="PXE50_000482"
     CDS             6505..8697
                     /locus_tag="PXE50_000482"
                     /EC_number="3.6.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005710411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HDL5621419.1"
                     /translation="MTSTAHYSPEQQLLIDGMHCAACVRRVEKALLKVEKVEFASVNL
                     ADQTAFVQGNANPEALVAAVVKIGFGAEVLESEEERRIKQQAQTQRVLGHKRTQFMLA
                     LVVGFALVAFGFYKGMTVNETNRSLWLSWAGISLATMYFSGKDFFLGAFSALKNRSAN
                     MDMLVAISTGTAWLYSCWLTLFPQPNAHVYFEASVMILGFINLGKYLELKAKQRSSLA
                     LEKLLDLAPKQAVIFEENIAKTIPAKAIKPQMRVQALTGDRLAVDGILDSGSIWVDES
                     MLTGEALPVEKKIGDKVRAGTLVQDGSGTYIAEQVGSQTALARVINAVRHAQSSKPPL
                     AQFVDKIAAVFVPVVVSIALLSALIWLAVGQDFAFALSIFTTVLIIACPCALGLAIPL
                     STIAGVARSAEFGVLVRNIEALQASSEIDTLVFDKTGTLTTGRMEVSDVLTFNGFEQK
                     RLLQLAKSVEQHASHPIAKAIAKFAENQTACGVTDVQVLKGLGISAKYEGSTIRMGNW
                     QFVGETIQANLASLLPAKEGDFSSKIFVSVDNQLAGVLSVSDQLRPEAKATIHQFQAE
                     GYQCVMLTGDRQQTADYFANALGLDGVIAEVLPEQKAEKIRALQAEGKKVAMIGDGIN
                     DAPALAQANVGIAMHNGSDIAVETADLSLMREGLAPLMQILPFSKKVLKNMKQSLLGA
                     FIYNVIAIPIAAGVLYPFTGWLLNPMIAAIAMTLSSITVVLNSQRLLK"
     gene            complement(8750..9535)
                     /gene="truA"
                     /locus_tag="PXE50_000483"
     CDS             complement(8750..9535)
                     /gene="truA"
                     /locus_tag="PXE50_000483"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HDL5621420.1"
                     /translation="MKIALGIEYDGSRYFGWQRQEAVESVQQQLEQALSVVANSPVEV
                     FCAGRTDAGVHGTGQVVHFETQANRPLQSWCFGTNAHLPDDIAVKWAVAVNEDFHARF
                     SATARRYRYIIFNQKLRSAILPKGVTHFHFPLDERKMHQAGQYLLGENDFSSFRAAKC
                     QSNTPWRNIHHLNVSRQGNYVIVDIQANAFVHHMVRNIVGTLLEIGQGRQPVEWAKWV
                     LEQRDREKAAPTAKAEGLYLVEVHYPEHFGIPKTPLGPLFLAD"
     gene            complement(9600..10289)
                     /gene="folE"
                     /locus_tag="PXE50_000484"
     CDS             complement(9600..10289)
                     /gene="folE"
                     /locus_tag="PXE50_000484"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HDL5621421.1"
                     /translation="MTTISPELTITENTLSPEAQKVRQALLAKGIETPTVTHTKDKAS
                     RRAEIQQHMQAVLELLGLDLSDDSLEETPHRLAKMYVDEIFSGLDYATFPKITNIENR
                     MKVSEMVLVDDITLTSTCEHHFVTIDGKVAVAYYPKKWVIGLSKINRVVQFFAQRPQV
                     QERFTEQILTAFQTILETDDVAVYVKATHFCVKCRGIKDTNSYTVTSAFGGVFLEDRE
                     TRKEFLGLLNK"
     gene            10390..11097
                     /locus_tag="PXE50_000485"
     CDS             10390..11097
                     /locus_tag="PXE50_000485"
                     /EC_number="2.7.1.166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid kinase"
                     /protein_id="HDL5621422.1"
                     /translation="MQNIQYLFNADLIPEHQAEFVQSLLTCKNFDNSDRLLGFSKGRG
                     TTWFLDTSAELGINVVLRHYYRGGLFGKIIKDSYFFTRFEATRAYKEFFLLQQMLAWG
                     LPVPRPVAIKIERHFCCYRADIMLEKLENTQDLSKILQSHSLSNEQYEQIGKLIRSLH
                     NHQIHHSDLNIHNILLGNDGKFCLIDFDKCGIEPGENWKQNNLDRLLRSFKKEQGRLN
                     IFFSEENWQAVLRGYTL"
     gene            complement(11152..12249)
                     /gene="apbC"
                     /locus_tag="PXE50_000486"
     CDS             complement(11152..12249)
                     /gene="apbC"
                     /locus_tag="PXE50_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HDL5621423.1"
                     /translation="MNQLNEQQLVEIKAILQQFSHPTLQKDLIALNAFKKAELGGDIL
                     RIEITMPFAWNSGFETLKAETEAKLKQVTGSSGVKWVLNYQIATLKRANKHPAVNGVK
                     NIIAVTSGKGGVGKSTTSVNLALALRAQGTRVGILDADIYGPSIPHMLGAKDQRPTSP
                     DNKHITPITAHGLQSNSIGYLMEEDNATIWRGPMASSALSQLLNETWWNELDYLVIDM
                     PPGTGDIQLTLSQQIPVTGAVVVTTPQDIALLDAIKGISMFEKVSVPVLGVIENMSMH
                     ICSNCGHHEAIFGTGGAEKIAQKYGTKVLAQLPLHIRLREDLDSGVPTVVAAPEHEIS
                     QAYLALAEKVASELYWQGSVIPSEIMIREVK"
     gene            complement(12246..13793)
                     /locus_tag="PXE50_000487"
     CDS             complement(12246..13793)
                     /locus_tag="PXE50_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL5621424.1"
                     /translation="MLKSLQAVTFVKKIAKVTACILLITSCDQLICPQSIQSVWVENR
                     QSDTLLKRAIYSAVFQLDPHKIKASADAAPLRDLLVGLTAYNRKGDVVPAIAQNWFTE
                     DEKEWLFILDEKAVWSNGQPVTAQDFVASWRRLIDPQNHSVLSKYLIYMGIENAKAIE
                     EQIKSVEELGVEALNAHTLRIRLNHPNHQLPEMLAHSALLPTYQGIAPTIDNFVSNAS
                     YRLEKLDAQKMVLKARTQEIPFQTIEYDLITTIQNCSAFDIVENPLLNKKTNIVKFPR
                     LCSYYYEFNFDDPLLAKREIREAIRTMVASANSGQEYGVPSQSVIPHSLVKDREKRWN
                     PVVVEQLLTKAGISPYNPLKLTLLYDENSINIANQVTRALSQSELFNITPKMVDWQTL
                     NKVREQKDYQIARAGWCADYPDPIVFLQKFHSMSPDNHSGYKSEIVDQKLNRLQTETL
                     SAEARESLIQEISEQLYSDVAVLPLFQYHHRVGIVSSLLGIDLNNDSEVIYSKDLKRN
                     LANKDNQ"
     gene            complement(13819..14469)
                     /locus_tag="PXE50_000488"
     CDS             complement(13819..14469)
                     /locus_tag="PXE50_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchE family NAAT transporter"
                     /protein_id="HDL5621425.1"
                     /translation="MDIIINFAIYLQFFIGLFAIVNPFGSLPIFFSMTAHQYEGERNR
                     TSLITAVSIGVILLVSLYFGNLILNAFSISLSSFRVAGGILIVSIAMTMISGKLGEHK
                     QNKEEKNEDITEYENIGVVPLAMPIMAGPGAIGSTIVWGTRYHTWEDYVGFSIAIIVF
                     ALICYILFRYSAPLVKKLGKTGSNVVTRIMGLILMALGIEIIVAGITTLFPVLLVK"
     gene            complement(14591..16462)
                     /locus_tag="PXE50_000489"
     CDS             complement(14591..16462)
                     /locus_tag="PXE50_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HDL5621426.1"
                     /translation="MIEKMHERTNGPVFKIIFALVSISFVIGGIGTGLISQDNSVAKV
                     NGEEISQQLFNNTLNREQNRLNAELGSRFWDLMDSPEYAAQFNQSVLNGLIDEELLRQ
                     YAKELKLGISADQIKSEIVNSQMFQQDGKFSNELYQQTLRHNNLSADGYAAIVQEGML
                     QSQLQEGIINSDFNVPAQQALLAKLLLQQREVRLAEFSVAKEMENQTASEQELRAYYE
                     ANKTKLLAPEKLAVEYVTLSPKDVESKVEITNEQIQTYYDRNKADYVTKGEAHLAHIQ
                     VASEAEAQAIEQALKNGEDFATLAKNKSSDTLSANNGGDLGWAKAGTFPKAFEDAVAN
                     LTAGQMSAAVKVDNAYHIIKVLERKPEQVIELAQVKDKIAQTIRQELVLTEYFTVARE
                     MANKAFENNSSLEEVAKAGNVELQKTDLFTRENVPTALQNEKVLKVLFEGELRQNKQN
                     SDALDVGNDANPQTLFVRVSDYDAERPQTFDEAKAAVENFVKAEKAEKALLAKVEENV
                     KALNEGKSVDVKFNAPQTLVYMQAEVENPVLAGTIFAMKKAQDKTTYQMARNQKGDVV
                     IVALDNITEGNAEQFKTLAPQFEQANRLILRNEFLQSLRAKASIEVNEDFMQQRSSH"
     gene            16644..16913
                     /gene="rpsO"
                     /locus_tag="PXE50_000490"
     CDS             16644..16913
                     /gene="rpsO"
                     /locus_tag="PXE50_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004933502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HDL5621427.1"
                     /translation="MSLSVEAKAKIVAEFGRDAKDTGSSEVQIALLTAQINHLQAHFA
                     EHKKDHHGRRGLLRMVSRRRKLLDYLKRTDLAKYSETIARLGLRR"
     gene            16985..17854
                     /locus_tag="PXE50_000491"
     CDS             16985..17854
                     /locus_tag="PXE50_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 domain-containing protein"
                     /protein_id="HDL5621428.1"
                     /translation="MAFASLFTLLDDIAAVLDDVSIMTKVAAKKTAGVIGDDLALNAN
                     QVSGKNVVPERELPIVWAVAKGSLINKVILIPLALLLSVFLPQAIIPLLMIGGAYLCF
                     EGVEKLLHRLLHKNNQAHSDETETLSEKDKIKGAIRTDFILSAEIIIIALGVLQDSST
                     LTQILSLSAIGVGITLFVYGLVGLIVKLDDIGLWLMQKKSTFSQAVGKGLLFAMPWFM
                     KGLSVIGTIAMFLVGGGIFTHNLPMIHHFVEQFGISPHFSTLVDFAVGIVVGIIACLI
                     ILPLMKLFSKKAH"
     gene            complement(17944..19209)
                     /locus_tag="PXE50_000492"
     CDS             complement(17944..19209)
                     /locus_tag="PXE50_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis protein HemY"
                     /protein_id="HDL5621429.1"
                     /translation="MFRTLFLMLLLLVGLISGPYLAGNQGYVRIETATTVIEMSIVML
                     VVFFVLAMAVVYLLEWIVTKICRMSNGAYNWFSTRKHKKAQQETLEGLMRMSEGNYSK
                     AEKLFSKNAKHADEPVLNLIKAAEAAQQNGDDLAANKYLIKATEIAGPNNVAVELVRT
                     RILLQQGKLPAARTAIDSLLELAPHSDEVLRLAIQIYKESRAYVALDRLLVEIGQRNF
                     LTAEEYAELEYFVDDGLQDERLQEEGQEGLLSWWENQPNRRRKSVYSRVGVIKRLIDS
                     DDHQSAQEIALETLKKFEDEQLQGLFVQLTRLQIDSDSKLLKVLAKRADKANVKYTDD
                     YARALGYIYTRDGQYQKAKSQFELLLAHDECVADDRIMALHVAEQMGDTLMANRIREE
                     NLKQVNMATQSKVNEPLALPQTATESNSL"
     gene            complement(19228..20538)
                     /locus_tag="PXE50_000493"
     CDS             complement(19228..20538)
                     /locus_tag="PXE50_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HDL5621430.1"
                     /translation="MSRSKKVTEHLEHSAEKVVEEAQQAVDSAGSFAKKEIEEDVVNE
                     AIEKDIQTEMQKAPKEQVVVQKSGGKGLALVALLVALAVGGAGHYMANKKFAEVESQI
                     QAVSAKANQPTTQTMVEMPNFENEKAQIAELVTEYQKALERIKALETAQNGYTQQISS
                     LQLQLQKLNNTSGSDNTFWLLSEADFLLNNAARKVVLDNDIETAKNLLLEADQVLSKA
                     PNTIHIREAIKTDLNTLTALHQIDQNALMQRVANLANKLDDLPILESEQASNSKQDGQ
                     VSDSLADWEKNLEKSAASFLDHFIRVSKRNAADEKAFVAPNQEIYLRENIRLRLQIAI
                     LAVPRQQSELYKKSLQTVGSWVRSYFETSNENVQHFLKELDELAEQTIYVDAPTSLQS
                     LKVIAQQLNKTPEKIEKVEIKAEKELEQAEPVKAEQDAMPLSAQ"
     gene            complement(20550..21314)
                     /locus_tag="PXE50_000494"
     CDS             complement(20550..21314)
                     /locus_tag="PXE50_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HDL5621431.1"
                     /translation="MNVLVTRLDSRGQELVDMLNEQQIFAIHQPLFTIEAGKELPLLP
                     SAISRLKSDDYVFVVSPNAVDYAAKTLVDTGFHFRSDLKYFAVGQRTAKYLTEKAEQA
                     VIYPIEFENSEGVLALPEMQNLTDKTILILRADSGRELLAETAVLRGATIQYLECYRR
                     EPVTDDIPEKISLCKRLGVDTIVITSSEILRSLYEQAKADCRAWLFECDLVVVSRRIA
                     KIAKQMGWQEDKIRVSDKADNVTLMNTLLFKVGKSN"
     gene            complement(21314..22249)
                     /gene="hemC"
                     /locus_tag="PXE50_000495"
     CDS             complement(21314..22249)
                     /gene="hemC"
                     /locus_tag="PXE50_000495"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HDL5621432.1"
                     /translation="MKDILRIATRQSPLALWQANFVKSELEKHFPQLSVELVTMVTKG
                     DIILDTPLAKIGGKGLFVKELELALLENRADIAVHSMKDVPMSFPEGLGLAVICERED
                     PRDAFVSNNYHSLEDLPKGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDN
                     GEYDAIILASAGLIRLGLQERIRSYISVEQSLPAAGQGAVGIETRANDERILNYIAKL
                     NHSSTACCVMAERAMNTRLQGGCQVPIGGYATLEGDELTLNALVGSLDGSQIIRASAK
                     GHKQEAEQLGILVAEQLLAQGADKILAAVYNENVQ"
     gene            22545..25154
                     /gene="adhE"
                     /locus_tag="PXE50_000496"
                     /gene_synonym="adhC"
     CDS             22545..25154
                     /gene="adhE"
                     /locus_tag="PXE50_000496"
                     /gene_synonym="adhC"
                     /EC_number="1.1.1.1"
                     /EC_number="1.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetaldehyde-CoA/alcohol
                     dehydrogenase"
                     /protein_id="HDL5621433.1"
                     /translation="MAKNTQPFDAQAEVNELVEKGLKALDEFRKLNQEQVDFIVAKAS
                     VAALDKHGILAMHAYEETGRGVFEDKATKNLFACEYVVNNMRHLKTAGVISEDDVTGI
                     TEIADPVGVVCGITPTTNPTSTTIFKALIALKTRNPIVFAFHPSAQQSSAHAAQIVRD
                     AAVAAGAPENCIQWITQPSMEGTSALMKHPGIATILATGGNAMVEAAYSCGKPALGVG
                     AGNVPAYVEKTAKLKQAVYDIVMSKSFDNGMICASEQAAIVDKEIYAEFIKEMQSYGV
                     YLVNKKEKALLEKYIFGIDKAKDENCSGAKLNSAVVGKPAAWIAEQAGFKVPEKTNIL
                     LAECAFVGEAEPLTREKLSPVLALLKSDSTEHGLELSEAMVNFHGLGHSAAIHTENKA
                     LAKTFGERVKAIRVIWNSPSTFGGIGDVYNSFLPSLTLGCGSYGKNSVGNNVSAVNLI
                     NIKRVGRRRNNMQWFKVPSKIYFERDSIQYLKSMHDVHKVMIVTDRSMVDLGFVDRIT
                     EQLRQRRNQVMIQFFTDVEPNPSLQTVQRGTELMRSFQPDTIIALGGGSPMDAAKIMW
                     LFYEQPEVDFRDLVQKFMDIRKRAFKFPQLGRKAKFVGIPTTSGTGSEVTPFAVITDG
                     DIKYPLADYSLTPTIAIVDPALVMSVPSHVAADTGLDVLTHATEAYTSILANDYTDGL
                     ALQAIKLVFENLEKSVKEFDETAREKMHNASTMAGMAFANAFLGICHSMAHKIGGKFH
                     TIHGRTNAILLPHVIRYNGTRPTKVATWPKYTNYVADVRFQDIARMLGLPAETPEQAV
                     EAYAQAVHDLAVRCGVKMSLREQGVDEQAFLNARRELALHAFEDQCTPANPRLAMIED
                     MEAIMTKAYYGKE"
     gene            25301..26197
                     /locus_tag="PXE50_000497"
     CDS             25301..26197
                     /locus_tag="PXE50_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HDL5621434.1"
                     /translation="MQITILDGGISRELMRRNAPFHQPEWSAAALYEGPHFVQAVHED
                     FIAHGAEVITTDSYAVVPFHIGEKRFAADGKMLADLAGRLAKQAVKNSGNIATQIAGS
                     LPPMFGSYRADLIQMERFAEVAQPLIDGLSPYVDIWLCETQSAIIEPISIKALLPKDN
                     RPLWVSFTLTDDEPTTEPQLRSGESVKQAVEEMVKLGVQAILFNCCQPEVIGEALSVT
                     QKTLAELKATHIRTGAYANAFAPQPKDATANDGLDEVRQDLTLEAYLGWAKKWTEQGA
                     TIIGGCCGIGVEYIETLAKNLK"
     gene            26207..27616
                     /locus_tag="PXE50_000498"
     CDS             26207..27616
                     /locus_tag="PXE50_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDL5621435.1"
                     /translation="MSNKKIGLISLTALVLSSMIGSGIFSLPQNMAAVAGAEAITIGW
                     LITGVGIIFLGLSFFFISRLRPDLDGGIYTYAREGFGELMGFMSAWGYWLCATIGIVG
                     YLTVAFEGLGVFTDNPNTVIFGQGNTLASFIGSSIIVWLVHALIAGGIKEAAFVNLIA
                     TFVKVAPLILFIGLGIWYFDVDLFNSDVKATALNNSVSDQVKSTMLITLWVFTGVEGA
                     SVLSAHAKKRSDVGLATVLGIIIALALYVAITILSLGILPRETIANMANPSMGPLLDA
                     MMGPTGKVIITACLIVSVLASYISWTMYSAEVPYRGSKNGAFPKILDKVNKNGTPINS
                     LWFTGFIVQFCLVLVFVFEQSYNTLLLISTSMILIPYFLIGAYLFKLAIQTNATWYIK
                     LTGFMAALYGLWIVYAAGLEYLLLSVVLYVPGILLFLYSNYKFNGRLTLSTAEKVILI
                     VLLVIFGYAVIELPALLAA"
     gene            27723..28946
                     /locus_tag="PXE50_000499"
     CDS             27723..28946
                     /locus_tag="PXE50_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF711 family protein"
                     /protein_id="HDL5621436.1"
                     /translation="MQTYQHKALCRVRTITLFLSLTKDKLQWETALNAAKAEFDLLVP
                     AIQTQGYHIQSIRIVTNSFGEYLDLTNIETAKQDLAYLKQLLTQLNDSGLRIRFAIGE
                     AKTPHELALLPELILNYGDLSNACVNIEPDEFGILDNETILQSAQIIKQIAEITPRGE
                     GNFNFTVNFNCKPFIPYFPASYHSSKLPNSFVIGLETPDLLVAVLKELKASPHNDFYR
                     QCYETMSQALQYHVDEVLEAVKSVQHKLQFAFAGIDSSAAPSKNCASMTEVYELMGVP
                     FFGAAGTVEASSLLTKVFKSIKHVPLVGFSGLMLAVTEDLGLAAGTHKAQFDIRALLT
                     YSAVCGIGLDTVPISNEATVEQIAALMRDTGTMAFRLNKPLTVRLFPIPNKSAGEVTE
                     FESDDLCNCRILAVP"
     gene            complement(28984..30180)
                     /locus_tag="PXE50_000500"
     CDS             complement(28984..30180)
                     /locus_tag="PXE50_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HDL5621437.1"
                     /translation="MKQVIRFIVFSTLSLFSFSTFAKTIVAIDAGHGGKDPGAIGKNL
                     GILEKSVTLAISKELKALLDADPNFKAVMTRSGDYFIQLPQRTEIARKHRADLLVSIH
                     ADSSPRGDSLKGASVWVLSNSRASDEMGKWLEDHEKQSELLGGAGSVLSSNNERYLNQ
                     TVLDLQFSHSQRAGYELGKSILAKMSNVAALAKSSPQHASLSVLRSPDIPSVLVETGF
                     LSNSTEEAKLASANYRKQVARAIYNGLVAYRAKNAVASSSVSKKSDKEDKQNKKEEKT
                     AKADLTKKPASEKQEKNTQSDKTKLKEKSKKEDKKEDSAKTNKKKEQQLKEKTALEKD
                     QKNQSKKSDSQREIKVSNSGYHIVQQDETVYSIARAYGTTPQKISELNNLKNYQITVG
                     KKLKVK"
     gene            complement(30200..30691)
                     /gene="tsaE"
                     /locus_tag="PXE50_000501"
     CDS             complement(30200..30691)
                     /gene="tsaE"
                     /locus_tag="PXE50_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HDL5621438.1"
                     /translation="MTDSLSFYCEDETKLLEFGQSFALELKKYLLQDQAHSLVVYLNG
                     ELGAGKTTLTRSIVRAFGHQGNVKSPTYTLVEEYQLPPFSLYHFDLYRLADPEELEFM
                     GIRDYFKPQTLCLLEWAVKGKGMIPEADFVIQIDYKNDGRQISLLPQNQTAVDILVNF
                     HQK"
     gene            complement(30691..31245)
                     /gene="orn"
                     /locus_tag="PXE50_000502"
     CDS             complement(30691..31245)
                     /gene="orn"
                     /locus_tag="PXE50_000502"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HDL5621439.1"
                     /translation="MAQNEQNLIWIDLEMTGLDPEKERIIEIATIVTDKDLNILAEGP
                     VLAVHQTDDLLEKMSDWCVKTHTANGLIERVKASKLTERAAELQTLDFLKRWVPKGAS
                     PICGNSIAQDKRFLYKYMPDLADYFHYRHLDVSTLKELARRWKPEILDKFSKGNTHLA
                     LDDIRESINELKFYREHFIQLDQK"
     gene            complement(31255..31734)
                     /gene="coaD"
                     /locus_tag="PXE50_000503"
     CDS             complement(31255..31734)
                     /gene="coaD"
                     /locus_tag="PXE50_000503"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HDL5621440.1"
                     /translation="MSYNVIYAGTFDPITNGHLDIICKASHLFGKVIVAVAQNPSKQP
                     LFSLEERVELVKQSCTQWQNIEVIGFSGLLADFAKQQNAKALIRGIRGADDIDYEIQL
                     AQLNYKLSGDLETIFFPPSIEWRYLSSTMVREIYRHNGDISQFVPQAVKNALKIAKV"
     gene            complement(31736..33016)
                     /gene="waaA"
                     /locus_tag="PXE50_000504"
     CDS             complement(31736..33016)
                     /gene="waaA"
                     /locus_tag="PXE50_000504"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HDL5621441.1"
                     /translation="MLRLLYICLSYLLQPVVLLLMWYKGRKQPAYRKRLWERYGIYDE
                     SEKPKAKGVVIHAASVGEVIAATLLIKAVSKQYPELPLIVTTVTPTGSGRVQAAFGNS
                     VSHFYLPYDLPDAIERFLNFIDPKLMIVIETELWPNLIRKVNIRKIPFVIANARLSPR
                     SAKRYGWVKGSIKDMLNQISLIMAQDEVSRDRYLALGYAPAKMVNTGNLKFDLEITPQ
                     LHQSVIKTKASLNLTERPIWIAGSTHEGEEKLILDAHKLLLEHYPNLVLILVPRHPER
                     FGLVELLIQKSDLNYVKRTENKTLSQNTQVMLGDTMGEMMLLYGLSDIAFVGGSLVKH
                     GGHNPLEPIAFNIPVVSGLYTYNFPEIFEKLREVKGVIEIESSVEALTESIQLLLKQP
                     QIGQEIAKSGLSVLQENQGALKRHLDLLASYLEK"
     gene            complement(33196..34575)
                     /gene="yegQ"
                     /locus_tag="PXE50_000505"
     CDS             complement(33196..34575)
                     /gene="yegQ"
                     /locus_tag="PXE50_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HDL5621442.1"
                     /translation="MTLKYAKPELLSPAGSLKNMRYAFAYGADAIYAGQPRYSLRVRN
                     NEFNHANLKVAIDEAHALGKKFYVVVNIAPHNSKLKTFIKDLKVVVDMKPDALIMSDP
                     GLIMLVRENFPEMDIHLSVQANAVNWATVKFWRQMGLTRVILSRELSLEEIEEIREQV
                     PDMELEIFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWEYKMEEGKIDEVGQI
                     VPKYEPEIEVKNVAPTLGNGEATDKVFLYTESQRPDEQMTAFEDEHGTYFMNSKDLRA
                     VQHVERLTQMGVHSLKIEGRTKSFYYCARTAQVYRKAIDDAAAGKPFDESLMDTLESL
                     AHRGYTEGFLRRHTHDEYQNYEYGYSISERQQFVGEFTGKRNAEGLAEVAVKNKFLVG
                     DSVEMMTPKGNIVFKIERMLNRKNENVDAALGDGHFVFLDVPADIELDFALLMRNLVN
                     TNTRNPHQA"
     gene            34703..35074
                     /locus_tag="PXE50_000506"
     CDS             34703..35074
                     /locus_tag="PXE50_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621443.1"
                     /translation="MKLKYLLATTLLAFSTFTAAQSIKTEMMQMNMQANKLMRAESAE
                     EFSEIANDFIIITEKTKGIFPNSVEGDKAAQEDYQAGMQKLIDMVNQASEKAQAGELQ
                     EAKMLISELEMIKREYHKKYK"
     gene            complement(35113..38589)
                     /gene="dnaE"
                     /locus_tag="PXE50_000507"
     CDS             complement(35113..38589)
                     /gene="dnaE"
                     /locus_tag="PXE50_000507"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HDL5621444.1"
                     /translation="MSDCRFVHLKVHSDFSMINGLAKVKSLVKTAAANNMVAMGLTDF
                     INFCGLVKFYGEALGAGIKPIIGADVYVRTESGNEDYFELTLLAKNNKGYHNITQILS
                     KAYQQGYVEFPMVEREWLAELNEGIIILSGGRMGDVGKALLKENRQEAEEKLAFYQQY
                     YPNHFYLSVCRTGRADEERYIKQAVEFSQKNAIPLVAVNDVVFLKEDDFDAHEIRVAI
                     HDSYTLDDPKRPKKYSPKQYFRTEEEMCKLFADLPSALANTVEIAKRCSVTVRLGEYF
                     LPNFPTGELSTEDFLVKKSKEGLEERLEFLFPDPEERANKRSVYDERLQVELDVINQM
                     GFPGYFLIVMEFIQWSKDNDIPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFLN
                     PERVSMPDFDVDFCMDGRDRVIEHVAETYGRQAVSQIITFGTMAAKAVIRDVGRVLGH
                     PYSFVDRISKLIPPDPGMTLEKAFAAEPKLPELYEADEEVKDLIDMARKLEGVTRNAG
                     KHAGGVVIAPTAITDFSPLYCDSEGLHPVTHFDKNDVEYAGLVKFDFLGLRTLTIIKW
                     ALEMINERLAREGKEPIRIETIPLDDKKSFALLLAAKTTAVFQLESRGMKDLISRLKP
                     DCFEDIIALVALFRPGPLESGMVQNFIDRKHGKEEVSYPDPQYQHECLKPILEPTYGV
                     IVYQEQVMQIAQELAGYTLGGADLLRRAMGKKKPEEMAAQREVFEKGAEAKGIDGKLA
                     GQIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTSEMDNTDKIVG
                     FYDECMNMGLTVVPPDVNSGKHRFSVNEKGEIVYGLGAIKGVGEGPIEAILAARQKEG
                     KFKDLFDLTARVDLKKINRRTFESLIMSGAFDKLGPHRAALMKNLEDALKASDQHAKM
                     EELGQSDMFGVLTETPEEVQNAYANTPKWSEQVILDGERATLGLYLSGHPIGRFLKEL
                     SHYAPNRLNELQPTFRGQMTTVSGIVMASRVAVTKRGSRIGIATIEDRSGKLDITLFS
                     EALENFGHLMQQDQIIVATGSVQFDDFSGGLKMSAREVLSLDEARGRFAKSLALAISK
                     EQLSADFIKKMTAIITPHKEGTLPLHFYYQSPEGRVLLKGGVEWRISPNEAMFSELKA
                     LLGENSVELEFE"
     gene            complement(38814..39911)
                     /gene="lptG"
                     /locus_tag="PXE50_000508"
     CDS             complement(38814..39911)
                     /gene="lptG"
                     /locus_tag="PXE50_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HDL5621445.1"
                     /translation="MQFFSMNILERYIGKTILSAIFLTLFMLIGLGAIIKFVEEFRDV
                     GRGSYDGLKAAYYTFLTIPRDIETFFPIAALLGSLLGLGNLASLSELVVMQASGFSRF
                     RIGLAVMKTALPLVIFTMIIGEWGVPQTEQFARNMRSIAQSGGSMLATKDGFWAKDGN
                     SFIYINHIKNEKSLDNVLIYQFGEGQNKRELQSVLKARTANYSDEKGWVLSKVEKSTV
                     GENQIQQAKQPDQVWQTSLTPSKLGIVSLKPESLSISGLADYVGFLKDTGQDPKRFEI
                     TFWRKVFQPISMAVMMLLAISFIFGPLRSSTMGAKIVIGIVAGFMFYVANIVFGNLSL
                     IATWLPIPVGALIPSLLCLIIVWWLLSKKRD"
     gene            complement(39911..41020)
                     /gene="lptF"
                     /locus_tag="PXE50_000509"
     CDS             complement(39911..41020)
                     /gene="lptF"
                     /locus_tag="PXE50_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HDL5621446.1"
                     /translation="MILSRYLTKEIFKSQLAILFILLLIFFCQQLVRVLSSAVSGKVP
                     ADLVVSLLGLGMPTMAQLMLPLSLFIALLLTLGRFYAESEITVMRACGIGQGLLVKVA
                     MFLSIFTTALAVYNVFWLTPWAINKQSEMLAEAKANPRFAALSAGQFMSAGGYVLFID
                     KIENNSLNDIYVFQPEQQKKNKPSVVVAESGTLQGLPNGDQVLTLAESKRFEGTPQSA
                     DFRISHFENYSAYLGYQDVESDEKLVQRADFKKLMETKTPEAKAELHWRLALILAVPL
                     MALLAVPMSSVNPRQGRFAKLLPALLLYLIYFLLQSSLKSSGASGKLNAEVLMPLVSV
                     AFLVLGVILNAWDSKFMSKLRYQFGAKKLTNKAVA"
     gene            complement(41194..41991)
                     /locus_tag="PXE50_000510"
     CDS             complement(41194..41991)
                     /locus_tag="PXE50_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621447.1"
                     /translation="MRFWGKTFVVGLIGLGTQNTIFANDDAQISRYEQAKLRLSYDGN
                     VGNLLQQLSQRLKVGFIAYDVDITRKISLQNETETAIKTINEQIESQLTNIDVRFEKI
                     GERLFLVVSAKDVAPLLQNEPKEVQFVGDVIFDGEPNLTEQAQSTAEATKVQNILNIA
                     TNQEKIMAAKGKKAPQYKTVTKDNIGLKNIRVTALGTFLVFDTSVDAAKLRVKGNFED
                     IAQGENIIAILHQNTEAPPKIEIEDSQGKKLILEAHKATSSKKSKKQ"
BASE COUNT        12056 a         9395 c         8000 g        12604 t
ORIGIN      
        1 acgatatagg caaatataat tgttgcaaaa gtgtgaagct catcaaaaaa tttaacacta
       61 aaaaataaat tgcttaaaga tacagcacct ttgcaaaaat aaatcaaaat tacaccgctt
      121 gtagcgaaag gtattcaatc tctaacccaa atagtgattt tgccaatgct tgagtcattg
      181 cataactact gagagagcct ttcgcctcag ccagcacaac tcgagtaacg ggaatatcgg
      241 caagccctaa aaataatcga tagttcaacg cgctttgcaa cggtaaaaaa gtaggattaa
      301 aagctgcatt ctcagtatat ttaccacaaa caatacgctc acctacttgc agtgcaaccc
      361 cactaaatgc gttgctgtaa ggggcataag cattattggc agcaaaaatt gccgcttgtt
      421 gtaaatgatc gcccttaacc tcaaattgtt gcggttgttc atcaaataag actttctcaa
      481 tccctaaatc tttcggtcca aaactatccg gcaaatagct atggagcaaa ttattttggc
      541 tatgcggtaa atgtactttt aagcttgccg cactgtttaa ttcattcata aattggcggc
      601 aatgcccaca aggggtatag ttcacaacca catctgttat caaagtttcc cctgctaaaa
      661 atgcgtgcga gattgcactt tgctctgcgt gaacggattg ttgcatacat tccccggaaa
      721 actcttggtt tgccccaaaa tagaaatctc cgtttttgcc aatcgcaacc gcccctacat
      781 taaaatcgga aactggtgta accgcataac aggcagcaat ggcaatgcaa tataaagcca
      841 actcaacacg agagcgttta aatttttcac agagttcatc aaccacttcg taagagagct
      901 gcccgtgaaa atcttgcttg ataagttgct caataatagc ttgtgtaact tcacagtttt
      961 tcgctgcttt taattgttca aaacgctctg taatgtctgt tcgaaacata ctgtacctcc
     1021 gtttaatgtt ttttatagct gcaaatcagt atccctgccg taatcagtat ggcactaata
     1081 atatggtaag tatgaactga ttcatttaat aaaataatac tgaacattgc tgcaaagagc
     1141 ggcgtaaaat tagtcattac cgctccttta gcagaaccga ctattgcaat gccgaaattc
     1201 caaaacgcat aagagagaat agaagggccg ataaccaaat agcctatccc actccattgt
     1261 aaagcggtca aatttgctaa attttttgca gattctgcta catattcata gataaaaaat
     1321 ggcgttaacg ttagaactgc cagccccact aatacggtca aaaacaccgt attgcttata
     1381 ccttgtggac gtagccgaat cacacaacaa taaaccgccc agcttatagt agaagcaatc
     1441 gcccataaat caccttgatt aattgccaag ctgaataagc gagttagctt cccttgcatc
     1501 aatagccaca gcactcccag caaactgatt attgccccac ttagaataat cgggctgatt
     1561 ttctccttaa aaacgagccg atttaaaaat agcaccaata caggcgaaat agctaaatag
     1621 agactcgcat tcaatgctgt tgtcgttttt aaaccttcat ataaggtagc cgggaataaa
     1681 attaccccaa gcagacctaa tacccacatc acacctaaac gaggttttaa taagtgcatt
     1741 acccgccaag ttgggcgaaa aaagagcaaa actaaaatta aaaaagccgg caaccaacgc
     1801 aaataggtta aggtaatagg ctgaactgcc ccacttaaca ctttgcctaa tacaaaattc
     1861 ccaccccaaa aaagagtagc aacgattaaa ctgaaatacc ccaatttcag tgatgatgag
     1921 atcattgatg acctcgttct acaatcacac ctacactgct tgcttgggca accgctttcg
     1981 gcttatgcag ttcaatccga atccaagaaa gttgatactc tttttgtaat agttccgcca
     2041 gttgataggc aacagtttca actaatttga aaggttgaga ttcaacaaaa tccagcactt
     2101 tttgcgatac ttccgcataa ttcaagcaat attgtacatc atcggtttct gccgctttgg
     2161 aaaaatccca cgccatatca atgttaaaaa ccaagcgttg cttaatcgta tgctcccaat
     2221 tgtaagcccc aatggaagca aaagcggtta gttctcgaat aaaaacctta tcactcattt
     2281 ttcgtcctgt tttattttct gaatttctgt aaaatatagc acaagataaa tttaatcagg
     2341 aaaatttatg aatttaattc cctatttatt gatcttaacc gcctatttgc tcggctcgat
     2401 ttccagtgcg gtcatttttt gtaagctggc aggcttgcct gacccaagag aagtcggctc
     2461 acacaatgcc ggtgcaacga acgtactacg aattggcggt aaaagtgccg cattaggtgt
     2521 gcttttattc gatattttaa aaggcacatt accggtggcg atggggattt attttgaact
     2581 ctctccctca caactcggtt tcatcgcctt agcggtttgt cttgggcata ttttcccgat
     2641 tttcttccaa ttccgtggcg gaaaaggcgt tgccaccgca tttggtgcaa tctccgcatt
     2701 aagctttatt gttgcaggcg gtgctatcgg cacttggcta ctggtgtttt taatctccgg
     2761 ctattcttct ttaagtgccg tcttcactgc cttggtcgta ccgttttaca tttggtggtt
     2821 cgagccacaa tttactttcc ccgtcgcctt agtttgttgc ctattggttt accgccatca
     2881 cgataatatt caacgcttat ggcgtgggca ggaagacaaa ctgtgggata aattcaagaa
     2941 aaatagagca taaaaatagg catagtgaac cgttcgctat gcctatttgc aaattattgc
     3001 ggaaaaatca ccgcttgtct tctcgactaa accgctaaat ctgcttcatc tcctcgattt
     3061 tgtagccatt gtttacgatc ttccgctcgt tttttaccca atagcatatc cataatttca
     3121 aaggtattca attcgccctc ttctaccgtg tcatcaaagg ttaattgtac taagcggcga
     3181 gtgcttggct ccatcgtagt ttcacgcaac tggctcgggt tcatttcgcc taagccttta
     3241 aagcgttgca catttggctt tccttttttc ttggcaaggc gagctaaaat cgcctctttt
     3301 tccgcctcat ctaaggcata atgcacctca tctttgccga tatcaatgcg ataaagtggt
     3361 ggcattgcca cataaacgtg tccgttttgc accaatttcg ggaaatgacg aaggaataac
     3421 gcacacagca aggtggcaat atgcaaaccg tctgaatccg catcggcaag aatacaaact
     3481 ttgccataac gcaactcttc taaattatcg ctatcagggt caattcccaa ggctaccgca
     3541 atatcgtgta cttcttgtga agccaatact tggtctgatg aaacctccca agtgtttaaa
     3601 atcttaccac gcagtggcaa aatggcttga tactctttat ctcgagcttg ttttgccgaa
     3661 ccgccggcag aatcaccttc taccaagaaa agttcggtac ggctgagatc ttgagctgta
     3721 caatccgcca gtttgcccgg taaagccgga ccactcacca atttcttacg caccactttt
     3781 ttcgccgcac gcatacggct ctgggcggaa ctaattgcca tttcagcaat taatttacct
     3841 gtctgcacat tttggttaag ccataaacta aaggcatctt tcaaggtgct atccacatag
     3901 cttgaggctt gacgggaaga caaacgctct ttggtctgcc ctgcaaattg tggctcttga
     3961 attttcagag aaagcacata agcacaacgg ttccacacat catcagcggt taattttacc
     4021 cctttcggca ataaattatg gatttcgcaa aactccacca tcgcctttaa taaaccgtta
     4081 cgcaagccat taacgtgcgt gccgccttgt gcggtcggaa tcaggttcac atagctttcc
     4141 gctactaact cgcccccttc cggcaaccaa gttaatgccc agcttaccgc ctctgtttca
     4201 gcagtaacat caccaataaa cggtggattc ggcacggttt cataaccgtt taatgcctcg
     4261 ctcaaataat cagataagcc gtcttcgtaa taccaacttt cttcggtatt gttgatttta
     4321 tcaataaaat tgatggtgag tttcgggcaa agcaccgctt tggctcgtaa caaatggcgt
     4381 aaacgactca ccgaaaaacg agggctatca aaatattttg ggttcgggta aaaacgcact
     4441 gtcgtgccgg tctgtttttt cgggcaagta ccaattaccg tcagatcttc cacttttacc
     4501 ccgttggcaa aggcaatcga atagacttct ccgccacgtt taatctgaat ttcaacccgt
     4561 tcggacaggg catttaccac cgaaatcccc accccgtgca aaccaccgga aaacgtatag
     4621 tttttattgg aaaatttacc gccggcgtgc aatttcgtta agataagctc cacccctgaa
     4681 attttctcgg tggaatgaat atcgaccggc attccccgcc cgttatccac cacttccaac
     4741 gaattatcag catgaagaat cacatcaatt ttatctgcaa agccggacaa cgcctcatcg
     4801 acactattat caatcacctc ctgccccaaa tggtttggac gtgtggtatc cgtgtacatt
     4861 cccgggcgaa gctgcaccgg ctcgaggtct ttcagaacgg taatttcatc cgccccatag
     4921 cgtttttcag acattatgct ttctcttagg cttaaaataa aataaggctg aattttaagg
     4981 aatattcagc tattttgcaa aattttggtg aaaaatgacc tgttgttatg caataaaaac
     5041 tatttttgcg atctacatcg aaaaaatgag ttttaatttc cctatttgct tattcattca
     5101 gtatcttaat ctcacttttt attttaaaat ggtactatat tatggtagta aaaatcctaa
     5161 agcggaaatc tcaaaagaca ctacaacaaa tctacaccca gcctatttct gccaatatta
     5221 aatggacaaa tatagaagct ctttttctag agttaggagc agaaatagaa gaacgagaag
     5281 ggagcagaat tgcagttgtt ttatttcaac aggtcagagt atttcatcgc ccacacccga
     5341 atcctgatac agataagggg cggtagcgag tattaaaaaa tggttatctg aaaacggagt
     5401 cattccttat gcgtaatatt atggatatta atggttataa agctgtcatt gcttacgatc
     5461 ccgaaacaga attatttcga ggtgaattta tcggattaaa tggtggagcc gatttttatg
     5521 ccgataatgt cattcaatta aaaaaagaag gtgaactaag tttgaatatc tttttagaac
     5581 tttgtagaga aaaaggtatt gagccgttca aacaatattc cggaaagttt aatgttcgcc
     5641 tttcgcctga attacataaa gctgcggtaa ttgcagcaac tgctgaaaat ttaagcttaa
     5701 atgaatggat taaccaaacg ttagaaaaga gcgtgtagcc taattgcaaa acaatcacct
     5761 attttgaccg cttgtattac ccgtttaacc cattcaatat cgaacactcc gaattggcgt
     5821 tgccacagca agagctactc cagcttttga gcaaagtcag catttggttt aaatcggcaa
     5881 ttttttgttc aagctcaccg atatgctgtt cggttaattg ttttacatct cggcttgagc
     5941 ggtttgggtt gtcgtttaat ttaagtagtt cgctgatttg agccagcgaa aagcccactt
     6001 ttcgggcatt gctgataaaa tgtaatcggc tcaaatcagt agcattgtag aatcgatacc
     6061 ccgcttcggt gcgacttgtc ggcggcagaa gtcctgcttt ttcataatct cggatttgtt
     6121 tggcggaaag cccggttttt tctgcggctt ggctaatatt cattataatc ctctcacttt
     6181 aatcgcttga ccttaaccta aggttaagct ttattatacg cctgaataat cactcaaaac
     6241 aggagaaaat gatgacaatt accctacaac ttgatggctt acattgtggc aactgtgtga
     6301 aaagtgtcga aaaagcgtta aatggcgtgg ctggggtgaa ccaagttagc gtaacgttag
     6361 aaccgcaaat tgctgtggtg gaaggctcag cagaagcaca agccttaatt gaagcggttg
     6421 aagacattgg ctttgacgca aaattagcct aattaataag gggcagaaat tttgccctaa
     6481 tctgcccaat atttcggagg ataaatgaca agcacagctc actattcgcc agaacaacaa
     6541 cttttgattg atggaatgca ctgtgccgcc tgtgttcggc gagtggaaaa agccttactt
     6601 aaagtggaaa aggtggaatt tgcctcagtc aatcttgccg atcaaaccgc ttttgtgcaa
     6661 ggcaacgcca accctgaagc cttggtagca gcggtagtta aaatcggttt tggggcagaa
     6721 gtgctggaaa gcgaggaaga acgccgaatt aaacaacaag cccaaacgca acgagtgtta
     6781 gggcataaac gcactcaatt tatgcttgcc cttgtagttg gttttgcctt agttgctttt
     6841 gggttctaca aaggaatgac ggtaaacgaa accaatcgtt cgctttggct cagctgggca
     6901 ggtattagcc ttgcgacaat gtatttttca ggtaaagatt tctttcttgg ggcattttca
     6961 gcactgaaaa accgctcagc caatatggac atgttagtag caatcagcac cggcacggct
     7021 tggctctatt cttgttggct cacgcttttc ccacaaccga atgctcacgt ttattttgaa
     7081 gccagcgtga tgattctcgg ctttatcaat ctaggaaaat acttagaact gaaagccaaa
     7141 cagcgttcct cgctagcatt ggaaaaattg ctggatctcg ccccaaaaca agcggtcatt
     7201 tttgaagaaa atattgcaaa aaccattccg gctaaagcaa ttaagccaca aatgcgggtg
     7261 caagccttaa ccggtgaccg cttggcggtt gatggtattt tagacagtgg ctctatttgg
     7321 gttgatgaat caatgctcac cggtgaagcc ctacctgtag agaaaaaaat cggtgataaa
     7381 gtgcgagccg gcactctggt gcaagacggt tcaggcactt acattgccga acaggtcggc
     7441 tcacaaaccg ctttggctcg tgtaatcaat gccgttcgcc acgcccaaag cagcaaaccg
     7501 ccattggcac agtttgtaga taaaatcgcc gctgtttttg tgccggtggt ggtttcaatc
     7561 gcattacttt ctgcgttaat ttggctggca gttgggcagg attttgcctt tgcactctcg
     7621 atttttacta ccgtgttgat catcgcttgc ccttgtgcat tggggctggc aattccgctt
     7681 tctaccattg ccggcgtggc acgttctgcc gaatttggcg tgctggtgcg aaatattgag
     7741 gcactacaag caagcagtga aatcgacacc ctagtgttcg ataaaaccgg cacactcacc
     7801 actggcagaa tggaagtgtc ggatgttctc acctttaacg gatttgagca aaagcgcttg
     7861 ctacaacttg ctaaaagtgt agagcaacac gcctcacacc cgattgcgaa agcgattgca
     7921 aaatttgccg aaaatcagac cgcttgtggt gtaaccgatg tgcaagtgtt gaaagggtta
     7981 ggcatttcag caaaatatga aggcagtaca atcagaatgg gaaattggca atttgtaggc
     8041 gaaaccattc aagcaaatct tgcctcccta ttgcccgcta aagaggggga tttttcctca
     8101 aaaatttttg tttcggtgga taatcaactc gccggtgtat tgtcggtttc agaccaactt
     8161 cgccctgaag cgaaagcaac cattcatcaa ttccaagcgg aaggctatca atgcgtgatg
     8221 ctgaccggtg atcgccaaca aactgccgac tatttcgcca acgcattggg gttagacggc
     8281 gtgattgcgg aggtattacc ggagcaaaaa gcggaaaaaa ttcgagcctt gcaagcagag
     8341 ggtaaaaaag tagcaatgat tggcgacggc ataaacgatg ctccagctct ggctcaagcc
     8401 aatgtgggca ttgcgatgca caatggttca gatattgcag tggaaaccgc cgatctttcg
     8461 ctgatgcgag aagggctagc accactgatg caaattctac cgttctctaa aaaagtgctg
     8521 aaaaatatga agcaaagttt gctcggggct tttatctata atgttattgc gattcctatt
     8581 gctgccggcg tgctttaccc tttcaccggc tggctactca acccaatgat tgccgccatt
     8641 gcgatgacat tgtcgtcaat taccgtggtg ttaaatagtc aaaggttgtt gaaataattt
     8701 aagcggtcaa atttgcatat ttttttgcaa atttgaccgc ttgtaatcac taatccgcca
     8761 aaaacagcgg cccaagaggt gttttcggaa tgccaaaatg ctcagggtaa tgcacctcga
     8821 ccaaatatag cccctcggct ttcgctgtag gggcagcttt ttcccggtca cgttgctcca
     8881 acacccattt tgcccattcc acaggctgtc tgccttgccc gatttcgagc aatgttccca
     8941 caatattgcg aaccatatga tgtacaaagg cgttggcttg aatatcaaca atcacataat
     9001 tgccttgccg agacacattt aaatgatgaa tattccgcca cggcgtatta gattggcatt
     9061 tggcggcacg gaaagaggaa aagtcattct cgcccagcaa atactgccct gcttggtgca
     9121 ttttgcgttc atcaagggga aagtgaaagt gggtaacacc tttaggtaaa attgccgacc
     9181 gcagtttttg gttaaaaata atatagcggt aacggcgggc ggtggcacta aaacgggcgt
     9241 gaaaatcctc attcaccgct accgcccatt tcaccgcaat atcatcgggt aaatgagcgt
     9301 tagtgccgaa acaccagctt tgtagcgggc ggtttgcttg cgtttcaaaa tgcacgacct
     9361 gccctgtgcc gtgcacaccg gcatcggttc tgccggcaca aaacacttct acgggcgaat
     9421 tggcaacaac cgacaacgcc tgctctagct gttgttgtac actctctacc gcttcttgtc
     9481 gttgccagcc aaaataacgg ctgccgtcat attcaatacc taatgcgatt ttcattttaa
     9541 taccttgata aaaagagggg cgaaaaattt ttcgccccca cagtaattga tatttgcaat
     9601 tatttattca ataagcctaa aaattctttg cgggtttctc ggtcttctaa gaaaacaccg
     9661 ccaaaggcag aagtaactgt atagctattg gtgtctttta tgccacggca tttcacgcaa
     9721 aaatgggtgg ctttcacata caccgcaaca tcgtctgttt ctaaaatagt ttgaaaggca
     9781 gttaaaatct gttcggtaaa acgctcttgc acctgcggac gttgggcaaa aaactgcacg
     9841 acacggttga ttttcgagag tccaatcacc cattttttcg ggtaataggc taccgctact
     9901 ttgccgtcaa tagtaacaaa atgatgctca caggtagaag ttaaagtaat atcgtccacc
     9961 agcaccattt cactgacttt cattcggttt tcaatattgg taattttcgg gaaggtagca
    10021 taatcaagcc cgctgaaaat ttcatcaaca tacattttcg ccaaacgatg aggcgtttct
    10081 tctaagctgt catcacttaa atctaaaccg agcaattcta aaactgcctg catatgctgc
    10141 tggatttctg ctcggcgact ggctttatct ttggtatgag taacagtcgg agtttcaatg
    10201 ccttttgcca acaaggcttg gcgaactttt tgagcctccg gcgaaagcgt gttttctgtg
    10261 atagttaatt cgggcgagat cgttgtcatt ggttttcctc tcaaatgtaa gctgaagatt
    10321 ctaacaaatt gacatcaaaa aaaatagctc taaaatgagc tatttcagcc ataaacaccc
    10381 tctttattta tgcaaaatat acagtatctc tttaatgccg acctgattcc cgaacatcaa
    10441 gctgaatttg tgcagtctct cttaacttgc aaaaattttg acaattccga ccgcttgcta
    10501 ggcttctcaa aagggcgagg tacgacttgg tttttagata cctctgctga actaggtatc
    10561 aatgtggtgc ttcgccatta ttatcgtggc ggcttgttcg gtaaaatcat caaagatagt
    10621 tactttttta ctcgctttga ggccacccga gcgtataaag aatttttctt actgcaacaa
    10681 atgttagctt ggggtttacc tgtgcctcgc cctgtggcga ttaaaataga aagacatttt
    10741 tgttgctatc gtgccgacat tatgctcgaa aagctagaaa acacacaaga tttaagcaaa
    10801 atcttgcaat cccattcttt atcgaacgaa caatatgagc agatagggaa actgattcgc
    10861 agtctgcata accatcaaat tcaccattcc gacttaaata tccataatat tttgcttggt
    10921 aatgatggca aattttgtct gattgatttt gataaatgcg gcattgagcc gggcgaaaat
    10981 tggaagcaaa ataacctaga ccgcctgtta cgctcgttta agaaagaaca agggcgatta
    11041 aatattttct tcagcgaaga aaattggcag gctgttttga gaggatatac tctctaagaa
    11101 acaataatgg cacaagctta gaaacttgtg ccatcaaatc atcaatatta actacttcac
    11161 ttcacgaatc ataatttcag acggaatcac actgccttgc cagtaaagtt cagaagctac
    11221 tttttccgct aatgcgaggt aggcttggct gatttcgtgt tccggagctg ccaccaccgt
    11281 tggcacaccg ctatctaaat cttcacgcag acgaatatgt agtggtaatt gtgctaacac
    11341 tttagtgcca tatttttggg cgattttttc cgctccgccg gtgccgaaaa ttgcctcatg
    11401 gtgtccgcag tttgagcaga tatgcattga catattttca atcaccccaa gcactggtac
    11461 tgagactttc tcaaacattg agatcccttt aatcgcatct aataaggcaa tatcttgtgg
    11521 ggttgttact accaccgcac cggtcaccgg aatttgctgt gaaagcgtaa gctgaatatc
    11581 acccgtaccc ggtggcatat caatgaccaa gtaatccaat tcattccacc aagtttcatt
    11641 taaaagctga cttaacgcac tgcttgccat cgggccacgc caaatggtgg cgttatcttc
    11701 ttccattaaa tagccgatag aattagattg caagccgtga gcggtaatcg gcgtgatgtg
    11761 cttgttatca ggagaagttg gacgttggtc ttttgctccc aacatatgcg gaatagatgg
    11821 gccgtaaata tccgcatcta aaatccccac tcttgtccct tgtgctcgta aggctaaagc
    11881 aagattaact gaggtcgttg atttccctac cccacctttt cctgaagtga ccgcaatgat
    11941 attttttacc ccattgactg ccgggtgttt attcgcccgt tttaaggtcg caatttggta
    12001 atttaatacc cattttacac cgcttgaacc tgttacttgc tttaatttag cctctgtttc
    12061 ggcttttaag gtttcaaaac cactgttcca cgcaaatggc atcgtgattt caattctaag
    12121 aatatcgccc cctaattctg cttttttaaa cgcattaagg gcaattaaat ctttctgtaa
    12181 agtcgggtgg gaaaattgtt gcaagattgc tttaatttca acaagttgct gttcatttaa
    12241 ttggttcatt ggttatcctt gtttgctaaa ttgcgtttta aatctttgct ataaattact
    12301 tcgctatcgt tattcaaatc aatacccaaa agggaggaaa caatcccaac ccgatgatgg
    12361 tattgaaata atggcaatac ggcaacatcg ctataaagct gctcgctaat ttcttgaata
    12421 agtgactctc tcgcttctgc actaagcgtt tctgtttgta aacgatttaa tttttgatcg
    12481 actatctcac ttttatagcc ggaatgatta tccgggctca ttgaatgaaa cttctgcaaa
    12541 aatacaatcg gatcaggata atctgcacac cagcctgctc gtgctatctg gtaatctttt
    12601 tgttccctta ctttatttaa agtctgccaa tcaaccattt taggtgtaat attaaataat
    12661 tctgattgag aaagggctcg agtaacttgg ttagcaatat taatgctatt ctcatcatat
    12721 aacaaagtca gctttaaagg attataaggg ctaattcctg cttttgttaa tagctgctca
    12781 accacaacag gattccaacg cttttctcta tcttttacta agctatgtgg aattacagac
    12841 tgactcggaa ccccatattc ttgcccacta tttgctgaag ccaccattgt ccttattgct
    12901 tcacgaatct ctcgtttagc taataatgga tcatcaaaat tgaactcata gtaataagag
    12961 cacaaacgcg gaaatttcac gatattcgtt tttttattta ataaaggatt ctcgacaata
    13021 tcaaaagcag agcagttttg gatagttgta attaaatcat actctatagt ttgaaaggga
    13081 atttcttggg ttcgagcctt taacaccatt ttttgagcat ctagtttctc gagacggtaa
    13141 gacgcattgc tcacgaagtt atctatggtt ggagcaatcc cttgataagt aggtaataat
    13201 gcggaatgtg ccagcatttc aggcaattgg tgatttgggt gatttagccg aattctcaat
    13261 gtatgcgcat ttaatgcctc tacaccgagt tcttcaactg actttatttg ctcttcaatc
    13321 gcttttgcat tttctatacc catatagatg agatatttag acaatacaga atgattttga
    13381 ggatctatta aacgtcgcca gcttgctaca aaatcttgtg cagtcacagg ttggccatta
    13441 gaccacacag ctttctcatc taaaataaac aaccactctt tttcatcttc agtaaaccaa
    13501 ttctgagcaa tggccggaac gacatcacct tttctgttgt aggccgttaa accgactaat
    13561 agatctctta aaggagcagc atctgcagaa gctttaattt tatgtgggtc gagttgaaat
    13621 acagcagaat aaattgcacg tttgagtaaa gtatcactct gccggttttc tacccagaca
    13681 gattgaatgg attgagggca aattaattga tcacaagatg taataagcag aatgcaagcg
    13741 gtaacttttg caattttttt tacaaatgta accgcttgta aggatttcaa cataaactcc
    13801 ccaaaggtta attaagattt attttacaag aagcacagga aataaagttg taattcctgc
    13861 cacaataatt tcaattccca gcgccattaa aatcagcccc atgatacgag taacgacatt
    13921 agatcctgtt ttgcctaatt ttttcaccaa aggggctgaa tagcggaata aaatataaca
    13981 aattaatgca aatacaataa tcgcaatgct aaagccaaca tagtcttccc aagtatggta
    14041 gcgggttccc cacacaatgg ttgagccaat tgcccctggt cctgccataa tcggcattgc
    14101 taatggcacg acaccgatat tttcgtattc agtaatatct tcatttttct cttctttatt
    14161 ttgtttgtgt tcacctaatt taccgctaat catcgtcatc gcaatgctta caatcaaaat
    14221 gccaccagct actctaaaag agctaagtga aatgctaaac gcattgagaa tcagattacc
    14281 aaaatagagg ctgactaata aaattactcc aatagaaaca gcggtgatta agctggtgcg
    14341 atttctttcc ccctcatatt ggtgagcggt catactgaaa aaaataggca aggaaccaaa
    14401 aggattgact atagcaaata gaccaatgaa gaattggagg tagatggcaa aattaataat
    14461 gatatccaca aaaactttct caaacaacag tgtttcgggc gctattatat cggttaatca
    14521 aggtagatac aaaccaaaag cacccagcct aaaggacggt tgggtgcttt ttgataaaat
    14581 gaaaggcttg ttagtgtgac gaacgttgct gcataaaatc ttcatttacc tcaattgaag
    14641 cttttgcacg tagcgattgt aagaattcat tacgtaaaat taaacgatta gcttgttcaa
    14701 attgtggcgc caatgtctta aactgttcag cattcccttc cgtaatgtta tctaaggcaa
    14761 caataactac atcgcccttt tgattacgtg ccatttgata agtcgtttta tcttgcgcct
    14821 ttttcattgc gaaaatcgtt ccagccaata ccgggttttc tacttctgct tgcatataaa
    14881 ctaaagtttg tggcgcatta aatttcacgt ccactgattt cccttcattc aaggctttta
    14941 cattttcttc tactttcgcc agcaacgctt tttccgcttt ttctgccttc acaaaatttt
    15001 caactgctgc ttttgcttca tcaaaagttt gtggacgttc tgcatcataa tcactcactc
    15061 tcacaaacaa tgtctgtgga tttgcatcat tcccaacatc taaagcatca gaattttgtt
    15121 tattttggcg tagctctcct tcaaacaaaa cttttaatac tttctcattt tgtaaagcag
    15181 taggtacgtt ttcacgggta aacagatccg ttttttgcag ttccacatta ccggctttcg
    15241 caacttcttc aagtgaagaa ttattctcaa aggctttatt tgccatttcg cgcgcaactg
    15301 taaaatactc agttaacact aattcttggc gaatagtttg ggcaatttta tctttcactt
    15361 gtgctaactc aatcacttgc tcaggtttac gctccaatac tttgatgata tggtaagcat
    15421 tatccacttt caccgctgca ctcatctggc cggcagttaa atttgctaca gcatcttcaa
    15481 aagctttcgg gaaagtgcca gcttttgccc aacctagatc accaccatta tttgctgata
    15541 aagtatcgct agatttgttt tttgccaaag tagcaaaatc ttccccattt ttgagcgctt
    15601 gctcaatagc ctgtgcttcc gcttcactag cgacttgaat atgagctaaa tgggcttcac
    15661 ctttagttac ataatcggct ttattgcgat catagtaagt ttgaatttgc tcattggtaa
    15721 tctcaacttt gctttccaca tcttttggag aaagagtaac gtactcaacc gctaattttt
    15781 caggtgctaa taatttagtt ttatttgctt cgtaataggc tcgcaattct tgctcggaag
    15841 cggtctgatt ttccatttct tttgcaactg aaaattcggc taaacgcact tcacgttgtt
    15901 gcaacagtaa ttttgctaac aatgcctgct gtgccggtac attaaaatca ctattgataa
    15961 tcccctcttg tagctgggat tgcaacatac cttcctgcac aatcgctgca tagccatcgg
    16021 cacttaaatt attgtggcgt aatgtttgtt ggtataactc gttactgaat ttaccatctt
    16081 gttgaaacat ctggctgttt acaatttcag atttgatttg atcagcacta atacctagtt
    16141 ttaactcttt tgcatactgg cgcagaagct cttcatcaat taatccattt aataccgatt
    16201 gattaaattg agcagcatac tccgggctat ccattaaatc ccaaaagcga ctccccagtt
    16261 cagcatttaa tctattttgc tcacgattaa gcgtgttatt aaataattgc tgactaattt
    16321 cttccccatt tactttcgct acagaattat cttgtgaaat caatcctgtc ccaattccac
    16381 cgattacaaa tgaaatagag actaatgcaa aaataatttt aaagaccggc ccatttgtcc
    16441 gctcgtgcat tttttcaatc atttaaaaat tcctaaatta ctcaaaaatt gtcgctgatt
    16501 atactctttc tcaaatgaga aataaacttg caaattttta ttgaaattta accgctttct
    16561 ctttaaaatt cacagtccct gtcgtagctg agttagagat cggctattga tgtattatca
    16621 acccttaaca aaaggaaatt aaaatgtctc taagcgtaga agcaaaagca aaaatcgttg
    16681 ctgaatttgg tcgtgatgca aaagacactg gttcttctga agttcaaatt gcattattaa
    16741 ctgcacaaat caaccactta caagcacact ttgctgagca taaaaaagat caccacggtc
    16801 gtcgtggttt attacgtatg gtttcacgcc gtcgtaaatt attagactac ttaaaacgta
    16861 ctgatcttgc taaatattcg gaaactatcg cacgtttagg tttacgtcgc taatttcaaa
    16921 tattagatat gagagccgag ctgaaaagtt cggctttttt ataaatttta ttcgaggaaa
    16981 aaatatggct tttgcgtcat tatttacatt attagacgat attgctgccg tgcttgatga
    17041 tgtatcgatc atgactaaag tggctgctaa gaaaacagca ggcgtaatcg gtgatgatct
    17101 tgccttaaat gctaatcaag tcagtggaaa gaatgtggtg ccagaacgag aactaccgat
    17161 tgtttgggct gtagcgaaag gctcattaat caataaagtg atcttgattc cactagcgtt
    17221 gctgctatcg gtctttttac cgcaggctat tatcccgcta ttaatgatag gcggtgcata
    17281 tttatgtttt gaaggcgtag agaaattact ccatcgtcta ttacataaaa acaatcaagc
    17341 tcattctgat gaaaccgaaa ccctttctga aaaagataaa attaaaggtg caattcgcac
    17401 cgattttatt ctatcagcag agattatcat tattgcgtta ggtgttttgc aagactcttc
    17461 aaccctaacc caaattttat ctctctccgc tatcggggtc ggaattaccc tgtttgttta
    17521 tggcttagtt ggattaattg taaaactaga tgatatcggt ttatggttaa tgcagaaaaa
    17581 aagcacattc tcacaagcgg ttggaaaagg cttattattt gcaatgccgt ggtttatgaa
    17641 aggactttct gtgattggta ctattgcgat gttcttagtc ggtggtggta tttttaccca
    17701 taatttacca atgattcatc acttcgtaga acaattcggt atctctcccc atttttctac
    17761 tctggttgat tttgcagtgg gtattgtggt tggtattatt gcatgcttaa ttattttacc
    17821 tttgatgaaa ttattttcta aaaaggcgca ctaatcccca aaagcgtagc tttggttaaa
    17881 gctagctttt tatctcttgc tataaaaaaa tagcaggttt caagcctgct atttttttaa
    17941 ttattataat gagttagact cagtggctgt ttgcggtaag gctaatggct cattaacttt
    18001 agactgagta gccatattca cctgtttgag attttcctca cgaatacggt ttgccattaa
    18061 tgtatccccc atctgctctg ccacgtgcag tgccataata cgatcatcag caacacattc
    18121 atcatgagcc aataacaatt caaactgaga cttcgctttt tggtattgcc catctcgtgt
    18181 ataaatatag ccaagcgctc tagcataatc atcggtatat ttaacattcg ctttatctgc
    18241 ccgttttgct aatactttta gtagcttact gtcagaatca atttgtaaac gggttaattg
    18301 cacaaataaa ccttgtaatt gctcatcttc aaatttcttc aacgtttcta aagcaatttc
    18361 ttgtgcagat tgatgatcgt cactatcaat taaacgcttg atgacaccga cacgactata
    18421 caccgattta cgacgacgat ttggttggtt ttcccaccaa gaaagcaagc cttcctgccc
    18481 ttcttcctgt aaacgctcat cttgtaaacc atcatcaacg aaatactcta actcagcata
    18541 ctcttctgca gttaagaaat tacgttggcc gatttcaact aataatctat ctaacgcaac
    18601 ataagctctg gattctttat aaatttgaat cgctaagcgt aatacctcat cgctatgagg
    18661 tgcaagctct agtaggctat caatcgcagt tcgggcagcc ggtaattttc cttgttgtaa
    18721 taaaattcgg gttcgtacca actccactgc aacattattc ggtccagcta tttcagttgc
    18781 cttaattaaa tatttatttg cagctaaatc atcaccattt tgctgagcag cttccgccgc
    18841 tttaattaaa ttcagtacag gctcatctgc atgttttgca tttttactaa agagtttttc
    18901 cgcttttgag taattccctt cactcatacg cattaaacct tccagtgttt cttgctgagc
    18961 ttttttatgc ttacgagttg agaaccagtt ataagctcca ttactcatac ggcatatttt
    19021 agtgacaatc cattcaagta aataaactac cgccattgcc aacacaaaaa aaaccacaag
    19081 cattacaatg ctcatttcaa tcacggtagt tgctgtttca attctgacat aaccttgatt
    19141 tccggctaaa taaggcccag agattagtcc aactaataat aaaagcatca aaaagagcgt
    19201 tctaaacata atctattctc ctttttatta ttgtgctgaa agaggcatcg catcttgctc
    19261 tgcttttaca ggctctgctt gctctaattc tttttcagct tttatttcga ctttctctat
    19321 tttttcaggg gttttattaa gttgctgagc aatcaccttt aagctttgta atgaagttgg
    19381 agcatccaca taaatagttt gttctgccaa ctcatctagc tctttcaaga aatgttgcac
    19441 attttcattt gaagtttcaa aataacttct tacccaagag cctaccgttt gtaacgattt
    19501 tttataaagt tcgctttgct ggcgaggaac agctaaaatc gcaatttgta aacgcaagcg
    19561 aatgttttca cgcaaataaa tttcttgatt cggtgcaaca aaggctttct catctgctgc
    19621 attacgtttc gatacacgaa taaaatgatc taaaaatgaa gcagcacttt tttctaaatt
    19681 tttctcccaa tccgcaagag aatcacttac ttgcccatct tgtttgctat ttgaagcttg
    19741 ttcactttcc aaaatcggca aatcatctaa tttattcgct aaatttgcga cacgctgcat
    19801 taaggcattt tgatcgatct gatgcaatgc ggttaatgta tttaaatcag ttttgattgc
    19861 ctcacgaatg tgaatcgtat tcggtgcttt tgataaaact tgatctgcct ctaacaataa
    19921 atttttcgct gtttcaatgt cattatctaa caccacttta cgagccgcat tattcaatag
    19981 gaaatctgcc tcagataata gccagaatgt gttatccgaa ccagaggtat tatttagctt
    20041 ttgcagttga agctgcaaac tactaatttg ctgggtataa ccattttggg ctgtttctaa
    20101 agctttaatc cgttctaaag ctttttgata ttccgtgacc aattcggcaa tttgtgcttt
    20161 ttcattttcg aaatttggca tctcaaccat agtttgagta gtaggctgat ttgctttagc
    20221 agatactgcc tgaatttgag attcaacctc tgcaaacttt ttatttgcca tataatgacc
    20281 agctccgcca accgctaaag ccactaatag tgcaactaat gccaagccct ttccgcccga
    20341 tttttgaaca accacttgtt cttttggcgc tttttgcatt tctgtttgaa tatctttctc
    20401 tatagcttcg ttcactacat cttcctcaat ctcttttttt gcaaaagatc ccgctgaatc
    20461 gaccgcttgt tgtgcctctt ctaccacctt ttcagctgaa tgctctaaat gttcagttac
    20521 ttttttagat cttgacatac tcgccacctc tagttagatt tgcccacttt aaataataat
    20581 gtattcatca aagttacatt atcggcttta tccgataccc taatcttatc ttcttgccag
    20641 cccatttgtt tagctatctt tgcaatccgc cggctcacta caaccagatc acattcaaat
    20701 aaccatgctc tacaatctgc tttcgcttgt tcataaagtg atcttaaaat ttcactactg
    20761 gtgatcacaa tagtatctac tcccaagcgt ttacataagc tgattttttc gggaatatca
    20821 tcggtaaccg gctctctacg ataacactcc aaatattgaa tagttgcccc acgcaagact
    20881 gcagtttcag caagtagctc acgcccagaa tcggctctta gaattaaaat agttttatca
    20941 gttagattct gcatttcagg taatgccaaa accccctcgc tattttcaaa ttctatcgga
    21001 taaatgaccg cttgttcagc tttttctgtt aaatatttcg cagtccgttg ccctaccgca
    21061 aaatatttca aatctgaacg aaaatggaac ccggtatcta ctaatgtttt tgcagcatag
    21121 tccactgcat tcggcgaaac aacaaataca taatcgtctg attttagccg agaaatagcc
    21181 gaaggaagca aaggtaattc tttaccggct tcaatcgtaa atagcggttg atgaatagca
    21241 aaaatttgct gttcattcaa catatctacc aattcttgcc cccgactatc caggcgtgtg
    21301 accaacacat tcattattgt acgttttcgt tataaaccgc agctaaaatt ttatctgcac
    21361 cttgagcaag caactgttcc gccaccaaaa tgcctaattg ctccgcctct tgcttatgtc
    21421 cttttgccga agcccgaata atttgtgagc catctaacga tccaactaac gcattaagcg
    21481 ttaattcatc gccctctaat gtagcataac caccaatcgg cacttggcaa ccgccttgca
    21541 aacgggtatt cattgcacgt tctgccatca cgcaacaagc ggtcgaacta tggtttaatt
    21601 ttgcaatgta gttcaaaatc cgttcatcat tggctcgagt ctcaatccct actgctcctt
    21661 gaccagctgc gggtaatgat tgttccacag aaatatagct acggattcgc tcttgcaagc
    21721 ctaaacgaat taagccggca gaggctaaaa taatcgcatc atactcgcca ttatctaatt
    21781 tgcttaagcg agtgccgaca ttgcctcgca atgatttaac ctctaaatgc ggatatttcg
    21841 ccattaattg gcactgacgg cgtaagctcg atgtaccgac cacagcacct ttcggcaaat
    21901 cttctaacga atggtagttg ttcgacacaa acgcatcacg gggatcttca cgttcacaaa
    21961 tcaccgcaag ccccaagcct tcgggaaagc tcatcggcac atctttcatt gaatgcaccg
    22021 caatatcagc tcgattttct aaaagggcta attctaactc tttcacaaac aagccttttc
    22081 cgccaatttt ggctaatggg gtgtctaaaa taatatcgcc tttcgttacc atcgtaacca
    22141 gttcgacaga taattgcgga aaatgttttt ctaattcgct ttttacaaaa tttgcctgcc
    22201 ataaggctaa cgggctttga cgggttgcaa tgcgtaaaat atctttcata aattctaaaa
    22261 ttaaaacatt gagttaatga attatcctac cactttttag ctgaactgcc aaaaataatc
    22321 gtggatttcg ctttgcattt aatcaaaaat ccgacttttt ctcaaaatgt atcaatgtct
    22381 atatgactaa atattttata gcatatatac aacgttaaaa aagttgatat agatcaaagc
    22441 aaacataaaa cattattaat ttttaacgac aaaataactc ttttgggtaa taatttcatc
    22501 agttaaaaaa attatcaaat ttaaatttta tgaggaacca aactatggct aaaaatacgc
    22561 aaccatttga tgcccaagca gaagtgaatg agcttgttga aaaaggctta aaagcccttg
    22621 atgagtttag aaaactcaac caagaacaag tggattttat tgtcgctaaa gcctctgttg
    22681 ctgcccttga taaacacggt attttagcaa tgcacgctta cgaagaaacc ggacggggtg
    22741 tgtttgaaga caaagccact aaaaacctgt tcgcctgtga gtatgttgtc aataatatgc
    22801 gacatttgaa aaccgcaggg gtcattagtg aagatgatgt caccggtatt accgaaattg
    22861 ccgaccctgt cggtgttgtc tgcggtatca ccccaaccac caacccaacc tcaaccacca
    22921 ttttcaaagc gttaatcgcc cttaaaaccc gtaaccctat cgtttttgct ttccacccgt
    22981 ctgctcaaca atcttctgcc cacgctgctc aaattgtgcg tgatgctgcc gtggctgccg
    23041 gtgcaccgga aaactgtatt caatggatta cccagccttc aatggaaggt acatctgctt
    23101 taatgaaaca cccgggcatt gcaactattt tagccaccgg cggtaatgca atggttgaag
    23161 ccgcttactc ttgcggcaaa ccggcattag gagttggtgc aggcaacgta ccggcttatg
    23221 tagaaaaaac cgctaaatta aaacaagcgg tgtatgacat tgtaatgtca aaatctttcg
    23281 acaacggtat gatttgtgcc tctgaacaag cggcgattgt agataaagaa atttacgctg
    23341 agtttattaa agagatgcaa tcttacggcg tctatttagt gaacaaaaaa gagaaagcct
    23401 tattggaaaa atacattttc ggtattgata aagccaaaga tgaaaactgc tcaggtgcaa
    23461 aactcaattc agcggtggtt ggcaaaccgg ctgcgtggat tgcagaacaa gccggcttta
    23521 aagtaccgga aaaaaccaat attctgttag ccgaatgtgc ctttgtgggc gaagctgagc
    23581 cacttacccg tgaaaaactt tcgcctgtac tggctctgtt aaaatccgac tccaccgaac
    23641 acggtttgga attgtctgaa gcgatggtga atttccacgg tttagggcat agtgccgcca
    23701 ttcataccga aaacaaagcc ttagccaaaa cctttggcga acgggtaaaa gccattcggg
    23761 tgatttggaa ctcaccatca acctttggcg gtatcggtga tgtatataac tccttcctgc
    23821 catcgcttac gctgggctgt ggttcctacg gtaaaaactc tgtaggtaac aacgttagtg
    23881 cggtgaattt aatcaatatc aaacgtgtgg gcagacggag aaataatatg caatggttta
    23941 aagtgccatc aaaaatctac tttgagcgtg actcaattca atatttgaaa tcaatgcacg
    24001 atgtgcataa agtaatgatc gtaaccgacc gctcaatggt tgatctcggc tttgtggata
    24061 gaattaccga acaacttcgc caacgtcgca accaagtgat gattcagttc tttaccgatg
    24121 ttgaaccaaa cccaagcctg caaaccgtac aacgtggtac agaattaatg cgtagcttcc
    24181 agcctgatac tatcatcgca cttggtggtg gttcaccaat ggatgcagcc aaaattatgt
    24241 ggttattcta cgaacaaccg gaagtcgatt tccgtgattt agtgcaaaaa tttatggata
    24301 tccgcaaacg tgcattcaaa ttcccacaat taggcagaaa agcgaaattt gtcggcattc
    24361 caaccacctc cggaacaggc tctgaagtca caccgtttgc agtaattacc gatggcgata
    24421 ttaaatatcc gctcgctgac tactcgctta ccccaaccat tgcgattgtc gatcctgcgt
    24481 tagtaatgtc tgtgccgtct cacgttgctg ccgacaccgg tttagacgta ttaactcacg
    24541 ctaccgaggc ttacacatcg attttagcca acgactatac cgacggctta gccttgcaag
    24601 ccattaagtt agtgtttgaa aacttggaaa aatcggtcaa agagtttgat gaaaccgccc
    24661 gtgaaaaaat gcacaatgct tccacaatgg cagggatggc atttgccaat gccttcttag
    24721 gtatttgcca ctcaatggca cacaaaatcg ggggtaaatt ccacaccatc cacggtcgaa
    24781 ccaatgcgat tttactgcca cacgttattc gctataacgg cacacgccca accaaagtgg
    24841 caacttggcc aaaatacacc aattatgtcg cagatgtgcg tttccaagat attgccagaa
    24901 tgcttggctt accggcagaa accccggaac aagcggtgga agcttacgcc caagcggtac
    24961 acgatttagc cgttcgttgc ggcgtgaaaa tgtcgcttcg tgagcaaggc gttgatgagc
    25021 aagccttctt gaatgcccgc cgtgaacttg ccctacacgc atttgaagac caatgcacac
    25081 cagcaaaccc acgtttggca atgattgaag atatggaagc gattatgact aaagcctact
    25141 atggcaagga ataaagcaca atttaatcgt taaacttact aaatggccgc ttgcaagcgg
    25201 tcatttttct tgaaattttt acttttccct tcacaaaata ctttcgctct tttacaaagc
    25261 atagtatttt tatcgctcct tttatcttac aggaaatact atgcaaatta cgattttaga
    25321 cggcggaatt agccgtgaat taatgcgtcg caatgctcca tttcatcagc ctgaatggtc
    25381 tgctgccgct ttgtatgaag gcccacattt tgtgcaagcg gtacacgaag attttatcgc
    25441 tcacggggca gaagtgatta ctaccgacag ctatgcggtt gtgccgtttc acattggcga
    25501 aaaacgcttt gcggcagacg gcaaaatgct tgccgattta gccggtcgcc ttgccaaaca
    25561 agcggtcaaa aattcaggaa atattgcaac tcaaattgca ggctcacttc caccaatgtt
    25621 tggctcttac cgtgccgatt taattcaaat ggaacgcttt gctgaagtcg ctcagccttt
    25681 aattgacggg ctttcgcctt atgtggatat ttggctttgc gaaacccaaa gtgcgattat
    25741 tgagccgatt tccatcaaag cattattgcc gaaagacaac cgcccgcttt gggtctcttt
    25801 taccctcacc gatgatgaac caaccaccga gccacaactt cgctcgggcg aaagcgttaa
    25861 acaagcagtc gaagaaatgg tgaagttagg cgtgcaagcg attttattta actgctgtca
    25921 gcctgaagtg atcggcgagg cattaagtgt aacccaaaaa actttagccg aattaaaagc
    25981 tacccatatt cgcacaggag cttatgccaa cgcctttgct ccacaaccaa aagatgccac
    26041 cgccaatgac ggtttagatg aagttcgcca agatttaacc ctggaggctt atttaggctg
    26101 ggcaaaaaaa tggacggaac aaggggcaac tattatcggt ggctgctgcg gcattggggt
    26161 tgagtatatt gaaacgctgg caaaaaattt aaaataagga aatcgaatgt caaataaaaa
    26221 aataggatta atttcactca ccgccttagt gctaagctca atgattggct cggggatttt
    26281 cagcttaccg caaaatatgg cagccgttgc cggagcagaa gccattacca ttggctggct
    26341 gattaccggt gtcggcatta tctttttagg tttatcgttt ttctttattt cccgcttgcg
    26401 tccggattta gacggtggca tttacaccta cgcacgggag ggttttggcg agctgatggg
    26461 ctttatgtca gcgtggggct attggctctg tgccaccatt gggattgtag gatacctcac
    26521 cgttgctttt gaaggtttgg gtgtatttac cgacaacccg aacaccgtga ttttcgggca
    26581 aggtaacacc ctcgcctctt ttattggatc ttcaatcatt gtgtggctgg ttcacgccct
    26641 catcgcaggc ggtatcaaag aagctgcctt tgtaaactta attgccactt ttgtgaaagt
    26701 cgctccgctc attctgttta tcgggttagg catttggtat ttcgatgtgg atctgtttaa
    26761 tagcgatgtt aaagccaccg cacttaataa tagtgtaagc gaccaagtga aaagcacaat
    26821 gttaatcacc ttatgggtat ttaccggtgt ggaaggggct tctgtgctgt cggctcacgc
    26881 gaaaaagcgt tctgacgtgg gactggcaac cgtattaggt attattattg cacttgctct
    26941 ttatgtggca attaccattc tttcactcgg aattctgcca cgggaaacta ttgccaatat
    27001 ggcaaatccg tcaatggggc cgttgctcga tgcaatgatg ggcccaaccg gcaaagtgat
    27061 tattactgct tgtttaattg tatcggtgct tgcctcttac attagctgga cgatgtattc
    27121 ggcagaagtg ccttatcgtg gctcaaaaaa cggggctttc ccgaaaattt tagacaaagt
    27181 gaataaaaac ggcacgccga ttaactcact ctggtttacc ggctttatcg tgcaattttg
    27241 cttggtgttg gtgtttgttt ttgagcaaag ctataacacc ttattgctga tttccacctc
    27301 gatgatttta attccctatt tcttaatcgg ggcttattta ttcaaattag cgattcaaac
    27361 caacgccact tggtacatta aactcaccgg ctttatggca gccctttacg gattatggat
    27421 tgtctatgcc gcaggactag aatatttgct gctttcggtg gtgctttatg tacccggaat
    27481 tttactcttc ctctactcca actataaatt caacggcaga ttaacccttt caaccgctga
    27541 aaaggtcatc ttaatcgtgc tactggtaat ttttggctat gccgtgattg agctgccagc
    27601 actattagca gcataattcc catcaaaaat gaccgcttgc aagcggttat ttttctagga
    27661 tcttctgcaa agattcatta gaatagaaac aacgtcaata ataaataaaa agaggagaaa
    27721 caatgcaaac ttatcaacat aaagcccttt gtcgggtaag aaccattacc ctttttctga
    27781 gtttaaccaa agataaattg cagtgggaaa cggcattaaa tgcggcaaaa gcagaatttg
    27841 atctattagt tcccgctatt caaacacaag gctatcacat acaatcgatt cgaatcgtta
    27901 ccaacagttt cggggaatat cttgatctca ctaatattga aacagcgaaa caggatttag
    27961 cctatcttaa acagctatta acccaactta acgatagcgg tttacgcatt cgctttgcca
    28021 ttggtgaggc aaaaacaccc cacgaattag cattactacc tgagctgatt ttaaattatg
    28081 gtgatttatc taacgcttgt gtcaatattg aacccgatga atttgggatt ttagacaatg
    28141 aaaccatttt acaatctgct caaattatca aacaaatcgc tgaaattacc ccaagaggtg
    28201 aaggcaattt taattttacg gtgaatttta actgtaaacc ttttattcct tattttccgg
    28261 caagctacca ttcaagcaag ctccctaaca gttttgtgat aggcctagaa acaccagatc
    28321 tattagtagc ggtgttaaaa gagctgaaag ccagcccaca taacgacttt tatcgccaat
    28381 gctatgaaac gatgtctcaa gccttgcaat atcacgttga tgaagttctc gaagcagtaa
    28441 aatcggtaca acacaaatta caatttgcct ttgctggcat tgatagttct gctgctccgt
    28501 caaaaaactg tgcctcaatg acagaagttt atgaattaat gggcgtacca ttttttgggg
    28561 cagccggaac agtagaagcc tcttcacttc tgacaaaagt ctttaaatct atcaaacatg
    28621 taccgcttgt cggtttttca ggtttaatgt tggcagtaac cgaagattta ggcttagccg
    28681 caggcacaca caaagcccaa ttcgacattc gtgctttact aacttatagt gctgtttgtg
    28741 gcattgggtt agataccgta ccgatttcca atgaagccac tgttgaacaa attgccgcat
    28801 taatgcgaga caccggcaca atggcattta gactaaataa accgcttaca gtacgtttat
    28861 ttccaattcc gaataagagt gctggggaag tgacagaatt tgaaagtgat gatttatgta
    28921 actgccgaat tttagctgta ccttaaaata aaggctgatg gatatttcca tcagcctttc
    28981 aatttacttc accttcaatt ttttacctac cgtgatctga taatttttca aattattcag
    29041 ctcactgatt ttttgcggcg tagtaccgta agctctagca atcgagtaaa ccgtttcatc
    29101 ttgttggaca atatggtagc cactgttaga caccttaatt tctctttgag agtctgattt
    29161 tttagactga tttttttgat ctttctcaag agctgttttt tcttttagtt gctgctcttt
    29221 tttcttattg gttttagccg aatcttcttt tttatcctct tttttgctct tttctttcaa
    29281 ttttgtctta tctgattgcg tattcttctc ttgtttctca gaagcaggct ttttagttaa
    29341 atcagcttta gcagtttttt cctctttctt attttgctta tcttctttgt ccgatttttt
    29401 actgaccgaa gaactagcaa ctgcattttt tgcccgataa gcgactaatc cattataaat
    29461 ggcccgagca acttgtttac gataatttgc actggctagc tttgcttcct cggttgaatt
    29521 agataaaaat cccgtttcca ccaatacaga tggaatatca ggtgaacgca gaacacttaa
    29581 gcttgcgtgc tgaggagacg attttgctaa tgcagccaca tttgacattt tagctaaaat
    29641 gctcttgcct aattcatagc cggcacgttg agagtgagag aactgtaaat caagcactgt
    29701 ttgatttaaa taacgttcat tgttgcttga aagcaccgaa ccagccccgc caagtaattc
    29761 cgactgcttc tcgtggtctt ccaaccattt acccatttca tcgctagcac ggctattaga
    29821 aagtacccaa accgaagccc ctttcaagga atcgccacga ggcgaagagt ctgcgtgaat
    29881 agaaaccagc agatcggcac gatgcttacg ggcaatctcg gtacgttgcg gtaattggat
    29941 aaaataatct cccgagcgtg tcatcactgc tttaaaatta ggatcggcat ctaacaaggc
    30001 ttttagctct ttagaaattg cgagggtaac gcttttttcc aaaatcccca gatttttacc
    30061 aatagccccc ggatcttttc ccccgtgtcc ggcatcaatc gccacaatgg ttttggcaaa
    30121 tgtggaaaaa ctgaataaac tcaatgtgct aaaaacaata aatctgataa cttgcttcat
    30181 taccttccct acaagcggtc tatttttgat gaaaatttac taatatatct actgcagttt
    30241 gattttgcgg caacaggcta atctgccgtc cgtcattctt ataatcaatt tggatcacaa
    30301 aatcagcctc tggaatcatt cctttacctt taactgccca ttcaagcaaa caaagcgttt
    30361 gtggtttgaa ataatcacga attcccataa actccagctc ttcaggatcg gctaagcgat
    30421 acaaatcaaa atggtaaagg ctgaaaggcg gaagttggta ttcttccacc agagtataag
    30481 ttgggctttt tacattgcct tgatgcccga aagcccgtac gatcgagcgg gttaaggtgg
    30541 ttttacctgc cccaagttcg ccgtttaggt aaacaaccag cgaatgagct tggtcttgca
    30601 ataaatattt cttaagttct aacgcgaatg attgaccaaa ttccagcaat ttagtttcat
    30661 cttcgcagta aaaagagaga gaatctgtca ttatttttgg tctagctgaa taaaatgttc
    30721 ccgataaaat ttcaattcgt taatggattc acgaatatcg tccaacgcta aatgcgtatt
    30781 gcctttactg aatttatcta aaatctccgg tttccaacgg cgtgccagct cttttaaagt
    30841 actcacatct aagtggcgat aatggaaata atcggctaaa tcaggcatat atttatacaa
    30901 aaaacgttta tcttgagcaa tgctgttgcc gcaaatcgga gaagcgcctt ttggcaccca
    30961 gcgttttaag aagtctaaag tttgcaactc tgctgcccgt tcagtcaatt tgctcgcttt
    31021 cactcgttca atcagcccgt tagcggtatg ggttttgacg caccaatcac tcattttctc
    31081 taataaatca tcggtttggt gtaccgcaag taccggtcct tccgctaaaa tatttaaatc
    31141 cttatcggtc acaatggtgg cgatttcaat aatgcgttct ttttccggat ctaaccctgt
    31201 catttcaaga tcgatccaaa ttaaattttg ttcgttttga gccattttat ttccttacac
    31261 ttttgcaatt tttagggcat ttttgaccgc ttgcggcaca aattggctga tgtcaccatt
    31321 gtggcgatag atttccctta ccatcgttga agaaaggtaa cgccattcta ttgaaggggg
    31381 aaaaaaaata gtttctaaat cgcccgataa tttgtaattt aactgagcga gttggatttc
    31441 atagtcaata tcatctgccc cacgaatacc acggattaac gctttggcat tctgctgttt
    31501 ggcaaagtct gctaacaatc cactaaagcc aatcacctca atattttgcc actgggtaca
    31561 gctttgttta acaagctcca ctcgttcttc aagactaaaa agcggctgct tgcttgggtt
    31621 ttgagcaacg gcaacaatca cttttccaaa taagtgagag gctttgcaaa ttatgtccaa
    31681 atgcccattg gtaatgggat caaaggtgcc tgcataaatt acgttataac tcattttatt
    31741 tctctaaata ggaggctaat aaatccaaat ggcgttttaa tgccccttga ttttcctgta
    31801 acacgcttaa gccggatttt gcaatttctt gtccgatttg gggctgctta agcaataatt
    31861 gaatgctctc ggtcaaagcc tcgactgaac tttcaatttc aatcacgcct ttcacctcac
    31921 gcaatttctc aaagatttca gggaaattat aggtgtaaag cccagaaacc accggaatat
    31981 taaaagcgat tggttcaagt ggattatgcc caccgtgttt gaccaaactg cctcctacaa
    32041 aagcaatgtc agacaaccca tacagtaaca tcatttcccc cattgtatca cctaacatta
    32101 cttgagtatt ttggcttaac gttttattct cagtacgttt tacataattt aaatctgatt
    32161 tttgaatcag tagctcaact aaaccaaaac gctccggatg gcgaggcact aaaatcaaca
    32221 ctaaattcgg gtaatgctct aataagagtt tatgagcatc taaaatcagc ttctcttccc
    32281 cttcgtgagt actgccggca atccaaatcg gtctctctgt taaattcaga ctagctttag
    32341 ttttaatcac cgattgatga agctgtggcg taatttctaa atcaaatttc aggttaccgg
    32401 tattaaccat ttttgccggt gcataaccga gtgctaaata gcgatctcgg cttacctcat
    32461 cttgagccat aatcagacta atttggttga gcatatcctt aatgctacct tttacccagc
    32521 cataacgctt cgcagaacgt ggcgataagc gggcattggc aatcacaaat ggaattttac
    32581 gaatatttac tttacgaatt aaattcggcc aaagttcggt ttcaattaca atcatcaatt
    32641 tcggatcgat aaaattcaaa aaccgctcga tagcatcagg taagtcataa ggcaaataaa
    32701 aatgtgaaac actattacca aaagcagctt gcacacgccc agagcctgtt ggcgttaccg
    32761 ttgtgactat caacggaagt tcaggatatt gcttgctgac tgccttaatc aaaagcgttg
    32821 cagcaatcac ctcaccaacc gatgccgcat ggattaccac cccttttgct ttcggttttt
    32881 ccgattcgtc ataaatccca taacgctccc ataaacgttt ccgataagcc ggttgtttac
    32941 gccctttgta ccacattaat agcagaacca caggctgtaa tagataactt aaacaaatat
    33001 agagtaaacg tagcatttat tttccttata ccataaccct cacctcttgt gggagagagt
    33061 caaatacgcc aataaatcgt tcctctcttg ttcgagaggg gggaacaagc ggttattttt
    33121 accaaaaatt ttgcaatcta tatcctcaaa gacaaaacca cggaataacc ttaatccgtg
    33181 gtttatctcg catcattacg cttgatgtgg attgcgggta ttcgtattca ctaagttacg
    33241 cattaaaagt gcaaaatcca actcaatatc tgccggcaca tctaaaaaga caaaatgccc
    33301 gtcaccgagt gctgcgtcca cattttcatt tttgcggtta agcatacgct cgattttaaa
    33361 tacaatgttg cctttagggg tcatcatttc cactgaatcg cccactaaga atttgttttt
    33421 cactgccact tccgccaagc cttctgcatt gcgtttgccg gtaaattcgc ccacaaattg
    33481 ttggcgttct gaaatcgaat agccatattc atagttttgg tattcatcgt gagtatgacg
    33541 acgtaagaag ccctctgtat aaccacggtg tgcaaggctt tcaagagtat ccattaaact
    33601 ttcgtcaaac ggtttaccgg cagcggcatc atcaatcgcc ttacgataca cctgagccgt
    33661 tctcgcacag taatagaacg atttcgtacg cccctcaatt ttcagtgaat gcacccccat
    33721 ttgagttaaa cgctcaacgt gttgtactgc acgcagatct ttagagttca taaaataggt
    33781 gccgtgttca tcttcaaagg cggtcatttg ctcatcaggg cgttgtgatt ctgtataaag
    33841 gaacacttta tctgttgctt cgccattacc tagagtagga gccacatttt tgacttcaat
    33901 ttccggctca tacttaggca caatttgccc tacctcatca atcttacctt cttccatttt
    33961 atattcccaa cggcaagcat tggtgcaagt gccttggttt gggtcacgct tattgatata
    34021 gcctgaaagc aagcagcgac ctgaatatgc catacacaaa gcaccgtgaa cgaagatctc
    34081 aagctccata tccggcactt gttcacgaat ttcttcgatc tcttcgagtg ataattcacg
    34141 ggataaaatc acacgggtta gccccatttg acgccagaat ttcaccgttg cccagtttac
    34201 cgcattggct tgcaccgaaa gatgaatatc catttcaggg aaattttcac gcaccaacat
    34261 aattaagccc ggatcagaca taatcaaagc gtccggcttc atatccacta ccacttttag
    34321 atctttgatg aaggttttta attttgagtt gtgtggcgca atgtttacca ccacatagaa
    34381 tttttttcct aaggcgtggg cttcatcaat cgcaactttt aaattggcgt ggttaaattc
    34441 attattacgc acacgcaagc tataacgggg ctgtcctgca taaatcgcat cggcaccata
    34501 agcaaaagcg taacgcatat tttttaaaga acctgcaggc gaaagtagct caggtttggc
    34561 atattttaaa gtcatattat tctcttttct gataacaagt caggacttct cgacgtgaga
    34621 agcgtaagcg gtatattttc taagaaatat tgcgtgatgg caagctaatc cattacaatc
    34681 cgatttttat gtggggaaca atatgaaact taaatacctt ttagcaacaa cattactggc
    34741 tttttcaaca tttaccgccg ctcaaagcat caagacggag atgatgcaaa tgaatatgca
    34801 agcgaataaa ttgatgcgtg ccgaatcggc agaagagttt agcgaaattg cgaatgattt
    34861 cattataatt accgagaaaa ccaaagggat ttttcccaat agcgtagaag gcgataaagc
    34921 agctcaggaa gattaccaag ccggtatgca aaaattaatt gatatggtta atcaagccag
    34981 tgagaaagct caagcaggtg aattgcaaga agcaaaaatg ctgatttccg agcttgaaat
    35041 gatcaagcgt gaatatcaca aaaaatacaa ataattcaac acattaaaag ggtgagctaa
    35101 agctcaccct ttctattcaa attccagttc aaccgaattc tcaccaagaa gtgcctttaa
    35161 ttcgctaaac attgcctcat tcgggctgat tcgccactct actccgcctt tgagcaatac
    35221 cctaccttcc gggctttggt aataaaaatg cagcggtaaa gtgccttctt tatgtggggt
    35281 gatgatagcg gtcatttttt taataaaatc tgcagaaagt tgctctttgc taatcgctaa
    35341 cgctaaactt ttggcaaatc gaccccttgc ttcatcaagg gataacactt ctcgagccga
    35401 cattttcagt ccaccgctga aatcatcaaa ctgtaccgaa cctgttgcca caataatttg
    35461 gtcttgttgc atcaaatgcc cgaaattttc taaggcttcc gagaaaaggg taatgtccaa
    35521 tttccccgag cgatcttcaa tagtcgcaat cccaatacgg cttcctcgct tggtaactgc
    35581 cactcgagat gccataacaa ttcctgaaac cgtggtcatt tgccctcgga aagtcggttg
    35641 caattcattc agccgattag gggcatagtg ggataattct ttgaggaatc taccaatcgg
    35701 gtgtccgctt aaatacagcc cgagcgtggc acgctctcca tctaaaatca cttgctccga
    35761 ccattttggc gtattggcgt aagcattttg cacttcttcc ggtgtctcgg taagcacgcc
    35821 aaacatatcg ctctgcccga gttcctccat tttagcgtgc tgatctgagg ctttaagtgc
    35881 atcttccaaa ttcttcatca aggcagctcg gtgagggcct aatttgtcaa aagcaccgga
    35941 cataatcagg ctttcaaagg tgcggcggtt gatttttttc agatcgaccc gagcggttaa
    36001 atcaaataga tctttaaatt tcccctcttt ttggcgagct gccagaattg cctcaatcgg
    36061 tccttcccca acgcctttaa ttgctcctag cccgtaaaca atttcgcctt tttcatttac
    36121 gctaaaacga tgtttaccgc tgtttacatc aggcggcaca acggttaagc ccatattcat
    36181 acactcatcg tagaacccga caattttatc ggtattatcc atctctgagg tcattaccgc
    36241 agccataaat tctgccggat aatgggcttt tagccaaagt gtttggtaag aaaccaacgc
    36301 ataagctgct gagtgagatt tattaaagcc gtagccggca aacttttcta ccaagtcaaa
    36361 aatttgaccg gcaagtttac cgtcaatccc tttggcttcc gccccttttt caaacacttc
    36421 acgctgtgca gccatttcct ccggtttctt cttacccatt gcacggcgga gtaagtccgc
    36481 tccaccgagt gtataaccgg caagctcttg tgcaatttgc ataacctgtt cttggtaaac
    36541 aatgacccca taagtcggct cgagaatagg ttttaagcat tcgtgttggt attgcggatc
    36601 aggataagaa acctcttctt tgccgtgttt acggtcaata aagttctgca ccatacctga
    36661 ttccagcggc cctgggcgga atagtgccac caatgcgata atatcttcaa aacagtccgg
    36721 cttcaggcga gaaattaagt ctttcattcc ccgtgattca agctggaata ctgctgtagt
    36781 tttagctgcc agcaacagag caaaggattt tttatcatca agcggaatgg tttcaatccg
    36841 aatcggctct ttgccttcac gagccaaacg ttcgttaatc atctccaacg cccatttgat
    36901 gatggtgagc gtacgcaagc ctaagaagtc aaacttcacc aatcctgcat attccacgtc
    36961 atttttatca aaatgggtaa ccgggtgtaa gccctcgcta tcgcaataaa gcggcgaaaa
    37021 atcggtaatc gcagttgggg cgatcaccac accaccagcg tgtttacctg cattacgagt
    37081 tacaccttcg agcttacgag ccatatcaat aaggtctttc acctcttcat cggcttcata
    37141 tagctcaggc aattttggct cagcggcaaa ggctttttca agcgtcattc ctggatcggg
    37201 cggaatgagt ttggagatgc gatccacaaa gctatagggg tgtccaagca ctcgccctac
    37261 atctcgaatg accgctttcg ccgccatagt accgaatgtg ataatttgcg ataccgcttg
    37321 tcgcccgtag gtttccgcaa cgtgttcaat cacacggtct cgcccgtcca tacagaaatc
    37381 aacgtcaaaa tcgggcattg aaacacgctc agggttgaga aaacgctcaa aaagcaaatc
    37441 aaattccaat gggtcaagat cggtaatctt caacgcataa gccaccaatg agcctgcccc
    37501 tgagccacga cccggtccta ccggaatatc attatctttg gaccattgga taaactccat
    37561 cacgatcaaa aagtaacccg ggaaccccat ttggttgatc acatctaatt caacttgcaa
    37621 tctttcgtca taaaccgacc gcttgttcgc cctttcctca ggatcaggga atagaaactc
    37681 taaacgctct tctaagcctt ctttcgattt ttttaccaag aaatcttcgg tggaaagctc
    37741 accggtcggg aaatttggca ggaaatactc gcccaaacgc acggtaaccg aacagcgttt
    37801 cgcaatttca accgtgtttg ccaatgcact cggtaaatcg gcaaacagct tgcacatttc
    37861 ctcttcagta cggaaatatt gtttcggtga gtattttttc gggcgtttcg ggtcgtctag
    37921 ggtgtagctg tcgtgaatgg caacccgaat ttcgtgtgcg tcaaagtcat cttctttcaa
    37981 gaagacaaca tcatttaccg ccactaacgg aattgcattt ttttgtgaaa attcgaccgc
    38041 ttgtttgata tagcgttctt cgtctgcccg tccggtacgg caaacggaaa ggtaaaaatg
    38101 attcgggtaa tattgctgat aaaaagctaa tttttcttca gcttcttgtc ggttttcttt
    38161 gagtaaggct ttacccacat cgcccattcg cccgccggaa agaatgatga tgccctcatt
    38221 cagctctgct aaccattcac gttccaccat cggaaattcc acatagcctt gctgataggc
    38281 tttggacaaa atttgggtaa tattatggta gcctttgttg ttcttcgcca gtaatgtcag
    38341 ctcaaaataa tcttcattgc cgctctcggt tctaacataa acatctgccc cgataatcgg
    38401 cttaatccct gctcccaatg cttcgccata gaatttcacc aacccgcaaa agtttataaa
    38461 atccgttaag cccattgcca ccatattatt agcggcagcg gttttaacta aggattttac
    38521 cttagctaaa ccattaatca ttgagaaatc actgtgaact tttaaatgaa cgaaacgaca
    38581 atctgacata ggaatataat ctaagtaaag aagtttcccc tctttagtaa agactgtcag
    38641 gttctaaaaa gtgaagcctt ctgtgaataa tcccgttggg cgaatgttat tcgcccctac
    38701 aaacgagcat tattcttgct cagagttaca tttaaaatcc gaatgtaggg gcgaattaca
    38761 ttcgcccttt cagaacctaa caaccctgct ttatctaaag aagggagtta aaattaatca
    38821 cgttttttgc ttaacagcca ccaaacgatg atcaaacaga gtaggcttgg aattaatgct
    38881 ccaaccggta taggtaacca agtggcaatt aagcttaaat tgccaaacac aatatttgcc
    38941 acatagaaca taaagccggc aacaatacca atcacaattt tcgcccccat cgtactacta
    39001 cgaagcggcc cgaaaataaa ggagatcgca agtagcatca tcaccgccat tgagattggt
    39061 tggaatactt ttcgccagaa ggtgatctca aaacgtttcg gatcttgtcc ggtatctttt
    39121 aagaagccga cataatctgc caagcctgaa atcgagagcg actccggttt gagtgaaaca
    39181 atgcctaatt tgctaggggt taaactggtt tgccaaactt gatctggctg tttagcttgc
    39241 tggatctgat tttctcccac agtcgatttt tccactttag atagcaccca gcctttttca
    39301 tcactgtaat tcgcagttcg ggcttttaaa acagattgca attcacgttt gttttgtcct
    39361 tcgccgaatt gataaatcag tacgttatct aagctttttt catttttaat atgattaata
    39421 tagataaatg aattgccatc tttcgcccaa aacccgtctt ttgtggcaag cattgagccg
    39481 ccactttggg caatcgaacg catattacgg gcaaactgct cggtttgtgg cacgccccat
    39541 tcgccgataa tcatcgtaaa aatgactaac ggtaaggcag ttttcatcac ggctaaacca
    39601 atgcggaaac gggaaaaacc ggaggcttgc atcaccacca attcactaag gctcgctagg
    39661 ttgcctaaac cgagtaatga gccaagtaat gccgcaatcg ggaaaaaggt ttcgatatct
    39721 cgtggaatag ttaaaaaagt atagtatgcc gcttttaagc catcgtaaga tccacgtcct
    39781 acatcacgaa actcttccac aaatttaata atcgccccaa gcccaatcaa cataaacagg
    39841 gttaaaaaaa tcgcggataa aatcgttttg ccgatgtagc gttctaaaat attcattgag
    39901 aaaaattgca ttatgccacc gccttattgg ttaatttttt tgcaccaaat tgatagcgta
    39961 acttagacat aaatttacta tcccacgcat ttaaaataac acctaaaact aaaaaggcaa
    40021 ctgataccaa cggcattaac acttccgcat tcaacttgcc tgatgcccct gacgatttta
    40081 gcgagctttg tagtaagaaa tagattaaat aaagcaataa cgccggcagt agtttagcaa
    40141 aacgcccttg acgagggttt acactactca ttggcaccgc taataatgcc attaacggta
    40201 cagctaaaat caaagcaagc cgccaatgaa gctcggcttt tgcttccggc gttttggttt
    40261 ccattaattt cttgaaatcg gctcgttgca ctaatttctc atcagattca acgtcttgat
    40321 agcctaaata agcagaataa ttctcaaaat gtgaaatacg gaaatcggca ctttgtggtg
    40381 taccttcaaa acgcttgctc tctgccaagg ttaagacttg atccccattt ggcaaacctt
    40441 gcaacgtgcc ggattcagca acaaccactg aaggtttgtt tttcttctgc tgttccggct
    40501 ggaaaacgta gatatcattt agactgttat tttcaatttt atcaataaat aacacatagc
    40561 caccggcaga cataaattgt ccggccgaaa gagccgcaaa acgtgggttg gctttcgctt
    40621 ccgctaacat ttcactctgt ttattaattg cccaaggcgt aagccaaaac acgttataaa
    40681 ccgctaatgc agtggtaaaa atcgagagaa acatcgccac tttaaccaat agcccttgcc
    40741 cgataccaca agcccgcatt acggtaattt cactttcggc ataaaaccgc ccgagggtta
    40801 ataacaaggc gataaacagt gagagtggca gcattaattg tgccattgtc ggcataccta
    40861 agcctaataa gctcaccact aaatctgccg gtactttacc actcacagca gaacttagaa
    40921 cacgcactaa ttgctgacaa aaaaagatca gtaataagat aaacaatatc gccaattggc
    40981 ttttaaatat ctctttggtt aaatatcggc ttaagatcac gttttttctc tataacattt
    41041 acaaatctga ataccgctaa acacaagcgg tctatttttg ttaatttttt gcaaagagcg
    41101 caaaataact tattcgaatc gctaataata cctttttcat acaaaaaaat cacctataga
    41161 aaatatcacg cacggcaaaa ccgtgcgtaa gtattattgt tttttcgatt ttttcgatga
    41221 tgttgcttta tgagcttcaa gaattaattt cttaccttgg ctatcttcaa tttcaatctt
    41281 aggtggtgct tccgtatttt gatgaaggat agctataata ttttcacctt gtgcaatatc
    41341 ttcaaagttt cctttcacac gtaacttagc cgcatcaaca ctagtgtcaa atactaagaa
    41401 tgtacctaat gcggtaactc taatattttt aagccctata ttgtccttcg ttaccgtttt
    41461 atattgaggt gcttttttcc cttttgcagc cataatcttc tcttgattag tcgcaatatt
    41521 aagaatattt tgaactttag tcgcttctgc tgtagattgt gcctgttctg ttaaatttgg
    41581 ttctccatca aaaataacat ccccaacaaa ttgcacctct ttaggctcat tttgcaataa
    41641 tggtgcaacg tctttagctg aaacaaccaa aaataaccgt tcacctattt tttcaaaacg
    41701 gacatcaata ttggttaatt gtgattcaat ttgttcatta attgtcttga tcgcagtttc
    41761 tgtctcattt tgaagcgata ttttacgtgt aatatcaaca tcataagcaa taaaaccaac
    41821 ttttaaacgt tgtgataact gctgaagtaa attgcccaca tttccatcat aagaaagacg
    41881 taactttgcc tgctcatagc gactaatttg agcatcatca ttagcgaaaa tagtgttttg
    41941 agtccctaag ccgattagac caacaacaaa cgttttaccc caaaagcgca tcatttttat
    42001 ctccaattat tctcttaaat ctaaaaaact cttttagtat aaagtaagca aacta
//
LOCUS       DANLZQ010000011        41613 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.011, whole genome shotgun sequence.
ACCESSION   DANLZQ010000011 DANLZQ010000000
VERSION     DANLZQ010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 41613)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 41613)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..41613
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.011"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(10..2862)
                     /locus_tag="PXE50_000511"
     CDS             complement(10..2862)
                     /locus_tag="PXE50_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HDL5621448.1"
                     /translation="MVQAVSFSHFFAIHYFYFFLHKTKGQCTAKPLFSILLFHLFPKN
                     SAKFLLFFYFLVLMVLYSNEVANGKLLITGGTNLNGTLSAEGTSEIILSGRPTPHAYD
                     KVANKEVLIEGDWINRSFNATIFAAKDNGKLEISRNVANINGNFNLTDNATAQIGFTQ
                     GTSQACIRSDRTGVATCNINATLSETDLNSWERTKVAGNVSLADNSTFSLGSKADLTG
                     SITAQESTKVQLNDGSIANLTGLSTTGIFNGANGSTVNLSGVWTTLTNTVVDVLNVAN
                     GSQIHLNTPTATKQNTLTANTLTGNGIFKFVADLTKTASDIVTIKDTASGQFSIEIST
                     NGSAHSAQKIKLFETTNEEDFSLNLANEVRSGEYRYHLLKEGNVYYLNPEKEEEPKIT
                     QKGPSETADPLPEYTGDIEHSEKGPGETADPLPEYTGDIEHSEKGSGETAEPLPKYNG
                     NAHLIASELTAQTNAVLGVTTVLDHVIHSEGTQKQNTLTANTLTGNGIFKFVADLTKT
                     ASDIVTIKDTASGQFSIEISTNGSAHSAQKIKLFETTNEEDFSLNLANEVHSGEYRYH
                     LLKEGNVYYLNPEKEEEPKITQKGPSETADPLPEYTGDIEYSEKGPGETADPLPEYTG
                     DIEHSEKGPGETADPLPEYTGDIEHSEKGSGETAEPLPKYNGNAHLIASELTAQTNAV
                     LGVTTALDHVIHSEGTQNWKVWSKTDYQTTEHRSAGYGFNQDANVIHLGLEKALDNQV
                     TLGMILSQSKARNNFDHYYSGKGRLTMLSMYAKKTWQNGVFVAIDTGFGKASNRLTYQ
                     ANTVKLDRSVFVTGLSIGKAWESANVNIIPSFSARYHHLSSAGNQLVDAKIETNAVDL
                     LALQAGLSINKTLELNGLQIKPEIGSYFVDASHGKLRTRFNNLQIEQQMGRYFKQEAG
                     ISANYRNINAGIQAGFLTGNTLNKQRYISFKVTYEW"
     gene            complement(2910..3587)
                     /locus_tag="PXE50_000512"
     CDS             complement(2910..3587)
                     /locus_tag="PXE50_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5621449.1"
                     /translation="MNSIIRKEWFTASEVAGMGNLPEQPSNVTRRATKNNWLKRQIEG
                     KRGVAFEYHYSSLPISVQQELGFAQTAVKEEPRTLVAAQTADEMERVPFYNVQASAGF
                     GAFNSEVYAPDDYIGLSKRWLDVRGFYLSYLAFITASGDSMYPTISDGDMLLVNRATT
                     QPKDGKIYVFRQGEQLWVKRVQGIMGGIRLISDNKELYSPIDVIFDETLDFEVIGQVV
                     YIGHEMI"
     gene            3801..4019
                     /locus_tag="PXE50_000513"
     CDS             3801..4019
                     /locus_tag="PXE50_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5621450.1"
                     /translation="MARNKRVRDMSNFEIRGELMKIGKSLSQLGIENGLAKTTVRNAL
                     DKPYPKGEQIIAKAIGKTPQEIWPSRYE"
     gene            4029..5999
                     /locus_tag="PXE50_000514"
     CDS             4029..5999
                     /locus_tag="PXE50_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mu transposase C-terminal domain-containing
                     protein"
                     /protein_id="HDL5621451.1"
                     /translation="MKEWFLAKEIAGLSGVPELPNSVSRLATKEGWQKRQIQGVRGVT
                     YEYHLTSLPIETQQQLRLNAALAVIPQAAELQPKRDDPALIARLNNATDKGRDKAKGK
                     AEACMQLQAFLDQGFSYTQAEAGAATAKNVSQGSLKNWYYKVKGHPVHLWQAILISES
                     GRSKKPQLKAKITEEAWDCFLADYLRPEKPDLRASYRRTQAIAKQYGWQIASLQTFQR
                     RVLAEVPYEVILLKREGANAVAKLVPALQRTVKDILAGEWINGDGYQHNVFVKWHTGE
                     IVRPKTWFWQDVRTRKILGYRTSISENTDSIRHALMDVIFNVGIPKTLTLDNTRAAAN
                     KAMTGGIENRYRFKHTELDPKGIMPILGIDVHFTSILYGEGHGQAKPIERAFGRGGIG
                     EKIDKRPELSGFYTGRNAQETPDNYNGGKDGVDYNTFLKAIAAGIEEYNSQTERHTEM
                     CRGELSFNQVWERDYHPSNVRQASPEQLRLLFLQAETVSIKRNGSFTLKAAGKLYGLT
                     NVYWAESLIGITDKKVVARFDPDDLHGNVYVYNLEGQFLAEAVCREAKGFGDTSASRE
                     QGRLYQKVVKSAKAQAEALELLEAHELASLAPQVDVPEPIEKKVKEVLVKEDFIVDFN
                     TVRKATVVEETEEISIFDEVLLKQEKQLRIVE"
     gene            complement(6179..6667)
                     /locus_tag="PXE50_000515"
     CDS             complement(6179..6667)
                     /locus_tag="PXE50_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621452.1"
                     /translation="MLFRSLTDDEIHQIALDSARATFSGFKLKRANAIVMKNCITLFK
                     LSTINFCLAEYHSSFHHLTSIDDLDGIMPTVKKVAQMLSLQESKALIWLLYLKWLFVM
                     RQRSLQVLLENSADLIQGEVIAQPLPTFVKAVLAFQLETYHGLPEWIPEFDSAEFWQS
                     LS"
     gene            6699..7640
                     /locus_tag="PXE50_000516"
     CDS             6699..7640
                     /locus_tag="PXE50_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDL5621453.1"
                     /translation="MTLIDQIKQHIAESGSSQGKVAKEAGINAGALSAYLNENYKGNN
                     EELEAKLIAYLERIEAKKREFVEAPSFIETKTANQIFGSLRFAQNTGVLAIIHGASGV
                     GKTQAAREYRKRYANVWLVTASPSRSSLSEVLYEIALELGMNDAPRRKGTLARLIVRK
                     MKGTAGLLIIDEADHLPYEALEELRLLQEEVVNESDIGAGVGLVLIGNDKVYTRMKGG
                     INPAHEYGRLWSRSAKRTSIQKTKKEDTQAVAKAWGLSENQEALKVMQAITETGGGLR
                     ILTHTLRLAAMVAKDRMIPLTADLIQLARKDLLSTGD"
     gene            7643..7957
                     /locus_tag="PXE50_000517"
     CDS             7643..7957
                     /locus_tag="PXE50_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621454.1"
                     /translation="MRTPKPKHSFNRTNQAACRFLKQTQKAIIRLNSLGFTVLNIDFT
                     RIKPRIEVEIGNNKHIAQGLIYEGKAYRYSFGKSEDLGRWEGYYTMLEGIRVWWRQAA
                     IH"
     gene            7969..8205
                     /locus_tag="PXE50_000518"
     CDS             7969..8205
                     /locus_tag="PXE50_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621455.1"
                     /translation="MKTLALLTALLGLVGCDLVQSKQAKNYIGNNLTEICIDNVVYLI
                     YSGDKKGGITPKVNKDFYPYTCTNKEERQNGKTR"
     gene            8189..8482
                     /locus_tag="PXE50_000519"
     CDS             8189..8482
                     /locus_tag="PXE50_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621456.1"
                     /translation="MAKPDETPITKAECQSQLAELGVQYKKLPMAITRHICNATTNIH
                     GKVIKVSVVERVGYGVQITAQGNEKSCLVTYEAMLGMAEAMGLFDEVKEQNND"
     gene            8604..8822
                     /locus_tag="PXE50_000520"
     CDS             8604..8822
                     /locus_tag="PXE50_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANR family transcriptional regulator"
                     /protein_id="HDL5621457.1"
                     /translation="MNDELAAISASYAQHNRYQHYAEKAAEAERKGNYKEAQDHWEVA
                     KLSAKKTANRDWAEQRAEFCKRMHNKPF"
     gene            8832..9014
                     /locus_tag="PXE50_000521"
     CDS             8832..9014
                     /locus_tag="PXE50_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621458.1"
                     /translation="MTETVKAQLNSQLNEAIIQLIQAQKYLNQDDAIRSGVYIGTVQD
                     LLPKVHLKLLTANRKH"
     gene            9031..9420
                     /locus_tag="PXE50_000522"
     CDS             9031..9420
                     /locus_tag="PXE50_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621459.1"
                     /translation="MAITEEQWKEIKQKLDSIIGRVKFRYKEHLLTVDVVQIKRSLKL
                     AVYVDGEIDGAWTKEGHEIRPYLEEVWYRKERPFFNAKEKKEYRGLMSKKKLNEKIVT
                     YSPMFPSPTALTRQYKKLDGLELIEVI"
     gene            9469..9756
                     /locus_tag="PXE50_000523"
     CDS             9469..9756
                     /locus_tag="PXE50_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621460.1"
                     /translation="MNKNEFFKKYHLEGSLAILDLDANDDQSQFCYQALLEYRELPLD
                     TFLAEYSDDEDMTESEFIELMLDELEWIIRRAKNAKRFVKKRQKTMREEIM"
     gene            9875..10420
                     /locus_tag="PXE50_000524"
     CDS             9875..10420
                     /locus_tag="PXE50_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1018 domain-containing protein"
                     /protein_id="HDL5621461.1"
                     /translation="MTDKAKLIQLIHIAKSQLAMDDLSYREMLKRLTNKTSSTKCTVV
                     ELHKVLHELQTKGAKVKYFAKRSKKPTAYSPATGETAVKSQIAHKIRAVWITMGKHGF
                     LNDPSEKALNAYMRKVINNKTRPTILLNVSALEAGDASYMLEILKKWHKRVMIKALSK
                     SCTVDPKISYDELVEWYNEVM"
     gene            10407..10940
                     /locus_tag="PXE50_000525"
     CDS             10407..10940
                     /locus_tag="PXE50_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621462.1"
                     /translation="MKLCRCPICHSDIHLEALVEDEAGRELLGKISQLTHGVAQPMVA
                     YLGLFKPQKSNLNNSRALKILNDVLALYPCSLLLAQALSETVVSIRKKRQQAMENGQK
                     IEPLPNHNYLKSVYETQKVHFAVVRTGKTERETMKAELEKTRNAIAYVQRFVDLGREE
                     VVKNSPEYQIWLAHKPK"
     gene            11105..11464
                     /locus_tag="PXE50_000526"
     CDS             11105..11464
                     /locus_tag="PXE50_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL5621463.1"
                     /translation="MELVDIFEEKAPEVLTDLAKHIEVALEEKCQFSPEKAKQIGIDI
                     AQQMAQNWGGEVIYIPRNLLMALNERDMKIYEEFNGNNHRELARKYNVSMQWVYKIVK
                     KVHKDEVARRQMSMFEM"
     gene            11600..12109
                     /locus_tag="PXE50_000527"
     CDS             11600..12109
                     /locus_tag="PXE50_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 108 protein"
                     /protein_id="HDL5621464.1"
                     /translation="MSQNLTFRQIFDRLIGHEGGYVNHPQDPGGETHWGITKRTAVAN
                     GYMYAMKNMTREQAYQIYEKAFWQRYRCAELKPAVAYQFFDAVVNHGFGNASRMLQRA
                     VGVADDGIIGNITLQAINAKSESDLLMLFNAERLKFYTKLRNFPTFGKGWVNRVAGNL
                     EYAAQDNEV"
     gene            12112..12381
                     /locus_tag="PXE50_000528"
     CDS             12112..12381
                     /locus_tag="PXE50_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2644 domain-containing protein"
                     /protein_id="HDL5621465.1"
                     /translation="MAKLFKELLSTNGTLSTTSTVQFFGTLCVFGLMVYAVITQQPYA
                     ESLLNNVLIYLFGATTAKGVVTSYQAKIKGGIHKQQSTFKEEEGC"
     gene            12375..12722
                     /locus_tag="PXE50_000529"
     CDS             12375..12722
                     /locus_tag="PXE50_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2681 domain-containing protein"
                     /protein_id="HDL5621466.1"
                     /translation="MLMQQILGVIGVIAAILSYALFKSWQLKRERKKNAILQAEKQQQ
                     AVEIEQKKAEVKYVYISKKNNEKVTRSSASDIDDKLQQHGYFRDNNRLHGVQSDLSEP
                     CGYAGNETSDSCS"
     gene            12749..12901
                     /locus_tag="PXE50_000530"
     CDS             12749..12901
                     /locus_tag="PXE50_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621467.1"
                     /translation="MKYIKKLRKRWQIWRFLKNHPEVAQRRDLLAIAIKQGVENPVGR
                     ARRREP"
     gene            12901..13236
                     /locus_tag="PXE50_000531"
     CDS             12901..13236
                     /locus_tag="PXE50_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2730 domain-containing protein"
                     /protein_id="HDL5621468.1"
                     /translation="MDLFTVFWESIRANFGFISALLTIVVTAFWLKLDSKYAKKNDLG
                     ELLEIAKSHDNRLTTLETKVENLPSAVDVEKLKTLVTDVKGDTKATSKQVDSISHQLG
                     LLLEAKLKE"
     gene            13238..13534
                     /locus_tag="PXE50_000532"
     CDS             13238..13534
                     /locus_tag="PXE50_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621469.1"
                     /translation="MSLRDLLTQDQRLVILRSLAEAGYDANESIISDCLDLYGHDISR
                     DLVRTHLSWLEEQGLLTLERLRDGYMVASITQRGLDVAQGRVVVSGVKRPRPKI"
     gene            13557..14129
                     /locus_tag="PXE50_000533"
     CDS             13557..14129
                     /locus_tag="PXE50_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3486 family protein"
                     /protein_id="HDL5621470.1"
                     /translation="MSEKNTRGRASKVDLLPPNIKTQLAMMLRDKQYSQSQILEEIND
                     LIRDCGLPDEMLLSKTGLNRYASRMERLGAKIRNAREVAEIWTKQFGEMPQTDIGKTL
                     MEMVKQIAFETSLKLGEQEGGIEPKQLALLSSAIQRLEQAESLSFKREQAIRKEVAQQ
                     AAETAEKVVVQAGLSAETVRTIKEQILGIA"
     gene            14129..15685
                     /locus_tag="PXE50_000534"
     CDS             14129..15685
                     /locus_tag="PXE50_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase family protein"
                     /protein_id="HDL5621471.1"
                     /translation="MALLNNRPLNELAPECRSFLESIHAFNPNELLLGYQKRWIADDS
                     QLKIAEKTRRCGLTWAEAADNALIASTRKSDGGSDVFYIGSNKEMAREYIDAVAMWAK
                     AFNRVAGEIQEEIFEDEDKDILTYVIYFSSGFKVKALSSNPKNLRGMQGVVVIDEAAF
                     HEYLAEVLKAALALTMWGAKVRIISTHNGSENLFNELITDSRAGRKRYSVHTITIEDA
                     CRDGLYQRICQVVTKKTWSPEAEKEWIENLLNDTASEEDALEEYFCVPKFGSGLWLSR
                     ALIERQMSEATPVIRFTAKDGFSLVAEPTRYAEIAEWCELELEPILATLNPDLLHFMG
                     EDFARSGDMTSLVVLAQQQNLVRKVAFIVELGNMPYKQQEQIVMFMLKRLPHFAGGAF
                     DARGNGGYLAEAARDEFSTLIDCVQLSEKWYREHTAPFKAALEDGELEAIPKDADILA
                     DLRSFQVVKGVPRIPDKRTKSADGKSKRHGDTAISLLLAHYASRQLVQMPVEPVSRRP
                     RHSQQLTEGY"
     gene            15804..17258
                     /locus_tag="PXE50_000535"
     CDS             15804..17258
                     /locus_tag="PXE50_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF935 family protein"
                     /protein_id="HDL5621472.1"
                     /translation="MAKKNNLISEIATRARSIDYWAFGYYLPNPDPILKRMGKDISVY
                     RELLSDGQVRSGVRRRKAAIKGLEWRITTTNNEKVDEQIYQIFNRLPMNNLITEMLNA
                     ALYGYHISEVIWAKEGELFVPTEIIGKKPEWFMFDDENLLRFRTKENWADGELLPDDK
                     FLLTTQEATQDNPYGLGDLSLCFWAATFKKGGFKYWLEFTEKYGSPWLIGKHPRQAHN
                     TDKERLADALEGMISSAIAVIPEDSSVEIKDAAGKSASTDAFEKFLNFCKAEINIALL
                     GQNQTTEQESNRASAQVGLEVMEDIRSDDQAMIEATFNTLLQWIVKYNFNVEQLPKFE
                     FYEQEAINTDQVERDSKLHAMGVRFSKAYFEREYGFEAGDIEVQAVEKAEKSANTTEF
                     SEGQRRTQVPMPVPILEQLEHEGEAMVDDWLQGVRDKLAQADSLEDFQSQLDSLIPEL
                     SFAEYGELLALGSTVAELAGRQSVNDEIKAKRNA"
     gene            17251..18528
                     /locus_tag="PXE50_000536"
     CDS             17251..18528
                     /locus_tag="PXE50_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HDL5621473.1"
                     /translation="MRKFTFKQQAQYFEKKLNLRTNSYLDILGEEHDYFFVVAGANRN
                     EVLSEFRKAVDEAIHNGETLENFRKRFDEVVAKTGWEYNGGRNWRTRIIYDTNVYGAY
                     NRGRLQQHLELAEDMPYWEYQHNDNAHPRPQHVAWDGLVLRYDDPFWKYHYPIKAYGC
                     HCTVQALDDFDLKHDGKTVSPPPEIEFEQKTVGVRTGNSRVVTVPKGVDVGFTPHNFD
                     NLKAGRAANVDKLLMQKMVTADPIFASKAVSDLLAKEPVAKLHNQAFKNWVNDVANAK
                     GSALSQVENMQLLGVLPVAVIERLQQINLAPQSAIIAITKGDMVHALRELKQNTGIAV
                     PLEFWEKLPAKLQYPNAILLEKQQAETTLLFIYDVAQTKIAVKVNYDATLQDRHGAKG
                     RQKVLLNRAVTGSLFQDTTGLKSSKYEVLLGEM"
     gene            complement(18730..19074)
                     /locus_tag="PXE50_000537"
     CDS             complement(18730..19074)
                     /locus_tag="PXE50_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621474.1"
                     /translation="MMVNAEQAIELVYDLLLSRQWLVTKAEKLPLDPLSEKEAVMFLY
                     TLDQQTEASWLQLTPEQRATANGLIMDFIAKCLTSTKQWLVSDNIVPELQAIEIIKHE
                     IFLSHNSLVMPN"
     gene            19138..19602
                     /locus_tag="PXE50_000538"
     CDS             19138..19602
                     /locus_tag="PXE50_000538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HDL5621475.1"
                     /translation="MIKITLNNTQAVKSLQQIANQLEQPRRLYGILGETLKKIHTARF
                     KAEQDPDGNNWKPLASSTLALKRKRGKSTKILRQDGYLADKTAYNVTSDNVEFGSQEV
                     YARLHQFGGKAGRGKKVTVPARPWLGVGDKDEQLLLRKAEWHLGQIIGRMGK"
     gene            19837..20952
                     /locus_tag="PXE50_000539"
     CDS             19837..20952
                     /locus_tag="PXE50_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HDL5621476.1"
                     /translation="MTQIEIFKAGKRYDANGTLIDITPEMLQQTVAAYNPEFHEAPLV
                     IGHPKSNNPAWGWVKALSLEGDVLKAEVDQLDAEFSEMVASGKFKKVSAAFYLPDSPN
                     NPHKGVLSLRHVGFLGAMPPAVKGLKQVEFAEDDDFVVFSEWGVASLFSRFRDWLVSE
                     FGLEKADKALPPHEIDWLKEEAMRSQISKQVHAEQATPEPIFNEPAQPEGEPEMSAEE
                     KEELERLKAENEQLKAEKAQAEAEKMEAELEAEKAGNAEFCEGLVKQGKLAPVAKAAF
                     VQALNNLSVLKAGREPEFNEGEDVVSQFKSAMSQSPQIIQFGEYATADKANPQEAEAV
                     EYAEGTDPVSIEADQKVRAYMKAHNVGYAAAFNAIYR"
     gene            20983..21909
                     /locus_tag="PXE50_000540"
     CDS             20983..21909
                     /locus_tag="PXE50_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007524268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major capsid protein"
                     /protein_id="HDL5621477.1"
                     /translation="MTTHNLQKLRVQDPVLTELAQGYHNNELVAETLMPTVEIEKEAG
                     KIPTFGRLAFRLPSTVRNLRGSSNRLDPEDIGAIDVALEEHDVEYAIDYREENEAIFS
                     LRQFALNTTQDVIALGREKAVATLALDESRYETDNKVTLSGTSQFSHKDADVFKVFDT
                     AIRAVKRAIGRKPNVCVISGDVWAALKEHPAVVEKLKYSQVAIVTPEVFAKLIGIETV
                     KIGEAVYEESGQLKDIWSKDIVVAYVAPRSTGGKGTVYEPSYGYTVRRQKGLFVDTYK
                     ESGGKIEVVRTTDIHKPHLVGAAAGYLIKAAV"
     gene            21978..22259
                     /locus_tag="PXE50_000541"
     CDS             21978..22259
                     /locus_tag="PXE50_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621478.1"
                     /translation="MAKFIVLHTPILHDGKRYEVGAEIELTAEQAENNAINLKAVEAV
                     PKPPKNASKPEDEPKPEGEPKPEDAVTEDDVKLAEAKIAEAEQPKGNKK"
     gene            22259..22693
                     /locus_tag="PXE50_000542"
     CDS             22259..22693
                     /locus_tag="PXE50_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1320 domain-containing protein"
                     /protein_id="HDL5621479.1"
                     /translation="MYVQIDELLTAFSRKIVVQLSNDEPTATEPDLKMLETAVKVANE
                     RIDAALRSRYTLPLADVPTLINQHALTLARYWLYARRPETKMPDTVKETYQQAVKELE
                     QIATGKLHLGIAESSQILEDDVLADNSEYEVRANARIDTSRY"
     gene            22699..23196
                     /locus_tag="PXE50_000543"
     CDS             22699..23196
                     /locus_tag="PXE50_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gp37 family protein"
                     /protein_id="HDL5621480.1"
                     /translation="MSATQPILEDICQHLRQALPEWEVELFPNDPSTYHLSHINGAVL
                     ISYLASKFEKPRTTQAVLQVRHVQIALTVLTRDLHNDVGALDLLDKLRLLVVGFKPQN
                     CGECWLIDEFFNGSSEETGLWQYQLILQTETQQVQHQAVENLPKFVTAHLRRQDQPGS
                     PGLKT"
     gene            23281..24666
                     /locus_tag="PXE50_000544"
     CDS             23281..24666
                     /locus_tag="PXE50_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath subtilisin-like
                     domain-containing protein"
                     /protein_id="HDL5621481.1"
                     /translation="MTFHHGSETERVNGGSVPVSVVDSAIIGIVGTAPIGAVNELTVC
                     LTKKDFAKFGTILNQGFTLPDAFDILARYAAGKVYVVNVLDPSRHRTTVTDEVLTLDR
                     NTLTAQTAKTGIIAVTRVKDGANVLNADRYSVDLQTGVVTFVSAPSAPKISYIYADPS
                     KVTEEDIKGGVDSLTGKRKGFELLRDGFNLYGADAKILICPEFDKTASCAAALATLAD
                     QLHAKAYIQLPKGTSLSKAIQGRGPAGTINASASNENVRHFFPYALGSSNTLESLATH
                     AAGLRMLIDVEKGYWFSTSNKELKGVIGLEIPLTARVDDKQSETNLLNAVGITTIFNS
                     FGTGFRLWGNRSSNFPTVTHISNFEVASRTGDIIDESIRQAELQFIDLPIDDALLDSF
                     LETIDTFLRTQKSLVGYSVSLDYEYDLVDAFSRGQVPIVYEYTPKIPGERISNKSVMT
                     RKYLANLVSQR"
     gene            24677..25192
                     /locus_tag="PXE50_000545"
     CDS             24677..25192
                     /locus_tag="PXE50_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
                     /protein_id="HDL5621482.1"
                     /translation="MSIAINQIVNGNVYINGNSQMGRVNEVKIPDIEFEFIEHKGLGM
                     HGVIKLPAGTNAIEAEITWDSFYPEVRAVMLNPYKYTQLQIRSNLQVFNSQGLAAEEP
                     MVTIMNVSAGKIGGTGHKNKENAEFADTLNVHSIKQTVAGRELLFIDVLANIYRVNGV
                     DVLQKFRTNIG"
     gene            25288..25602
                     /locus_tag="PXE50_000546"
     CDS             25288..25602
                     /locus_tag="PXE50_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HDL5621483.1"
                     /translation="MANAAQQVLTNLRVQTTYKLQYPIALPDGRVIETLDVRRPKGKD
                     FRLLDEKGFDPEKDGVKILRFYIQQLTTLVPEDIDELDAADIKGLNNLLEDMLIEGKS
                     DK"
     gene            25599..25751
                     /locus_tag="PXE50_000547"
     CDS             25599..25751
                     /locus_tag="PXE50_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005658873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HDL5621484.1"
                     /translation="MSELDTVYADLAWWFKFSPSELLELDLVDIPKWVEQMNRQIKAG
                     YGQILR"
     gene            complement(25730..26032)
                     /locus_tag="PXE50_000548"
     CDS             complement(25730..26032)
                     /locus_tag="PXE50_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621485.1"
                     /translation="MLTKLNNRITEWAGFEACVTRTECTAKWLLAVALVGWSIFYWLD
                     AIQSIQSLSEGVSFVLIYGLILTILAWVGVYLAWGVAILLTLATEPFIWLYRKICP"
     gene            26080..28737
                     /locus_tag="PXE50_000549"
     CDS             26080..28737
                     /locus_tag="PXE50_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDL5621486.1"
                     /translation="MANNLAIGMVIGASLSSGFHGAFSGAKKKLEQLEQAVAKNQQSH
                     SKLGSELTALRSKQATLYAEMSRASSKGGAGLALMQQEYKKIGKEIANISREQRKWST
                     ELEKSIAKQTKLRNAMERHTQAKENRDELKGKIIGTVASAAMGVGVMKTYMEQEEAAN
                     NLKISMLKADGSFGKFEEIGKIADTLGTDLPGTKKDFYKLAMALKKQGVSDDVLTGGA
                     LKTSAELNVLLDMDQESGGEFLAKFMESHRLNENELPQAADYLQRAMFAGGLSKEQMY
                     ESMKYYAPKLNSMKLTGAENTEKVLAIEAMAGQQGLEGSTFGTGLNMMLSRMNKGPEM
                     LKAAAKGMKAEAREMMEAVGVEFNFWDKNGSFKGIDGMLAEMTKFEKIRKKFGDKGVG
                     LVAEELFGIEGGRLADILAMKGQKGLDEMLSKMREQASLQDRINLKTNTLGAALESLG
                     GAWETFVGDIGSVFAEDIKGFSKGLQSAVEWLVPFVSKHKEAIKFVGGLVAGLVILRG
                     VLQAGSFVIQTVTMAMNALKIAAMTNPIVLVIGAIAAGAYLIYSHWDSIAPWFANLWQ
                     NVTAYFNQFWTWVKGVWSGVTDWVSSVWNGVATFFGQLWTTITSLFSVAWTNIQTIWG
                     GATAWFSGLWDGIKSAAFGMFDSISQKVSSVVASIKSFLGFGDDVDKMGAKIGNVATQ
                     VISKEHSGQLSKTADMAANTGFSSGGFTGQGGKYTPAGIVHKGEYVMTKEATSRLGVG
                     MLDSLNYGGAMGFTQPVLQPILGKQKGFFGSLWDDVKFGANFVGNLLGLNQGSLKTPD
                     FNPNATNASGQNSSIFSNYEPLNRNAVTQQESSQAPQIVVNFNPTINVNGNATQEAQS
                     QIMQQLQMSAYEFEKLLNRVLDQRSRRAY"
     gene            28747..29670
                     /locus_tag="PXE50_000550"
     CDS             28747..29670
                     /locus_tag="PXE50_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5621487.1"
                     /translation="MYFMLGNIAFEPVNLTEFSEQHTAEFAEHAVLKGKPRLQAMGEK
                     LNELNFSLRLHHTIGGVESRYQALLEAKAKQAALALIWGSRYKGDYVIVDISSTTLFT
                     DGRGNALAREMQISLKEFVGDNDGGVLGEALNFGGGSLLGSILPSGAVTTLSQIKTAV
                     SRGVELYNSGKRLVDEVQNTVAIIRQLKNDPATALAYLPAALANLDGALGHFGNLTGS
                     SATLGGLQEKLPAAVVFSEEIGEIYQSLQTMRSSLGNASANSWDNWFTPAESALTEVT
                     DSFDHLAKPVAKMTAWIVLRTDEEAENDTVA"
     gene            29654..29881
                     /locus_tag="PXE50_000551"
     CDS             29654..29881
                     /locus_tag="PXE50_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail protein X"
                     /protein_id="HDL5621488.1"
                     /translation="MTQLLKHIVKQGERWDNLSYQYYGNAFEYGRIIDANPHIGFCEV
                     LPIGVTIYIPVLNVKPTNNENMPPWLRGRDA"
     gene            29874..30938
                     /locus_tag="PXE50_000552"
     CDS             29874..30938
                     /locus_tag="PXE50_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621489.1"
                     /translation="MRNVPKPDFSLFYEKTNITAEIEPHLVQLTYIDHLEGQSDELTV
                     EFEDIQGKWIRQWFPTQGDKLKAAIGYQGEFLTDIGEFEIDEVEYSYKPSTINLKALS
                     TGISKANRTLKPKAYENTTLAQVVAKVADNLKLKVVGKIKAIPIKRITQYQERDVEFL
                     ARLAREYHHSFKIVGNQLVFTDKSELGQSEPVLMLEERDTISLRLRDRIKDTAKAVEI
                     SGYDTSGKKVVKKRKKAKALRPNIKQAKSASEDTLKIITRGESQEQIDARGEAALATQ
                     NEDQAAGDIELIGNPKLVAGATILLRNFGVFSGKYLIKSSRHTISRSGGYTTHIEVRM
                     LEFIADDLITLGMEAGNANA"
     gene            30925..31461
                     /locus_tag="PXE50_000553"
     CDS             30925..31461
                     /locus_tag="PXE50_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HDL5621490.1"
                     /translation="MQTHNFGATYQEGIVSAVDPKTHKVRCKIPALEDLETAWLSFLT
                     PNAGGNQFYCLPDVGELVAMLLDAQGEGGCVFGAIYNEQDPTPVADSDMWVKKFSNGT
                     EISHNRKTGDVVVKTNGHLTATAQGGATINANTVVNGTLHATGKITSDEEVSAPVVKQ
                     GTVELGTHKHGGSPEPNK"
     gene            31516..31878
                     /locus_tag="PXE50_000554"
     CDS             31516..31878
                     /locus_tag="PXE50_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HDL5621491.1"
                     /translation="MNRQTSIQLTHWQLAPSTDTVEVVQGIDDIHLCIVNILSTQKGT
                     DILRPEFGSDHFRYIDYPEDVAIPNFVREITTALQKWEKRIEVEEVLVDGSAPHFIFT
                     VMWHLTDDVYREIYRTTV"
     gene            31888..32991
                     /locus_tag="PXE50_000555"
     CDS             31888..32991
                     /locus_tag="PXE50_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HDL5621492.1"
                     /translation="MTEAIKIIDDDVKTVLAEAIADYEKRTGKILQPAHIERSIIQTY
                     AYREQLLRKGINHAFLQTFPQFATGIALDLCGETFGCYRLRDKPARTLLRFSVSGEHT
                     AIVIPKGTQVAINDELYFSTLNDDVITPLITYVEIDAECNQVGVIGNGWESGRVSKLK
                     TALATNYKVTVENIDITSGGLMQEEDEPYRKRILAAPEAFSNCGSIAAYDYHVRSVSQ
                     DIADVNISTPRGGLVRIAVLTQKGLPDTRLLDDIKKHVSAERLRPLCDMVEVIKPTER
                     RYQITARLILLDGYREDLVKAKAREALQLYLSDKTKKLGLDIVPSAIISALRVEGVYD
                     VNLIQPVKTIINETEWANCTAISVEVEEERRDG"
     gene            32984..33550
                     /locus_tag="PXE50_000556"
     CDS             32984..33550
                     /locus_tag="PXE50_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5621493.1"
                     /translation="MASLHYADIIVRDPKYKALADLSKRLNLLDTSQIMTTLVDLLGD
                     ECIPLLAEKWSVTGYDGLLVADSENSKRALIKRAIELHQLKGTPWSIREVLRRLGFGE
                     VEIDEGLKNRLYESTYVSGIPENERWAHYAIRLSNPITNEQARNIRKVLRNFAPARCS
                     LAVLDYKADPIRYNNKATYNGTYNHGSS"
     gene            33560..35839
                     /locus_tag="PXE50_000557"
     CDS             33560..35839
                     /locus_tag="PXE50_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HDL5621494.1"
                     /translation="MAGVQETAQWENHVYRIEENDPVHGGENGVTNKPIKHLANRTLY
                     LRRLLTEAGQRINPKKITATSKNSNDLTGHTHEIDHASLTQKGIVQLNASIQSTSTTE
                     SATPSAVKAAYDKAATAEQKATLANEKVEAIKVGGRNLLIQSNTPHNGNAYSVRYALA
                     EAPKVGEEIVVTLWGELGSQRTGIGVYNSQGATELAKLVKIRDGVYQGKGIWRKPMSE
                     GRERTPNDTHLNVYFYPKTATDNNRIERIQLERGSIGTDWTPNEADLKAEISAIRTKL
                     IPVRGGNVATTLNAAKRSDWFREMQIPYQSGWGYYTQAFHNSGTQHNYSNLPLTGRYY
                     FIAELYHNSGYSHLRITYPSLKRTFESAINLNNEDLILDWREVVFLKDGLYQGTFKTT
                     GTLESAYRLRAARDDERYQPYLQMVDMGYDLANPPVGKNKIIGSVDYYVKNGTSESSK
                     ATMMAAAMPDKNVFWEVALWNAAQQRNVLFKGYSKTNNLSIGKTTDNERDRVQVNGTI
                     QATAPADNANNDQVPTTAWVRKMAKILADGKVSKAGDTMTGHLFIKNGEYSAVHTYNT
                     SGWFAKWEAAPLSDSHFAAIVYANDRETVINRVLIPKKNGTVALINDIADTVRAAVSR
                     SDKSRSRTFPLQTGKKYTTTGSVTIYPDGRIVQIFHLKNIKAAWFDYEASAVGDRHRV
                     VNIPLWTAMPNKIFDVDVKTVRPSNNASTYYIEAAEWLSAWQIYGNDTNKSSVNINLS
                     RFRGGKDEDMDLYVTVEGY"
     gene            35840..36442
                     /locus_tag="PXE50_000558"
     CDS             35840..36442
                     /locus_tag="PXE50_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621495.1"
                     /translation="MAYFVNVIDEQGNYELIDDEFIGLYPDLDFNTLPKLTDKQYQTY
                     LAKANGKERFVNGEFVYEQIKVDMQAVISAEKSAKLAEINQKAQAFINDLAKYNETPK
                     FERDTWLEQAKEAKAWVADPTVQTPTLELIAQMRGIPLDTLRQKAYEKAMAYQTVAAI
                     VAGQRQGYEDRLEQAETLEQIQAIEPMYQLPQGANNEQTD"
     gene            36426..36701
                     /locus_tag="PXE50_000559"
     CDS             36426..36701
                     /locus_tag="PXE50_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621496.1"
                     /translation="MSKLTKLKSWSYHVLIAIDQLFNALTGGAADETFSSRCYRGAVL
                     AENPKKRWRFWHSFLNCLFLDPKHCYAAYKAEVHRKQYPKAFRLGGI"
     gene            36701..36988
                     /locus_tag="PXE50_000560"
     CDS             36701..36988
                     /locus_tag="PXE50_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621497.1"
                     /translation="MKKQNLKLVRGDDVSFRFSIKDSTGQPLALKDLWFDLHLVSYQG
                     EVLIALSTDDGSIETAEAGQMVLHFSHQQTARAEWTSANYDLQLTHDYTRV"
     gene            36998..37162
                     /locus_tag="PXE50_000561"
     CDS             36998..37162
                     /locus_tag="PXE50_000561"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621498.1"
                     /translation="MTSIIELDLTDDLIIEVQLDSTIITGDSFLANLPDLLQIYNQAK
                     SDSSKELNND"
     gene            37155..37859
                     /locus_tag="PXE50_000562"
     CDS             37155..37859
                     /locus_tag="PXE50_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621499.1"
                     /translation="MTKHKNHENHPIAITFYQLGKDVGDINRRLAVIEQREQSAQPSQ
                     PQAEAVTMPQQDAVAINNINAVLEAVEKYKTFEKYNTQWQERFEKFLSRNPNDYELSE
                     EQRQKLYHTMCQHLWQVNFTEINSKQYELPIPQQFQGKFGYIVKTSGGSTEISFELLS
                     ETHSTYLYPDSYIPEGGGDVMLKPAYIYLVIPDLVAMREPEVVGVSPLKLNILQKHLL
                     TPQKLQEQKPLNTKAN"
     gene            38028..38183
                     /locus_tag="PXE50_000563"
     CDS             38028..38183
                     /locus_tag="PXE50_000563"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621500.1"
                     /translation="MNKSLVALAVAAMASKAQTKQQASKQASKQASKQASKQASKQAS
                     KQASIVR"
     gene            38180..39019
                     /locus_tag="PXE50_000564"
     CDS             38180..39019
                     /locus_tag="PXE50_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621501.1"
                     /translation="MEKVFKQAPLPFSGQKRMFLSHFKQVLNANIEADGKDWTIIDVF
                     GGSGLLAHTAKREKPLARVIYNDFDNYAERLNHIKETNQLRQEIYQIVDEIIPKNKRI
                     SNEIKAKIINKINDFEGFKDLKCLSSWLLFSGEQVATLDELFKHDFWHCVRQSDYPEA
                     TGYLDDIEVVSESFHQLLPRFHDKEKVLLILDPPYLCTRQESYKQENYFDLIDFLRLI
                     DLTKPPYIFFSSTKSEFIRFIHYMVQNRKENWQAFEGAERIVVNASASYNGKYEDNMV
                     YKF"
     gene            complement(39056..41494)
                     /locus_tag="PXE50_000565"
     CDS             complement(39056..41494)
                     /locus_tag="PXE50_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S6 family igA-specific metalloendopeptidase"
                     /protein_id="HDL5621502.1"
                     /translation="MKHTFKLSLLATSIAISLSPTLLASIVRGDVDYQYFRDLAENKG
                     KFFVGATNIPVIDKTGKNIGTFLQVTPTKQVEVESNISPKPNVSLSECFDNESLPGCY
                     EFLYGGGDEDSNDLPVFETVTGETMSIPMIDFSSITRQTGIATLVNPQYVISVNHNQG
                     YRDIQFGDSSSEKADDHHYNYSVVRRNNYMPDPNKERTDLGKGIEKRERNDEGEKLIL
                     DGSGNPTPRWDYHAPRLSKLVTEVAPANEIERTTENVQDFYSVFSDPFIFPMFIRAGS
                     GRQAVVNNERDRLNNGRIEVGNGPFLTGGSVLPVTNGDPSVPGSDFNSRILVAKTENN
                     TINDVFKDHGYGPLTTLGLPGDSGSALFGYDVRTKKWVVLGVYSDYFSENNTLGGDVY
                     KSYWNYHHPHYVRALEKENNAGAINANGARLTWTPSGNTSSIVGGNAPLTVNLADTSL
                     PTLQGHNGNTGDNPWNPQLQHGKTFHILGENNTLSLTENINQGAGAIHFHGNTTVEGM
                     KAGITWLGAGVDIDKDKNVIWKISNPAGDRLSKIGQGTLTINGKGENKGSVSVGDGTV
                     ILNQQADENNKKSAFSELGIVSGRPTVILNSSDQMDPNNIYFGYRGGRLDVNGNDLTF
                     RRIQNSDEGAMVVNHNTAQTANITLTGIVSPTIDQVKVQAITSPDQVSRHLDKDIFTY
                     QRFPHLPTNFIRLKKPLSVAEITAIFNARKVFIDLDFATGLIRENEYFEVLKVTDESA
                     AKQQILAEKIKAAEGTVQGFNGYFGETDPSKTNGRLNITMNSNCSEPTKLRNATTKTT
                     KENRSFTFLILMVF"
BASE COUNT        12913 a         8284 c         9511 g        10905 t
ORIGIN      
        1 tctcaatatt taccattcat atgtaacttt gaacgagata taacgctgtt tatttagcgt
       61 attccccgtt aagaaacctg cctgaattcc tgcgtttata ttgcgataat tagcggatat
      121 acctgcttct tgtttaaaat aacgccccat ttgctgctct atttgtaaat tattgaaacg
      181 tgttcttaat ttcccatggc ttgcatcaac aaaatagcta cctatttccg gttttatttg
      241 caggccattt agttcaagcg ttttattaat tgacagacca gcttgaagag cgagaagatc
      301 aacagcgttt gtttcgattt ttgcatctac aagttgatta cctgctgaag ataaatgatg
      361 ataacgggcg ctaaatgatg ggattatatt cacgtttgca gattcccatg ctttaccgat
      421 actaagccct gttacaaata ctgaacgatc taattttact gtatttgctt gataagttaa
      481 gcgattgctt gctttcccaa aaccggtatc tatcgcaaca aaaacaccat tttgccatgt
      541 tttcttcgca tacattgata gcattgttaa gcgaccttta ccgctataat aatggtcaaa
      601 attatttctc gcttttgatt gagataatat cataccaagt gtgacctgat tatctaaggc
      661 tttctctaat cctagatgga taacgttcgc atcttggtta aatccatatc cggcagagcg
      721 atgctctgtc gtttgataat ctgttttaga ccatactttc caattttggg tcccttccga
      781 atgaattaca tgatctaatg ctgtagttac acctaataca gcattagttt gcgcagttaa
      841 ctcggatgcg atcaaatgtg catttccatt gtatttaggt aatggctcag cggtttcacc
      901 cgatcctttt tctgaatgct caatgtctcc tgtgtattca ggtaacggat cagcagtttc
      961 acccggccct ttttccgaat gctcaatgtc tcctgtgtat tcaggtaacg gatcagcagt
     1021 ttcacccggc cctttttcag aatactcaat atccccggtg tattcaggta atgggtcagc
     1081 ggtttcactt ggcccttttt gagtaatttt aggttcttcc tctttctctg gattgaggta
     1141 atacacattc ccttctttga gtaaatggta gcgatattcg cctgagtgca cttcatttgc
     1201 taaattaaga gaaaagtctt cttcatttgt tgtttcaaat aatttaatct tttgggctga
     1261 atgggcgcta ccatttgtgc taatttctat cgaaaattga ccgcttgcgg tgtctttaat
     1321 tgtgactata tcgctcgctg ttttcgtcag atcagcgaca aatttaaata tgccgttccc
     1381 tgtgagggta ttagcggtaa gcgtattctg tttttgggtc ccttccgaat gaattacatg
     1441 atctaatact gtagttacac ctaatacagc attagtttgc gcagttaact cggatgcgat
     1501 caaatgtgca tttccattgt atttaggtaa tggctcagcg gtttcacccg atcctttttc
     1561 tgaatgctca atgtcgcctg tgtattcagg taacggatca gcagtttcac ccggcccttt
     1621 ttcagaatgc tcaatatccc cggtgtattc aggtaatggg tcagcggttt cacttggccc
     1681 tttttgagta attttaggtt cttcctcttt ctctggattg aggtaataca cattcccttc
     1741 tttgagtaaa tggtagcgat attcgcctga gcgcacttca tttgctaaat taagagaaaa
     1801 gtcttcttca tttgttgttt caaataattt aatcttttgg gctgaatggg cgctaccatt
     1861 tgtgctaatt tctatcgaaa attgaccgct tgcggtgtct ttaattgtga ctatatcgct
     1921 cgctgttttc gtcagatcag cgacaaattt aaagatgccg ttccctgtga gggtattagc
     1981 ggtaagcgta ttctgttttg ttgcagttgg agtgtttaaa tggatttggc taccatttgc
     2041 gacattcaag acatctacaa cagtgttggt taaggttgtc cataccccag aaagattaac
     2101 ggttgaacca ttggcgccat taaatattcc tgttgtactc aagccggtta aattagcaat
     2161 acttccatca ttaagttgaa ccttagtgga ctcctgagct gtaattgagc cagttaagtc
     2221 tgctttactg cctaacgaaa atgttgaatt gtcagctaaa gagacattgc cagccacttt
     2281 ggttctctcc cagctgttta aatcagtctc tgataaagta gcgttaatat tacaggttgc
     2341 tacgcctgtg cggtcagagc gaatacatgc ttgtgaggta ccttgggtaa aaccaatttg
     2401 agcggtagca ttatctgtta aattaaaatt accgttaata ttggcaacat tacggctgat
     2461 ttcaagcttg ccattgtctt tagctgcaaa gattgttgcg ttgaacgatc ggttgatcca
     2521 gtcgccttca atcaggactt ctttattcgc tactttatca taggcatgag gtgttggacg
     2581 gcccgataaa atgatttcgc ttgtaccttc tgcagaaagc gtaccgttga ggttcgttcc
     2641 cccagtgata agcaatttgc cgtttgctac ttcattactg tatagaacca ttaaaactaa
     2701 gaaataaaag aataatagga atttggcgga atttttcggg aataagtgaa acagaagtat
     2761 tgaaaacagg ggctttgcgg tgcattgccc ctttgtttta tgtagaaaaa agtaaaaata
     2821 atgaattgcg aaaaaatggc taaaactaac cgcttgtacc attaaaacaa cgaaaaagta
     2881 aaaatgattt aagtagcttt aaatggcgtt taaatcatct cgtgtccaat gtacacaacc
     2941 tgcccgataa cctcaaaatc taacgtttca tcaaaaatca catcaatagg gctgtatagc
     3001 tctttattat cgctgattaa gcgaataccg cccataatgc cttgcacacg tttaacccaa
     3061 agctgctcgc cttggcggaa cacataaatt ttaccgtctt taggctgggt ggtggctcgg
     3121 tttaccaata gcatatcgcc atcactgatg gttgggtaca ttgaatcacc tgaagcggta
     3181 ataaatgcaa gatagctcaa atagaagcca cgcacatcta gccatcgttt acttagccca
     3241 atatagtcat caggggcata cacctcgcta ttgaaagcac caaagcctgc tgaagcctgt
     3301 acattataaa acggcacacg ttccatttca tctgcagttt gggctgccac taatgttcta
     3361 ggctcttctt ttactgccgt ttgagcaaag cctaactctt gctgcacgct tattgggaga
     3421 gagctgtagt ggtattcaaa agcaaccccc ctttttccct ctatttgtct tttgagccaa
     3481 ttatttttgg tagctcttct tgttacattt gatggttgtt caggtaaatt tcccattcca
     3541 gctacttcag atgccgtaaa ccattccttt ctaattatag aattcataaa accccttttg
     3601 aattcaagtg gaattcaaaa aaatttacaa acaaattctc ttgaaaatca attagttaat
     3661 taaataaaac cgaaaaacac taaattcttt tgaattctct tattgaattc atttggaatt
     3721 cactatatta ttcgttctgt agttaaatga tttacatcat ttaagtagtt tctaaaacta
     3781 actttcaagg atctcacaaa atggcaagaa ataaaagagt tcgagatatg agtaatttcg
     3841 aaattcgtgg tgagctgatg aaaatcggta agtccttatc tcagttaggt attgagaatg
     3901 gattagcaaa aaccacagtt cgtaatgcgt tagataagcc atatcccaaa ggggagcaaa
     3961 ttattgcaaa agcgattggt aaaacaccgc aggaaatttg gccctctcgt tacgaataag
     4021 gagcttttat gaaggaatgg tttttagcca aagaaatcgc aggattatct ggagttccag
     4081 aattaccgaa tagcgtttca agattggcaa ccaaagaagg atggcaaaaa cgacaaattc
     4141 aaggtgtaag aggtgttact tacgaatacc acctcaccag cctacccatt gaaacccaac
     4201 aacaacttag actaaacgcc gcccttgcgg taataccgca agcggcagaa ctacaaccca
     4261 aacgagacga ccccgcactt atcgcaaggc tcaataatgc caccgataaa ggcagggata
     4321 aagcaaaagg caaggcagaa gcctgtatgc agttgcaagc ctttctcgac caagggttta
     4381 gttatacgca ggcagaagcg ggagcggcaa ccgctaaaaa tgtgtcgcaa ggttctttaa
     4441 aaaattggta ctacaaagtg aaaggtcacc ccgtccattt atggcaggcg atcttaattt
     4501 ccgaaagcgg taggagtaaa aagccgcagc tgaaagccaa gattactgaa gaagcgtggg
     4561 actgcttttt ggcggattac ctccgccctg aaaagccgga tttacgggca agttaccgcc
     4621 gaacccaagc catcgccaag caatacggct ggcaaatagc aagtttacag actttccaac
     4681 gccgagtgtt ggcggaagtg ccttacgagg tgattttgct caaacgggaa ggagcaaatg
     4741 cggttgccaa gttagtgccg gcactacaac gcacggtgaa agatattctc gcaggagaat
     4801 ggattaacgg cgatggctat caacacaatg tgtttgtgaa atggcacacc ggcgagattg
     4861 tccgccctaa aacgtggttt tggcaagatg ttcgcacccg caagatttta ggttatcgaa
     4921 catcgatttc ggagaatact gacagcatac gccacgcatt aatggatgtg atttttaacg
     4981 taggcatacc gaaaacgctc acgctggata acacccgagc agcagcgaat aaggcaatga
     5041 ccggtggtat tgaaaaccgc taccgcttta aacataccga gttagacccg aaaggcatta
     5101 tgccgatttt agggattgat gtgcatttta cctcaattct ttatggtgaa ggacacgggc
     5161 aagccaagcc gattgaacgt gctttcgggc gaggcggaat tggcgagaaa atagataaac
     5221 gccctgaatt aagtggtttc tatacgggca gaaatgcaca agaaacccct gataactata
     5281 acggcggtaa agacggtgtg gattacaaca cattcttgaa agccatagca gcagggatag
     5341 aagagtacaa ctctcaaacc gaacgccata ccgaaatgtg ccgaggagaa ttgagtttta
     5401 accaagtttg ggagcgggat taccacccaa gcaacgtaag acaagccagc cctgaacagt
     5461 tgcggttact gttcttacag gcagaaacgg tcagcattaa acgcaacggc agttttacgc
     5521 tgaaagcagc cggcaaactt tacggcttaa ctaacgttta ctgggcagaa agcctgatag
     5581 ggataacgga taagaaagta gtggcacggt tcgaccccga tgacttacac ggcaacgtgt
     5641 atgtgtacaa cctagagggg caattcttag ccgaagcggt ttgccgagag gcgaaaggat
     5701 ttggtgatac cagtgcaagc cgtgagcaag gtcgcttata tcagaaagta gtgaaaagtg
     5761 ccaaagctca agccgaagcc cttgaattac tggaagctca cgaactggca agcctcgccc
     5821 cacaagtgga cgtgcctgag ccgatagaga agaaggtaaa agaggtgctg gtgaaagaag
     5881 attttatcgt ggatttcaac actgtgcgta aagcaacggt ggtggaagaa accgaagaga
     5941 tcagtatttt tgatgaagtg ttactgaaac aagagaaaca acttcgcata gtggaataac
     6001 tagcggtcag tttttgcaaa aaatttgcaa atttttctaa aaaaacgacc gcttgaaatg
     6061 agatttaaac agggtttaaa cgcctttaag gagtaaaaaa tgacattaac agggcaagct
     6121 taccgagtga ttttcaagga actcaaagag caacaagaga gtgaatttga acaggctttc
     6181 aagaaaggga ttgccaaaat tcagcagaat caaactcagg aatccattct ggtaaaccgt
     6241 gatatgtttc aagctgaaaa gctaacactg ctttcacaaa agttggaagc ggttgagcaa
     6301 ttacttcgcc ttgaattaaa tcagccgaat tttcaagcaa aacttgaaga ctacgctgac
     6361 gcattacgaa caaccatttt aagtaaagta gccaaataag agctttagac tcttgaaggc
     6421 ttaacatctg agccactttt tttactgtcg gcattatacc gtcaagatca tcaatagaag
     6481 ttaaatgatg aaaagaggaa tggtattcag ctaaacaaaa attgattgta ctaagtttaa
     6541 acaaagtaat gcaatttttc atcacgatgg catttgctcg ttttaactta aaaccagaga
     6601 aggttgcacg agcagaatca agggctattt gatgaatttc atcatctgtt aaagaacgaa
     6661 agagcataaa aacctccaaa caaaaacagg acaccattat gacattaatc gaccaaatta
     6721 aacaacacat cgccgaaagc ggcagttctc aggggaaagt tgccaaagaa gccgggatta
     6781 atgccggggc gttatcggct tacctgaatg aaaattacaa aggcaataat gaagaacttg
     6841 aagcaaagct gattgcttat ttagagcgta ttgaggcgaa gaaaagagag tttgtcgaag
     6901 ctccgagttt tattgaaacc aaaaccgcaa accaaatttt cggttcgtta cgatttgctc
     6961 aaaatactgg cgtgcttgcc attattcacg gtgcgagtgg cgtgggtaaa acacaagcgg
     7021 ctagagagta tcgtaaacgc tatgcgaatg tatggttggt taccgcaagc ccttctcgtt
     7081 cctcattaag tgaggtgtta tatgaaattg ctcttgaact tggaatgaac gatgcaccac
     7141 gccgcaaagg gacattggct cgtttaattg ttcgcaaaat gaaaggcaca gcaggtttat
     7201 taattattga tgaagcagac catttacctt acgaagcctt agaagaatta aggctgttac
     7261 aagaagaagt agtgaatgaa agtgacatcg gagctggtgt tggcttagtg ctgattggca
     7321 atgacaaagt ctacacccga atgaaaggcg gaattaaccc tgctcacgaa tatgggcgac
     7381 tttggtcacg cagtgccaaa cgcaccagta ttcagaaaac caaaaaagaa gatacccaag
     7441 cggtagccaa agcgtggggg ttgagtgaaa accaagaagc actcaaggta atgcaagcca
     7501 ttactgaaac tggtggcgga ttacggattc tgacacacac cttacgatta gcagcgatgg
     7561 tagcaaaaga ccgaatgatt cccttaactg ccgatttaat tcagctcgca cgtaaagatt
     7621 tactctcaac aggagattaa caatgagaac cccaaaaccc aaacacagtt ttaaccgcac
     7681 caaccaagca gcgtgccgtt ttttaaaaca aacccaaaag gcaattatcc gcttaaacag
     7741 tcttggcttt acggtgctga atattgattt tacccgtatt aagccccgca ttgaggtgga
     7801 aatcggcaat aacaagcaca ttgctcaagg cttgatttat gagggtaaag cctaccgcta
     7861 cagcttcggt aaaagcgaag atttaggcag atgggaaggc tactacacca tgctggaagg
     7921 tatcagagtg tggtggcgac aagcagcaat tcactaggag aaaaacagat gaaaacctta
     7981 gcactattaa ccgccctttt agggcttgta gggtgtgatt tagtccaaag caaacaagct
     8041 aaaaattaca tcggcaacaa tttaactgaa atctgtatag ataacgtggt gtacctgatt
     8101 tattccggtg ataaaaaagg cggaattacc ccgaaagtaa ataaagattt ttacccttat
     8161 acctgtacaa acaaagagga aagacaaaat ggcaaaaccc gatgaaacac ccattacaaa
     8221 agcagaatgt caatctcagc ttgcagagtt gggggtgcaa tataaaaaac tgccaatggc
     8281 aattacaaga catatttgta atgccacaac caatatacac ggcaaagtta taaaggtcag
     8341 tgtggtagag agagttggat atggcgtcca gattaccgca caaggtaacg agaaatcttg
     8401 cttagtaacc tatgaagcaa tgttaggtat ggcagaagca atgggattat ttgatgaagt
     8461 taaggagcaa aataatgact aaaaaaacaa ccagagtaaa aagtgcaacc caaagtgcga
     8521 tttatcaaag ccgagatgaa gtgcaagtgg ctataaaaat cattggtgat aaacagcgtg
     8581 aattgcaacg tttagctacg gcaatgaatg atgaattagc tgctattagt gccagttatg
     8641 ctcaacataa ccgctaccaa cattatgccg agaaagcggc tgaagcagaa cgcaaaggca
     8701 actataagga agctcaagac cattgggaag ttgcaaaatt atcagcaaaa aagaccgcta
     8761 accgagactg ggcggaacaa cgagcggaat tttgtaaacg tatgcacaat aaaccgtttt
     8821 agggggaagt gatgacagaa accgtaaaag cacaacttaa cagccaatta aatgaggcaa
     8881 ttatccagtt gatacaagct caaaagtatt taaaccaaga tgatgccatt cgcagtggag
     8941 tgtatatcgg tacggtgcag gatttattgc caaaggtgca tttaaagtta ttaacggcaa
     9001 atcgtaaaca ttgatagaga tgaggtaaaa atggctatta cagaagaaca atggaaagaa
     9061 attaagcaaa agctagatag tatcataggg agagttaaat ttagatacaa agagcattta
     9121 ctcacggtag atgttgtaca aattaagcga tctttaaaat tggctgtgta tgttgatggg
     9181 gaaattgatg gagcttggac aaaagaagga cacgaaattc gcccttattt agaagaagtt
     9241 tggtatcgca aagaacgccc tttttttaat gctaaggaga agaaagagta tagaggttta
     9301 atgagcaaaa aaaaactgaa tgaaaaaata gtaacctact cacctatgtt tccatcacca
     9361 actgcactga ctcgtcaata taagaaacta gatggcttag agttgattga agtgatttaa
     9421 aacccattta cagcccattt aaccccgagt tatttaaagg acaacaaaat gaataaaaac
     9481 gaatttttta agaaatacca cctagagggt tcactagcta ttttggattt ggatgcaaat
     9541 gacgatcaaa gccaattctg ttaccaagca ttgttggagt atagagaact cccgttagac
     9601 acatttcttg cagagtactc agatgatgag gatatgacag agtcagagtt tattgagtta
     9661 atgcttgatg aattagagtg gattatccgc agagctaaga atgctaaacg gtttgttaaa
     9721 aaacgacaaa aaacgatgag ggaggaaatt atgtaacagc tcaacccaac caacgccaca
     9781 tcatccgtct agctgagaaa caggtgtggc gtttgtttta agtgggcaat caaaagcgat
     9841 aacgttttta attgtttatt tatcggagta acaaatgaca gacaaagcca agctaatcca
     9901 gcttatccat attgccaagt cgcaactagc aatggacgat ttaagctacc gtgaaatgct
     9961 gaaacggctc accaataaaa ccagctcgac caaatgcacg gtggtcgagt tgcacaaagt
    10021 cttacacgaa ctgcaaacca aaggagcaaa agtaaaatat tttgccaaac gcagcaaaaa
    10081 accgaccgct tacagcccgg caacagggga aacagcggta aaaagccaaa ttgctcataa
    10141 aatccgagcg gtatggataa caatgggcaa acacggattt ttaaacgacc caagcgaaaa
    10201 agcattaaat gcttatatgc gtaaggttat caataataaa actagaccaa caatattatt
    10261 aaatgtctct gcattagagg ctggagatgc aagttatatg cttgaaatcc tcaaaaaatg
    10321 gcataaacgt gtgatgatta aagccctaag caaaagttgc acagttgatc caaagataag
    10381 ctacgatgaa ttagtggagt ggtacaatga agttatgtag atgcccgatt tgccacagtg
    10441 atatacacct agaagctctc gtagaagatg aagccgggcg tgaactactc ggcaaaatca
    10501 gccaattaac acacggtgtt gctcaaccga tggttgctta tttaggctta tttaaaccgc
    10561 aaaaaagtaa ccttaataac tcaagagcct tgaaaatact caatgatgta ttagcactct
    10621 acccttgctc attgctactg gctcaagccc tatctgaaac ggtagtaagc atacgcaaaa
    10681 aacgtcagca agcaatggaa aacgggcaga aaattgaacc gctaccgaac cataactatt
    10741 taaaatcggt gtatgaaacg caaaaagtcc attttgctgt ggtgagaacc ggcaaaaccg
    10801 aacgcgaaac aatgaaagcc gaactggaaa aaacacgcaa tgcgattgcc tatgtgcaac
    10861 ggtttgttga tttaggacgt gaagaggttg ttaaaaatag ccctgagtat cagatttggt
    10921 tagctcataa acccaaataa cacaagccac caaaaggtgg ctttttaact ttttgaaagt
    10981 gcgataaaac ctgatttaaa caggctttaa acgggtttta agattgagtt taaaaaaata
    11041 tttcacaaaa taagaatggt tttttataca ataaccgaaa cggtttttgg ataggaaata
    11101 gacaatggaa ttagtggata tttttgaaga aaaagccccg gaagtgttaa ccgatttagc
    11161 caaacatatt gaagtcgcat tagaagaaaa atgccaattt agccccgaaa aggcaaagca
    11221 aatcggtatt gatattgccc aacaaatggc tcaaaactgg ggtggcgagg taatttatat
    11281 tcctcgcaat ttgttgatgg ctcttaatga gcgagatatg aaaatttacg aagagtttaa
    11341 cggtaacaat caccgtgaat tggctcgtaa gtacaatgta tcaatgcagt gggtatataa
    11401 aattgtgaag aaagtccata aggacgaagt tgcccgcagg cagatgagta tgtttgagat
    11461 gtaaatcatt ttttcccagc cctgatcatt ttcagggctt tttgtgtatt aaaagaacgc
    11521 agtctttaaa cccgtttaaa atcaattttt cagcaaattc tttaaactcc ttttaaagca
    11581 attttaatag gagtgtgcta tgtctcaaaa tcttaccttt cgccaaattt ttgaccgttt
    11641 aatcggacac gagggcggct atgtcaatca cccacaagac ccgggcggag aaacccactg
    11701 gggaattacc aaacgtaccg cggttgctaa tggttatatg tatgcaatga agaatatgac
    11761 ccgtgagcaa gcctaccaaa tctacgaaaa agccttctgg caacgttatc gttgtgcaga
    11821 gcttaagcca gcagttgctt atcaattttt cgacgcagtg gttaatcacg gttttggtaa
    11881 tgctagtcgt atgttacagc gtgcagtagg cgtagcggat gatggcatta ttggcaatat
    11941 taccctgcag gcaattaatg caaaatctga aagcgatctc ttaatgctat ttaatgccga
    12001 acgtctgaag ttttacacaa aattacgcaa cttccccact tttggtaagg gttgggtcaa
    12061 tcgtgtggca ggcaatttag aatacgcagc acaagataat gaggtttaaa aatggcaaaa
    12121 ctatttaaag aactactctc aaccaatggc acattatcca ccactagcac cgtgcagttt
    12181 tttggcacat tgtgtgtatt tggtttaatg gtttatgcag taattaccca acaaccttat
    12241 gccgaaagcc tattaaataa tgtgttgatt tatctttttg gggcaactac cgctaagggt
    12301 gtagtaacca gctatcaagc caaaattaaa gggggtatcc ataaacaaca aagtacattt
    12361 aaagaggagg agggatgtta atgcaacaaa ttttaggcgt gattggcgtc atcgcagcaa
    12421 tattgtctta tgctttgttt aaaagctggc aactaaaacg tgagcgtaaa aagaatgcca
    12481 tattacaagc tgaaaaacag caacaagcgg ttgaaattga gcaaaaaaaa gcagaggtaa
    12541 aatatgtgta tatatcaaag aaaaacaatg aaaaagttac tcgcagctct gctagcgata
    12601 ttgatgacaa gttgcagcaa cacggttact tccgtgacaa caacaggttg cacggcgttc
    12661 agtctgattt atccgaaccg tgcggatacg ctggaaacga aacgtcagat tcttgctcat
    12721 aatctgactt ttgaggaaat ttgccaaaat gaaatacatt aaaaaattac gtaaacgctg
    12781 gcaaatttgg cgttttttaa aaaatcatcc tgaggttgca caacgccgag atttattagc
    12841 gattgccatt aaacagggcg tagaaaaccc tgtagggcgt gcaagacgga gggagccata
    12901 atggatttat ttacagtctt ttgggagtct atccgtgcta actttggttt tatttctgcg
    12961 ttactcacca ttgttgttac ggcattttgg ctcaagctag atagcaaata cgccaagaaa
    13021 aatgatcttg gtgaattgct ggaaattgcc aaaagccacg ataaccgctt aaccacctta
    13081 gaaaccaagg tagaaaacct gccaagtgcg gtggacgtgg aaaagctgaa aaccttagtc
    13141 actgatgtaa aaggcgatac caaagccacc tcaaagcagg tggatagtat cagccaccaa
    13201 ctcggcttgt tattagaagc aaaattaaag gaatgatatg tcgttaagag atttactcac
    13261 tcaagaccaa cggctggtga ttttacgctc attagcggaa gccggctatg atgccaatga
    13321 gtcaattatt agtgattgcc tagatttata cggtcacgat attagccgtg atttagttcg
    13381 cacccattta agttggcttg aagagcaagg cttacttacc ttagaacgtt tgcgagatgg
    13441 ctatatggtg gcaagcatta cccagcgtgg cttagatgtt gctcaagggc gtgttgtggt
    13501 aagtggcgtt aaacgccctc gccctaaaat ttaaacggta tttaaggagc gtttaaatga
    13561 gcgagaaaaa tactcgtggt cgagcatcaa aagtcgattt actgccgccg aatattaaaa
    13621 cccaactggc gatgatgttg cgtgataagc agtactctca gtcacaaatt ttagaagaaa
    13681 ttaatgactt aattcgggat tgtggcttgc ctgatgaaat gctgttaagc aaaaccggat
    13741 taaaccgcta cgcaagccgt atggaacgct taggggcaaa aatccgtaat gcccgggaag
    13801 ttgccgaaat ttggactaag caattcggcg aaatgccaca aaccgatatt ggcaaaaccc
    13861 taatggaaat ggtcaagcaa attgcctttg aaacctcatt gaaattaggc gaacaagaag
    13921 gcggtattga gccaaaacag cttgctttgc tctcgtctgc tattcaacgt ttagaacaag
    13981 ccgaaagttt gagttttaaa cgggaacagg caatccgtaa agaggtcgca caacaagccg
    14041 ctgaaaccgc tgaaaaagtg gtggtgcaag cgggtttatc cgctgaaacc gtccgtacga
    14101 ttaaagagca aattttagga attgcataat ggcactactc aataacagac cgctgaatga
    14161 attagcccct gaatgccgtt cgtttttaga gagcattcac gcttttaatc ctaacgaact
    14221 gttattgggc tatcaaaagc ggtggattgc ggacgacagc caactcaaaa ttgccgaaaa
    14281 aacccgccgt tgcggtttaa cgtgggcaga agcagcagat aacgccttaa tcgcaagcac
    14341 ccgcaaatca gacggtggct ctgatgtatt ttacattggc tcaaataaag agatggcacg
    14401 tgaatatatc gatgctgtcg caatgtgggc aaaagccttt aatcgtgtgg ctggagaaat
    14461 ccaagaagag atctttgaag acgaagataa agacatctta acctatgtaa tctacttctc
    14521 atcgggtttt aaggtcaagg cattatccag taatccgaaa aacctgcgtg gtatgcaggg
    14581 cgtggtggtg attgatgagg cggcattcca cgaatactta gcggaagtct tgaaggcggc
    14641 gttagctctc acaatgtggg gggcgaaagt ccgtattatt tcgacccaca acggctcgga
    14701 aaatctgttt aatgaactga ttaccgatag ccgtgccggc cgcaaacgct actctgtgca
    14761 tacgattacg attgaagatg cctgccgtga tgggctatat caacgtatct gccaagtagt
    14821 gacgaaaaaa acgtggtcac cggaagcaga aaaagagtgg attgaaaacc tactcaacga
    14881 caccgccagc gaagaagacg cattggaaga atacttctgc gtaccgaagt tcggctcagg
    14941 cttatggctc tctcgtgctt tgattgaacg gcagatgagc gaagccacgc ctgttatccg
    15001 ctttacggca aaagatggtt tcagccttgt ggctgaaccg acacgctatg cggagattgc
    15061 cgaatggtgt gaattagaac ttgagccgat attggcaacc cttaaccctg atttgttgca
    15121 ttttatgggc gaagactttg cacgcagcgg cgatatgacc tctctggtgg tgcttgctca
    15181 gcaacaaaac cttgttcgta aagtcgcctt tattgttgag cttggcaata tgccctacaa
    15241 gcaacaagag caaatcgtga tgtttatgct taaacgctta ccgcattttg ccggtggggc
    15301 ttttgacgcc cgaggcaatg gtggctattt agccgaagct gcacgagatg aatttagcac
    15361 cttgattgac tgcgtgcagt tatcggaaaa atggtatcgg gaacacaccg ccccctttaa
    15421 agcggcattg gaagacggcg agctggaagc tattccaaaa gatgcggata ttttggctga
    15481 tttgcgttca tttcaggtgg tgaaaggcgt accacgcata ccggataaac gcactaaaag
    15541 tgcagatggg aaaagcaaac gacacggtga taccgcaatt tctttgctgt tggctcatta
    15601 tgccagccga caattagtgc aaatgccagt tgagccggta tcacgccgtc cacgccatag
    15661 ccaacaatta acagaaggat attaacaaat gagatatgta ccactttgtt taatgatgtg
    15721 tgcctcattc tacctattta ttaacaacat tgacggctgg ggttggggaa ttcttttatc
    15781 ttttatttta gcgagtgcag cttatggcaa agaagaataa tttaattagt gaaattgcca
    15841 cccgtgccag aagtattgat tactgggcat ttggctatta tctgccgaac cctgacccga
    15901 ttttaaaacg aatggggaaa gatatttccg tttaccgtga gttgttatca gacgggcaag
    15961 ttcgctcagg cgtacgccgt cgaaaagcgg cgattaaagg cttagagtgg cgaattacca
    16021 ccactaacaa tgagaaagtg gacgagcaga tttatcaaat atttaaccgc ttgccgatga
    16081 ataacctgat taccgaaatg ctcaatgcag cactctatgg ctaccatatc agcgaggtta
    16141 tttgggcaaa agagggtgag ttatttgtgc caacagaaat cattggtaaa aagcctgaat
    16201 ggtttatgtt tgacgacgaa aacctactgc gtttccgtac caaagaaaac tgggcggacg
    16261 gcgaattatt accagatgat aagttcttgc ttactacgca agaagccacc caagataatc
    16321 cctacggttt aggcgattta tccctctgct tttgggcggc gacctttaaa aaaggcggtt
    16381 tcaaatactg gttggaattt accgaaaaat acggctcacc gtggttgatt ggcaaacacc
    16441 ctcgccaagc tcacaataca gataaagagc gactagctga tgccctagag ggaatgatta
    16501 gctcagcgat tgcggttatc cctgaagata gttcggtcga aatcaaagat gcagcgggca
    16561 aatctgccag caccgatgcc tttgaaaagt tcctcaattt ttgcaaggca gagatcaata
    16621 tcgccctact tgggcaaaac caaaccaccg agcaagaaag caaccgtgcc agtgcacaag
    16681 taggcttgga agttatggaa gatattcgct cggacgacca agcgatgatt gaagccacct
    16741 tcaacacctt gttgcagtgg attgtgaaat ataacttcaa tgtggaacaa ctgccgaagt
    16801 ttgaatttta cgagcaagaa gccatcaaca ccgaccaagt tgaacgagac agtaaactcc
    16861 acgcaatggg cgtgcgtttt tccaaagcct actttgagcg tgaatatggc tttgaggcgg
    16921 gtgatattga ggtgcaagcg gtcgaaaaag cggaaaaatc tgcaaatacc acagaattta
    16981 gcgaaggaca acgccgaacc caagtgccaa tgcctgtgcc aattttggaa cagctagaac
    17041 acgagggaga agcaatggtg gacgattggc tacaaggggt gagagataaa ctcgctcaag
    17101 cagatagtct ggaggatttc caaagtcagc tagatagcct tatccctgaa ttaagctttg
    17161 ccgaatatgg cgagctgttg gcgttaggct caacggtggc agagcttgca ggcagacaat
    17221 cggtaaacga tgaaattaag gcaaaacgca atgcgtaaat ttacctttaa acagcaagcc
    17281 caatattttg agaaaaaact caatctccgc acgaatagct accttgatat tctgggcgaa
    17341 gagcacgact attttttcgt ggtggctggg gcgaatcgta atgaagtgtt gagtgagttt
    17401 cgcaaggcgg tggatgaggc tattcacaac ggcgaaacct tagagaactt tcgcaagcgg
    17461 tttgatgagg ttgtggcaaa aacaggctgg gagtacaacg gcggacgaaa ttggcgaaca
    17521 cggattattt acgataccaa tgtttacggg gcgtataacc gtggacgttt gcaacaacat
    17581 ttagagcttg cggaggatat gccttattgg gaatatcaac acaacgacaa cgcccaccct
    17641 cgcccacagc acgtggcgtg ggacggcttg gtgctgcgtt atgacgatcc gttttggaaa
    17701 tatcactatc caataaaagc ctacggttgc cactgcaccg tgcaagcgtt agatgatttt
    17761 gacctcaagc acgatggtaa aaccgtcagc ccaccacctg aaattgagtt tgaacaaaaa
    17821 acggtaggcg tgcggacagg caattcacga gtcgtaactg tgccgaaagg ggttgatgtg
    17881 ggttttacac cgcataattt tgataatctc aaagccggga gagcagcaaa tgtagataag
    17941 ttgctaatgc aaaaaatggt taccgccgat cctatatttg cctccaaagc agtcagtgat
    18001 ttattggcaa aagagccggt tgcaaagtta cataaccaag cctttaaaaa ttgggtaaat
    18061 gatgttgcca atgctaaagg aagtgcatta tcccaagtag agaatatgca gttgttaggg
    18121 gtactacctg ttgcggtgat tgaacggtta cagcagatca atttagctcc gcaatctgca
    18181 attattgcaa taacaaaagg cgatatggta cacgctctac gagagctaaa acaaaatacc
    18241 ggtattgccg taccgttgga attttgggaa aagttgcctg caaagttaca atacccaaat
    18301 gccatcttgt tggaaaaaca acaagcagaa actacattgc tctttatcta tgacgtagct
    18361 caaaccaaaa ttgccgtaaa agtcaattat gatgcaactt tacaagatag acacggagca
    18421 aaaggacggc agaaagtctt actgaatcga gcggttacag gtagtttatt ccaagataca
    18481 actggattga aaagttcaaa gtatgaagtg ctattgggag aaatgtagcg gcgaaggact
    18541 cgaaccttat aatgtaggtt aaacctacaa cctttaccaa ttaggaaact accgctacat
    18601 tgtgtaaatt cactataccc ctaaattatt ttttaatcaa taggagaaac aaaatggcag
    18661 aaaaacaact ttcctttaaa gtagccgaaa tagtgccaat gtcagctatt aacactatgc
    18721 ggcacttaat tagtttggca ttacaagcga attatgagag agaaaaatct cgtgcttgat
    18781 aatttcaatg gcttgtagtt cgggaactat attatctgaa acaagccatt gttttgttga
    18841 tgtcagacat ttagcgatga aatccataat taaaccatta gcagtagctc gttgttccgg
    18901 agtaagttgt aaccacgacg cctctgtttg ttggtctaat gtataaagaa acataacggc
    18961 ttctttttct gataatgggt caagtggtaa tttttcagct tttgtgacta accattgacg
    19021 ggaaagcaat aaatcataaa ccagttctat tgcttgttct gcatttacca tcatattcta
    19081 attccttaat atatcagggc aacattaccc aatctatatt ttactgagat ttgcttaatg
    19141 atcaaaatca ccctcaacaa cacccaagcg gtcaaatcgt tacaacaaat tgcaaatcag
    19201 ctggaacaac ctcgccgact gtatggcatt ttaggggaaa ccctaaagaa aattcacact
    19261 gcacgcttta aagcggaaca agaccccgat ggcaacaatt ggaaaccgtt agccagtagc
    19321 acgcttgctt taaaacgtaa acgaggtaag tccactaaaa tcttacggca agacggctac
    19381 cttgccgata aaacggctta caatgttaca agtgataatg ttgagtttgg ctcgcaggaa
    19441 gtgtatgcac ggttgcatca attcggcggt aaagccggac gaggcaaaaa agtgactgta
    19501 ccggctcgcc cgtggttagg cgtaggcgat aaagatgagc agttactttt acgcaaagct
    19561 gagtggcatt tagggcaaat tatcggtcgt atgggaaaat aaccgcttaa aatcaaattt
    19621 aacgcataaa aacgcctctg tgcgttttta ttttttattc gcctgattat tcgactcaaa
    19681 aaatttaaac gctgttaaac gcatttaaac ggtatttaaa cggtattgcc gattgtgata
    19741 aatcctcttt attaaaacac cctcgaaaaa tctttaaacc agtttaaaag ctaatttctc
    19801 tccaaatcct tattattgcc ccatcacgga ggcaatatga cccaaattga aatttttaaa
    19861 gccggtaagc gttatgacgc caacggcacg ttaattgaca ttacccctga aatgttgcaa
    19921 cagaccgttg ctgcctataa ccccgaattt cacgaagctc cgctggtgat cggacacccg
    19981 aaatccaaca accctgcgtg ggggtgggta aaagcccttt cccttgaggg cgatgtacta
    20041 aaagcagaag tagatcagct agacgctgag ttttcagaaa tggtggcaag cggcaaattc
    20101 aaaaaagtct cggctgcttt ttacttacct gatagcccga ataacccaca taaaggcgtg
    20161 ttatcgctac gccacgtggg gtttttaggg gcaatgccac cggcggttaa aggcttaaag
    20221 caggtggaat ttgcagaaga tgatgatttt gtcgtctttt ctgaatgggg ggttgcaagt
    20281 ctatttagtc gttttcgtga ttggttggtg agtgagttcg ggcttgaaaa agccgataaa
    20341 gctcttcccc cacacgaaat tgattggctg aaagaagagg caatgcgaag ccaaattagc
    20401 aaacaggtac acgccgaaca ggcaacacct gaaccgattt ttaatgaacc cgcacaacca
    20461 gaaggagaac ctgaaatgag tgcagaagag aaggaagagc ttgaacgctt aaaagcggaa
    20521 aacgagcagt tgaaagccga aaaagcccaa gccgaagcag agaaaatgga agcagagctg
    20581 gaagctgaaa aagctggtaa tgcagagttt tgtgaaggtt tagtcaagca aggcaaactt
    20641 gccccggtgg caaaagcggc gtttgtgcag gctttaaata acctttcagt attaaaagcc
    20701 ggtcgtgagc cggaatttaa tgagggcgaa gatgtggttt cacagtttaa gtctgcaatg
    20761 tcgcaatcac cacagattat ccaatttgga gaatatgcca cagcagataa agccaaccca
    20821 caagaagcgg aagcagtgga atatgctgaa ggcacagatc cagtttcgat tgaagccgac
    20881 caaaaagtgc gagcttatat gaaagcccac aatgtaggct acgctgcggc atttaatgcg
    20941 atttatcgct aatgtttaac ccacaactga aaaggaatac taatgacaac tcataactta
    21001 caaaaactgc gtgtacaaga ccccgtttta accgagctgg cacaaggcta tcacaataac
    21061 gagctggttg ccgagacctt aatgccgact gtcgaaatcg aaaaggaagc aggcaaaatc
    21121 ccaactttcg ggcgtttagc tttccgattg ccttctaccg tgcgtaactt gcgtggttca
    21181 tctaaccgtt tagatccaga agatattggg gcgattgatg tggcgttaga agaacacgat
    21241 gtggaatatg ccattgatta tcgtgaagag aacgaagcca ttttttcttt acgtcaattt
    21301 gccttaaata ccacccaaga tgtgattgcg ttaggtcgtg aaaaagcggt tgcaaccctc
    21361 gccttagatg aaagccgtta tgaaacagac aataaagtca cgctgtccgg caccagtcaa
    21421 ttcagccata aagatgctga tgtgtttaag gtatttgata ccgctattcg tgccgtgaag
    21481 cgggctatcg gtcgtaaacc gaatgtgtgt gtgatttccg gtgatgtgtg ggcagcgtta
    21541 aaagaacatc cggcagtggt tgaaaagctc aaatacagtc aagtagcgat tgttacccct
    21601 gaggtgtttg ccaaactgat cggcattgag accgtaaaaa tcggtgaagc ggtgtatgaa
    21661 gaaagcggtc agctcaaaga tatttggagc aaagatattg tggtggcgta tgttgctcct
    21721 cgttcgaccg gaggcaaagg cacggtttac gagccgtctt atggttacac ggttcgccgt
    21781 caaaaaggct tatttgttga tacttataaa gagagtggcg gcaaaattga agtggtacgc
    21841 acgaccgata ttcacaaacc tcatttagtg ggtgcggcag caggctattt aattaaagct
    21901 gccgtataag ccacatacca tagggtgcgt ttactaacgc accattatct caaacacatt
    21961 acatagagga aaaaacgatg gctaaattta ttgttttaca taccccaatt ttacacgatg
    22021 gcaaacgcta tgaggtgggg gcagaaattg aactcaccgc tgaacaagct gagaacaatg
    22081 cgatcaactt aaaagcggta gaagctgttc caaaaccacc taaaaatgcc tcaaaacctg
    22141 aagatgagcc aaaacccgaa ggtgaaccta agcctgaaga tgcagtgacg gaagatgatg
    22201 tgaagctggc tgaagcaaaa attgcagaag cagagcaacc aaaagggaat aaaaaataat
    22261 gtatgtgcag attgatgagc tactcacggc gtttagtcgc aagattgtgg tgcagctcag
    22321 taatgatgaa ccgacagcga ccgagcctga tttaaagatg cttgaaacgg cagttaaagt
    22381 ggcaaatgag cgaattgatg cagcgttacg ctctcgctat accttgccgc tggctgatgt
    22441 gcctacgctt attaatcagc acgcattaac ccttgcccgt tattggcttt atgcccgccg
    22501 tcctgaaacc aaaatgccgg acaccgtgaa ggaaacctac caacaagcgg tgaaagagtt
    22561 ggaacagatt gcaacaggca aactgcattt aggcattgct gaaagcagtc aaattttaga
    22621 agacgatgtt ttagccgata acagtgaata tgaagttcgg gcgaacgctc gcattgatac
    22681 cagtcgttat taaagattat gtcagccaca caaccgattt tagaagatat ttgccaacac
    22741 ttgcggcaag cattgcccga gtgggaggtg gaactcttcc cgaatgaccc aagcacctat
    22801 catctctcgc acattaacgg tgcggtgttg attagctatt tggcaagcaa atttgagaaa
    22861 cctcgcacta cacaagcggt gctgcaggtt cgccacgttc agattgcttt aacggtgctg
    22921 acccgtgatt tgcataatga tgtcggggcg ttggatttgc tggataaatt gcggttattg
    22981 gttgtggggt ttaagcctca aaactgcggt gagtgttggt tgattgatga attttttaat
    23041 ggctcaagcg aagaaaccgg gctttggcaa tatcagttga ttttgcaaac cgaaactcag
    23101 caggtgcaac accaagcggt cgaaaatctg ccaaaatttg taaccgctca tcttcgccgt
    23161 caagaccagc ctggttcgcc cggacttaaa acttaaatcg tagggtgcgt ttgctaacgc
    23221 accatcaaca tcacctgatt ttacggtgcg ttggcaaacg caccctacaa ggagaatatt
    23281 atgacgtttc accacggttc tgaaaccgaa cgagtaaacg gtggctctgt gccggtatcg
    23341 gtggttgata gtgccattat cggcattgtc ggtactgccc caatcggcgc agttaatgaa
    23401 ttgaccgtct gtttaaccaa aaaagatttt gccaaattcg gcacgatttt aaaccaaggc
    23461 ttcaccttac ctgatgcctt tgatatttta gctcgttacg cagcgggtaa agtgtatgtg
    23521 gtgaatgtgc ttgacccttc ccgccaccgt actaccgtga ccgatgaagt cctcacactg
    23581 gatcgcaata cgctgaccgc tcaaacagcg aaaaccggca ttattgcggt gacgagagtg
    23641 aaagacggtg caaacgtgct gaatgctgat cggtattcgg tcgatctgca aaccggcgtg
    23701 gtgacctttg tctctgcacc gtctgccccg aaaattagct atatctatgc tgacccgagc
    23761 aaagtgaccg aagaggacat taaaggcggg gtggatagct taaccggtaa acgcaaaggt
    23821 tttgaactat tgcgtgatgg ttttaacctt tacggtgcgg atgccaaaat cttaatctgt
    23881 ccggaatttg ataaaaccgc aagctgtgcc gctgcccttg ccacccttgc cgaccaactg
    23941 cacgctaagg cgtatattca actgccgaaa gggacgagct tatcaaaagc tattcaagga
    24001 cgtggcccgg cagggacgat taacgcctcg gcaagcaatg agaacgtacg ccatttcttc
    24061 ccgtatgcgt tggggtcaag caatactctt gaaagccttg cgacccacgc cgccggtttg
    24121 cgtatgttga ttgatgtgga gaagggctac tggttcagca cttccaataa agagctgaaa
    24181 ggggtgatcg ggttggaaat tccgctgacg gctcgggtgg acgataagca aagcgaaact
    24241 aatctgctca atgcggtagg gattaccacc attttcaata gttttggcac aggcttccgc
    24301 ttatggggca accgttcgtc taacttcccg actgtgaccc atatcagcaa ctttgaagtc
    24361 gcctctcgca caggcgatat tattgatgaa agcattcgcc aagccgaatt gcagtttatt
    24421 gatttaccga ttgatgatgc gttgctggat agcttccttg aaaccatcga cactttcctg
    24481 cgtacgcaga aatcgttggt aggttattcg gtgagcttag actatgaata tgacttggtt
    24541 gatgcattca gccgtgggca agtcccgatt gtgtatgaat acactcctaa aattccgggt
    24601 gaacgtatca gcaataaatc tgtgatgacc cgtaaatact tggcaaactt ggtgtcgcaa
    24661 cgataagggg aaataaatga gtattgcaat taaccaaatt gtaaacggaa atgtttacat
    24721 taacggcaac agccaaatgg ggcgagtgaa tgaggtcaaa atccccgata ttgagtttga
    24781 atttatcgaa cacaaaggcc ttggaatgca cggtgtgatt aaattacctg ccggcacgaa
    24841 tgcgattgaa gcagaaatca cttgggacag tttttatccg gaagtgcgtg cggtaatgct
    24901 taatccgtat aaatacactc agttgcaaat ccgctctaac ctgcaagtgt ttaactcgca
    24961 gggcttggca gccgaagagc cgatggtcac cattatgaat gtgtctgccg gtaaaatcgg
    25021 cggcacaggg cataaaaaca aagaaaatgc cgaatttgcc gacacgttaa atgtacattc
    25081 aattaaacag accgttgccg gtcgtgagct gttatttatt gatgtgctgg cgaatatcta
    25141 ccgtgtgaac ggggtggatg tgttgcaaaa attccgcacc aatatcggtt agtaaaatct
    25201 ttaaagccgt ttaaaatcaa tttaaacacc gtttaagtaa actcctttgt gaagttaaac
    25261 aacaaccact cacaaaggag tttttttatg gctaacgcag ctcaacaagt attaaccaat
    25321 cttcgtgtac aaaccactta taaattgcaa taccctatcg ctttaccaga tggtagagtt
    25381 attgaaacct tagatgtacg tcgtccaaaa ggtaaagatt ttcgtttgct tgatgaaaaa
    25441 gggtttgacc ctgaaaaaga tggcgtaaaa attctacgct tctatattca acagctcacc
    25501 acacttgtgc cggaagatat tgatgaactc gatgctgccg atattaaggg cttaaataac
    25561 ctattggaag atatgcttat tgagggaaag tccgacaaat aagtgaacta gataccgttt
    25621 atgctgatct cgcttggtgg tttaagtttt caccaagcga gcttttagaa ttggatttag
    25681 tggatattcc gaaatgggta gaacagatga acaggcaaat aaaagccggt tatgggcaga
    25741 ttttacggta gagccaaata aagggttcgg tggctaaagt aagtaaaatg gcgacgcccc
    25801 aagctagata cacaccaacc cacgccaaga ttgtcaaaat caatccataa atgagtacaa
    25861 aactaacgcc ctcgcttagg ctttgtatag attgaatcgc atctaaccag tagaagatac
    25921 tccaaccgac taatgctacc gctaacaacc atttagcggt gcattctgtt cttgttacac
    25981 aagcctcgaa accagcccac tcagtaattc gattatttaa tttagtcagc atacaccacc
    26041 tccttaaact ttccctattt tacgctaagg atttaaccaa tggcaaataa tttagctatc
    26101 ggaatggtaa ttggtgcaag cctatcatca ggttttcacg gtgctttttc aggagcaaag
    26161 aaaaagctag aacaattaga acaggctgtc gctaaaaatc agcaaagcca ttctaaatta
    26221 ggttctgagc ttactgcatt gcgtagtaaa caagctactc tctatgcaga aatgagccga
    26281 gccagtagta aaggtggtgc tgggcttgct cttatgcaac aggaatataa aaaaattggc
    26341 aaagaaattg ccaatattag ccgagagcaa cgcaaatgga gtacagaatt agaaaaatct
    26401 attgctaagc aaactaaatt acgcaatgca atggaacgtc atacacaagc taaagaaaac
    26461 cgagacgagc ttaaagggaa aataattgga acggtagctt ctgcggcaat gggtgtcggc
    26521 gtgatgaaaa cctatatgga gcaagaagaa gctgcgaata atcttaaaat ttcaatgctg
    26581 aaagcagatg gttctttcgg gaaatttgaa gagattggca agattgctga cacattaggg
    26641 acagatttac cgggaacaaa aaaagatttc tacaagctcg caatggcatt aaagaaacaa
    26701 ggtgtttctg atgatgtgct gaccggaggg gcattaaaaa cttctgccga actgaatgtc
    26761 ttgcttgata tggatcagga aagtggtgga gagtttttag cgaagtttat ggaatctcac
    26821 cggctcaatg aaaatgagtt accacaagca gccgattatc tgcaacgagc aatgtttgcc
    26881 ggcggtttaa gtaaagagca gatgtatgaa tcgatgaaat actatgctcc aaaactgaac
    26941 tcaatgaaac ttacaggggc tgagaatacc gaaaaagtgc tggcgattga agcaatggca
    27001 ggtcagcaag gcttagaggg ttcaaccttt ggtacgggct taaatatgat gttaagccgt
    27061 atgaataaag gaccggaaat gctcaaggca gcagccaaag gaatgaaagc cgaagctcga
    27121 gagatgatgg aggctgtcgg agtagaattt aatttctggg ataaaaacgg ctcattcaaa
    27181 ggcattgatg gaatgctggc tgaaatgacg aaatttgaaa aaatccgcaa aaaattcggt
    27241 gacaaaggtg taggtttagt tgcagaagag ctgtttggca ttgaaggtgg gcgtcttgct
    27301 gatattttgg ctatgaaagg tcaaaaaggc ttagatgaaa tgctgagtaa aatgcgtgaa
    27361 caagccagcc ttcaagatcg cattaacctt aaaacaaata cattaggtgc tgccctagaa
    27421 tctttaggag gagcgtggga aacctttgtg ggggatattg gctctgtctt tgccgaagat
    27481 ataaaagggt tttcaaaagg cttgcaatct gcggtggaat ggcttgtgcc atttgtatca
    27541 aaacataaag aggcgattaa atttgtaggt ggtttggttg ctggacttgt tattttacga
    27601 ggcgttttac aagctggttc ttttgttatt caaacggtaa ctatggcaat gaacgccctc
    27661 aaaattgcag caatgaccaa tcctattgtc ttagtcattg gagcaatcgc agcgggtgct
    27721 tacttgattt atagccattg ggatagcatt gccccttggt ttgcaaatct ttggcaaaat
    27781 gtgaccgctt acttcaatca attttggact tgggtaaaag gtgtttggtc gggcgtgacg
    27841 gactgggtgt cttctgtgtg gaatggtgta gccacttttt tcgggcagtt atggactacg
    27901 attactagct tatttagtgt agcttggaca aatatccaaa caatatgggg aggagcaaca
    27961 gcttggttct ctggtttatg ggatgggatt aagtctgcgg cttttggtat gttcgacagt
    28021 attagccaaa aagtcagctc tgttgtagca agcattaaga gctttttagg ctttggcgat
    28081 gatgtggata aaatgggggc aaaaattggc aatgtagcta cccaagtcat cagcaaagaa
    28141 cactcaggac aactcagcaa aaccgcagat atggcagcca atacagggtt ctctagcggt
    28201 ggtttcaccg ggcaaggcgg taaatatacc cctgccggta ttgtgcataa gggcgaatat
    28261 gtgatgacga aagaagcgac ctctcgtttg ggtgttggaa tgctggatag cttaaactat
    28321 ggcggtgcta tgggtttcac tcaacctgtt ttgcaaccga ttttaggtaa gcaaaaaggc
    28381 ttttttggct cactttggga cgatgtgaaa ttcggggcaa actttgtcgg caatctgctt
    28441 ggcttaaatc aaggcagcct gaaaacgcct gattttaacc caaatgcgac caatgcaagc
    28501 ggtcaaaatt cgtcgatttt tagcaattat gaaccactca accgaaatgc ggtaacacag
    28561 caggaaagct cgcaagcacc gcagatagtc gtgaacttta acccgacaat caatgtaaac
    28621 ggtaatgcta cgcaagaggc tcaatcgcaa attatgcagc agttgcaaat gagtgcttat
    28681 gagtttgaga aattgctcaa tcgtgtgcta gaccaacgaa gccgtagagc ctattaggag
    28741 tgatttatgt attttatgtt aggcaatatt gcctttgagc cggtgaattt aactgaattt
    28801 agcgagcaac ataccgccga atttgccgaa cacgctgtgc taaaaggcaa acctcgttta
    28861 caagcgatgg gcgaaaagct aaatgaactt aatttttctc ttcggttgca ccataccata
    28921 ggcggtgtag agagccgtta tcaagccttg cttgaagcca aagcgaagca agcggcattg
    28981 gcgttaattt ggggcagtcg ttataaggga gattatgtaa ttgtcgatat ttcatcgacc
    29041 acattgttca ccgatggcag aggcaatgcc ctcgctcgtg aaatgcaaat cagcctgaaa
    29101 gagtttgtgg gcgataatga cggtggtgtg ttgggtgagg cgttaaattt tggtggtggc
    29161 tcactgcttg gctctatttt gccaagcggt gcggtaacta ccctatctca aatcaaaaca
    29221 gcagtcagcc gaggtgtgga gctttataac agcggcaaac gcttagttga cgaagtgcaa
    29281 aataccgtgg cgattattcg gcagttgaaa aatgacccgg caactgcatt ggcatattta
    29341 cccgctgcat tagcgaattt agacggggca ttggggcatt ttggtaattt gaccggctca
    29401 tcggcgacct tgggcggttt gcaggagaaa ctaccggcag cagtggtctt tagcgaggaa
    29461 atcggcgaga tttatcagag tttgcaaaca atgcgaagca gtttgggtaa tgcctcggca
    29521 aatagctggg ataattggtt tacaccggca gagagtgcat tgacagaggt cacagacagc
    29581 tttgaccatc tagcaaaacc ggtggcaaaa atgaccgctt ggattgtgct gcgtaccgat
    29641 gaggaggcag aaaatgacac agttgcttaa acatatcgtc aaacagggtg agcgttggga
    29701 taacttgagc tatcaatact acggcaatgc gtttgaatat ggtcgaatta ttgatgccaa
    29761 tccgcatatc ggtttttgcg aggtgttgcc gataggggta acaatttata tccctgtact
    29821 taacgttaag ccaacgaata atgaaaatat gccaccgtgg ctaagggggc gtgatgcgta
    29881 atgtaccgaa gcccgatttt tcactgtttt atgaaaaaac caatatcact gccgagattg
    29941 agccacattt ggtgcaactg acctatatcg accatttgga aggtcaatcg gacgaactca
    30001 ctgtggaatt tgaagacatt caaggcaaat ggatacgcca atggttcccg actcaggggg
    30061 ataagctcaa agcggcgatt ggctatcagg gcgaatttct gacggacatc ggtgagtttg
    30121 aaattgatga agtggaatat agttataagc cttccactat taacttaaaa gctctaagca
    30181 ccggtatcag caaagccaac cgtactttaa aaccgaaagc ctatgagaat acgactcttg
    30241 ctcaggtggt ggcaaaggta gcagataacc tgaaattaaa ggtagtcggt aagattaagg
    30301 ctatcccgat taaacggatc acccaatatc aagagcggga cgtggagttt ttggcacgcc
    30361 ttgcccgaga gtatcatcac agctttaaaa tcgtgggcaa tcagctggtc tttaccgata
    30421 aaagcgaact ggggcaaagt gagccggtgt taatgttgga agaacgggat actatttccc
    30481 tacgtttgcg agatcggatt aaagacactg caaaggcagt ggaaatcagc ggctatgata
    30541 caagcggtaa aaaagtggtg aaaaaacgca aaaaggcaaa agccttacgc ccgaatataa
    30601 aacaagctaa atcagccagt gaagatacgc tgaaaatcat cacacgaggc gaaagtcaag
    30661 aacagattga tgcacggggt gaggctgcgt tggctacgca aaatgaagat caggcggctg
    30721 gtgatattga gcttatcggc aatcctaaat tggttgccgg agcaacgatt ttattgcgta
    30781 actttggcgt gtttagtggc aagtatctga ttaaatcatc acgccatacg attagccgta
    30841 gcggtggtta tactactcat attgaggtca gaatgttgga gtttattgcc gatgatttaa
    30901 tcacattagg tatggaggct ggcaatgcaa acgcataatt ttggggcgac ttatcaagaa
    30961 gggattgtat ccgctgttga tccgaaaacg cacaaagtgc ggtgtaaaat ccctgcgctg
    31021 gaagatttag aaactgcttg gctgtcgttt ttgaccccga acgccggtgg caatcagttt
    31081 tactgtttgc ccgatgtggg cgagctggtg gcaatgctac ttgatgcaca aggcgaaggt
    31141 ggctgtgtgt ttggggcaat ttataacgag caagacccga caccggttgc cgatagcgat
    31201 atgtgggtta agaaattcag caatggcacg gagatttcgc ataatcgcaa aaccggcgat
    31261 gtggtagtga agactaacgg gcatttaacc gcaacggctc aaggtggggc tacgattaat
    31321 gcaaacaccg tagtcaatgg cacattgcac gctaccggta aaatcacctc tgacgaagaa
    31381 gtctctgctc ctgttgtgaa acaaggcacg gtagagcttg gcacacataa acacggcggt
    31441 agccctgaac ctaataagta attctttaaa ccagtttaaa atccctttta aagatagccc
    31501 tgtatcatca gggctatgaa cagacaaact tccattcaat taacccactg gcaacttgca
    31561 ccctcaaccg atacagttga ggtggtgcaa ggtattgatg atattcatct ttgtattgtc
    31621 aatatccttt caacccaaaa aggcacggat attttacgcc ctgaatttgg ctctgaccac
    31681 tttcgctaca ttgactaccc tgaagatgtg gctatcccga attttgtacg ggaaattaca
    31741 accgccttgc aaaaatggga aaaacgcatt gaggttgaag aagtattggt ggacggttca
    31801 gctccgcatt ttatttttac tgtgatgtgg cacttaaccg atgatgttta tcgtgaaatt
    31861 taccgaacaa cggtataagg ataggcaatg acagaagcga ttaaaatcat tgatgacgat
    31921 gtaaaaaccg tacttgccga agcgattgcc gattatgaaa aacgcaccgg taaaatctta
    31981 caacctgcac atattgagcg ttccattatt caaacctacg cttaccgtga gcagttatta
    32041 cgcaaaggca ttaatcacgc ctttttacaa acctttccgc agtttgcgac ggggattgcg
    32101 ttggatttgt gcggggaaac ttttggttgt tatcggctta gagataaacc tgcccgtact
    32161 ttactacgct tttcagtaag tggtgaacat acagctatag ttatccctaa aggaacgcag
    32221 gtagcaatta atgacgagct atacttttca acgctcaatg acgatgttat tactccatta
    32281 attacctatg tggaaattga tgcagagtgt aatcaggttg gtgttatcgg taatggttgg
    32341 gaatcaggaa gagtcagtaa actaaaaaca gcactggcaa ctaattataa agtaacagtt
    32401 gaaaacattg atattacgag cggtgggttg atgcaggaag aagatgaacc ttaccgtaag
    32461 cgaattttag ccgcaccgga agcctttagt aactgtggct ctatcgctgc atatgattac
    32521 cacgtccgct ctgtatccca agatattgca gatgtgaata tctctacgcc taggggtggc
    32581 ttggtaagaa ttgcggtatt gacccaaaaa gggttaccgg atacccgatt acttgatgat
    32641 attaaaaaac acgttagtgc cgaacggcta cgcccacttt gcgatatggt cgaggttatt
    32701 aagcccacag aacgccgtta tcaaattacg gcacgtttaa tattgttaga tggctaccgt
    32761 gaggatttgg taaaagcaaa agcccgagag gcattacaac tctatttgtc agacaagact
    32821 aaaaaactcg gtttagacat tgtgccgtcg gccatcattt cagctttaag agttgagggt
    32881 gtttacgatg tgaatttaat tcagccagtc aaaactatta tcaacgaaac agaatgggcg
    32941 aactgcacag caatcagcgt agaagtcgaa gaggagcgta gagatggcta gcttgcacta
    33001 tgcggacatt attgtgcgag accctaaata taaagcatta gcggatttaa gcaagcggtt
    33061 aaatttgctc gatacttcgc aaattatgac tacgctggtg gatttattgg gcgacgaatg
    33121 tatcccattg ctggcagaaa aatggtcggt aaccggctat gacggcttat tggttgcaga
    33181 tagcgaaaac tcaaagcgag ccttaattaa aagagcaatc gaactacatc aactaaaagg
    33241 cacgccttgg tcaattcgtg aagtattacg cagactaggt ttcggagagg ttgagattga
    33301 cgagggactg aaaaatcggc tgtatgaaag cacttatgtg agcggaatcc ccgaaaacga
    33361 acgctgggcg cactatgcga ttaggttgag taacccgatt accaatgagc aagctcgcaa
    33421 tatccgtaag gtcttacgca attttgctcc ggctcgttgc tctcttgcag ttttggatta
    33481 taaagcagat ccaattcgat ataacaataa agcaacctac aacggcacat ataaccacgg
    33541 ttcaagttaa ggataaatta tggcaggtgt acaagaaacc gcacagtggg aaaaccacgt
    33601 ttacagaatt gaagaaaatg acccagtcca cggaggagaa aacggtgtaa ccaataagcc
    33661 aattaagcac ctagcaaacc gcacgctcta tctgcgtaga ttgctcaccg aggcaggaca
    33721 acgcattaac ccgaaaaaaa tcacagctac cagcaaaaat agtaatgatt taactgggca
    33781 tactcacgag attgaccacg caagcctaac gcaaaaaggc attgtgcagt taaatgcgag
    33841 tatccaatca actagcacaa ctgagtctgc aaccccttca gcagttaaag cagcctatga
    33901 taaagcagca acagcagaac aaaaagcgac attggcaaat gagaaagtcg aggcgattaa
    33961 agtaggcgga cgaaacctcc tcattcaatc caacactcca cacaacggga atgcgtactc
    34021 agtcagatac gcattggctg aggctccgaa agtaggcgaa gagattgtag tcactctatg
    34081 gggtgaactc ggctctcaac gtactggaat tggcgtttac aactctcaag gtgctacgga
    34141 gttggcaaaa ctggtcaaaa ttcgtgatgg agtttatcaa ggtaaaggca tttggcgtaa
    34201 gccgatgagt gagggacgag agcgaacgcc taacgacacg cacctgaatg tgtattttta
    34261 cccgaaaacc gcaacagata ataaccgtat tgagcgaatc cagcttgagc gaggctcaat
    34321 cggtacagat tggacgccaa acgaggcaga cttaaaggca gagattagtg caatccgcac
    34381 taaactaatc cctgtacggg gtggcaatgt tgctacaacc ttaaatgcgg ctaagcggtc
    34441 ggattggttt agagaaatgc aaatccctta tcaaagtggt tgggggtatt acacccaagc
    34501 atttcataac tcagggacgc aacacaacta cagcaattta ccgctgacag gtcgttatta
    34561 ttttatcgcc gaactctatc ataactctgg ttattctcac ttgcgtatca cctatccaag
    34621 tttaaaacgc acctttgaga gtgctatcaa ccttaacaat gaggatttga ttctagattg
    34681 gcgtgaggtg gtgtttttaa aagatggatt gtatcaaggc acttttaaaa caacaggcac
    34741 actagagtct gcttatcgtc taagagcggc tcgtgatgat gaacgttatc agccatacct
    34801 gcaaatggtc gatatgggct atgaccttgc caatcccccg gtaggaaaaa acaaaattat
    34861 tggcagtgtt gattattacg ttaaaaacgg cacaagcgag tcttccaaag cgacgatgat
    34921 ggcagcggca atgcctgaca agaacgtatt ttgggaagta gcattgtgga atgcagcaca
    34981 gcaacggaat gtattgttta aggggtatag caagactaac aatttgagta ttggtaaaac
    35041 caccgacaat gagcgagacc gagtacaagt caatggcaca atccaagcca ccgcaccggc
    35101 tgataacgcc aataacgacc aagtgccgac tacggcttgg gtgcgtaaga tggcaaagat
    35161 tttagctgat ggcaaggtga gtaaagccgg tgacacaatg actgggcatt tattcatcaa
    35221 gaatggggaa tactctgcgg tacataccta taacacaagt ggttggttcg caaaatggga
    35281 ggcggcccca ttatctgatt cgcactttgc tgccattgta tatgccaacg acagagagac
    35341 agttatcaat cgggtgttaa ttcccaagaa gaatggcaca gtcgctttaa ttaatgatat
    35401 tgccgatacc gttagagccg ctgtgagtcg tagtgataaa tcccgtagta gaacttttcc
    35461 tctgcaaacg gggaaaaaat atacaaccac agggagcgtt acgatttatc cagatggccg
    35521 aattgtgcag attttccact taaaaaatat taaagcggcg tggtttgatt atgaggcaag
    35581 tgcggtagga gataggcata gagttgtcaa tatccctctt tggactgcga tgccaaataa
    35641 aatttttgat gtcgatgtta aaactgttcg cccctcaaat aatgcctcaa cttactacat
    35701 agaagcggct gaatggctga gtgcgtggca gatttacggt aatgacacga acaaatcaag
    35761 tgtcaatatt aatctatctc gattcagagg tggaaaggat gaagatatgg acttgtatgt
    35821 aacagttgag ggatattaaa tggcatattt tgtgaatgtg attgatgagc aaggcaatta
    35881 tgagctaatt gatgatgagt ttattgggct gtatccggat ttggatttta acacattacc
    35941 caaactcacg gataagcaat atcagaccta ccttgccaaa gcaaacggca aagagcgatt
    36001 tgtaaatggc gaatttgtgt atgagcaaat taaggtggat atgcaagcgg tcatttccgc
    36061 tgaaaaatct gcaaagttag cagagattaa ccaaaaagca caagccttta tcaatgattt
    36121 agccaaatac aacgaaacgc ctaagtttga gcgtgatact tggcttgagc aagcgaaaga
    36181 ggcaaaagcg tgggtggctg acccaaccgt acaaacgcca acccttgagt taattgcgca
    36241 aatgcgaggc ataccgctcg acacgctacg ccaaaaagcc tacgaaaaag cgatggcgta
    36301 tcaaacggtg gctgctattg tagcagggca acggcaagga tacgaagacc gcctagaaca
    36361 agcggaaacc ttagagcaaa tacaggcgat tgagccgatg tatcaattac cgcaaggagc
    36421 aaacaatgag caaactgact aaattaaaat cgtggagcta ccacgtctta attgcaatag
    36481 atcaactctt taacgctctc accggtggag cagcggacga aacattttct agccgttgct
    36541 accgtggtgc agtgcttgcg gaaaatccga aaaaacgttg gcgtttttgg cactcttttt
    36601 tgaattgctt atttttagac ccaaagcact gctacgccgc ttataaagcg gaggtacacc
    36661 gcaagcagta tccgaaggca tttagacttg gggggattta atgaaaaagc aaaacttaaa
    36721 attagtgcgg ggcgatgatg tgagttttag attcagcatt aaagacagca ccggacaacc
    36781 tcttgcgtta aaggatttgt ggtttgattt gcacttagtc agctatcaag gtgaggtgct
    36841 gattgctctc tctactgatg atggcagtat tgagacagca gaggctggtc agatggtgtt
    36901 acattttagt caccagcaaa ctgctcgagc tgaatggaca agtgccaatt atgacttgca
    36961 actcacgcac gactatacaa gagtctagga ggtggagatg acctctatca ttgaactaga
    37021 cctgactgat gacctcatca ttgaggtgca gttagatagc acaatcatta ccggcgatag
    37081 ctttttagcc aacctgccgg atttactcca aatttacaac caagcaaagt cagatagcag
    37141 taaggagctt aacaatgact aaacacaaaa accacgaaaa ccacccgatt gctataacat
    37201 tctaccaact tggcaaagat gtcggcgaca ttaaccgccg gctagcggtt attgagcaac
    37261 gtgagcaatc agcacagcca agccaaccac aagctgaggc ggttacaatg ccacagcaag
    37321 atgctgttgc cattaataac atcaatgccg ttttggaggc ggtcgaaaaa tacaaaactt
    37381 ttgaaaaata caacactcag tggcaagagc gttttgaaaa attcctgtct cgtaacccga
    37441 atgattacga gttaagtgaa gagcaacgcc aaaaacttta ccacacgatg tgccagcatt
    37501 tgtggcaggt gaactttact gaaatcaata gtaaacagta tgaattaccg atcccgcaac
    37561 aattccaggg taagtttggc tatattgtca aaacctcggg cggtagcaca gaaattagtt
    37621 ttgagttgct atctgaaact cacagcactt atctttatcc ggatagctat attcccgagg
    37681 gcggtggcga tgtaatgctc aagccggctt atatttattt agtgattccg gacttagtgg
    37741 caatgcgtga gccggaggtg gtgggggttt caccgctgaa actgaacatt ctgcagaaac
    37801 acctgctgac acctcagaaa ctacaggagc agaagccctt gaacacgaag gcaaactgat
    37861 tgatggcgta tggcattttg agcgagagcc ggtaaatcca ccgagagatc agaattatta
    37921 tgtggcaggt aacctgttct acaacggcat accggattga taaattgatg tttcagtaaa
    37981 cctaattagg ggggaatccc ccttttttat tattataagg aaagaaaatg aataaatctt
    38041 tagtagcgtt agctgttgca gcgatggcat cgaaagcaca aactaaacag caagcaagca
    38101 agcaagcaag caagcaagca agcaagcaag caagcaagca agcaagcaag caagcaagca
    38161 agcaagcaag cattgtgaga tagagaaagt atttaaacaa gctcctttac ccttttcagg
    38221 gcaaaaacgg atgtttttat cccatttcaa acaggtgtta aatgcaaata ttgaagcaga
    38281 cgggaaagat tggactatta tagatgtttt tggtgggagt gggttgcttg cacataccgc
    38341 aaagcgtgag aaaccgttag caagagtgat ttataatgat tttgataatt acgccgaacg
    38401 gctaaaccat atcaaagaga caaatcaact tcgccaagaa atctaccaaa ttgttgatga
    38461 aattatacca aaaaataaga gaattagcaa tgaaattaaa gctaaaatca tcaataaaat
    38521 caatgatttt gaggggttta aagacctcaa atgcttaagt tcttggttat tgtttagcgg
    38581 tgagcaagtt gcaactttag atgagttatt taagcacgat ttttggcact gtgtgcggca
    38641 aagtgactat cctgaagcaa cgggttatct tgatgatatt gaggtggtta gtgagtcctt
    38701 tcatcaatta ttgccgagat ttcacgacaa agagaaagta ttattgattc ttgacccacc
    38761 ttatctttgc acaagacagg aaagctataa gcaggaaaat tactttgatt taattgattt
    38821 cttacggttg atagacctta ctaaaccacc ttatatcttc tttagctcaa ccaaaagcga
    38881 gtttattcgc tttattcact atatggttca aaacagaaaa gaaaactggc aagcgtttga
    38941 gggagcggaa agaatagtgg ttaatgcctc ggcaagttat aacggcaaat atgaggataa
    39001 tatggtgtat aagttctaaa aatttaaacg ccctttgata gtgatttaaa gggcgttaaa
    39061 aaaccattaa aattaagaaa gtaaagctcc tgttttcttt cgtagttttc gtggttgcgt
    39121 ttcgcagttt tgttggctcg ctacaattac tgttcattgt aatgtttaat cgaccattgg
    39181 ttttgctagg atcagtttca ccaaaataac cgttaaaacc ttggacggtg ccttctgctg
    39241 ctttgatttt ttcagcaagt atttgttgct ttgcagcact ttcatctgtt accttgagta
    39301 cttcaaagta ttcgttttca cgaatgagac cagtagcaaa gtctaaatcg atgaaaactt
    39361 tacgcgcatt aaaaatagct gtgatctctg caacgcttaa aggttttttc aaacggataa
    39421 aattagttgg caagtgtgga aaacgttgat atgtgaaaat atctttgtcc aaatgacgag
    39481 aaacctgatc tggactagta attgcttgaa ctttcacttg gtcaattgtt ggactaacta
    39541 tgccggttag tgtaatgttt gctgtttggg ctgtattatg attgacaacc atcgctcctt
    39601 catcgctatt ctgaatacgg cggaacgtga gatcattgcc gttgacatct aagcgcccac
    39661 cacgataacc aaaatagata ttgttaggat ccatttgatc tgatgaattg aggattacgg
    39721 taggtctgcc actcacaata cctagctctg aaaatgcaga ttttttgtta ttttcatccg
    39781 cttgttgatt taatataaca gtgccgtcac caacgctaac ggagcctttg ttttctcctt
    39841 tgccgttgat agttagtgtc ccttgtccga tttttgataa tctgtcacca gcagggttac
    39901 tgattttcca gatcacattt ttatctttat caatatcaac accggctcct aaccaagtaa
    39961 tgcctgcttt cataccttcc acagtggtat taccatgaaa atggattgct cctgcacctt
    40021 ggttgatatt ctctgtgaga cttagcgtat tgttttcacc caaaatatgg aatgttttac
    40081 cgtgttggag ttgaggattc caagggttat cgcctgtatt accattatga ccttgaagtg
    40141 ttggtaatga agtatctgct aaattaactg taagaggagc attccctcct acgattgagc
    40201 tggtattgcc agaaggtgtc caagtgagtc tagcaccatt tgcattaata gcgcctgcat
    40261 tattttcttt ttctaaagca cgtacataat gtgggtggtg atagttccag taagatttat
    40321 aaacatctcc cccaagcgta ttattctctg agaaatagtc actatataca cctaacacaa
    40381 cccatttttt ggtacgaaca tcataaccaa aaagagcgga gccactatcg ccaggtaaac
    40441 cgagagttgt taagggaccg tagccgtggt ctttaaatac atcgtttatg gtattatttt
    40501 cagtttttgc tactaaaata cggctgttaa aatcgctgcc tggaacgctt ggatcgccat
    40561 tagtaacagg cagaacgcta cctcctgtca aaaaaggacc gttaccgact tcaatacgcc
    40621 cgttgtttaa gcgatctctt tcgttgttaa ccactgcttg tctaccagaa ccggcacgaa
    40681 taaacatggg gaaaataaaa gggtcgctaa atacactata aaaatcttgt acattttcgg
    40741 tagtgcgttc aatctcatta gctggagcga cttcagttac taatttcgat aacctaggtg
    40801 cgtggtagtc ccagcggggc gttgggttac ctgaaccatc taaaatcagt ttttctcctt
    40861 cgtcattacg ttcacgtttt tctatgcctt tcccgagatc tgttctttct ttatttggat
    40921 caggcatata gttattacgg cgcaccacac tataattgta atgatggtcg tcggcttttt
    40981 cgctagatga atcaccaaat tgaatgtccc gatagccttg gttgtggttt acactaataa
    41041 cgtattgtgg attaactaat gttgcaatcc ctgtttgacg agtaatggaa gagaagtcaa
    41101 tcattggaat agacatagtc tcacctgtta ctgtttcaaa aacaggtaga tcattagagt
    41161 cttcatcacc tccaccatag agaaattcat aacaaccggg taaactttca ttatcaaagc
    41221 attcagatag gcttacattc ggcttaggtg aaatatttga ttccacttca acctgcttag
    41281 ttggtgtaac ctgtaaaaaa gtaccgatgt ttttgcccgt tttatcaata actggaatat
    41341 tggttgcccc aacaaaaaat ttgcctttat tttctgctaa atcacgaaaa tattgataat
    41401 cgacatcacc acgtacaata gatgccagta atgttggtga aagagaaata gcaattgatg
    41461 ttgctagaag agagagcttg aaagtatgct tcattattat ttgaaacctg tataaatatg
    41521 taagtagatc agatttgagc gctattaaaa agattattta aatcgattaa atattcattt
    41581 aaataccaca caattattca gcgcgattat ctt
//
LOCUS       DANLZQ010000012        40395 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.012, whole genome shotgun sequence.
ACCESSION   DANLZQ010000012 DANLZQ010000000
VERSION     DANLZQ010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 40395)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40395)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40395
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.012"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..984
                     /gene="pheS"
                     /locus_tag="PXE50_000566"
     CDS             <1..984
                     /gene="pheS"
                     /locus_tag="PXE50_000566"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HDL5621503.1"
                     /translation="QHLKDLTNKAREALDKIDQNLEALEEFRVEYFGKKGHFTTLMQE
                     LRNIAAEERPAIGAKINEAKQVVLDVLNAKKEEWEQAVLNAKLANESIDVSLPGRKTE
                     LGGLHPVSITIERVVKFFSELGFTVANGPEIETDYYNFDALNIPDHHPARADHDTFWF
                     DANRLLRTQTSGVQIRTMENVKPPIRIVAPGRVYRNDYDQTHTPMFHQIELLYVDKEA
                     NFTELKGLIHDFLKAFFEEDLQVRFRPSFFPFTEPSAEVDVMRQNGKWLEVLGCGMVH
                     PNVLRNVGIDPEEYSGFAVGMGVERLTMLRYNVTDLRSFFENDLRFLKQFK"
     gene            1032..3419
                     /gene="pheT"
                     /locus_tag="PXE50_000567"
     CDS             1032..3419
                     /gene="pheT"
                     /locus_tag="PXE50_000567"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HDL5621504.1"
                     /translation="MKFNESWLREWVNPAISTEQLCDQITMLGLEVDDVEPVAGAFSG
                     VVVGEVVECAQHPDADKLRVTKVNVGGERLLDIVCGAPNCRQGLKVACAVEGAVLPGD
                     FKIKKTKLRGQPSEGMLCSYSELGIKEDHSGIIELPADAPIGQDFREYLNLNDVAIEI
                     SLTPNRADCLSIAGIAREVGVINRVDVKAPTITDVKATISDKVSVELQAPEACPRYLA
                     RVVKNVNVKATSPLWLQEKLRRCGIRSIDPIVDITNLSLLELGQPMHAFDAAKIEGGI
                     QVRMAKEGEELVLLDGTNAKLQSNTLVIADSKGALAMAGIFGGEASGVSENTKDVVLE
                     SAFFAPLAITGRARQYGLHTDASHRFERGVDPELTRQAMERATALLLEICGGEAGEIV
                     EAVSQENLPKRNTVTLRRSKLDSVIGHHIDDATVTDILTRLGLNVTFADNSWTAIAPS
                     WRFDIEIEEDLIEEIARIYGYNSIPNNSPLAHLTMKGTPEKLLEANRIRMALVDSDYQ
                     EVITYSFVDPKKQSLLHPQQEALILPNPISSEMSAMRVSLLTGLLDTIVYNQSRQQNR
                     VRIFEAGLRFIPDSNAESGVRQEFVFGAAIVGDKRPVHWENKSEAADFFDLKGDIERI
                     LSLTSIRHDLQFVAKQFPALHPGQSAAIMLDGKEIGFIGTVHPSIVQKFGIKGKPIVC
                     EILASAIAERPVTQAGEISKFPANNRDIAVVVDESVPAGEVLEACRKAGGNKLVAVNL
                     FDVYRGSNLESGKKSLAISLTVQDNEKTLEENEINAVIQAVLAELATRFNAVLRD"
     gene            3477..3773
                     /locus_tag="PXE50_000568"
     CDS             3477..3773
                     /locus_tag="PXE50_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005710633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HDL5621505.1"
                     /translation="MALTKIEIAENLIEKFGLEKRVAKQFVELFFEEIRSSLENGEEV
                     KLSGFGNFSLREKKARPGRNPKTGENVAVSARRVVVFKAGQKLRERVEQASSQS"
     gene            3812..4333
                     /locus_tag="PXE50_000569"
     CDS             3812..4333
                     /locus_tag="PXE50_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDL5621506.1"
                     /translation="MKLTKRWLSLGCLLAITAMLVACSSSDTTSKSQVKSKVYRSIYQ
                     SDLSDPIMAISRLSEHQHEWKGTRYRLGGNSKAGIDCSGFMQVTFKDLFGIDLPRTTT
                     EQAKAGERISKDELRTGDLVFFKTGRGPNGKHVGVYVKNGQFLHASTKGGVIYSDLDS
                     PYWSKAFWQARRL"
     gene            4349..5392
                     /gene="degS"
                     /locus_tag="PXE50_000570"
     CDS             4349..5392
                     /gene="degS"
                     /locus_tag="PXE50_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane-stress sensor serine
                     endopeptidase DegS"
                     /protein_id="HDL5621507.1"
                     /translation="MLKKIGQAVIFGLFCAILILFVAPIIQSKGSSFSLSAFTQKEIV
                     SYNAAVKIASPAVVNVYSRNFSSENETFEVKNLGSGVIMSSDGYILTNRHVIEDADQI
                     VIALQNGAISTNVKLVGDDSLTDLAVLKIEGENLPTIPQNPERKLQIGDVVLAIGNPL
                     NLGQSITQGIVSAIGRKTLTESGRQNFIQTDVSINQGNSGGALINTAGELIGINTLRF
                     GKNTNELSEGLNFAIPINLANQIMSKIIKDGRVIRGYFGVSTDLLDTAKMQGYEKGVI
                     IVNVDKNGPAAKAGIQAGDLVLKVGDIEAFSPSQMMEELAEMKPYTTVKVLVQRDEQL
                     LNFDVTITELQTQ"
     gene            5401..6075
                     /gene="cmk"
                     /locus_tag="PXE50_000571"
     CDS             5401..6075
                     /gene="cmk"
                     /locus_tag="PXE50_000571"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HDL5621508.1"
                     /translation="MKKIVITVDGPSGAGKGTLCHALAEKLGFDFLDSGALYRITALS
                     AIKKEVPLDDEEKLAEVGRNLDIQFLPENGEIQVILEGENVGDLIRTAEAGQNASKVA
                     AFPLVREALLERQRAFSSEKGLIADGRDMGTVVFPDAQIKLFLDASAEERTKRRVKQL
                     QEKGFNANFDEILAEIKERDFRDRNRSVAPLVPAKDALLLDSTHLSIEDVINQALNHI
                     AQYIKF"
     gene            6167..7834
                     /gene="rpsA"
                     /locus_tag="PXE50_000572"
     CDS             6167..7834
                     /gene="rpsA"
                     /locus_tag="PXE50_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006717605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HDL5621509.1"
                     /translation="MSELSFAQLLEESFAATPRLGDVVKGTVVAIQKGLVIVDTGFKS
                     ESAIDASEFTNAQGELEVQVGDEVDVVLKAVEDGFGATVVSRGDAKRNEAWIALEKAF
                     EEQATVIGFVNGKVKGGFTVELNGVRAFLPGSLVDTRPVRDSLNLEGKEYEFKVIKLD
                     QKRNNVVVSRRAVIETESNQDRDAVLANLVEGSEVKGTVKNLTDYGAFVDLGGVDGLL
                     HITDMAWKRVKHPSEVVNVGDEVTVKVLKFDKDKTRVSLGLKQLGQDPWAVIAENHPV
                     NSKLTGKVTNLTDYGCFVEILDGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLE
                     VDEERRRISLGLKQCKANPWEQFAATHSKNDKVSGKIKSITDFGIFIGLEGGIDGLVH
                     LSDISWNVSGEEAVRNYKKGDEVEAVVLQVDAVKERISLGIKQLESDPFTNFVDGTKK
                     GAILTGKVVEVDAKGVKVELEGGVEAFIRANEATAERVEDITSVISVGDSIEAKYTGV
                     DRKSRVVNLSVRAKNEAEESAAIAQVNKEEVVVPNAFAEAFKAAKGE"
     gene            7963..8244
                     /locus_tag="PXE50_000573"
     CDS             7963..8244
                     /locus_tag="PXE50_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HDL5621510.1"
                     /translation="MTKSELIESLASKNPSLPIKMVEHCVKELLEQLTATLEEGERIE
                     VRGFGSFSLHYRQPRLGRNPKTGESVLLGAKYVPHFKAGKDLKERVDLL"
     gene            8281..8568
                     /locus_tag="PXE50_000574"
     CDS             8281..8568
                     /locus_tag="PXE50_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1049 domain-containing protein"
                     /protein_id="HDL5621511.1"
                     /translation="MIKYILGILIVIAVIIVAVTIGANNDQLITFNYIFAQSELRLST
                     LVAILFGLGLILGWLVTGIFYLKIKFQNVALNRRVKRQAQQITELTTPKAE"
     gene            8572..9768
                     /gene="lapB"
                     /locus_tag="PXE50_000575"
     CDS             8572..9768
                     /gene="lapB"
                     /locus_tag="PXE50_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HDL5621512.1"
                     /translation="MLELLFLLLPIAALYGWYMGQRSAKKDQETASNKFSREYVTGLN
                     FLLSNQQEKAVDLFLSMLQKQESENHIASESQFEAELTLGNLFRSRGEVDRALRIHQT
                     LVNSPHYSFDQKLLAKQQLAKDFMVAGFYDRAENYYISLVDEPEFAKYSLSQLAVIYQ
                     KTREWKKAINVTEKRLRIEPDADKIPLSHFYCEYAQGVKFDDKAAFIESLNKALEYYP
                     QSTRASIILGDFYLEEGEYLRALSYFEQILVQDPDYISEVLGRIKQSYMALEDLNGYE
                     LFLIRANRVKHNSSVDIALTEFIEEKDGINAAHSKLYQQLSTYPNLITFHRFIRYQAD
                     FAEEGNGKESLVLLHNMVGNQIKRSFQYRCLNCGYQSYRLMWQCPSCNQWEKIKPVQS
                     IEGIIQ"
     gene            9792..10484
                     /gene="pyrF"
                     /locus_tag="PXE50_000576"
     CDS             9792..10484
                     /gene="pyrF"
                     /locus_tag="PXE50_000576"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HDL5621513.1"
                     /translation="MNNKVIVALDYETEREALEFVDLVDPSLCRLKVGKEMFTTLGTN
                     FVKQLHERKFDVFLDLKYHDIPNTVARAVRSAADLGVWMVDLHASGGLAMMEEAKKIL
                     EPYGKEAPLLIAVTVLTSMEDLDLLQIGINASPMEQVIRLAHLAQRAGLDGVVCSPQE
                     VEVLRTHCGQDFKLVTPGIRPKGTDFGDQRRVMTPKQAVETGSDFLVIGRPITQAQDP
                     LAVLKSINQSIS"
     gene            10567..10878
                     /gene="yciH"
                     /locus_tag="PXE50_000577"
     CDS             10567..10878
                     /gene="yciH"
                     /locus_tag="PXE50_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response translation initiation inhibitor
                     YciH"
                     /protein_id="HDL5621514.1"
                     /translation="MTLVYSTETGRIKSEVIKEERPKGDGIVRIQRQTSGRKGKGVCL
                     ITGLDLEDKALNSLASELKRKLGCGGSFKDGVIEIQGDNRGFIKQILEQKGFKVKLAG
                     G"
     gene            10981..13143
                     /locus_tag="PXE50_000578"
     CDS             10981..13143
                     /locus_tag="PXE50_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HDL5621515.1"
                     /translation="MWKKTLIAVFLASQYAFAVGTGKEPSKSYTETELKQLKNDWLAI
                     YQKELQYAENLRLKQRENFQQINYLADAAISQKNLSLSTEQIIQRLLLTLAGYPLEMK
                     AEWKLLNAKITLKQATESEVKAFISKYPDSLYQRQLQNLMFELLYREQKFPELLEYAQ
                     NVKQSSLADQCRLFSARYELAASKAQINPEVSQVTEQKAENAELLALVQEFDRFWLAT
                     PKLTSDCANLESYWRDQGLKTDEKMRLKAVELIKQNANAELANLAANVNNENLKIWLS
                     SVEKVANNPADLQNFIENQPLDSPFYADNKAIIQQLFAKYVRTLSENMENPSFQQYQT
                     WAEKYQLSSEEINGWKNAFITRFFDNPEPTFQFWRDEQIKLLKTDNLTERRLRMAIWQ
                     KADLNEWLVLLSQQAKEKAEWRYWAAKEEKNEAKRKVDFESLAKERGFYAMLAAQQLG
                     IVYQIPMLEVPELTQAQLELYANQLARIQELRELGQFDQARKIWIDWIKNIKPEAGEN
                     TPTKIQLALIKYAKDKNWYDLAVEGTIQTKAFDYLDLRLPNAYSDWFDLHLQDKKISK
                     TFAQAIARQESAWNAQAQSHANARGLMQLLPTTAQKTAKDNGLTFKDGNDLFQPFNNI
                     MLGTTHLMELNEKYPNNRILIASAYNAGAGRVEQWLKRSNGQLAMDEFIASIPFYETR
                     GYVQNVLAYDYYYQMLYSDINDKNGLKMFYQEELTRKY"
     gene            13192..13268
                     /locus_tag="PXE50_000579"
     tRNA            13192..13268
                     /locus_tag="PXE50_000579"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:13226..13228,aa:Met,seq:cat)
     gene            13495..13956
                     /gene="rimP"
                     /locus_tag="PXE50_000580"
     CDS             13495..13956
                     /gene="rimP"
                     /locus_tag="PXE50_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HDL5621516.1"
                     /translation="MATLEQKLEDLVLDSIEALGFELVGIECQRAGRFLTVRLYIDKE
                     GGVTIDDCSDVSRQVSAIFDVEDPIADKYNLEVSSPGLDRPLFTVAHYERFIGQDVVI
                     HLRIPMFDRRKWQGKIKQVEGDFITLTVENEDRQFAFGNIQKANLVPVFNF"
     gene            13977..15473
                     /gene="nusA"
                     /locus_tag="PXE50_000581"
     CDS             13977..15473
                     /gene="nusA"
                     /locus_tag="PXE50_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HDL5621517.1"
                     /translation="MSKEILLAAEAVSNEKQLPKEAIFEALETALTIATKKSRDLDID
                     VRVVVDRKTGDFQTFRRWAVVENVNNMTREISLEAAQFEDPNVQLGDFIEDEVESIEF
                     GRVAIQTFGQVVKTKIREAEKTKIIDEFRSDLGKIILATVKKVTRDNIFLELQGKSED
                     IKGEAVIVREDMIPRENFRPGDRVRGVLYEIKPESKGPQLFVTRAKPVMLEELFKLEV
                     PEIGEGVIEIKGSARDVGSRAKIAVKTHDKRIDPVGACVGMRGARVQAISNELGGERV
                     DIVLWDENPAQFVINAMAPADVSSIVINDETHSMDIAVEAKNLAQAIGRNGQNVRLAT
                     QLTGWALNVMTVEELTKKSEEEDGKVINLLTSALEIDEEFAQVLIEEGFTSLEAIAYV
                     PVDTLTAIDGLEDEDLVEELQSRAKNAITKKALEEEKLLKSAQIEEKLLTLEGMDRHI
                     AFKLAEKQITTLEELAEQGVDDLADIEELSEEKAGELIMAARQICWFN"
     gene            15458..18025
                     /gene="infB"
                     /locus_tag="PXE50_000582"
     CDS             15458..18025
                     /gene="infB"
                     /locus_tag="PXE50_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HDL5621518.1"
                     /translation="MLVQLSKEDNKMTEEKKTLSLGGARKASKVNTTTTSGKVKAVEV
                     KEKKPKIDAKALQEKAAKEAAAAKARAEKEAAEKLAKEKAEAEAKEKAAKKAAESTAS
                     KPISVPVMPSSKAKEEKPKAQQVQPKQEKAVDPEKEAKRKEEAELRRKQEELAQQKAE
                     MEAKRAAENARRLAEIAREEAEDNGNEDFDDERFTSSYAREAERDNDRRSEGNRGRNG
                     KGNVAKAKKGGREEDKNERSADRRNHKEVKGKGKQGKKGAALQQAFTKPAQVVKADVV
                     IGETITVAELANKMAVKATEIIKMMMKMGEMVTINQVIDQETAQLVAEELGHKVILRK
                     ENELEEAVLEDRDTHAEKVTRAPVVTIMGHVDHGKTSLLDYIRKAKVAAGEAGGITQH
                     IGAYHVETDDGKMITFLDTPGHAAFTSMRARGAKATDIVVLVVAADDGVMPQTIEAIQ
                     HAKAAGAPLVVAVNKIDKPEANPDRVEQELLQHEVISEKFGGDVQFVPVSAKKGMGID
                     DLLEAIILQSEVLELTAVKDGMASGVVIESYLDKGRGPVATILVQSGTLNKGDIVLCG
                     FEYGRVRAMRDENGKDVESAGPSIPVEVLGLSGVPAAGDEATVVRDEKKAREVALYRQ
                     GKFREVKLARQQKAKLENMFSNMAAGDVAELNIIVKADVQGSVEAISQSLMELSTDEV
                     KVKIVGSGVGGITETDATLAAASNAIMVGFNVRADASARRVIENENIDLRYYSIIYEL
                     LNDVKAAMSGMLQPEFKQEIIGLAEVRDVFRHPKFGAIAGCMVTEGIVKRNNPIRVLR
                     DNVVIFEGELESLRRFKDDVSEVRNGMECGIGVKNYNDVKVGDQIEVFEVVEVKRTI"
     gene            18110..18490
                     /gene="rbfA"
                     /locus_tag="PXE50_000583"
     CDS             18110..18490
                     /gene="rbfA"
                     /locus_tag="PXE50_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HDL5621519.1"
                     /translation="MSREFKRSDRVAQELQKEVAVILQREVKDPRIGMVTVSDVEVSR
                     DLAYAKIFVTFLFDNDAEAIKQGMQGLEKASPYIRTLLGKAMRLRIVPELRFIYDESL
                     VEGMRMSNLVSSVIKNDEEKHKED"
     gene            18493..19416
                     /gene="truB"
                     /locus_tag="PXE50_000584"
     CDS             18493..19416
                     /gene="truB"
                     /locus_tag="PXE50_000584"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HDL5621520.1"
                     /translation="MSRPRKRGRDIHGVFLLDKPQGMSSNDILQKVKRIFQANKAGHT
                     GALDPLATGMLPICLGEATKFSQFLLDSDKRYLVTAKLGERTDTSDAEGQVVETKAVA
                     VTKSQILAALEKFRGDILQVPTMFSALKHNGKPLYEYARAGITVEREARPITIFELNF
                     IEYKAPFLTLEVHCSKGTYIRTLVDDLGEELGCGAHVTMLRRTAVADYPIEKMMSYAD
                     LQNLAENQPLAELDQHLLPMDTAVSALAKINLSSEQTKAVGFGQRIRFDNLNQLYGLV
                     RLYSEDEQFLGVAEITNDTVIRPNRMINLTE"
     gene            19419..20499
                     /locus_tag="PXE50_000585"
                     /pseudo
     CDS             19419..20499
                     /locus_tag="PXE50_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252783.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
     gene            complement(20537..21061)
                     /gene="tadA"
                     /locus_tag="PXE50_000586"
     CDS             complement(20537..21061)
                     /gene="tadA"
                     /locus_tag="PXE50_000586"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HDL5621521.1"
                     /translation="MFIKPNQTSCPLQISEQDIAFMQYALDLADLAEAKGEIPVGAVL
                     VDKNQQIIGRGWNQTIQLCDPSAHAEMQAIRQAGQTLGNYRLLDCTLYVTLEPCPMCA
                     GAILHSRIKRLVFGASDYKTGAVGSRYHLFEDYKMNHFLEVHGNVLGRECSQKISDFF
                     KQRRLQKKGDALIK"
     gene            complement(21143..22951)
                     /locus_tag="PXE50_000587"
     CDS             complement(21143..22951)
                     /locus_tag="PXE50_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDL5621522.1"
                     /translation="MTTESLTFADLGLPQPILDAVNEMGFVNPSPIQQECIPHLLAGR
                     DVLGMAQTGSGKTAAFSLPLLAQIDPTQRHPQMLVMAPTRELAIQVADACEQFAKNMK
                     GIRVVTVYGGQRYDIQLRALKQGSQVVVGTPGRILDHIRRGTLDLSELKFIVLDEADE
                     MLRMGFIDDVETVMAELPETHQTALFSATMPEPIRRITRRFMKDPQEVKIKATERSAP
                     DIEQSYWLVNGFRKNDALLRFLEVEEFDAAIIFTRTKTGTIDITELCERNGYRTAALN
                     GDMTQQAREQTLDKLRSGRLDILVATDVAARGIDIERISLVINYDIPLEEESYVHRIG
                     RTGRAGRSGRALLFVEPRERRLLRNIENLIKKPINEVAIPNHEILMEKRREKFKARIS
                     KQLEHHDLEKYRELLEDLFTADQDHEELAAAMMMLLQEKQKLILPPDPVVRAARSERG
                     RDRNERNDRRNGREHRENNGVAMDLYRIELGREDGVEVRHIVGAIANEGDISSRYIGH
                     IKLYDKYSTIELPQGMPNHLVQHFAHKARVLSKPMQMTLLGSANSASNANPFEGRGRR
                     GNDRNDRGGRRDGGFNKDRKGGFKEKRFSEKRGRRD"
     gene            complement(23153..24076)
                     /gene="nlpI"
                     /locus_tag="PXE50_000588"
     CDS             complement(23153..24076)
                     /gene="nlpI"
                     /locus_tag="PXE50_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein NlpI"
                     /protein_id="HDL5621523.1"
                     /translation="MVQLFKLFRIRFLLLNLISVLMLSGCTSRYADLVSIKNLALAEL
                     NPQLRFEQEAMVVRLSQVLEEAPLTPSEQADLYFERGVIYDSLGLWSLARYDFAQAIS
                     LNQRMAAAYNYMGLYLLLEGDYDSSIDAFNAVLELDREYSYTYLNRGLAFYYSGRYSE
                     AQRDLLHFYEEDKKDPYRALWLYFNELEFTPTEAKNNLQKRANNLSSDYWGTNIVNYF
                     LGKLNLAQVRAIMERDAKENSSQYAEILTETYFYLAKQQLKLDHKDEAISLFRLALAN
                     QVFNFVEYRFALFELSQIRGMTQTTPVVDKE"
     gene            complement(24157..26307)
                     /gene="pnp"
                     /locus_tag="PXE50_000589"
     CDS             complement(24157..26307)
                     /gene="pnp"
                     /locus_tag="PXE50_000589"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HDL5621524.1"
                     /translation="MTPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTTVFVTVV
                     AKKDVKEGQDFFPLTVDYQERTYAAGRIPGGFFKREGRPSEGETLIARLIDRPVRPLF
                     PEGFFNEIQVIATVVSVNPQISPDLVAMIGASAALSLSGVPFNGPIGAARVGFINDQF
                     VLNPTTSEQKISRLDLVVSGTDKAVLMVESEADILTEEQMLAAVVFGHEQQQVVIENI
                     KEFVKEAGKPRWDWVAPEPNTDLINKVKALAETRLGDAYRIVEKQVRYEQIDAIKAEV
                     IAQLTAEDETVSEGTIIDIITALESQIVRSRIIAGEPRIDGRTVDTVRALDICTSVLP
                     RTHGSALFTRGETQALAVATLGTERDAQIIDELTGEKSDRFLFHYNFPPYSVGETGRI
                     GSPKRREIGHGRLAKRGVLAVMPTAEEFPYVVRVVSEITESNGSSSMASVCGASLALM
                     DAGVPIKAAVAGIAMGLVKEDEKFVVLSDILGDEDHLGDMDFKVAGTRTGVTALQMDI
                     KIEGITPEIMRIALNQAKGARMHILGVMEQAIPAPRADISDYAPRIHTMKIDPKKIKD
                     VIGKGGATIRALTEETNTSIDIDDDGTVKIAATDGNAAKAVMARIEEIVAEVEVNQIY
                     NGKVTRVVDFGAFVSILGGKEGLVHISQITNERVERVADYLTVGQEVQVKVVEIDRQG
                     RIRLTMKDINNTNEANAEETVAENVVETEQENNF"
     gene            complement(26569..27849)
                     /gene="phoR"
                     /locus_tag="PXE50_000590"
     CDS             complement(26569..27849)
                     /gene="phoR"
                     /locus_tag="PXE50_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon sensor histidine kinase PhoR"
                     /protein_id="HDL5621525.1"
                     /translation="MKVKLSLKHFLLELLLAAAVAGVFNLFFPAYFFWFSFCLLVLLI
                     WHHHTESSLLQLLRPNEQSGRSKVTTMEHLSQSAAFYHERLRQDKIKTLRLLSKLNKH
                     IQYLPDAIIICQENGEISWCNNVAQELFEFYWDKKSNKSIFNVIFYPEFKSYFRQQRH
                     HRPLVLLTHNKRYIELNLNRYDSNSRLIVARDVTSFVRLMHSRQTFLANMNHELRTPL
                     TILQGYLEMLENEPHNMALQQKALNAMKEQSQRMTNLLRQLSLLVKIEHSNDSEHNEV
                     QMSALISAIQKNTEILSQNQQILFDIEPNLTVWGDQEQLQSAVSNLIYNAIRHAGEGV
                     TIQICCQRDNQEPNTAIFSVQDDGIGIDAHHITHLTERFYRVDESRSNKTGGSGLGLA
                     IVKHALEQHHSTLEIESEAGKGSRFSFKLPLIKK"
     gene            complement(27852..28538)
                     /gene="phoB"
                     /locus_tag="PXE50_000591"
     CDS             complement(27852..28538)
                     /gene="phoB"
                     /locus_tag="PXE50_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006996031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon transcriptional regulator
                     PhoB"
                     /protein_id="HDL5621526.1"
                     /translation="MNNKILIVEDERAIREMLSLYLSKQYQVIEAEDYQSAINKLGEK
                     PELILLDWMMPGRSGIHLIKYLKKQPETEKIPIIMLTARSSEEDCITGLNAGADDYIT
                     KPFSPQVLLARIEAVWRRSYDPPSNLINIDGLILDQQAQRVLVAEQEVKLSGTEYKLL
                     HFLMTHPEKVYRREQLLDFIWGNDIYVEDRTVDSYIRRLRKSLEPYGFERYIQTVRGS
                     GYRFSNHFQD"
     gene            complement(28622..29392)
                     /gene="pstB"
                     /locus_tag="PXE50_000592"
     CDS             complement(28622..29392)
                     /gene="pstB"
                     /locus_tag="PXE50_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HDL5621527.1"
                     /translation="MLPTDLETKLHINNLNFYYGDFHALKNINMRIAKNKVTAFIGPS
                     GCGKSTLLRTLNRMFELYPNQRATGEINLDGENLLTSDTDISIIRAKVGMVFQKPTPF
                     PMSIYDNVAFGIRLFEKLPKSELNDRVEWALTKAALWNEVKHKLNQNGDSLSGGQQQR
                     LCIARGIAVKPEVLLLDEPCSALDPISTMKIEELINELKHDYTVAIVTHNMQQAARCS
                     DYTAYMYLGELIEFGDTKQIFDKPKFRQTEDYIKGKMG"
     gene            complement(29402..30250)
                     /gene="pstA"
                     /locus_tag="PXE50_000593"
     CDS             complement(29402..30250)
                     /gene="pstA"
                     /locus_tag="PXE50_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005650601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HDL5621528.1"
                     /translation="MKNYQNRRFYCRKIKNVLMLSLAYSAVLFGLFWLVWIIVTLLQK
                     GIPALSWELFTRPTPAPNETGGLRNAIVGSILIVSTATLIATPIGILAGTYLSEYGRY
                     TKLAKFTRFLNDVLLSAPSIIIGLFIYAIYVAQVKHYSGWAGSLALAVLVIPIVVRTT
                     DSMLNLVPNNLREAAAALGCPRWRVITMISYRAARSGIITGVLLAVARISGETAPLLF
                     TALSNQFASLDMNAPMANLPVVIYQYAASPFADWNTLAWAGAMLITLFVLSLNIITRL
                     YFSKTK"
     gene            complement(30247..31206)
                     /gene="pstC"
                     /locus_tag="PXE50_000594"
     CDS             complement(30247..31206)
                     /gene="pstC"
                     /locus_tag="PXE50_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HDL5621529.1"
                     /translation="MHKHKIDNKCLNHPWVEGLFHHTTRFFALLVFALLVVVLVSLLL
                     GSWEALSRFGVSFLWENEWNPVNDRYGALVPIIGTLISAGIALVIAVPVSFGIATFLT
                     ELAPQWLKRPVGTAVEMLAAIPSIIYGMWGLFVFVPLFQEYVQPYLIDTFGQLPFIGM
                     LFSGAPFGIGLFSAGLVLAIMIIPFIASIMRDVFSVVPPLLKESAYGLGSTTWEVIWK
                     VVLPYTKTGVIGAIMLGLGRALGETMAVTFVIGNAFMLPDSVFSPSTSIASAIANEFN
                     EAGGLQKSALMSLGLILFLITSIVLAASRLLIARMGKQEGKRE"
     gene            complement(31287..32324)
                     /gene="pstS"
                     /locus_tag="PXE50_000595"
     CDS             complement(31287..32324)
                     /gene="pstS"
                     /locus_tag="PXE50_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005756281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HDL5621530.1"
                     /translation="MAKRFKLLTVLGISFSLSVAANAQTITGAGASFPYPIYAKWAGL
                     YEKETGNKINYQSIGSGGGQQQIIAKTIDFGASDDPMKGETLAEHKLLQFPAIIGGTV
                     PVVNIPELKSGELKLSGKVLADIFLGKITQWNDPAIVALNQDIALPAKTILVVRRSDG
                     SGTTFGWTNYLSKVSAEWKEKVGEGKSVKWPVGQGGKGNEGVAAYVKQLKYSIGYVEY
                     AYAKQNALAWVSMQNADGKFVQPSRETFAAAAANADWSQTAGMGVILTNEAGEKAWPI
                     TAASFILIHQHSDKPEQTKGVFKFFDWAFKHGKDAAAELDYVPLPDNVVEKIQTQWKT
                     EVKDGQGNSLY"
     gene            32509..34755
                     /gene="parC"
                     /locus_tag="PXE50_000596"
     CDS             32509..34755
                     /gene="parC"
                     /locus_tag="PXE50_000596"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HDL5621531.1"
                     /translation="MTTEINYEGIEQMPIKRFTEDAYLNYSMYVIMDRALPFIGDGLK
                     PVQRRIIYAMSELGLNASAKYKKSARTVGDVLGKFHPHGDSACYEAMVLMAQPFSYRY
                     PLVDGQGNWGAPDDPKSFAAMRYTESKLSKIAEILLGELGQGTVDYQPNFDGSLEEPK
                     YLPARLPHILLNGTMGIAVGMATDIPPHNINELADASVMLLDNPKATLDDVLSVVQGP
                     DYPTEAEIITPKAEIARMYEQGRGSIKMRAVWKKEEGEIVISALPHQASPSKIIEQVA
                     TQMRNKKLPMVDDIRDESDHENPIRIVIVPRSNRIDFDALMDHLFATTDLEKSYRVNM
                     NMIGLDGKPAVKNLLTILNEWLSFRRTTVTRRLNYRLDKILNRLHILDGLMIAFLNID
                     EVIEIIRNEDEPKAELMARFNLTDVQAEAILNLRLRHLAKLEEHQLQAEKSELEKERD
                     ELQLILGSERRLNSLIKKEIQADAKAFASPRRSPLVERAESKAIAESDLTPTEDVTVI
                     LSEKGWVRCAKGHDIDVQALSHRAGDGYLAHARGRSNQPVVFLDSTGRAYALDPTSLP
                     SARSQGEPLTGKITLPEGAVVQQVLMASPETKVLMASDSGYGFICTFADLVSRNKAGK
                     AVISLTENAKVLPPQLLENDENLSLVAMSNVGRMLVFPVSELPQLSKGKGNKIINISA
                     AAAKSGDEYLARLLVIKPTNSLVFVSGKRKITLKPSDVDNYRGERARKGSQLVRGLST
                     NSTVEIVE"
     gene            complement(34826..36178)
                     /gene="lysC"
                     /locus_tag="PXE50_000597"
     CDS             complement(34826..36178)
                     /gene="lysC"
                     /locus_tag="PXE50_000597"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-sensitive aspartokinase 3"
                     /protein_id="HDL5621532.1"
                     /translation="MSHLSVAKFGGTSVANFDAMTSSANIVIADANTRVVVLSASAGV
                     TNYLVELANGCEKEHRDEVIAAVRQIQYNIIEKLQHQDAVKAEIDELLERIETLAESA
                     SLATSAALSDELISHGEMMSTKIFTQLLIERGHPAVWVDVRDVVATNSHYGKAAPNDE
                     KTQQQSDNVIKPLIASGKIVITQGFIGRDDEGKTTTLGRGGSDYSAALLAEVLNANDV
                     LIWTDVPGIYTTDPRVVPNAQRIDTMAFNEAAEMATFGAKVLHPATLLPAVRSNIPVY
                     VGSSKAPEQGGTWVTRDPQPRPTFRAIALRRNQILLTLSSLSMLHAQGFLANVFAILA
                     KHKISVDVITTSEVSVALTLDKTGSASSGADMLSAELLDELNAYCNVQVESDLALVAI
                     IGNNLHAQSGVAKKLFHTLENYNIRLISYGASSNNVCTLVKNAEADDVVRSLHKGLFE
                     "
     gene            36741..38171
                     /locus_tag="PXE50_000598"
     CDS             36741..38171
                     /locus_tag="PXE50_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIBC"
                     /protein_id="HDL5621533.1"
                     /translation="MSTLTYLQKIGRALMVPVAALPAAALLMGIGYWIDPDGWGTNSQ
                     LAALLIKSGAAIIDNMSILFAVGVAFGMSKEKDGAAALSGLVGYLVITTLLSPGTVAQ
                     LKGIAVDQVPAAFGKINNQFIGILVGVISAEIYNRFYQVELPKALSFFSGKRLVPIVV
                     SFILLYVWPVIFGALVSFGESIKDMGALGAGIYAFFNRLLIPVGLHHALNSVFWFDVA
                     GINDIPNFLGGAKSLAEGKAVIGVTGMYQAGFFPMMMFGLPAAALAIYHSAKPAKKMQ
                     VASIMFAAALASFFTGITEPLEFAFMFVAPVLYVVHALLTGLSVYIAASMEWIAGFGF
                     SAGLVDLVLSTRNPLAVQWYMLLAQGIVFAVIYYVLFRVVIQAFNLKTPGREEDSEVQ
                     TVNTVSRSEQAAKFVEALGGKENITSIDACITRLRLTLNDTAKADETKLKALGSKGNI
                     KLGENGYQVILGPEAEFVADAMKKLN"
     gene            complement(38235..38564)
                     /locus_tag="PXE50_000599"
     CDS             complement(38235..38564)
                     /locus_tag="PXE50_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF496 family protein"
                     /protein_id="HDL5621534.1"
                     /translation="MSEVNKSFHDMLEYVHLYRLKNKLHRETADNDRKIRDNQKRVLL
                     LDNLTQYITDEMSIEEVRAIISNMRDDYENRVDDYMIRNAELSKQRREIRQKMASHKQ
                     APTNKKA"
     gene            38760..40262
                     /gene="ppx"
                     /locus_tag="PXE50_000600"
     CDS             38760..40262
                     /gene="ppx"
                     /locus_tag="PXE50_000600"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HDL5621535.1"
                     /translation="MSSNIAPREFAAIDLGSNSFHMIVARIVNGSIQVLSRLKRRVRL
                     ADGLDENLVLSQDAIDRGIACLALFAKRLEGFSAENVKVVGTYTLRRAINNQAFLEQA
                     KAVFPYPISIISGQQEARLIYSGVSHTQPETGRKLVVDIGGGSTEMTIGDDFTPIRAE
                     SRHMGCVSFAKRFFPQGELTIERFDSAYQLAMEKIEDLMWEYKELGWDYALGSSGTIK
                     TVHQVLIANGYRDGLITESRLQKIIDICLEFKSLNEIKLRGLLDERADVLVPGLAILL
                     ALFHTFRIDVLRYSNGALREGVMYGLEKSFQVGDIRQRTAEALAEQFALDKQQAKRVE
                     HTALILFDQIKTWKNRRQVQDLRSMLKWASLLHEIGIVVNHNNVHRHSAYLIANRDLP
                     GFDFEQQTLLSVLMRYHLKGFKRSDIRSINRYQCRDVLTLVRVFRLAVLLNRSRQATV
                     VPKQLNLVIENNAWQLTFEQGFLANNPLISIDLEEEQKILASTNLQFAVS"
BASE COUNT        12128 a         7547 c         9080 g        11640 t
ORIGIN      
        1 caacacctaa aagatttaac taataaagca cgtgaagctt tagataagat tgatcaaaat
       61 ttagaggctt tagaagagtt tagagtcgaa tattttggta aaaaagggca ttttacaacg
      121 ttaatgcaag aattacgcaa tattgcagcg gaagaaagac cggcaatcgg agcaaaaatt
      181 aatgaagcaa agcaagttgt gcttgatgtg ttaaatgcca aaaaagaaga atgggaacaa
      241 gctgtattaa atgcaaaatt agctaatgag agcattgatg tttcactgcc ggggcgtaaa
      301 actgaattag gtggtttgca ccctgtttct atcactattg agcgtgtggt gaaatttttc
      361 tctgaattag gttttaccgt agcaaacgga cctgaaattg aaaccgatta ctataacttc
      421 gatgcgttaa acattccgga tcatcatccg gctcgagcgg atcacgatac gttttggttt
      481 gatgccaatc gtttattaag aacccaaacc tcgggtgtgc aaatccgtac aatggaaaat
      541 gtaaaaccgc ctatccgtat tgtggcaccg gggcgtgtat atcgtaatga ctacgaccaa
      601 acccacacac cgatgtttca ccaaatcgaa ttgttatatg tggataaaga agcaaacttt
      661 accgagttaa aaggcttaat tcacgatttt ctcaaagcat tctttgaaga agatttacaa
      721 gtgcgtttcc gcccgtcatt cttcccattc actgagcctt ctgcagaagt agatgtaatg
      781 cgtcaaaacg gcaaatggtt agaagtgtta ggttgcggta tggtacaccc gaatgtgtta
      841 cgcaatgtag ggattgaccc tgaagaatat agcggttttg ctgtgggaat gggcgtcgag
      901 cgtttaacga tgttacgcta caatgtcacg gatttacgtt cattctttga aaatgactta
      961 cgtttcttaa aacaatttaa gtaatacaag cggttaaaaa tttagaaaat tttacaaata
     1021 ggatagaaat aatgaaattc aatgaatctt ggttgcgtga atgggtaaac ccagcaatta
     1081 gcacagaaca gttatgcgac caaattacaa tgttagggtt agaagttgac gatgtagagc
     1141 cggtagctgg tgcgttttcg ggtgtagttg tgggtgaagt ggtggaatgc gcccagcacc
     1201 cggatgctga caaattgcgt gtcactaaag tgaatgttgg tggcgaacgt ttattagata
     1261 ttgtttgtgg tgcaccaaac tgccgtcaag gtttaaaagt ggcttgcgct gttgaaggtg
     1321 cagtgctacc gggcgatttc aaaattaaga aaaccaaatt gcgtggtcag ccttcagagg
     1381 ggatgttatg ttcttactca gaacttggga ttaaagaaga tcatagcggt attattgaat
     1441 tacctgctga tgcacctatt ggtcaagatt tccgtgaata tttaaattta aatgatgtgg
     1501 cgattgaaat cagccttacg ccaaaccgtg ccgactgctt aagcattgcc ggcattgctc
     1561 gtgaagtggg ggtgattaac cgtgtcgatg tgaaagctcc aactattaca gatgtaaaag
     1621 ccacgatttc agataaagtt tcagtggaat tacaagcacc ggaggcttgc cctcgctatt
     1681 tagcccgtgt ggtgaaaaat gtgaatgtca aagcgacatc gccactttgg ttacaagaaa
     1741 aattacgccg ttgtgggatt cgctcaatcg atccaatcgt tgatattact aacttgagcc
     1801 ttttagaatt agggcagcca atgcacgcct ttgatgcagc gaaaattgaa ggtggcattc
     1861 aagtgcgtat ggcaaaagaa ggcgaagaat tggtattgct agatggcaca aacgctaaat
     1921 tacaatcgaa taccttagtg attgctgata gcaaaggggc attggctatg gcaggtattt
     1981 tcggtggcga agccagcggg gtgagcgaga atacgaaaga tgtggtgtta gagtctgcat
     2041 tttttgctcc attagcgatt accggtcgcg ctcgtcaata tgggttacat accgacgcat
     2101 cacaccgttt tgagcgtggg gttgatccag aattaactcg tcaagcaatg gagcgtgcaa
     2161 cggcattatt actggaaatt tgcggcggtg aagcaggtga aattgtggaa gccgtgagcc
     2221 aagaaaacct accaaaacgc aatactgtca cgcttagacg cagtaaatta gattcggtga
     2281 ttggtcatca tattgacgat gcaacggtaa ccgatatttt aacccgctta ggcttgaacg
     2341 taacatttgc ggataatagt tggacggcaa ttgctccaag ttggcgtttt gatattgaaa
     2401 ttgaagaaga tttaattgaa gaaatcgcgc gaatttatgg ctacaacagt atcccaaata
     2461 attcgccact tgctcattta acgatgaaag gtacgccgga aaaattactg gaagcaaacc
     2521 gtattcgtat ggcattggta gatagtgatt accaagaagt gattacttat agctttgttg
     2581 atccgaaaaa acaatcatta ttgcacccac agcaagaagc cttgatttta ccaaacccga
     2641 tttcaagtga aatgtcggca atgcgtgttt ctcttttaac cggtttgttg gacactatcg
     2701 tgtataacca aagccgtcag caaaaccgtg tgcgtatttt tgaagcaggt ctacgtttta
     2761 ttccggatag caatgcggaa tcaggcgtgc gtcaagaatt tgtttttggt gcggcgattg
     2821 taggcgataa acgtccggta cattgggaaa acaaatcaga agcagccgat ttctttgatt
     2881 taaaaggcga tattgagcgt attctttctt taacctctat ccgccacgat ctgcaatttg
     2941 tcgcaaaaca gttcccagca ttacacccgg ggcaatcggc tgcgattatg cttgatggca
     3001 aagaaattgg ttttatcgga actgttcacc cgtcaattgt gcaaaagttt ggcattaaag
     3061 gcaaaccgat tgtatgtgaa attctagcat cagctattgc agagcgtccg gttacacaag
     3121 cgggcgaaat ttctaaattt cctgcaaata accgtgatat tgcggtagtg gttgatgaat
     3181 ctgttcctgc aggtgaggtg ttagaggctt gtcgtaaagc tggtggtaat aaattagtgg
     3241 cagtaaattt atttgacgtt taccgtggtt cgaatttaga aagtggtaag aagagtttag
     3301 ccattagctt aacggttcaa gataatgaaa aaacattaga agaaaatgaa atcaatgcgg
     3361 taattcaagc ggtattagct gaattagcaa cacgtttcaa tgcggtactt cgtgattaat
     3421 cagtaaaata tggctgattt attttatcag ccataacaat aaactaagga taaatgatgg
     3481 cgcttaccaa gattgaaatt gcagaaaacc tgattgaaaa atttgggtta gaaaagcgtg
     3541 tagcgaagca atttgttgaa ttgttctttg aagagatccg atcctccctc gaaaatggtg
     3601 aagaagtgaa attatctggt tttggtaatt tttcactgag agaaaaaaaa gctcgtccag
     3661 gaagaaatcc taaaacgggg gaaaatgtgg ctgtttcagc ccgtcgagta gtagttttta
     3721 aagctgggca aaaattacga gaacgtgttg agcaagctag ctcccaatca taggggcagt
     3781 tatattagtt agatttaatg tggagtaata aatgaaatta accaaacggt ggctttcctt
     3841 aggttgtttg ttagctatta cagcgatgtt agtggcttgt tcaagttcag atacaacctc
     3901 taagtctcaa gtaaaaagta aagtttatcg ttcaatatac caatcagacc tttctgatcc
     3961 tattatggca attagtcgat taagtgaaca tcaacacgaa tggaaaggca ctcgctatcg
     4021 tttaggtggc aatagcaagg ctggcatcga ctgttctggt tttatgcaag tcacttttaa
     4081 agatcttttt gggatagatt tgccgagaac caccacagag caggctaagg ctggtgagcg
     4141 tatatccaaa gacgaattgc gtacaggtga tttagttttt ttcaagacag ggcgtggtcc
     4201 aaatgggaaa cacgttggtg tttatgtaaa aaatgggcaa tttcttcacg cctcaacaaa
     4261 gggaggggtg atttattctg atttggattc gccatattgg tctaaggctt tctggcaggc
     4321 tcgtcgttta taatttaggg taacatacat gctgaaaaaa atcggacaag cggtcatatt
     4381 tggacttttt tgtgcaattt taattttgtt tgtagctcca attattcaga gtaaagggag
     4441 ttcgttttca ttatcagcat tcactcaaaa agagattgta agctacaatg cagcggttaa
     4501 aatagcctcc cccgcagtcg ttaacgtata tagccgaaat tttagttctg aaaatgaaac
     4561 atttgaagtt aagaatttag gttcgggtgt gattatgagt agcgatggct atattttaac
     4621 taacaggcat gtgattgaag atgcggatca aatcgtgatt gctttgcaaa acggtgctat
     4681 ttcgactaat gtaaaattag tcggcgatga ttctttaact gatttagctg ttttaaaaat
     4741 tgagggtgag aatttaccta ctattccaca aaatccggag cgcaaactac aaattggcga
     4801 tgtggtgttg gcaattggta atcctttgaa tttaggacag agcattacgc aagggatagt
     4861 cagtgctatt gggcgaaaaa ccttaacaga aagtggtaga caaaatttta ttcagacaga
     4921 tgtttccatt aatcaaggga actcaggtgg tgctttaatt aatactgctg gtgagctaat
     4981 aggtattaac actttgcgtt ttgggaaaaa tacgaatgaa ttgtcagagg gcctaaattt
     5041 tgcgattccc attaatctgg cgaatcaaat tatgagtaag atcattaaag atggccgagt
     5101 tattcgtggc tattttgggg taagtacaga tttgcttgac accgcaaaaa tgcaaggtta
     5161 tgaaaaaggg gtgatcattg ttaatgtaga taaaaatggg ccagccgcaa aagcggggat
     5221 tcaagcaggt gacttagtgc ttaaagtcgg agatattgag gcattctctc cttctcaaat
     5281 gatggaagag cttgctgaaa tgaaacctta tactacagta aaagtattgg ttcaacgtga
     5341 tgaacaatta cttaactttg atgtaactat tactgagtta cagactcaat agggtagaaa
     5401 atgaaaaaaa tagtgattac agttgatggg ccgagtggtg caggtaaagg aacgttatgt
     5461 catgcattgg ctgaaaaatt agggtttgat tttttagatt ctggagcctt ataccggatt
     5521 actgcattaa gcgcaattaa aaaagaggtt ccccttgatg atgaggaaaa actagcggaa
     5581 gttgggcgta atcttgatat tcaatttttg ccagaaaatg gcgagattca ggtgattttg
     5641 gaaggagaaa atgtaggcga cttaatccga acggcagaag caggtcaaaa tgcctctaaa
     5701 gtcgctgctt tccctttggt acgtgaagca cttttagaac gccaaagagc ctttagtagc
     5761 gaaaaaggtc tgattgcaga tggacgagat atggggacag ttgtgtttcc tgatgcacaa
     5821 attaagctgt ttttagatgc aagtgccgaa gaacgcacaa aaagacgtgt aaaacagttg
     5881 caagaaaagg gatttaatgc taactttgac gagattttag ccgagataaa agaacgtgat
     5941 tttcgcgata gaaatcgatc agtcgcgcca cttgttccgg ctaaagatgc gttgctgtta
     6001 gattcaacgc atttatcaat tgaagatgtg attaaccaag cattaaatca tatcgctcaa
     6061 tacattaaat tttagtttgt tgcttcacat aggatttgtg tagcttttat tatcaacccc
     6121 gtttaacagg acgttagatg gatgtttatt tttaagaaga tttattatgt cagaattatc
     6181 gtttgctcaa ctacttgaag aatcatttgc agctacacca cgtttaggtg atgttgttaa
     6241 aggtactgtt gttgctatcc aaaaaggctt agttattgtt gatacaggtt tcaaatctga
     6301 atctgcaatc gatgcctcag aatttactaa cgcacaaggt gaattagaag ttcaagtggg
     6361 tgatgaagta gatgttgttc ttaaagctgt agaagacggt tttggtgcaa cagtagtttc
     6421 tcgtggtgat gcaaaacgta acgaagcttg gattgcttta gagaaagcat ttgaagaaca
     6481 agctacagtt atcggtttcg taaatggtaa agtaaaaggc ggtttcactg ttgaattaaa
     6541 cggtgttcgt gcattcttac ctggttcatt agttgatact cgtccggttc gtgattcttt
     6601 aaacctagaa ggtaaagagt acgaattcaa agtaatcaaa ttagatcaaa aacgtaacaa
     6661 cgtagtagta tctcgtcgtg ctgttatcga aacagaaagc aaccaagatc gtgatgcggt
     6721 attagcaaac ttagttgaag gttctgaagt taaaggtaca gttaaaaact taactgacta
     6781 cggtgcattc gtagatttag gtggcgttga cggtttatta catatcacag atatggcttg
     6841 gaaacgtgtt aaacacccaa gtgaagtggt taatgtaggc gatgaagtta ctgttaaagt
     6901 attaaaattt gacaaagaca aaactcgtgt atcattaggc ttaaaacaat taggtcaaga
     6961 tccttgggct gtaattgctg aaaaccaccc ggtaaacagc aaattaactg gtaaagtaac
     7021 taacttaact gactacggtt gcttcgttga gattttagac ggtgttgaag gtttagttca
     7081 cgtttcagaa atggattgga caaacaaaaa cattcaccca tctaaagtgg ttaacgtagg
     7141 cgatgtagtt gaagtaatgg tacttgaagt tgatgaagaa cgtcgtcgta tctcattagg
     7201 tttaaaacaa tgcaaagcaa acccttggga acaatttgcg gcaactcaca gcaaaaatga
     7261 taaagtatca ggtaaaatca aatcaattac tgacttcggt attttcatcg gtttagaagg
     7321 tggtattgac ggtttagttc acttatctga catttcttgg aatgtttcag gtgaagaagc
     7381 agttcgtaac tacaaaaaag gtgatgaagt agaagctgtt gttctacaag ttgatgcagt
     7441 gaaagagcgt atctctttag gtatcaaaca attagaatct gatcctttca caaactttgt
     7501 agatggtact aaaaaaggtg caatcttaac aggtaaagtt gtagaagttg atgctaaagg
     7561 cgttaaagtt gaattggaag gtggcgttga agcatttatt cgtgcaaacg aagcaactgc
     7621 tgagcgtgta gaagacatca cttctgttat ttctgttggc gattcaatcg aagcgaaata
     7681 caccggtgtt gatcgtaaat ctcgcgtagt taacttatct gttcgtgcaa aaaacgaagc
     7741 tgaagaatca gcagcaattg cacaagtgaa caaagaggaa gttgttgtac ctaatgcatt
     7801 tgctgaagct ttcaaagcag ctaaaggcga ataattagta tagactaatc taaaatgggt
     7861 atgttttgaa catacccatt taaacttaga aatgccattt tgaatactta ttttcataat
     7921 aaatgattat tcaaaataga attaattttt ggtagaaata atatgactaa atctgaatta
     7981 attgagagtt tagcatctaa aaatccaagt ttaccaatta aaatggtgga gcattgtgta
     8041 aaagagcttt tagagcagtt aacggctact ttagaagaag gtgaaaggat agaagtaaga
     8101 ggatttggta gtttttctct acattatcgg cagccgcgtt taggtcgcaa tcccaaaaca
     8161 ggagaaagtg ttcttttagg cgcgaaatat gtaccacatt ttaaagctgg taaagatcta
     8221 aaagagagag ttgatctgct ttaagtctta ttaattcaat aatcgtagta aggagattat
     8281 atgattaagt atattttagg tattttaatt gtgattgcag ttattattgt cgctgttacg
     8341 attggagcca ataatgatca acttatcacc tttaactata tttttgctca gagtgaatta
     8401 cgcttatcaa cgttagttgc gattttattt ggcttaggat tgattcttgg ttggttggta
     8461 acgggtattt tttacttaaa aattaagttt caaaacgttg ctttaaatcg tcgtgtaaag
     8521 cgccaagctc agcaaataac tgaattaacg actccaaagg ctgaataatc aatgcttgaa
     8581 ttattgttcc ttttattgcc tattgcagca ctatatggtt ggtatatggg acaacgtagt
     8641 gcaaagaagg atcaagaaac cgctagtaat aagttctctc gtgagtatgt tacggggtta
     8701 aattttcttt tatctaatca gcaggaaaag gcggtggacc ttttcctctc tatgttacaa
     8761 aaacaagaat ccgaaaatca tattgcatct gaatcccaat ttgaagcgga gttaacccta
     8821 ggtaatcttt tccgttcaag aggtgaggta gatcgtgcct tacgtattca ccaaacatta
     8881 gtgaatagcc ctcattattc atttgatcaa aaattattag caaaacagca attagctaaa
     8941 gactttatgg ttgcaggttt ctatgaccgt gcagaaaatt attacatttc attagttgat
     9001 gaacctgagt ttgctaaata ttctttatct cagcttgctg ttatttacca aaaaaccaga
     9061 gaatggaaaa aagcgattaa tgttacagaa aaacggcttc gaatagagcc ggatgcagat
     9121 aaaataccgc tttcacattt ttattgtgaa tatgcgcaag gggttaaatt tgatgataaa
     9181 gcggcattta ttgaatcgtt aaataaagcg ttagaatatt atcctcaatc cacacgcgct
     9241 tctataatat taggtgattt ctatttagaa gagggagaat atctaagagc attaagctat
     9301 ttcgaacaga ttcttgtgca agaccctgat tatattagcg aagtgcttgg acgaattaag
     9361 caaagctata tggctcttga ggacttaaat ggctatgagt tatttctcat tcgagcaaac
     9421 cgagtaaaac ataatagtag tgtagatatt gctttaactg aatttattga agaaaaagat
     9481 ggtatcaatg ctgcacattc taaactatac cagcagttga gtacttatcc gaatttaatt
     9541 acttttcacc gctttattcg ctatcaagca gattttgcgg aggaaggaaa tggtaaggaa
     9601 agcttagttt tattacataa tatggtggga aatcagataa aacgcagctt ccaatatcgc
     9661 tgtttaaatt gtggttatca aagttatcgc ttaatgtggc aatgtccttc ttgtaatcaa
     9721 tgggaaaaaa ttaagccggt acaaagtatc gaaggtatta ttcaataaag aaagaatctg
     9781 aggaattgaa aatgaacaat aaagtaattg ttgcgttaga ctatgaaact gaacgtgaag
     9841 cattagaatt tgtggatttg gtcgatccgt cgctttgtcg tttaaaagta ggcaaagaaa
     9901 tgtttacaac cttaggcaca aattttgtca aacaattaca cgaacgtaaa tttgatgtat
     9961 tccttgattt aaaatatcat gatattccaa atacggttgc tcgagcagta cgttctgctg
    10021 ctgatcttgg tgtgtggatg gttgacttgc atgcttctgg tggtttagcc atgatggaag
    10081 aggcaaagaa aattttggag ccttatggca aagaggcacc attattaatt gcagtgacgg
    10141 ttctaaccag tatggaagat ttggatttgc ttcaaatagg tattaatgct tcgccgatgg
    10201 aacaagttat tcgtttagca catttagcac aacgggctgg tttagatggc gtggtatgtt
    10261 ctccacaaga agttgaggta ttacgtaccc attgtggtca agattttaaa ttagtgaccc
    10321 caggaatccg gccaaaagga acagattttg gggatcaacg ccgagtgatg acacccaaac
    10381 aagcagtaga aacaggctca gattttttgg ttattggtcg tcctattacc caagctcaag
    10441 atccgcttgc ggtattaaaa tctattaacc aatctatcag ttaattcatt gcatttttaa
    10501 tgaaggcgga aaaatttccg ccttttttaa tcaaacaagc ggttattttt gaggaaaaat
    10561 ttgtaaatga cattagtcta ttcaacggaa acaggcagaa taaagtccga agtaataaaa
    10621 gaagaacgcc ctaaagggga tggtattgtg cgtattcaac gtcaaacaag cggtagaaag
    10681 gggaaaggtg tttgccttat caccggtctt gatttagagg ataaagcctt aaattctctt
    10741 gcttcagagc ttaaacgtaa attgggttgt ggtggctcat ttaaagatgg agtaattgaa
    10801 atccagggcg ataatcgagg attcattaag caaatcttag aacagaaagg tttcaaagtg
    10861 aaactggcag gtggttgagt tttaaacaat tatcagctgg cagtttttaa ataacttcat
    10921 tttatttgaa acttcattcc tacttttctg cctaaaactc acgattaagg agaaaaacta
    10981 atgtggaaga aaacgttgat tgctgtattt ttagcaagcc aatatgcttt tgcggtagga
    11041 accgggaaag aaccatcaaa aagttatact gaaacagaat taaaacaatt aaaaaatgat
    11101 tggttagcga tttatcaaaa agagctacag tatgcagaaa atttgcgttt aaaacagaga
    11161 gaaaattttc agcaaattaa ttatttggca gatgcagcga ttagtcagaa gaatttatca
    11221 ctttcaacgg agcagataat tcagcgttta ttactaacct tagcgggtta tccgttggag
    11281 atgaaagctg aatggaagct gctaaatgct aaaataacgt taaaacaagc cacagaaagt
    11341 gaagttaaag catttatttc aaaatatcct gattctttgt atcaaaggca gttacagaac
    11401 ttgatgtttg agctgctcta tcgtgaacag aaatttccgg agttactgga atatgctcaa
    11461 aatgtaaaac agagtagtct tgccgaccaa tgccgtttat tttctgctcg ttatgaactg
    11521 gcagcaagta aagctcaaat caatccggaa gtttctcaag taactgagca aaaagcagaa
    11581 aatgcagaac tgcttgcttt ggtgcaagag tttgatcgct tttggcttgc tacgccgaaa
    11641 ttaacttctg attgtgcgaa tttagaaagt tattggcggg atcaggggct taaaaccgat
    11701 gaaaaaatgc gtttgaaagc ggtcgaatta attaaacaaa atgcaaatgc agaattggcg
    11761 aatttggcgg caaatgtaaa taatgagaat ttgaaaatct ggctatcttc cgttgaaaag
    11821 gtagcgaata atccggcaga tttgcaaaat tttatcgaaa atcaaccgct tgattcccca
    11881 ttttatgctg ataataaagc gattattcag caactctttg ctaaatatgt gcgaacttta
    11941 tcggaaaata tggagaaccc gagtttccag cagtatcaaa cgtgggcaga gaagtatcaa
    12001 ctttccagcg aggaaatcaa tggctggaaa aatgctttta tcactcgatt ttttgataac
    12061 ccagaaccaa cattccaatt ttggcgtgat gagcaaatca agttgctcaa gacagacaat
    12121 ttaactgaac gccgtttacg aatggcaatt tggcaaaaag cagatttaaa tgagtggctg
    12181 gttctgctat ctcagcaggc gaaagaaaaa gcagaatggc gttattgggc tgcgaaagag
    12241 gagaaaaacg aagcgaagcg taaagttgat tttgaaagct tagctaaaga gagaggcttt
    12301 tatgctatgt tggctgctca acaattaggc attgtttacc aaatcccgat gcttgaagtg
    12361 cctgaattga cacaagcaca gcttgaattg tatgcaaacc aattagctcg tattcaagag
    12421 ttgcgagagc tagggcagtt tgaccaggca agaaaaatat ggattgactg gataaaaaac
    12481 atcaagccgg aagcaggtga aaatacacca actaaaatcc agttagccct gataaaatat
    12541 gccaaggata aaaattggta tgatttggcg gtggaaggta caattcaaac aaaagccttt
    12601 gattatcttg atttgcgatt accgaatgcc tattcggatt ggttcgattt acatctgcaa
    12661 gataaaaaaa tcagcaaaac gtttgctcag gcgattgctc gtcaagaaag tgcgtggaat
    12721 gctcaggctc aatcgcacgc taatgcgaga gggctaatgc aactgttacc gacaacagca
    12781 caaaaaaccg ctaaagataa cggtttaacc ttcaaagatg gcaatgatct ctttcaaccg
    12841 tttaacaata ttatgttagg cacaacccat ttaatggagt taaacgaaaa atatccgaat
    12901 aatcggattc tgattgcctc tgcttataat gcaggagcag ggcgtgttga gcagtggctg
    12961 aaacgtagta acgggcagtt agcaatggat gaatttattg ccagtatccc gttttatgaa
    13021 accagaggct atgtacaaaa tgtgctggcg tatgactact attatcaaat gctctatagc
    13081 gatataaatg ataaaaatgg attaaaaatg ttctatcaag aggaattaac aagaaaatat
    13141 taaaaaatgc ttgtgttttt gtgtagaacc gctataatgc accccatcag acgcggggtg
    13201 gagcagcttg gtagctcgtc gggctcataa cccgaaggtc gttggttcaa atccggcccc
    13261 cgcaaccagt tttaagctca cagctttggt taaagttgtg agttttgttt tatatgctgt
    13321 agcaaatttg caaaaaattt ggcaaaaaag accgcttgtt gtggttgcta cagcaaaaaa
    13381 caaaccgctt aaagccccac ggtttcccgt ctggggcttt tttgcggaaa ttggtacagc
    13441 attaacgtat caaagctggt ttatccggct ttttttatat ttggagatta tgacttggca
    13501 actttagaac aaaaattaga agatttagtg ctcgattcta ttgaagcatt aggctttgaa
    13561 ttagtcggca ttgaatgcca acgtgcaggc cgttttttaa cggtgcgttt atatattgat
    13621 aaagaaggtg gcgtgacgat tgatgattgt agcgatgtca gccgccaagt gagtgcgatt
    13681 tttgatgtgg aagatccgat tgccgataaa tataacttag aggtttcttc accagggtta
    13741 gatcgtccat tatttaccgt tgcccactat gagcgtttta tcgggcaaga tgtagtgatt
    13801 catttacgca ttccgatgtt cgatcgccgt aaatggcaag gtaaaatcaa acaagtagaa
    13861 ggtgatttca tcactttaac ggtagaaaat gaagatcgcc agttcgcatt tggcaatatt
    13921 caaaaagcaa atttagttcc ggtttttaat ttttaagata aaggtaaact gacaaaatga
    13981 gtaaagagat tttattagct gcggaagcag tttcaaacga aaagcaatta ccaaaagagg
    14041 caatttttga agccttagaa accgctttaa ccattgcaac caaaaagagc cgtgatttag
    14101 atattgacgt gcgtgtggtg gtagatcgta aaaccggtga tttccaaact ttccgtcgtt
    14161 gggctgtggt tgaaaatgtg aataatatga cccgtgaaat cagcttagaa gcggcacaat
    14221 ttgaagatcc aaacgtacaa ttaggcgatt ttattgaaga tgaagtagag tctatcgagt
    14281 tcggtcgtgt ggcgattcag acttttggtc aggtagtcaa aaccaaaatt cgtgaagcgg
    14341 agaagacgaa aatcattgat gaattccgtt cggatttagg caaaattatt cttgccactg
    14401 tgaaaaaagt aacccgtgat aatattttcc ttgagttaca aggtaaatca gaagatatca
    14461 aaggcgaagc ggtcattgtg cgtgaagata tgatcccacg tgaaaacttc cgcccgggtg
    14521 accgtgtgcg tggtgtgtta tacgaaatca agcctgaatc aaaaggacct cagcttttcg
    14581 ttacccgtgc taaaccggtg atgttagaag agctattcaa attggaagtg cctgaaattg
    14641 gcgaaggcgt aattgagatc aaaggttcag cccgtgatgt cggctctcgt gcaaaaattg
    14701 ccgtgaaaac ccacgataaa cgtattgacc cggtaggggc ttgtgtgggt atgcgtggtg
    14761 ctcgtgttca agctatcagc aatgaattag gcggcgagcg tgtggatatc gtactttggg
    14821 acgaaaatcc ggctcaattt gtgattaatg caatggctcc ggcagatgta agctctattg
    14881 tgattaacga tgaaactcac tcaatggata ttgcggttga agcgaaaaat ctggctcaag
    14941 ctatcggtcg taacggtcaa aacgtgcgtt tggcgacaca attaactggt tgggcattaa
    15001 atgtaatgac cgttgaagag ctaacgaaga agagcgaaga agaagatggt aaagtcatca
    15061 atttattaac ttctgcttta gaaattgatg aagaatttgc tcaagtttta attgaagagg
    15121 gctttacgtc tcttgaagcg attgcttatg tgccggttga tactttaacg gcgattgacg
    15181 gtttagaaga tgaagattta gtcgaagaat tacaatctcg tgccaaaaat gcgatcacga
    15241 aaaaagcgtt agaagaagag aagttattaa aatcagctca aattgaagaa aaattattaa
    15301 cgcttgaagg tatggatcgc catatcgcat tcaaattagc tgaaaaacag attacgactc
    15361 ttgaagaact tgcagagcaa ggtgttgatg atttagccga tattgaagaa ctttcagaag
    15421 agaaagctgg cgagctaatt atggcagcac gccaaatttg ttggttcaac taagcaaaga
    15481 ggataataaa atgacagaag agaaaaaaac actttcgctt ggtggcgctc gcaaagcgag
    15541 taaagtgaat acaaccacaa ccagtggtaa agtaaaagcg gttgaagtaa aagagaaaaa
    15601 accgaaaatt gatgcaaaag cattgcaaga aaaagcagca aaagaagctg ccgcagcgaa
    15661 agctagagct gaaaaagaag cagctgaaaa gttagccaaa gaaaaagccg aagctgaagc
    15721 taaagagaaa gctgcaaaaa aagcagcaga atcgaccgct agtaaaccga tttctgtgcc
    15781 ggtaatgcca agcagcaaag caaaagaaga aaaaccgaaa gcacaacagg tacagccaaa
    15841 acaagagaaa gcggttgatc ctgaaaaaga agctaaacgc aaagaagaag ctgagttacg
    15901 ccgtaagcaa gaggaattag ctcagcaaaa agcggaaatg gaggcaaaac gtgctgcaga
    15961 aaatgcccgc cgtttagcag aaattgctcg tgaagaagcg gaagataacg gcaacgaaga
    16021 ttttgatgat gagcgtttta cttcttctta tgctagagag gctgagcgtg ataatgaccg
    16081 ccgtagtgag ggaaatcgtg gtcgtaacgg caaaggcaat gtggctaaag cgaaaaaagg
    16141 cggacgtgaa gaggataaaa acgaacgcag tgcagatcgt cgcaaccata aagaagtaaa
    16201 aggcaaaggt aaacaaggta agaaaggtgc agctttacaa caagccttta ccaaaccagc
    16261 tcaagttgtt aaagctgatg tggtgattgg tgaaactatc actgtggctg aattggctaa
    16321 taaaatggca gtgaaagcga ctgaaatcat caaaatgatg atgaaaatgg gtgaaatggt
    16381 gacgatcaac caagttatcg accaagaaac cgcacaatta gtggcggaag aacttgggca
    16441 taaagtgatt ttgcgtaaag aaaatgagtt agaagaagcg gttttagaag atcgtgatac
    16501 tcacgcagaa aaagtaaccc gtgcaccggt agtgactatt atgggccacg ttgaccacgg
    16561 taaaacctcg ttacttgact acattcgtaa agccaaagtg gcggcaggtg aagcaggtgg
    16621 tattacccag cacattggtg cataccacgt tgaaaccgat gacggcaaga tgatcacttt
    16681 cttagatacc ccggggcatg cagcctttac ctcaatgcgt gcgcgtggtg cgaaagcaac
    16741 tgacatcgtt gttctcgtcg ttgcggctga tgacggtgta atgccacaaa ctattgaagc
    16801 tatccagcac gccaaagcag cgggtgcgcc attagtggta gcggtgaata aaattgataa
    16861 accggaagcg aaccctgacc gtgtagaaca agagttacta caacacgagg ttatttctga
    16921 gaaattcggt ggcgatgtgc aattcgtgcc ggtatctgcg aaaaaaggta tggggatcga
    16981 tgatttacta gaagccatta ttctgcaatc cgaagtgctt gaattaaccg cagtaaaaga
    17041 cggtatggca agcggcgtgg taatcgaatc ttacttagat aaaggtcgtg gccctgtggc
    17101 aactatcttg gttcaatccg gtacgctaaa caaaggcgac attgttctat gtggttttga
    17161 atacggacgt gtgcgtgcaa tgcgtgatga aaacggtaaa gatgttgaat cagcaggtcc
    17221 gtctattccg gtagaagtat taggcttatc aggcgtgcct gctgccggtg atgaggcaac
    17281 cgtcgtgcgt gatgagaaga aagcccgaga agtggctctt tatcgccaag gtaaattccg
    17341 tgaagtaaaa ctggctcgtc agcaaaaagc taaactggaa aatatgttca gtaatatggc
    17401 agccggtgat gtggcagaat tgaacatcat tgttaaagca gacgtacaag gctcggtaga
    17461 agcgatcagc caatccttaa tggaactttc aaccgatgag gtgaaagtga aaattgttgg
    17521 ttcaggtgta ggtggtatta ccgaaactga tgcaacctta gccgcagctt ctaatgctat
    17581 tatggtcggc tttaacgtgc gtgccgatgc ctctgcccgc cgtgtgattg aaaacgaaaa
    17641 tatcgattta cgttactact ccatcattta tgagctatta aatgacgtga aagcagcaat
    17701 gagcggtatg ttacagcctg aattcaaaca agaaattatc ggcttggcag aagtgcgcga
    17761 tgtgttccgc cacccgaaat ttggggcgat tgccggttgt atggtgacag aaggtatcgt
    17821 taaacgtaac aacccaatcc gtgttctgcg tgataacgta gtaatttttg aaggcgagtt
    17881 agaatctctc cgccgtttca aagatgacgt atctgaggtg cgtaacggta tggaatgtgg
    17941 tatcggcgtt aaaaactaca acgacgtaaa agttggcgac caaatcgaag tgtttgaagt
    18001 ggttgaagta aaacgtacta tttagcctaa ttttgtgtag gggcgtattg catacgccct
    18061 ttgtattttt tagggcgtga agcatcacgc ccctataaaa gagaaaaata tgtccagaga
    18121 atttaaacgt agtgaccgtg tggcacagga gctacaaaaa gaagtggcgg tgattttaca
    18181 acgtgaggta aaagatcctc gcattggtat ggtgactgtt tctgatgtgg aagtatcaag
    18241 agatttggcg tatgccaaaa tttttgtgac tttcttattt gataacgatg ctgaagctat
    18301 taagcaaggt atgcaaggct tggagaaagc aagcccctat attcgaaccc ttttaggtaa
    18361 agcaatgcgt ttgcgtattg tgcctgaact gcgttttatc tacgatgaat cgctagtcga
    18421 aggtatgcgt atgtctaacc ttgtgtctag tgtaatcaaa aatgacgaag aaaaacataa
    18481 agaggactaa ttgtgtctag acctcgcaaa cgtggccgtg atattcacgg cgttttctta
    18541 ttagataaac cacaaggaat gtcttcaaac gatattctgc aaaaggtaaa gcgaattttc
    18601 caagcaaata aagccggaca taccggggcg ttagaccctc tcgcaaccgg aatgctgccg
    18661 atctgtttag gtgaagcgac caaattttcg caatttttgt tggattcgga taaacgttat
    18721 ctcgtcaccg caaaattagg cgagcgaacc gatacttcag atgcggaagg gcaagtggtg
    18781 gaaaccaaag cagttgcagt gacaaaatct caaattttgg ctgctttgga gaaatttaga
    18841 ggtgatattt tgcaagtgcc gacaatgttt tcggccttaa aacacaacgg caaacccttg
    18901 tatgaatatg cccgagcagg gattacggtg gagcgtgagg ctcgcccgat tacgattttt
    18961 gaactaaatt tcattgaata caaggctcca tttttaaccc ttgaggtgca ttgttctaaa
    19021 ggtacttata tccgaacttt ggtcgatgat ttaggcgaag agttgggctg tggtgcacac
    19081 gttacgatgc tacgccgtac agcagtggca gattatccga ttgaaaaaat gatgagctat
    19141 gcagatttgc aaaatttagc cgaaaatcaa ccgcttgcag agttagacca gcacttattg
    19201 ccgatggata cggcagtttc tgcattagca aaaataaatt taagttcaga gcaaactaaa
    19261 gcggtgggtt ttggtcagag aattagattt gataatctga accaacttta tggtttggta
    19321 cgtttatatt cagaagatga acaatttctc ggtgtggcag aaatcaccaa tgatactgtg
    19381 attcgtccta accgaatgat taacttaacg gaataagaat gaaatcgata atttttacct
    19441 tacctttagc gattatcact ttagccttag ccggttgttc aagtgataat caagaaagtt
    19501 atgccggctt aaacttagat gctaaataca gtaaatctcg ctcggtcagt cattttaatg
    19561 attatgtgca ttttctgaaa cagaaggcag caggggcagg agtgtctgca aaaaccttaa
    19621 atgctcagaa attcattcat tacaacgcca gagcggtgca gttagatcaa cagcaagctg
    19681 cacgaagacg tgacccgaat gtaccgcctc cgccaccaaa tccaagtttt aaacaaagta
    19741 ttaactcaag cgaaggtgga tcaggcaagt gaacgttggt atgaatataa tagccagctt
    19801 acccatgcca gccaaaaata tggggtacaa aaagagtata ttttggcact ttggggaatg
    19861 gagagcagct ttgggcgtaa ccaaggggat tttgatgtac tttcggtgtt ggcaaccctc
    19921 gcctttgatg gtcgccgtga gaagttattt acgcaagaat ttgtgaatgc gatgaaaatg
    19981 ctcgatgacg gcacaattaa acgctatgaa ttgcttggat cttgggcagg agcgatggga
    20041 caaactcaat ttatgccaac ttcttactta acctatgcag ctgatggcaa taatgacggt
    20101 aaaaaagata tttgggagaa tgaagccgat gcatttgcct cgattgccaa ttatctttca
    20161 acagtaggtt gggataatca actaccttgg ggtgttgagg ttaaattagc ttcaccgatg
    20221 gatttaagtt tcgccggtct tgaaaccaac aaagcgaaaa cattggcgga atggcaagcc
    20281 ttaggtattt atttagctta tccgaatgga caagaatcgg caaaattagc tcaattacac
    20341 ggcaaagagg tttggttgat tcgtccggat aaagaagcgg gaagagcgtt tttagtttct
    20401 aataatttcc gtactttaat ggattggaat aaatcgaata accttggtat cagtatcgga
    20461 aaatttgccg atcgaatttt agcttcagtt ggtcaataat cgaataaaag catagtagca
    20521 aagcctatct atgcttttat tttatcaaag cgtcgccttt cttctgcaaa cgacgttgct
    20581 taaaaaaatc actgatcttt tggctacatt ctctgcccaa tacattgcca tgcacttcta
    20641 agaaatggtt cattttataa tcttcaaaca gatgatagcg tgaacctacc gcacctgttt
    20701 tataatcact tgccccaaaa accaatcgct taatccgact atgtaaaatt gcaccggcac
    20761 acattgggca aggctcgagc gtaacataaa gggtacaatc taacagacgg taattcccta
    20821 aagtttgtcc tgcttgacga attgcctgca tttcagcgtg tgcagatgga tcacagagtt
    20881 gaatggtttg gttccagcct ctgccgataa tctgttggtt tttatcaacc agtactgccc
    20941 caaccgggat ttcgcctttt gcttcggcta aatcagcgag atcaagggcg tattgcataa
    21001 aggcgatgtc ttgctcggag atctgaagtg gacaagaagt ttgatttggt ttgataaaca
    21061 tagttgcaaa aaattgagtt tttttgaccg cttgtaaaat gccccacgag ggtggggcat
    21121 cgcttacttc gcttagtgtc gtttagtcac gacgaccacg tttttcactg aaacgttttt
    21181 ctttaaagcc acctttgcgg tctttattga aacccccgtc tcggcgacca ccacgatcat
    21241 tacgatcgtt accacggcga ccacgacctt caaatggatt tgcattactt gcactgtttg
    21301 cagagccaag taatgtcatc tgcattggtt tgcttaatac acgtgctttg tgagcgaaat
    21361 gttgtacgag atgatttggc attccttgcg gcaactcaat ggttgagtat ttatcataaa
    21421 gtttgatatg cccgatgtaa cggctgctga tatccccctc gttggcaatc gctccaacaa
    21481 tatgacgaac ttccacaccg tcttcacgcc ccaattcaat gcggtataaa tccattgcca
    21541 caccattgtt ttcacggtgt tcacgaccgt tacgacgatc gtttcgctca ttgcggtcac
    21601 gtccacgttc agaacgggca gcacgcacaa ccggatccgg tggcagaatc agtttttgtt
    21661 tttcttgcag taacatcatc atcgccgctg ctaattcttc gtggtcttga tccgcagtaa
    21721 ataaatcttc caacaattca cgatattttt ctaaatcgtg atgttctaac tgcttagaaa
    21781 tgcgggcttt gaatttctca cggcgttttt ccattaaaat ttcgtggttt ggaatcgcca
    21841 cttcattaat tggttttttg attaaatttt cgatattgcg taataagcgg cgttcacgag
    21901 gctcaacaaa cagtaaggca cgacctgaac gaccggcacg accggtacgt ccgatgcggt
    21961 gaacataaga ttcttcttct aacggaatat cgtagttaat aaccaagctg attcgctcaa
    22021 tatcaatacc acgggcagca acatcggtgg cgactaaaat atctaaacga ccggagcgta
    22081 atttatctaa ggtttgctca cgggcttgct gggtcatatc gccgtttaat gccgcagtac
    22141 ggtagccgtt gcgttcacac aattcggtaa tatcaatagt accggttttg gtgcgggtaa
    22201 agatgatagc agcatcaaat tcttctactt ctaggaaacg caataacgca tcgtttttac
    22261 ggaagccgtt taccagccag tagctttgtt caatatccgg ggctgaacgc tcggttgcct
    22321 taatttttac ctcttgcgga tctttcataa aacgacgggt aatacggcga atcggctccg
    22381 gcatggtggc agagaagaga gcagtttgat gtgtttccgg taattcagcc attaccgttt
    22441 caacatcgtc aataaagccc atacgcagca tttcatcggc ttcatctaac acgatgaatt
    22501 ttaattcgga taaatctaat gtgccacggc ggatatggtc aagaatacgc ccaggtgtac
    22561 ccactactac ttgtgagcct tgttttaaag cacgtaattg aatgtcgtaa cgttgtccac
    22621 cataaaccgt cactacacga atgcctttca tattttttgc aaactgctca caagcatcgg
    22681 ctacttgaat cgcaagctca cgggtgggtg ccatcaccaa catttgcggg tggcgttgtg
    22741 ttgggtcaat ttgtgccaac agcggcagcg agaatgcggc ggttttaccg ctcccggttt
    22801 gtgccatacc aagcacatca cgaccggcta ataaatgagg aatacattct tgttgaatgg
    22861 gtgatgggtt tacaaagccc atttcattta cagcatcaag gattggttga ggtaagccta
    22921 aatcggcgaa agttaaagat tcagttgtca taaaaaacca tttgtttgga acgcacaaag
    22981 cagaaaatat cgactatttt tctgcacagc cattaatgaa aattatattg ttgaaattta
    23041 ggaagaaatg aaataacaaa gcaagtgatg ctttaaaaat cccctgagta taagcggtta
    23101 aatttacaaa attttttgcg aaattaaccg cttgtattgt cctaatcttt ccctattctt
    23161 tatcaacaac gggagtcgtt tgagtcatac cacgaatttg tgataactca aacagggcaa
    23221 aacgatactc aacgaagtta aacacttgat ttgcaagagc aagacgaaag aggctgattg
    23281 cctcatcttt atgatctaat ttgagttgtt gttttgctaa gtagaaatac gtttctgtca
    23341 gtatttctgc atattgtgag ctattttcct tagcgtcacg ttccattata gcacgaactt
    23401 gagctaaatt gagcttccct aaaaaataat ttacgatatt tgttccccag taatccgaag
    23461 aaagattatt agctcgcttt tgtaaattat ttttagcttc tgttggtgta aattccagct
    23521 cattaaaata gagccataat gctcgataag gatctttctt atcttcttca taaaaatgga
    23581 gaagatcacg ctgggcttca gaatatctgc cgctataata gaaagccaaa cctcgattga
    23641 gataggtgta gctatattcc cgatctaatt ccaatacggc attaaacgca tcaatcgaac
    23701 tgtcgtaatc gccttccagc agcagataca gccccatata gttataagct gccgccatac
    23761 gttgattgag cgaaatggct tgagcaaaat cataacgggc taacgaccat aaacctaaac
    23821 tgtcgtaaat aacgcctctt tcaaaataga ggtctgcttg ctcagagggc gttaatgggg
    23881 cttcttccaa tacttggctg agtcttacca ccattgcctc ttgttcaaag cgaagttgag
    23941 gattaagttc tgccaatgct aagtttttaa ttgaaaccaa atcggcatac cgactggtac
    24001 agccgcttag cattaaaaca gaaattaaat tcagtaataa gaaacggatt cgaaacaact
    24061 taaaaagttg taccattaca gcatatccct caattaagga aaattaaaaa ctgaataacg
    24121 gacactcaaa gtccgttatt cgcctttatt attgaactag aaattatttt cttgttctgt
    24181 ttctaccaca ttttcagcta cagtttcttc tgcatttgcc tcgttggtat tattgatgtc
    24241 tttcatcgtc agacgaatgc gtccttgacg gtcaatttct accactttca cttgtacttc
    24301 ttgaccaacg gttaagtagt ccgctacacg ctcaacacgt tcgttggtga tttgtgaaat
    24361 gtggactaaa ccttctttgc cacctaagat ggaaacgaat gcaccgaagt ccaccacacg
    24421 ggttacttta ccgttgtaga tttggtttac ttccacttcg gcaacgatct cttcaatacg
    24481 agccattact gctttcgctg cattgccgtc agttgccgca attttcaccg taccgtcatc
    24541 atcaatgtcg atagaagtat tggtctcttc ggttaaagca cgaattgttg caccgccttt
    24601 accaatcaca tctttgattt tcttcggatc gatcttcatt gtgtgaatgc gtggggcata
    24661 gtcagaaata tctgcacgag gtgccggaat ggcttgttcc attacaccta aaatgtgcat
    24721 tcttgcacct ttagcttggt ttaaggcaat acgcataatt tcaggggtga tcccttcgat
    24781 tttgatgtcc atttgcagcg cagtcacacc ggtacgggtt cccgctactt taaagtccat
    24841 atcgcctaag tggtcttcat cacctaagat gtcagaaagt accacgaatt tctcgtcttc
    24901 tttcacgagc cccattgcga taccggcaac cgctgctttg attggcacac ctgcgtccat
    24961 caacgcaaga gacgcaccac acacagatgc cattgaagaa gaaccgttag attcagtgat
    25021 ttcagacacc acacgcacta catacgggaa ctcttcagcg gttggcatca cggctaatac
    25081 gccacgtttt gctaaacgac cgtgaccgat ttcacggcgt tttggcgagc cgatacgacc
    25141 ggtttcgccc acagagtatg gagggaaatt gtagtggaat aagaaacggt cagatttttc
    25201 gccggtcaat tcgtcaatga tttgggcatc acgctctgtg cccaatgttg ctactgctaa
    25261 tgcttgggtt tcgccacggg tgaaaagagc agaaccgtgg gtgcgtggta acacactggt
    25321 gcaaatatcc aatgcacgca cggtatccac cgtacggccg tcaatgcgtg gttcgcctgc
    25381 aataatacgg ctacgcacga tttggctctc taatgcggtg atgatgtcga tgatagtccc
    25441 ttcagaaaca gtttcatctt ctgcggtaag ttgtgcaatc acctctgctt taatcgcatc
    25501 gatttgctcg taacgaactt gtttttctac gatacgataa gcatcgccaa ggcgtgtttc
    25561 tgctaatgct tttactttgt tgattaaatc tgtatttggc tctggtgcaa cccaatccca
    25621 acgtggtttg cccgcttctt taacaaattc tttgatgttt tcgattacaa cctgttgttg
    25681 ctcgtggccg aacaccaccg ccgctaacat ttgctcttcg gttaagatat ccgcttcaga
    25741 ttccaccatc aacacggctt tgtctgtacc tgaaaccact aaatctaagc ggctgatttt
    25801 ttgctcgctg gtggttgggt ttaatacgaa ttgatcgttg ataaaaccga cacgagccgc
    25861 accgattgga ccgttaaacg gcacgccgga taatgaaagg gcagccgatg caccgatcat
    25921 cgcaaccaga tcaggactga tttgtgggtt taccgatact acggtcgcaa tcacttgaat
    25981 ttcgttaaag aaaccttctg ggaaaagtgg acgcacagga cggtcgatca agcgagcgat
    26041 taaggtttca ccttcgctag gacgtccttc acgtttgaag aaaccgcccg gaatacgacc
    26101 ggctgcgtaa gtacgctctt gataatctac ggttaatggg aagaaatctt gcccttcttt
    26161 tacgtctttt ttcgctacta cggtaacaaa tacggttgtg tcgtccatac ttgccattac
    26221 tgctgccgtt gcttggcgtg cgatagcacc ggtttctaag gtcacggtgt gctgaccgta
    26281 tttaaactgt tttacaattg gagtcattga aattttcctt ttaaagaatt tactattatt
    26341 gtcgttttat ttctctaaat tgcgactagc aaaaaggctt ttaagtaaaa catttttgat
    26401 agccgcctct caataacaag aaataaaact tgtctagtat agcgtgattt ttataaaaaa
    26461 tcgcctatta ttttgatctt gcacctcagt tataaagaaa ttcaaaactt cagtgtaaaa
    26521 tggggattag tttgtgaaaa gccttgtgaa aatagtttga ttgcatcgct atttttttat
    26581 tagaggtagt ttaaaactaa atctgcttcc tttaccggct tcactttcaa tttccagtgt
    26641 ggaatggtgc tgttcaagag cgtgtttgac aatagccaga cctaaaccgc taccgccggt
    26701 tttgttgcta cgagattcgt ccacacgata gaaacgttct gtcagatggg taatatgatg
    26761 ggcatcgata ccaataccgt catcttgcac gctgaaaatc gcagtattcg gctcttgatt
    26821 atcacgttga caacatattt gaatggtaac tccttcaccg gcgtgccgta ttgcattgta
    26881 aattaaattt gatacagcgc tttggagttg ctcttgatct ccccataccg ttaaattagg
    26941 ctcaatatca aacagtattt gctgattttg gcttaaaatc tcggtatttt tttgtatggc
    27001 ggagattaac gccgacatct ggacctcatt gtgttcggaa tcattggaat gctcgatttt
    27061 aaccaaaagt gagagttggc gaagcaggtt agtcatacgt tgactttgct ctttcatcgc
    27121 attgagcgct ttttgctgta atgccatatt atgcggctcg ttttccagca tttccaaata
    27181 accttgtaat atggtaagag gtgttcgcag ttcgtggttc atatttgcca aaaaggtttg
    27241 tcgtgagtgc ataaggcgga caaaagaggt tacatctcgt gcgacaataa gtctggagtt
    27301 actgtcatat cgattgagat tcaattcaat atagcgttta ttatgagtca gcagtaccaa
    27361 tgggcgatgg tgtcgttgtt ggcggaaata gcttttaaat tcaggataaa aaatcacatt
    27421 aaaaatgctt ttatttgatt ttttgtccca ataaaactca aatagctctt gtgcaacatt
    27481 attgcaccaa gaaatctccc cgttttcttg gcaaataatg atcgcatcgg gtaagtattg
    27541 aatatgctta tttaattttg ataacagacg taaggttttg attttatctt ggcgtaaacg
    27601 ttcgtgatag aatgcggcac tttgagataa atgctccatt gtcgttactt ttgacctgcc
    27661 gctttgctca ttaggtctga gtaactgaag gagagaagat tcggtgtggt gatgccaaat
    27721 aagtagaacc agtaaacaaa aactaaacca gaaaaaataa gcagggaaaa acagattgaa
    27781 tacgccggca acggctgctg ccagcaaaag ttccaataaa aagtgtttaa gtgagagctt
    27841 aactttcatt attagtcctg aaaatggttg gaaaaacggt atcccgagcc acgtacggtt
    27901 tgaatataac gctcaaaacc atagggttca agactcttac gcaatcgccg aatataagag
    27961 tctaccgtgc gatcctcaac ataaatatca ttaccccaaa taaaatcaag caactgttca
    28021 cgacgataca ctttttcagg gtgagtcatt aaaaagtgaa gcagtttata ttccgtgccg
    28081 cttaatttca cttcctgttc ggcaaccaaa acccgttgtg cctgttgatc aagaatcaat
    28141 ccgtctatat tgatgagatt gcttggcgga tcatagcttc gccgccatac tgcttcaatc
    28201 cgggcaagca acacctgtgg tgaaaacggt ttggtaatgt agtcgtctgc accggcattc
    28261 agaccggtaa tacagtcttc ttcgctactg cgggctgtta gcataatgat tggaattttt
    28321 tcggtttcag gctgtttttt taggtattta attaaatgga tacccgaacg ccccggcatc
    28381 atccaatcca gtaaaataag ctcgggtttt tcgcccagtt tattgatagc actttggtag
    28441 tcttccgctt caattacctg atattgtttg ctgagataga gacttagcat ttcacgaata
    28501 gcacgttcgt cttcaacgat cagaattttg ttattcattc ttcctctccg atgcggtgtg
    28561 acaagcggtc gatttatcgc agaaatttgc aaatttttta ctaaaaccga ccgcttgcag
    28621 attaccccat tttaccttta atgtaatctt ccgtctgccg gaattttggt ttgtcgaaaa
    28681 tttgtttggt atcaccgaat tcaatcagct cgcctagata catataagcg gtatagtcag
    28741 aacagcgggc tgcttgctgc atattgtggg taactatcgc taccgtgtag tcgtgcttga
    28801 gttcgttgat aagttcttcg attttcatag tcgaaatcgg gtcaagtgcg gagcagggct
    28861 catccagcag taacacctcg ggtttcactg caatacctcg tgcaatacag agccgttgct
    28921 gttgcccgcc ggagagactg tcaccatttt ggtttaattt atgctttacc tcattccata
    28981 aagccgcttt ggttaatgcc cactctacac gatcgtttag ctcggatttc ggcaattttt
    29041 caaacagacg aataccaaaa gcaacattat cgtaaatgga catcgggaat ggggtcggtt
    29101 tttggaaaac cataccgact ttggctcgaa taatcgaaat atccgtatcg gaggtgagta
    29161 gattctctcc atcaagattg atttcccccg ttgcacgttg attcgggtag agctcaaaca
    29221 ttcggtttag ggttcgcagt aatgttgatt ttccacaacc ggaaggaccg ataaatgcgg
    29281 tcactttatt tttggcaata cgcatattga tatttttcag agcgtggaaa tcgccataat
    29341 aaaaattgag gttgttaata tgtaattttg tctctaaatc cgttggtaac atatagagtc
    29401 cttattttgt tttgctgaaa tacagacgag tgatgatatt aagagaaagc acaaacagag
    29461 taataagcat tgcacctgcc caagccaatg tattccagtc agcgaacggg ctggctgcgt
    29521 attgataaat caccacaggg aggtttgcca ttggtgcatt catatctaaa gaggcaaact
    29581 ggttggataa tgcggtaaac aatagcggtg cggtttctcc ggaaatacgg gcaacagcga
    29641 gcaacacgcc ggtaataatg ccggagcggg cggcacgata agagatcatt gtaattaccc
    29701 tccatcgtgg gcagccgaga gccgcagctg cttcacgcag attattaggc acaagattga
    29761 gcatactgtc ggtagttcga acaacaatcg gaatcactaa taccgccaat gctaatgagc
    29821 ctgcccagcc tgaatagtgt ttaacctgtg cgacataaat cgcataaata aataagccga
    29881 taataataga aggagcagag agcaacacat cattcaaaaa acgggtgaat tttgccaatt
    29941 tggtataacg cccgtattcg ctcaagtaag tgccggctaa aataccgatt ggtgttgcaa
    30001 tcagtgttgc ggtactgaca atcagtatag agccgacaat tgcattacgt aatcctcctg
    30061 tttcatttgg tgcaggagtc gggcgggtaa acagttccca agacagtgca gggatacctt
    30121 tttggagtaa agtaacaata atccagacca gccaaaataa gccaaataat acagcggaat
    30181 aggcaagact taacatcaag acatttttta tttttcggca ataaaagcgt cggttttggt
    30241 aatttttcat tctcgttttc cttcctgttt acccattcgt gcgattaata aacgtgaagc
    30301 ggctaaaaca atcgaagtaa taaggaacag aattagccct aggctcatca acgctgattt
    30361 ttgtaatccg ccggcttcat taaattcatt ggcgatagca gaagcgatgg aggttgaagg
    30421 ggaaaatacc gaatcaggta gcataaaggc attaccgatc acaaaggtaa ctgccattgt
    30481 ttcgcctaat gctcgaccta acccgagcat aattgcaccg attactccgg ttttggtgta
    30541 aggtagcacg actttccaaa taacttccca agtggttgag cctaaaccgt aagcagactc
    30601 tttcagtaaa ggcggtacaa cactgaaaac atcacgcata attgaggcaa taaagggaat
    30661 aatcataatc gccaatacca agccggcact gaatagcccg atcccgaaag gagctccgct
    30721 aaaaagcata ccgataaagg gaagctgacc aaatgtatct atcaaatacg gttgcacata
    30781 ttcttgaaat aagggtacaa atacaaacag cccccacata ccgtaaataa tagagggaat
    30841 agccgctagc atttctaccg ctgtgccgac agggcgtttt agccattgcg gtgcaagttc
    30901 ggttaagaaa gtcgcaatgc cgaacgagac cggaacggca atgactaatg caatgccggc
    30961 agaaatcaat gtgccgataa tcggcactaa tgcaccgtat cggtcattca cagggttcca
    31021 ctcgttttcc cataggaatg ataccccgaa tcggcttaat gcttcccaac tgccaagcaa
    31081 taatgaaacc agcaccacca ccaacaaggc aaaaaccagc aaagcaaaga aacgggttgt
    31141 gtgatgaaat aacccctcta cccaaggatg gtttaagcat ttgttatcaa ttttatgttt
    31201 atgcatagtg acaactcttt tgcaaaatgt tgtgaaaaaa cgaccgcttg ttgttagtta
    31261 agctccatac aagcggtcgt tttgcattag tagagcgaat ttccttgtcc atctttaact
    31321 tccgttttcc attgagtttg gattttctct actacattat ccggtagagg cacataatcc
    31381 agttcggcag ccgcatcttt accgtgctta aatgcccagt cgaagaattt aaatacccct
    31441 ttagtttgct ctggtttgtc gctatgttga tgaatcaaga taaaactggc ggcggtaatc
    31501 ggccaggctt tttctcccgc ttcgttggtt aaaataacgc ccataccggc tgtttggctc
    31561 caatcggcgt tagcagcggc agcagcaaac gtttcacggg aaggctgaac aaatttacca
    31621 tctgcatttt gcatagaaac ccaagccaga gcattttgtt tagcataggc atattctacg
    31681 taaccaatag aatacttgag ctgtttcaca taagctgcga caccttcatt tccttttccg
    31741 ccttgtccga ccggccattt caccgatttt ccttcgccga ctttctcctt ccattcggca
    31801 gagactttag aaagatagtt tgtccaaccg aaagttgtgc ctgaaccgtc tgagcggcgt
    31861 acgactaaaa ttgtttttgc cggcagggcg atatcttgat taagtgcgac aattgccgga
    31921 tcgttccatt gtgtaatttt gcctaggaat atatcggcaa gaactttacc ggacagtttc
    31981 agttcgcccg atttaagttc aggaatattg acaaccggta cagttccccc aatgatggcg
    32041 ggaaattgca aaagtttgtg ttctgctaat gtttcgcctt tcatcgggtc atcagaagca
    32101 ccgaaatcaa ttgttttggc aataatttgt tgctgaccgc caccggaacc gatagattgg
    32161 taattgattt tattaccggt ctctttttca tataaacctg cccatttggc gtagatagga
    32221 taagggaaag aagcaccggc tcctgtgatg gtttgagcat ttgctgcgac agaaagtgaa
    32281 aaagaaatgc ctaaaacggt aagtagttta aatcgtttgg caatcatatt gttctcctta
    32341 aagttagcgt gagttaattt cacgtgctta gtgtagaaaa agaatatgac aaaatgatga
    32401 caatggtaaa aaaatcagaa aaaacgaccg cttgtgtttc aggctagact aaacaggcta
    32461 aatcgtagaa aatagccctc gtttttttaa tataaatatc gataaaaaat gaccacagaa
    32521 atcaattatg aaggcattga acagatgccg attaagcgtt ttaccgaaga tgcttacctc
    32581 aattattcga tgtatgtaat tatggaccgg gcattgccgt ttattggcga tggcttgaaa
    32641 ccggtgcaac gccgtattat ttatgcgatg tcggaacttg ggctaaacgc ctcggcaaag
    32701 tataaaaaat cagcccgtac cgtgggggat gtattaggta aattccatcc gcacggtgat
    32761 agtgcctgct atgaagcaat ggtgctaatg gctcaaccgt tctcttaccg ctatccgtta
    32821 gtggacggac aaggcaactg gggggctccg gacgatccga aatccttcgc tgcaatgcgt
    32881 tataccgaat cgaaactgtc taaaattgca gaaattttat tgggcgagtt agggcaagga
    32941 acggtggatt atcagccaaa ttttgatggc tcgttggaag aaccgaaata tctgccggct
    33001 cgtttaccgc atattttgtt gaatggcacg atggggattg cggtgggaat ggcaaccgat
    33061 attccaccac acaatattaa tgaattggct gatgccagtg tgatgttgct ggataacccg
    33121 aaagcaacgc ttgatgatgt actaagcgtg gtacaagggc cggattaccc gacagaggct
    33181 gaaatcatca caccaaaagc ggaaattgcc agaatgtatg agcaggggcg tggttctatt
    33241 aaaatgcgtg cggtgtggaa aaaagaagag ggtgaaattg tgatttcagc cttgccgcac
    33301 caagcctctc cttcaaaaat tattgagcaa gtagcaaccc aaatgcggaa taaaaaacta
    33361 ccgatggtgg acgatattcg tgatgaatct gaccacgaga acccgattcg cattgtgatt
    33421 gtgccacgct ctaatcgcat tgattttgat gcgttaatgg atcacctgtt tgcgacgacc
    33481 gatttggaga aaagctaccg agtcaatatg aatatgattg gcttagacgg caagccggca
    33541 gtgaagaatt tgctgactat tctcaatgag tggctgagtt ttagacgtac cactgtcact
    33601 cgccgcctga attaccgatt agataaaatt ttaaaccgct tgcatatttt agacggtttg
    33661 atgattgcat ttctcaatat tgatgaagtg attgagatta ttcgcaatga agatgagccg
    33721 aaagccgagt taatggctcg ttttaatctg accgatgtgc aagcagaggc gatcctgaac
    33781 ttacgtttac gccacttagc caaattggaa gagcatcaat tacaggcgga aaaatccgaa
    33841 ctggaaaaag aacgtgatga attgcaactg attttaggct cggaacgccg tttgaacagc
    33901 ctgatcaaga aagagattca agccgatgcc aaagcatttg ccagcccacg ccgctcacca
    33961 ttggttgaac gagcggagtc taaagcgatt gcggaaagtg acttgactcc aaccgaagat
    34021 gtgactgtga ttttgtctga aaaaggctgg gtacgttgtg cgaaaggaca cgatattgat
    34081 gttcaagccc taagccatcg agccggagat ggttatcttg cccacgcaag gggtagaagt
    34141 aatcagcctg tggtattttt agacagtaca gggcgagctt atgctctcga tccaacttca
    34201 ctgccttcgg cacgctcgca aggcgaaccg cttacaggca aaatcaccct accggaaggt
    34261 gcagtagtgc agcaagtgct aatggcaagt ccagaaacta aagtgctaat ggcatccgat
    34321 tcaggttacg gctttatttg cacctttgca gatttagttt ctcgtaataa agccggcaaa
    34381 gcggttattt ctttaaccga aaatgcaaaa gtactgccgc cgcaattatt ggaaaatgat
    34441 gaaaatttat cgcttgtagc gatgagtaat gttggcagaa tgttggtttt cccggtgagt
    34501 gaattacctc aactttccaa aggtaaaggc aataaaatca tcaatatttc cgccgcagcg
    34561 gcaaaatccg gtgatgaata tttagcccgt ttattagtca tcaaaccaac caactcgctg
    34621 gtctttgtgt ccggtaaacg caaaatcaca ttaaaaccga gcgatgttga taactaccgt
    34681 ggcgaacgag caagaaaagg ctcacagcta gtgagagggc ttagtaccaa ttcaacggta
    34741 gagattgttg agtaaagaga agaagcggtt agggggtaaa tccaacaatt ttgccccaaa
    34801 taaccgcttg caatggagtt attgcttatt caaataagcc tttgtgaagc gaacgaacca
    34861 catcgtctgc ttctgcattt ttcactaagg tacaaacatt attgctgctt gctccatagc
    34921 tgattaggcg aatgttgtaa ttctcaagag tgtggaataa ttttttcgcc acaccggact
    34981 gagcgtgtaa gttgttgccg ataatagcga ctaaagcgag gtcgctttct acttgcacat
    35041 tgcaatatgc gttaagctca tcgagtaatt ccgctgataa catatctgca cctgaagagg
    35101 ctgagcccgt tttatctagg gtcaatgcaa cgctgacttc ggaagtggta atcacatcaa
    35161 ccgaaatttt gtgtttcgct aaaatcgcaa atacattcgc taagaaacct tgtgcgtgta
    35221 gcattgaaag gctggaaagc gtgagtaaaa tttggttgcg gcgtaatgca atcgcacgga
    35281 aagtcgggcg tggttgtgga tcacgggtta cccaagtgcc gccttgttcc ggtgctttgc
    35341 ttgagccaac atatacaggg atattgctac gcactgccgg taataaggtt gctgggtgta
    35401 atactttcgc tccaaatgtt gccatttctg ccgcttcgtt aaatgccatt gtgtcaatgc
    35461 gttgagcgtt cggtacaaca cgaggatcgg tggtataaat ccccggtacg tctgtccaaa
    35521 tgagtacatc gttagcattt aatacttctg ctaacaatgc agcagagtag tctgaaccgc
    35581 cacgtcctaa agtagtggtt ttgccttcat catcacgacc aataaagccc tgtgtaatca
    35641 caattttgcc tgatgcgatt aatggcttaa tcacattgtc tgattgttgc tgggttttct
    35701 cgtcatttgg tgctgctttt ccataatggc tgtttgttgc cacaacgtca cgcacatcta
    35761 cccatactgc cgggtgtcca cgttcaatta ataattgcgt gaagattttg gtggacatca
    35821 tttccccatg gctgattaac tcatcactta aggcagctga agtagcaagg ctggctgatt
    35881 ctgctaatgt ttcaatacgt tctaataatt cgtcgatttc cgctttaacg gcatcttgat
    35941 gttgtaattt ttcaataata ttgtattgaa tttggcggac tgctgcgatg acttcatcac
    36001 ggtgttcttt ttcacagccg ttagcaagtt ccactaagta attggttacg ccagcagagg
    36061 cagaaagtac caccacacga gtatttgcat cagcaattac aatattggca gaagaggtca
    36121 ttgcatcaaa atttgcaaca cttgtaccac caaatttagc cacagaaaga tgagacataa
    36181 taaaaatttc cttaaaacaa aaatagataa atattgtgtt aggggatatt cggaaaggaa
    36241 atttgagtag attatacggt tttattgttg aaccaattaa tcagagcact ccatttaata
    36301 tggtgaaata acctattaaa tgacagctga taggattcaa cctattcagc cgatgttaat
    36361 tccagtctag tgaattcaca cctcggcaat cactcccatc acttaattct caaacggccc
    36421 tagttgccta aaatcaagtt gcctgagtgt tgcacctctc ccgtaatggc aagcccatta
    36481 ctctttttca acagtattga aaagtgtgca tagaaatacc gttttattaa tgttttgtca
    36541 atgaatattt aggtaatcca atgctattta ggtaattatt taaaatatag cgataaaaag
    36601 taaacatatt tctaatgttg aataaaaact cctaaaaaat attttgaaat ggatcacaaa
    36661 accaaattta tttgattgtt ctttaatcgg tttttttcta tgcttaagtt actcattatg
    36721 aggtattttt ggaggctttt atgagtacat taacctattt acaaaaaatt gggcgtgcat
    36781 taatggtgcc ggttgctgca ttaccagcag cagcattatt gatgggtata ggctattgga
    36841 ttgatccgga cggctgggga acaaatagcc aattagcggc attgctgatt aaatctgggg
    36901 cggcaattat tgataatatg tctattctat ttgccgtggg tgtggcattt ggtatgtcaa
    36961 aagaaaaaga tggggcagca gcattatccg gtttagtcgg gtatttagta attaccactt
    37021 tgttgtctcc ggggaccgtt gctcagctaa aagggatcgc agttgatcaa gtgcctgcag
    37081 cattcggtaa aatcaacaac caatttatcg ggatcttagt aggggttatt tcagccgaaa
    37141 tttataaccg tttctaccaa gtagagttac cgaaagcatt gtctttcttt agcggtaaac
    37201 gattggtgcc gattgtggtg tcatttatct tgctttatgt ctggccggtt atttttggtg
    37261 ctttagtctc ttttggggaa tctatcaaag atatgggggc gttaggggca ggtatttatg
    37321 ctttctttaa tcgtttatta attccggttg gattacacca cgcattaaac tcggttttct
    37381 ggtttgatgt tgcaggcatt aatgatattc caaacttctt aggtggggca aaatcattgg
    37441 ctgagggcaa agcagtgata ggagtaacag gtatgtatca agctggtttc ttcccgatga
    37501 tgatgtttgg cttacctgcg gcagcattag ctatttacca cagtgcgaaa ccggctaaga
    37561 aaatgcaagt agcctctatt atgtttgctg ctgctttagc ttcgttcttc accggcatta
    37621 cggaaccgct tgaatttgcc tttatgtttg ttgcacctgt gctttatgtg gttcacgcat
    37681 tattaaccgg attatctgtt tatattgcag cctcaatgga atggattgcc ggtttcggtt
    37741 ttagtgcagg gttggtcgat ttagtgttat cgacacgaaa tccgctggca gtgcagtggt
    37801 atatgttatt ggcccaaggt atcgtattcg cagtaattta ctatgtattg ttccgagtag
    37861 tgatccaagc ctttaattta aaaacgccgg ggcgtgagga agatagcgaa gtacaaacag
    37921 tgaatactgt ttctcgtagc gaacaagctg ccaaatttgt tgaagcatta ggtggtaaag
    37981 agaatattac cagcattgat gcttgtatta cccgcttacg cctaacctta aatgatacgg
    38041 cgaaagcaga cgaaaccaaa ttgaaagcgt tagggtcaaa aggtaatatc aaattaggcg
    38101 agaatggcta ccaagtgatt ttgggaccgg aagcagaatt tgtggcagat gcaatgaaaa
    38161 agctgaatta atctctgctt aatcacaagc ggtctgattt gcatattttt ttgcaaatca
    38221 gaccgcttgg ctttttatgc ttttttattg gttggtgctt gtttgtgaga ggccattttt
    38281 tggcggattt cacggcgttg tttggaaagt tccgcattac ggatcatata atcatctact
    38341 cgattttcat agtcatcacg catattggaa ataatcgctc gaacttcctc gatagacatt
    38401 tcgtcggtaa tatattgcgt taggttatct aataaaagta cacgcttctg attatctcga
    38461 attttgcgat cattatccgc cgtttcacgg tgcagtttgt tttttagacg ataaagatgc
    38521 acatattcca gcatatcgtg gaatgattta ttcacttcag acatatcaat ctcccttgat
    38581 gtagtgttga attaagtaag ctcgtaaatc ctattctttt tccgtcaatt cgtcaaaaaa
    38641 atttatcaca ttttatgatt taaattaatt ctcgcgaata acgctaaatt tgtagtgata
    38701 tctagggctc aaaaatggta atatcttact tatttcagtt attggtacag ggtttcatta
    38761 tgtcatcaaa tattgctcct agagagtttg cagctattga tttaggctcg aacagctttc
    38821 atatgattgt agcccgtatc gtaaatggtt ccattcaagt gctttcccgt ttgaaacggc
    38881 gtgtacggct ggcagatggg cttgatgaaa acttagtatt aagccaagat gcgattgata
    38941 gaggcattgc ttgtttagct ttatttgcaa aacgtttaga agggttctct gcagagaatg
    39001 tgaaggtggt tggcacttat accttacgta gagcaatcaa taaccaagct tttctggagc
    39061 aagcgaaagc agtatttcct tacccgattt ccattatttc cggacaacaa gaggcgaggc
    39121 tgatttattc gggcgttagc catacccaac ccgaaactgg cagaaaatta gtggtagata
    39181 ttggcggtgg ttcaacggaa atgactattg gtgatgactt taccccgatt cgagcggaaa
    39241 gtcgtcatat gggttgtgtg agttttgcaa aacgcttttt cccgcagggg gaattaacga
    39301 ttgagcgttt tgatagtgcc tatcagcttg caatggaaaa aatcgaagat ttaatgtggg
    39361 agtacaaaga gttaggttgg gactatgctt taggttcttc cggtacgatt aaaaccgtcc
    39421 atcaagtgct gattgccaat ggctatcgtg atggcttaat tacagaaagc cgcctacaga
    39481 aaattattga tatttgccta gagtttaaat cgttaaatga gattaagcta cgaggcttac
    39541 ttgatgaacg agcagatgtg ctagttccgg gcttagctat tcttttagca ctttttcaca
    39601 cttttagaat tgatgtatta cgttattcca acggggcttt aagagaaggg gtaatgtatg
    39661 gtttggagaa aagtttccaa gttggggata ttcgccaacg gactgcagaa gcgttagctg
    39721 agcaatttgc tttagataaa cagcaagcaa aaagggtgga gcatacggcg ttgattttat
    39781 ttgaccaaat caaaacttgg aagaaccgcc gccaagtgca agatctgcgt tcaatgctga
    39841 aatgggcaag tttattacac gagattggta ttgttgtaaa ccacaataat gtgcatcgtc
    39901 attctgctta tttgattgca aaccgagatt taccgggatt tgattttgaa cagcaaaccc
    39961 ttctatcggt attaatgcga taccacctta aaggattcaa acgctcggat attcgtagta
    40021 tcaaccgtta ccaatgtaga gatgtattaa cgttggtacg ggttttccgg ctagcggtgc
    40081 tattaaaccg ttctcgccaa gcgactgtag tgccgaaaca gttgaatttg gtgattgaaa
    40141 ataatgcttg gcaacttacc tttgaacagg gcttcttagc gaataatcca ctgatttcaa
    40201 tagatttaga agaagagcaa aaaatattgg cgagtacaaa tcttcagttt gcggtctctt
    40261 aacatttaaa tgaaggaagc gaaggcttcc tttttcgttt attgcattcc cttttgcgaa
    40321 caagcggtca aatttagcta attttttgca aaaagtattt tttaaaattt gatcaacttc
    40381 tcatttttga tgttt
//
LOCUS       DANLZQ010000013        39571 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.013, whole genome shotgun sequence.
ACCESSION   DANLZQ010000013 DANLZQ010000000
VERSION     DANLZQ010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 39571)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39571)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39571
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.013"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(101..1384)
                     /locus_tag="PXE50_000601"
     CDS             complement(101..1384)
                     /locus_tag="PXE50_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5621536.1"
                     /translation="MTACHEPKRSIWQQIFTKNMLLCVYTGFCSGLPLFVLIQLMPAW
                     LTSANLDIKTIAAFTLTSLPYTWKFLWAALLDRYFPPFLGRRKSWIFISQIGLLVILA
                     SFGLFNPVQDISIIVTLSVLLAFLSATQDIVVDAFRREILSDNELGLGNSIHVNAYRI
                     AGLIPGGLSLFLADHYAWDTVFLITAAFLVPCLFVTLIIAAEPNHKPIDRSKPFYMAF
                     VDPFKEFFTRKGVAGAIGLILFIFLYKLGDSLATTLQTKFILDMGFTKSHIAGIVKIT
                     SLWCSIGGGIIGGVAMLKLGVNRALWLFGFVQLITILGFAYLASFEHFPTESIGAAEL
                     WKLGLVMAGEYLGVGLGTAAFVAFMARETNPAYTAMQLAIFTSLAALPSKMLGAYTGH
                     LVEMMGYYQFFWLCFFIGIPGMLMLFKVAPWGQAE"
     gene            1550..5266
                     /gene="metH"
                     /locus_tag="PXE50_000602"
     CDS             1550..5266
                     /gene="metH"
                     /locus_tag="PXE50_000602"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HDL5621537.1"
                     /translation="MNTQHRTELLQNALTERILILDGAMGTMIQKYKLTESDFRGERF
                     KNSTIDLKGNNDLLTLTQPLLISAIHEKYLAAGADIIETNTFSATTIAQADYELESIA
                     YELNLVGAKLARLAADKFSIPEKPRFVAGILGPTNRTCSISPDVNDPGFRNITFMQLV
                     EAYAEATRGLIEGGADLIMIETIFDTLNAKAAVFAIETVFDELGVKLPIMISGTITDA
                     SGRTLSGQTTEAFYNSLRHAKPLTFGLNCALGPKELRPYVEMMSKISETFVSVHPNAG
                     LPNAFGGYDLGAEEMATYIKEWAELGWLNIVGGCCGTTPEHIQAFAEATKGVAPRKLP
                     EIPTAMRLSGLEPLTIDDNSLFVNVGERNNVTGSAKFKKLIKEEKFAEAIEIAISQVE
                     NGAQVIDVNMDEALLDSKKCMTRFLNILATEPEAAKVPIMIDSSKWEVIEAGLQTVQG
                     KPIVNSISLKEGEEKFIHQAKLCRRYGAAVVVMAFDEVGQADTEERKVEICTRAYRIL
                     VDQLGFPPEDIIFDPNIFAIATGIEEHNNYGVDFIQACERIKRDLPHAKISGGVSNVS
                     FSFRGNNVVREAIHAVFLYYAIKAGMDMGIVNAGQLAIYDDLDPELREAIEDAVLNHR
                     HDTTDRLLEISEKYRGVKVESADESAAEWRNLPVAERLKHALVKGITTYIIEDTEEAR
                     QQFASPLEVIEGPLMAGMDVVGDLFGDGKMFLPQVVKSARVMKQSVAYLEPYINATKQ
                     KGSSNGKMVIATVKGDVHDIGKNIVSVVLQCNNFEVIDLGVMVPADVIIETAIREKAD
                     LIGLSGLITPSLDEMEYFLGEMNRLKLDIPVLIGGATTSKEHTAIKLYPKYNYPVVYT
                     ANASRCVTVCATLMNPEAKAEFWEKTKAEYEEIQRKFAVRKPLRNGLSIEEARANRFD
                     GFSGEWADYVPPTPKQTGIIEYKNVPIATLRKFIDWSPFFMLWGLMGGYPDAFDYPEG
                     GEEARRVYNDAQRVLDEFEQNGKLNPSGIMGIFPAVREGDDIAILNEDRTACIGKSYH
                     LRQQSERGKNSKSPYNLCLSDFIADRESGQQDWFGMFAVCAGIEEHYLVESYKAAGDD
                     YNAILLQAVGDRLAEAMAEYLHFELRTKVWGYTVEDEDNGRLIREEYIGIRPAPGYPS
                     CPEHTEKQIIWDLLEVEQRIGMKLTESYAMWPAASVCGWYFTHPTSNYFTLGKIDEDQ
                     VLDYAKRKGWDELTAKKWLSVAMKQDVKSQAENI"
     gene            5374..7377
                     /locus_tag="PXE50_000603"
     CDS             5374..7377
                     /locus_tag="PXE50_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HDL5621538.1"
                     /translation="MIEKQNYHLVQLLKDSNYQLTQFSPAYIKKLEESIFLKSGKNGD
                     IPHIQCLVRKKDIKLTPEEAVRQLYLMNLHYEYDYPFERMELEYSVVFGREKKRADIV
                     IFDRDNPNAVYIMVELKKPKLKDGKEQLKSYCNATGAPIGVWTNGESISYYNRRDPNY
                     FKDIPDIPNAQQKLSDLLQERWTIQDLIDNDKIAKQRKSLKDLVIEMEDEVLANAGVD
                     VFEELFQLIFTKLYDEMESTRNKSRYLEFRNYGDTESELKAKIQSLFDRAKNKWEGVF
                     AESAKINLSPSHLAICVSSLEEVKLFNSNLDVVDEAFEYLINKSSKGEKGQYFTPRYV
                     IDMCVKMLDPKPEETVIDTAAGSCGFPVHSIFHVWEKQLKARGLERSHLFTAEEKLPE
                     QTDYVKEKVFAIDFDEKAVRVARTLNLIAGDGQTNVLHLNTLDYERWEDFTKEEEWND
                     VYGEGWKKLRKLRKTKNENRDFQFDVLMANPPFAGDIKETRILARYELGKNSKGKQQS
                     KVGRDILFIERNLDFLKDGGRMAIVLPQGRFNNSSDKYIRDFIAERCRILAVVGLHGN
                     VFKPHTGTKTSVLFVQKWHDELCPKVEDYPIFFATMQKSSKDNSGDKIYVKNADGTLK
                     LDNHQHLIVEHDLFNHDNSTQDGIAEAFIEFAKKEKLSFVGKD"
     gene            7476..8834
                     /locus_tag="PXE50_000604"
     CDS             7476..8834
                     /locus_tag="PXE50_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL5621539.1"
                     /translation="MDSTFFLKKYLNHPSFNFPLSLNEVSLIKSGTTPTDRDDNLKEG
                     VVLLKTNDIRNNLLNKYSSVDYFISEDINEKMISSQLKEGDVLVNIVGATLEVVGRVA
                     YVSSTFPKANITQAMSFVRLKSKYNKELLPTYLFAFLQSSYGKIQINRNARPTGQYNL
                     NNEELGAIKVPLIDLETQKQVDKIIKQSNDFVQKSTQSYQEAETLLLENLGLRAFQAD
                     SNPVNVKSLKESFLQTGRLDAEYYQTKYEQYWNLIQSQDYVFIRDEYLHITQKPDWTK
                     PMYQYIEIGDVNIGDGSYQTNWIETQELPANAKTQAQTGDILISTVRPYRGAVTIIGE
                     NDQDLVVSGAFTVLRRKENSVFNNEVLKVLLRSELYKDWLLQFNVGTSYPVIKDNDIL
                     NLPIPKISGEIQEKIAEYIRQSNDLRQQAQNLLAQAKNNVEFEIENNSFNINELEVRG
                     GG"
     gene            8858..9592
                     /locus_tag="PXE50_000605"
     CDS             8858..9592
                     /locus_tag="PXE50_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL5621540.1"
                     /translation="MARSSYFARLAEWTLLEHLLVKQPENISVCSFGQSFGTSGRLDA
                     EYYQPKFASLFAQLANFKTMKLGEIVNLQKSVEPGSEAYQTEGIPFVRVSDLSKFGIS
                     QTDKYLHPKDFGNVVRPKKDSILLTKDGTVGIAYRVPQDLNVITSGAIVHLELKTDEV
                     LPDYLALALNSPAVQLQAERDAGGSIIQHWKPSEILDVVIPVLPKNIQQTISDKVQQS
                     FALRVESEVLLEKAKILVEQEIENMR"
     gene            9595..10230
                     /locus_tag="PXE50_000606"
     CDS             9595..10230
                     /locus_tag="PXE50_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621541.1"
                     /translation="MPNHNQDLKKEWFNKARIDYHSPFLMLWLSCNSWYNFHYSLGKD
                     RTHIDRIKSDTSNQNKLYKEFERIFTSGKIKEKTNLWNNIEQLHFALVQAELKYSGSN
                     IPSEYSKFNLENVLIDFPNKTNSVAYQNLVIHNAKTRAGKLKTQYANAHDLGNLVLVE
                     DIQKIFSGLLEIIYQVRCHLVHGSLSPTPENHEVVKYCYLILWDCLKGFCD"
     gene            complement(10498..11235)
                     /locus_tag="PXE50_000607"
     CDS             complement(10498..11235)
                     /locus_tag="PXE50_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5621542.1"
                     /translation="MIKIENLTLAHGIQHLSCYLPKGKLIGIMGANGAGKSSLLKAIA
                     GILRPTSGEIWLENCKLHALSAVERSRQFAYLAQQLNVAWQLSVYDVIALGLPAPLPP
                     EQERQKVRSVAEQLAISHLLDNTYQQLSGGEQTRVQLARCLMKQAPILLADEPIAALD
                     PYYQIDIMQQLKALTPTQTCVVVIHHLPLAYRFCDEIILLKNGNLLVSGNTQAVLNAE
                     NIATAFGVKAEMDWEKREMWGIEKLEV"
     gene            complement(11232..12200)
                     /locus_tag="PXE50_000608"
     CDS             complement(11232..12200)
                     /locus_tag="PXE50_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDL5621543.1"
                     /translation="MKKLNIVLGSLLLLIVSNAAFYQLSDFALLKNAEGVLSDLRWLV
                     LGEIRLPRIGLAVLTGASLALAGNAMQGVFKNPLASPGLLGSSSGATAVSVFLLYYFS
                     APMGWLLFGGVAGALGAFLLVWLISFRHGTTMMILSGVAVNVLLGAAVTLLLSNAESP
                     WALAELYRWLQGSLVWATAEAVCWALPLILLGIVCLYRERRYLDLLTFGEETAATMGI
                     NLQRSFFTVSIGVALLVGATIPQTGTIGFIGLIAPHLARIWLKKPPSQLYLTSALIGA
                     LLLLIADLAVQYVPFFARIYIGTLTAILGVPFLIWILFTQQWRLAQ"
     gene            12381..12716
                     /locus_tag="PXE50_000609"
     CDS             12381..12716
                     /locus_tag="PXE50_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5621544.1"
                     /translation="MYHIERTEIFDQWLENLKDPLAVVTIARRIERAESGNFGDTKYI
                     AEGISEMRLNVSKGYRLYYAQKGSIIYILLNGGHKGTQQADIDKAKMLWAEIKQHMAE
                     QEKKNERII"
     gene            12700..13023
                     /locus_tag="PXE50_000610"
     CDS             12700..13023
                     /locus_tag="PXE50_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative addiction module antidote protein"
                     /protein_id="HDL5621545.1"
                     /translation="MNELYDAPIPQATREKFGIQPFDAAEYLANDELIALYLAETLKD
                     GTDEEFIQALNTVARAKGMNELAKKAGIGRESLYQSLSSSKPRFETIRKIISALNLEL
                     SVVKA"
     gene            complement(13013..14899)
                     /locus_tag="PXE50_000611"
     CDS             complement(13013..14899)
                     /locus_tag="PXE50_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HDL5621546.1"
                     /translation="MTQLDSVTVYSAYATPINQDKTASSVTVLTEKDFAARNATYVSD
                     VLKTVPGVAIGQQGGRGTLTSLFLRGAESRHTAVVIDGVKVNPINIGNFDFGGLPISN
                     IERIEVLRGEQSALWGSSAMGGVVYITTKSGLYKEKPFNAEVDLGLGSNNTRDASATL
                     SGFHNGFYYALHGDSHRTKGISALSKNHFSYTTETGSEVKTGGASERDGFHRDNGSLR
                     LGYDLGNKGVEVLAAQSSQTVHIDGYNSDVSGEYSRTRNQTFKLGGYWGNEQELLKHQ
                     ANISQFNSKATHFGSNARYSNEKQLNANYQLDVNFDREGEVTQAVSLLTDYAKTRYTS
                     DKYLREKTLSEKSAALEYRLFTEQDHSFSISGRYTDNSQFKNSITGRISGAYRLSPNL
                     CSDRLLLELAEPQQIRAMSPYSQKPLMMLDKLNTDKPTVEPELTALLPYADSTILLNE
                     TFYPQLTARLKQLGFKLVALNDSPQTPEQLFTLILQLGELTQNQAKAEKLVERLRLQK
                     IPLKQPLAETLILSETGMIEPHFPQYQTLLDLLGLSPLKSDLTPQNFSLEKLLLAQPK
                     QLLFLTDNQSYNNQAELLKHPALQKIWQKMSQNPPLVLPMKYTYCFDHGVWQGIQLMH
                     KLTP"
     gene            14929..15729
                     /gene="metF"
                     /locus_tag="PXE50_000612"
     CDS             14929..15729
                     /gene="metF"
                     /locus_tag="PXE50_000612"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HDL5621547.1"
                     /translation="MQQKWRMLWDSIDRLSPLKPKFVSVTYGANSGERDRTHSIVKSI
                     QEKTGIISAPHLTGIDATPEELKVIAKDYWDSGIRRIVALRGDIPKGYDKALFYASDL
                     VALLKSVADFDISVAAYPEVHPEAKSAQADLLNLKRKIDAGANHVITQFFFDVESYLR
                     FRDRCVSIGIDCEIVPGILPVTNFKQLQKMAAVTNVKIPTWMGKMYEGLDDDQTTRNL
                     VAASIAMDMVKVLSREGVNDFHFYTLNRSELTYAMCHTLGVRPDLTTA"
     gene            complement(15778..16938)
                     /locus_tag="PXE50_000613"
     CDS             complement(15778..16938)
                     /locus_tag="PXE50_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621548.1"
                     /translation="MKKSILLILSLFSASLFADVQLSPLPLPQIGKVSQFDLSEQGEL
                     VVINQQKQLWRVTQQAQKLADGVSTEIEPKAQYQRIALADQNGHFMLWTADKIYTSNI
                     PLAPKATMTALNFATIAVTKQNGQFKLARIETQGNQATITATAETEVLPDAHPLQIDF
                     DAETPNQGHIAVLAKPDDFTYQHGVLGDDVEAGEIQFLERHTLNPLAEKLTQQGRVFE
                     ANRWATFTENGKTKIVSVISGDGNGASTVVIGVKDGKLSIEAESEPLSTNRWQSPFIF
                     NRKLYAIQMPHLKGNLVEYSLKGNQLAERFITSGLSNHRYGDHETNLVATTETFALIP
                     QMGYQQVVVLDKTGKITELPTALPAGIKQTKADSNKAYLLLKNGEIWVAEEK"
     gene            complement(16998..18014)
                     /gene="galE"
                     /locus_tag="PXE50_000614"
     CDS             complement(16998..18014)
                     /gene="galE"
                     /locus_tag="PXE50_000614"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HDL5621549.1"
                     /translation="MAILVTGGAGYIGSHTLVELLNENREIVVLDNLSNSSEVSLERV
                     KQITGKSVKFYQGDILDRDILRKIFAENQIESVIHFAGLKAVGESVREPLRYYQNNVT
                     GSIVLVEEMLKANVNTIVFSSSATVYGDPQIIPIVESCPVGGTTNPYGTSKYMVERIL
                     EDTVKAFPQLSAVVLRYFNPVGAHESGLIGEDPNGIPNNLMPFISQVAVGKLPQLSVF
                     GGDYNTHDGTGVRDYIHVVDLALGHLKALDKHQNDAGFHVYNLGTGTGYSVLDMVKAF
                     EAANGITIPYKVVDRRPGDIAVCYSAPQKALEQLGWETERGLEQMMKDTWNWQKNNPN
                     GYKG"
     gene            complement(18102..18263)
                     /locus_tag="PXE50_000615"
     CDS             complement(18102..18263)
                     /locus_tag="PXE50_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HDL5621550.1"
                     /translation="MNETLLNNLVCPVSNEKLEWDKENNRLINPKLNIAYPIKNGIPE
                     LLPEAGVAL"
     gene            complement(18241..19242)
                     /gene="lpxK"
                     /locus_tag="PXE50_000616"
     CDS             complement(18241..19242)
                     /gene="lpxK"
                     /locus_tag="PXE50_000616"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HDL5621551.1"
                     /translation="MKIWQTKSLITWLLSPLSLLFWLISQARKRLYSLNILQSYRSPL
                     PMLVVGNISVGGNGKTPVVVWLVEQLQQRGVKVGVISRGYGGKAKTFPQLVTRESSAE
                     MVGDEPVLIVQRTNVPLAISPNRQQSIELLLNQFEPDIIITDDGLQHYALQRDMEWVV
                     VDGVRRFGNGFVLPAGGLRELPSRLNSVQAVICNGGTPQANEHLMTLEPSDAINLVTN
                     QRKPLSEFTQPCVAIAGIGHPPRFFTMLEKLGIPLAKTQGFADHQAFDKAQLAQFADS
                     QTPLLMTEKDAVKCHDFAQPNWWYVPVSATFSEKSTACLLAPILQKLGKEDERNTTQ"
     gene            complement(19244..19648)
                     /locus_tag="PXE50_000617"
     CDS             complement(19244..19648)
                     /locus_tag="PXE50_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5621552.1"
                     /translation="MKVHEKIKLLRENNHWTQDEMAQKLSMTTKGYAKIERGETISNL
                     PKIEQIAEVFNMDICELLSYGEEGKIYINNTDNNLTNSFISLGNGVEEIQRLQLIISH
                     KDELLAHKEEIIENQKRELALLRDLVETLKNK"
     gene            19783..19965
                     /locus_tag="PXE50_000618"
     CDS             19783..19965
                     /locus_tag="PXE50_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621553.1"
                     /translation="MNNQYNPLYGMLGILASAASVILPLYAAYKDYQFGENMLSLMDI
                     IIFPLGIVRGLMYLFG"
     gene            19969..20298
                     /locus_tag="PXE50_000619"
     CDS             19969..20298
                     /locus_tag="PXE50_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621554.1"
                     /translation="MKKYLFFAFMTLSNVAYPNLDEWYSASDKERREFIAKHFAEETV
                     RSDRNTPYDYAMCTGRMFAKQLTRDEVKDYPLANTKPQYLTRDRRIEIMSNLPREILQ
                     NCAKYIQ"
     gene            complement(20334..21086)
                     /locus_tag="PXE50_000620"
     CDS             complement(20334..21086)
                     /locus_tag="PXE50_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HDL5621555.1"
                     /translation="MAYKPPFTVTTKMLNLVVEISHKLGTLQLDFERNLHLRKNNRLR
                     SIQASLAIEANSLTIEQVTAIIKGKKVLGHPKDIREVKNAYDAYDEMMHYNPYSIKDF
                     LKAHKFLTADLVNDAGAFRSKDVGIYNFSGQLVHMGARPQFVENLINELFSWAKQDDT
                     PALIKSSVMHYEIEMIHPFSDGNGRMGRLWQNVLLAQWNPLFAWLPIETMVYENQQRY
                     YQMLSLADSQNDSTGFIEFMLEMILETLLKLK"
     gene            complement(21125..22372)
                     /gene="clpX"
                     /locus_tag="PXE50_000621"
     CDS             complement(21125..22372)
                     /gene="clpX"
                     /locus_tag="PXE50_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATP-binding subunit ClpX"
                     /protein_id="HDL5621556.1"
                     /translation="MAFEKEPHCSFCGKKRTEVDQLVEGTEGYICNECIEESYALLHG
                     EEEPLIDENQDDEGSFFTNVPTPHELHAHLDDYVIGQEHAKKVLSVAVYNHYKRLRSA
                     LSNHQATNGVELGKSNILLIGPTGSGKTLLAETLARRLNVPFAVADATTLTQAGYVGE
                     DVENVIQKLLMKCDFEAEQAERGIVFIDEIDKITRKSESASITRDVSGEGVQQALLKL
                     LEGTVANINPQGGRKHPKGETIPVDTSKILFICGGAFAGLDKIVEARTNTQGGIGFAA
                     ALKKDKDRQDLTELFKQVEPEDLVKFGLIPELIGRLPVVTPLQELDEEALIQILTEPK
                     NAIIKQYQALFEMEGVELHFTKDALISIAQKAISRKTGARGLRSIVENLLLDTMYDLP
                     TLNAKKVTIGKGCVENGDKPKVE"
     gene            complement(22372..22965)
                     /gene="clpP"
                     /locus_tag="PXE50_000622"
     CDS             complement(22372..22965)
                     /gene="clpP"
                     /locus_tag="PXE50_000622"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HDL5621557.1"
                     /translation="MALVPMVVEQTSKGERSYDIYSRLLKERIIFLNGQVEDNMANLI
                     VAQLLFLEAEDPEKDIYLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQAASMGAF
                     LLSAGAKGKRFALPHARIMIHQPLGGARGQATDIQIQAEEILRLKATLTRRMAEHSGQ
                     SYEKVLADTERDNFMSAEEAAEYGLIDKVLTSRSEVA"
     gene            23077..23460
                     /locus_tag="PXE50_000623"
     CDS             23077..23460
                     /locus_tag="PXE50_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SufE family protein"
                     /protein_id="HDL5621558.1"
                     /translation="MTLTEIYQKFERCKSWEERYRLLIQLSRLLPKPSEQELAQIAEI
                     EGCESRLWFEFQAEPRKVVAYSDARLMQGILFIVSVALTEKTAEELKGFDLKTMFDEL
                     KISQNLTSTRLNGLGQLQKHIMMNL"
     gene            complement(23564..23640)
                     /locus_tag="PXE50_000624"
     tRNA            complement(23564..23640)
                     /locus_tag="PXE50_000624"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(23604..23606),aa:Asp,seq:gtc)
     gene            complement(23729..24484)
                     /locus_tag="PXE50_000625"
     CDS             complement(23729..24484)
                     /locus_tag="PXE50_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDL5621559.1"
                     /translation="MKKSIYDTPIFFERYQQLRQNPISMNEVVEKPTMFSLLPDLTGK
                     KVLDLGCGTGVHLAHYLTLGAEKVVGLDLSELMLQQAESDLSAHWQKGNDFSLYCLPM
                     ERLNEISEGDFDVVTSSFAFHYIADFSELLAKISQKMTACGTLIFSQEHPIVTCYREG
                     YRWEKNQEKQQVAYRLNYYREEGERDRSWFQQPFKTYHRTMATIVNNLIQGGFEIVQM
                     EEPMLAGQPRWHNEFKDLQHRPPLLFIKAIKQK"
     gene            complement(24544..25539)
                     /gene="trpD"
                     /locus_tag="PXE50_000626"
     CDS             complement(24544..25539)
                     /gene="trpD"
                     /locus_tag="PXE50_000626"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HDL5621560.1"
                     /translation="MQALLDKLFANQALAQAESHRFFSEVIKGNVSNEQLAAALIALK
                     LRGETVDEIAGAAKAALENANPFSTPDYPFADIVGTGGDGHNTINISTTSAIVAATMG
                     YKIAKHGNRSVSSKTGSSDVLSHLGINVDVSPETARLALDETNICFLFAPTYHSGFKY
                     AAPVRQALKTRTIFNILGPLVNPAHAKRQLLGVYSPELVKVYAETVKALGYEHTIVVY
                     GAGLDEVAVHGETQVAEIQNGQIDYYTLTPEDFGIERHSLEDLKGGEPAENAEKVTAI
                     LQGKGKLAHIDAVAANVALLMKTFGEDDLKANVQKVKETLESGKALETLRKLSTY"
     gene            complement(25557..25943)
                     /locus_tag="PXE50_000627"
     CDS             complement(25557..25943)
                     /locus_tag="PXE50_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005543439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tautomerase family protein"
                     /protein_id="HDL5621561.1"
                     /translation="MISVYGLKQTLADRRALIADVIFDCMQMSLGVPKQRHALRFDLL
                     DAENFYPPINRSQDFIVIEINLMQGRSEQLKKRLIKGLFSALHTKVGIVPMDVEITIK
                     EQPEHCWGFRGMTGNEATDLEYQAHR"
     gene            complement(25936..26526)
                     /locus_tag="PXE50_000628"
     CDS             complement(25936..26526)
                     /locus_tag="PXE50_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HDL5621562.1"
                     /translation="MANILFIDNFDSFTYNLVDQFRELGHQVTIFRNDYPLEDFLAKA
                     ETTENCLVALSPGPGNPAEAGNLLEIIRRLKDKVPMIGICLGHQALIEAFGGKVVHTG
                     TVLHGKVSRIEHDNQAMFSGINNPMLVARYHSLMGDELPAEFIVNAKFEHIVMAIRHK
                     TLPICGFQFHPESILTVQGTKLLKQSVEWLLGEKND"
     gene            complement(26536..28092)
                     /gene="trpE"
                     /locus_tag="PXE50_000629"
     CDS             complement(26536..28092)
                     /gene="trpE"
                     /locus_tag="PXE50_000629"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HDL5621563.1"
                     /translation="MPQLTITQTELPYFADTTRVYYALCGERPHTLLLDSAEIQSKNS
                     VKSLLFAKSAVHIFCEDQTVTFHALTPNGEAVLPLIANALSLLNPAPTCKFLDKNDRL
                     QAIFPTISNQLDEDSKLKTTTVFDGLRTVSQLFADSTSPIYLGGLFSYDLVANFIPME
                     NISLQDDGLSCPDYTFYLAEQLVTIDHQTETAVLNTFCFEPNEQTNLNQQAVEFTQKL
                     ANLSHIELPLANQTATSEATANIEDEDFKAIIRKLKHHINIGDVFQIVPSRRFSLPCP
                     NTLASYKQLKINNPSPYMFYMQGENFTLFGASPESALKYSQANRQLEIYPIAGSRPRG
                     FDEQGNIDPELDSRLELELRLDQKELAEHLMLVDLARNDVARVSESGTRRVVDLMQID
                     RYSQIMHLVSRVIGTLRKDLDALHAYQACMNMGTLTGAPKIKAMQLIYQVEQQKRHSY
                     GGAVGYLTSDGNLDTCIVIRSAFVQNGIAYVQAGCGEVLDSDPQLEADETRHKARAVL
                     KAIGQVNAKA"
     gene            28234..28851
                     /locus_tag="PXE50_000630"
     CDS             28234..28851
                     /locus_tag="PXE50_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HDL5621564.1"
                     /translation="MTQFFYIHPDNPQQRLINQAVEIIRNGGVIVYPTDSGYALGCAM
                     GDKHAMDRIVAIRKLPENHNFTLVCSDLSELSIYALVNNQAYRLIKNNTPNPYTFILP
                     ATKELPRRLMTKRKTVGIRVPDNAIALALISALGEPILSCSLMLPETEMTESDPDEIR
                     DHLQNRVDLIIHGGYLGQQPTTVVDLTDDVPVIIREGSGDPTSFN"
     gene            28997..30064
                     /gene="rluB"
                     /locus_tag="PXE50_000631"
     CDS             28997..30064
                     /gene="rluB"
                     /locus_tag="PXE50_000631"
                     /EC_number="5.4.99.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2605) synthase RluB"
                     /protein_id="HDL5621565.1"
                     /translation="MTTFQKKSTATFRADKRGESRPSFKKEEQKSERKFGKTSEKPPR
                     PTSKPLTQRIAKKVEKTTASEVASQEKKAKVVGEKLQKILARAGQGSRRELEEIIAAG
                     RVSVDGKMATLGDRVQVSSSTKIRIDGHLVNLMPAQKEICRVLMYYKPEGELCTRSDP
                     EGRSTVFDRLPRLSGARWIAVGRLDINTSGLLLFTTDGELANRLMHPSREVEREYSVR
                     VFGNIDDAMLQRLRKGVQLEDGPANFKQIKVVGGTGLNQWFDVTLTEGRNREVRRLWE
                     SQGVEVSRLIRIRYGNIKLDKGLPRGGWEEMGLEQVNYLRELVGLPPETETKVEVGVN
                     RRRTNIRQIRKAVKQHQKYRG"
     gene            30130..31902
                     /locus_tag="PXE50_000632"
     CDS             30130..31902
                     /locus_tag="PXE50_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HDL5621566.1"
                     /translation="MSWDIVATLAVTGIAVFLFATEKMRMDVVAILVLCSLVLLGQVD
                     TKSALSGFSNSATVTVTAMFVLAAGLQNSGALDSVGSLLAKVKSPWLFLLVLCGVNAA
                     VSPFVNNTAVVAVLIPIVIAAAQNIKMAPSKALIPLSFSSQMAGVCTLIGTSTNLLVN
                     AIAQKQGHSGFGMFEFAPLGIIFLVVGVAYLLVTSRFLLPESHLQLEDGEGFGKYVSE
                     LKVNKDSVLIGKSTFESGLNEEFNLFTIGVLRDGERLSTPSHQVLQKHDILLLRGESE
                     NLAKVREKYGLHHVVYGRRENDEDNLDEDLMVAEVMISPISRWIGGTIPILQQRWNKN
                     ATVLGIQRQSKVIRERLRTTAFKMGDILLLTLPKEDMETLRQDKDFIVLSSDLVKTEE
                     SWKSKFALGVMVLVVATAALGWVPISVSALIGAVAMCVAGCLTAEEAYQSIDWKIILV
                     LAGLLPLGEAMANSGAAQFIVDNTLGKVGEFGPLVVLAVLYLLTMVLTEFMSNAGTAV
                     LLTPIAVSTAKMLGVDASPFIIAVMFAAATSFMTPVGYQTNTMVYGAGGYKFTDFIKI
                     GLPLNVIYWILGIVLIPIFFPFNP"
     gene            complement(31992..36143)
                     /locus_tag="PXE50_000633"
     CDS             complement(31992..36143)
                     /locus_tag="PXE50_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA-like family protein"
                     /protein_id="HDL5621567.1"
                     /translation="MNKIYRIVWNHAKRTWIVASELSRSANKSNATNTSLTTNIIKLS
                     TLSLALSAGFASAATYSPTYGTIPDNNPQTSIAIGDGSKVNSTLVSTITGLEGNSGKV
                     STALGYNTTATADFSTALGGFANASFASTAVGGQATADKRSVAVGYNATAMGLREVFI
                     GDHAGLNHSNSTEYNIGIGYSASSNVTGNNTISIGNTAGDGTSGSHNIAIGTYANAKL
                     AGPTTNVTSDDNIAIGNSALANGVNNYKTTAATGETVIGKATAVGSHANATGIVSSAY
                     GAEANATAIHSTAIGAKSQANGDNSTAIGYEAKTSGHGATSLGYYANATANLTTAVGT
                     NAGATSDYASAFGREANASGGSATALGNRATASGAASVALGVSAKATNQRTIAIGESS
                     NASAFNATAIGRNATAEHTDSIALGSNSVTAIAIPTTNATVNGITYSDFAGTNPIATV
                     SIGAEGKERTITNVAAGRISLSSTDTINGSQLYLTQQAIGNVAATTANILGGGAAVTE
                     NGNITFPTYALVNGTPDADKEGKQGRYTTVSAALSALNTAVISPLTFAGDTGTNFERH
                     LGSTVKIKGGSTGILTENNIGVVADGNSTLTIKLAEKVNLGANGSLTTGDTVVNNTGI
                     TIANGVADKPVSLTKSGLDNGGNKIANVAAGDVDTDAVNVSQLKQAISKFATHYVSIS
                     DDGIQRANYDNSGSSGVNPMAIGVATSANGELATALGSEAEANGERTTAVGPRATADG
                     MNATSIGYNANANATNALAVGSAANANADTSTAIGTASTATATRATALGSKSEATGEN
                     STAVGYEASSIGADSLAAGYNANASGTQSTALGNSANAGGIWSTSVGRNANAAGSSAI
                     ALGNSANAAGVASIALGVSSQATTTAAVALGQNAKATHQGSVALGTNSETVATVATKS
                     ATLNGNTYTFAGTTPSSTVSIGSVGNERTLTNVAAGRILDSSTDAINGSQLYAAYTEI
                     DGLNTKVNELSNGALTFVDDAGTEIVRKLGTSLNVKGGADATILTDNNIGVVATDANT
                     LTVKLAKDIDLTPAGSVAVGNSKLNNNGLTINNGPSVTMTGVDAGKLKITNVADGDIS
                     PISADAVNGSQLYDTANTIATALGGNSSVNANGAVSAPSYTVVDGAPTNEVSKTVNNV
                     GSAITALNDAVTSPLTFAGDTGTPSQRKLGSTVTVKGGVSNESQLTDNNIGVISNGNG
                     SLTVKLAKDIKVNSVTAQTVTANIAVADTVKTGDTTIDTNGLTIVGGPSITKTGINAA
                     GTKVTNVKAGTEDTDAVNFSQLKATEKNINNKINNIDSKVNKVDKRLRAGIAGATATA
                     GLPQAYLPGKSMLATAGDTYRNEAAIAVGYSRISDNGKVIYKLTGNSNTRGDFGGSIG
                     MGYQW"
     gene            36534..37265
                     /locus_tag="PXE50_000634"
     CDS             36534..37265
                     /locus_tag="PXE50_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide riboside transporter PnuC"
                     /protein_id="HDL5621568.1"
                     /translation="MGCSSFSTKLKQEFFSGWTTFEASWLIVFLAIQIGIFIYQPDTW
                     IATIAAITGILCVVFVGKGKISNYLFGLISVSLYAYISYTFQLYGEMMLNLLVYVPVQ
                     FIGFYFWRKNMTSENTVNNAGVEEVIAKALTAKQWVIVAITTIIGTFLYIELLKYLGS
                     ALAILDGATVVISIVAQILMVLRYREQWALWIIVNIMTISLWTAMYFQNGETSLPLLV
                     MYVMYLCNSIYGYYNWIKLHRKHQQ"
     gene            complement(37333..39372)
                     /gene="malQ"
                     /locus_tag="PXE50_000635"
     CDS             complement(37333..39372)
                     /gene="malQ"
                     /locus_tag="PXE50_000635"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HDL5621569.1"
                     /translation="MSNKQNTAHYFYSPNIKEYASPSAFEKIERLLNTDNDLQKNNQI
                     LPLVKVITQPNAEQQAVEISLNFTNVAKWQIVLENGEVRNGEIKAEQSVLTLPADLPL
                     GYHQLSISTENDEESCSLIVTPPKAFQPKPLEERKKLWGAFLQLYTLRSDNNWGIGDF
                     GDLKQFLANISDYGADFVGLNPIHALFPADPDAASPYSPSFRLWQNIIYIDVSAVEAF
                     QQSEQAQQWFHTKETQQQLAELRAKDFVDYSQVAQLKLKALQFAFEHFSQSSQQQSQT
                     AFDAFIEQAGEPLKIQATFDALHHWISSEFGEKGGWTNWAEEYQSYYSPKVAEFQISQ
                     ATQIRFYMWLQFVANQQLAECNRFAQSLSMPIGFYRDLAVGVTQSGAETWADKALFVQ
                     EASIGAPPDMLAPNGQSWGLSPMHPHILQSRGYQPFIDLVRANMKHCGALRIDHILGF
                     ARMWWVANGESAKEGIYVRYPLEDLLSILALESQRHQCLVIAEALGIVPEGILDSLEQ
                     KGIFAYNVFYFEKAENAFKPLENYPYQAMTTLSTHDLPTIQGYWKGYDFELGEKFDTY
                     PSKAVLRKLKEERSYDRLNIRNAVEKVIALEPNEVGVTIKFTHQLQRYVAHTHSALFG
                     TQPEDWLNMLEPVNIPGTSTEYPNWRRKLSATTEQIFANKDIQQLLKDINEIRKG"
BASE COUNT        11380 a         7966 c         8536 g        11689 t
ORIGIN      
        1 aattttagga taaataaaaa ataaccgact aaattactag gtaattcaat cggttataag
       61 tggtcggata tttaataaaa aatcttattt ttatgaatag ctattcagct tgtccccaag
      121 gagcaacctt aaacaacatt agcattcccg gaataccaat aaagaaacag agccagaaga
      181 attggtaata gcccatcatt tccactaaat gccctgtgta tgcccctaac attttgcttg
      241 gtagggcagc aaggctggtg aaaatggcga gctgcattgc agtgtaagcg ggattagttt
      301 cacgagccat aaaggcaacg aaagccgctg tgcctaaacc cacgcccaga tattcacctg
      361 ccatcactaa gcctaatttc caaagctcgg cagctccaat gctttcggta gggaaatgct
      421 caaaactggc aaggtaagcg aagcctaaaa tagtaattaa ttgtacaaat ccgaacagcc
      481 ataaggctcg gttaacgccc aatttcaaca ttgccacgcc accaataata ccgccgccaa
      541 tgctgcacca aagtgaagtt attttcacaa tgccggcaat gtgcgattta gtaaaaccca
      601 tatccaaaat aaatttggtt tgtagcgtag ttgcaaggga atcgcctaat ttatatagga
      661 aaataaatag aatcagccca atcgctcctg ccacgccttt acgggtgaaa aactctttga
      721 acggatcgac aaacgccata taaaacggct tagaacggtc gattggctta tgattcggct
      781 cggcagcgat tattagcgta acgaataagc aaggcactaa aaaagcagcg gtaatcagaa
      841 atacggtatc ccacgcatag tgatcggcta aaaataatga aagcccaccc ggaatcagcc
      901 ctgcaatacg ataagcatta acgtggatag agttacctaa cccgagttcg ttatccgata
      961 aaatttcacg ccgaaaggca tccaccacaa tgtcttgcgt ggcggaaaga aaagctaata
     1021 gcacagaaag agtaacaata attgaaatat cttgcactgg gttgaacaag ccaaagctgg
     1081 ctaaaatcac caatagcccg atttgtgaaa tgaaaatcca gcttttgcgt ctgcctaaaa
     1141 aaggtggaaa gtagcgatct aacaatgcag cccacaggaa tttccacgtg tagggcaaag
     1201 aggtcagggt gaaggcggca atagttttaa tatctaaatt ggcactggtt agccaagccg
     1261 gcattagctg aattaacaca aacaacggta aaccggaaca aaagccggtg taaacacaaa
     1321 gcaacatatt tttagtaaaa atctgttgcc agatagagcg tttgggttcg tgacaagcgg
     1381 tcatattttt cctacatttt gcaaaataaa aaggggaaga actgagccaa tatagcataa
     1441 ttttaaaggc gactctaacc ctttccattt cgtcacagat aaggtttgac agccttgcga
     1501 catatttcta ttattccttt taatcaaact aaaaaactgg aagcagagta tgaacacgca
     1561 gcatagaacc gaattacttc aaaatgccct taccgaacgc attcttatct tagacggtgc
     1621 gatgggaacg atgatccaaa aatataaact aaccgaatct gatttccgag gtgaacgttt
     1681 taaaaacagt accatcgatc ttaaaggcaa taacgaccta ctcacactca cccagccact
     1741 cctgatttct gctattcacg agaaatattt agccgccggt gcggatatta tcgaaactaa
     1801 tacctttagt gcgacgacca ttgctcaagc agattatgaa cttgaaagta ttgcttatga
     1861 gctgaatctt gtgggggcaa aacttgcccg tcttgccgcc gataaattct ccatccctga
     1921 aaaacctcgt tttgttgccg gtattcttgg gccgactaac cgtacttgtt cgatttcccc
     1981 tgatgttaat gaccccggtt tccgtaacat tacctttatg caactggtgg aagcctatgc
     2041 cgaggcaacc cgtggtttga ttgaaggtgg ggcggatctg attatgatcg aaaccatttt
     2101 cgataccctg aatgccaaag cggcggtgtt tgcaattgaa acggtgtttg atgaactggg
     2161 cgtgaaattg ccgataatga tctccggcac cattaccgat gcctcagggc gaacgctgtc
     2221 agggcagacc acggaggcgt tttataactc gctccgccac gccaaaccgc tgacgttcgg
     2281 cttgaactgt gcgctcgggc cgaaggaact ccgcccttat gtagagatga tgtcgaaaat
     2341 cagtgagact tttgtttcgg ttcacccgaa tgccggcttg ccaaacgctt ttggcgggta
     2401 cgatttaggg gcggaagaga tggcgactta catcaaagag tgggcagaac tcggctggct
     2461 gaatattgtc ggcggctgtt gtggcaccac gccggagcat atccaagcct ttgccgaagc
     2521 aaccaaaggc gttgcgcctc gtaaattacc tgaaattcca accgctatgc gtttgtcggg
     2581 cttagaaccg ctgacgattg acgataattc gctgtttgtg aatgtgggcg aacgcaataa
     2641 cgtcaccggt tcggcaaaat ttaagaagct gattaaagaa gaaaaatttg cggaagcgat
     2701 tgaaattgcc atcagccaag tggaaaacgg ggcgcaggtg attgacgtga atatggacga
     2761 ggcgttgctc gattccaaaa aatgtatgac ccgtttcctc aacattcttg ctaccgaacc
     2821 tgaggcggca aaagtgccga ttatgattga ctcctcgaaa tgggaggtga tcgaggcggg
     2881 cttgcaaacg gtgcagggca agccgatagt gaactccatt tcactcaaag agggcgaaga
     2941 gaaatttatt caccaagcca aactctgccg ccgctatggg gctgcggtgg tggtgatggc
     3001 atttgacgaa gtcgggcaag cggataccga agaacgcaag gtagaaattt gtacccgagc
     3061 ttatcggatt ttggttgatc agctcggctt cccaccggaa gacattattt tcgacccgaa
     3121 catttttgcg attgccaccg gtattgaaga acacaataac tacggcgtgg attttatcca
     3181 agcctgtgag cggattaaac gagacttgcc acacgccaaa atttccggcg gggtgtcgaa
     3241 tgtctctttc tctttccgag gcaacaatgt ggtgcgtgag gctattcacg ccgtgttcct
     3301 ctactatgcg atcaaagccg gaatggatat ggggatcgtg aacgcagggc agttggcgat
     3361 ttatgacgac ctcgaccctg aactgcgaga ggcgattgaa gatgcggtgc tgaaccaccg
     3421 tcatgacact accgaccgcc tgttggaaat ttccgaaaaa tatcggggcg taaaagtaga
     3481 aagtgccgat gaaagtgccg ccgagtggcg aaatttacct gtggcagagc gtttaaaaca
     3541 cgccctcgta aaaggcataa cgacctacat tattgaagat accgaagagg ctcgccagca
     3601 atttgcctct ccgctggaag tgattgaagg gccgctcatg gcgggtatgg acgtggtggg
     3661 cgacctgttc ggagacggca aaatgttcct gccgcaagtg gtgaaatcgg ctcgggtaat
     3721 gaaacagtcc gttgcctatt tagagccgta catcaacgcc accaagcaga aaggatcgag
     3781 caacggcaaa atggtgatcg ccaccgtgaa aggtgatgta cacgacatcg gcaaaaacat
     3841 cgttagcgtg gtgttgcagt gcaataactt tgaagtgata gacttaggcg tgatggtgcc
     3901 tgccgatgta attatcgaaa ctgctattcg ggagaaagcc gatctcattg ggttaagcgg
     3961 actaattacc ccatcgctgg acgaaatgga gtatttttta ggtgaaatga accgcttgaa
     4021 gctcgatatt ccggtgctga ttggcggcgc aacgacctca aaagagcata cggcgatcaa
     4081 actttatccg aaatataact accccgtagt ctataccgcc aacgcttcac gttgcgtaac
     4141 cgtctgtgcg accttgatga accctgaggc aaaagccgaa ttttgggaaa aaaccaaagc
     4201 cgaatacgaa gaaattcagc gtaaatttgc cgttcgcaaa ccacttcgca acggtttatc
     4261 tattgaggag gctcgagcca atcgttttga cggatttagt ggcgaatggg cagactatgt
     4321 gccgccaacg ccaaaacaga ccggcattat cgagtacaaa aatgtaccga ttgccaccct
     4381 acgcaaattt atcgactggt cgccgttctt tatgctctgg ggcttaatgg gcggttatcc
     4441 tgatgccttt gattatccgg aaggcggcga agaggcacgc cgtgtctata acgatgccca
     4501 acgggtgctg gacgaatttg agcaaaacgg caagctcaac ccaagtggga ttatgggcat
     4561 tttccctgcc gtgcgtgagg gcgatgatat tgcaatttta aacgaagatc gcaccgcttg
     4621 tatcggcaaa tcctaccacc tccgccaaca atccgaacga ggcaaaaaca gcaaaagccc
     4681 gtacaacctc tgtttaagcg attttatcgc cgaccgagaa agcggacaac aagactggtt
     4741 cggaatgttc gccgtttgtg ccggcattga agaacactat ttagttgaaa gctacaaagc
     4801 ggcaggcgat gactacaacg ccattttgct ccaagccgtt ggcgaccgct tggcagaagc
     4861 aatggcggaa tacctacact ttgagctacg taccaaagtc tggggctaca ccgtggaaga
     4921 cgaagacaac ggacgcttaa tccgtgaaga atacatcggc atccgccctg cgcccggcta
     4981 cccaagctgc ccggaacaca ccgagaaaca gataatttgg gacttgttag aggtggaaca
     5041 acgcatcggc atgaaactca ccgaaagcta tgccatgtgg ccggcagcaa gtgtctgcgg
     5101 ctggtacttc acccacccta ccagcaacta cttcactctc ggcaagattg atgaagatca
     5161 ggtgttggat tacgccaaac gcaaaggctg ggacgaactc acggcgaaga aatggttaag
     5221 tgtggcgatg aaacaagatg tcaagtcgca ggctgaaaac atttaatgta gtggcgggtt
     5281 ttaacccgcc tgttacaagc ggttggtttt gagataaaat atgcaaaatt tatctctctt
     5341 ttatgcaaag aagttatcat cgagaacaaa acaatgattg aaaaacaaaa ttatcactta
     5401 gtacaacttt taaaagacag taattatcaa ttaactcaat tttctcctgc gtatataaaa
     5461 aaattagagg aatctatttt cctcaaatca gggaaaaatg gagatattcc tcatattcaa
     5521 tgtcttgttc gtaaaaagga tattaagctc acacctgaag aagcagtacg ccaactctat
     5581 ttaatgaatt tgcattatga atatgattat ccatttgaac gaatggaatt agaatattct
     5641 gttgtattcg ggcgtgagaa gaaacgagcg gatattgtca tctttgatag agataatcct
     5701 aacgctgtct atattatggt ggagctgaaa aagccgaaat taaaagatgg taaagaacaa
     5761 ttaaaatctt attgtaatgc gactggagca cctattggtg tatggacaaa tggcgaaagt
     5821 atttcttact ataatcgccg tgatcctaat tattttaaag atattcccga tattccgaat
     5881 gctcaacaaa aactttctga tttattacaa gaacgttgga ctattcaaga tctgatagat
     5941 aatgacaaaa ttgccaaaca acgtaaatca ttgaaagatc ttgttattga aatggaagat
     6001 gaggtactgg cgaatgctgg agttgatgtt tttgaagagt tatttcaact tatttttact
     6061 aaactctatg atgaaatgga aagtacacgc aataaaagtc gttatttaga gtttcgtaac
     6121 tatggtgata ccgaaagtga attaaaggca aaaattcaat ctctatttga tcgtgcaaaa
     6181 aataaatggg aaggcgtatt tgctgaaagt gccaaaatca acctttcccc ttcgcatttg
     6241 gcgatttgtg tatcttcatt ggaagaagta aagctgttta attctaacct tgatgtagtg
     6301 gatgaagcat ttgagtactt aattaataaa tccagtaaag gagagaaagg acaatacttt
     6361 acgcctcgtt acgtcattga tatgtgcgta aaaatgctcg atccaaaacc tgaagaaaca
     6421 gtcattgata ccgcagcagg aagctgtggt tttccagttc attctatttt tcacgtttgg
     6481 gaaaaacaac ttaaagcgag aggattagaa cgctcacact tatttactgc tgaagaaaaa
     6541 ttgcctgaac aaacagatta tgtgaaagaa aaagtctttg cgattgattt cgatgaaaag
     6601 gcagtacgtg ttgctcgtac cctaaactta atcgcaggag atgggcaaac caacgtacta
     6661 catttaaata ccttagatta tgaacgttgg gaagatttta ctaaggaaga agaatggaat
     6721 gatgtatatg gagaaggctg gaaaaaatta agaaaattac gtaaaactaa aaatgaaaat
     6781 cgagatttcc aatttgatgt gctaatggca aatccgcctt ttgccggtga tattaaagaa
     6841 actcgtatat tagctcgcta tgaattaggc aaaaatagca aaggaaaaca gcaatccaaa
     6901 gtcggacgag atattttatt tattgaacgc aatttagatt tcttaaaaga cggtggacga
     6961 atggcgattg tgctaccaca agggcgtttt aacaattcca gcgataaata tattcgtgat
     7021 tttattgcag agcgttgccg cattttagct gttgtgggct tacacggaaa tgtgtttaaa
     7081 ccacataccg gcacaaaaac ttccgtacta tttgtgcaaa aatggcacga tgaactttgc
     7141 ccgaaagtag aggattaccc gattttcttt gccacaatgc agaaatccag caaagataat
     7201 tcaggcgata aaatctatgt taaaaacgct gatggcacac tcaaattaga caaccatcaa
     7261 cacctaattg tggagcacga tctatttaat cacgataata gtacccaaga cggcattgca
     7321 gaagccttta ttgaatttgc taaaaaagaa aagctctctt ttgtgggaaa ggattaagcc
     7381 catttgaccc tgctaaatat caggcattgt tagatgggct agaggtgagc gaggtttatt
     7441 tgagtaaggt tcgttctgca agttattcgg aacgaatgga tagtactttc tttttgaaaa
     7501 aatacttaaa ccatccgagt tttaattttc cattatcgct gaatgaggtt tctctgatta
     7561 aaagtggtac aacaccaaca gatcgagatg ataacttaaa agagggggtt gtcttattaa
     7621 aaaccaatga tattaggaat aatctattaa ataagtactc ttcggtagat tattttatta
     7681 gcgaagatat caatgagaaa atgatttcat cacaactgaa agaaggggat gttttagtaa
     7741 atatcgttgg tgcaactttg gaggttgttg gtcgggtagc ttatgttagt agcacttttc
     7801 caaaagcaaa tattacacaa gcaatgtctt ttgtaagatt aaaatcaaaa tataataaag
     7861 aattattacc aacgtattta tttgcttttt tacaaagttc ttatggaaaa atccaaatta
     7921 accggaatgc acgcccaaca ggacaataca atctgaataa tgaggagctt ggtgcgatta
     7981 aagtcccctt aattgatcta gaaacacaaa agcaggtaga taaaatcatt aagcaaagta
     8041 atgattttgt acaaaaatca acacaaagtt accaagaagc tgaaacttta ttattagaaa
     8101 atctcggttt gagagctttt caagctgata gcaatcctgt aaatgttaaa tccttaaaag
     8161 agagtttctt acaaacagga cgattagatg cagagtatta tcaaactaaa tatgagcaat
     8221 actggaattt aattcaatcg caagattatg tttttattcg tgatgaatat ttacatatca
     8281 cccaaaaacc tgattggaca aaaccgatgt atcaatatat tgaaattggt gatgttaata
     8341 ttggtgatgg ttcatatcaa acgaattgga tagagacaca agaattacct gctaatgcta
     8401 aaactcaagc ccaaacaggt gatattttaa tttcaaccgt tcgcccttat cgtggtgcag
     8461 taacaattat cggtgaaaat gatcaagatt tagttgttag tggtgcgttt acagtattac
     8521 gcagaaagga aaactctgtt tttaataatg aagttttaaa ggtgctatta cggtcagaac
     8581 tatataaaga ttggttacta caatttaatg taggtacgag ttatcctgta attaaagata
     8641 acgatatttt gaatttacca attcctaaaa taagtggaga aatccaagaa aaaattgctg
     8701 aatatatccg ccaaagcaac gatttaaggc agcaagcaca aaatttactc gctcaagcta
     8761 aaaataatgt agagtttgaa attgaaaata attcatttaa tatcaatgag ttagaagtgc
     8821 gggggggggg gtagatcctg ctaagcctta tggtttattg gcgagatctt cttattttgc
     8881 acgtttagca gaatggactt tattagaaca tttacttgtc aaacagcctg aaaatatttc
     8941 ggtatgttca ttcggtcaat cattcggtac aagcggtcgt ttagatgcag aatattacca
     9001 acctaaattt gcaagcttat ttgcacaatt agccaatttc aaaacgatga aattaggtga
     9061 gattgttaat ttacaaaaat cggtagaacc gggctcggaa gcttatcaaa cagagggaat
     9121 accctttgtg cgtgtatcgg atttatctaa attcggcatc agccaaacag ataaatactt
     9181 acatccgaaa gattttggca atgttgtaag acctaaaaaa gacagtatat tactgactaa
     9241 agacggcaca gtcggcattg cttaccgtgt tccgcaagat ttgaatgtga ttacatcagg
     9301 ggcaattgtg catctagagc ttaaaactga cgaagtttta cccgattatt tggcgttagc
     9361 attgaattct cctgctgtac aattacaagc ggaaagagat gcgggaggct ctattatcca
     9421 acattggaaa ccgtctgaaa ttttagatgt agtgattccg gtattaccta aaaatatcca
     9481 gcaaaccatt agcgacaaag tacaacaaag ttttgcattg agagtagaaa gtgaagtttt
     9541 actggaaaaa gctaaaatac ttgtagaaca agaaatagaa aatatgaggt aataatgcct
     9601 aatcataatc aagatttgaa aaaagagtgg tttaataaag caaggataga ttaccactct
     9661 ccttttttaa tgttatggct cagttgtaat agctggtata acttccatta ttccttaggt
     9721 aaggatagaa cacatattga tagaataaaa tcggatacca gtaatcaaaa caaactttat
     9781 aaagagtttg aaagaatatt cacctctgga aaaataaaag aaaaaactaa tttatggaat
     9841 aatattgagc aacttcattt tgcattagtt caggcagagt taaaatattc aggtagcaat
     9901 attccaagtg aatattctaa atttaacttg gaaaatgtgc ttattgattt tcctaacaag
     9961 acaaattctg tagcatatca gaatctagtt attcacaacg caaaaacgcg tgcaggaaaa
    10021 ttaaaaacac aatatgcaaa tgctcacgat ttaggcaatt tggttttagt agaggatatc
    10081 caaaaaatat tttccgggtt attagaaata atttatcaag ttcgttgcca tttggtacat
    10141 ggtagcttaa gtccaacacc tgaaaaccac gaagttgtta aatattgcta tttgattttg
    10201 tgggattgtt taaaaggatt ttgtgattag ttattgtcaa taaagctaca agcggtcaat
    10261 tctcccaaaa ctttgcaaat ttccccgcaa aactgaccgc ttgttctcct ctatccattc
    10321 acctcaacca acttttctct ctacccctac tcaaaatcgg ttaaacaatc tgttgaggta
    10381 aatgttgtgt cggaatggga tttaatctta atgaaactga aaaaatcttc tgccaagcaa
    10441 atttccctaa aattggaagt tcatttccaa tttctcaaaa aatcacccaa accggaacta
    10501 cacttccaat ttttcaatcc cccacatttc ccttttctcc caatccattt cagctttcac
    10561 cccaaaagcc gttgcaatat tttcggcatt taagaccgct tgtgtgttgc cgctgacgag
    10621 taaattgccg tttttaagca gaatgatttc atcacaaaaa cggtaggcaa ggggcaaatg
    10681 atgaatcacc accacgcagg tttgtgttgg agttagggct ttgagctgct gcataatatc
    10741 gatttggtag taggggtcga gggcggcaat cggttcatcg gcaagcaaga tcggggcttg
    10801 tttcatcaaa caacgggcga gttgcactcg ggtctgttca ccgccggaga gctgttggta
    10861 agtgttgtcc agcaggtgag aaatcgccaa ttgttcggca accgaacgca ccttttgacg
    10921 ctcttgttca ggcggaagcg gtgcgggcaa gccgagtgca atcacatcat acaccgaaag
    10981 ttgccacgcc acgttgagct gttgggcgag gtaggcaaat tgtcggctcc tctcaacggc
    11041 ggaaagggcg tgcagtttgc aattttccag ccaaatttca ccgcttgtcg ggcgtagaat
    11101 gccggcaatc gctttgagca acgaggattt ccctgccccg tttgcgccca taatgccgat
    11161 caatttgcct tttggcagat agcaagagag gtgttgaata ccgtgggcaa gggtgagatt
    11221 ttcaatcttg atcattgtgc caatctccat tgctgggtga ataaaatcca aatcaaaaac
    11281 ggtacgccca aaattgccgt gagcgtgccg atgtaaattc gggcaaaaaa cggcacatat
    11341 tgcaccgcca gatctgcaat cagcagtaac aacgccccga ttaaagcgga ggtaagataa
    11401 agctgggacg gcggtttttt cagccaaata cgggcaagat gaggggctat caagccgata
    11461 aaaccgatgg tgccggtctg tggaatcgtt gctccgacca acagcgccac gccaatgcta
    11521 acggtaaaaa aactgcgttg caggttgatg cccattgttg ctgccgtctc ttcgccaaag
    11581 gtgagcaggt cgagataacg ccgttcccga tagaggcaga caatgccgag caagatcaac
    11641 ggtaacgccc aacatactgc ctctgcggtt gcccagacta atgagccttg caaccagcgg
    11701 tagagttccg ccaacgccca cgggctttcg gcattggaaa gcagtaaagt caccgctgcc
    11761 ccgagcaaca cgtttaccgc cacgccactt aaaatcatca ttgttgtgcc gtggcgaaag
    11821 ctaatcagcc acaccagcaa aaatgccccc agcgcccctg ccacaccgcc aaacagtagc
    11881 cagcccatcg gggctgaaaa atagtagagc agaaatacgc tcaccgccgt tgcccccgaa
    11941 ctgctcccaa gcaaaccggg gctggcaagc ggatttttaa acacgccctg catcgcattg
    12001 ccggcaagcg caaggctggc gcccgtcagc accgccaagc caatacgggg cagtcgaatt
    12061 tcacccagca ccagccagcg cagatcgctt agcacgcctt ccgcattttt aagcaaggca
    12121 aaatcgctca gttggtaaaa ggctgcgttg ctaacaatca gcaacaacaa gcttccaagc
    12181 acaatgttta atttcttcat tcttctttct ctcatcaaac gtgcaaatta taccatagcg
    12241 ccaaagtcaa gctgaaaacg ctatttttgc gatcatcatc gaaaaactag cgtttgccga
    12301 atgtaaccca cgacaggctt tgctatattc cttcaatcag cctaagtttt gtatttaaaa
    12361 cattacagat tgggggtaga atgtaccata ttgaacgcac tgaaattttc gaccaatggc
    12421 ttgaaaattt aaaagatcca cttgctgtgg tgaccattgc aagacgtatt gaacgtgccg
    12481 aaagcggaaa ttttggcgat accaaatata tcgcagaagg aatttccgaa atgaggctaa
    12541 acgtcagcaa aggttatcgc ctttactatg cgcaaaaagg tagcattatt tatatactac
    12601 taaatggcgg acataaaggc acgcaacaag ctgatattga taaagctaaa atgctatggg
    12661 cagaaattaa acaacatatg gcagaacagg agaaaaagaa tgaacgaatt atatgacgcc
    12721 ccaattccac aagctactcg tgaaaaattt ggcattcaac ctttcgatgc cgctgaatac
    12781 ctcgccaatg acgagctaat cgccctttat ttggcggaaa cattgaaaga cggcacggac
    12841 gaggagttta ttcaagcatt gaataccgtg gcacgagcga aaggaatgaa tgagttagcg
    12901 aaaaaagcag ggatcgggcg tgaaagtttg tatcaaagcc tttccagcag taagccccgt
    12961 tttgagacta tccgcaaaat tattagcgca ttaaatttgg agttgtcggt cgttaaggcg
    13021 taagtttgtg cattaattgt atcccctgcc aaaccccgtg gtcgaaacag taggtgtatt
    13081 tcatcggtag gacaagcggt ggattttggc tcattttttg ccatattttt tgtaatgctg
    13141 ggtgtttgag cagttcggct tggttgttat agctttggtt atcggtgagg aacaataact
    13201 gtttgggttg cgctaacagc agtttttcta gcgagaaatt ctgtggcgtg aggtcgcttt
    13261 ttaatggtga cagaccgaga agatccaaca acgtttgata ttgcggaaaa tgcggttcga
    13321 tcatacccgt ttcgcttaga attaaagttt cagcaagcgg ttgttttagc ggaatttttt
    13381 gcaaacgtag ccgttccacc agcttttccg ctttggcttg attttgggtt agctcgccca
    13441 gttgtaaaat cagtgtgaaa agctgttcgg gtgtttgcgg actgtcgttt aatgcgacta
    13501 acttaaagcc aagctgtttc agccgtgcgg tgagttgcgg atagaaggtt tcattcagca
    13561 aaatggtgct gtcggcatag ggcaacaggg cggtgagttc aggctcaacg gtgggcttgt
    13621 ccgtgttcag tttatccaac atcatcaacg gcttttggga atagggcgac atcgcccgaa
    13681 tttgctgtgg ttcggcaagt tccagcaaca gacggtcgct acacaaattt ggcgataaac
    13741 ggtaagctcc tgaaatacgc ccagtgatag aatttttaaa ctgtgaatta tcggtgtaac
    13801 ggccactaat agaaaaactg tgatcttgtt cggtaaataa gcgatattct agtgccgcac
    13861 ttttttcgga taaggttttt tcacgcaaat atttatcaga ggtatagcgt gtttttgcat
    13921 aatctgtcag taaactgacc gcttgtgtca cttctccttc acggtcaaag tttacatcta
    13981 attgataatt cgcattaagt tgtttttcgt tgctgtagcg agcatttgaa ccgaaatgtg
    14041 ttgctttact attgaattgg ctgatatttg cttggtgttt cagcagctct tgttcatttc
    14101 cccaataacc gcctaattta aaagtttgat tgcgagtacg ggaatattca ccgctaacgt
    14161 ctgaattata gccatcaata tgaacggttt gggaagattg agcggcaaga acttctaccc
    14221 ctttgttacc gaggtcataa cctaaacgta aagagccgtt atcacgatga aagccatctc
    14281 gttcgcttgc accaccggtt ttcacttctg agcctgtttc tgtggtatag ctgaaatggt
    14341 ttttactcag tgcggaaatg cctttggtac gatggctatc accgtgtaag gcatagtaga
    14401 aaccgttgtg aaatccggaa agtgttgcgc tggcatcacg ggtattattt gagcctaaac
    14461 caagatcgac ctccgcattg aatggtttct ctttgtataa accgctttta gtggtgatat
    14521 aaactacacc acccatagca ctgcttcccc aaagggcgga ttgctcgcca cgcaacactt
    14581 cgatacgttc gatattgcta atcggtaagc caccaaaatc gaaatttcca atattaatcg
    14641 gattgacttt tacaccgtca atcacaaccg cagtatggcg agattctgcc cctcgtaaaa
    14701 ataagctagt aagagtacca cgcccacctt gttgcccaat cgccacgccc ggcacagtct
    14761 ttaacacatc actcacataa gtcgcattgc gtgcggcaaa atctttttcg gtaagaaccg
    14821 tcacgctgga agcggttttg tcttggttga ttggggttgc ataggcggaa tagactgtta
    14881 cggaatcaag ctgagtcatc tcattttgtg caaaagctgt acttgctagt gcaacagaaa
    14941 tggcgaatgc tgtgggattc tattgatcgc ctaagtcctt taaaaccgaa atttgtttcg
    15001 gtaacttatg gagcaaattc tggtgagcga gatcgtacac acagtattgt gaaatcaatc
    15061 caagaaaaaa cagggatcat ttcagctccg cacttaacag gcattgatgc aacaccggaa
    15121 gaattaaagg taattgccaa agattattgg gatagtggta ttcgccgaat tgttgctttg
    15181 cgtggcgata taccgaaagg ttatgataaa gcactatttt acgcctcaga tttagtcgct
    15241 ttattaaaat cagtagcaga tttcgatatt tccgtggctg cctaccctga agttcaccct
    15301 gaagcaaaat cagcacaggc agatttactt aacttgaaac gtaaaatcga tgcgggtgca
    15361 aaccacgtta ttacgcaatt cttttttgat gtagagagtt atttacgttt tcgtgatcgc
    15421 tgtgtttcta ttgggattga ttgtgaaatt gtgccgggta ttctgccggt gacaaatttc
    15481 aagcagttgc aaaaaatggc agcagtgact aatgttaaga tcccgacttg gatgggtaaa
    15541 atgtacgaag ggttagatga tgatcaaacc accagaaact tagttgcagc aagtattgca
    15601 atggatatgg tgaaagtgct ttctcgtgaa ggggtgaatg atttccactt ctatacctta
    15661 aatcgtagtg aactcactta tgcaatgtgc catactttag gcgtaagacc tgatttaaca
    15721 actgcataat cgaacattaa ggctgtatag ctaaatgagc tatacctcct tatagtttta
    15781 cttctcttca gccacccaaa tctcgccatt ttttaataat aaataggctt tgttggaatc
    15841 ggctttggtt tgtttaattc cagccggcag ggcggttggc aattcagtga tcttgcctgt
    15901 tttatccaac acaacaactt gttgatagcc catttggggt atcagtgcga aagtctctgt
    15961 tgtcgccact aaattggttt cgtgatcacc atagcggtga ttgcttaagc cggaggtaat
    16021 aaaacgttca gctaattggt ttcctttcag gctgtattca accaaattgc cttttagatg
    16081 tggcatttgg attgcataga gcttgcggtt aaagataaac ggcgattgcc aacggttagt
    16141 cgacagcggc tcactttcgg cttctattga taattttccg tctttaacgc caatcacaac
    16201 agtgctggcc ccattgccat cgccagagat aacagaaacg atcttggttt ttccattttc
    16261 tgtgaaagtc gcccagcggt tggcttcaaa tactcgccct tgttgggtga gtttttctgc
    16321 taaggggttt agggtatggc gttctagaaa ttgaatttcg cctgcctcta catcatcgcc
    16381 taatacaccg tgttgatatg taaaatcatc aggctttgca agtacagcaa tatgcccttg
    16441 gttaggtgtt tcggcatcaa aatcaatttg cagagggtga gcatcaggca acacctcggt
    16501 ttctgcggtg gcagtaatag tggcttggtt tccttgcgtt tcaattctgg ctaacttaaa
    16561 ttgtccgttt tgtttggtca cggcaatggt ggcaaaatta agggcggtca ttgtagcttt
    16621 cggggcaagg ggaatgttgg aggtatagat tttatcagcc gtccacagca taaaatgccc
    16681 gttttgatcc gctaacgcaa ttcgttggta ttgagcttta ggttcaatct cggtggaaac
    16741 tccatctgcc agtttttgag cttgttgtgt gactctccat aattgttttt gttggttaat
    16801 taccactaat tcgccttgtt ctgaaaggtc aaattggctt actttgccaa tttggggaag
    16861 tgggagtgga gaaagctgaa catcagcaaa caaagaagcg gagaacaagc ttaagattaa
    16921 cagaatagat tttttcatta gcgttaccta aaaagaagat ttaaatgata aagggagatg
    16981 ttatctccct ttacgcttta gcctttataa ccattcgggt tatttttttg ccaattccaa
    17041 gtgtctttca tcatttgttc tagcccacgc tcggtttccc aacccagttg ctctaacgct
    17101 ttttgtggag cggagtagca aacggcaata tcgcccgggc ggcgatctac cactttgtat
    17161 ggaatagtaa tgccatttgc ggcttcaaag gcttttacca tatctagcac cgaataacct
    17221 gttcctgtgc ctaaattgta aacgtggaaa ccggcatcat tttggtgctt gtctaaggct
    17281 tttaagtgac caagtgctaa atctaccacg tggatataat cacgcacacc tgtgccatcg
    17341 tgagtattat aatcgccacc aaacaccgat aattgaggta atttgcccac agccacttgg
    17401 ctgataaacg gcattaagtt atttgggata ccgtttggat cttcaccgat taaaccgctt
    17461 tcgtgagccc ctaccgggtt gaagtaacgc aatactaccg cacttaattg tgggaaggct
    17521 ttaacggtat cttcaagaat gcgttcaacc atatatttgg acgtaccgta agggttggtt
    17581 gtgccaccga cagggcaaga ttccacaatc gggataatct gcggatcacc ataaacggtc
    17641 gccgatgaac taaacacaat ggtattcaca ttggctttta gcatctcttc taccaataca
    17701 atcgagccgg ttacattgtt ttgatagtaa cgtagcggtt ctctgacgct ttcgcctaca
    17761 gcttttaaac cggcaaagtg aattaccgat tcaatctgat tttccgcaaa aattttgcgt
    17821 aaaatatcac gatctaaaat atcgccttga tagaatttta cgctcttgcc ggtgatctgc
    17881 ttcacacgct caagtgatac ttcagaggaa ttagaaagat tatctaacac cacgatttca
    17941 cgattttcgt ttaataattc aactaatgta tgtgaaccga tgtagcctgc accacctgta
    18001 actaaaattg ccattttatg ttcctctata aaattaatac gaaccaaggt tattgttgct
    18061 attttacccg atttaatcag gcttgctaat atttattcag tttataatgc cactccggct
    18121 tccggcagta attccggaat gccgttttta atcgggtaag caatattgag cttagggtta
    18181 attaatcggt tgttctcttt gtcccattct aatttttcat tagagacagg gcagacgagg
    18241 ttattgagta gtgtttcgtt catcttcttt tcctagtttt tgtagaatcg gggctaacaa
    18301 acaagcggtc gatttttctg aaaatgttgc agaaaccggt acataccacc aatttggctg
    18361 tgcaaaatcg tggcatttta ccgcatcttt ctcggtcatt aataacggcg tttggctatc
    18421 agcaaattga gccagctgag ccttatcaaa ggcttgatga tcggcaaagc cttgagtttt
    18481 ggcaagcgga atgcctaatt tttctaacat cgtaaaaaag cgtggtgggt gaccgatacc
    18541 ggcaatcgcc acacagggtt gggtaaattc gcttaatggc ttgcgttgat tggtgactaa
    18601 attaattgca tcagacggtt caagcgtcat taaatgctcg ttagcttgcg gtgtgccgcc
    18661 gttgcaaata accgcttgca cggagtttaa acggctcggt aattcacgca atccgcccgc
    18721 cggcagcaca aaaccgttac cgaaacgcct tacgccatca accaccaccc attccatatc
    18781 tcgctgtagg gcatagtgtt gcaagccatc atcggtgatg atgatgtccg gctcaaactg
    18841 atttaatagt aattcaatgc tttgttggcg gtttggagaa atagccaaag gcacattggt
    18901 tcgctgaaca atcagaaccg gttcatcacc caccatttca gcagaacttt ctcgggtaac
    18961 taattgcgga aacgttttcg ctttaccgcc atagcctcga gaaatcacgc ctacttttac
    19021 gccacgctgt tgcagttgtt ccaccagcca aacgaccact ggcgttttgc cgttgcctcc
    19081 aaccgagata ttaccgacta ccagcatagg caaaggcgaa cggtacgatt gcaaaatatt
    19141 cagagaatat aaccgcttgc gagcttgact aatcagccaa aacagcaacg aaagcggcga
    19201 aagcagccaa gtgataaggg attttgtttg ccagattttc atattattta tttttaagtg
    19261 tttcaactaa atctcgtaat aaggctaatt cacgtttttg gttttcgata atttcttctt
    19321 tatgggctaa taattcatct ttgtgggaga taataagttg taaacgttga atttcttcta
    19381 ctccatttcc taatgagata aatgaattag tgagattatt atctgtatta tttatgtaaa
    19441 tttttccttc ttccccatag gataataatt cgcaaatatc catattaaat acttctgcga
    19501 tttgttctat tttcggtaaa ttagagatag tttcaccacg ttctattttt gcataacctt
    19561 tggttgtcat acttaatttt tgagccattt catcttgtgt ccaatgatta ttttctcgca
    19621 gtaatttgat tttttcgtgt actttcatat aacacctata gattgtggga gttgggatat
    19681 aacttgatgt ggtaaaggat aaattttgtg gattgtagca gtttattgag caatttagaa
    19741 tagagtaaat tttatcttaa gctcacagga gaagaaacat tcatgaataa tcaatataat
    19801 ccattatatg gaatgctagg tattttagcg tcagctgcat cagtaatttt gcctctttat
    19861 gcagcatata aagactatca atttggggag aatatgttat ctcttatgga tataattatt
    19921 ttcccgttag gtattgttcg tggacttatg tatttatttg gatagattat gaaaaaatat
    19981 ttattttttg cttttatgac attaagtaat gttgcttatc ctaatttaga tgagtggtac
    20041 tcagcttcag ataaagagcg aagagaattt atcgcaaaac attttgcaga agaaacagta
    20101 agaagtgata gaaatacacc gtatgattat gctatgtgca ctggtagaat gtttgctaaa
    20161 caactgactc gagatgaagt caaagactac cctttggcaa acactaagcc gcaatattta
    20221 acccgtgata gacggattga gattatgtct aatttacctc gtgaaatatt acaaaattgt
    20281 gctaaataca tacagtaatt ttatgagtaa caccactttg gaattaagtg gtgttatttt
    20341 aattttaata atgtctctaa aatcatctcc aacataaact caataaagcc ggtagaatca
    20401 ttttggctgt ctgcgagaga aagcatttga taataacgtt gttgattttc gtaaaccatt
    20461 gtttcaatcg gcaaccaagc gaaaagtggg ttccattgtg ctaaaaggac attttgccat
    20521 aatcgaccca ttctgccgtt tccatcacta aaggggtgaa tcatttctat ttcatagtgc
    20581 ataaccgagc ttttaatgag tgcaggtgta tcatcttgtt tagcccaaga gaacaactca
    20641 ttaatcaaat tctctacgaa ttgaggacga gcccccatat gcacaagttg cccactgaaa
    20701 ttataaatgc cgacatcttt tgaacgaaaa gcccctgcgt catttactaa gtcagcagta
    20761 agaaacttat gtgctttgag aaaatcttta atcgagtaag gattatagtg catcatttca
    20821 tcgtaagcgt cataggcatt tttgacttca cgaatatctt tggggtgtcc gagaaccttt
    20881 ttgcccttaa tgattgcggt aacttgctca atcgttaatg aatttgcctc aatagctaaa
    20941 gaggcttgaa ttgatctcaa gcggttattt tttctaagat gtaaattacg ctcaaaatcc
    21001 aattgtagcg ttcccaattt atgagaaatt tctacaacca gattcagcat tttagtggta
    21061 actgtaaaag gtggtttata agccattttg caataatcct aaaaaattaa accgcttgtc
    21121 attgttactc caccttcggc ttatcgccgt tttcaacaca gcctttgccg atggtgactt
    21181 ttttcgcatt gagggttggg agatcgtaca ttgtgtcaag taataagttc tcgacaatag
    21241 aacgtaaccc acgagccccg gttttgcggc taatcgcttt ttgggcaatt gaaattaatg
    21301 catctttggt gaagtgcaat tcaacgcctt ccatttcgaa taaggcttga tattgcttga
    21361 tgatcgcatt tttcggctcg gttaagattt gaatcagagc ttcttcgtcc aattcttgca
    21421 gcggagtcac caccggtaaa cgcccgatta attcaggaat taagccgaat ttgactaaat
    21481 cttccggttc aacttgtttg aatagctcgg ttaaatcttg gcgatcttta tcttttttca
    21541 atgccgctgc aaaaccgata ccaccttgag tgttggtacg ggcttccacg attttatcta
    21601 aaccggcaaa agcaccgccg caaataaaga gaattttgga ggtgtccacc ggaatggttt
    21661 cgcctttcgg gtgtttgcga ccgccttgtg ggttaatgtt cgccaccgtg ccttcaagta
    21721 gttttaataa ggcttgttga acaccttcgc ccgatacatc acgggtaatg gatgcacttt
    21781 ccgatttacg ggtgattttg tcgatttcat caataaaaac aatgcctcgt tccgcttgtt
    21841 cggcttcaaa atcgcatttc attaataatt tttgaatcac gttttcgaca tcttctccca
    21901 catagcctgc ttgggtaagg gtagtagcat cagctaccgc aaaaggtacg tttaaacggc
    21961 gggcaagggt ttctgccaac aaggttttac cgctaccggt cggcccgatt aataaaatat
    22021 tacttttacc taactctacg ccattagtgg cttgatggtt tgacaatgca cttcttaagc
    22081 gtttgtagtg gttataaacg gccaccgaaa gcactttttt cgcgtgttct tgaccgatga
    22141 cataatcatc taaatgagcg tgtaattcgt gaggtgtcgg cacattggtg aaaaaactgc
    22201 cttcatcgtc ttggttttca tcaattaacg gctcttcttc accgtgtaat aaggcgtagg
    22261 attcctcgat acattcatta caaatatagc cttccgtgcc ttcgactaat tgatcgactt
    22321 cggtacgttt tttaccgcaa aaactacagt ggggttcttt ttcaaatgcc attacgccac
    22381 ctcactgcga gaagttaata ctttgtcgat taagccatac tcagcggctt cttccgcaga
    22441 cataaaatta tcacgctcgg tatcggctaa cactttttca tagctctgac cgctgtgttc
    22501 tgccatacgg cgggtaaggg tagctttcaa gcgtaaaatt tcttccgctt gaatttgaat
    22561 atcggttgct tgacctctcg ctccacctaa aggttggtga atcataatac gagcgtgcgg
    22621 cagagcaaag cgtttacctt ttgccccggc tgaaagcaaa aatgccccca ttgaagccgc
    22681 ttgccctgtg caaagggttg ctacatcggg tttgatgaag ttcattgtat cgtaaattgc
    22741 caagcctgct gttaccacgc cacccggtga gttaatgtat aaatagatgt ctttttccgg
    22801 atcttcggct tctaaaaaca gaagttgtgc cacaatcagg tttgccatat tgtcttccac
    22861 ctgaccgttt aaaaaaataa tacgttcttt taataaacgt gaataaatgt cgtaagaacg
    22921 ttcgcctttt gaggtctgtt ccaccaccat tgggactaat gccattttgt tttcctctgt
    22981 cgtaatacaa aatctcgcta ttctagcaaa ttttcagaaa atcattaaca acaagcggtc
    23041 agattgttaa aatcttttgc aaatgatgag gaaattatga cattaacaga aatttaccaa
    23101 aaatttgaac gttgtaaatc gtgggaagaa agataccgct tgttaattca gctaagtcgc
    23161 ttgttaccaa aaccaagtga gcaagagttg gcacaaatag cggaaattga gggctgtgaa
    23221 agccgtttat ggtttgaatt tcaagctgag ccacgaaaag tagtggcata tagcgatgcc
    23281 cgtttaatgc aggggatttt atttattgtg agtgtagctt taactgaaaa aacggcagaa
    23341 gagctgaaag gctttgactt aaaaacgatg tttgatgagc taaaaatttc acaaaattta
    23401 accagcacaa ggttaaatgg gttgggtcag ttacagaaac atataatgat gaatttgtaa
    23461 ttcaccctcg ccccttgtgg gagagggtga ataaaatccg caggatttta ttcgggagag
    23521 gggaatataa aaaacctctg atttctcaga ggcttaaatt tgttggcgga acggacggga
    23581 ctcgaacccg cgaccccctg cgtgacaggc aggtattcta accagctgaa ctaccgctcc
    23641 atactggtgc taaaataata gtggtttcct caacattgag caaatagttt ttgcaaaata
    23701 gtgtttaatt ggttgtaaaa taaccacttt atttctgctt gatcgccttg ataaacagca
    23761 acggcggacg gtgctgtaaa tctttaaatt cattgtgcca ccgaggttgg cctgccagca
    23821 ttggttcttc catttgcaca atctcaaacc cgccttgaat aaggttattc acaatggttg
    23881 ccattgtgcg gtggtaggtt ttaaagggtt gttgaaacca acttctgtcc cgttcgccct
    23941 cttcccgata atagttcaag cggtaagcaa cttgttgttt ttcttggttt ttctcccaac
    24001 gatagccttc tcggtaacag gtgacaatcg ggtgttcttg cgagaaaatc agcgtgccac
    24061 aagcagtcat tttttgcgaa atttttgcaa gtagttcgga aaaatcagca atataatgaa
    24121 acgcaaaaga gctggttact acatcgaaat cgccctcgct gatctcattt aatcgctcca
    24181 tcggcaggca gtaaagggaa aaatcgttgc ctttttgcca atgagcagaa agatcgcttt
    24241 ctgcctgttg tagcattaat tcagataaat ccaaccccac cactttttct gcaccgagcg
    24301 ttaaataatg ggctaaatga actcctgtgc cacaacctaa atccagcact tttttgccgg
    24361 ttaagtctgg cagtagagag aacattgttg gcttttccac cacttcattc atacttattg
    24421 gattttgtcg aagttgttgg taacgctcaa agaaaatcgg agtgtcgtaa atgctttttt
    24481 tcacttaata gcctttaaac aaatataaaa taaggcgggt taaaacccgc cactacgata
    24541 tgattagtaa gtcgataatt ttcgcaaagt ttctaacgct tttccactct caagcgtttc
    24601 ttttactttt tgcacattgg cttttaaatc atcttctcca aaggttttca ttaataatgc
    24661 gacatttgct gccaccgcat caatatgagc cagtttacct tttccttgta aaatagcggt
    24721 tactttttcg gcattttctg caggttcacc gcctttgaga tcttctaacg aatggcgttc
    24781 aatgccgaaa tcttccggcg ttaaggtgta atagtcgatc tgtccgtttt gaatttccgc
    24841 aacctgcgtt tcgccgtgaa cggcaacttc atctaaacct gcaccgtata ccacaatagt
    24901 gtgttcgtaa cctaaggctt ttacggtttc agcatagact ttcactaact caggggagta
    24961 cacaccgagt aattggcgtt tagcgtgagc cgggtttacc aacggcccta aaatattgaa
    25021 aatcgtgcgg gtttttaagg cttggcgaac aggggcggca tatttgaatc cgctgtggta
    25081 ggttggggca aacaaaaagc agatgttggt ttcatctaaa gcaaggcgtg ccgtttcagg
    25141 tgaaacgtca acattaatac ctaaatggct taatacatcg cttgagccgg ttttacttga
    25201 tacgctacgg ttgccgtgtt tggcaatttt atagcccatt gtggcggcaa caatcgcact
    25261 tgtggtagaa atgttgatgg tattatgccc atcgccacct gtgccgacaa tatccgcaaa
    25321 agggtaatca ggcgttgaga acggattggc attttcaagt gcggcttttg cagcacctgc
    25381 aatttcatca acggtttcgc cacgcagttt tagagcgatt aaggcagcag caagttgttc
    25441 atttgataca ttgcctttaa taacttcact aaaaaaacgg tgagattccg cttgggctaa
    25501 ggcttggttg gcgaataatt tatctaaaag tgcttgcata gtctcttcct ttttaattag
    25561 cgatgtgcct gatattccaa atcggttgcc tcgttgccgg tcattccacg aaagccccag
    25621 caatgctctg gctgttcttt aatggtgatt tcaacgtcca ttggcacaat gccgactttg
    25681 gtgtgtaagg cactaaatag tcctttaatt aagcgttttt tgagctgttc gctccgccct
    25741 tgcatcaggt ttatttcaat cacaataaaa tcttggctac ggttaattgg gggatagaaa
    25801 ttttccgcat ccaataagtc aaaacgcaaa gcgtggcgtt gttttggtac gccaaggctc
    25861 atttgcatac agtcaaaaat cacgtctgca atcagggctc tgcggtctgc taaggtttgt
    25921 tttaatccat atacactaat catttttttc tcctaataac cattccaccg actgcttaag
    25981 taattttgtg ccttgcacgg ttaaaatgga ttccgggtgg aactggaaac cgcaaatcgg
    26041 taaggttttg tggcgaattg ccatcacaat atgttcaaat ttcgcattaa cgataaattc
    26101 tgccggtaat tcatcgccca ttaatgagtg ataacgagcg acaagcattg gattgttaat
    26161 gcctgaaaac atcgcttggt tatcgtgttc aatacgagaa actttgccgt gcaatactgt
    26221 gccggtatgc actactttgc cgccaaaggc ctcaattaga gcttgatgtc ctaaacaaat
    26281 gccaatcatc ggtactttgt ctttcagacg gcgaataatt tccaataaat tgcctgcctc
    26341 agccggatta cccgggccgg gggaaagggc aaccaaacaa ttttcggtgg tttcagcttt
    26401 ggctaaaaaa tcctcaagcg gataatcatt gcggaaaatc gttacctgat gccctaattc
    26461 acgaaattga tcgaccaagt tataggtaaa agagtcgaaa ttatcaataa aaagaatatt
    26521 tgccatagtt tgtccttatg cttttgcatt cacctgccca atcgctttta acaccgcgcg
    26581 tgctttatgg cgtgtttcat ctgcctctaa ttgtggatcg gaatccagca cctcaccaca
    26641 accagcttgc acataggcaa tgccattttg aacaaaggcg gaacggatca cgatacaggt
    26701 atctaaattg ccgtctgagg ttaaatagcc caccgcaccg ccgtagctat ggcgtttttg
    26761 ttgctcgact tggtagatca gttgcattgc cttaattttc ggagcaccag ttagcgttcc
    26821 catattcata caagcttgat aagcgtgcag agcgtcaaga tcttttctaa gtgtgccgat
    26881 cacacgagaa actaagtgca taatttgcga atagcggtca atttgcatta aatcaaccac
    26941 acggcgagtg ccggattcgc tcacacgagc cacatcattg cgggcaagat cgactaacat
    27001 taaatgttcg gcaagctctt tttggtctaa acgcagttct aattccaaac gggaatctaa
    27061 ttcaggatcg atattacctt gttcatcaaa accgcgtggg cgagagccgg caatcgggta
    27121 aatttccaac tggcggttgg cttgcgaata tttcaacgca ctttcaggcg acgccccaaa
    27181 cagagtgaaa ttttcgccct gcatatagaa catatacggg cttggattgt tgattttgag
    27241 ctgtttatag ctggcaagag tattcgggca aggcaagctg aaacggcgag agggcacaat
    27301 ttggaacaca tcaccgatat taatatggtg tttgagtttg cggataatcg ctttgaaatc
    27361 ttcatcttca atattggcgg ttgcctcact cgttgcggtt tggttcgcta gaggcagctc
    27421 aatatgtgac agatttgcaa gtttttgcgt aaattcgacc gcttgttggt tcaaattggt
    27481 ttgttcattc ggttcaaaac agaaggtgtt tagcaccgca gtttcggttt ggtggtcgat
    27541 tgtaaccagt tgctctgcta aatagaaagt gtaatctggg caacttaagc catcatcttg
    27601 caggctgata ttttccatcg gaataaaatt tgccaccaaa tcgtagctaa ataatccgcc
    27661 caaatagata ggcgatgtgg aatcagcaaa cagttggctc accgttctta gcccgtcaaa
    27721 cacggtggtg gttttgagct tgctgtcttc atctaactgg ttgctgatgg ttgggaaaat
    27781 cgcttgcaag cggtcgtttt tgtctaaaaa tttgcaagtc ggagcagggt ttaacaggct
    27841 caatgcgttt gcaatcaaag gtaaaaccgc ttctccgttt ggggttaaag cgtggaaagt
    27901 cacggtttga tcttcacaga aaatatgcac tgccgatttc gcaaacagca aactttttac
    27961 actgttttta ctttgaattt ccgctgaatc taataatagc gtatgtgggc gttcgccgca
    28021 taatgcgtaa taaacacggg tcgtatcggc aaaatagggt aattctgttt gagtaatcgt
    28081 taattgaggc atagcaaatt cctattcaat ttttcgtact attaaactag tacattaaaa
    28141 agaagtcaag caattattcc agataattat gcgagcttgg gcgaacttgg tgtataatta
    28201 gcccaatttt tagaaagtcg aaggcttgag actatgacac aattttttta tatccacccc
    28261 gacaacccac agcaacgctt aattaaccaa gcggtagaga ttattcgaaa cggtggcgta
    28321 attgtttacc ctaccgattc aggctatgct ctcggttgtg caatgggcga taagcacgca
    28381 atggatagaa ttgtagcaat tcgtaaattg ccggaaaatc acaattttac cttagtttgt
    28441 agtgatttat ccgagctttc tatctacgcg ttggtcaata atcaagccta tcgcttaatt
    28501 aagaataata ccccgaatcc ttatactttt attctgccgg caactaagga acttcctcgc
    28561 aggctgatga caaagcgtaa aacagtgggg attcgtgtgc cggataatgc gatcgcattg
    28621 gcgttaattt ccgccttagg tgagccgatt ctttcttgct cgttaatgtt gccggagacg
    28681 gaaatgaccg agtcagaccc tgatgaaatt cgggatcatt tgcaaaatcg ggtggattta
    28741 attatccacg gtggttattt agggcagcag cctacaacgg tagttgactt aaccgatgac
    28801 gtgccggtta ttattcgaga aggatcgggc gatccaacat cgtttaatta aattgatgtt
    28861 gtatgattaa tatatagaat tatgcgtagg ggggctgtgc cagtccgtat taatatcgtt
    28921 atttggacag gcacaggacc tgtccctaca atgaaaatca aattcagacg cttgtgaaag
    28981 cgacaaaagg aaccttatga caacttttca aaaaaaatca actgcgactt tccgtgcaga
    29041 caaacgtggt gaaagccgtc cctcatttaa aaaagaagag caaaaatctg aacgcaaatt
    29101 tggtaaaacg tcagaaaaac caccacgtcc aacttctaag ccattaacgc aaagaattgc
    29161 aaaaaaagtg gaaaaaacga ccgctagtga agtggcatct caagagaaaa aagccaaagt
    29221 agtaggtgaa aagctacaaa aaatcttagc gcgagcaggg caaggttctc gccgtgaatt
    29281 agaagagatt atcgctgctg gacgagtgag cgtggacggt aaaatggcta ctcttggtga
    29341 tcgtgtgcag gttagctcat cgactaaaat ccgcattgac ggacatttag ttaatttaat
    29401 gccggcacaa aaagagatct gccgtgtatt aatgtattac aaaccggaag gggaactttg
    29461 cacccgttcc gatccggaag gacgatccac cgtatttgac cgcttgcctc gtttaagtgg
    29521 cgctcgttgg attgcggtcg ggcggttaga tattaacacc tcaggcttat tattgttcac
    29581 taccgatggc gaattagcca accgtttaat gcacccaagc cgtgaagtcg aacgtgaata
    29641 ttcggtgcgt gtgttcggca acattgacga tgcgatgtta caacgcttac gcaaaggcgt
    29701 tcagttggaa gacggaccgg caaactttaa acaaattaag gttgtgggtg gcacaggctt
    29761 gaaccaatgg tttgatgtga ctttaaccga agggcgtaac cgtgaggttc gccgcctgtg
    29821 ggaatcgcaa ggggtagaag tcagccgttt gattcgtatc cgttacggca atatcaaatt
    29881 agataaaggc ttacctcgtg gcggctggga agaaatgggc ttagaacaag tcaattactt
    29941 gcgtgagctg gtagggttac cgccggagac tgaaactaaa gtggaagtgg gggtaaaccg
    30001 ccgccgaacc aatatccgtc aaattcgtaa agcggtaaaa caacatcaaa aatatcgtgg
    30061 ctaaacacca tctttggggc tgcattagtt ctgctaatgc agctattttc tttcaaaaaa
    30121 ggagcattta tgtcttggga tattgttgca acattggcgg tcactgggat tgccgtattt
    30181 ttatttgcaa ctgaaaaaat gcgaatggac gtagttgcga ttttagtgct gtgttcatta
    30241 gtattattag ggcaggttga taccaaatct gctctgagtg gattttcaaa ctcagctact
    30301 gtaaccgtaa ctgcaatgtt tgtattagct gctggtttac aaaatagtgg tgctttagat
    30361 agtgtaggca gtttacttgc taaggtaaaa tctccttggt tattcttgct tgtactctgt
    30421 ggcgtaaatg ctgctgtttc tccttttgtg aataatacgg cagtggtcgc agtattaatt
    30481 ccgattgtga ttgccgcagc acagaatata aaaatggctc cttccaaagc ccttattccg
    30541 ttatcatttt cttctcaaat ggcaggtgtt tgtacactga tcggcacttc cactaatcta
    30601 ttagttaatg caatcgctca aaagcaaggg cattccggtt tcggtatgtt tgaatttgcc
    30661 cctttgggga ttattttttt agtggttggg gttgcctatt tattagtgac cagccgtttc
    30721 ttattacccg aatcacattt gcaacttgaa gatggtgagg ggtttggaaa atatgtttct
    30781 gaacttaaag taaataaaga ctctgtatta attggcaaaa gtacatttga atcaggatta
    30841 aatgaagaat ttaatctatt tactattggt gttttgcgtg atggggaaag attatcgaca
    30901 ccgagtcatc aagtattgca aaaacatgat attttattgt tgcggggtga atcggaaaat
    30961 ttagcaaaag tacgagaaaa atatggattg caccacgttg tgtatggacg ccgtgagaat
    31021 gatgaagata atctggatga agacttgatg gtggctgaag tgatgatttc tcctatttct
    31081 cgttggatag gagggactat tcctatttta caacagcgtt ggaataaaaa tgcaacggtg
    31141 ttaggcattc aacgccaaag taaagtaatt cgtgagcgtt tacgcaccac tgcttttaaa
    31201 atgggggata ttttattact cacattacca aaagaggata tggagacgtt acgccaagat
    31261 aaagacttta ttgtgttatc ttctgattta gtcaaaacgg aggaatcgtg gaaaagtaaa
    31321 tttgctttag gggtaatggt tttggtggtg gcaacagcag ccttaggctg ggttcctatt
    31381 tcagtgagtg ccttaattgg tgcagttgcg atgtgtgttg ctggttgttt aacggctgaa
    31441 gaagcctatc aatctattga ctggaaaatc attttagtct tagctggatt actgccatta
    31501 ggtgaagcga tggcaaatag tggggcggcg caatttattg ttgataacac gcttggtaaa
    31561 gtaggggagt tcgggccttt agtggtgtta gctgtattat atttactgac aatggtgtta
    31621 accgaattta tgagtaatgc agggactgcc gtgttgctta cgcctattgc ggtttctacc
    31681 gctaaaatgt taggggtaga tgcttcccca ttcattattg ccgtaatgtt tgcggctgcg
    31741 accagcttta tgacccctgt tggctatcaa accaacacga tggtatacgg tgcaggtggc
    31801 tataaattca cagattttat taaaattggt ttaccgctaa atgtaatcta ttggatttta
    31861 gggatagtat taattccgat tttcttccct tttaatccat aattgataga taattataga
    31921 aaaaaggttt acagatcaga aactctgtaa acctttttta ttcagcaata aatcaatttt
    31981 ctattggaaa attaccattg ataacccatg ccaatactac caccaaagtc gcctctggta
    32041 ttgctgttac cagttaattt atagataacc ttcccgttat ctgaaatccg agaataacct
    32101 actgcgattg cagcttcatt acggtatgta tctccagccg ttgctaacat acttttacct
    32161 ggtagatatg cttgcggtaa acctgcggtt gcagttgcac cagcaatacc agcgcgtaaa
    32221 cgtttatcaa ctttgtttac ttttgaatca atattattga tcttattatt gatatttttt
    32281 tctgttgctt ttaattggct aaagttaact gcatcagtat cttcagttcc tgcttttacg
    32341 ttagtcactt ttgttcctgc tgcattaata cctgttttag ttatactcgg tccccctaca
    32401 atagttaatc cattagtatc aatggttgta tcaccagtct taacagtatc ggctacagca
    32461 atgttagctg ttactgtttg agctgtgaca gaattaactt taatatcttt agctaattta
    32521 accgttaatg aaccattacc atttgaaata accccgatat tattatcagt tagttgtgat
    32581 tcgttagata ccccaccttt tactgtaaca gtagaaccta atttacgttg agatggcgtg
    32641 ccggtatcac ctgcaaatgt tagtgggctg gttactgcat catttaacgc agtaattgca
    32701 gagcctacat tattgaccgt tttactaact tcatttgtag gagcgccatc aaccacagta
    32761 tagcttgggg ctgaaacagc accatttgca tttacacttg aattaccacc taaagcggta
    32821 gcaatagtat ttgccgtatc gtaaagttgg ctaccattaa ctgcatctgc tgagataggt
    32881 gaaatatcac catcagctac attagttatt tttaatttgc cagcatcgac acctgtcatt
    32941 gtgacacttg ggccattatt aatggttaag ccgttgttat ttagttttga attaccaaca
    33001 gctacggagc cggcaggagt taaatcaatg tctttcgcta atttaactgt taatgtgtta
    33061 gcatctgttg ccactacacc gatattatta tcagtcaata tggttgcatc ggccccacct
    33121 ttaacattca gagaagtacc taatttacga acaatttcag taccagcatc atctacaaaa
    33181 gtaagtgctc cattacttaa ctcattcact ttcgtgttta aaccatcaat ttcggtataa
    33241 gcagcataaa gttgtgaacc gttgatagca tccgttgatg agtccaaaat acgacctgct
    33301 gcaacattcg ttaaagtacg ttcattgcct acagaaccaa tacttacagt tgagcttggc
    33361 gtagtacctg caaatgtgta tgtattgcca tttagcgttg cactttttgt tgcaactgtg
    33421 gctactgttt cagagttagt acctaatgca acagaacctt ggtgtgttgc ttttgcattt
    33481 tggccaagag ccactgcagc agttgttgtt gcttgtgatg aaacacctaa tgcaatagaa
    33541 gctacaccgg ctgcatttgc actattacct aaagcaatcg cagagctacc tgcagcattg
    33601 gcatttctac ccacagaagt tgaccatatt ccacctgcat tagcagagtt acctaaagcg
    33661 gttgactgtg tacccgaagc atttgcgtta tagcctgcag caagagaatc tgcaccgatt
    33721 gaacttgctt cataacctac agcggttgaa ttttcaccgg tagcttcaga tttagagcct
    33781 aatgcagttg cacgggtagc tgtcgctgtt gaagctgtac caatagctgt tgaggtatca
    33841 gcatttgcat tggctgcaga accaaccgcg agggcatttg ttgcatttgc attcgcattg
    33901 tagcctatag aagtggcatt cataccatca gctgttgcgc gaggaccaac tgcagttgta
    33961 cgttcaccgt ttgcttctgc ttcagagcct aatgcggttg ccagctcacc attagcactt
    34021 gttgcaacgc cgatagccat tggattaaca ccgctagagc ctgaattatc atagttagca
    34081 cgttgaatgc catcatctga aatactaaca taatgagttg caaatttgct gatagcttgt
    34141 ttgagttgac tgacattgac cgcatcagta tctacatcgc ctgcggcaac attggcgatt
    34201 ttattaccgc cattatctaa gccagattta gtaagactta ccggtttgtc tgcaacgccg
    34261 ttagcgatgg tgatacctgt attgttaaca acggtatcac ctgttgttaa tgaaccatta
    34321 gcgcctaagt taactttttc tgctaatttt atggttaaag tactattgcc atcagctaca
    34381 acaccaatat tattctcggt taatatgcct gtagatccgc ctttgatctt gactgttgaa
    34441 cctagatggc gctcaaaatt agttcctgta tcaccggcaa aggttaacgg actgatcacc
    34501 gctgtgttta atgcgcttag tgctgcagaa acagtagtgt atctcccttg tttgccttct
    34561 ttatctgcat ctggtgtgcc attcactaaa gcgtaggttg ggaaagtgat atttccattt
    34621 tcagtaacag ctgccccacc acctaagata tttgcggttg ttgcagcaac attacctata
    34681 gcttgttgtg ttaaatataa ttgtgaaccg tttatggtat ctgtagagct taaagatata
    34741 cgtcctgcag caacattggt gatagttctc tctttgcctt ccgccccaat acttactgta
    34801 gcaattggat ttgttccagc aaagtcacta tatgtaatac catttacagt tgcatttgta
    34861 gttggtatgg ctatagctgt aactgagttg ctacctagcg ctatcgaatc ggtatgttca
    34921 gcagtggcat ttcgacctat agcggttgca ttaaaggcgg aagcatttga tgattctccg
    34981 attgcaattg tgcgttgatt tgttgcttta gcgcttaccc ctagtgcaac agaagccgcg
    35041 cctgatgcag tagcacgatt gcctaaagcg gttgcagaac ctccacttgc attggcttca
    35101 cgaccaaatg cagaagcata atcgctggtt gcacccgcat tagtaccaac agcagtagtt
    35161 aaatttgctg ttgcatttgc ataataacct aatgaggttg caccgtggcc tgaagtcttc
    35221 gcttcataac caattgctgt tgagttatcg ccatttgctt gagattttgc accaattgct
    35281 gtggagtgaa tagctgttgc gttagcttca gcaccatagg cggagctaac aataccagtt
    35341 gcattggcat gactacctac agcagttgct tttcctatta ccgtttctcc tgttgctgct
    35401 gtagttttgt aattattaac accatttgca agagcggaat taccgatggc gatattatca
    35461 tcactggtta catttgtagt aggtcctgct agttttgcat tagcataagt accaattgca
    35521 atattgtggc taccactagt accgtctcca gcagtattac caatagaaat cgtattgttt
    35581 cctgttacat tagagctagc cgaataacca ataccaatat tgtattctgt gctgttagag
    35641 tgatttaatc cggcatgatc gccaataaaa acttcacgta agcccattgc ggttgcattg
    35701 taccctactg ctacggaacg tttatcggca gtggcttgcc caccaacagc tgttgaagca
    35761 aaactagcgt tagcaaagcc tcctaatgca gttgaaaaat cggctgtcgc ggttgtgtta
    35821 taccctaatg ctgtagaaac tttaccgcta tttccttcta agcctgttat tgtgcttact
    35881 agtgttgagt taactttaga tccatcacca attgcgatag atgtttgtgg gttattatct
    35941 ggtatggtcc cataggttgg tgaataggtt gcagcacttg caaaacctgc agaaagcgca
    36001 agacttagtg tgctgagttt aataatatta gtggttagtg atgtatttgt tgcattagat
    36061 ttattagcac ttcttgataa ttcagaagca acaatccaag ttcgttttgc atggttccaa
    36121 acaatgcgat aaattttatt catagaacta ctcctgttct tattttttaa taattttaat
    36181 gatttgagta ttgcctagcc aaatatatac aataggctga aaaattatat aggtgaggtt
    36241 ttatggtgta aatagtggct ttttaggaat aaatatagca attttttgat ataaatgtat
    36301 tattttaaat tttatgtttt gtactaatat tgaggtggag tgcagagttt tatttggttt
    36361 ttggtatgtt ttttagtttt aaaaaacact gatttagtta aatgccaatt aaatataggt
    36421 ttattaatat aataaatgtt tcgtatattt atcaaaaggt actctgtatt ttgatttctt
    36481 aatttaaata acttagaatt tgaaaagaat acttcacttt atatggagga aatatgggct
    36541 gttcatcttt ttcaactaag ttaaaacaag agttttttag tggttggact acttttgagg
    36601 caagttggtt gattgttttt ttagcgattc aaatcggtat ttttatttat caacccgata
    36661 cttggattgc aactattgcg gcaataacag gtattttatg cgtggtattt gtcggtaaag
    36721 gaaaaatcag taactatcta ttcggcttaa tttccgtttc gctttatgct tatatctctt
    36781 atacctttca gttatatggt gaaatgatgc tgaatttact tgtatatgtg ccggtgcagt
    36841 ttatcggttt ctatttctgg cgtaaaaata tgaccagcga aaacacggta aataatgctg
    36901 gtgtggaaga ggtaattgct aaagctttaa ccgcaaaaca gtgggtgatt gtcgccatta
    36961 ccaccattat cggcacattt ctttatattg aattgcttaa atatttaggc agtgcgttag
    37021 ctatattaga tggtgcaaca gtggttattt cgattgtggc acaaattttg atggtacttc
    37081 gctaccgtga gcaatgggca ttgtggatta tcgtgaatat tatgaccatt tctttatgga
    37141 cggcaatgta cttccaaaac ggcgaaacca gcttgccgct gttggtgatg tatgtgatgt
    37201 atttatgtaa ctctatttac ggttattaca actggattaa acttcacaga aaacatcagc
    37261 aatagagcga ataaatacaa attacaagcg gtcatttttt gtaaaaattt acctaaaaat
    37321 gaccgcttgt tattatcctt tacgaatttc gtttatatct tttagcagtt gttgaatatc
    37381 tttatttgca aaaatctgct cggtggttgc ggataatttt cttctccagt tagggtattc
    37441 ggtgctggtt cccggaatgt tcaccggctc taacatattg agccaatctt cgggctgtgt
    37501 accgaataat gcactgtgag tgtgagccac atagcgttgt aattggtggg taaattttat
    37561 tgttactccc acttcatttg gctcgagtgc tatcactttt tccaccgcat tacggatatt
    37621 caagcggtcg tacgaacgct cttctttcag ctttctcaat acggctttgc ttgggtaagt
    37681 gtcaaatttt tcgcctagct caaaatcata gcctttccaa tagccttgaa tagtcggtaa
    37741 atcgtgggtg cttagagttg tcatcgcttg gtaaggataa ttttccagcg gtttaaacgc
    37801 gttttctgcc ttttcaaaat aaaaaacatt gtaggcaaaa atgccctttt gctcgagaga
    37861 gtccaaaatg ccttcaggca caatgccaag tgcctctgca atcactaaac attggtgacg
    37921 ttggctttct aatgccaaaa tagagagcaa atcttcgagc ggataacgga cataaatccc
    37981 ttcttttgcc gattcaccgt tcgccaccca ccacatacgg gcgaagccga gaatatggtc
    38041 gattcgcaat gccccacaat gtttcatatt agcacgcact aaatcaataa acggctgata
    38101 acctcggctt tgtagaatat gcgggtgcat tggcgaaagt ccccagctct gtccgttcgg
    38161 ggcaagcata tcaggtggtg caccgattga cgcctcttgc acaaataggg ctttatccgc
    38221 ccaagtttcc gctccgcttt gagtaacacc aacggctaaa tcgcggtaaa aaccaatcgg
    38281 cattgaaagt gattgagcaa accggttgca ttctgctaat tgctggtttg ccacaaattg
    38341 caaccacata taaaaacgta tctgcgttgc ctgcgatatt tgaaattcag ctactttagg
    38401 cgaatagtaa ctttgatatt cctccgccca gtttgtccag ccgccttttt cgccaaattc
    38461 agatgaaatc cagtggtgca aagcatcgaa cgttgcttgg atttttaatg gctcgcctgc
    38521 ttgctcaata aaggcatcga acgctgtttg cgattgttgt tgagatgact gtgaaaaatg
    38581 ctcaaaagca aactgcagag cctttaattt cagttgcgct acttggctgt aatcgacaaa
    38641 atctttggct cgcaattcgg caagttgctg ttgagtttct ttggtgtgaa accattgttg
    38701 agcctgttca gattgttgaa aggcttctac tgctgaaaca tcaatataaa taatattttg
    38761 ccaaagtcga aaggacgggc tgtaagggct tgccgcatca ggatctgccg gaaagagggc
    38821 gtgaataggg tttaagccca caaaatctgc accataatca gaaatgttgg caaggaattg
    38881 tttgagatcg ccaaaatcgc caattcccca gttgttatcg gaacgcaaag tataaagctg
    38941 taaaaatgca ccccagagct ttttcctttc ttccaatggc ttaggctgga aagctttcgg
    39001 cggtgttaca atcagcgagc aagattcttc atcattttca gttgaaatag aaagctgatg
    39061 atagcctaaa ggcaaatcgg caggcagggt tagaactgat tgctctgcct taatttcacc
    39121 gttccgaacc tcaccatttt caagcacaat ttgccacttt gctacatttg taaaattcag
    39181 cgaaatttcg accgcttgtt gctcggcatt tggctgagta atcactttaa caagcggtag
    39241 aatttgatta tttttttgca aatcgttatc ggtatttaaa agccgctcta ttttctcaaa
    39301 agcagagggg ctggcatact ctttaatatt tggggagtaa aaatagtgag ctgtattttg
    39361 tttgtttgac attatgactt ttttccttta ctgtatttgt taaaataacg atcttgtgaa
    39421 gattaatatg agtaagaaga gtaggcaaca ggtttgtctt tgtgatatga tgttaaaaaa
    39481 atttaattta actctaaagg gttatgtttt attattaaat ataccatttt tgtttttatt
    39541 aatatcctgt gctgtgcttt tttctgattt g
//
LOCUS       DANLZQ010000014        34757 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.014, whole genome shotgun sequence.
ACCESSION   DANLZQ010000014 DANLZQ010000000
VERSION     DANLZQ010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 34757)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34757)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34757
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.014"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(199..1074)
                     /gene="ubiA"
                     /locus_tag="PXE50_000636"
     CDS             complement(199..1074)
                     /gene="ubiA"
                     /locus_tag="PXE50_000636"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HDL5621570.1"
                     /translation="MNNETLFSKQKWIAYAQLMRFDKPIGTLLLLHPTLWALFIAAEG
                     MPPVAILAIFTLGVIVMRAAGCVINDYADREIDGHVKRTSQRPLATGRVTTTEAKVIF
                     AILLLFAFLLDLMLNRYAFLLSFVAVFLAVIYPFMKRFTHLPQVVLGMAFGWSIPMAF
                     GAVTETLPLECWLLFFANLAWTVAYDTQYAMVDRDDDLRIGVKSTAILFAQYDNKIIA
                     LLQFITLILLGLLGVVKDYHIGYFVVLALSATLFIYQCWLTKKRERSECFKAFLNNHY
                     FGLGVFVAILVGIYF"
     gene            complement(1067..1828)
                     /locus_tag="PXE50_000637"
     CDS             complement(1067..1828)
                     /locus_tag="PXE50_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR family transcriptional regulator"
                     /protein_id="HDL5621571.1"
                     /translation="MKQANRHKKIIELVNQLGYVSTEQLVAELNVSPQTIRRDLNEMA
                     ENNLIRRHHGGAAAPSNTENSDYTHRKQFFSHEKNAIAQQVAKLIPNGASLFLDIGTT
                     SEAVALALLSHKNLKVVTNNLNAAHILMQNEDCQITVAGGGLRSDGGLIGEETVRFIN
                     QFRLDFGILGISAVDMDGSMLDYDYHEVQVKRALMECSRQVVLVTDHSKFTRTAIARL
                     GNVKEVNYLFTDQDLPLELQTHLSQSDVIVKICNE"
     gene            complement(1895..3262)
                     /gene="purB"
                     /locus_tag="PXE50_000638"
     CDS             complement(1895..3262)
                     /gene="purB"
                     /locus_tag="PXE50_000638"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HDL5621572.1"
                     /translation="MELTALTALSPIDGRYQDKVASLRPIFSEFGLLKFRVTVEVRWL
                     QKLASHTQINEVPVFSEKANDYLNQIVADFSLEDANRIKTIERTTNHDVKAVEYFLKE
                     KCEALPELQAVNEFIHFACTSEDINNTSHALMLKTAREEVLLPEWKKVIDAVAELAKC
                     YQHIPLLSRTHGQPASPTTMGKEMANVAYRLQRQYKQLENLEILAKINGAVGNYNAHL
                     SAYPEIDWHTFSQEFVESLGVTWNPYTTQIEPHDYIAEFFDCVARFNTILIDFDRDMW
                     GYIALNHFKQRTIAGEIGSSTMPHKVNPIDFENSEGNLGLANAVMAHLGQKLPISRWQ
                     RDLTDSTVLRNLGVGLGYALIAYASTLKGISKLEVNEQHLRDELNQNWEVLAEPIQTV
                     MRRYGIEKPYEKLKELTRGKRVDETAMREFIDKLEIPENEKNRLKEMTPASYIGYAVE
                     LVDKL"
     gene            complement(3296..3925)
                     /gene="hflD"
                     /locus_tag="PXE50_000639"
     CDS             complement(3296..3925)
                     /gene="hflD"
                     /locus_tag="PXE50_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high frequency lysogenization protein HflD"
                     /protein_id="HDL5621573.1"
                     /translation="MADYHDITLAYAGVCQAATLVQQFAHKGMADREAFKCALESLLI
                     TQPESTLSVFGDDLSHLKMGLETALAQTGGGNGKLDTEVGRYWISLLALSQKLNKNPE
                     AKQQLAQRLQQVERQLALYEDNVMADQMIANLAAIYSDIISPLGTKIHVMGMQDYLVR
                     PDIQNKIRASLLAGIRAGILWQQVGGSRWQFLFSRKKIFNQAQKFYRQI"
     gene            complement(4057..5721)
                     /gene="cydC"
                     /locus_tag="PXE50_000640"
     CDS             complement(4057..5721)
                     /gene="cydC"
                     /locus_tag="PXE50_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/glutathione ABC transporter ATP-binding
                     protein/permease CydC"
                     /protein_id="HDL5621574.1"
                     /translation="MKSLFPFFALYQTHFGRLLLGVVLAILGLAASIGLLSLSGWFLA
                     ASFLAGNALIFNFFYPSSGVRGLAVGRTISRYFERLVTHDATFRVLANLRASVFKKLI
                     PLSPSGLNRFRNSELLNRLVADVDTLDTLYLNLVSPFVSAVMIIAFMAIGLSFVSVPL
                     MLIICGTLLVLLAVIPTVFYRLGLKLGRNAIQSRANYRSQFIEWVQLNAEFLLFGNLN
                     QMSEKLQQTEQQWLNAQSKESRLSGLSNSLIMLSNGILTCVVIYLVSTSINVPTAKYP
                     EALIALVIFCVMASAEILSPIGIAFLHLGQVITAAERISEITEQQPNVTFGSKAEWQN
                     LSQNQPLVRCENVSFAYYGEQNVLNNLSFKVLKGQKVAILGKTGSGKSTIFQLLNRNY
                     DPTSGQIWLNNCKIDEYSEPMLRSKLVTLSQRVHIFSQTLKDNLLMGNAQATDEQMQE
                     AVRKVGLGHLLETDGLNLWLGEGGRPLSGGEQRRLGLARLLLSSAELVLLDEPTEGLD
                     RETEQQILNLILTHCCDRTLIMITHRQSGLDKFDVVYRIDNGRLVG"
     gene            complement(5721..7487)
                     /gene="cydD"
                     /locus_tag="PXE50_000641"
     CDS             complement(5721..7487)
                     /gene="cydD"
                     /locus_tag="PXE50_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/glutathione ABC transporter
                     permease/ATP-binding protein CydD"
                     /protein_id="HDL5621575.1"
                     /translation="MEKQRQRELQKWLKSQQKVIKKYMHLNILLGSFSSLCMIGQMWL
                     IATMLDKMLIGKQSPNSFLVEIMLLFCCFAARAFFIFLRERVGFKAGQTLRLHLRRQI
                     LAKMEAVGPMSIQQKPAGSWATLMLEQVENLHNFYARYLPQQFLSLIVPLLILCFVFP
                     INWAAGAILFATMPLLPLFMILAGMKAVEANQRNIGILSRISGQFLDKLKGLETIRLF
                     GQAEKQTEQIYQSTEDFRISTMDVLKMAFLSSAVLEFFTAVSIAVTAVYFGFIFLGEL
                     DFGYYGTGVTLFIGFFCLMVAPEFYQPMRELGVFYHDKAAAISAADNIETFLKEKVKT
                     QGGNLQENVENQPLVIQAKDCVIFSPQGKALTQALNFELNAHQHIALVGQSGAGKSSL
                     MNMLLGFLPYEGSVTINGTELRDLNLSQWRAKLAWVGQNPQLMHGSLKENILIGNPNA
                     TDSELAKALQLSKADEFVARLGLEHQVQDSNIGISGGQAQRIAIARALLRPYELLLLD
                     EPTASLDMDSEQQVLAALHNLSREQTTLMITHRVEDLTQCDEIWVMKQGQIIQKGRFT
                     ELEHTGFFAELIHNELVHQGEI"
     gene            complement(7602..11699)
                     /locus_tag="PXE50_000642"
     CDS             complement(7602..11699)
                     /locus_tag="PXE50_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB"
                     /protein_id="HDL5621576.1"
                     /translation="MTDENKQTATNQTDSAQEPQATQPKKSKWRFLKHGFCLTFILLL
                     LAILFLCTGYGQRKVLSWVDKFVEPLQLGQVQGSLQDGLQLSDARFVMDGVNVTVGQA
                     DLHIGFSCLLHYEMCLNNLSLKDTEVLIDTTKLPPSQPKEETEPFTELNLPLGISAQN
                     INLENIKVKVDDMDIHLNHFHTALSGKGRAITVHPTQLEGLNLLLALKLDETDTEQAV
                     DFAQKNAKTEALSATNPQEIADKVIQEAVEKTSEKVVEGFHQLQRKTVAQAEQVDNKV
                     DWAAIKAQLAQPLLDKNIRFSLPLDLNIEQIDIANVAIAQKAKDEKGNLIEPISLLNV
                     ASLQLQAQAKDQHINLKSLDFKSDQGDLTASGSLSLQDNYPLSWTLSGHEAKTAKVKL
                     PFNQIEASLSGELYDKTSLKVKTAGAISASLEGNVALAQAKTPFDLSLKSESMRYPFA
                     PQQNGDVLSLENIAMRLNGNLLDYALEAKVSAKGMGVPASSASLTGKGELTHFNIQDL
                     SLNTLEGTAKIDGLVDWSEGVAWRSNLKLQHINTKSLLADWPAVLSGSLSSEGYAGRG
                     NSASGWKADVSNIDIKGSLLQKNLHLSGNLKADHQQLLDVPGLSLVYGENKIDLKGVL
                     GEKSDFYADIKAPNLQGLVPNLKASVNGNAKLSGKVSEPNIDLDLVASNVGYEQFKLQ
                     NLTAKGKITTEKTIQGDLTLGLRQFAYNEIKVGNATLLLKGNEENHSLKLSAKGNPVG
                     ADLQISGKFDRLKEIWEGQLSQVSIQSTEFGQFQADKAVNVKYDNKAINANISAHCWH
                     NRKINLCFPTAFNAGVEGKVPFEIRNFDLAVLQQFLEKNSQLSGIVNAKGDAAWFKNK
                     QPQVNLDLTSNAIKFIQKMEGGKSFPLTVSPLKIDLKMSDNNLTLKSDLRVENNGRLS
                     TDLVMKDLSKARALSGNIHLDQLSLKLIRPLLERGDSVDGNVNARLTVSGTATSPLLH
                     GNLNVTELKARSVTMPFDITGGNLAMNFHGATSTLSGKLQTKQSELRLEGDADWRDLN
                     AWKTRVHAQANRFQVDIPNIAKVAVSPDIQVTATPTLLTLSGNVDIPWARIEVEQLPE
                     SAVSVSGDEVIMDGSVKNKVPFSQRNIPAQTSGGMAINADIKINIGNDVKLKAYGLNS
                     NVNGLLSVRQGKQGLGLYGQVHLREGRFAAYGQDLLIRKGDISFAGSPSQPTLDIEAI
                     RNPEAMEDPTITAGVRVTGLADNPTVKVFSDPAMSQNEALSYILTGRSLESSGDTSSS
                     NAVAAALLSMSLSKSSKLVGDVGSTFGLKDLSVTTAGIGDNTKVEVSASLAPKFRVKY
                     GVGIFAPLTELTLRYNLTPRLYLQWVSSINQAVDLMYRFEFDELF"
     gene            complement(11780..13615)
                     /locus_tag="PXE50_000643"
     CDS             complement(11780..13615)
                     /locus_tag="PXE50_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor"
                     /protein_id="HDL5621577.1"
                     /translation="MNTKLHFLTFCCLVAFASMAQANQEQRLSDVDRERVENLQEKLA
                     EDSDDEPEIEPLVTLEVKGIQGKDAKKNVELYLDQIANEYADGSERYQYLVQTTVDKA
                     LRALGYYNSRYQFVQLPQEGKKPLLVLNVELDKETVKIDETDIVLQGDAKTDEDFAHL
                     VSKAPKQGSRLNHKTYDNFKGDIESTAFSKGYFDGHWLYHRLEVYPTDHKADWRLGYD
                     SGKRYHYGQIRFVDSQIKEEYLQNILKIHSGEPYLANDLSILTQDYLSSNWFSSVMVE
                     PHLNEQDKLVDLNVLFQPKKRNEVEIGIGYETEVGPRLQLNWKKPWLNSRGHSIESRT
                     YVSKPEQTFEFGYNIPLREDPLHYYYQLSGTLENEDQNDTKSTAATLGLQRFWTHETG
                     WSFSVGLKARYDSFTQANDRFKTLLVYPTASLNRTRTDGKPYPLWGDTQKLTVNWGSR
                     AVGSDVNFYSYKASTSWARTYFDNHRFYLRAELGYLKANQFERIPPALRYFAGGDMSV
                     RGFGYKDISPRDPSNGKRVGGSHLATGTVEYQYQVYPNWWGAIFYDAGLASNKFKTQD
                     LYYGTGLGVRWASPIGAIKFDVATPVKSPDNSKGIQIYIGLGSDL"
     gene            complement(13627..14472)
                     /locus_tag="PXE50_000644"
     CDS             complement(13627..14472)
                     /locus_tag="PXE50_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HDL5621578.1"
                     /translation="MFKQINKRLNFNIFLQMFVLFTPLVQAAQMAIVIDDVGYRIKED
                     REILALPKAVSVAIIPVAPYATERAKDAYNQKRDILIHLPMEPKSKQPIEEGGIHIGD
                     NEEKIRKLIHTSRGQVPYAIGLNNHMGSGATSDSATMQHLLKVLKENTLFFLDSKTIG
                     SSVAAKTARQFGINTLERDIFLDDSDLLADVQKQFAHAINHARKNGVAVVIGHPRKNT
                     ISVLKQNLAQLPQDIELVSVGNLWRNEKTVPDKPFIMLFEQEPALSSVPPYDSIPLLR
                     GIPKE"
     gene            complement(14473..15636)
                     /locus_tag="PXE50_000645"
     CDS             complement(14473..15636)
                     /locus_tag="PXE50_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDL5621579.1"
                     /translation="MLVKRINSYCWTAIFSGVISFSTPFSFANNLNQIQQKIQQQTSK
                     INEQKQKRNALQSTLKNQEVEMGKVLDKLQKTEMSLTEVRQTIKATETEIARLEKLEK
                     QQKEKLKEQLDSAYRSGVNPSVLERLMSEEAKNAERMTAYYQHMNNIRIDAIVEIRKT
                     QADLKARRDELKGQQKDHQTQLNEQKKQEKDLKKVQSQRESTLRLIDKTLEQDQSRLE
                     NLRSNEQALKQQLEQAQREAQQAEKREQQREKQAKSGQSKTTENVERTPIKAGRYTMP
                     VSGNIITPFGNNWHGVVIGASAGTSVRAMASGRVIMAQWLAGYGNMVAIDHGNGDISL
                     YGYNQSISVSKGSRVQGGQVIAKVGNSGGQSRSALYFGVTRKGTPINPLNLVK"
     gene            15804..16487
                     /locus_tag="PXE50_000646"
     CDS             15804..16487
                     /locus_tag="PXE50_000646"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011201466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HDL5621580.1"
                     /translation="MQLVFIRHGFSEWNAKNLFTGWRDVNLTERGIEEAKSAGQKLKA
                     AGFEFDIAFTSVLTRAIKTCNIVLEESDQLWIPQVKNWRLNERHYGALQGLDKKETAE
                     KYGDEQVHIWRRSYDISPPDLDPQDPNSAHNDRRYANLPKDLIPNAENLKITLERVLP
                     FWEDHIAPALISGKRVLVTAHGNSLRALAKHIEGISDADIMDLEIPTGQPLVYELDDN
                     LKVISKRYL"
     gene            complement(16624..17181)
                     /gene="frr"
                     /locus_tag="PXE50_000647"
     CDS             complement(16624..17181)
                     /gene="frr"
                     /locus_tag="PXE50_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HDL5621581.1"
                     /translation="MINEIKKDTQDRMEKSLEALKGHIAKIRTGRAQPSLLDGIQVEY
                     YGSATPLRQVANVVAEDARTLAVNVFDKSLISAVEKAILTSDLGLNPSSAGTTIRVPL
                     PPLTEERRRDLIKIVKAEGEQGKVAIRNVRRDANDQIKALLKDKEISENEQHKAEEDI
                     QKITDTFIKKVDEVLAAKEKELLDF"
     gene            complement(17233..17949)
                     /gene="pyrH"
                     /locus_tag="PXE50_000648"
     CDS             complement(17233..17949)
                     /gene="pyrH"
                     /locus_tag="PXE50_000648"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HDL5621582.1"
                     /translation="MSKPIYKRILLKLSGEALQGSEGFGIDPSILDRMALEIKELLAE
                     GVEVGVVLGGGNLFRGAKLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAEVNAKLM
                     SAFQLNGICDTYNWSEAIKMLREKRVVIFSAGTGSPFFTTDSAACLRGIEIEADVVLK
                     ATKVDGVYDKDPAKYADAKLYNKLTYAQVIEQELQVMDLAAFTLARDHGMPIRVFNMG
                     KPGALRNVVFGTEEGTTISE"
     gene            18041..19603
                     /locus_tag="PXE50_000649"
     CDS             18041..19603
                     /locus_tag="PXE50_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HDL5621583.1"
                     /translation="MKSKQLFGILVAISLATAASCLMLIGSGFFPNPSIFEVILGVFL
                     IIALASSKWTYYLLLLPISIAYAIYTPVGIKFGKPTYEYIASIFATDMMESKEFIAQL
                     PILNIAAGIAIVLAVIFYRKITNRYQIRFLRNKTFVISAFVLMLFSLAPFKFFQEFYN
                     SSLKVKKELEVLNNLTLDSQWGQSTLSSTSNYDDYVLIMGESARKDYHHAYGYPAANT
                     PFMSSAKGTLIDGLTSGGTNTIASLRLMLTKPDTEKWEANYGLTLIDLIKSTGIKTYW
                     ISNQGYLGNYDTPISSIGNKSDVKIFTKAGDSLNTNVSDFELLPHFAKVIEEPAQGKR
                     FIFLHLYGSHPITCDRLTDYPKMFDDDKLPKRYFNVNCYVSSIKKTDELLKRVYDLLV
                     KNQENHQRSFSMVYLSDHGLSHEVSKENIVIHNGKDRSKLHYDIPLFKISSDDTQRNE
                     YKAFKSGLNFTNGIANWIGIENPLLDKEINLFNEQNDKSDYGLKKIIETQSTVEDPAV
                     PIPESYLYKATN"
     gene            complement(19667..20518)
                     /gene="tsf"
                     /locus_tag="PXE50_000650"
     CDS             complement(19667..20518)
                     /gene="tsf"
                     /locus_tag="PXE50_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HDL5621584.1"
                     /translation="MAEITASLVKELRERTGAGMMECKKALVEANGDIELAIDNMRKS
                     GQAKAAKKAGRVAAEGVILARVASGFGVLVEMNCETDFVAKDAGFLELANEVADFAVA
                     NKGTTIEALQAQFEEKRAALVAKIGENMNIRRVQYLEGEVIAQYLHGAKIGVLVAGAG
                     SEDELKKVAMHVAASKPEFVNPEDVSADVVAKEREIQIEIAMNSGKPKEIAEKMVEGR
                     MAKFTGEVSLTGQPFVMDPSQSVGQYLKSVNTSVSNFIRLEVGEGIEKVEEDFAAEVA
                     KITGGNA"
     gene            complement(20614..21333)
                     /gene="rpsB"
                     /locus_tag="PXE50_000651"
     CDS             complement(20614..21333)
                     /gene="rpsB"
                     /locus_tag="PXE50_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005645552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HDL5621585.1"
                     /translation="MAQVSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLE
                     KTLPLFNEALAELTRIASNNGKVLFVGTKRAASDAVKAAAVESQQFYVNHRWLGGMLT
                     NWKTVRQSIKRLKDLETQTQDGTFDKITKKEALMRTRELEKLELSLGGIKDMNGLPDA
                     IFVIGADHEHIAIKEANNLGIPVFAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDSAV
                     AAIKEGRGVETVEVAEEASAE"
     gene            21678..22706
                     /locus_tag="PXE50_000652"
     CDS             21678..22706
                     /locus_tag="PXE50_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL5621586.1"
                     /translation="MKKTLSALAIAAATFTSTSTLAANEVNVYSYRQPYLIEPMLKNF
                     EKDTGIKVNIIFADKGLVDRVKQEGELSPADVLLTVDISRVMEIVNADLAQKIDSKVL
                     EKNIPAQFRDSNDQWFGLTTRARVIYTSKDRVGKLPAGFDYLDLAKPEYKGKVCVRSG
                     KNSYNVSLFAAMIEHYGIEKTKAFLEGLKANLARKPQGGDRDQVKAIKEGICDYSIGN
                     SYYYGKMLDDEKQKSWAEAAIINFPSGEHGTHKNISGVVIAKHSPNKANAVKLIEYLS
                     GEKAQGLYAELNHEYPVKEGIEPSAIVKGWGTFKSDTIKLEDIAKNYEAALKLVDEVK
                     FDDFSEKK"
     gene            22829..24475
                     /locus_tag="PXE50_000653"
     CDS             22829..24475
                     /locus_tag="PXE50_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDL5621587.1"
                     /translation="MRSQFCWKSIAALTTFIVLLPLIAICYHALQGDNENLAHLWQTM
                     LPIYLKNSTLLVLGTVFLALIFALPTAWIVANYRFWGQRTLQWLLCLPLAMPAYLIAY
                     LYTDLLDYSGAFQGWLRSIFGWTHPQDYWFPQIRTLYGACFVLALVLYPYIFLLVRVA
                     LLEQSENLTHSAKMLGASPSQLFRRITLPLIRPSVAVGIALVAMETLGDFGTVAYFAV
                     PTLTTAIYDSWLGYHDLGTASQIAIFMLLMIFLFLSLEQYSRRKQKSYQRGYEKKSAF
                     KFLTGWKLALALAWCWGLLALAFFIPFGRLLYWAYDYFEQAWNLDFVQFSLNSLKVSI
                     IASVITVLIALLLHFSKRLNTRKILVKNDRLSLQLASLGYAVPGTVLAIGLLSPLTFA
                     DHQLHAWLKSLELSPVGLIFSGSLFALVLAYTIRFLAMAIGSLETSLNKISPSLDMAS
                     QTLGKNGSAMLVKIHIPLIYKGILTAGLMVFIESMKELNASLLLRPFNFDTLATYVFT
                     FTSDEQLERAALPAIVLVLVGLLPVIWLTRSLISQSEKER"
     gene            24485..25495
                     /locus_tag="PXE50_000654"
     CDS             24485..25495
                     /locus_tag="PXE50_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5621588.1"
                     /translation="MSVLTINHLNLNFGSTKVLQNLHLAVNQNEIICLLGASGCGKTT
                     LLKAIAGLLPIEQGDIHLAGECLKSKAVEERQIGLIFQDYALFPHLTVADNIQFGLSK
                     LPKVQQKAITEKMLSVVHLQGFESRFPHELSGGQQQRVAIARALACQPELLLLDEPFS
                     NIDSQTRYAMIQEIKQILKSQNVPAIFVTHSKEEAFAFADKIAVMDQGKIIQFGKPNE
                     LYHSPVNPFVADFLGGTNYLNCNVTEDNVLCSPIGEFRLFPEMNVQKGRYRWLLRPEQ
                     IILKPNELGLGKVVGKLFLGLYYRYQVEIKGIEIVTYQSQELKIGEQVEVGFQVREFI
                     LF"
     gene            25505..26131
                     /locus_tag="PXE50_000655"
     CDS             25505..26131
                     /locus_tag="PXE50_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family oxidoreductase"
                     /protein_id="HDL5621589.1"
                     /translation="MKIEVWSDYACPFCYIGKRHLEQALAQFEGEVEVVFRAFELDPH
                     ANGEPEGDIQQRLMRKYQKTAEQADEMIRYVEQAGKQAGLDLRYRTTQYTRTFEAHRL
                     AKFAESKDLGEAMVERLFKAYFTDNTILAKRTELISLALDIGLERDEIAQLLTGDDFG
                     HEVREDERVAHKYGIHSVPFFVINEKLGVSGAQPPEILLDAIKQALQK"
     gene            complement(26193..27683)
                     /locus_tag="PXE50_000656"
     CDS             complement(26193..27683)
                     /locus_tag="PXE50_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF853 domain-containing protein"
                     /protein_id="HDL5621590.1"
                     /translation="MSLYQIARTETGKVISLNAKMANRHGLIAGATGTGKTVTLRKLA
                     ESLSDDGVPVFLVDVKGDLSGSVQAGNFSGKIAERILQFNLGGEDYLKGYPVSFWDVF
                     GTSGIPLRITISEMGPMLLSRLLNLNDTQGGLLNLVFRVADDRGLLLIDLKDLRALLK
                     FVADNAKEFQLEYGHISAASVGAIQRALLRLENEGADNLFGEPALDLHDWIQTRNGRG
                     VINMLNAEKLINSPRVYSAFLLWFMAELFENLPEVGDPEKPTFVLFFDEAHLLFDDAP
                     KALVDKIEQVVRLIRSKGVGVYFVTQNPLDIPDSVLGQLGNRIQHALRAFTPRDQKAV
                     KSAAETFRANKEVNVVEAITQLGVGQALVSVLDEKGMPTPVEIAYIYPPKSQLAPLAT
                     GERDSLVKQDDLYHHYSQYVDNESAFELLNAKAEAIKAEQAAAEEANNDFFGGILSSI
                     FGSKKKKDQSITEQVVSQVAHSVGRNLRNQVTKQIMRGILGAITKK"
     gene            complement(27742..28977)
                     /gene="rhlB"
                     /locus_tag="PXE50_000657"
     CDS             complement(27742..28977)
                     /gene="rhlB"
                     /locus_tag="PXE50_000657"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase RhlB"
                     /protein_id="HDL5621591.1"
                     /translation="MSNHLTEHRFIDFPIHANVLNALDSKGFEFCTPIQAKTFPITLK
                     GKDIAGQAQTGTGKTLAFLIATFNHLLNNEIETSKNQPRALILAPTRELAVQIGADAE
                     LFLKHSDLKLALAYGGDGYDKQVQEIEKGVDILVGTTGRVIDYVKQGIINLDKIQVIV
                     LDEADRMFDLGFIKDIRYLMRKAPKPSERLTLLFSATLSAKVRELAYEDMDNAEYIEI
                     EPLQKTGHRIKEELFYPSNEDKMALLLTLLEEEWPERCMIFANTKHKCEEIWQYLSAD
                     GHRVGMLTGDIPQKKRLSLLDNFTKGNLDILVVTDVAARGLHIPDVTHVFNYDLPDDK
                     EDYVHRIGRTGRAGESGHSISFACERYAVNLPAIEEYIGHQIPVSQYDKESLLTLPKV
                     NRSRSKKTFLAKTKKNSRN"
     gene            complement(29065..29787)
                     /gene="recO"
                     /locus_tag="PXE50_000658"
     CDS             complement(29065..29787)
                     /gene="recO"
                     /locus_tag="PXE50_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HDL5621592.1"
                     /translation="MTIDQWQRAFVLHRREYSENSLLVEFFTEHHGRITLLAKGARRA
                     RSPLKAVLQPFTPLLLRWSGKGDLKTLTKAEPAALTLPMETLSLYSGFYINEVLARVL
                     ENQTAYPELFQHYLRCITELATQKQIEPILRTFEFHTLKALGYGVDFTHCAATGLPVD
                     PKMTYQFQENQGFIASLLQNNQSFLGSDLLAFAQLDFSEKSTQQAAKRFTRMALKPYL
                     GSQPLKSRELFQSILPNKLKSG"
     gene            complement(30017..30934)
                     /gene="era"
                     /locus_tag="PXE50_000659"
     CDS             complement(30017..30934)
                     /gene="era"
                     /locus_tag="PXE50_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013525392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HDL5621593.1"
                     /translation="MTEQIQTPAKTYCGFIAIVGRPNVGKSTLLNKILGQKISITSRK
                     AQTTRHRIVGIHTEDQYQAIYVDTPGLHIEEKRAINRLMNRAASSAIGDVDLIIFVVE
                     GTKWTEDDEMVLNKLRSAKAPVLLAINKIDNIKEKEELLPHITELSQKFDFAEILPIS
                     AQRGKNVHILQKFVRQSLRQGEHHFPEEYVTDRSQRFMASEIIREKLMRFTGEELPYS
                     VTVEIEQFKMNERGVYEINGLILVERDGQKKMVIGAGGQKIKTIGIEARKDMERLFDN
                     QVHLELWVKVKAGWADDERALRSLGYMDE"
     gene            complement(31037..31711)
                     /gene="rnc"
                     /locus_tag="PXE50_000660"
     CDS             complement(31037..31711)
                     /gene="rnc"
                     /locus_tag="PXE50_000660"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HDL5621594.1"
                     /translation="MQLERLQKKLGYQFHNLDYLIQALTHRSAATKNNERLEFLGDSI
                     LNFTIGKVLYDKFPKANEGELSRMRATLVREQTLAIIARKFDLGDYLKLGPGELKSGG
                     FRRESILSDCVEAIIAAIYLDQDMAKAMEKVEDWYSDLLKDISPGDSQKDPKTRLQEF
                     LQGRKLPLPEYDVLDIKGEAHNQTFRVTCKVINVEEVFIGIGTSRRKAEQNAAEKALA
                     VVKTKK"
     gene            complement(31757..32716)
                     /gene="lepB"
                     /locus_tag="PXE50_000661"
     CDS             complement(31757..32716)
                     /gene="lepB"
                     /locus_tag="PXE50_000661"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HDL5621595.1"
                     /translation="MAQFMPIIFLGIIYGIWQWLDSMQLPNTISIILVALVIICGGFW
                     AFYKFSADPRRKQAIVLQQKRLGRELTAEEIAEIQPKSAVGEFFASLFGILFFVTVLR
                     SFLFEPFQIPSGSMEPTLRVGDFLVVNKFSYGIKEPIWQNTLIETGKPERGDVIVFKA
                     PAQPHVDYIKRVVAVGGDKIKYDFATQQLTVTKANGETKVFEYSEGKPNPEFFYHGEM
                     QVERTEKGNVTHQILNHPMAFNYAPYFYQQEGQAEGEWVVPQGYYFVMGDNRDNSEDS
                     RFWGFVPERNIVGKATFIWLSLDKKANEFPTGLRFSRMFTSIN"
     gene            complement(32803..34596)
                     /gene="lepA"
                     /locus_tag="PXE50_000662"
     CDS             complement(32803..34596)
                     /gene="lepA"
                     /locus_tag="PXE50_000662"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018345454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HDL5621596.1"
                     /translation="MQNIRNFSIIAHIDHGKSTLSDRLIQTCGGLSDREMEAQVLDSM
                     DLERERGITIKAQSVTLNYKAKDGEIYQLNFIDTPGHVDFSYEVSRSLAACEGALLVV
                     DAGQGVEAQTLANCYTAIEIDLEVVPILNKIDLPAAEPERVAEEIEDIVGIDAIDAVR
                     CSAKTGLGIEDVLEEIVKKMPAPEGDAEAPLQALIIDSWFDNYLGVVSLVRVKNGVLK
                     KGDKIKVMSTGQSYNVDRLGIFTPKQVDTTELKTGEVGWVVCAIKDILGAPVGDTLTH
                     HHNPATEVLPGFKKVKPQVYAGLFPISSDDYEAFRDALGKLSLNDASLFYEPETSSAL
                     GFGFRCGFLGLLHMEIIQERLEREYDLDLITTAPTVVYEVVQTSGETIYVDSPSKLPA
                     INNIAEIREPIAECNMLVPQEFLGNVITLCVEKRGVQTNMVYHGNQIALTYEIPMGEV
                     VLDFFDRLKSTSRGYASLDYGFKRFQTADMVRVDIMINGERVDALAIIVHRANAAYRG
                     RELVEKMRELIPRQQFDIAIQAAIGNHVIARSTVKQLRKNVLAKCYGGDVSRKKKLLQ
                     KQKEGKKRMKSLGNVEVPQEAFLAILHVGKD"
BASE COUNT         9952 a         7593 c         6446 g        10766 t
ORIGIN      
        1 gtaatgtccc ttttttgaat gtctactaca aaatgggata ttttacaaac cgattgacta
       61 atgaagcaag aatataatta actacaactg gatatatttt gcaaatttcc cgataaattt
      121 caccgcttgt agataaaaac cgtagataaa aaccatagat aaaaaatagg agctaaacat
      181 ttttagcccc taccgtcatc agaaataaat cccgactaaa atcgccacga acacacctaa
      241 gccgaaatag tggttattta gaaacgcttt aaagcattcg ctacgttctc tttttttggt
      301 cagccaacat tggtagataa acagcgtggc acttaaggct aatacgacaa aatagccgat
      361 gtgataatct tttaccacgc ccaataaccc caataaaatc aaggtgataa actgtaataa
      421 cgcaataatt ttattatcgt attgagcgaa taaaattgca gtggatttaa ctccaattcg
      481 taaatcatcg tcacgatcaa ccattgcata ttgggtgtcg taggcgactg tccacgctag
      541 attggcaaaa aacagcagcc agcattcaag tggaagagtt tccgttaccg caccaaatgc
      601 catcggaatc gaccaaccga atgccattcc aagcactact tgtggcaagt gggtaaaacg
      661 cttcataaag ggataaatca ccgccagaaa aactgccaca aaggaaagca gaaacgcata
      721 gcggtttagc attaaatcga gcagaaaagc gaacaacagc aagatggcaa aaatgacttt
      781 tgcctcagtg gtggtcactc tgccggtagc taatgggcgt tgagaggtgc gtttaacgtg
      841 tccgtcaatt tctctatcgg cataatcatt aatcacacaa cctgccgcac gcataacgat
      901 taccccaagg gtaaaaatgg ctaaaatcgc aacaggcggc attccctctg cggcaataaa
      961 taacgcccat agtgtggggt gtaataataa taacgtgccg atgggtttat cgaaacgcat
     1021 taactgggcg taggcaatcc atttttgttt agaaaaaaga gtttcgttat tcattacaaa
     1081 ttttgacgat aacgtccgat tggcttaaat gagtctgtaa ttctaacggt aaatcttgat
     1141 ctgtaaacaa ataatttact tctttaacat ttcctaaacg tgcaatagct gtacgggtaa
     1201 actttgaatg atcggtcact aaaaccactt gtcgggaaca ttccattaat gcacgcttta
     1261 cctgcacttc gtggtaatcg taatcgagca tagagccgtc catatccacc gcactaatgc
     1321 ctaaaatccc aaagtccaaa cggaattggt taataaagcg aaccgtttct tctccgatta
     1381 gcccgccatc acttcttagc cctccgcctg ctaccgtaat ttggcaatct tcattttgca
     1441 tcagaatatg agccgcattt aaattattgg taactacttt taaattttta tgcgaaagta
     1501 aggctaatgc cactgcttct gaagtcgtgc caatatctaa aaataatgat gctccatttg
     1561 gaatcagttt tgccacctgt tgggcaatcg catttttctc gtgtgagaaa aattgcttgc
     1621 ggtgggtgta atcactattc tccgtattgg aaggagcggc tgccccaccg tgatgacggc
     1681 gaatcagatt attttctgcc atttcattca gatcacggcg aatggtttgc ggactcacat
     1741 tcaattcagc cactaattgc tcggtactca catagccaag ctgattaacc agctcaatga
     1801 tctttttgtg tctgtttgcc tgtttcatat ttcctctttt gcaaataatt tgcagaaaaa
     1861 gaccgcttgc aagcggtctt ttttcagtta aattttacaa tttatcaaca agttcaaccg
     1921 catagccgat atagcttgcc ggtgtcatct ctttcaaacg atttttttca ttttccggaa
     1981 tttccaactt atcgataaac tcacgcattg cggtttcatc aacccgtttg cctcgagtca
     2041 gctctttaag tttttcatac ggtttttcaa tgccataacg acgcataaca gtttgaattg
     2101 gctctgccaa tacttcccag ttttggttga gttcatcacg caagtgttgt tcattcactt
     2161 ctaatttgct aatacctttt aaggtggacg cataagcaat taacgcataa cctaaaccta
     2221 cacctaaatt acgcaacacg gtggagtcag ttaagtcacg ctgccagcga gaaatcggca
     2281 atttttgccc caaatgagcc attaccgcat ttgccaagcc aagattgcct tcggaatttt
     2341 caaaatcaat cgggttcact ttatgtggca ttgtgctaga gccgatttca ccggcaatag
     2401 tgcgttgttt gaagtgattt aaggcaatgt agccccacat atcacgatca aaatcaatta
     2461 aaatcgtatt aaaacgagcc acgcaatcaa agaactccgc aatataatcg tgcggttcaa
     2521 tttgggtggt gtatgggttc cacgtcacac ctaacgattc cacaaattct tggctgaaag
     2581 tgtgccaatc aatctccgga tatgctgata aatgtgcgtt atagttgccc actgctccat
     2641 tgattttagc gagaatttct aaattttcta actgtttata ttggcgttgt aaacgatatg
     2701 ccacatttgc catctcttta cccattgtgg tcgggcttgc cggctgaccg tgtgtgcgag
     2761 aaagcaacgg aatatgttgg taacatttcg ccagctctgc tacagcatca atcacttttt
     2821 tccattcagg taataatact tcttcacgag cggttttaag cattaaagcg tgcgaagtat
     2881 tattgatatc ttcagaagta caagcaaaat gaataaattc attcaccgct tgtaattcag
     2941 gcaacgcttc acatttctct tttaggaaat actccaccgc ttttacatcg tggttggtgg
     3001 tacgttcaat cgttttaatc cgattggcat cttctaacga aaaatcagcc acaatttggt
     3061 ttaggtaatc gtttgctttt tcagaaaaca ctggaacttc attaatttgt gtatgcgatg
     3121 ccaatttttg taaccagcga acttccaccg tcacacggaa ttttaataag ccaaattcac
     3181 taaaaatcgg acgaaggctc gcaactttgt cttgataacg tccatcaatc ggggataacg
     3241 cagttaaagc ggtaagttcc attgttttat attctccaaa taggtaaatg ttcggttaga
     3301 tttgacgata aaatttctgt gcttggttaa aaattttctt gcgtgaaaat aaaaattgcc
     3361 aacggcttcc gccgacttgc tgccacaaaa taccggctcg aataccggct agtagcgagg
     3421 ctcgaatttt attctgtata tccgggcgaa ccaagtaatc ttgcattccc atcacgtgaa
     3481 ttttcgtacc taacgggctg ataatatcgc tataaatagc ggctaaattg gcaatcattt
     3541 gatctgccat cacattatct tcatacaggg ctaactggcg ttccacttgc tgtaaacgct
     3601 gggctaactg ttgttttgct tcagggtttt tattgagttt ttggctaagg gcgagcaggc
     3661 ttatccaata acgtccgact tcggtatcta atttgccgtt accgccgcca gtttgagcta
     3721 atgcggtttc taagcccatt tttaaatggg aaagatcatc gccaaataca cttaacgttg
     3781 attccggctg agtgattaac aggctttcta aagcacactt aaaagcctct ctgtctgcca
     3841 tgcctttatg tgcaaattgt tgcactaacg tcgccgcttg gcaaacgccg gcataagcaa
     3901 gggtaatatc gtggtaatcc gccatctctg taaaattcaa tatgataaaa cattagtggg
     3961 aatatagcat tttttcagct tcttttgaat ggcaaaaggc atttattcta ttgaaaaata
     4021 aatgcctttt cattaatacg caatttgctg caaaaactat cctaccaatc gcccattatc
     4081 tattcgataa accacatcaa atttatccag tccgctttgg cggtgagtga tcataattaa
     4141 ggtgcgatca cagcagtgag tcaaaattag gtttaaaatc tgctgttcgg tttctctgtc
     4201 cagtccttct gttggctcat caagtaagac taattcagca gaactcagga gcaaacgggc
     4261 aagccctaaa cggcgttgtt cgccaccaga aagcggtctg ccgccctcgc ctaaccataa
     4321 atttaagccg tctgtttcaa gcaaatgccc taagcctact tttcttactg cttcttgcat
     4381 ttgttcgtct gtagcttgag cattccccat taataaatta tcttttaggg tttggctaaa
     4441 aatatgcact cgttggctta aggtaactaa ttttgagcgt aacatcggct ctgaatattc
     4501 gtcaatttta caattattca gccaaatttg accgcttgta gggtcgtagt tgcggtttaa
     4561 cagttggaat atggtcgatt ttccgctacc cgttttacct aagattgcca ctttctgccc
     4621 ttttaatacc ttaaaggaaa gattatttag tacgttttgc tcgccgtaat aagcaaagct
     4681 cacgttttca cagcgtacaa gcggttgatt ttggctcaaa ttttgccatt ctgccttgct
     4741 accaaatgtt acattaggct gttgttcggt aatttcacta atccgctcgg cggcggtaat
     4801 cacttgccct aaatgcaaaa aggcgatacc aatcggggaa agaatctccg ccgatgccat
     4861 tacacagaaa atcactaacg caattaaggc ttcagggtat tttgcagtgg gcacattaat
     4921 cgaagttgaa accaaataga tcaccacaca agtcaaaatg ccgttggata acattatcaa
     4981 gctatttgat aagccggaca gtcggctttc tttgctttga gcgttcagcc attgttgttc
     5041 agtttgctgt agtttttcgc tcatttggtt caagttgcca aagagtaaaa attctgcatt
     5101 taactgtacc cactcaataa attggctgcg gtaatttgct cggctttgta ttgcattacg
     5161 ccctaatttc aaacccaatc gataaaatac ggtaggaata acggcaagca ataccaatag
     5221 tgtgccgcaa atgatcagca ttaatggcac ggaaacaaaa gaaagcccga ttgccataaa
     5281 tgcaataatc atcactgcac tgacaaaagg cgagactaaa ttcagatata gggtgtctaa
     5341 cgtatccaca tctgccacca agcggtttaa caattcgctg tttctaaagc gatttagccc
     5401 gcttggactc agtggaatca attttttaaa gacgctagca cgcaaattcg ccaatacccg
     5461 aaaagtcgca tcgtgggtga ctaaacgttc aaagtaacgt gaaattgtcc gccctactgc
     5521 caaccctctc acccccgatg aagggtagaa aaagttaaaa ataagcgcat tgccggctag
     5581 aaatgaggca gctaaaaacc aaccggaaag gctgagcaaa ccgatacttg ccgctaatcc
     5641 taaaattgcc agcacaacac ctaataatag tcgcccaaaa tgggtttggt agagagcaaa
     5701 aaacgggaac aacgatttca ttagatttct ccctgatgca ctaattcatt atgtattaat
     5761 tccgcaaaaa agccggtgtg ttctaattca gtgaaacgac ctttctgaat gatttgccct
     5821 tgtttcatca cccaaatttc atcgcattgg gttaaatctt ccactcgatg agtaatcatt
     5881 agcgttgttt gctctcggct gagattatgc agagcggcta acacttgctg ttccgaatcc
     5941 atatcaaggc ttgcagtcgg ctcgtctaac agtaataatt cgtacgggcg aagcaacgct
     6001 cgtgcaatcg caatccgctg tgcttgcccg ccagagatac cgatattact gtcttgcact
     6061 tgatgctcca accctaaacg tgccacaaat tcatcggctt ttgaaagctg taatgccttg
     6121 gctaattcag aatctgtcgc attagggttg cctattaaaa tattctcttt caaactgcca
     6181 tgcattaatt gcggattttg ccccacccac gctaatttcg ctcgccattg gcttaaattt
     6241 aaatctcgca gttcggtgcc gttaatcgta accgaccctt cataaggcaa gaaaccaagt
     6301 aacatattca ttaatgaact ttttcctgca ccactttgcc caaccaaagc gatatgttgg
     6361 tgtgcattca actcgaaatt taacgcttgg gttaaggctt tgccttgtgg tgagaagatc
     6421 acgcaatctt tggcttgaat cacaagcggt tgattttcaa cattttcttg caaattgcca
     6481 ccttgcgttt tcaccttttc ttttaagaaa gtttcgatat tatctgcggc actaatcgct
     6541 gctgccttgt cgtgataaaa cacgccaagt tcacgcatcg gttggtaaaa ctcaggtgcc
     6601 accattagac aaaagaagcc gataaataag gtcacgcccg taccataata gccaaaatcc
     6661 agctcaccta aaaaaataaa gccaaaatag accgccgtca ccgcaatcga taccgccgtg
     6721 aaaaactcca ataccgcaga ggataaaaac gccattttta gtacgtccat cgtactgatt
     6781 cggaaatctt cggtgctttg gtagatttgt tcagtctgct tttccgcttg cccaaataag
     6841 cgaatggttt ctaaaccttt taatttatct aagaactgtc cgctaatacg ggaaagaatg
     6901 ccgatattac gctgatttgc ctccactgct ttcattccgg ctaaaatcat aaataaaggt
     6961 aataatggca ttgttgcaaa taaaatagcc cctgctgccc agttaatcgg gaatacaaaa
     7021 cagaggatca gtaatggcac tatcagcgat aaaaattgct gtggcaaata gcgtgcgtag
     7081 aaattatgta gattttccac ctgctcgagc attaaggttg cccagctgcc cgccggtttt
     7141 tgttgaatgc tcatcggccc gactgcttcc attttggcta gaatttggcg gcgaagatgt
     7201 aaacgcaagg tttgccctgc tttgaaaccg acacgctcac gcagaaaaat gaagaatgct
     7261 ctggcagcaa aacaacagaa taagagcata atttcaacca gaaagctatt cggtgactgc
     7321 tttccgataa gcattttgtc taacattgtg gcaatcagcc acatctgtcc aatcatacat
     7381 aaactactga aactccctaa cagtatgttt aagtgcatat attttttgat gactttttgc
     7441 tgacttttaa gccatttttg taattcgcgt tggcgttgtt tttccataat tttgtcaatt
     7501 tttttgtttt ttcaaccgct tgtaaatcgg gtttgccatt ctactataaa gcaaaaaggt
     7561 tgttaatggc gaaacattaa caacctttca ttcagcctta actagaatag ctcgtcaaat
     7621 tcaaagcgat acattaaatc taccgcttgg ttaatacttg agacccattg taagtacaat
     7681 cttggcgtta aattatagcg taaggttaat tcggtaagcg gtgcaaaaat gcccacgcca
     7741 tacttcactc tgaatttagg ggcaaggctg gcacttactt ctactttggt gttatcgcca
     7801 atacctgcgg tggtcacgct taaatctttg agtccgaaag tgctaccaac atcacccacc
     7861 aatttactgc tttttgataa gctcatactg agtaatgccg ctgcgactgc attactggag
     7921 ctggtatcgc cactgctttc caatgaacga ccagttaaaa tataggaaag tgcttcattt
     7981 tgcgacattg ccggatcaga gaatactttt accgttggat tgtctgccaa accggtcact
     8041 cttaccccag ctgtaatggt cggatcttcc attgcctccg gattgcgtat agcttcaata
     8101 tctaaggttg gctgagacgg tgagccggca aaactaatat cacctttacg aatcagcaag
     8161 tcttgaccat aagcggcaaa tcgtccttca cgcaaatgaa cttgcccgta aagccctaaa
     8221 ccttgtttgc cttgcctgac agacaataag ccattcacgt tactgtttaa accataggct
     8281 ttgagtttga catcattacc gatgttaatc ttaatatctg cattaattgc cattccacct
     8341 gaggtttgag ccggaatatt acgttggcta aacggcactt tatttttcac agagccgtcc
     8401 ataatcacct catctccact tacactgacc gcactttcag gtaactgctc gacttcaatt
     8461 cttgcccaag ggatatctac atttccactt aaggttaaaa gagttggcgt tgccgtcact
     8521 tgaatatccg ggctaactgc cacttttgcg atattaggaa tatccacttg gaaacggtta
     8581 gcttgagcgt gaacccgtgt tttccacgca tttagatctc gccagtctgc atcaccctcc
     8641 aaacgcagtt cgctttgttt ggtttgtaat ttaccgctta aagtcgatgt tgccccgtgg
     8701 aaattcattg ctaaattccc acctgtaata tcaaacggca ttgtaacaga gcgagctttt
     8761 aactctgtaa cgtttagatt tccgtgcaat aacggagagg ttgcggtgcc gctcacggta
     8821 agacgagcat tcacattgcc atcaaccgaa tcgccccgtt caagtagcgg tcgaatcagc
     8881 tttaagctta attggtcaag atgaatattg ccggataacg cacgagcctt acttaaatct
     8941 ttcatcacta aatcagtcga aagtctgccg ttattttcga cccttaaatc agatttaagg
     9001 gttaaattat tgtcagacat tttcagatca attttaagcg gtgaaacggt gagtgggaaa
     9061 ctttttcccc cctccatttt ttgaataaat ttaatcgcat tagaggttaa atccagattc
     9121 acttgaggct gtttgttttt aaaccaagct gcatcgcctt tggcattcac aatccctgaa
     9181 agctggctgt ttttctccaa aaattgttgc aataccgcta aatcaaagtt acggatttca
     9241 aaaggcactt taccctcaac accggcatta aatgcagtcg ggaaacaaag attaattttc
     9301 cggttatgcc aacaatgtgc ggaaatattg gcgttaatgg ctttattgtc atatttcaca
     9361 ttcactgctt tatctgcttg gaattgacca aactcggtgg attgaatcga aacttggctt
     9421 aattgccctt cccaaatttc tttcaaacgg tcaaattttc cagaaatttg caaatcagca
     9481 ccaaccggat tgccttttgc acttaatttc aagctatgat tttcttcatt tccttttagc
     9541 aataaagtgg catttcccac tttgatttca ttataggcaa attgacgtaa ccccaaggtt
     9601 aaatcccctt gaatggtttt ctcagtggta attttgcctt ttgcggttaa attttgcagt
     9661 ttaaattgct catagcctac atttgaggcc actaaatcta aatcaatgtt aggttctgaa
     9721 accttacccg ataatttggc attaccattc acgctggctt ttaaattcgg cactaaccct
     9781 tgcaaattag gggctttaat atccgcatag aaatcagatt tttcgcctaa cacgcctttt
     9841 aaatcgatct tattttcacc atacaccagc gataagcccg gaacatctaa aagttgttga
     9901 tgatcggctt ttaaattacc gcttaagtgt agatttttct gtaataacga acctttaata
     9961 tcaatattcg agacgtccgc tttccatccg ctagctgaat tgccccgtcc tgcataacct
    10021 tcggaagata aagaaccgga caataccgcc ggccagtctg ccagtaggga tttagtgtta
    10081 atatgctgaa gtttcaaatt tgaacgccac gcaacgccct cgctccaatc cactaaaccg
    10141 tcgatcttcg ccgtaccttc cagcgtattg agacttaaat cttgtatatt aaaatgggtt
    10201 aattcccctt tgccagttaa actagccgag cttgcaggca cgcccattcc tttggcactg
    10261 actttagcct ccaaagcgta atccaggaga ttgccattaa gcctcatggc gatattctct
    10321 aaactcagca catcaccatt ttgctgagga gcaaacggat aacgcattga ctcactcttc
    10381 agcgataaat caaagggagt tttcgcctga gccagtgcaa cattgccctc caacgaggcg
    10441 ctaattgcac cagccgtctt cacttttagg ctggttttgt catatagctc accggaaaga
    10501 gaggcttcaa tttgattgaa cggcaatttt actttcgccg tttttgcctc gtgaccactt
    10561 agcgtccaac ttagcggata attatcttgt aacgataaag aaccgcttgc ggttagatcc
    10621 ccttggtcgc ttttgaaatc taaacttttt aggttgatat gctgatcttt tgcttgagcc
    10681 tgaagctgta aagaggcaac atttaacaat gagatcggct caatcaaatt ccctttttca
    10741 tctttagctt tttgagcaat cgctacattc gcaatatcaa tctgttcaat attgagatca
    10801 agaggcaaac taaagcgaat atttttatcc aataacggct gtgctaattg tgctttaatc
    10861 gctgcccaat ccactttatt atccacctgt tcggcctgtg caacagtttt tctctgtaat
    10921 tggtgaaagc cctctacgac tttttcactg gttttttcca ccgcctcttg aatcacttta
    10981 tcagcaatct cttgtggatt tgtcgctgat aacgcctctg tttttgcatt tttttgtgca
    11041 aaatcgaccg cttgttcagt atcagtttcg tctaacttta aggctaaaag cagatttagc
    11101 ccctctaact gtgtcgggtg aacggtaata gcccgccctt taccagaaag tgcagtgtgg
    11161 aaatgattaa gatgaatatc catatcatca actttgacct tgatattctc taaattgata
    11221 ttttgagctg aaatccccaa tggcaaattt aattcggtga aaggttcggt ctcttctttt
    11281 ggctgagaag ggggtaattt agtcgtatca atcaacacct ctgtatcttt aaggctgaga
    11341 ttattcaaac acatttcata gtggagcaag cagctaaaac caatatgcag atctgcttgc
    11401 ccaaccgtta cattcacacc gtccatcaca aatcgggcat cagaaagctg taacccatct
    11461 tgcaggctac cttgcacttg cccaagttgt aatggctcta cgaatttatc tacccagctt
    11521 aacactttac gttgcccgta acctgtgcat agaaagagaa tggcgagtaa aagtagaata
    11581 aacgtcagac aaaagccgtg cttcaaaaac cgccactttg attttttagg ctgtgttgct
    11641 tgtggctctt gtgctgagtc cgtttgattt gtggctgttt gtttattttc gtcagtcata
    11701 atcgtgcata tttatgaggt gataaaaagt aaacaagcgg tatgcgaaat tttactgaaa
    11761 ttcgaccgct tgttttcatt tacagatcgg aacctaaacc aatataaatt tgtattcctt
    11821 tggaattatc tggtgatttt accggcgtgg cgacatcaaa tttaatcgcc ccgataggtg
    11881 atgcccaacg cacccctaag cccgtaccgt agtagagatc ctgagttttg aatttattcg
    11941 atgccaagcc tgcatcataa aaaattgcac cccaccaatt agggtaaacc tgatactgat
    12001 attctactgt gcctgtggct aaatgagagc ctccgacacg tttgccatta ctcggatcac
    12061 ggggggaaat atccttatag ccaaagcccc gcacactcat atcgccaccg gcaaaatagc
    12121 gtaacgccgg tggaatacgt tcaaattgat tggctttcaa ataccccaac tccgccctta
    12181 aatagaaccg atggttatca aagtaagttc tcgcccaaga tgtcgaggct ttataactat
    12241 aaaagtttac atctgaacct actgcacgac tcccccagtt taccgttaat ttttgtgtat
    12301 ccccccataa tgggtaaggc ttgccatctg ttctggttcg attcaatgat gccgttgggt
    12361 aaactaataa ggttttaaat cgatcattag cttgagtaaa agaatcgtaa cgggctttta
    12421 aaccaacaga aaatgaccaa ccggtttcgt gagtccagaa acgttgtaag ccaagggtgg
    12481 cagcggttga ttttgtatcg ttttgatctt cgttttctaa agtgccggat aattggtaat
    12541 aataatgtag cggatcttct ctaagtggaa tattataacc aaattcaaat gtctgctccg
    12601 gcttagaaac gtacgttcgg ctttcaatac tatgacctcg gctatttaac caaggtttct
    12661 tccagttaag ctgtaacctt gggccaactt cagtttcgta gcctatccca atttccactt
    12721 cattgcgttt tttaggctga aataacacat ttaaatccac taatttatcc tgttcattta
    12781 aatgtggctc aaccatcact gatgaaaacc aattactgga aaggtaatct tgggttaaaa
    12841 tcgaaagatc gttagctaaa tatggctcac cggaatgaat tttaagaata ttttgcaaat
    12901 attcttcttt gatttggcta tcaacaaacc ggatttgtcc ataatggtat cgttttccgc
    12961 tatcatagcc taaacgccaa tccgctttat gatcggtcgg ataaacttcc aaacggtgat
    13021 aaagccaatg accgtcaaaa taccctttac taaaagcggt actttcaata tcacctttaa
    13081 aattatcata ggttttatgg tttaaacgac taccttgttt tggggcttta ctgactagat
    13141 gagcgaaatc ttcgtccgtt tttgcatcgc cttgcaaaac aatatcggtt tcatcaattt
    13201 ttaccgtctc tttatctagc tcaacattta atactaagag cggtttcttt ccctcttgag
    13261 gtagctgcac aaattggtat cggctattat aatagcccaa ggctctcaga gctttatcta
    13321 ctgtggtttg caccaaatat tgataacgct ctgaaccatc tgcatattca ttggcaattt
    13381 gatctaaata tagctccaca tttttcttgg catctttacc ctgaatgcct ttgacttcta
    13441 aagtgactaa tggctctatt tctggctcat catcactatc ttccgctaat ttttcttgca
    13501 gattttcaac tcgctcacga tctacgtcag acagcctttg ctcttgattt gcttgtgcca
    13561 ttgaagcaaa agccactaaa cagcagaatg ttaaaaaatg tagttttgta ttcattagta
    13621 acctttttat tcttttggaa tgccacgcaa aagcggaata ctgtcataag gcggaacaga
    13681 acttaacgct ggctcttgct caaagagcat aatgaatggt ttgtcaggca ctgttttttc
    13741 attacgccac aagtttccaa cactcaccaa ttcaatatct tgaggtagtt gtgctaaatt
    13801 ttgcttcagt acactaatcg tattcttgcg agggtgtcct atcaccaccg ctaccccgtt
    13861 ttttcgtgcg tgattaattg catgtgcaaa ctgtttttgt acatcagcaa gcagatcgct
    13921 atcatctaaa aaaatgtctc tctccagcgt attaatacca aattgacgag ccgttttagc
    13981 cgccacacta ctgccaatag ttttactgtc taaaaagaaa agcgtatttt cttttaacac
    14041 tttcaacaaa tgttgcattg tagcagagtc tgaagttgct ccactgccca tatggttatt
    14101 taaaccaata gcatatggta cttgaccacg agaagtatga ataagtttcc gaattttctc
    14161 ttcgttatca ccaatatgaa tacccccctc ttcaattggc tgtttcgatt taggttccat
    14221 tggcaaatga atcaaaatat cccgtttttg gttataagcg tcctttgccc gttctgttgc
    14281 atagggtgca acaggaataa tcgccacgct taccgccttg ggtaaggcta agatttctcg
    14341 atcttctttt attcgatagc ccacatcatc aattacaatc gccatttgag ctgcttgtac
    14401 aagcggtgta aaaagcacaa acatttgcaa aaaaatgtta aaattcaacc gcttgttaat
    14461 ttgtttaaac atctatttca ccaaatttag aggattaatc ggcgtgcctt tacgggtaac
    14521 accaaaatag agtgcagaac ggctttgtcc cccactgtta ccaaccttcg caataacctg
    14581 tccgccttgc actcggctac ccttgctgac tgaaatagat tggttatagc cataaaggga
    14641 aatatcacca ttgccgtggt caatcgcaac catattgcca taccctgcaa gccattgagc
    14701 cattatgact cgcccgctcg ccattgctct aaccgaagta ccggcagaag caccaatcac
    14761 tacaccgtgc caattattac caaaaggagt gataatattg ccagacaccg gcatcgtata
    14821 tcgaccagcc ttgatcggtg ttctctcaac attctcagtt gttttggact gaccggattt
    14881 tgcctgtttt tcccgctgtt gttcacgttt ttctgcttgc tgagcctctc tttgcgcttg
    14941 ttctaattgt tgttttagtg cctgttcatt gctgcgtaaa ttctctaatc ggctttgatc
    15001 ctgctcaagc gttttatcga ttaaacgtaa ggtactttca cgctggcttt gtactttctt
    15061 taaatctttc tcttgtttct tttgttcatt aagttgcgtt tgatgatctt tttgctggcc
    15121 tttcaattca tcacgtctgg ctttaagatc agcttgggtt ttacgaattt caacgatcgc
    15181 atcaatgcga atattattca tatgctgata ataagcggtc attctttccg cattttttgc
    15241 ctcttcagac attaaacgct ctaagaccga agggttcacc ccagaacggt aggcagagtc
    15301 caactgctct tttaattttt ctttctgctg tttttccaac ttttctaaac gggcaatttc
    15361 agtctcagtc gctttaatgg tctggcgaac ttccgttaaa gacatttcgg ttttttgtaa
    15421 tttatccaac accttcccca tttctacttc ttggtttttt agggtagatt gcaacgcatt
    15481 acgtttttgc ttttgttcat taatttttga ggtttgctgt tggatttttt gctgaatctg
    15541 attaagatta tttgcaaaag aaaaaggggt agaaaagctt attaccccac tgaaaatagc
    15601 agtccaacag taagaattta ttcgtttcac cagcatacct ttgtttcttc aaaatattat
    15661 taaggttata ttctaatcgg ttatttgctt aagatcagct ttttagtgaa agaatttaac
    15721 tatctatttc aaaatataaa gaattttgct ataaatagca caatttcaaa tccattaatt
    15781 ttactcaaag ctaaggagtc attatgcaat tagtatttat ccgtcacggt ttcagtgaat
    15841 ggaatgctaa aaacttattt accggttggc gtgatgttaa tttaacagaa cgtgggattg
    15901 aagaagcaaa atctgccggt caaaaattaa aagcagccgg ttttgaattt gatattgcgt
    15961 ttacttcggt tttaacccgt gcgatcaaaa cttgtaacat cgtattagaa gaatcagacc
    16021 aattatggat ccctcaagtg aaaaactggc gtttaaacga gcgtcactac ggtgcattac
    16081 aaggtttaga caaaaaagaa actgctgaaa aatatggtga tgaacaggtt cacatctggc
    16141 gtcgttctta tgacatctct ccaccggatt tagacccaca ggatccaaac tcagcacata
    16201 acgaccgccg ttatgctaac ttaccaaaag atttaattcc aaatgcagaa aacctcaaaa
    16261 tcacccttga gcgtgtgtta ccattctggg aagatcatat tgcacctgca ttaatttcag
    16321 gtaaacgcgt attagttact gctcacggta actcattacg tgcattagca aaacacatcg
    16381 aaggcatttc tgatgcagac attatggact tagaaatccc aaccggtcag ccattagtgt
    16441 atgaactaga tgacaactta aaagtaatca gcaaacgtta cttataattg gtaaatttcc
    16501 gataaaaaat aaccgcttgt agtgcaacac attacaagcg gttatttttt gttaattttt
    16561 tgcaaatggc aaagaacaaa aataaaggcg aatcatacat tcgccttatt gttttaaagt
    16621 agattagaaa tctaacaact ctttctcttt tgctgctaat acttcatcaa cttttttaat
    16681 gaaggtatcg gtgatttttt gaatatcttc ttcagctttg tgttgttcgt tttcgctgat
    16741 ttctttatct tttaataacg ctttgatttg gtcattagca tcacgacgaa cattacgaat
    16801 tgccactttg ccttgctcac cttctgcttt aacgattttg attaaatcac gacgacgttc
    16861 ttccgttaat ggtggaagcg gaacacgaat ggttgtgccg gcagaagatg ggtttaaacc
    16921 taaatctgag gttaaaattg ctttttctac cgcagagatt aaagatttat caaatacgtt
    16981 taccgctaaa gtacgggcat cttcagctac cacgttcgct acttgacgta atggagtcgc
    17041 agagccgtaa tattccactt gaataccgtc taataaagaa ggttgggcac gacctgtacg
    17101 aattttcgca atatgccctt ttaaagcctc aaggcttttt tccatacgat cttgggtatc
    17161 tttcttgatt tcgttaatca ttgatttttt atccttttat ttagtaactg agagttaaac
    17221 agagaaaatt aattattcag aaatggttgt accttcttca gtaccgaata ccacattgcg
    17281 taacgccccc ggtttgccca tattaaagac acgaattggc attccgtggt cacgagcaag
    17341 cgtgaatgct gctaagtcca ttacttgtaa ttcttgctca ataacttgcg catacgttaa
    17401 tttattatat agttttgcat ctgcgtattt tgctgggtct ttatcataaa cgccatcaac
    17461 tttagttgct tttaatacca catcagcttc aatttcaata ccacgcaagc aagcagctga
    17521 atcggtggta aagaacgggc tacctgtacc ggcagagaaa atcaccacac gtttttcacg
    17581 caacatttta attgcttcag accagttgta agtgtcgcaa atcccattta attggaacgc
    17641 agacattaat ttagcattta cctctgcacg gtgtaaggca tcacgcatag ccaaaccgtt
    17701 cattacggtg gcaagcatac ccatatggtc gcccactaca cggttcattc ctgctttggc
    17761 taattttgca ccacggaata agttaccgcc gccaagtacc acaccaacct caacgccttc
    17821 agcaagtaat tctttaatct ctaacgccat acgatccaaa atagacgggt cgataccaaa
    17881 accttcactg ccttgtaggg cttcaccact taatttgaga agaattcgct tataaatagg
    17941 tttgctcatt ttaattgcct cttaactgta tggactaaac acaaaattac gttattatag
    18001 aacaatccaa tataacgata aactaaaaat attcactaca atgaaatcca aacaactttt
    18061 cggcattctt gtcgctattt cgctggcaac tgctgctagc tgtttaatgc taatcggatc
    18121 aggctttttt ccaaatccga gtatctttga agtcattttg ggcgtattcc tcatcatcgc
    18181 tcttgccagc tctaaatgga cttattattt actcttactg ccaatcagca tcgcttatgc
    18241 aatttatacc ccggttggga taaaattcgg taaaccgact tacgagtata tcgcctctat
    18301 ttttgctacc gatatgatgg aaagcaaaga gtttattgct caactgccga ttttaaatat
    18361 tgcggcgggc attgcgattg tactagcggt cattttttat cgaaaaatta ccaatcgcta
    18421 tcaaatccgt tttttacgca ataaaacatt cgtgatttcg gcttttgtat taatgctgtt
    18481 ttcccttgca ccgtttaaat tttttcagga gttctacaat tcgagcctaa aggtaaagaa
    18541 agaattggaa gtgctgaaca atttaacgct agattcacaa tggggacaat caaccctcag
    18601 ctcaacttca aactacgatg attatgtact gattatgggc gaaagtgcga gaaaggatta
    18661 tcaccacgcc tatggctatc cggctgccaa tacgcctttt atgagttcgg caaaaggaac
    18721 cttgattgac ggtttaacct ccggtggcac aaacactatc gcctcattac gcttaatgct
    18781 cactaagccc gatacggaaa aatgggaagc aaattatggg ttaaccttaa ttgatttaat
    18841 caaatctacc ggtatcaaga cctattggat ctcaaatcaa ggctatttgg gcaattacga
    18901 tacgccgatt tcctctatcg gtaataaaag tgatgtcaaa attttcacta aagccggcga
    18961 ttcattaaat accaatgtga gcgattttga attgttaccg cattttgcta aagtgattga
    19021 agaacctgct caagggaagc gtttcatctt tctgcattta tatggctcgc atcctattac
    19081 ctgcgatcgt ctcaccgatt acccgaaaat gtttgacgat gacaaactgc caaaacgcta
    19141 ctttaatgta aattgctacg tgtcatctat caagaaaacc gatgaattgc tgaaacgggt
    19201 atatgatttg ctagtgaaaa accaagaaaa tcaccagcgt tcattctcaa tggtttattt
    19261 gtctgatcac ggtttatcgc acgaggtttc aaaagagaac attgttatcc acaatggaaa
    19321 ggatagaagt aaattacact acgatattcc gctgtttaaa atttcaagcg atgataccca
    19381 acgtaatgag tataaagcct ttaaatccgg cttaaacttc actaatggta ttgcgaattg
    19441 gattggtatc gaaaatccgt tattagataa agaaattaat ctttttaacg aacaaaacga
    19501 taaaagtgat tatgggctaa agaaaatcat tgaaacgcag tctactgtag aagatccagc
    19561 tgttcctatt cctgaaagct acttatataa agcgactaat tagcaaaagt aagtaacaaa
    19621 aaagcaggct ttaagcctgc ttttttagtt tttagtatca gaaaaattaa gcgttaccgc
    19681 cagtgatttt cgctacttct gctgcgaaat cttcttctac tttctcaata ccttcaccta
    19741 cttctaaacg aataaagtta gaaactgaag tatttactga ttttaaatat tgacctacag
    19801 attgagatgg atccattaca aacggctgac cggttaatga aacttcaccg gtgaatttag
    19861 ccatacggcc ttcaaccatt ttttctgcga tttcttttgg tttaccagaa ttcatcgcaa
    19921 tttcaatttg aatttcacgt tcttttgcta ctacatcagc agaaacatct tctgggttta
    19981 caaattcagg tttgcttgca gcaacgtgca ttgctacttt cttaagctca tcttcagagc
    20041 ctgcacctgc tactaataca ccaattttcg caccgtgtaa gtattgagca ataacttcgc
    20101 cttctaagta ttgaacacgg cgaatgttca tattctcacc gattttcgca actaatgccg
    20161 cacgtttttc ttcaaattgt gcttgtaatg cttcgatagt tgtaccttta tttgcaactg
    20221 caaaatcagc aacttcgttc gctaattcta agaaaccggc atcttttgca acgaagtcag
    20281 tttcacagtt catttcaact aatacgccaa aacctgaagc gacacgagca aggattacac
    20341 cttcagctgc aacacgacct gcttttttag ccgctttcgc ttgaccggat ttacgcatat
    20401 tatcgattgc taattcaata tcaccgttcg cttcaactaa tgctttttta cattccatca
    20461 tacctgcgcc ggtacgttca cgaagttctt taactaatga tgctgtgatt tcagccattt
    20521 taaattcccc ttatttgata tggtaaaaca ggctctcacc tgcctagaaa tttcattgtt
    20581 tagggcaggt taaaacctgc cccctcaact gaattattcc gcagaagctt cttctgctac
    20641 ttcaacagtt tcaacaccgc gaccttcttt gattgcagca actgctgaat ctaagtaaag
    20701 ttggatagca cgtgttgcat catcgttacc gggaatgatg tagttaacgc catctggagt
    20761 tgagttagta tcaacaatcg caaataccgg aatacctaag ttgtttgctt ctttaattgc
    20821 gatatgttcg tgatcagcac cgataacaaa aattgcatcc ggtaaaccgt tcatatcttt
    20881 gataccgcct aagcttaact ctaatttttc taactcacga gtacgcatta acgcttcttt
    20941 tttagtgatt ttgtcaaaag taccgtcttg agtttgagtt tctaaatctt ttaagcgttt
    21001 gattgattga cgaactgttt tccagttagt caacatacca cctaaccaac ggtggtttac
    21061 gtagaattgt tggctctcta ctgccgctgc tttaacagca tcacttgctg cacgttttgt
    21121 accaacaaat aatactttac cattgttact agcaatgcga gttaattccg ctaatgcttc
    21181 gttgaataaa ggtaaagttt tttctaagtt gattacgtga acaccattac gagcaccaaa
    21241 gatgaatggt ttcatttttg ggttccagta acgtgtttgg tgaccatagt gaacgcctgc
    21301 gttaagcata tcgcgcatag aaacttgtgc cataagaatt ttccttcaaa gttgtttgtt
    21361 ttgccactta tgaacggcaa aacggggttt agcctccaca tatcctagaa aatcaatctg
    21421 ttaaagacac cccaattcct agcttgtgat atgtgtgtgt tttagtgtta aaaaataaat
    21481 gtgtacgttt tgcctgaata gacaaaaacg gggcgtatta tgccaaaaaa caaacaattt
    21541 gccaattatt ttattgctct cttcgcatta ctaaatcaag ctcaaaaata aaaaccgttc
    21601 tcattattga ctaaaaaaat ggggaggttt agaatgtctt tcattctgtt atgaaaacct
    21661 gtctgaagga gactatcatg aaaaaaacac tttctgcact tgctattgct gcagccactt
    21721 ttacatcaac ttcaacgctt gctgcaaatg aagtgaatgt ttattcttac cgccagcctt
    21781 acttaattga gccaatgcta aaaaactttg aaaaagatac tggcattaaa gtaaacatca
    21841 tcttcgctga taaagggttg gttgatcgtg taaaacaaga aggtgaatta agtcctgctg
    21901 atgtgctttt aacagtagat atttcacgcg taatggaaat tgttaacgct gatcttgcac
    21961 aaaaaattga ctctaaagtg ttagaaaaaa atattcctgc acaattccgt gactctaacg
    22021 accaatggtt tggtttaacc acacgtgctc gtgttatcta cacgtcaaaa gatcgtgtag
    22081 gtaaattacc agcaggcttt gactacctag atttagctaa accagagtat aaaggtaaag
    22141 tctgcgtgcg ttcaggcaaa aactcttaca atgtctcact attcgcggcg atgatcgaac
    22201 attacggcat tgaaaaaacc aaagcattct tagaaggctt aaaagcgaac ttagcacgaa
    22261 aaccacaagg tggtgaccgt gatcaagtaa aagcaattaa agaaggcatc tgtgattact
    22321 ctatcggtaa cagctactac tacggcaaaa tgttagatga tgagaaacaa aaatcgtggg
    22381 ctgaagcagc gattattaat ttcccgagtg gtgaacacgg cacgcacaaa aacatcagcg
    22441 gcgtagttat tgcaaaacac tcaccaaata aagcaaacgc ggtgaaatta attgaatacc
    22501 taagtggcga aaaagcacaa ggtttatatg ctgaacttaa ccacgaatat ccagtaaaag
    22561 aaggcatcga gccatcagca atcgtaaaag gttggggtac gttcaaatca gataccatca
    22621 aacttgaaga tatcgcaaaa aattacgaag ccgcattaaa attagttgat gaagtgaaat
    22681 ttgacgattt ctctgagaaa aaataatcaa ccgataagcg gtcatttttc cacaaaaatt
    22741 tgcaaaattt tgttaaaata caaccgcttg caaaaggacg cattttgcgt ccttttattt
    22801 ttttatgaaa taacaggctt aaagaaaaat gcgatcacaa ttttgctgga aaagtattgc
    22861 tgccctaaca acttttatcg ttttgcttcc tcttattgca atttgctatc acgcattgca
    22921 aggggataat gaaaaccttg ctcacctttg gcaaacaatg ttgccaatct atcttaaaaa
    22981 ctcaacttta ttagtattag gaaccgtttt ccttgcactg atttttgctc tgcctaccgc
    23041 ttggattgtg gcaaattacc gtttttgggg gcaaagaacc ttacaatggt tactttgttt
    23101 gcctctcgct atgcctgctt atttaattgc ctatttatat accgatttat tagattactc
    23161 aggtgctttt caaggctggc tgcgtagtat ttttggctgg actcatccgc aagattactg
    23221 gtttcctcaa attcgtacat tgtatggtgc ttgctttgtg cttgcgttag tactatatcc
    23281 atacattttt ttattagtgc gagttgcctt attagaacaa tctgaaaact taacacacag
    23341 tgcaaaaatg ctcggggctt cgccctctca gttgttccgt cgaattacgc tgccattaat
    23401 tcgaccttct gttgccgtag gcattgcatt agtggcaatg gaaacgcttg gcgatttcgg
    23461 tactgtggcc tattttgccg tgccaacact tactacggca atttatgatt cgtggctagg
    23521 ctatcacgat cttggtactg ccagccagat tgcgatcttt atgttgctaa tgattttcct
    23581 gtttttaagt ttagagcaat atagtcgccg taaacaaaaa agctatcaac gtggctatga
    23641 aaagaaatca gcctttaaat ttttaactgg ttggaaatta gcattagccc ttgcttggtg
    23701 ctggggttta ttggcgttag cctttttcat tccgtttggc aggttgctct attgggcata
    23761 cgactatttc gagcaagcgt ggaatttaga ctttgtccaa ttttcgctta atagtttgaa
    23821 agtatcgatc atcgcctccg tgataacggt actgattgct ctacttctgc atttttctaa
    23881 acgtttgaat acccgcaaaa ttttagtcaa aaatgaccgc ttgtcattac aacttgcctc
    23941 actgggctat gcggttcctg gcacagtatt agcgatcggt ttactttcgc ctttaacatt
    24001 tgccgatcat caactccatg cttggctaaa aagccttgaa ttatcacccg ttggattgat
    24061 tttttcaggc tcactctttg cattagtatt agcttatacc atccgatttt tagcaatggc
    24121 aattggcagc cttgaaactt cgctaaataa aatctctcca tcgctggata tggcgagcca
    24181 aacgcttggt aaaaatggct cagcaatgtt agtaaaaatt catatccctt taatttataa
    24241 aggtatttta actgcaggat taatggtctt tattgagagt atgaaagagc taaatgcttc
    24301 tctgctactt cgcccattta attttgatac actcgcaacc tatgtgttta cctttacatc
    24361 agacgagcag cttgagcgtg ctgctctgcc tgccatcgta ttggtgttag tcggtttact
    24421 gcctgttatt tggcttacca gatcccttat ttcgcaatct gaaaaagaaa gataaaggaa
    24481 ttttatgtct gttttaacta ttaatcatct caacctcaat ttcggcagta caaaggtttt
    24541 acaaaatctc catcttgctg tgaatcaaaa tgaaattatc tgtttgctag gtgcaagtgg
    24601 ctgtgggaaa actacactgc tcaaagccat tgcaggttta ttgccaattg agcagggaga
    24661 tattcattta gcgggtgaat gcctaaaaag taaagccgtg gaagagcgac aaatcgggct
    24721 gattttccaa gattacgctc tttttccaca cttgacggta gccgataata ttcaatttgg
    24781 cttatccaaa ttgccaaaag tacaacaaaa agcaattacc gaaaaaatgc tttcagttgt
    24841 gcatttacaa ggctttgaaa gccgttttcc acacgaactt tcgggcgggc aacaacagcg
    24901 tgtcgctatt gcccgagcat tagcctgcca gccagaattg ctactgttag atgagccgtt
    24961 ttccaatatt gacagccaaa ctcgctatgc aatgattcaa gagatcaagc aaatcttaaa
    25021 aagccaaaat gtgcccgcta tttttgtaac ccatagcaaa gaagaagcct ttgcatttgc
    25081 cgataaaatt gccgtgatgg atcaagggaa aattattcaa tttggtaagc caaacgagct
    25141 ataccattct ccagttaatc catttgtggc agatttttta ggtggcacaa actatcttaa
    25201 ctgtaatgta acggaagaca acgtgttatg cagccctatt ggcgagttcc gactcttccc
    25261 tgaaatgaac gttcagaaag ggcgttaccg ttggcttctt cgcccagaac agattatctt
    25321 aaaacccaat gagctaggtt taggtaaagt ggtaggcaaa ctgtttttag gcctatacta
    25381 ccgctatcag gttgaaatta aaggcattga gatagtaact taccaatctc aagagctgaa
    25441 aattggcgaa caagtggaag tgggcttcca agtaagagag tttatcctat tttaaggaga
    25501 atatatgaaa attgaagttt ggtcagatta tgcctgcccg ttttgttaca tcggcaaacg
    25561 ccacttagag caagccctag cccaatttga aggcgaggtt gaagtggttt tccgagcctt
    25621 tgagcttgat ccgcacgcta acggcgaacc ggagggcgat attcagcaac gcctaatgcg
    25681 gaaatatcaa aaaaccgcag aacaagctga tgaaatgatt cgttatgtgg aacaagccgg
    25741 caaacaagct gggctagatt tgcgttaccg caccacccaa tacactcgca cctttgaagc
    25801 tcatcgcttg gcgaaatttg cagaaagtaa agacttaggc gaagcaatgg ttgaacgttt
    25861 attcaaagcc tattttaccg ataacactat tctagctaaa cgcacagagc ttatcagttt
    25921 agccttagac attggcttag agcgtgatga aatcgctcaa ctgctcacag gtgatgattt
    25981 cgggcacgaa gtccgtgaag atgagcgagt cgctcacaaa tatggcattc acagcgtacc
    26041 gttttttgtg atcaatgaaa aactcggggt atccggggct caaccgccag aaatattact
    26101 tgacgctatc aaacaggcat tgcaaaaata atccgaaaaa agaccgcttg ttaagctaaa
    26161 caagcagtct tattcttctt ataatttaca atttattttt tggtgatcgc acctaaaata
    26221 ccacgcataa tttgtttggt gacttggttg cgtaaatttc tgccaactga atgcgccact
    26281 tggctaacca cttgttcggt aatcgattga tcttttttct tcttcgagcc aaaaatggaa
    26341 gagagaatac cgccaaagaa gtcattgttt gcttcttctg ccgcagcctg ctctgcttta
    26401 attgcttctg ctttcgcatt aagtaattca aacgcagatt cattatcgac atattggctg
    26461 tagtgatgat agagatcatc ttgcttcact aaactatcac gttcgcctgt ggctaatgga
    26521 gctaattggc tttttggtgg atagatatag gcaatttcta caggcgttgg catacctttt
    26581 tcatctagca ccgaaaccaa cgcttgcccc acaccaagtt gcgtgatggc ttctaccaca
    26641 tttacctctt tattcgctcg gaaagtttcc gctgctgatt ttaccgcttt ttgatcacgt
    26701 ggcgtgaaag cacgcaaagc gtgttggata cgattgccaa gctgccctaa tactgaatca
    26761 ggtatgtcca acggattttg cgtaacaaaa taaacaccca ccccttttga gcgaattaaa
    26821 cgaaccacct gttcaatttt atccaccaat gccttagggg catcgtcaaa caataaatga
    26881 gcttcatcaa agaataaaac aaacgtcggt ttttctgggt cgccaacttc tggcaaattc
    26941 tcaaagagct ctgccataaa ccaaagcagg aatgcactgt acactcttgg tgagttaatt
    27001 aatttttctg cattcaacat attgattaca ccacgcccat tacgggtttg gatccaatcg
    27061 tgcaaatcta atgcaggctc accaaataaa ttatctgccc cttcattttc aagccttaat
    27121 aacgcacgct gaatagctcc aacgcttgct gcagaaatat gcccatattc cagttggaat
    27181 tctttcgcat tatctgcgac aaatttaagc aacgcacgca aatcttttaa atcaattagc
    27241 aataaacctc tgtcatctgc cacacgaaaa acgagattta acaagcctcc ttgggtatcg
    27301 tttaaattga gtaaacgaga aagtaacatc ggtcccattt cggaaatagt gattcgaagt
    27361 gggatacctg atgtaccaaa tacgtcccaa aacgaaactg gatagccctt taagtaatct
    27421 tctcccccta aattaaactg taaaatgcgt tctgcaattt ttcctgaaaa attacccgct
    27481 tgtaccgagc ccgaaagatc accttttaca tctactaaaa atactggcac gccatcatca
    27541 ctcaaagatt ctgccaattt gcgtaaagta accgttttac ctgtacccgt agccccagca
    27601 attaaaccgt gccgatttgc cattttggca ttaagcgaaa taactttgcc tgtttctgtt
    27661 cgagcaattt gatacaaact catctttcat tctcttaaag gtaaattaat tttttgttct
    27721 catcatataa aaatttatca cttaattacg gctattcttt ttcgtttttg ccaagaacgt
    27781 ttttttactt cttgagcggt tcactttcgg taaagtcagt aaggattcct tgtcgtattg
    27841 actcacagga atctgatgcc caatatactc ttcaattgca ggcaaattaa ccgcataacg
    27901 ctcgcaagca aaactaattg aatggccgct ctcccctgct cgccccgttc taccaatacg
    27961 atgaacgtaa tcttctttat catcaggcag atcataattg aaaacgtgcg tgacatctgg
    28021 aatatgcaat ccacgagccg caacatctgt taccactaaa atatccaaat tgcctttggt
    28081 gaaattatcc agcaaagaaa ggcgtttttt ctgcggaata tcgccggtta gcattccaac
    28141 ccgatgtccg tctgccgata aatactgcca gatctcttcg catttatgct tggtgttggc
    28201 aaaaatcata caacgctccg gccactcttc ctcaagcaat gtcagcaaca atgccatttt
    28261 gtcttcattc gaggggtaaa atagctcttc tttaatacga tgtccggttt tttgtagtgg
    28321 ctcaatttca atatattccg cattatccat atcttcatag gcaagttccc gcacttttgc
    28381 cgaaagcgtt gccgaaaaga gcaaagttaa acgttctgaa ggcttaggtg cttttcgcat
    28441 taaataacgg atatctttaa taaaaccaag atcaaacatt cgatctgctt catctagcac
    28501 aatcacttga attttgtcta aattgataat gccttgtttt acatagtcaa tcactcgacc
    28561 tgttgtaccg acaagaatat ctaccccttt ttcaatttct tgaacttgtt tgtcgtaacc
    28621 atcaccaccg tatgccaaag ctagttttaa atcagaatgt tttaaaaaca gctcggcatc
    28681 tgccccaatt tgaaccgcca attcacgggt tggagcaaga attaatgctc tcggctgatt
    28741 ttttgacgtt tcgatttcgt tattcaataa atggttaaaa gttgcaatca aaaaggcaag
    28801 cgttttccct gtacctgttt gagcttgccc tgcaatatct ttgcctttca gcgtaatcgg
    28861 aaaggttttt gcctgaatcg gcgtacaaaa ttcaaagcct ttgctatcaa gggcatttag
    28921 tacattagcg tgaatcggga agtcaataaa gcggtgttcg gtaagatgat tagacatagt
    28981 atttccttga taattgtgat gtgacaagcg gtctttttta cacatttttt tgcaaaatag
    29041 catattgggc gttttttctc aaatttaacc gcttttgagt ttattcggca aaatagattg
    29101 gaaaagctct cggcttttca gcggttgtga ccctaaatag ggctttagtg ccattcgggt
    29161 aaaacgtttc gctgcttgtt gagtactttt ttctgaaaaa tccaactgag caaacgctaa
    29221 taaatcactg cctaaaaagc tctggttatt ctgtaataat gaggcgataa agccctgatt
    29281 ttcctgaaat tgataggtca ttttcggatc aactggcaaa ccggttgccg cacagtgcgt
    29341 aaaatccacc ccataaccca atgcttttaa cgtatgaaat tcaaaggtgc gtaaaatcgg
    29401 ctcaatctgt ttttgtgtgg caagctcggt aatgcaacgt aaataatgct gaaataattc
    29461 agggtaagcg gtctgatttt ccaatactct tgcaagtacc tcgttgatat aaaacccact
    29521 ataaagtgaa agcgtttcca tcggcaacgt taatgcagcc ggttctgctt tggttaaagt
    29581 tttcagatcc cctttacccg accaacgcaa caacaacggc gtgaacggct gtaaaaccgc
    29641 tttcaacggc gagcgagccc gccttgcacc tttagcaagt aaagtaatcc gcccgtgatg
    29701 ttcggtaaaa aactccacta ataaactgtt ttcgctgtat tcacgccgat gaaggacaaa
    29761 ggctcgttgc cattggtcta ttgtcataat ttcttgttaa ttatgaggtt gtaatttact
    29821 tctgccaaat ctccccctcc cctctttgct aaagagggga gatcttgcag agtatatttt
    29881 aaagtcattt tcactattta accttttata tagataggaa gatgaattta aaatttctgg
    29941 agaactagtc cccctcttta gaaaagaggg gttaggggag atttgattac gatattaatg
    30001 ctataacggg agccaactac tcgtccatat accctaaact tctcaatgct ctttcatcat
    30061 ccgcccaacc agcttttact ttcacccaaa gctcaaggtg cacttggttg tcaaataggc
    30121 gttccatatc ttttcgagct tcaatgccga tggttttgat tttttgcccc cccgcaccaa
    30181 taaccatttt tttctgacca tctcgttcta ctaaaatcaa gccattgatt tcatacaccc
    30241 cacgctcatt cattttaaat tgttcgattt ctaccgttac cgaataaggt aactcttcac
    30301 ctgtaaaacg cattagtttt tcacgaataa tttctgatgc cataaagcgt tgagagcggt
    30361 ctgtcacata ctcttcagga aagtggtgct caccttgacg cagtgattga cggacaaatt
    30421 tctgtaaaat atgcacattt ttaccccgtt gtgccgaaat tggcagaatt tcagcaaaat
    30481 caaatttttg tgaaagctcg gtaatatgcg gcagaagttc ttctttttcc ttgatgttat
    30541 caattttatt gattgccaat aaaacagggg cttttgccga acgcaatttg tttaacacca
    30601 tttcatcatc ttctgtccat tttgtgcctt ccacaacaaa gatgatgaga tctacatcgc
    30661 caatagcaga acttgctgca cggttcatta aacgattaat cgcacgtttt tcttctatgt
    30721 gtaagcctgg ggtatctaca taaatcgctt ggtattgatc ttcagtgtga ataccaacaa
    30781 tacgatggcg agtcgtttga gctttgcgtg aggtaatgga aattttttgt cctaaaatct
    30841 tatttaataa tgttgatttc cctacatttg ggcgaccaac aatcgcaata aaaccacaat
    30901 aggtttttgc aggagtttga atttgttctg tcattttgtt ttcctttcat tctgtggaat
    30961 gaatttgatg gtgcaagcgt ccacgcttgt accatttaat taaatcttta gcacaagcga
    31021 ggacgcttgc gctatcttac tttttcgttt taaccaccgc taacgctttt tctgcggcat
    31081 tttgttcggc ttttcggcgg ctggtgccaa tgccgataaa cacttcctcg acgttaatca
    31141 ctttacaggt tacacggaaa gtttggttat gagcttcgcc tttaatatct aatacatcat
    31201 attcaggcaa tggcaatttt ctaccttgta aaaactcttg caggcgggtt tttggatctt
    31261 tttgtgaatc gcctggactg atatctttaa gcaaatctga ataccaatct tccacctttt
    31321 ccattgcttt tgccatatct tgatcgagat aaatggccgc aataatcgct tcaacacagt
    31381 ccgataaaat cgattctcgg cgaaaaccac cactttttag ctctcctgga cctaatttta
    31441 ggtagtcgcc taaatcaaat ttgcgagcaa taatcgctag agtttgctca cgcacaagag
    31501 ttgctctcat acggctaagc tcaccttcat tcgcttttgg aaatttgtcg tataatactt
    31561 taccaatagt aaaatttaaa attgaatcgc ctagaaattc aagacgctca ttgtttttgg
    31621 ttgccgcact gcggtgtgtt aaggcctgaa tgaggtaatc aaggttatga aattgataac
    31681 ctaatttttt ctgtaatcgt tctagttgca tagtttatgt gaataaaggg gcgtatctca
    31741 tacgcccctg ttaagattaa ttgattgagg taaacattct agaaaaacga agccccgttg
    31801 ggaattcatt tgctttttta tctaaactta accaaataaa agtggcttta ccaacgatgt
    31861 ttctctcagg cacaaagccc cagaaacgac tgtcttcact gttatcacgg ttatcaccca
    31921 tcacaaaata gtatccttgt ggcacaaccc attcaccttc tgcttgccct tcttgttggt
    31981 agaaataagg tgcatagtta aatgccattg ggtgatttaa aatttgatga gttacattac
    32041 ctttttcagt gcgttctacc tgcatttcac cgtgatagaa aaactcagga tttggcttgc
    32101 cttcgctgta ttcaaatacc tttgtttcgc cattggcttt agtaaccgtt aattgctgag
    32161 ttgcaaaatc atatttaatt ttatcaccac ctactgccac cacacgctta atataatcaa
    32221 cgtgtggttg tgccggtgct ttgaatacaa tcacatcgcc tcgttctggt ttgcccgttt
    32281 caatcaaggt gttttgccag ataggctctt taatgccgta gctgaattta tttacgacta
    32341 aaaaatcgcc tacacgcaag gttggctcca ttgaaccact tggaatttga aacggttcaa
    32401 ataagaacga gcgaagtact gtaacaaaga ataaaatgcc gaaaagtgag gcaaaaaatt
    32461 cgcctactgc ggatttaggt tgaatttccg ctatttcttc agcggttaat tctctgccta
    32521 aacgtttttg ttgtagaaca atcgcctgtt tacgtcttgg gtcagcactg aatttgtaaa
    32581 acgcccaaaa tccaccacaa ataataacca aggcaactaa aataatggaa atagtatttg
    32641 gcagttgcat tgaatcaagc cattgccaaa taccataaat aatacctaga aaaataattg
    32701 gcataaattg tgccactgaa tgctcctttt tattcaaaat tgcaaagttt tctcaaaata
    32761 tgaccgcttg caagcggtcg tattttacac gaatattgac aattaatcct tacccacatg
    32821 aagaattgcc aaaaatgctt cttgtggcac ttctacgtta ccgagagatt tcattcgttt
    32881 tttaccctct ttttgttttt gtagcagttt cttcttacga cttacatcac caccgtaaca
    32941 ttttgctaat acgtttttac gcaactgttt taccgttgag cgagcaatga cgtggttacc
    33001 aattgccgct tgaatagcga tgtcaaattg ttggcgtgga ataagttcac gcattttttc
    33061 cactaattca cgtccacgat acgccgcatt tgcacggtga acgataatcg ccaacgcatc
    33121 aacacgctcg ccgttaatca taatatccac acgcaccata tcagccgttt ggaaacgttt
    33181 aaaaccgtaa tcgagtgaag cataaccacg agaggttgat tttaagcggt cgaagaagtc
    33241 taacactact tcgcccattg ggatttcgta agttaaggcg atttggttac cgtgatagac
    33301 catattggtc tgtacgccac gtttttccac acaaagggta atcacgttgc ctaggaattc
    33361 ttgtggcaca agcatattac attctgcaat cggctcacga atttctgcaa tattgttgat
    33421 tgctgggagt ttcgatgggc tatccacata gatcgtttcg ccactggttt gcaccacttc
    33481 gtaaactacg gtcggagcgg tagtaatcaa atcaagatcg tattcacgct ctaaacgctc
    33541 ttgaatgatc tccatatgca acaagcctaa gaagccacac cggaagccaa agcccaacgc
    33601 acttgaagtt tctggctcat agaacaatga cgcatcattt aggcttaatt tgcctaaagc
    33661 atcacggaag gcttcgtagt cgtctgaact aatcggaaat aaccctgcat aaacctgtgg
    33721 ttttactttc ttaaagcccg gtaatacttc agttgctggg ttgtggtggt gggttaatgt
    33781 atcgcccact ggtgccccta aaatatcttt aatcgcacaa actacccaac ctacttcacc
    33841 tgtttttagc tcggtagtat ccacttgttt tggcgtgaaa ataccaaggc gatctacatt
    33901 gtaagactgc cctgtactca tcactttaat tttatcgcct tttttcagca cgccattttt
    33961 cacacgcact aaagacacaa cgcctaaata gttatcgaac caagagtcga taattaacgc
    34021 ttgtaatggt gcttccgcat cgccttctgg tgcaggcatt ttcttcacga tttcttctaa
    34081 aacatcttca atgcctaaac ctgttttagc tgaacagcgt actgcatcaa tggcatcaat
    34141 gccgacaata tcttcaatct cttctgccac acgctcaggc tcggctgctg gtaaatcgat
    34201 tttatttaaa attggcacaa cctctaaatc tatctcaatt gcggtataac aattcgccaa
    34261 cgtctgtgct tccaccccct gccctgcatc aaccactaat aaagcacctt cacaagcagc
    34321 aagcgagcga gaaacttcat atgagaaatc cacgtgccct ggcgtatcaa taaagttgag
    34381 ctgataaatt tcgccatctt tcgctttata gtttaaggtt acactttgtg ctttaatagt
    34441 aattccacgc tcacgctcaa gatccattga atctaatact tgagcctcca tttcacgatc
    34501 tgataagcca ccacaagttt gaattaagcg gtctgataaa gtcgatttgc cgtgatcgat
    34561 atgagcgata atcgaaaagt tacgaatatt ttgcattttc atcgggcagt taatgtcctg
    34621 ttttgttatt tgtttatcaa aaattaatcg gggaattgta cttgaaatac aaggttttgc
    34681 aaagaaaaca aatagcaata agcggttatt ttttcctaaa aatgtgcaaa tttcttgaga
    34741 aaaatgaccg cttgcac
//
LOCUS       DANLZQ010000015        32625 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.015, whole genome shotgun sequence.
ACCESSION   DANLZQ010000015 DANLZQ010000000
VERSION     DANLZQ010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 32625)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32625)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32625
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.015"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..311
                     /locus_tag="PXE50_000663"
     CDS             <1..311
                     /locus_tag="PXE50_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621597.1"
                     /translation="HEDIEFIYDEKISTEPPPYMEEEKFQKIIMRFSKDIKIMMHNHI
                     NFIESDRFAEWILEKACVRSKTLTSFYGDKSVIRAVPPLDWSGKYKYTKIGFRLCYDL
                     "
     gene            676..1404
                     /gene="ttrB"
                     /locus_tag="PXE50_000664"
     CDS             676..1404
                     /gene="ttrB"
                     /locus_tag="PXE50_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetrathionate reductase subunit TtrB"
                     /protein_id="HDL5621598.1"
                     /translation="MDLSKRSFLKELSALTVGASFVPLQSAQAFMPAWREGDENKRYA
                     MLIDLRKCIGCQACTVSCSVENATPLHSFRTTVRQYEITNGTQVVNNVVLPRLCNHCD
                     QPPCVPVCPVQATFQRKDGVVVINNEQCIGCGYCVQACPYDARFINEETKTADKCTFC
                     THRLEVGLLPACVESCVGGARVIGDLNDPKSQISQLYQAHKDDLKVLKPEAGTVPHVF
                     YVGLDDDAFVSKIDGQPMLWTGEA"
     gene            1406..2437
                     /gene="nrfD"
                     /locus_tag="PXE50_000665"
     CDS             1406..2437
                     /gene="nrfD"
                     /locus_tag="PXE50_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysulfide reductase NrfD"
                     /protein_id="HDL5621599.1"
                     /translation="MIREVLVEPQHIVWLPWIVHYFFFVGVAATAVFTAVLFAKKSLK
                     PTACELAAVTVALIGSIVAPVALTADLHQPSRILHFYTDFAWRSPMAWGAIILPLFSV
                     AVAGYFVLALAHHTRPNLPKWLAWLQLPILQNQGLLWAFRLFATLTAIGIIGYTVLET
                     YQTGTRTLWHSAWLLPIMLFSAWAVALGLTQAVCKMLFHTQTNTGLWTKLCLILTALS
                     LVGLAFSSPQATQDFAQLFNGSITAYLVGIFWLIALICNFSAKNHRLQWLGVLALIAF
                     GWLLRWVLVIQVQTIAKTNALQNPYHFDWTAVDGGLGIVSIFGLTVLVSIVVWQLILI
                     ICGGRKGEQ"
     gene            2427..5522
                     /gene="ttrA"
                     /locus_tag="PXE50_000666"
     CDS             2427..5522
                     /gene="ttrA"
                     /locus_tag="PXE50_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetrathionate reductase subunit TtrA"
                     /protein_id="HDL5621600.1"
                     /translation="MNNKRRNLLKGGLALGGAAAFGAGYSPKVSEIAKGVMHGTSGEK
                     TRDAIHGNSLTPEYQVKDGKLLSNPEQIVCNTQCMGCWTQCGIRARVDLNTNQVIRIS
                     GNPYHPLSSDKTLPFGMPIAKAELLLAGESGIENRSTACARGAAFLEGVNSPYRITQP
                     LKRVGKRGEGKWQTISFEQLVEEIINGGNLFGEGEVEGLKTIRNLVDPINPKQPDLGM
                     KANQLLVTFAGPEGRQPILQRFAQKSFGTINFSNHGAYCGAAYRAGSGAFMKDFDNQQ
                     HAKPDWDHAEFILFIGTSPAQSGNPFKRQARQLAKRRPDDNFSYVVVSPRLEMTSSLA
                     TQNNHWVPIKPEGDLALVMGMLRWIIENERFNADYLSRPSLAAMENAGHVSYANASHL
                     IICEPNHPKFGQALRISDLQDVQLDPEEKVEENLIVVKDQASGELISAKDCLQAVIFV
                     EQIAKLLDGSEVLVKSSMQLLKEATQEKTLAEYSDICGVPVQTIENLAKKFTSHGHKA
                     NAITHGGTMHSTGFYTSWAILLLNAMVGNLNKKGGMAVAAGKFKDFGDGPRYNLANFP
                     NEVKPKGTNLARSKKAYQNSSEFKQKVTKGENPYPAQGAWYPFTGGQTTEMFTSMVQG
                     YPYFAKAWINHMANPVYGLTAMNPIALEKLKDPKILPLFVSIDAFMNETTALTDYIVP
                     DTHNFESWGFSTAWGGVPQRTSTARHPIVPSKNAKTAEGDTICMENFVIAVAKKMGLP
                     GFGENAIADLEGNRYPLHRTEDYFLRAAANIAFAGEKPAPDASEQDLLLTGVQRIMPK
                     IEQTLKAEERLKVANVYCKGGRFAPHESAWKEENMEFQWKNCLQIWNENVYKAQHHSN
                     GEHYWGCPRYMSPRFADGSTLEQHYPQSEWGFKLISFKSNIMSSITAPLLRLLSIKPE
                     GLVAMNRLDAEEKGIKHGDVVKLSTPTAGLTVQIVVLDGIARGTIGIEHGYGHKQIGA
                     SSYTIDGVEIPANPMIAKGINLNDLGIIDHTKAVKSPWVDWVCGSAVRNGIPAKVEKL
                     A"
     gene            5663..6508
                     /locus_tag="PXE50_000667"
     CDS             5663..6508
                     /locus_tag="PXE50_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDL5621601.1"
                     /translation="MTFVKKTALSLIATALFATSSFAAEQSQYQHIRNATAKIEYAGK
                     TFLVDPYLAEKDRYLPPNAKKRNPTLDMTVSIDEVLNGVDAVIVTHTHHAHWDDVAQQ
                     RVPKNLPIFVQNAGDARLIRSQGFTDVRVVGKDTPFEGVTLTRTRGQHGTDAMYANPK
                     IAEMVGDAMDVVMKAEGKPTVYLVGDTIWNHEIEHSFNTYKPDFVVLNAGCAKLPNFE
                     GSPIMCTEDVSKAHKIAPQAKILTVHMDALPQTSISSDQMRDYVQKEGLNRVTVPKNG
                     DVIKF"
     gene            complement(6621..8018)
                     /locus_tag="PXE50_000668"
     CDS             complement(6621..8018)
                     /locus_tag="PXE50_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HDL5621602.1"
                     /translation="MKLSKLAFSVALALTVTACTTGNMSNDGTLQQAQQTYQSYDEIT
                     KQYQINEQWWQGYTDAELNRVVDLAIKNNLDLAKSGIAVNKALYNANLVGANLVPTFS
                     GSGSVSAAKGLGSASSNNVSTGVSTTAAQAAFNLSYTVDLWRRLADTASAAEWTHKAT
                     IEDLKATRLSIINAVVTTYYQLAYYRDAIRITEESIRHYEQISRILTNKMNAGAIDSL
                     AVDQAQQAVLNARNSVIDLKTNQKIAEQTLRNLLNVQPNTPLNIRYPNIMSVKLQGVD
                     LNVPVSAIANRPDVVGSLQRLQSAFKTLTATEKSWFPTLTIGGSITGSATNIGNVADN
                     PVGNGLIKLDLPFLDWNRVKNNVKISETDYVTARLNYEQKITSALNEIDRYYYSYTQS
                     RSSLKILQDTNAKNKRISSYYKNRYEQGVSEFREWITALNTELNSQLAILNAKYAILT
                     NENAVYQAMAGKYRR"
     gene            complement(8108..8731)
                     /gene="gmk"
                     /locus_tag="PXE50_000669"
     CDS             complement(8108..8731)
                     /gene="gmk"
                     /locus_tag="PXE50_000669"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HDL5621603.1"
                     /translation="MSLGNLYIISAPSGAGKSSLINALLADLPRSEVQLSISHTTRQP
                     RPAEQDGVHYYFTSHDEFKQLIEQGYFLEWAEVFGNYYGTSLPMIERSLEQGIDVFLD
                     IDWQGARQIREKVPNVKTVFILPPSKTELEKRLIGRGQDSAETIAKRMAEAVSEMNHY
                     NEFDYVIINDDFQQALAELKAILIAERLSLGSQQIRHQHLITDLLNN"
     gene            complement(8844..9317)
                     /gene="gpt"
                     /locus_tag="PXE50_000670"
     CDS             complement(8844..9317)
                     /gene="gpt"
                     /locus_tag="PXE50_000670"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HDL5621604.1"
                     /translation="MSEKYTNEKYVVTWDMFHMHARKLAENLLPATQWKGIIAVSRGG
                     LFPAAVLARELGIRHVETVCIASYDHDSQGELNVLHAADTDGEGFIVVDDLVDTGNTA
                     KEIRRMYPKARFVTVFAKPHGAPLVDDYVIDIPQETWIEQPWDLGITFVQPLARR"
     gene            complement(9463..10872)
                     /locus_tag="PXE50_000671"
     CDS             complement(9463..10872)
                     /locus_tag="PXE50_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HDL5621605.1"
                     /translation="MKKYPLLFSLFSPVVWAEKVIEHNTDPISFERQPQAVKFEQNVV
                     KNSQKPTAYQPAYSVNQNVEQQINQAILSQDWATLEPLLSRYPQTENFDPLLWHYAQA
                     ALAYAKKDHQTAVFHYRQLLAKPPSLVYPRFDLALILAEDQQFRAAEQEFKAIQAHLP
                     PELAKIARNTQVQIAENEAWQPDFYLQYTQTDNVNNASSSPIVNVNGRIFRKNADSLP
                     QSAKGVRYGLGLSKLHNVKGNHFVGLTLNYSGIYYWDNRDYREQSVSVSPNYSYRTVA
                     YRLTFSPFIEQNWLGSSRYNVQFGATLNGLRYLNSQWLVSGSFTHLQKRYFEELTASR
                     YNSYQHQLSGGVQWQAVKNGRFFANLDGVREIAREKAQSSNKWLARVGAVFQGERWAT
                     QASIGFGKRYFADKHYLFGYKRLDTEYQANLAVWNRTWHWQGIVPKLNFRYQKIDSNI
                     ADFYSRQNKEVFFTLEKLF"
     gene            complement(11068..12288)
                     /locus_tag="PXE50_000672"
     CDS             complement(11068..12288)
                     /locus_tag="PXE50_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin transporter"
                     /protein_id="HDL5621606.1"
                     /translation="MSIKKVTLASLILLGLTACSSGGSGSSSNNVAKPNTKPQTTQQQ
                     TDKAAAEKAAKDKAAKEKAEAERLAAEKAAKEKAEAERLAAEKAAKEKAEAERLAAEK
                     AAKEKAEAERLAAEKAAKEKAEAERLAAEKAAKEKAEAERLAAEKAAKEKAEAERLAA
                     EKAAKEKAEAERLAAEKAAKEKAEAERLAAEKAAKEKAEAERLAAEKEVDPIAIIKAK
                     GIDDTNYGLKLGNSKETIEGKVTVRTQSYLYNQPYSVVTAQAVQRNGWENGNYIDKVD
                     GTVTVKGLKTEKLPTEGTATYSGKAFNHDGAKGFNGGDLTYNVNFSKRTGSGRVEGEF
                     GNLIVLEEGTINNTQISSTVHGNNPLNLSGKYTVEFFGKNAEEIAGEIQTKANLTGEV
                     SNFGLAGTRGDIQK"
     gene            12491..13945
                     /locus_tag="PXE50_000673"
     CDS             12491..13945
                     /locus_tag="PXE50_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-histidine dipeptidase"
                     /protein_id="HDL5621607.1"
                     /translation="MSEISTLAPQLLWQWFDKACAIPHPSYHENELAEFIVNWAKSKN
                     FFVERDEVGNVLIRKPATKGMENRQTVALQAHLDMVPQANTGTVHDFTKDPIQPYIDG
                     EWVKAKGTTLGADNGIGLASCLAVLDSDDLAHPTIEVLLTMTEEAGMEGAIGLRPNWL
                     TADIMINTDTEENGEIYIGCAGGENVNVTLPIFLVPHQQDSAVTVTLKGLNGGHSGCD
                     IHTTRANAIKVFARILEQAHNEVEFQIAEIQGGSVRNAIPREAHATLVFSAKNQQKLT
                     ACLSQTAEQVKAELKIAEPNFQFLIEEAQLPEQAFDLASTARVIHFLNVMPNGVVRNS
                     DVVENVVETSLSIGVLNTEASEVKATILARSLIEGGKEEIRSKIRSLTALVGAEVEFS
                     GNYPGWEPNPNSKITPLTKAIYDEILGYESQIKVIHAGLECGLINKIYPNMDFVSIGP
                     TILNAHSPDEKVHIPAVEIYWKLLTKLLEQAPEK"
     gene            complement(14020..15309)
                     /locus_tag="PXE50_000674"
     CDS             complement(14020..15309)
                     /locus_tag="PXE50_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5621608.1"
                     /translation="MDIRQKIAHNKMTSFQWLVVGLTVLLNMLDGFDLMALAFTAKSI
                     REELQLDGAAIGSLMSAGLFGMAIGSLFLSPLADKFGRRPLLLIGTGLATLGMLLTYF
                     ATSAFEIGVWRVLTGLGVAAILTGTNVLVSEYSSQKWRGLAIAIYASGFGIGAMLGGM
                     SAVLLQGEYGWRAVFLVGSILTGAVFVLLFFVLPESVEFLISKHPVNAKARLNQIAVK
                     LGLGNGWELPEIEAKSKSKVAITRLFEPEYRRNTLLIWLAFIAISASFYFISSWTPAL
                     LEEAGMPKTQSQTVGMAISVGGTIGSLIFGFLVSRWAAKHILQAFSILAASAVVAFVF
                     AGNLGLAITLAILVGGLINGCITGLYTINPTLYAPDFRSTGVGTAIGVGRLGSIVSPT
                     LAGILLDAGWKKNELYLGAAVVLLIAAFTVHFLKQRK"
     gene            complement(15513..15848)
                     /locus_tag="PXE50_000675"
     CDS             complement(15513..15848)
                     /locus_tag="PXE50_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HDL5621609.1"
                     /translation="MVSEQRQNPEEQKSEEQKINVEVLYAYPDKYFLKKLQVPQNATI
                     QTIILLSGVLEKYTEIDLRENKVGIFSRPAKLNETVEEGDRIEIYRPLIADPKEIRRK
                     RAAEQAEKK"
     gene            complement(15838..16272)
                     /locus_tag="PXE50_000676"
     CDS             complement(15838..16272)
                     /locus_tag="PXE50_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HDL5621610.1"
                     /translation="MPIVNQSALVPYSAEQMYQLVNQYEKYPEFLSGCVSTKTLSTGE
                     NELKAELHIQKLGISQTFSTHNKMTPPYKIEMALIEGPFRHLHGAWTFTPFDEQSCKI
                     ALQLNFEFSSPIVAMVFGKVFNELTLKMVNAFKQRAKEVYGV"
     gene            complement(16327..17382)
                     /gene="modC"
                     /locus_tag="PXE50_000677"
     CDS             complement(16327..17382)
                     /gene="modC"
                     /locus_tag="PXE50_000677"
                     /EC_number="7.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum ABC transporter ATP-binding protein
                     ModC"
                     /protein_id="HDL5621611.1"
                     /translation="MLKLKLLQQLGNLTLNVNLDLPNKGITAIFGRSGAGKSSLINLI
                     AGLSTAQAGFIELNGQVLFDSQNGINLPPEKRNIGYVFQEHRLFPHYSVEKNLKYGYK
                     RSDSADFLQIVELLGIAPLLNRYPASLSGGEKQRVAIGRALLSSPNILLMDEPLSALD
                     LPRKQELLDYLDKLSARLEIPILYVSHSLEEVVRLADHLVLLENGKVTAFDTLSAVWH
                     SSAFSAWQPNHQRISLLELPVEETLPHYNMLGLSLNAQRLWVNQLPRHQIGEKLRVTI
                     ASKEVSISLQKPTQSSIRNVLKGNVRKIETHLDRVDLAIQVENQQIWSTISLWSFNEL
                     AIQPEQEVYLQIKSVSL"
     gene            complement(17369..18061)
                     /gene="modB"
                     /locus_tag="PXE50_000678"
     CDS             complement(17369..18061)
                     /gene="modB"
                     /locus_tag="PXE50_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HDL5621612.1"
                     /translation="MLNFTPQELNAIVLSLKVASIAVVLALPLAVWVAWLLARKQFWG
                     KNLLNGIMHLPLVLPPVVIGYLLLISMAKRGVIGQYLWEWFHFSLSFSWKGAVLASMV
                     MAFPLMVRSIRLAFEAVDPKLEQAARTLGAIPLKVFFTLTLPLSFSGIIAGGVLGFAR
                     SLGEFGATITFVSNIPNQTQTIPAALFTFIETPDGEMAAARLCLVAILISLIALFCSE
                     WLAERQKRYAQT"
     gene            complement(18245..19000)
                     /gene="modA"
                     /locus_tag="PXE50_000679"
     CDS             complement(18245..19000)
                     /gene="modA"
                     /locus_tag="PXE50_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL5621613.1"
                     /translation="MKALKKLAITMALTLSGTAFSQEITVFAAASMTNVLQDIQQDFE
                     KAYPQDKITFSFASSSVLAKQIEQDAPADIFISADQKWMDYVAEKQPEKVKHRRNLVR
                     NELVLIAPTESNIEPKAIQAVDFAKELANSYLSVGDPNHVPAGKYAKKALSHYQLWES
                     VEPRLARAKNVRDALSFVERGESPLGIVYSTDAKVSNKVKVVAVFPPESYGEIVYPAA
                     AVSEKASAATFLDFLKTPKAKAKFEAAGFYPVN"
     gene            complement(19021..19782)
                     /locus_tag="PXE50_000680"
     CDS             complement(19021..19782)
                     /locus_tag="PXE50_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5621614.1"
                     /translation="MNLIGFYTLAYKECRRILRIWRQTLVPPVITTTLYFLIFGTLIG
                     GRIGEMNGVGYTQFIAPGLIMMTAITASYVNTASSFFLSKFTRDFEEMLISPLSTHNI
                     IWGYVTGSILRAGLAATLVMCVAMVFVSFEIYSVAIIVLTLLLTIIAFALGGVINAVF
                     ARSFDDVGLIPTFVLTPLTYLGGVFYSISLLPEFWQTVSKFNPIVYMINGLRYGFLGI
                     SDVPLGYTFAVLTSLCIGLYIIAYSLIQRGVGLRS"
     gene            complement(19784..20692)
                     /locus_tag="PXE50_000681"
     CDS             complement(19784..20692)
                     /locus_tag="PXE50_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5621615.1"
                     /translation="MKALELIDLVKTYPTGVKAVKGINLVVEQGDFYALLGHNGAGKS
                     TTIGIISSLVNKTSGSVKVFGYDLDTQKVELKHQIGLVPQEFNFNQFEKVIDVLVQQA
                     GFYGIPRSEALVRAEKWLKLLDLWEKRTHLTRELSGGMKRRVMIARALMHNPKLLILD
                     EPTAGVDIELRRSLWDFLRDLNNQGTTIILTTHYLEEAETLCRHIGIIQHGELIENTS
                     MKALLAKLESEVFVLDLQNSEQNQPLVIQNYPHKWLDENTLEVNVKRQQGLTNLFSQI
                     SAQGAEVLSMRNKSNRLEELFINMAQ"
     gene            complement(20698..22755)
                     /gene="dnaX"
                     /locus_tag="PXE50_000682"
     CDS             complement(20698..22755)
                     /gene="dnaX"
                     /locus_tag="PXE50_000682"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HDL5621616.1"
                     /translation="MSYQVLARKWRPQRFSEVVGQQHVLSALENSLREDRLHHAYLFS
                     GTRGVGKTSIARLFAKGLNCVNGITAEPCGECANCKAIEEGHFIDLIEIDAASRTKVE
                     DTRELLDNVQYKPTVGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQ
                     KLPITILSRCMQFHLRALEQSQIARHLEFILNAENIPFEPLALEKLAKAAQGSIRDSL
                     SLTDQAIAMSNANITLAIVSQMLGLIDDNQPLELVQATAQADGEKAMAIIEQIAAKGV
                     DWQQLLSDVAEVLHKIAMLQLVKTPTTEETLVHFLAKQIPPEDVQFFYQLILNSKKEL
                     PFAPEQRAGVEMAILRALAFHPKQAEKIATVAVEKVTQPNHSVSAVTTAKPQNQISQL
                     RENFEQNQQKTVTVANTTTAVESIAQPPQAVDTAISPSAPATLSPAMAALEARKKLQA
                     QQANLAQTEKKKPELKAPQVIAKKSANQTASLQERFISLAENQHKAVLQVSKKTESAP
                     KSVEDEDYRWTWLNPELENQADSAKPSDIKQAILQERTPELVAKTIHLSCQQDKWCDI
                     ANSLNLGGFSRQIALNSYLAEQNEQHLALVLKPNMAHLDNPESRKNLEAALAEKGYSY
                     ELTIGDNSEQQTPLEIRRAIFKQLTEAAKSALLNDEKLMLLRNAFDAQIDESTIRAVA
                     ETE"
     gene            complement(22846..23385)
                     /gene="apt"
                     /locus_tag="PXE50_000683"
     CDS             complement(22846..23385)
                     /gene="apt"
                     /locus_tag="PXE50_000683"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HDL5621617.1"
                     /translation="MNQLDLIKSSIKSIPDYPKAGIIFRDITSLLEVPTAFQATIDAI
                     VAEFKDKGITKIVGTESRGFIFGAPVALALGVPFVLVRKPKKLPREVISQSYTLEYGE
                     DTLEIHKDAVSANDNVLVIDDLLATGGTIDATAKLIRRLGGNVEHAAFVIWLPELGGK
                     ERLEKEGVKSFSLVSFEGH"
     gene            complement(23513..24463)
                     /gene="lpxM"
                     /locus_tag="PXE50_000684"
                     /gene_synonym="msbB"
     CDS             complement(23513..24463)
                     /gene="lpxM"
                     /locus_tag="PXE50_000684"
                     /gene_synonym="msbB"
                     /EC_number="2.3.1.243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249087.1"
                     /note="LpxM is lauroyl-Kdo(2)-lipid IV(A)
                     myristoyltransferase, an enzyme characterized in
                     Escherichia coli and involved in biosynthesis of the form
                     of lipid A found in that species and some closely related
                     species; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase"
                     /protein_id="HDL5621618.1"
                     /translation="MTRITAQDGYTHKFLWSFLHPKYWGVWLGVLGLVILAYVPVRIR
                     DKLSAFVGKMAYRYLKQKNKKGYHRAKVNLRYCFPDWSEKKREEVVEKMFITVAQTML
                     AIGETAIRPASYLQKRCEFTGFENVVKAKESGKNVIMLVPHTWSIDMAGVAMFSLGYP
                     MTSMYNPHRNALVDWLWNITRERLGGRMHTRQNGIKAFLADVRKGDVGYFLPDEDFGE
                     ELSVYADFFATEKATLPGLNKMARVANAEVIPMFSIYNAEKAKYEMEILPPLEFSGDP
                     IQSAREMNRVIEYFVEKNPEQYVWILRLLKTRRNREDIYL"
     gene            complement(24904..25587)
                     /locus_tag="PXE50_000685"
     CDS             complement(24904..25587)
                     /locus_tag="PXE50_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit E"
                     /protein_id="HDL5621619.1"
                     /translation="MEREQQIPVTNIDVAPKQSSVWKTIFADGVWKNNGALVQLLGLC
                     PLLAVSNSVTNALGLGLATMFVLICTNITVSLFRKITPHDIRIPIYVMVIATVVTAVQ
                     LLMNAFAFPVYQSLGIFIPLIVTNCIVIGRAEAYASKNEVKFSAFDGFSMGLGMTFSL
                     VVLGALREIIGNGTLFSGLDLLLGDWAKALRIDVLHIDSGLLLAILPPGAFIGLGVIL
                     AVKNIIDKR"
     gene            complement(25596..26228)
                     /gene="rsxG"
                     /locus_tag="PXE50_000686"
     CDS             complement(25596..26228)
                     /gene="rsxG"
                     /locus_tag="PXE50_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxG"
                     /protein_id="HDL5621620.1"
                     /translation="MNTSKITLNYALILGFIALLCTAVSTGVYLLTKGKIDDVTAMQQ
                     RKLLEEVVPKSHFDNDVLATCKLVQLENAPYLNRIYVAKKSENLTAYLVQGTAPDGYS
                     GDIVLLMGIEPNGNILGVRTLEHKETPGLGDKIETRVSDWILSFTNQLFSLENEADWN
                     VKKDGGKFDQFTGATITPRAVVNHIRQSAKWVVTELAQNPTMFNQFKACK"
     gene            complement(26228..27283)
                     /gene="rsxD"
                     /locus_tag="PXE50_000687"
     CDS             complement(26228..27283)
                     /gene="rsxD"
                     /locus_tag="PXE50_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxD"
                     /protein_id="HDL5621621.1"
                     /translation="MFKMVSSPHTHSSNLTANFMLWVIAMMLPAFGVQLYYFGYGVLI
                     QTLLAVSLAIVIEIGIAKLRKKTTAFYLADLSGILTALILAMSIPPYAPYWLVLIGVI
                     VALLLAKHSYGGLGQNLFNPAMVGYALLLVSFPVQMTAWIVPIELLSEPPTFRDAISL
                     IFYGVTSDGFSIHQLVNSVDGIAQATPLDSMKSSLAKSGFDAVMNTPIFNGLFATGWL
                     QLNLAFLFGGLVLIYKRIIHWQIPVAMLATFAFFSGFTELFSQQSHLHFVSHFFSGAM
                     MFGAFFIATDPVTASITPRGKLIFGGLVGLLVYLIRYYGNYPDAIAFSVLLANICVPL
                     IDHYTQPRLYGTKLDNR"
     gene            complement(27329..27964)
                     /locus_tag="PXE50_000688"
     CDS             complement(27329..27964)
                     /locus_tag="PXE50_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HDL5621622.1"
                     /translation="MFSELIPALPWSFLFIQDLIGTIVFAISGAIAARQHKMDIFGMF
                     ILAFVTGVGGGTLRDMMIGSTPVFWMKQPIYVLMITLAVVITAIFRNQISRKSWQTGL
                     LVFDAIGLGVFTVIGVQKGLDFGLHPLICVALGGVTGCFGGLIRDILRNEVPIILQKE
                     VYVTASLIGGVIFVAANSVGLESDWVYLATVFTVIIIRLLAIRFNLNLPRL"
     gene            complement(27957..30251)
                     /gene="rsxC"
                     /locus_tag="PXE50_000689"
     CDS             complement(27957..30251)
                     /gene="rsxC"
                     /locus_tag="PXE50_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxC"
                     /protein_id="HDL5621623.1"
                     /translation="MSNPNLVIERIRQNKETGKLWDFPGGIHPMENKSQSNSKPIRTL
                     NLPKFFYVPLVQHSGWAGELLVKVGDVVLKGQPLTKGDHFRQLPVHSPTSGRVIGIEP
                     YVSAHASGLPEITVIIETDGKDKWVERQPIEDFLSLTSDQIIQKVYQYGIAGLGGAVF
                     PTATKLSLADKRCKLLVINGAECEPYITCDDRLMQDFTADLIEGIRILRYVLRPEEVV
                     IAIEDNKPHAIQALETALKGSNDMFVRAIPTKYPSGASDQLIQVLTGLEIPAGKRTIE
                     MGIVMHNVGTAFAVKRAIIDDEPLIERVVTLTGDKIRNKGNVWARLGTPIQHLLEQVD
                     YQADKRFPVFLGGPMMGFILPALQAPITKTANCLIAPDHFEYAPPEPERSCIRCSSCS
                     DACPVGLLPQQLYWFARAEDHDKSKEYHLDACIECGVCAYVCPSYIPLIQYFRQEKAK
                     IEEIEEKARKAEEAKIRFEAREARLQKERDARTARISQAAEKRREEVANAGGVDPVKA
                     ALERLKAKKAVETVQEIPAEVQVKPNGEPDNSDLMAQRRARRLAKQAEQAVEKSENVT
                     NALIGANNDLPLQSMNETASDKSVGANNYSPEAESEDPRKAAVAAALARAKAKKQAQQ
                     AVEKSENITNAVIGVNNDLPLQSMNETVSDKSVGANNHSPETESEDPRKAAVAAAIAR
                     AKAKKQAQQAVEKPEDIANAVIGVNNDLPLQSMNETTSDKSVGANNHSPKTESEDPRK
                     AAVAAAIARAKAKKAAQQEKSNNV"
     gene            complement(30238..30855)
                     /gene="rsxB"
                     /locus_tag="PXE50_000690"
     CDS             complement(30238..30855)
                     /gene="rsxB"
                     /locus_tag="PXE50_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxB"
                     /protein_id="HDL5621624.1"
                     /translation="MLDLPIIAYILIAIAVIALIFGAVLGYSSIKLKVESDPIVDQID
                     ALLPQSQCGQCGYPGCKPYAEAIANGDVITKCVPGGQPLVVNLAELLGVEVPPMEGMA
                     EPEMKVAFVIEDLCIGCTKCIQACPVDAIIGTNKAMHTIIPDLCTGCELCVAPCPTNC
                     IEMRPIKPTTQSWNWKFDQDLIIPIVNTTELQRKLVTGGGKNEQS"
     gene            complement(30855..31436)
                     /gene="rsxA"
                     /locus_tag="PXE50_000691"
     CDS             complement(30855..31436)
                     /gene="rsxA"
                     /locus_tag="PXE50_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007525505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxA"
                     /protein_id="HDL5621625.1"
                     /translation="MVDYILLVISTALINNFVLVKFLGLCPFMGVSKKVETAIGMGLA
                     TTFVLTVASLSAYLMETYLLEPLNAQFLRTLVFILVIAVIVQLTEMIVHKTSPTLYRL
                     LGIYLPLITTNCAVLGVALLNVNLANNLVESVLYGFGAAAGFSLVLVLFAALRERLAA
                     ADVPRPFQGASIALITAGLMSLAFMGFTGLVKL"
     gene            complement(31751..32236)
                     /locus_tag="PXE50_000692"
     CDS             complement(31751..32236)
                     /locus_tag="PXE50_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621626.1"
                     /translation="MAGLLPPYFKKKNSDHYKDAVKQFGKEQVDEVIAQCDELESWVK
                     EMPTKQLIMYVGCFHTFNKLSQSKAYVQENFPNVLENPFLFQTLSAASHNELKINRGY
                     KFKEKMLDEFYNLIELSEKDDEEYSEEEVKLPLWKKIYYVFIIFGIIMFIYRVINWLL
                     F"
     gene            complement(32264..>32625)
                     /locus_tag="PXE50_000693"
     CDS             complement(32264..>32625)
                     /locus_tag="PXE50_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621627.1"
                     /translation="SLFTIHYSLFTIHYSLFTIHYTDTRYNKNGQGAVSERNIIDAKN
                     RFKASHPYAKIISCVRGSETYVTRPAKANATTKSVKEKQSQPQESSSLSSMLLGAAVT
                     AGVGFVANKWFSKKDNT"
BASE COUNT         9117 a         7436 c         6981 g         9091 t
ORIGIN      
        1 agcatgaaga tatagaattt atatatgatg agaaaatatc tacagaacca cctccttata
       61 tggaggaaga aaaatttcaa aaaataataa tgaggttttc aaaagatata aaaataatga
      121 tgcacaacca cataaacttc atagaatctg acagatttgc ggaatggatt cttgaaaagg
      181 cttgtgttcg ctctaaaaca ttaaccagct tttatggcga caagtctgtt ataagggccg
      241 ttccaccatt ggattggtca ggaaaatata aatataccaa aataggattt agattatgct
      301 acgatttgta gggggatata tgaagaaata cagtaatgat tctcttataa atagtattgt
      361 tatatctaaa ttaaaagcag gatggaaaat tagaaaagga aagaaacata atatattaat
      421 tgccccaaat tctaggagat tagcgatacc tagtaccccg agtgatatta atgcgtataa
      481 aaactttaga tctaaactaa accatcttat tgctttttaa ttagtatcaa tgccctatta
      541 tctacttgta tagggcattt cccttcatcc ttgacccaaa tcaactttcc ccttgatatg
      601 tggaaaacca caataccttg ccgttccctc tccgccttag aatacctttg ttatttttaa
      661 atttgtgggg gaaatatgga tttaagcaaa cgttcctttt tgaaagagct ttccgccttg
      721 acggtggggg cgagttttgt gccgttgcaa tcggcccagg cgtttatgcc ggcttggcgt
      781 gagggcgatg agaacaaacg ctatgcgatg ctgattgatt tgcgtaaatg tatcggctgt
      841 caagcgtgta ccgtgagctg ttcggtggag aacgccacgc cgttgcacag tttccgcacc
      901 acggtgcgtc aatatgaaat caccaacggc acgcaggtgg tgaacaatgt ggtgttgcct
      961 cgtttgtgta accattgcga tcaaccgccg tgtgtgccgg tctgcccggt gcaggcaacc
     1021 tttcaacgta aagacggtgt ggtggtgatt aacaatgagc agtgcatcgg ctgtggttac
     1081 tgcgtgcaag cctgcccgta tgatgcccgt tttatcaatg aagagaccaa aaccgccgat
     1141 aaatgcacct tctgcactca ccgtttggag gtaggtctgc tgccggcgtg cgtggaaagt
     1201 tgcgtgggcg gggcaagggt gattggcgat ttgaacgacc cgaaaagtca aatttcccaa
     1261 ctttatcaag cccacaaaga tgatttgaaa gtcctgaaac cggaggccgg caccgtgcca
     1321 cacgttttct atgtggggct agacgatgat gcctttgtga gcaaaattga cgggcaacca
     1381 atgctctgga cgggggaggc gtaaaatgat tcgtgaagta ttagtggaac cgcaacatat
     1441 cgtctggttg ccgtggattg tgcattattt cttcttcgta ggcgtggcgg caacggcagt
     1501 gtttaccgcc gtgctgtttg caaaaaaatc actgaaaccg accgcttgcg agctggcggc
     1561 ggtgacggta gccttgattg gctcgattgt cgcccctgtg gcattgactg ccgacctgca
     1621 ccaaccgagc cgtattctgc atttctacac cgattttgcg tggcgatctc caatggcgtg
     1681 gggagcgatt atcctgcccc tgttcagcgt ggcggtagcg ggttattttg tgctggcatt
     1741 ggctcaccat acccggccga acctgccgaa atggttagcg tggctacagt tgccgatact
     1801 gcaaaatcaa ggcttgcttt gggcattccg cctgtttgcc acactcaccg ctatcggcat
     1861 tatcggctac accgtgcttg aaacctacca aaccggcaca agaaccttat ggcacagtgc
     1921 gtggctgctg ccgattatgc tcttttctgc gtgggcggtg gcattggggc ttacccaagc
     1981 ggtctgcaaa atgctgttcc acacccaaac caacacgggg ctatggacaa aactctgcct
     2041 gattttaacc gcactttcgc ttgtcggact agcattcagt agtccacaag ccacacaaga
     2101 ttttgcccag ctcttcaatg gctcaatcac cgcttacctt gtcggcattt tctggctaat
     2161 tgccctcatt tgcaattttt ctgccaaaaa ccaccgcttg caatggctcg gcgtgcttgc
     2221 cctcatcgct ttcggctggc tactccgctg ggtactggtg atccaagtcc aaaccattgc
     2281 caaaaccaat gccttgcaaa atccatatca tttcgattgg acagccgtcg atggtggttt
     2341 ggggattgtc tcgatttttg ggctaacggt gctagtaagt atcgtggtat ggcaactgat
     2401 tttaataatt tgtgggggaa gaaaaggtga acaataaacg cagaaatctg ttgaaaggcg
     2461 ggctggcact tggtggggcg gcggcgtttg gggccgggta ttcgccgaag gtgtcggaga
     2521 ttgccaaagg ggtgatgcac ggcacatcgg gcgagaaaac ccgtgatgca attcacggta
     2581 attcgctcac gccggagtat caggtaaaag acggcaaact gctcagcaat cctgagcaaa
     2641 ttgtgtgcaa tacacagtgt atgggctgtt ggacgcagtg tggcattcgg gcgagggtgg
     2701 atttgaacac caaccaagtg attcgcattt cgggcaatcc gtatcacccg ctttcctccg
     2761 acaaaaccct gccgttcggt atgccgattg ccaaggcgga actgttgctg gcgggcgaaa
     2821 gtggcattga aaatcgctcc accgcctgtg ctagaggggc ggcgttcttg gagggggtga
     2881 acagcccgta tcggattacc caaccgttga aacgggtcgg aaaacggggc gaaggcaagt
     2941 ggcagaccat cagctttgag cagttggtgg aggaaatcat caatggtggc aacctatttg
     3001 gtgaaggcga agtggagggc ttgaagacga tccgcaatct ggtcgatccg attaacccga
     3061 aacagcctga tttgggaatg aaagcaaacc agcttttagt tacttttgcc ggccccgaag
     3121 gtcgtcagcc gattttgcaa cgctttgccc aaaagagctt cggcacgatc aacttttcca
     3181 accacggggc ttattgtggc gctgcgtacc gtgccggttc gggtgccttt atgaaagatt
     3241 ttgacaacca acaacacgcc aagccggact gggatcacgc tgaatttatt ctgtttatcg
     3301 gcacgtctcc ggcacagtcg ggcaatccgt ttaagcgtca ggctcgccag cttgccaaac
     3361 gccgccctga tgacaatttc agctatgtgg tggtttcccc tcgtttggag atgacctcct
     3421 ccctcgccac ccaaaacaac cattgggtgc cgattaagcc cgagggcgat ttggcgttgg
     3481 taatgggaat gttgcgttgg attatcgaaa acgagcgttt caatgctgac tacctctccc
     3541 gcccaagtct ggcagcgatg gaaaatgccg gccacgtcag ctatgccaat gcgtcacatc
     3601 tgattatttg cgaaccgaac cacccgaaat tcgggcaggc gttgcggatt agcgatctgc
     3661 aagatgtgca actcgacccc gaagagaaag tggaagaaaa cctgattgtg gtaaaagatc
     3721 aggcaagcgg cgaactcatt tcagcaaaag attgcttaca agcggtcatt tttgtcgaac
     3781 aaattgcaaa actgcttgat ggctcggaag tgttggtgaa atcctcaatg cagttgctga
     3841 aagaggcgac acaagagaaa acccttgccg aatatagcga catttgtggc gtgccggtgc
     3901 aaaccattga aaacttagcg aaaaaattca cttcgcacgg tcataaagcc aatgccatca
     3961 ctcacggcgg cacgatgcac agcaccggtt tttataccag ttgggcgatt ttgttgctga
     4021 atgcaatggt cggtaacctc aacaaaaaag gcggaatggc agtagccgca ggcaaattca
     4081 aagatttcgg ggacgggcct cgctacaatt tagcgaactt cccgaatgaa gtgaagccaa
     4141 aaggcacgaa ccttgcccgc agtaaaaagg cgtaccaaaa ttcaagcgaa tttaagcaga
     4201 aagtgacgaa gggcgaaaat ccgtatccgg cacaaggggc gtggtatccg ttcaccggcg
     4261 ggcaaactac cgagatgttt acctcaatgg tgcagggcta tccatacttt gcgaaagcgt
     4321 ggatcaacca tatggcgaac cccgtttacg gcttaaccgc tatgaacccg attgcgttgg
     4381 agaaattaaa agatccgaaa attctaccgc tctttgtctc tattgatgct tttatgaacg
     4441 aaaccactgc actgacggac tacatcgtgc cggacaccca caactttgag agctggggct
     4501 tttcaacggc gtggggcggt gtgcctcaac gcaccagcac cgcacgccac ccgattgtgc
     4561 cgtccaaaaa cgccaaaact gccgaaggcg acaccatctg tatggagaat ttcgtgattg
     4621 cggtggcgaa aaaaatgggc ttgccgggct ttggcgaaaa tgcgattgcc gatttagaag
     4681 gcaaccgcta tccgctccac cgtaccgaag attacttcct acgggcggca gcgaacattg
     4741 cctttgccgg tgagaaacct gcaccggacg ccagcgagca agatctgctg ctcaccggcg
     4801 tgcaacggat tatgccgaaa attgaacaaa cgctaaaagc cgaagagcga ttaaaagtgg
     4861 cgaatgtgta ttgcaaaggc ggacgttttg ccccacacga aagtgcgtgg aaagaggaga
     4921 atatggagtt ccagtggaaa aactgcctgc aaatttggaa cgaaaacgtg tataaagccc
     4981 agcaccacag caacggtgaa cactattggg gctgccctcg ttatatgtcg ccacgttttg
     5041 cggacggctc cacgctggag cagcactatc cgcagtcgga atggggcttt aaactgattt
     5101 cgtttaaatc gaacattatg agcagtatta ccgccccact gttgcgtctg ctctcgatca
     5161 agcctgaggg cttagtggcg atgaaccgtt tagatgcgga agaaaaaggc attaaacacg
     5221 gcgatgtggt gaaactcagc accccaaccg ccggcttgac ggtgcagatt gtggtgttgg
     5281 acggtatcgc ccgaggcaca atcggcatcg aacacggcta cggtcataaa cagattgggg
     5341 caagttccta caccattgac ggcgtggaaa ttccagccaa cccgatgatc gccaaaggga
     5401 ttaacctcaa cgacctcggc attatcgacc acaccaaagc ggtcaaatcc ccgtgggtag
     5461 attgggtctg tggctcagcg gtgagaaatg gcattccggc gaaggtagag aaattagcct
     5521 agccgaacaa gcggttggtt ttgcagaaaa atgtgcaaaa tcgaccgctt ttattgatgt
     5581 aagggacact gttccttatg caaaccagca ttgcagagcg taaaaaatca tactctgcat
     5641 tttaatttat tttggagaac ctatgacttt tgtcaaaaaa acagcactga gcctgattgc
     5701 aacggcactt ttcgctacat caagttttgc cgctgagcag agccaatacc aacatattcg
     5761 taatgcaacg gcgaaaattg aatatgccgg caagacgttt ttggttgatc cgtatttagc
     5821 ggagaaagat cgctacttac cgccgaatgc gaaaaaacgt aatccgacct tggatatgac
     5881 tgtgagcatt gatgaagtgt taaatggcgt ggatgcggtg atcgtaactc acactcacca
     5941 cgctcactgg gacgatgtag cacaacaacg tgtgccgaaa aatctgccga tttttgtgca
     6001 gaatgccggt gatgcccgtt taatccgttc acaaggcttt accgatgtgc gtgtggtcgg
     6061 caaagatacc ccgtttgaag gcgtaacctt aacccgaact cgtggccagc acggcaccga
     6121 tgcgatgtat gcgaacccga aaattgccga aatggtcggc gatgcgatgg acgtagtgat
     6181 gaaagcggaa ggcaaaccga ccgtctattt ggtgggagat accatttgga accacgaaat
     6241 cgaacattcg ttcaacactt acaaaccaga ctttgtggtg ctgaatgccg gctgtgccaa
     6301 actaccaaac tttgaaggca gcccgattat gtgtaccgaa gatgtttcca aagcacacaa
     6361 aatcgctcca caagcgaaaa tcttaactgt gcatatggac gccctgccac aaacctcaat
     6421 cagcagtgat cagatgcgtg attatgtaca aaaagaggga ttaaatcgtg taactgtgcc
     6481 gaaaaacggt gatgtgatta agttctagta gctaaactaa cattaccaaa atggtttaag
     6541 tagcaataaa tagcgaagcg ggttaagcca tcaagcctta acccactttt accaaccata
     6601 gtatatagtt ttagatataa ttatcttctg tatttacctg ccattgcttg gtaaaccgca
     6661 ttctcgttgg tcaaaatcgc atattttgca tttaaaatcg ccaactgaga attaagctcg
     6721 gtattcagtg cggtaatcca ctcacggaac tccgacaccc cttgttcata acggttttta
     6781 tagtatgaac tgatacgttt atttttcgca ttggtatctt gaaggatttt taacgagctt
     6841 ctcgactgcg tataactgta ataataacgg tcaatttcat ttaaggctga ggtaattttt
     6901 tgctcatagt ttaaacgggc agtcacataa tccgtttcag aaatttttac gttattttta
     6961 acccgattcc aatctaagaa cggtaaatcc aatttaatta agccgttacc cacagggtta
     7021 tctgccacat tgccgatatt ggttgcacta ccggtaatag aaccaccgat ggttaaggtt
     7081 gggaaccagc ttttctcggt tgcggttaag gttttaaatg cactttgtaa gcgttgtaac
     7141 gagcctacta catcagggcg attagcaatg gctgacactg gcacatttaa atctacccct
     7201 tgcaatttca cgctcataat attcgggtaa cgaatgttaa gcggagtatt tggctgaaca
     7261 tttaacaaat tgcgtaatgt ttgctcggca attttttggt tggttttcag atcaattaca
     7321 ctatttctgg cgtttaagac cgcttgttga gcctgatcaa ccgctaaact atcaatcgca
     7381 ccggcattca ttttgttagt taaaatacgg ctgatttgct cataatggcg aatgctctct
     7441 tcggtaatac gaatcgcatc acgatagtaa gctaactggt agtaagtagt cacaaccgca
     7501 ttaataatag ataaacgggt agcttttaag tcttcaatgg tggctttatg cgtccattct
     7561 gccgcactgg cggtatcggc taaacgtcgc cataaatcca cagtataact taaattaaat
     7621 gcagcttgag ctgcggttgt tgaaacaccg gtcgaaacat tatttgaaga agccgaacct
     7681 aaacctttag ccgcagaaac agaacctgaa ccactaaagg ttggcactaa atttgcccct
     7741 actaaattag cgttatacaa ggctttattg actgcaattc cgcttttggc taaatcaagg
     7801 ttatttttga tggctaaatc aaccacacgg tttaattccg catccgtata gccttgccac
     7861 cattgctcgt taatttgata ttgtttggta atttcatcat agctttgata ggtttgctgt
     7921 gcttgttgca aagtcccgtc attgctcata ttccctgtgg tacaagccgt tacggttaga
     7981 gccaacgcca cagaaaatgc taattttgaa agtttcatta catttccttt tgaaaataaa
     8041 gaggggaaaa tgggcgtatt ctacccaaaa acagattgcc tttccagtta aatgaacaac
     8101 tgttcattta attatttaac aaatcagtaa tcaaatgctg atgacgaatt tgttgcgaac
     8161 ctaagctcaa acgctcggca attaaaatcg cttttagctc tgccaatgcc tgttggaaat
     8221 catcattaat aatcacataa tcgaactcat tgtaatggtt catttccgac accgcctctg
     8281 ccatacgttt ggcaatggtt tcagcggaat cttgcccacg cccgattaaa cgtttttcca
     8341 attctgtttt tgacggtggc aaaataaaaa cggttttcac attcggcact ttttcccgaa
     8401 tttgtctagc cccttgccag tcaatatcca aaaagacatc aatgccctgc tctaggctac
     8461 gttcaatcat cggcaatgat gtgccgtaat aattgccaaa cacctccgcc cattctaaaa
     8521 aatacccttg ctcaatcagc tgcttaaact catcgtgcga agtgaaataa taatgcacgc
     8581 cgtcctgttc tgccggacga ggctgacggg tagtgtgtga aatcgaaagc tgtacttccg
     8641 aacggggtaa atccgccaac aaggcgttaa ttaaggaaga ttttcctgct ccacttgggg
     8701 cagaaataat ataaagattg cctaaactca ttatttgtat atacctattt gattttggga
     8761 atagggcgaa tgatgattcg cccctacatt tcataggaat aaataaaaaa taatggacaa
     8821 ctttcattgt ccattacaca aaattatcta cgtgccaaag gctgaacgaa ggtaatgcct
     8881 aaatcccaag gctgctcaat ccacgtttct tgtggaatat caatcacata atcatcaacc
     8941 aacggtgcac cgtgcggttt cgcaaacacg gttacaaaac gagctttcgg gtacattctg
     9001 cgaatttctt ttgccgtgtt gccggtatcc actaaatcat ctaccacaat aaagccttcg
     9061 ccatcggtat cggctgcgtg taacacattt aactcacctt ggctatcgtg atcgtagctg
     9121 gcaatgcaca ctgtttctac gtggcgaata cccaactcac gtgctaaaac ggctgccgga
     9181 aacaagccgc cacggctcac cgcaataatc cctttccact gtgtggcagg taataaattt
     9241 tctgccaact tgcgagcgtg catatggaac atatcccacg tcacgacata tttttcattt
     9301 gtgtattttt cactcataga aacaacctaa tataaaattg ggggctaccc cgatataaaa
     9361 aattgcacta ggataacccg aaaatgcttt tttcgccatc atttcattta tttttttgtg
     9421 ccggcagcta cgcaatcgta tgcttagcac aaaaaaccaa cactaaaata gcttttctaa
     9481 agtgaaaaag acttccttgt tttggcgaga gtaaaaatca gcaatattgc tgtcaatttt
     9541 ttgataacgg aaattcagct tcggcacaat gccctgccaa tgccaagtgc ggttccaaac
     9601 cgctaaattg gcttgatatt ccgtgtctaa ccgcttatag ccaaacaaat agtgcttgtc
     9661 ggcaaaatat cgcttgccaa agccgatact tgcctgcgtt gcccagcgtt cgccttgaaa
     9721 aaccgccccc actcgagcca gccacttatt cgagctttgt gctttttccc gtgcaatttc
     9781 acgcacgccg tctaaatttg caaaaaaccg cccatttttg accgcttgcc actgcacacc
     9841 gccactgagt tggtgctgat agctgttata acggcttgcg gttagctcct caaaataccg
     9901 tttttgcaaa tgggtaaaac tccccgacac caaccattgc gaattaaggt aacgcaaacc
     9961 gttgagtgtt gccccaaatt gaacattata acggctactc cccagccaat tttgctcaat
    10021 aaaaggcgaa aaagtcagcc gataagcgac ggtgcggtag ctataattcg gcgaaacgga
    10081 tacggattgc tcacggtaat ctcggttatc ccaatagtaa atcccgctat aattgagcgt
    10141 taaaccgaca aaatgattgc ctttcacgtt gtgcaattta ctcaacccta agccataacg
    10201 cacgcctttt gctgattgtg gcaaactgtc tgcatttttg cggaaaatcc gcccatttac
    10261 attcacaatc ggcgaagatg aggcattatt cacgttatct gtttgggtat attgcagata
    10321 aaaatcgggc tgccacgcct cattttcagc aatttggact tgagtattgc gggcaatttt
    10381 agcaagttcc ggcggtaaat gggcttgaat agccttaaat tcctgctctg ccgcacgaaa
    10441 ttgctgatct tctgccaaaa tcaacgccaa atcaaaacga gggtaaacca aactcggggg
    10501 cttagctaac agttggcgat agtgaaaaac tgcggtttga tgatcttttt tcgcataggc
    10561 aagtgcggct tgcgcatagt gccacaacaa cgggtcaaaa ttttcagttt gcggataacg
    10621 gcttaaaagc ggttcaagcg ttgcccaatc ttggctgaga atcgcttggt taatttgctg
    10681 ttcaacattc tgattgactg aatacgcagg ctgataagcg gtcggttttt gtgaattttt
    10741 tacaacattt tgctcaaatt taaccgcttg cggctgacgc tcaaaggaaa tcgggtcagt
    10801 gttgtgttca atcacctttt ctgcccatac aacggggctg aacagcgaaa ataaaagggg
    10861 atattttttc ataaagataa agaaaattgg taggggcgga cctatatgtt cgcctctacg
    10921 ggatttatca ctctctcccc ttgtgggaga gggttattag aagctgtaaa ttgaaatcta
    10981 aactattgtg tcttatggta tctacaagca atatcaagac aaatgccgtt taatttttcg
    11041 ttaaacggca ttgaacgtta gaaaaggtta tttttggata tcgccacgag tgccggcaag
    11101 tccaaaatta ctcacttccc cagtaagatt tgcttttgtc tgaatttcac cggcaatttc
    11161 ctctgcattt ttaccgaaaa attcgactgt atattttcca gaaaggttta aaggattatt
    11221 gccatgtact gttgaagaaa tctgagtatt attaatcgtc ccctcttcta atacgattaa
    11281 gtttccaaat tctccctcaa ctctacctga accggtacgc ttagagaaat taacattata
    11341 ggttagatca ccaccattaa aacctttagc tccatcgtgg ttaaatgctt ttcctgaata
    11401 tgttgcagta ccctctgttg gtaatttctc tgttttcaat cctttaactg taactgttcc
    11461 atcaacttta tcaatataat taccgttttc ccagccattt ctttgaactg cttgtgctgt
    11521 tactacagaa tatggctgat tatataaata actctgtgtt ctgactgtga ctttaccctc
    11581 aatagtttct ttactattac caagttttaa gccgtaattt gtatcatcaa taccttttgc
    11641 tttaataata gctataggat ctacttcttt ttctgctgct aaacgctccg cttccgcttt
    11701 ctctttcgcc gctttttccg ccgctaaacg ttctgcttcg gctttttctt tcgctgcttt
    11761 ttccgccgct aaacgctccg cttccgcttt ctctttcgcc gctttttccg ccgctaaacg
    11821 ttctgcttcg gctttttctt tcgctgcttt ttccgccgct aaacgctccg cttccgcttt
    11881 ctctttcgcc gctttttctg ccgctaaacg ttctgcttcc gctttctctt tcgccgcttt
    11941 ttccgccgct aaacgttctg cttcggcttt ttctttcgct gctttttccg ccgctaaacg
    12001 ttccgcttcg gctttttctt tcgctgcttt ttccgccgct aaacgttctg cttccgcttt
    12061 ctctttagct gctttttctg ctgctaaacg ttctgcttct gctttctctt tcgctgcctt
    12121 gtcttttgct gctttttctg ctgccgcttt atcggtttgt tgctgagtag tttgcggttt
    12181 agtattcggt tttgccacat tgtttgagct actgcccgaa ccaccactac tacacgccgt
    12241 taaacccaat aaaatcaaac tggctaaagt tacttttttg atagacataa aatgttcctt
    12301 ttgtaagata aacaaaaata gatgtgtata aaacacacgc atattgtaca aaaaaaaaac
    12361 aactcgtcat caagtacttt ttaagatttt tttgttaaat ttctcctaaa tattctacaa
    12421 tgtcagaggt ctatatcagc ttgaatacaa gcggttattt tttcttaaaa ttttacaaaa
    12481 ggggcttatt atgtctgaaa tctcaacgct cgcaccgcag ctactttggc agtggtttga
    12541 taaagcctgt gctattccgc acccgtctta ccacgaaaat gaactggctg aatttattgt
    12601 gaattgggca aaatcgaaaa atttctttgt tgaacgtgat gaagtgggta atgtgttaat
    12661 ccgtaaaccg gcaactaaag gtatggaaaa ccgccaaact gtcgctctgc aagcccatct
    12721 tgatatggtg ccacaagcca ataccggcac ggttcacgat ttcactaaag atccgattca
    12781 gccttatatt gacggcgaat gggtaaaagc caaaggcaca acattggggg cagataacgg
    12841 cattggattg gcttcgtgct tggcggtgtt ggatagcgat gatttagccc acccaaccat
    12901 tgaagtgttg ctcacaatga ccgaagaagc cggtatggaa ggggcgattg gtttacgccc
    12961 gaactggcta accgccgata ttatgattaa caccgacacc gaagaaaacg gggaaattta
    13021 catcggctgt gcaggtgggg aaaatgtgaa tgtgacactg ccaattttct tggtgcctca
    13081 tcagcaagat agtgcagtaa ccgttacgct taaaggccta aacggcgggc attcgggctg
    13141 tgatattcac accacccgag cgaatgcgat taaagtgttc gcccgcattt tggaacaagc
    13201 ccacaacgaa gtggaattcc aaattgcaga aattcaaggc ggttcggtgc ggaatgccat
    13261 tccacgagaa gcccacgcaa ccttggtttt ctctgcaaaa aatcagcaaa aattaaccgc
    13321 ttgtttaagc caaaccgccg aacaagtaaa agcagaactc aaaattgccg agccaaactt
    13381 ccaattttta attgaagaag ctcaactgcc tgagcaagcc tttgaccttg ccagcactgc
    13441 tcgagtaatc catttcttaa atgtgatgcc aaatggtgtg gtgcgtaata gcgatgtggt
    13501 ggaaaatgtg gtggaaacct cactcagtat tggtgtgctt aacaccgaag cgagtgaggt
    13561 gaaagcgacc attcttgccc gctcattaat tgagggcgga aaagaggaaa ttcgcagtaa
    13621 aatccgctca ttaaccgcat tagtgggagc agaagtggaa ttttcgggca actacccggg
    13681 ctgggagcca aacccaaatt ccaaaatcac gccattaacc aaagcgattt atgatgaaat
    13741 tttaggttat gaatctcaaa ttaaagtgat tcacgcaggg ctagaatgtg gcttaatcaa
    13801 caaaatctac ccgaatatgg attttgtctc gattggacca actattctca acgcccattc
    13861 tccggacgaa aaagtgcata ttccggcagt ggagatttat tggaaactcc taaccaaact
    13921 acttgaacaa gcacctgaga aataaattta atcaaaaaaa ttatataatc ttgccccgta
    13981 attaattgaa taaaacctca attaattacg gggtagctct tattttctct gttttaaaaa
    14041 atgtaccgtg aaagcagcaa ttaataagac gactgctgca cctaaataaa gctcgttctt
    14101 tttccagccg gcgtctaata aaatacctgc aagagttggg gaaacaattg agcctaaacg
    14161 ccctacaccg atggcggtgc ctacgcccgt gctgcggaaa tccggtgcgt atagggttgg
    14221 gttaatggta taaagcccgg taatgcagcc gttaattaat ccgccaacca aaatggctag
    14281 tgttatcgca agccctaaat tgccggcaaa cacaaaggca accacagcag atgcagccag
    14341 aatactgaat gcctgcaaaa tatgttttgc cgcccagcga ctgactaaaa agccgaaaat
    14401 taacgagccg attgtaccac caactgaaat tgccattccc acagtttggc tttgggtttt
    14461 aggcattccg gcttcttcta atagtgccgg agtccaagag ctgataaagt aaaatgaggc
    14521 tgaaattgca ataaaggcaa gccaaattag caacgtattg cggcgatatt caggctcgaa
    14581 taaacgggta attgccactt tgcttttact ttttgcctca atttcaggaa gttcccagcc
    14641 gtttcctaag cctaatttaa cggcaatttg atttaaacga gctttagcat tcaccgggtg
    14701 ttttgaaatt aaaaattcca ccgattcggg caatacaaag aataataaaa cgaataccgc
    14761 accggttaaa atcgacccaa cgaggaaaac cgcacgccag ccatattctc cttgcaataa
    14821 caccgcagac attccgccca gcattgcacc aatcccaaag cctgaggcat aaattgcaat
    14881 cgctaagcca cgccattttt ggctggagta ttcactcact agcacattag tgccggttaa
    14941 aatggcggct acgcctaaac cggttaaaac acgccataca ccaatttcaa acgcagaagt
    15001 agcgaaataa gttaggagca ttcctaacgt ggctaagcct gtgccgatta aaagcaacgg
    15061 gcggcgacca aatttatcag caagtggtga aagaaagagt gagcctatcg ccataccgaa
    15121 taaaccggca ctcattaagc tgccgatggc tgcaccgtct aactgcaatt cttctcggat
    15181 gcttttggcg gtaaaggcga gtgccattaa atcaaagccg tccagcatat taagtaacac
    15241 cgtaagccca accactaacc attggaatga agtcattttg ttatgagcaa ttttttgacg
    15301 aatatccata agctccctct gcatcaaaat tgataaaatt ttatttagag tgaactatag
    15361 aaagttgatt aaatataatc aaactcaaaa tttacataaa atttatgaaa gattttcata
    15421 tttaatcaaa ggagggaatt tatagcagga atggcgaggg agaaaataga tagggcgaat
    15481 aattattcac ccctagattg aataggagaa agctatttct tctccgcttg ctcagccgct
    15541 cttttgcgtc tgatttcttt cggatcagca attaacgggc gatagatctc aattctgtcg
    15601 ccttcttcca ccgtttcatt cagttttgcc gggcggctaa aaataccgac tttgttttca
    15661 cgcaagtcaa tttcggtata tttttccaac acgccggaga gcaaaataat agtttgaatg
    15721 gtcgcgtttt gcggtacttg cagttttttc agaaaatatt tatcagggta agcataaagc
    15781 acctcaacat taattttctg ttcttcactt ttttgttctt ctggattttg acgttgttca
    15841 gacaccatac acctcttttg cacgttgttt gaaagcattt accattttta aagttaattc
    15901 gttgaacacc ttgccgaaca ccattgctac aattgggctg gaaaattcaa aatttaattg
    15961 cagggcaatt ttgcaacttt gctcatcaaa gggggtgaat gtccaagctc cgtgtaaatg
    16021 gcggaaaggc ccttcaatta atgccatctc gattttatag ggcggcgtca ttttattgtg
    16081 ggtactgaaa gtttggctaa tgcctaattt ctgaatgtgt aactctgcct ttaattcatt
    16141 ttcgccggtg ctaagggttt tggtactcac gcagccggat aaaaattcgg ggtatttttc
    16201 atactgatta acaagttgat acatttgctc ggcactataa ggcacgaggg cagattgatt
    16261 aacgattggc ataatgtctc ttttgggaat taacaagcgg tcatatttta gcgtaaattt
    16321 gcaagcctat aaagaaacgc ttttgatttg aagatagacc tcttgctccg gttgaatcgc
    16381 taattcatta aaagaccaaa ggctgatcgt actccaaatt tgctgatttt cgacttgaat
    16441 tgccagatca acccgatcta aatgcgtttc tattttccga acattgcctt ttaacacatt
    16501 acgaattgag ctttgagtcg gtttttgtaa gctgattgaa acctctttgc tggcaatagt
    16561 tacccttagc ttctcgccta tttgatggcg ggggagttgg ttcacccata atcgctgtgc
    16621 gttcaagctc aagccaagca tattatagtg gggaagtgtt tcttccaccg gtaattcaag
    16681 caggctaatt cgctgatgat ttggctgcca agcggaaaat gccgagctgt gccaaaccgc
    16741 tgaaagggta tcaaatgcgg ttactttgcc gttttccaac agcacaagat gatctgccaa
    16801 tcgaactact tcctctaaac tgtggctgac atacagaatc ggtatttcaa gccgagcgga
    16861 taatttatct aaatagtcca gtagctcttg cttacgaggg agatcgaggg cagataatgg
    16921 ttcgtccatc agcaaaatat tcggtgagct taataacgcc cgcccaatcg ccacacgttg
    16981 tttttcgcca ccggaaaggc ttgccggata gcgattaagc aaaggggcaa tgcctaacag
    17041 ttccacaatt tgcaaaaaat ccgcagaatc cgaccgcttg tagccatatt ttaagttttt
    17101 ttccaccgaa taatgaggga aaaggcgatg ctcttgaaac acatagccaa tgttgcgttt
    17161 ttcaggtggt aaattgatgc cgttttggct gtcaaacagc acctgaccgt ttaattcgat
    17221 aaagccggct tgagcggttg aaagccccgc aattaaatta atcaggctgg atttaccggc
    17281 accggaacgc ccgaaaatag cggtgattcc tttattcggc aaatcgagat tgacattgag
    17341 cgtcagattg ccgagttgct gaagaagttt aagtttgagc atagcgtttt tgcctttctg
    17401 ccagccattc cgaacagaac agggcaatga gtgaaatcag aatcgccacc aagcacaaac
    17461 gggcggcagc catttcgcca tcgggggttt caataaaggt gaaaagggcg gcaggaatgg
    17521 tttgggtttg gttgggaatg ttggagacaa aggtgatggt tgccccaaac tcccccaaag
    17581 agcgggcaaa acccagcacg ccaccggcaa taatgcctga aaaagagagc ggtaaagtga
    17641 gcgtgaaaaa cacttttaac ggtattgctc caagcgttct ggcggcttgc tccaatttag
    17701 gatcaactgc ctcaaaggct aaacggatag aacgcaccat tagcggaaac gccatcacca
    17761 ttgaggcaag cactgctcct ttccacgaaa aactcaagct gaaatgaaac cattcccaca
    17821 aatattgccc gattacccct cgtttcgcca tcgaaataag caataaatag ccaatgacaa
    17881 ccggcggtaa caccagaggg agatgcataa taccattgag cagatttttt ccccaaaact
    17941 gtttgcgggc aagcagccac gccacccaca cggcaagcgg taatgcaagc actacagcaa
    18001 tggaggcaac ttttaggctt agaacaatcg cattgagttc ttgtggggtg aaattaagca
    18061 taatctaaaa ctatttggtt ataagcttac cctcgcccct tgtgggagag ggatagattt
    18121 ttcttcgttc agaagaaaaa tcagggagag ggggaatatt ttaaacgcta tttgccctct
    18181 ctctgaaaaa tatgtctgaa cgacatattt ttctgtctct ctcccacaag gggagagagt
    18241 aaatttaatt tacaggataa aacccagctg cctcaaattt cgcttttgct ttcggggttt
    18301 tgagaaaatc taaaaatgtg gcggcagagg ctttttcact gactgccgca gcagggtaaa
    18361 caatttcgcc gtagctttcc ggtgggaaaa cggcaaccac tttgacttta ttcgacactt
    18421 tagcatcggt ggaatagaca atcccaagtg gggattcgcc tcgctcgaca aaagagaggg
    18481 catctcgtac attttttgcc ctcgctaaac gaggttcaac actttcccat aattggtaat
    18541 gactaagggc ttttttggca tatttgccgg caggaacgtg gtttgggtct cccaccgata
    18601 aatagctgtt tgctaattct ttggcaaaat cgaccgcttg tatcgctttt ggctcaatgt
    18661 tactttcggt aggtgcaatt aatactaact cgtttctgac taaattgcgg cgatgtttaa
    18721 ctttctcagg ttgtttttcg gcaacataat ccatccactt ttggtcggcg gaaataaaaa
    18781 tatctgccgg tgcatcttgc tcaatctgct ttgctaatac cgatgatgaa gcgaaggaga
    18841 acgtgatttt atcctgtgga taggcttttt caaaatcctg ctgaatatct tgtaacacat
    18901 ttgtcattga agcggcagca aacacggtaa tctcttgtga aaaggctgtg cctgataacg
    18961 ttaatgccat tgtaattgct agttttttta atgctttcat tttcataacc tcacaattag
    19021 ttaagaacgc agcccaaccc ctcgttgaat taaggaatag gcaataatat acaagccgat
    19081 gcaaagtgaa gtaagcactg caaaagtata acctaacggc acatcgctga taccgagaaa
    19141 gccatatctt aagccgttaa tcatataaac gatcgggttg aatttagaca ccgtttgcca
    19201 aaattcaggc agtaatgaaa tagagtaaaa tacgccgcct aagtaagtta agggagtaag
    19261 cacaaaggtt ggaatcagcc ccacatcatc aaaggagcgg gcgaacaccg cattaattac
    19321 gccacctaac gcaaaggcaa tgattgtcag caacagggtt aagacgataa tcgcaaccga
    19381 gtagatttca aacgagacaa acaccattgc cacgcacatt actaaggttg cggctaaacc
    19441 tgcacgcaaa atactgccgg tgacataacc ccaaataata ttatgggtag agagtggcga
    19501 aatcagcatc tcttcaaaat ctcgggtaaa tttactcaag aaaaatgaag aggcggtatt
    19561 cacataagag gcggtgatgg cggtcatcat aattaagccg ggtgcaataa attgggtgta
    19621 acccacgcca ttcatttccc cgattcgccc accaatcagc gtgccgaaga ttaaaaaata
    19681 gagcgtggta gtaatcaccg gtggcactaa agtttgtcgc caaatccgca aaatgcggcg
    19741 gcactctttg taagctaagg tataaaatcc gattaaattc attttactga gccatattga
    19801 taaatagttc ttccaagcgg tttgatttgt ttcgcatact tagcacctca gccccttggg
    19861 cggaaatttg cgaaaacaga ttggttagcc cttgctggcg ttttacattc acttcaaggg
    19921 tgttttcatc aagccattta tgcgggtaat tttgaatcac aagcggttga ttttgctcag
    19981 aattttgcaa atctaacaca aatacctcac tttccaattt ggcaagcaag gctttcattg
    20041 aggtgttttc aattaattcg ccgtgttgaa taatgccgat gtgacggcat agggtttccg
    20101 cctcttctaa atagtgggta gtgagaataa tagttgtgcc ttgattgttt agatcccgca
    20161 agaaatccca caatgagcgg cggagttcaa tatccacccc tgcggtaggt tcatctaaaa
    20221 tcagtagttt tggattgtgc attaaggctc gggcaatcat cacccgacgt ttcattccac
    20281 cagaaagctc acgggtgagg tgggtgcgtt tttcccatag gtcgagcaat ttcagccact
    20341 tttcggcacg tactaaggct tcactgcgag gaatgccgta aaacccggct tgttgcacta
    20401 gcacatcaat cactttttca aactgattga aattaaactc ttgtggcact aagccgattt
    20461 gatgctttaa ttcgactttt tgggtgtcta aatcatagcc aaacactttc acgctgccgc
    20521 tggttttatt taccagtgag ctgataatgc caatagtagt agatttacct gccccgttat
    20581 gcccaagtag ggcatagaaa tcaccttgct cgaccacaag attaatgcct ttaacggctt
    20641 ttacacctgt tgggtaggtt tttaccaaat caattaattc taatgctttc atttgtttta
    20701 ctcagtttcc gccaccgctc gaatggtcga ttcatcaatt tgtgcatcaa aagcgttgcg
    20761 aagtaacatt aatttttcat cgttaagcag agctgatttt gctgcctcag ttaattgttt
    20821 gaaaatggct cgccgaattt caagcggagt ttgctgttcg ctattgtcac caatggtcaa
    20881 ttcgtatgaa tagccttttt cggcaagggc agcttctaaa tttttacgtg attccggatt
    20941 atctaagtga gccatattcg gctttaacac caatgcgagg tgctgttcat tttgttccgc
    21001 taaatagcta tttaaggcga tctgacggga aaatccgcct aaattgagtg agttggcgat
    21061 gtcacaccat ttatcctgct gacaagataa atgaatggtt tttgccacta attcaggggt
    21121 gcgttcttgc aaaatcgctt gtttaatatc agaaggtttg gcactgtctg cttgattttc
    21181 taattcagga ttgagccacg tccagcgata atcttcatct tccacacttt taggggcgga
    21241 ttcggttttc tttgaaactt gcagtacggc tttgtgctga ttttccgcca agctgataaa
    21301 ccgctcttgc aatgaagcgg tctgatttgc cgattttttt gcaataactt gaggggcttt
    21361 tagctcaggc tttttttttt cggtttgagc taaatttgcc tgctgtgctt gtagcttttt
    21421 gcgggcttcg agggctgcca ttgccggtga aagagtcgca ggagcagacg gcgaaatagc
    21481 ggtatctact gcctgtggcg gttgagcaat gctttcaacc gctgtggtag tattggcaac
    21541 agtaaccgtt ttttgctgat tttgctcaaa attttctctt agctggctaa tttgattttg
    21601 tggttttgct gtcgtaaccg ctgaaaccga atggtttggt tgtgtaacct tttccactgc
    21661 aactgttgct attttttctg cctgtttagg gtggaaagcc aacgcacgca aaatcgccat
    21721 ttcaacaccg gcacgttgct ccggtgcaaa aggcaactct tttttactgt tgaggattaa
    21781 ttgatagaaa aattgcacgt cttcgggcgg aatttgtttt gccagaaaat gcactaatgt
    21841 ttcttcggtt gtaggtgttt tcactaattg caacattgca attttgtgta acacttctgc
    21901 cacatcgctt aataattgtt gccaatcaac gcctttcgct gcaatttgct cgatgatcgc
    21961 cattgctttt tcaccgtcgg cttgggcggt tgcttgcact aattctagtg gttgattatc
    22021 gtcaatcaac cctagcattt ggctgactat cgcaagcgta atattggcat tactcattgc
    22081 aatggcttga tcggtgaggc tgagagagtc tcggatacta ccttgtgctg cttttgccaa
    22141 cttttctagt gccaaaggct caaacggaat gttctctgca tttagaataa attcaagatg
    22201 acgggcaatt tgcgattgct ctaatgcccg cagatgaaat tgcatacagc gagagaggat
    22261 cgtaatcggc agtttttgcg gatcagtggt agccagcaag aatttgacat attcaggcgg
    22321 ctcttcaagg gtttttagta aggcgttgaa actatgacga gagagcatat gcacttcgtc
    22381 aattaaataa accttaaaac gcccaacggt gggtttgtat tgaacgttat caagtagctc
    22441 acgggtgtct tccactttag tacgagaagc agcatcaatt tcaatgagat cgataaaatg
    22501 cccttcttca atcgctttac aattcgcaca ttcaccgcaa ggctcggcgg tgatcccgtt
    22561 tacacagttt aagcctttgg cgaataaacg ggcaatagag gttttaccca caccacgagt
    22621 gcctgaaaac aggtaagcgt ggtgcagtct atcttctctt aagctgtttt caagagcaga
    22681 taaaacgtgt tgctgaccaa ctacttccga gaagcgttgc ggtctccatt tacgggctaa
    22741 aacttgataa ctcattgatt tttctattca atttggaaat cacaagcggt catctttccg
    22801 aaaaattttg caaaatttta gcaaaaagcc accgcttgtt ccccattaat gaccttcaaa
    22861 gctgactagg ctaaaggatt taaccccttc tttttccaaa cgctctttac cacctaactc
    22921 aggcagccaa atcacaaagg cagcgtgttc tacgttacca cctaagcgac gaattagttt
    22981 tgcagttgca tcaatagtac caccggttgc gagtaaatcg tcgatgacca atacattatc
    23041 attagcactc actgcgtctt tatgaatttc tagcgtgtct tcaccatatt caagcgtgta
    23101 agattgcgaa atcacttcac gtggtaattt tttcggttta cgaaccaaca caaaaggcac
    23161 gcctaacgct aatgcaacag gggcaccaaa aataaacccg cgagattctg tgccgacaat
    23221 tttagtaata cctttgtctt taaattctgc aacgatggca tcaatggtgg cttggaatgc
    23281 agttggcact tctaaaagtg aagtgatatc acggaagata atccctgctt tcggataatc
    23341 tggaatggat ttgatagaag atttaattaa atctaattgg ttcattgttt gacctacgtg
    23401 taataaaaaa ataactggaa aactctatag aaaaacagca gaaatttcaa ggagaaattg
    23461 ataaccttac gtttgatagt acagcttact tttcagtttc cttttcccta tattatagat
    23521 aaatatcttc cctgtttcgt ctggttttaa gcaaacgtaa aatccaaaca tactgctcgg
    23581 ggtttttctc cacaaaatat tcaattactc ggttcatttc tcgggcggat tgaattgggt
    23641 ctcctgaaaa ttcaagcggt ggcaaaattt ccatttcata ttttgctttt tccgcattat
    23701 aaatcgagaa cattgggatc acttccgcat ttgccactct tgccatttta tttaagcccg
    23761 gcaaagtggc tttttcggtg gcaaaaaagt cggcatacac acttagctct tcgccgaaat
    23821 cttcatcggg cagaaaataa ccaacatcac ctttacgcac atcggctaaa aacgctttaa
    23881 tcccattttg acgagtgtgc attcgcccac ctaaacgctc acgggtaata ttccacagcc
    23941 agtccaccaa cgcattacgg tgtggattgt acattgatgt catcggataa ccgagcgaga
    24001 acatcgccac ccccgccata tcaatcgacc aagtatgtgg cactaacata atcacgtttt
    24061 taccgctctc tttggctttc accacatttt caaagccggt aaattcacac cgtttttgta
    24121 aataagaggc cgggcggatt gcagtttcgc caatcgccaa catggtttgt gctaccgtga
    24181 taaacatttt ctcgaccact tcttcacgct ttttctcact ccaatcggga aaacagtaac
    24241 gcaaattcac tttagcacgg tggtagcctt ttttattttt ctgcttgaga tagcgatacg
    24301 ccatcttacc cacaaaagcg gataatttat ccctaattcg caccggcaca taggctaaaa
    24361 tcactaatcc taatacacct aaccatacgc cccaatattt cgggtgtaga aaagaccata
    24421 ggaatttgtg cgtatagccg tcttgggcgg taattcgtgt cattctataa ttcctcatta
    24481 tttgtcactt tctttgcttc gccaaagaaa gtaaccaaag aaaggcaacc ctacttcacc
    24541 gctatcttcg cttggtttga atttgcttaa cgaaaaaatt ccaaactcgc cgcttcgctg
    24601 ctcaaacaag gaatttttcc tacaaattca aagtcgttcg ggcggttcag aagggaaccc
    24661 ggcagagcat cattttgcaa aattttccaa aaaaatcacc gcttgtatgg tcggatcggg
    24721 ttcccttctg agttgcccga acgacttgaa atttttagga aaataactcg agcgagagcg
    24781 aagcgaacat cagggttatt tttcgttaag aaaatttcaa ccaagtgagg atagcaacaa
    24841 agcagggtgt gctttctttt ggttactttt ctttgcacaa gcaaagaaaa gtgacataac
    24901 acatcatctc ttatcaataa tattcttcac cgccaatatc accccaagtc caataaaagc
    24961 ccccggaggt aaaattgcca gtagtaaacc tgaatcaata tgcaatacat caatgcgtag
    25021 ggcttttgcc caatcgccaa ggagtagatc taagcctgaa aacagcgtgc cgttgccaat
    25081 aatttcacgc aacgcgccta gcaccacaag gctaaaagtc attcccagcc ccattgaaaa
    25141 gccgtcaaaa gccgagaatt tgacctcatt ttttgaggca taggcttctg ctcgtccaat
    25201 cacgatacag ttggttacaa tcagcggaat aaaaatcccg agcgattggt aaacagggaa
    25261 agcaaaagca ttcattaaaa gctgtactgc cgttaccacc gttgcaatta ccatcacata
    25321 aatcggaatc cgaatatcgt gtggagtgat tttccgaaac agggaaaccg tgatattggt
    25381 gcaaattagc acaaacattg ttgccaagcc tagtccaagt gcattggtta cgctgtttga
    25441 aaccgccagt agtgggcaaa gccctaataa ttgcaccaaa gcaccattat ttttccacac
    25501 accatcagcg aaaatcgttt tccaaacgct ggattgtttc ggggcaacgt caatattcgt
    25561 cacagggatt tgttgttctc tttccatttc tccccctatt tgcacgcttt aaattgatta
    25621 aacattgtcg ggttttgagc cagctctgtc accacccatt tcgcactttg gcggatatga
    25681 ttgaccaccg cacgaggtgt aatagttgca ccggtaaatt ggtcgaactt gccgccatct
    25741 ttttttacat tccaatccgc ttcgttttct aaactaaaaa gttgattggt aaaagataag
    25801 atccaatccg acactcgggt ctcaatttta tctcccagcc ccggagtttc tttatgctca
    25861 agggtgcgaa cgcctaaaat gttgccgttc ggctcaatcc ccatcaatag cacaatatcg
    25921 ccggaatagc cgtccggagc cgttccttga actaggtaag cggtcagatt ttccgatttt
    25981 tttgcaacat aaatacggtt caaataaggg gcattttcga gctgaaccag tttgcaagtc
    26041 gccaacacat cattatcaaa atggcttttc ggcacaacct cttccaataa tttgcgttgt
    26101 tgcattgcgg ttacatcatc aatcttgcct ttggtaagca ggtacacacc ggttgaaaca
    26161 gcggtgcaaa gcaaggcaat aaagcctaaa attaaggcgt aatttaaggt aatttttgag
    26221 gtgttcatta tctgttatcc aattttgtgc cgtataatct cggctgcgta taatggtcga
    26281 ttaacggtac gcaaatgttt gccaataaca ctgaaaatgc aatcgcatca gggtaatttc
    26341 cgtagtagcg gattagataa accaataatc ccaccaagcc accgaaaatc agttttcctc
    26401 ttggggtaat ggaggctgtt accgggtcgg tcgcaataaa aaatgccccg aacatcatcg
    26461 caccgctaaa gaaatggctc acaaaatgca agtgcgattg ttggctaaac agctcggtga
    26521 atccactaaa aaaggcaaaa gttgccaaca ttgctaccgg aatttgccaa tggataatcc
    26581 gtttataaat caacaccaaa ccgccgaata agaacgcaag gttcagttgt agccaaccgg
    26641 tcgcaaacag cccgttgaaa atcggcgtat tcattaccgc gtcaaaacct gattttgcaa
    26701 ggctgctttt catactatca agcggggtag cttgtgcaat gccatcaaca ctattaacta
    26761 gctgatgaat actaaaacca tcgctagtta ccccgtaaaa aatcaacgaa atcgcatcac
    26821 gaaatgtcgg tggttcactt aataactcaa tcggcactat ccacgccgtc atttgcaccg
    26881 ggaaagaaac caacaacaac gcatagccaa ccattgccgg gttaaataga ttctgcccca
    26941 agccaccata actgtgtttt gccaataata acgccacaat cacgccaatc aacacaagcc
    27001 aataaggagc ataaggcgga atcgacatcg ccaaaatcaa ggcggttaaa atacctgata
    27061 agtcagccaa atagaaagcg gttgtttttt tgcgtaattt tgcaatcccg atttcaatca
    27121 caatcgcaag gctaacggca agcaacgttt gaatcagcac accatagccg aaataataaa
    27181 gctgaacccc aaaagcaggt aacatcatcg caatcaccca cagcataaaa ttcgcagtga
    27241 gattgctcga atgagtgtgg ggggaactga ccattttaaa catctataaa acctttttag
    27301 taaaaaattg caaaaaaatg accgcttatt aaagtctcgg caaattcaaa ttaaagcgta
    27361 ttgccagcag gcggataata attacggtga acacggtggc aaggtaaacc caatcgcttt
    27421 cgagcccaac tgagtttgca gccacaaaaa tcacaccacc gataaggctg gcggtcacat
    27481 acacttcttt ttgcaaaatg atcggcactt cgttgcgtaa aatatcacgg attaagccac
    27541 caaaacagcc tgtcacaccg cccagagcca cacagatcag tgggtgcaag ccgaaatcca
    27601 agcctttttg cacgccaatc acggtaaata cgccaagccc gatggcatca aacaccagca
    27661 agccggtttg ccaacttttg cgggaaattt ggttgcggaa aatagcggta atcaccactg
    27721 caagggtaat catcagcaca tagatcggtt gtttcatcca aaacaccggc gtggagccaa
    27781 tcatcatatc ccttagcgta ccgcccccga ccccggtcac aaacgctaaa ataaacatac
    27841 cgaaaatgtc cattttgtgc tggcgggcag caattgcccc cgaaatcgca aacacgatag
    27901 tgccgattaa gtcctgaata aacaggaacg accacggcaa tgccggaatt agctcgctaa
    27961 acattgttgc ttttctcctg ctgagcggct tttttcgctt tagctctggc gatggcggcc
    28021 gcaacggcgg ctttgcgtgg gtcttcgctt tccgttttgg gcgaatggtt attcgcccct
    28081 acagatttat ccgatgtagt ttcgttcatt gattgtaggg gcaaatcatt atttacccca
    28141 atcacagcat tggcaatatc ttccggtttt tcgaccgctt gttgagcttg ttttttcgct
    28201 ttagctctag cgatagctgc tgcaacggcg gctttgcgtg ggtcttcgct ttctgtttcg
    28261 ggcgaatggt tattcgcccc tacagattta tccgataccg tttcgttcat tgattgtagg
    28321 ggcaaatcat tatttacccc aatcacggca ttggtaatat tttctgattt ttcgaccgct
    28381 tgctgtgcct gttttttggc tttggctcgg gcaagggcag ccgcaacggc ggctttgcgt
    28441 gggtcttcgc tttctgcttc gggcgaatag ttattcgccc ctacagattt atccgatgca
    28501 gtttcgttca ttgattgtag aggcaaatca ttatttgccc caatcaaggc atttgtaaca
    28561 ttttccgatt tttcgaccgc ttgttctgcc tgtttggcta aacgtctggc tctgcgttgt
    28621 gccattaaat cgctgttatc aggctcgccg ttaggtttta cctgtacttc tgccggtatt
    28681 tcttggactg tttcaaccgc ttttttcgct ttcaggcgtt caagagccgc ttttacagga
    28741 tcaacaccac ctgcatttgc cacttcttca cggcgttttt ccgccgcttg gctaatgcga
    28801 gcagttctgg catctcgttc tttttgtaag cgagcttctc tcgcctcaaa gcggatttta
    28861 gcctcttccg ctttgcgggc tttttcctca atttcctcga tttttgcttt ttcttggcgg
    28921 aaatattgga ttaacggaat gtagcttggg caaacgtaag cacaaacgcc acactcaatg
    28981 caggcatcta aatggtattc tttcgattta tcgtgatctt ctgcacgggc aaaccaataa
    29041 agttgctgtg gcaataaccc caccgggcaa gcatcggaac agcttgaaca gcggatacaa
    29101 ctacgctccg gttcaggtgg tgcatattca aaatgatcag gggcaatcaa gcagttcgca
    29161 gttttggtaa tcggggcttg caatgcaggc aaaataaagc ccatcatcgg tccgcctaaa
    29221 aacaccggaa agcgtttatc ggcttgataa tctacctgct ccaacaagtg ctgaattggc
    29281 gtgcctaatc ttgcccacac gttccccttg ttgcgaattt tatcgcctgt cagcgtcact
    29341 acccgttcaa tcaaaggttc atcatcaata attgcccgtt taaccgcaaa cgccgtgccg
    29401 acattgtgca tcacaatgcc catttcaata gtgcgtttgc cagccggaat ctcaagtccg
    29461 gtcaacactt gaatcagctg atcagaagct ccggagggat atttagtcgg gatcgcccgc
    29521 acaaacatat cgttcgagcc ttttaaagcg gtttctaaag cttgaatagc gtgcggtttg
    29581 ttgtcttcaa tcgcaatcac cacttcttcc gggcgaagca cataacgcag aatgcgaata
    29641 ccttcgataa gatccgcagt gaaatcttgc attaagcgat cgtcacaggt gatgtaaggc
    29701 tcacattctg ccccgttaat caccagtaat ttacagcgtt tatccgccaa acttaatttt
    29761 gttgcggttg ggaataccgc accgcctaaa ccggcaatgc catattggta aactttttgg
    29821 ataatttgat cgcttgttag gcttaaaaaa tcctcaatcg gctggcgttc cacccattta
    29881 tctttaccat cggtttcaat aatcaccgtt atttcgggca aacctgaggc gtgagcggaa
    29941 acataaggct caatcccaat cacccgcccg gaggttgggc tgtgtacggg cagttgacgg
    30001 aagtgatcgc ctttcgtgag cggctgccct ttcaatacca catcgccgac tttgactaat
    30061 aattcccctg cccagccaga atgttgaacc agtggcacat agaaaaactt cggtaaattt
    30121 aaggtgcgaa ttggcttgct gtttgattgg gatttatttt ccatcgggtg aataccgccc
    30181 gggaaatccc acagtttacc cgtttcttta ttttggcgga ttcgctcaat cactaaatta
    30241 ggattgctca tttttgcctc cgccggtaac taattttctc tgcaattcag tggtattcac
    30301 aatcggaata attaaatctt ggtcaaattt ccagttccaa gattgggttg tcggtttaat
    30361 tggtcgcatt tcaatacagt tggtcgggca aggggcgaca caaagttcac agccggtgca
    30421 aagatccgga ataatggtgt gcattgcttt attcgtgccg ataatcgcat caaccgggca
    30481 agcctgaatg cacttagtac agccaatgca gagatcttca atcacaaaag ccactttcat
    30541 ctcaggctct gccatacctt ccattggcgg cacttctacc ccaagcaatt cggcaagatt
    30601 caccactaaa ggttgtccac ccggcacaca tttagtgatc acatcaccat tagcaatcgc
    30661 ctcagcataa ggcttacagc ccgggtagcc acattgaccg cattggcttt gtggtaaaag
    30721 ggcatcaatt tgatcgacaa tcgggtcgga ttcaactttc agtttaatcg aggaatagcc
    30781 taaaaccgcc ccgaaaatca gtgcgatcac agcaatagcg ataagaatat aagcgataat
    30841 tggcaaatca agcattagag tttcaccaat cctgtaaagc ccataaaggc aagcgacatc
    30901 aagcctgcgg taatcagagc aattgatgct ccttggaacg gacgaggcac atcagcggca
    30961 gccaaacgct cacgcagagc cgcaaataaa actaacacca gcgagaaacc ggcagcggct
    31021 ccaaaaccat aaagaacaga ttccaccaag ttattggcta aattcacgtt taataatgcc
    31081 acccctaata cggcacagtt ggtggtaatc agcggtaaat agatcccaag caagcgataa
    31141 agtgtcgggc tggttttatg cacaatcatt tccgttaatt gcacgatcac cgcaatcact
    31201 aaaataaaca ccaaggtacg caaaaattga gcgtttaacg gctcaagcaa ataggtttcc
    31261 atcaaataag cagagagcga ggcaaccgtc agcacaaagg ttgtcgccaa ccccatacca
    31321 atagcagttt ccaccttttt cgacactccc ataaacggac aaagccctag aaatttaact
    31381 aagacaaagt tattaataag ggcggtgctg atgaccaaca gaatataatc gaccataaat
    31441 tccacaaaat taaatataca agcggtcaaa aacgcatttt attttgcaaa aaacagagaa
    31501 aatctgaccg tttgttaaag catctcatta aaaataaacg ttatattatc tcttgttttc
    31561 ggctcattca caataagaaa tcggaggtac ttctagtaaa cataccatat caaatatgat
    31621 cttgttacct ttgtttctat ctctggtaga atggagaatg tggggactaa gctatacagc
    31681 atgaaaggtg aaaggagctt gattttctaa gttaatccta aaaagtctca ctcctttgat
    31741 atagaggata ttagaataac aaccaattaa ttactcgata aataaacata ataatcccaa
    31801 atataatgaa aacataataa atctttttcc ataaagggag ttttacctct tcttcagaat
    31861 attcttcatc atccttttca gacaactcta taagattata gaattcatca agcatttttt
    31921 ctttgaattt atatcctcga tttattttaa gttcattatg agacgctgcc gaaagtgttt
    31981 ggaaaagaaa cgggttttcc agtacgtttg gaaagttctc ttgaacataa gctttagatt
    32041 gagataattt gttaaaagta tggaaacaac caacatacat aataagttgt tttgttggca
    32101 tttcttttac ccaagattca agttcatcac actgtgctat aacctcatca acttgttctt
    32161 tcccaaattg ttttacagca tctttatagt gatcactatt tttctttttg aaataaggtg
    32221 gtaataatcc agccattttt actccacatt ggttagagat aaattaagtg ttatcttttt
    32281 tgctaaacca tttattggct acaaaaccaa ccccagcagt tacagccgca ccaagtaaca
    32341 ttgaactgag cgatgaactt tcttgtggtt gagattgctt ttccttgaca gattttgttg
    32401 tagcattagc ttttgctgga cgtgttacat atgtctcaga ccctctaaca caagaaataa
    32461 tttttgcgta tggatggctc gctttaaaac gatttttagc atctataata tttctttcag
    32521 aaacagcacc ttgcccattc ttgttatatc tggtatctgt atagtgaata gtgaatagtg
    32581 aatagtgaat agtgaatagt gaatagtgaa tagtgaatag tgaat
//
LOCUS       DANLZQ010000016        32142 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.016, whole genome shotgun sequence.
ACCESSION   DANLZQ010000016 DANLZQ010000000
VERSION     DANLZQ010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 32142)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32142)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32142
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.016"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(408..2525)
                     /gene="spoT"
                     /locus_tag="PXE50_000694"
     CDS             complement(408..2525)
                     /gene="spoT"
                     /locus_tag="PXE50_000694"
                     /EC_number="3.1.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional GTP
                     diphosphokinase/guanosine-3',5'-bis pyrophosphate
                     3'-pyrophosphohydrolase"
                     /protein_id="HDL5621628.1"
                     /translation="MYLFEPLDRIIQGYLPPEQIERVKRAYVIARDAHEGQTRSSGEP
                     YITHPVAVASIIAEMKLDQEAVIAALLHDVIEDTPYTEEELAAEFGQSVADIVQGVSK
                     LDKLKFRTRQEAEVANFRKMILAMTKDIRVVLIKLADRTHNMRTLGALRPDKRRRIAK
                     ETLEIYSPLAHRLGIEHIKNELEDLGFEAMHPQRYRVLKMAIASARGHRKELIQRIAD
                     DIRGRLEEVQIEARVYGREKHLYSIYQKMRQKDQHFHSILDIYAFRVVVDNVDNCYRV
                     LGQMHALYKPRPKRVKDYIAVPKPNGYQSLHTSMIGPHGVPVEVQIRTEDMDKMADMG
                     VTAHWRYKEGESHHNTTVQLKAQQWLQSIVELQNSAGNTAEFIDSVKSDLFSDDIFVF
                     TPKGRIVELPANATAIDFAYAVHSGIGDRCVGAMVDRNPYPLSEPLRTGQTVEIITEQ
                     GKRPNASWLNFVVSGKARAKIRQSLKNQQHDEAIALGRRQLVRAMNLRSLDELCSETI
                     QSVLDELRLSSFDELLAEIGLGNQMSNVIAQRLLGEPLLIDTDGNPENNQPLKIEGIE
                     NRLISFANCCLPIPGDEIIAHVSSGKGLAIHNACCGNVKDYATEPSNYLPVEWEIAKE
                     KAIQFETEIVLDIINEPGVLAGITSTLAKLNSNIGSINSEAREGNIYQVRVQISVENK
                     EHSELILRKLLSVKGVVKAARKQ"
     gene            complement(2635..2916)
                     /gene="rpoZ"
                     /locus_tag="PXE50_000695"
     CDS             complement(2635..2916)
                     /gene="rpoZ"
                     /locus_tag="PXE50_000695"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HDL5621629.1"
                     /translation="MARVTVQEAAEKIGNRFDLILIAARRARQLQLHTREPLVPEEND
                     KPTVIALREIEEGLITTDIMDQLENHDSIKQEAAEQEAISFLTEMSNEA"
     gene            complement(3019..3516)
                     /locus_tag="PXE50_000696"
     CDS             complement(3019..3516)
                     /locus_tag="PXE50_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HDL5621630.1"
                     /translation="MAHFYEYLEFNSDEDRENQLEVYVEVKLSTDTEEKLQAVGVQGD
                     WLVMAEPYCPDCVEIVAYFQRMAKLNPNIKVKYVARKDNQERKHFDSDEQQQAVISAQ
                     KIPTIFDIRNGKTELVLSEFPQFLKDKMAANPEQFEQLKADFRMGKFGKEVEAELLAI
                     LLNTK"
     gene            complement(3541..4563)
                     /locus_tag="PXE50_000697"
     CDS             complement(3541..4563)
                     /locus_tag="PXE50_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005825060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDL5621631.1"
                     /translation="MSVTKKRLTLSDIAELSGVSKTTVSMILNGRGNDFRIKSETCQK
                     VKEIAKKHGYRANVYAKSLQAQRTNVIGLVIPDLTNYGFALTSRTLEKLCRENGLQLV
                     IACSDDTFEGEKKAIERLLDRQVDLLITAPTHNEPTYYQNAAQYTPMLQLDRYISGLN
                     IPSITSNDTQSISMLVENIVRAYHLKEFFYLGGQLSLSPSQNRLKGFREGLEQSHLAL
                     DENWVLHQDYQPESGYQMFAQIVEKLGRLPEAVFTASFTLLEGVMRYLTEHQQMDKLL
                     TQELHLATFDDHHLLNALPFHIHSIKQDHQQIAERTFELIQQKLAQQKIDDVKVDCEI
                     LWRKSI"
     gene            complement(4603..6033)
                     /locus_tag="PXE50_000698"
     CDS             complement(4603..6033)
                     /locus_tag="PXE50_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 32 protein"
                     /protein_id="HDL5621632.1"
                     /translation="MHIFNNGKYKSLHAQSEGELNALRQTVLSDPDFYPTYHLAPETG
                     LFNDPNGLIFDGEKYHIFAQWFPYGALHGMKHWQHFITTDFQTFSKGDLLIPDELFES
                     HGCYSGGAILWQDKIVAFYTGNTRRPSDNARIPHQNIAIFDKSGKLLEKRCIIDQAPA
                     GYTEHVRDPKPYLTAEGKIRFVLGAQRENLTGTALIYEMDDLNATPRLIAELEVHNFD
                     NSNVFMWECPDLFSLGGKDLFVWSPQGKLRESHQFQNNYHATYALGELNGNRLRAEHI
                     EELDYGFDFYAPQTVENSDRILFGWVGLPDLTYPTDKYQWHSMLTLPRKLSLQNGKVI
                     QNPIVNVGELQAVEMSENFAIENLDTAYLQISVENQPLVLDFFSNEQGQKLSLRFENG
                     VLSLDRSQTEQTELMEKFGSVRHCKIEQLETIEIFFDRSVVEIFVNGGEKVLTSRFFI
                     AKRENVVKSSRPIQVKVAKVLPISVE"
     gene            complement(6138..7061)
                     /locus_tag="PXE50_000699"
     CDS             complement(6138..7061)
                     /locus_tag="PXE50_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoimidazole riboside kinase"
                     /protein_id="HDL5621633.1"
                     /translation="MSKIWVTGDAVVDLIPDGEHHYLKCAGGAPANVAVGVSRLGVEA
                     GFIGRVGNDPLGKFMREVLQAENVCTKQMILDAQHRTSTVIVGLDNGERSFTFMVNPS
                     ADQFLEIGDLPEFNQGDFLHCCSIALINDPSRSTTIEGIRRVKKAGGYVSFDPNLRES
                     LWKSLDEMKTVVNSVVAMADILKFSEEELTLLTETETLEQATQAITAQYPEKLIIITL
                     GKDGAIYHFNGKSQVVAGKALKPVDTTGAGDAFVSGLLAGLAQTPNWHDETVLVEVIR
                     KANASGALATTAKGAMSALPNKAELDAFLAE"
     gene            complement(7178..8605)
                     /gene="miaB"
                     /locus_tag="PXE50_000700"
     CDS             complement(7178..8605)
                     /gene="miaB"
                     /locus_tag="PXE50_000700"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HDL5621634.1"
                     /translation="MAKLHITTWGCQMNEYDSSKMADLLNSTHGFELTENPEDADVLL
                     LNTCSIREKAQEKVFSQLGRWKNWKKDKPNLIIGVGGCVASQEGEHIRDRAPYVDIVF
                     GPQTLHRLPEMINQIRGGKSSIVDISFPEIEKFDRLPEPKAEGPTAFVSIMEGCNKYC
                     SFCVVPYTRGEEVSRPVDDVLFEIAQLAAQGVREVNLLGQNVNAYRGETFDGGICTFA
                     ELLRLVAAIDGIDRLRYTTSHPIEFTDDIIEVYRDTPELVSFLHLPIQSGSDRVLTMM
                     KRNHTALEYKAIIRKLRAVRPEIQISSDFIVGFPGETAEDFEQTMKVIEQVNFDMSFS
                     FIYSARPGTPAADLPDNVSDDEKKERLSRLQQRINHQAMQFSRAMLGTEQRILVEGPS
                     KKDLMELTGRTETNRVVNFVGTPDMIGKFVDVKITDVYTNSLRGEVIRTEDQMGLRVV
                     ESAESVIARTRKEDDLGVGKYVVNL"
     gene            complement(8822..9322)
                     /gene="crr"
                     /locus_tag="PXE50_000701"
     CDS             complement(8822..9322)
                     /gene="crr"
                     /locus_tag="PXE50_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005702996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HDL5621635.1"
                     /translation="MGLFDKLFGSKQKESQEIKIYAPLTGEIVNIEDVPDVVFSEKIV
                     GDGVAIRPSGDTIVAPVNGTIGKIFETNHAFSIESEEGVELFVHFGIDTVELKGEGFT
                     RLAQEGQTVKVGEPIIKFDLALLEGKAKSVLTPIVISNMDEISNLSKLNGQVVAGESV
                     VLTLTK"
     gene            complement(9407..11128)
                     /gene="ptsI"
                     /locus_tag="PXE50_000702"
     CDS             complement(9407..11128)
                     /gene="ptsI"
                     /locus_tag="PXE50_000702"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate-protein phosphotransferase
                     PtsI"
                     /protein_id="HDL5621636.1"
                     /translation="MITGIAASPGAVFGKALVLKEEPIVLNTRKITESEVEAEKAKFF
                     TGREKAAAQLTAIKEKARRTLGEEKEAIFEGHLMILEDEELEEEILSYLTDNLVTADV
                     AASKVIEMQASMLAEIDDEYLKERAGDIRDIGNRLVRNILNMNIVDLGDIQDEVILVA
                     YDLTPSETAQLNLDKVLGFITDVGGRTSHTSIMARSLELPAIVGTNNVTSLVKTGDFL
                     ILDAVNNEVHLNPSEEKIANFKALQEKLNAEKEELAKLKELPAQTLDGHKVDVAGNIG
                     TIRDVEGVLRNGGEAVGLYRTEFLFMDRTQLPGEEEQFQAYKEIVEAMNGQMVILRTM
                     DIGGDKELPYLDLPKEMNPFLGWRAVRIGFTRREILDTQLRAVLRASAFGNLAVMFPM
                     IISVEEIRLLKSIVAELKDQLRAEGHAFDENLKLGIMVETPSAAVNARHLAKEADFFS
                     IGTNDLTQYTLAVDRGNEIIAHLYNPLSPSVLNLIKQVIDASHAEGKWTGMCGELAGD
                     VRATALLLGMGLDEFSMSGISVPHVKKLIRSINFADAKALADEALAQPTAADIERLVD
                     EFYQKLN"
     gene            complement(11250..11507)
                     /gene="ptsH"
                     /locus_tag="PXE50_000703"
     CDS             complement(11250..11507)
                     /gene="ptsH"
                     /locus_tag="PXE50_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003038086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocarrier protein Hpr"
                     /protein_id="HDL5621637.1"
                     /translation="MYSKDVVITAPNGLHTRPAAEFVKAAKGFASDITVTSGGKSASA
                     KSLFKLQTLGLTQGTTITISADGEDEQKAVDFLVDLIPTLE"
     gene            11768..13342
                     /gene="thiP"
                     /locus_tag="PXE50_000704"
     CDS             11768..13342
                     /gene="thiP"
                     /locus_tag="PXE50_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine/thiamine pyrophosphate ABC transporter
                     permease"
                     /protein_id="HDL5621638.1"
                     /translation="MLSTLTKTTAWFIYFSIIALYVFSLWALMDYHQNDTLFVFSDIT
                     ATVAYSLLQASLSAVISLFLGSLLARSFFYLDFKGKNLLYKTISFIWALPSLVIIFAV
                     IGVFGNSGWLAKLFQQLGWNWQFNLYGLHGIILAHCLFNIPFVMKYYTGGLQLTPSSR
                     FQLAAQLNLTGWNYIQIVELPIIKTLLPYMFMTVFLVCFTSFPIVLMLGGSPKYSTLE
                     VAIYQAVTFEFDFAKALILIGVQFVVGIGLQLVMNYISTSALKKLKQQPNRVEIWKPK
                     PTGLAKLGLQAVIFLQSFAIILPLVSVIWAGLSVSKLSERLLNPTLWQATQYSLYLSL
                     IASIFVITISYLIALEARQLLYTKAKLRYSILTAITLFPLLLPIFLLSVGLFILLMNS
                     ELSSEALLLLVGICNGLTLLPFIYPMLFSAMWNSLTSHDKLAQGLGLKGLRRWWIVEK
                     NQLIRPLVTVFALAMSSSLGSFTVIAFFGNADFSSLPYLLYQQLGSYRTEDAAVTALI
                     LMLFALLPFLFSKDKL"
     gene            13339..13989
                     /gene="thiQ"
                     /locus_tag="PXE50_000705"
     CDS             13339..13989
                     /gene="thiQ"
                     /locus_tag="PXE50_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter ATP-binding protein"
                     /protein_id="HDL5621639.1"
                     /translation="MIELDLHFTYEQMNMHFQLSVKKGERIAVVGESGAGKSTLLNLI
                     AGFEKAESQQSQLWLNQKNHLDTEVAQRPVSMLFQDNNIFPHLTVEQNIGLALVPSLS
                     LNPKQKAQVKQIATQMGIETFLQRQADQLSGGQKQRVALARTLLRDKPILLLDEPFSA
                     LDPQRRAELQQIVFDICQSRNLTLLMVTHQLSESLFLFNRVITVADGEIVSDLSPL"
     gene            14296..15710
                     /locus_tag="PXE50_000706"
                     /pseudo
     CDS             14296..15710
                     /locus_tag="PXE50_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605131.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sucrose transporter subunit IIBC"
     gene            complement(15826..16629)
                     /gene="map"
                     /locus_tag="PXE50_000707"
     CDS             complement(15826..16629)
                     /gene="map"
                     /locus_tag="PXE50_000707"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HDL5621640.1"
                     /translation="MNNIPLRNEEEIQKLRVACKLASDVLVMIAPYVKEGVTTGELDK
                     ICHEYILANGATSASLGYHGFPKSVCISLNEVVCHGIPSDDKKLKKGDILNIDVTVIK
                     DGYYGDNSMMYVVGEPSVRDKRLMAVTLESLYVGIRTVKAGVRLKEIGTAIQKYVEKE
                     GFSVVREYCGHGIGTEFHCDPQVVHYATDDGGVVLKEGMVFTIEPMVNAGKKEVRLMG
                     DGWTVKTKDRSHSAQYEHQIVVTKDGCEVLTIRDEEIAEGRISRIMHNS"
     gene            complement(16715..17380)
                     /locus_tag="PXE50_000708"
     CDS             complement(16715..17380)
                     /locus_tag="PXE50_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HDL5621641.1"
                     /translation="MNFTTYFSDENKRRSLILLSLFHIFIIAISNYLVQISFEVQVPL
                     TEFSFPTTWGTLTFPFIFLATDLTVRVFGADLARKIIFVVMFPALVISYVISVLFFET
                     QFQGFSALTEFNFFVFRIALASFAAYLVGQLLDVLVFNSLRQGKRWWLAPTCSTIFGT
                     LIDTFVFFAIAFYKSSDEYMAEHWFTIGSVDYAFKLFVSLLLFLPLYGVILNFIMKKL
                     DLK"
     gene            17573..18262
                     /locus_tag="PXE50_000709"
     CDS             17573..18262
                     /locus_tag="PXE50_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HDL5621642.1"
                     /translation="MLQLRKANERGDGSFSWLKSYHTFSFANYYDLKHIHFSHLRVIN
                     EDFIAPNHGFGKHPHDNMEILTYMLKGRVAHEDSMGNKTEVKAGEFQIMSAGTGVFHS
                     EINPDPNETLHLYQIWIIPNQKDVTPRYNQDRFAPKEGATLILSPNAEEGSFKIYQDM
                     KLWRYQYPTAKSEQLALEPNRSYWLQVVKGNLNINGVELSTSDALGIRQEKALEINTQ
                     DDVEFLLFDLV"
     gene            complement(18330..19121)
                     /locus_tag="PXE50_000710"
     CDS             complement(18330..19121)
                     /locus_tag="PXE50_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-hexose-6-phosphate mutarotase"
                     /protein_id="HDL5621643.1"
                     /translation="MNNLRIKMISPEIALAKYNELDVLEINHSKVKAKIALQGAQLLS
                     WQPKNTQQDVLWLSEIEPFQTGVAIRGGIPICHPWFGTDKKPAHGTARIQAWNLLEHT
                     SSADGIRVVLGLENQAKLEMILGEVCELYFTHLAPEPAQAALHTYFQVGDITKTEVQG
                     LATQCFDKLTNQEIEVPSPRKISENVDCIYPAQAVNFIQDFANQRTIKVEHINATETV
                     LWNPWHNTVSAMTETAYQNMVCVETARINTLLQQNETLGVRILVR"
     gene            19245..20249
                     /gene="fbp"
                     /locus_tag="PXE50_000711"
     CDS             19245..20249
                     /gene="fbp"
                     /locus_tag="PXE50_000711"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HDL5621644.1"
                     /translation="MKTLGEFIIEKQAEYPGAKGELSGILSSIRLAAKIIHREINRAG
                     LSQDILGTAGSENVQGEAQMKLDVFANETMKKALLAREDVAGFASEEDDNFVAFDNER
                     GRNAKYILMTDPLDGSSNIEVNVSVGTIFSIYRRVSPIGTPVTQEDFLQEGRKQVAAG
                     YVTYGSSTMLVYTTGNGVNGFTYDPSLGLFILSHPDLKTPTEGKYYSINEGQYVTFPQ
                     GVKRFIKYCQETDEAIKRPYSSRYIGSLVSDFHRNLLKGGIYIYPTSTVYPKGKLRLL
                     YECNPIAFLAEQAGGMATDGINPILDIKPTELHQRVPFFVGSTSMVKQAGEFMQEFAK
                     "
     gene            20433..24944
                     /locus_tag="PXE50_000712"
     CDS             20433..24944
                     /locus_tag="PXE50_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HDL5621645.1"
                     /translation="MINKNFPLSYLASFVAFAVSLSATASVFRDDIDLQYYRDFAENK
                     GKFTVGASNIEIKDKSGNTLDALFPNVPMPDFSAANRNLGIATLVAPQYLVSVAHNTQ
                     YNTVEFGAPGTNADAHHYTYKVVDRNDYGIVEGGQHQDYQVPRLNKLVTEVAPATVTD
                     LGNNASAYQDSSRFTHFARLGSGRQIVKNTEHKDNQISTSYQYLTGGVHLPIAVHNSD
                     YWLDFRGNALNNSPYGALTAFGTRGDSGSGVYGYDQKTKRWLLLATYTFGTPANNYYN
                     RAGIIRQDYHDKQFAEDIAGTLTNAQQNAVFEWSAQGKDSSIGNKGKNLTVSLADRSI
                     KDNSASPLGYGGTPQLQLPQDNTGKTLNIEGQDSTIVLKTDIDQGAGALNFNANATVR
                     PENDQSWVGAGIVVAKGKQVNWQVKNPQGDRLSKLGEGTLHINGKGENLGDISVGQGT
                     VILTQQAGENGKKSAFNQVGIVSGRSTVVLNSADQVDPNKIYFGFRGGRLDLNGNNIA
                     FNRIQNSDDGARIVNNHLQKAATLTINGPKPPEATDLKWGTWKENSADIYEYINPHAN
                     NRTDYFTLKGNPNQYMPTNGASNAHWTFLSSNKDAAVKQVLAQKGLEHRYNSFNGFIG
                     ETDNTQHNGRLNVVYDPKASTPPATASEVTWGKGLVAGADIYLFTNPKTKIREYFALK
                     GDPKQPVPRGGLSSEHWEFLAADRNQAINKVLARKNAPIEQEKLNSIYTFSGGLNLNG
                     DLTVKGGKVLLSGRPTPHAYDAINKQDVVYADDWQNRQFKADNMQLNQYAQLYVGRNV
                     SNLQANLSANDHAQLHLGFINEQTPSCYYSEYTGKTSCDTQAVVSNEIFATLPTTQIN
                     GDVSLAEQSQLHIGKANLIGTIQAAATTSIRLANQASWTNTGDSRTGNLVAENGSTIN
                     LNEKFVTGEIPTRFNTLIIDGNFQGNAKINYLTDIAAGKGDHLQVNGLAEGTFTLALR
                     NSGKEAEVVSPLSLLTLTHQAQADKAKVSLENGYVDLGAYRYVLANRSNGYRLYNPLK
                     DAKDRNQSIATAKAELDHAIAEADKQKQEISRLNAEAEKERQAEKNAKQAAANAQSQL
                     SQANSELTRLQQYADYYRRYYPTYYRQIQGQITVAKQKVTQASAALTTAENNAKASAA
                     QIANVEQAVETAQNIAKQVEAKLATLRITAGNSEAILNAEALKLCQENGANCEHLQAH
                     ADTDSSNIQQSDWVSQYANTALSELSAQANSALQIGQDLDRQLFAKHDKFHVWSSIEH
                     QKTEHQSDLYRPYEQQTNLTQLGIELPLANGINAGVMLSRNHANAEFDEGVNGKSNLL
                     MASLYGKWHSENGTFVSLDGSYGKAKNRIDLFGENRFNRHIMAIGANLGHNFDLAGVQ
                     VQPAVGTRYYRFSAQNYKLGEVEVRSPKAHFMAYQAGVKVSKAFDLSSWKVEPSLAAH
                     YVDASSKRLSVAVNDNTFSQRFGRYLKTEVGVGVTKGQWQLSSHLGLLKGNEIGKQHF
                     AGFKLGYSW"
     gene            complement(24999..26108)
                     /gene="mobA"
                     /locus_tag="PXE50_000713"
     CDS             complement(24999..26108)
                     /gene="mobA"
                     /locus_tag="PXE50_000713"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HDL5621646.1"
                     /translation="MEEKISAVILAGGLARRMNGAEKGLQLLDQKPLISHLLARLSPQ
                     IEDIWLNINRSVEQYQQLYPELPYYQDSLPDFQGPLSGMLSGFEQIESDYLLFVPCDT
                     PFIPTQLLHKLHTALRINQAQIAYAHDGDRPHPTVALVHRSVAENLRAYLASGERRLL
                     WFFQTQKSVAVDFSAYKAAFRNFNCLEDLTAFNPYPIKTLAITGYSGTGKTTLLEKLI
                     PKLTACGIRVGLIKHSHHNVDIDKKGKDSYRLREAGANPTMVVCDERWALMTETKQAA
                     ETKQAVEFSQLIAKFDPETVDLVLVEGFKHETMPKIQLHRKEIEKPLPALDQWTIATA
                     TDYPLERENRLDINDVEQLADFIRQWLEASKEPAN"
     gene            26200..26469
                     /locus_tag="PXE50_000714"
     CDS             26200..26469
                     /locus_tag="PXE50_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihD family protein"
                     /protein_id="HDL5621647.1"
                     /translation="MKCKRLEELLELLGEHWRKNPDLHLIDILQQLSVEVSEPDNFHA
                     LRDEVLIYQLKMRNADKFEPIPGIKKDYEDDFKTALLRARGILND"
     gene            26513..27151
                     /locus_tag="PXE50_000715"
     CDS             26513..27151
                     /locus_tag="PXE50_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HDL5621648.1"
                     /translation="MKKFALKTVLVALSALFAFNATAVAADPTAGKEYIEVRKAPSAQ
                     KEVVEFFSFYCPHCYDFELNYKIPSQIKAKLPADSKLVQYHVNFLGRQSENLTRAWAL
                     AMALGAEDKVKTALFEAAQKDAFKSMDDIRAVFIANSISAEQFDSGINSFAVNGLVNK
                     QVQLAEDFQIRGVPAFFVNGQYQLNLEGFSDSSSTNDFIQRYIDAVVFLSKK"
     gene            27171..27623
                     /locus_tag="PXE50_000716"
     CDS             27171..27623
                     /locus_tag="PXE50_000716"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MsnO8 family LLM class oxidoreductase"
                     /protein_id="HDL5621649.1"
                     /translation="MVLQVLNSKAIQPFLYANSENKMTNLSILNLVPIREGQTAKQAV
                     DSMVKLAKHAENIGIERYWIAEHHNMKNLASSATQLLIQHALSHTEKLRVGSGGVMLP
                     NHSPYIVAEQYGTLETLYPNRVELGLGRAPGTDMRTASALRPEFAFPR"
     gene            27607..28269
                     /locus_tag="PXE50_000717"
     CDS             27607..28269
                     /locus_tag="PXE50_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HDL5621650.1"
                     /translation="MPFPDEISELKGYFDGTNPVSAYPAQGLNVPFYILGSSPESAYL
                     AAERGLPYAFASHFAPRFMDDAIRIYRSHFKPSDVLDKPYVILGVNAIVAETDEEATQ
                     LATTQTQFFLNVVTNAQQNLQPPLESDDKVWENFVKAEIVPHFGPVAFEQNALYRQEK
                     TVVRQMTECSLIGSPQSVEQQLKALKARVEIDEIMAVNYIFDEQKQHQSYTWLKQITD
                     KV"
     gene            28271..28564
                     /locus_tag="PXE50_000718"
     CDS             28271..28564
                     /locus_tag="PXE50_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcZ/YiiS family protein"
                     /protein_id="HDL5621651.1"
                     /translation="MSKTMQQKAAEAHNMCRLKGDSMLDNADRQIAFEAVYESEELAQ
                     QAVEFFAQKAKSVETEPCEIQSEITQIAEGFLMKMWITFSCQAEVILFQMAVR"
     gene            complement(28633..29967)
                     /gene="srmB"
                     /locus_tag="PXE50_000719"
     CDS             complement(28633..29967)
                     /gene="srmB"
                     /locus_tag="PXE50_000719"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase SrmB"
                     /protein_id="HDL5621652.1"
                     /translation="MTQLMTFEELDLSPQLLKALAHKGYNRPTAIQQATIPAALEGRD
                     LLGSAPTGTGKTAAFLLPAIQHLLDYPRRKPGAPRILILTPTRELAMQVAEQAQALAK
                     FTQLSIATITGGVAYQNHGEVFNKNQDIVVATPGRLMQYIKEENFDCRAVEVLIFDEA
                     DRMLQMGFGQDAEKIAAETRWRKHTWLFSATLEGELLEDFAERLLNDPIKVDAEPSRR
                     ERKKIQQWYYHADNVEHKTKLLARIISEFSVERAIVFVRRREDVRELSETLRKRGIRS
                     TYLEGEMAQTQRNQAINRLKEGVVNVLVATDVAARGIDIDDIDFVLNYDLPYSADTYL
                     HRIGRTARAGKKGSAISLVEAHDYKLLGKIKRYTEEVLKPRIIEGLEPRTKAPKDGEL
                     NVTSKKEKARIKKKKEAKKEAAKPKVKVRHKDTKNIGKRRKPSSESAAVKQA"
     gene            30127..30390
                     /locus_tag="PXE50_000720"
     CDS             30127..30390
                     /locus_tag="PXE50_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GrxA family glutaredoxin"
                     /protein_id="HDL5621653.1"
                     /translation="MFVEIYGRLSCPYCVRAKTLAEKMKQELSDFDFKFIDMIAENIS
                     KQDLEPRVGKPVATVPQIFVDNNHVGGCTDFQAFVEEKFGITV"
     gene            complement(30438..30536)
                     /locus_tag="PXE50_000721"
     CDS             complement(30438..30536)
                     /locus_tag="PXE50_000721"
                     /inference="COORDINATES: protein motif:HMM:NF028261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine/alanine import family NSS transporter
                     small subunit"
                     /protein_id="HDL5621654.1"
                     /translation="MSSAAIITMVVAMTIIWGGLLFAIKRLPKEEQ"
     gene            complement(30536..32044)
                     /locus_tag="PXE50_000722"
     CDS             complement(30536..32044)
                     /locus_tag="PXE50_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDL5621655.1"
                     /translation="MSNQSSNAPQRETFSGRGAFIMAAIGSAVGLGNIWRFPYTTYEN
                     GGGAFILPYIIALLTAGLPLLFLDYSIGHKYRGGAPLAFRRFSSKFETFGWWQVLINV
                     IIGIYYAVVLGWAASYTYFSFSGAWGDKPVDFFIGEFLKMGDITQGVSFEFVGMVTGP
                     LIAVWLIAIAVLAMGIKKGISAASNLLMPQLIVMFLVLVGYSLTLPGAAKGLDALFTP
                     NWEKLADPSVWIAAYGQIFFSLSICFGIMITYASYLKKETDLTGSGLVVGFANSGFEL
                     LAGIGVFAALGFMATAAGQEVNEVAKGGIGLAFFAFPTIINQAPMGALVGVLFFGSLT
                     FAALTSFISVIEVIISAVQDKLNSGRVKATLLVGIPMMVVSVLLFGTTTGLPMLDVMD
                     KFVNQFGIVAVAFVSLIAIVTSEKLSTLEKHLNEVSSFKVGFIWRLCIVITSGVLAFM
                     LFSEIAKVYREGYEGYPSWFVNTFGWGMAIGLVVVAYLLSKMAWKNEPKGDE"
BASE COUNT         9437 a         7128 c         6267 g         9310 t
ORIGIN      
        1 gtacattttc gagaaaattt tcgctaagcc caccatcttg attaggcttt ctagatatat
       61 gccaaaatcc agataaacga taatacccta cctgagataa ttttttctct gcatagcttt
      121 tatcatttat gagcattcct ctagatatga gtagttctac taattcgtga tactctttat
      181 gtggttttgt aggcataaaa ttgaaggcat tttaagaaag gcaaggacgt agcttgacac
      241 tctaagtcga ttacatttag taaacctcag ggacaggggc tacgccacga ttgcaaggga
      301 ttatacattt tagctgatta aagtcaaaag gtttcatcaa ttaataatag caatactgta
      361 cttttaagga ctataattgc aaaaaactga taaaatttta ccgcttgtta ctgcttacgg
      421 gccgctttta caacaccttt tacacttaat agcttacgga gaatcagctc agaatgctct
      481 ttattttcca cagaaatttg tactctcact tgatagatat ttccttctct tgcctcgcta
      541 ttaatgctgc caatgttgct atttaatttg gcaagcgttg atgtgatccc cgcgagtacc
      601 cctggttcat tgataatatc cagtacgatt tccgtttcaa attgaatcgc tttttctttg
      661 gcaatttccc attccacagg taaataatta ctcggctctg ttgcgtaatc tttcacatta
      721 ccacaacaag cattgtggat tgccaatcct ttacctgaac tgacgtgagc aataatttca
      781 tcacccggta taggtaagca acagtttgca aaactgataa ggcggttctc aatcccttca
      841 attttaagcg gttgattatt ttctggatta ccatcagtat caattaatag tggctcccct
      901 aataagcgtt gagcgataac attactcatt tggttaccta gaccaatttc agccagtagc
      961 tcatcaaagc ttgataaacg tagctcgtct aatacggatt gaatagtttc tgaacacaat
     1021 tcatcaagtg agcgtaaatt cattgcccga actagctgtc tacgcccaag tgcaatcgcc
     1081 tcatcgtgct gctgattttt aagcgattga cgaattttag ccctcgcctt accacttact
     1141 acaaaattta accacgatgc atttgggcgc ttaccttgct cggtaataat ttccaccgtc
     1201 tgtcctgttc gtagcggttc tgaaagtgga tacggattgc gatcaaccat cgcacctaca
     1261 caacgatccc caatgcctga atgcaccgca taggcaaagt caatagcggt agcattcgcc
     1321 ggcaattcaa caatacgccc tttcggggta aagacgaaaa tatcgtcaga gaacagatcc
     1381 gatttaacgc tatcaataaa ttctgctgta ttgccggcac tgttttgcaa ttcaacaata
     1441 ctttgtagcc attgctgggc tttgagttga acggtcgtgt tatggtgcga ctcgccctct
     1501 ttgtaacgcc agtgagctgt tacccccata tccgccattt tgtccatatc ttcggtgcga
     1561 atctgtacct ccaccggtac accgtgcggg ccaatcatcg aagtgtgtaa agattgatag
     1621 ccgttcggtt ttggcacggc aatataatct ttcacccgtt tcggacgagg cttatacagt
     1681 gcgtgcatct gccctaatac acggtaacaa ttatctacat tatcaaccac tactcggaaa
     1741 gcataaatat ctaaaatcga atgaaaatgt tgatctttct ggcgcatttt ttggtaaatg
     1801 gaatagagat gtttttcacg cccatacaca cgggcttcaa tttgcacctc ttctaaccga
     1861 ccacgaatat catcggcaat gcgttgaatt agctctttac gatgtcctct ggcactggca
     1921 atagccattt tcagtacccg ataacgttgc gggtgcattg cctcgaagcc taaatcttcc
     1981 aactcgtttt taatatgctc tattcccaag cgatgtgcca acgggctata aatctctaag
     2041 gtttctttcg ctatacggcg gcgtttatcc ggacgcaaag caccaagcgt acgcatatta
     2101 tgggttcggt cggcaagttt aattaacaca acccgaatgt ctttggtcat tgccaaaatc
     2161 attttacgga agtttgccac ttctgcctct tggcgggtgc ggaattttaa tttatccagc
     2221 ttagaaacgc cttgtacaat atctgctacg ctctgtccaa attccgccgc cagttcttct
     2281 tcggtgtaag gtgtatcttc aatcacatcg tgcaacaaag ccgcaatcac cgcttcttga
     2341 tcgagcttca tttccgcaat aatcgacgcc actgctaccg ggtgagtaat atagggctca
     2401 ccgctagagc gtgtttgtcc ctcgtgagca tcacgggcta tcacataagc acgttttaca
     2461 cgctcaatct gctcgggtgg caaatagcct tgaataattc gatctaaagg ttcaaaaaga
     2521 tacacgttat acctcaacaa cagaaataaa aatggacaac gaatttgcaa attttgagga
     2581 aaatcctacc gcttgcagac tcaattgtcc attctctatt tacgaaaaat aaaattacgc
     2641 ttcgttgctc atttcagtta aaaatgaaat cgcctcttgc tccgccgctt cttgcttaat
     2701 agagtcgtga ttttccagct gatccataat gtcagttgta attaaacctt cttcaatttc
     2761 acgtaatgca atcacggtcg gcttatcgtt ttcttcaggc acaagtggct cacgggtgtg
     2821 aagttgtaat tgtcttgcac gacgtgcagc aattaagatt aaatcaaaac ggttgccaat
     2881 tttctccgct gcttcttgta cggttacacg agccataaat ttactccaaa gatttattcg
     2941 gttttattca taaaaagatt gcgaattata cagaaattcc gccaattccg caatgaaagc
     3001 gggctaaatt cacaaaattt atttggtatt cagtaaaatc gccaataatt cagcctcaac
     3061 ctctttgccg aattttccca ttctaaaatc ggcttttagt tgctcgaatt gctcagggtt
     3121 cgctgccatt ttatctttta aaaattgcgg aaattcagat aacactaatt ctgttttgcc
     3181 attacgaata tcaaaaatag ttggaatttt ttgcgcagaa atgaccgctt gttgctgttc
     3241 atcgctgtca aaatgtttgc gttcctgatt atctttgcga gccacatatt tcaccttaat
     3301 gttaggattg agctttgcca ttcgctggaa ataagccaca atttccacac aatcggggca
     3361 atatggctct gccattacca gccagtcccc ttgcacgcca acagcttgca gtttttcttc
     3421 cgtatctgtg gaaagcttga cctccacata cacttctaat tgattttcac gatcttcatc
     3481 gctgttaaat tctaaatatt cgtaaaaatg tgccataatt ttgtcttttc ctatctcatc
     3541 ttaaatggat ttacgccata aaatttcaca atcaacttta acgtcatcta ttttctgttg
     3601 cgctaacttt tgctgaatta attcaaaggt acgttcggca atttgttggt ggtcttgctt
     3661 aattgaatga atatgaaaag gtagtgcatt cagtaaatgg tgatcatcaa aggttgctaa
     3721 atgcagttct tgagtcaata atttatccat ttgttggtgt tcagtcagat agcgcattac
     3781 tccctcaagt agggtaaaag aggctgtgaa taccgcttct gggagcctgc caagtttttc
     3841 aactatctga gcgaacattt gatagcccga ttccggctga tagtcttgat gcagaaccca
     3901 attttcatca agtgccaaat gtgactgctc caaaccttca cggaagcctt ttaaacgatt
     3961 ttgacttggc gagagtgaaa gttgtccacc taagtaaaaa aactctttta agtgataagc
     4021 ccgtacaata ttttccacca acatactgat actttgtgta tcattactgg tgatagaagg
     4081 gatattcaac ccagaaatat agcggtctag ctgtaacatt ggggtatatt gtgccgcatt
     4141 ttgataataa gtcggctcat tatgtgtcgg agcagtaatc agtaaatcta cctgtctgtc
     4201 taataaacgc tctatcgctt tcttctcacc ttcaaaggta tcatccgagc aagcgatcac
     4261 tagctgtaac ccgttttcac ggcataattt ctctaaggtt cttgaggtca gagcaaagcc
     4321 ataattcgtt aaatcgggaa tgactaaacc gatcacattc gtgcgttgag cctgtaatga
     4381 ttttgcatat acattagcac gataaccgtg ttttttagcg atctctttca ctttttggca
     4441 ggtttcggat ttgattctaa aatcattgcc ccgcccattt aaaatcatac tgactgttgt
     4501 tttagatacg ccgctgagtt ccgcaatatc actgagcgtt aggcgttttt tagtcacact
     4561 tatctccttt tagcataaaa atgggcatta ctgcccattg ctttattcta cgctaattgg
     4621 caatactttt gctactttca cttgaatcgg acgagagctt tttacgacat tttcacgctt
     4681 agcgataaaa aagcgtgaag tcagcacttt ttccccgccg tttacgaaaa tttccaccac
     4741 agaacggtca aagaaaatct cgattgtctc taattgttca attttgcaat gacgaaccga
     4801 gccaaatttt tccatcaatt ctgtttgttc ggtttggcta cgatctaagc tcaacacccc
     4861 attttcaaaa cgtaagctga gcttttgccc ctgttcattg ctgaaaaaat ccaacacaag
     4921 cggttgattt tccacagaaa tttgcaagta ggcagtatcc aaattctcga ttgcaaaatt
     4981 ttctgacatt tcgaccgctt gtaattcgcc tacattcacg attgggtttt gtatcacttt
     5041 gccgttttgc agggaaagtt tacgaggcaa tgtcagcatt gaatgccact gatatttatc
     5101 agttgggtaa gtgagatcag gcaagccgac ccagccaaac aaaatgcgat cggaattttc
     5161 caccgtttgc ggtgcgtaaa agtcaaagcc gtagtccagc tcttcaatat gctctgcccg
     5221 taatctgttg ccgtttagct cgccaagtgc gtaagtggcg tggtagttat tttggaattg
     5281 atggctttca cgcagtttgc cttgtggcga ccacacaaac agatctttac caccaagtga
     5341 gaacagatcc ggacactccc acataaacac attgctgtta tcaaaattgt ggacttccag
     5401 ttctgcgatt aaacggggtg tggcatttaa atcgtccatt tcataaatta acgccgtgcc
     5461 ggtcaagttt tcacgctgag cccccaacac aaaacgaatt ttgccctctg cggtaaggta
     5521 aggtttcggg tcacgcacgt gttcggtgta gcctgccggt gcttggtcga taatgcaacg
     5581 cttttccaat aatttgcccg atttatcaaa aatcgcgata ttttggtgag gaatgcgggc
     5641 attatctgat gggcggcgtg tattgccggt gtaaaaagcg acaatcttat cttgccataa
     5701 aatcgcccca cctgaataac agccgtggga ttcaaacagc tcatcgggaa tcagcaaatc
     5761 ccctttactg aacgtttgaa aatcggtagt gatgaaatgc tgccaatgtt tcattccatg
     5821 taatgcccca taaggaaacc attgggcgaa aatatggtat ttttcaccat cgaaaatcaa
     5881 gccgtttggg tcattaaata agcctgtttc gggagcgaga tgataggttg ggtaaaaatc
     5941 gggatcagat aaaacggttt ggcgaagagc gtttaattcg ccctcgcttt gtgcgtgcag
     6001 gcttttgtat ttgccgttgt tgaaaatgtg catagagtgt tcctgtcatt tcagaaatta
     6061 cgatggtgca agcgtccacg cttgtaccct tttgtaaaaa atgaggcaca agcgtggaca
     6121 cttgcgccat cattacatta ttccgccaaa aatgcgtcta actccgcttt attcggtaat
     6181 gccgacatcg ccccttttgc tgtggtggct aacgcaccgg aagcatttgc tttgcggatc
     6241 acttcaacta acacagtttc atcgtgccaa ttcggcgttt gagcaagacc ggctaataat
     6301 ccgctgacaa aggcatctcc ggcaccggtg gtatccacag gtttcaaggc tttgccggca
     6361 acgacttggc tttttccgtt gaaatggtag attgcaccgt ctttgccaag ggtgataata
     6421 atcaatttct ccggatactg agcggtaata gcttgtgtgg cttgttccaa agtttctgtc
     6481 tcggttaata aggtcagctc ttcttcggaa aatttgagaa tatccgccat cgccaccaca
     6541 gaatttacca ctgttttcat ttcatcaagg ctcttccaga gcgattcacg caagtttgga
     6601 tcaaacgaaa catagccacc cgcctttttc actcggcgaa tcccttcaat ggtagtggaa
     6661 cgggatgggt cgttaatcaa ggcaatagaa cagcagtgta agaaatcacc ttggttaaat
     6721 tcaggtaaat cgccgatttc taaaaattgg tcggcactcg gatttaccat aaaagtaaaa
     6781 ctacgctcac cgttatctaa gccaacaatc acggtggaag tgcggtgctg agcgtctaaa
     6841 atcatctgtt tggtgcaaac attttctgcc tgtaacactt ctcgcataaa tttacccaga
     6901 gggtcgttac ccacacgccc gataaatcct gcctcaaccc ctaaacgaga aacgcctact
     6961 gcaacattcg ccggagcacc accggcacat tttaaatagt gatgttcgcc gtcgggaatt
     7021 aaatccacca ccgcatcgcc tgttacccaa atcttactca tctcatacac ctttaattag
     7081 tcacaaaaca ccaagctaaa acgatttagc atttattcga ttatatacta aaagaccgct
     7141 tgtacatacc tacaagcggt cattttttct ttaattttta cagattaacc acgtatttac
     7201 ctacacctaa atcatcttct ttacgagtgc gggcaatcac gctttctgcc gattccacca
     7261 cacgtaatcc catttggtct tcggtacgaa tcacttcgcc acggagtgag ttggtataaa
     7321 catcggtgat tttcacatcg acaaatttgc caatcatatc cggtgtgcca acaaagttta
     7381 ctacacggtt agtttcggtt ctgccggtta attccatcaa gtctttctta gacgggcctt
     7441 caaccaaaat gcgttgttct gtaccgagca ttgcacggct aaattgcatt gcttggtggt
     7501 tgatgcgttg ttgtaaacgg gataatcgct cttttttctc atcatcggag acattatcag
     7561 gcagatctgc cgctggtgta cccggtcgag ccgagtagat aaagctaaag ctcatatcaa
     7621 agttcacttg ctcgatcact ttcattgttt gctcgaaatc ctctgcggtt tcgcccggga
     7681 agcctacaat aaagtccgaa ctaatttgaa tctcaggtcg aacagcacgc aatttacgga
     7741 taatcgcttt gtattccaac gctgtgtggt tacgcttcat cattgttaat acacggtctg
     7801 aaccactttg aatcggtaaa tgtaagaaac tgaccaattc aggtgtatca cgataaactt
     7861 cgataatatc atcggtaaat tcaatcgggt ggctggtggt gtaacgtaag cggtcaatac
     7921 cgtcaatcgc tgccactaag cgtaataatt cggcaaaggt acaaatgccg ccatcaaaag
     7981 tttcaccacg gtaagcattt acgttttgac cgagtaaatt aacctcacgc acaccttgtg
     8041 ccgcaagttg ggcgatttca aataatacgt catccaccgg gcgggaaacc tcttcgccac
     8101 gagtgtaagg cacaacgcag aacgaacaat atttattgca gccttccata attgaaacga
     8161 atgctgtagg gccttcggct tttggctccg gcaagcggtc aaatttttca atttccggga
     8221 aagaaatatc gacaatcgag cttttaccgc cacggatttg gttgatcatt tcaggcaaac
     8281 ggtgcaaagt ttgtggcccg aaaacaatat ctacataagg ggcacgatca cggatatgct
     8341 ccccttcttg tgaagccaca caaccgccaa caccgataat caggttcggt ttatcttttt
     8401 tccagttttt ccaacgcccg agttgcgaga atactttttc ttgtgctttt tcacggatag
     8461 aacaagtgtt tagcagcaac acgtctgcat cttcagggtt ttcagtcagt tcaaaaccgt
     8521 gagtagagtt taggagatcc gccatttttg atgagtcgta ctcattcatt tggcagcccc
     8581 aagtggtaat atgtaattta gccataacgt ttaaaattaa taaataattc aataacttag
     8641 aaaagaaaag cgtaaagcaa tttattattt ttgacttaaa ataaaccctt tacgcaaaat
     8701 ttgtggcgtt attttacctt gttgcctatt ttttatctat aaataatcgc catttatccg
     8761 attttaccta aaacaaaaaa gccacgatct tccatcgtgg cttccagcta agtaggaggt
     8821 attatttggt taaggttaaa accacgcttt caccggcaac aacttggcca tttaatttag
     8881 ataagttgct gatttcatcc atatttgaaa tcacgattgg tgttaatact gatttggctt
     8941 tgccttcaag tagagctaaa tcaaatttaa tgatcggctc gcccactttt acggtttgac
     9001 cttcctgtgc aaggcgagta aagccttcgc cttttaattc aacagtatca ataccgaagt
     9061 gaacaaataa ttccacgcct tcttcagatt caatcgaaaa agcgtggttg gtttcaaaaa
     9121 ttttgccgat agtcccattt actggagcaa cgatagtgtc tccactcggg cgaattgcca
     9181 caccgtcacc tacaattttt tcagagaaaa caacatcagg cacatcttca atatttacga
     9241 tttcacctgt taatggcgca tagattttga tttcttgact ctctttttgt tttgagccga
     9301 ataatttatc aaataaaccc atcttaaaat ctcccttaga tattagatac aaaattctcg
     9361 tacattttat acgagaattt tgtatttgta tgctaaataa ttaaaattag tttaatttct
     9421 gataaaactc atctactaag cgttcaatat ctgcagcagt tggctgagca agcgcctcat
     9481 cagctaatgc tttagcatcg gcaaaattaa ttgagcgaat gagtttttta acgtgtggca
     9541 cagagatacc gctcatacta aattcatcta atcccatacc gagcaacaac gcagttgcac
     9601 gcacgtcacc ggctaattca ccacacatac ctgtccattt gccttcagcg tgtgaagcat
     9661 caataacttg cttgattaag tttaagactg atgggcttaa tgggttatat aaatgagcaa
     9721 taatttcatt accacgatct accgcaagtg tatattgggt taagtcatta gtaccaatac
     9781 taaagaagtc ggcttctttt gcaagatgac gtgcatttac cgctgctgat ggggtttcca
     9841 ccataatacc tagttttaag ttctcatcaa aagcgtgacc ttctgcacgt aattgatctt
     9901 tcaattccgc aacgatggat tttaataaac ggatttcttc caccgaaata atcatcggga
     9961 acattaccgc taaattaccg aacgcagaag cacgtaatac cgcacgtaac tgagtatcta
    10021 aaatttcacg gcgggtgaaa ccgatacgca ccgcgcgcca acctaagaat gggttcattt
    10081 ctttcggtaa atcaaggtat ggtaactctt tatcacctcc gatatccatc gtacgcagaa
    10141 tgaccatttg accattcatt gcttcaacaa tctctttgta ggcttgaaat tgctcttctt
    10201 ctcccggtaa ttgagtacga tccataaaca aaaactcagt acggtataaa ccaaccgctt
    10261 caccaccgtt gcgtaataca ccttccacat cacggatagt accgatattc cctgccacat
    10321 caactttatg gccatctaat gtttgagcag gcaactcttt taatttggct aattcttctt
    10381 tttccgcatt taatttctct tgtaatgctt tgaaattagc gattttttct tccgatggat
    10441 ttaaatgtac ttcattgttc actgcatcta aaatcagaaa atcaccagtt ttaactaggg
    10501 aagtaacatt gttagtacca acaatggcag gaagctctag ggaacgagcc ataatagaag
    10561 tgtgagaagt acgaccaccg acatcggtaa taaagcctaa tactttatct aaatttaatt
    10621 gagctgtttc ggaaggggtt aagtcataag cgactaaaat aacttcatct tgaatatcac
    10681 caagatctac gatattcata tttaaaatat tgcgtaccaa gcggttacca atatcacgaa
    10741 tatcacctgc acgttctttt aaatattcat cgtcaatttc cgcaagcatt gaagcctgca
    10801 tctcaatcac tttacttgct gcaacatccg cagtcacaag attatcagta aggtaactca
    10861 aaatttcttc ttcaagctct tcatcttcta agatcatcaa gtggccttcg aaaatcgcct
    10921 ctttttcctc acctaatgta cggcgagctt tttctttaat cgcggttaat tgagcagctg
    10981 ctttttcgcg gcctgtaaag aattttgctt tttctgcctc aacttcgctt tcagtaattt
    11041 tgcgagtatt tagtacaatc ggctcttctt ttaaaaccaa tgcttttcca aatactgcac
    11101 caggggaagc tgcgatacct gtaatcataa ttgtgtcctt aatttaagat gatgtaaaaa
    11161 tcatctggat gttacatagc aaaacacttt attgtagctt attaagctac aataaagtga
    11221 cataaatctt aaatccgaga atagaaaaat tattctaaag taggaatcaa atcaactaag
    11281 aaatcaactg ctttttgctc atcttcgccg tccgcagaaa ttgtaattgt tgtgccttga
    11341 gtcaaaccta atgtttgtaa tttgaataag ctttttgcac ttgcactttt accacctgaa
    11401 gtcacagtga tatcagaagc aaaaccttta gctgctttta caaattcagc cgctgggcga
    11461 gtgtgtaaac catttggagc ggtaataaca acatcttttg agtacataaa atcttcctct
    11521 taaatttgaa agttaaaaaa atttgtttta atccatttat tttgcgcacg caactttact
    11581 acaaattcaa attaaaaaca cgctaaaaag cgcaaaaact cgtcgtatca ccctgctaaa
    11641 tagggtgttt tttaagctaa cttaaaaatc atttgtcgaa tatcaagatt ctagcacaca
    11701 cttaagcgga aatgttacaa taatttcgct accacttctt tcacttatat tctaaatttg
    11761 gagcaatatg cttagcacat taaccaaaac aaccgcatgg tttatctact ttagtattat
    11821 tgctctctat gtttttagtc tatgggcgtt aatggactat caccaaaatg ataccttatt
    11881 tgttttttcc gatataacgg ccacggtcgc ttatagccta cttcaagcca gcctctctgc
    11941 ggtaatttca ctatttttag gcagcctact ggcaagatct ttcttttatt tggactttaa
    12001 aggaaaaaat ttactctata aaaccatttc gtttatctgg gcattaccct cactagtaat
    12061 tatttttgcg gtaattggcg tatttggtaa ctcaggctgg ctagccaaac ttttccaaca
    12121 actcggttgg aattggcaat ttaatttata cggcttgcac ggcatcattt tggctcactg
    12181 cctgtttaac attccgtttg tgatgaaata ttataccgga gggcttcaat tgactccaag
    12241 cagtcgcttt cagcttgcgg ctcaattaaa cctaacaggt tggaattata tccaaattgt
    12301 ggaactaccg ataatcaaaa ctttgctgcc ttatatgttt atgactgttt ttctggtctg
    12361 ctttaccagt tttccaatcg tattaatgtt aggcggtagc ccaaaataca gcacgcttga
    12421 agttgccatt tatcaagcgg tcacttttga atttgatttt gcaaaagccc tcatcttaat
    12481 tggggtacaa tttgtagtgg gcattggctt acaattagta atgaattata tctcgacttc
    12541 tgcactcaaa aagctaaaac agcaacctaa ccgagtagaa atttggaaac caaagcctac
    12601 cggactggct aaactcggct tacaagcggt tatttttttg caaagttttg caataattct
    12661 accgcttgtc agcgtcattt gggcaggact aagcgtgtca aaactcagtg agcgtttgct
    12721 caaccctact ttatggcaag ctactcagta ttctttatac ttaagtttaa ttgcttctat
    12781 attcgtaatc acaatcagct atttgattgc acttgaagct cgccaattac tctatacaaa
    12841 agccaagctc agatatagca ttctcaccgc aatcacccta ttccccttac ttctgccgat
    12901 ctttttatta tcggttggtt tgtttatttt attaatgaat agtgaactct caagcgaggc
    12961 attactgcta ctggtcggga tatgcaacgg cttaacatta ctgccattta tttacccaat
    13021 gcttttctcc gcaatgtgga atagcctcac ctcgcacgac aaattagcac aaggacttgg
    13081 gctaaagggg cttcgccgtt ggtggattgt ggaaaaaaat caactaattc gaccgcttgt
    13141 taccgtattt gcgttagcaa tgtcatcgag cttaggcagt ttcaccgtca ttgctttttt
    13201 cggcaacgct gatttcagct cactccctta tttactctac caacaacttg gtagctatag
    13261 aaccgaagat gctgccgtta ccgcactcat tctgatgtta tttgcgttac taccattctt
    13321 attcagcaag gataaactat gatcgaactg gatctccatt tcacttacga acaaatgaat
    13381 atgcactttc agctttctgt caaaaaaggc gaacgtattg cagtggttgg cgaaagtggc
    13441 gcaggcaaaa gcacattact taatctaatt gccggttttg aaaaggcaga aagtcagcaa
    13501 agccagctgt ggctaaatca gaaaaatcat cttgataccg aagttgcaca acgtcctgtt
    13561 tcaatgctat tccaagataa caatattttc ccgcacttaa cggtagaaca aaacatcggc
    13621 ttagctttag taccaagttt gtcgctcaat ccgaaacaaa aagcacaggt taaacaaatt
    13681 gccacacaaa tggggattga aaccttcctt cagcgtcaag ccgatcagct atcgggcgga
    13741 caaaaacagc gagtggcatt agctcgtact ttgttgcggg ataagccgat tttattattg
    13801 gacgaaccct tctccgccct cgacccgcaa cgccgagccg aattacagca aatcgtgttt
    13861 gacatttgcc aaagcagaaa tctaaccctg ttaatggtaa ctcaccaact atccgaaagc
    13921 ctatttctat ttaatcgggt gataacggta gcagatgggg agattgtttc tgatctctcc
    13981 cctctttagc aaagcagatc tgctaggttc taaatgtagg gacgccacgc tggcgtacgc
    14041 aacgatgtca attccaacaa tctaacggtg aatgatgttc cgcacggata ctagcgttat
    14101 tcattttttt cagaactcgc cccctacttt agcaaagagg ggaactgtaa ctaatattac
    14161 ctccctattc cgctattctc ttccccaaaa tgtgatctac ttcacaaatt tggaaatatt
    14221 ttaaatcttc tcttttttag ctaaaccgat ttagttaaaa tgcaaccgat tattttttat
    14281 gaaaggtaaa ttcaaatgaa ctatccaaaa attgcagaac aaacgattgc aaaattaggt
    14341 ggcaaagaaa acattaccac acttgcccac tgtgcaaccc gtttacgctt aaccattgct
    14401 gatgaatcca aaattgataa agaggcgatt gaaaatattg aaggcgtgaa aggtcaattc
    14461 tctactcccg gtcaatacca aattattttt ggatcaggca cggtaaatga agtgtatgcc
    14521 caaatgcaaa aacaaatggg tatggcagat atgtccacct ctgaagtagc ggctgccggt
    14581 gcagcaaatc agccattact acaacgtttg gtaaaaggct tagccgatat tttcgtgccg
    14641 atcattccgg ctattgtggc tggcggtttg ttaatgggta ttcactcaat gctaacggca
    14701 gtcggtttct tctgggaagg tgaatctgtt gttagccgtt atccgaatat ttccgattta
    14761 gttgatttca tcaacactat tgctaacgca ccatttgtat tcttacctgt attactcggt
    14821 ttctcagcta cacgcaaatt tggcggtaat ccattcttag gtgcggcact tggtatgtta
    14881 ttggttcacc cggcacttgc agacggttgg aactatgcca aaaccttaat ggaaggtaac
    14941 atcaaatact ggaatatttt cggcttagaa attgaaaaag tgggttatca aggcacggtt
    15001 attccaacta tcgtttcggc ttgggtgtta gcaacccttg agaaaacttt ccgtaaattt
    15061 gtgccaagct atttagataa cttggtgacg ccaatgatgt cattatttat cgccggtatt
    15121 ttagctttca ctgtaatcgg accattgggt cgtgaagcag gttcagcgat ttcagcaggc
    15181 ttaacgtggt tatatgacag cttaggcttt atcggtggag caattttcgg tacattctac
    15241 gctccaatcg tgattaccgg tatgcaccaa acctttattg cggttgaaac ccaattatta
    15301 gctgaagtag cacaaaccgg cggtacattt atcttcccga ttgcagcaat gtctaacatt
    15361 gcacaaggtg cagcctgttt aggtgtagct tttgcaatga aagatgccaa agtgcgtggt
    15421 ttagccgtgc cgtcaggtat ttcagccctg ttaggtatca accggcaatg ttcggagtaa
    15481 atttacgcta ccgccaagcc tttattgcgg cgatgatcgg ttcaggttta gccagtgcat
    15541 ttatcgcttt ctttaatgtg aaagcaattg ccttaggtgc agccggtttc ttaggtattc
    15601 cgtcgattaa acctgacagc cttgcaatgt attctgtcgg tatggtaatt tcatttgtag
    15661 ttgcatttac catttcagcc atttgggtga aaaaagcaca agcgaaataa tcaaaaatag
    15721 atcacaaaaa agggattaag tgttagctta atcccttttg tttttaaacg ccttagctta
    15781 acaatgagtt tcgcaagcgg tcatttttcg ctaaaaattt gcaaattagc tgttgtgcat
    15841 aattcgagaa atacgccctt cggcaatctc ttcatcacga attgtcagca cttcacagcc
    15901 gtctttggta actacaattt gatgctcata ttgtgcggag tggctgcggt ctttggtttt
    15961 cactgtccaa ccgtcaccca ttaagcggac ttcttttttg ccggcattca ccattggctc
    16021 aatcgtaaac accattcctt cttttaacac tacaccgcca tcatcggtag cataatgcac
    16081 tacttgtggg tcgcaatgga attcagtacc aataccgtgt ccgcaatatt ctcgtactac
    16141 cgaaaagcct tctttttcca catatttttg aatcgctgta ccaatttctt ttaaacgcac
    16201 ccccgctttc acggtgcgaa tcccgacata aagggactct agcgtaaccg ccattaagcg
    16261 tttatcccgc acacttggct caccgactac atacatcatc gagttatcgc catagtagcc
    16321 atctttgata accgtcacat cgatgtttaa aatatcgcct tttttcagct ttttgtcatc
    16381 acttggaata ccgtgacaaa cgacctcatt taacgaaatg cacaccgatt ttgggaagcc
    16441 gtgatagccc aaactggctg aagttgcccc atttgccaaa atgtattcgt gacaaatttt
    16501 atctaattca ccagttgtta cgccctcttt cacataaggg gcgatcatta ctaaaacatc
    16561 tgaagccagt ttacaggcta ctcgtagttt ttgaatttct tcttcgtttc ttaatggaat
    16621 attattcatt acattgctct ctgctatatc tgccataaaa agtaagggga ttataccttt
    16681 tttcagcaca atccccaaac ctcagtttag atttctactt taaatcaagt ttcttcataa
    16741 tgaaatttaa tatcacacca taaagcggta gaaatagcag taggctcaca aagagtttaa
    16801 acgcataatc gaccgaacca atagtaaacc aatgctctgc catatattca tcgctacttt
    16861 tataaaaggc gatagcaaag aatacaaaag tatcgattaa agtaccaaaa atggttgaac
    16921 aggttggagc aagccaccaa cgcttacctt gtcttaaact attaaatact agaacgtcta
    16981 ataattgccc aactaaataa gctgcaaagc tagccagtgc aatacggaaa acaaaaaagt
    17041 tgaactcagt taatgcacta aagccttgaa attgggtttc aaagaataaa acggaaatca
    17101 catagcttat gacaagtgcc ggaaacatca caacaaaaat aatttttcta gcaagatctg
    17161 caccaaatac acgcacggtt aaatcggtcg ctaagaaaat aaatgggaat gttaacgttc
    17221 cccaagttgt cggaaagcta aattctgtta gtggtacttg aacttcaaag ctaatttgca
    17281 ctaaatagtt gctaattgcg atgataaaaa tatggaaaag tgaaagtaaa attagagaac
    17341 gacgtttgtt ctcatccgaa aaataagtag taaagttcat attgtatcct ttttcgttaa
    17401 atgaaaactt gaggtaaggg aactcaaggg ggcattattc tatacatttt cccataaaaa
    17461 tcaagctcat attatttcaa aaaatgaaac aattaatcta ttaaattagg gtttatctat
    17521 ttttgacata aagtaaaatg gcacaactta acacttacat aaggaataga taatgttaca
    17581 actgagaaaa gccaatgaac gaggcgatgg ttcttttagc tggcttaaaa gctaccacac
    17641 tttttccttt gccaattatt acgacctaaa acatatccat ttttcacatt tacgggtaat
    17701 taacgaagat ttcattgcac ctaatcacgg ttttggcaag cacccgcacg ataatatgga
    17761 aattttaact tatatgttaa aaggacgtgt ggctcacgaa gacagtatgg gtaataaaac
    17821 cgaagtaaaa gctggcgaat ttcaaattat gtctgccgga accggggttt tccattcaga
    17881 aattaatcca gatccgaatg aaaccttaca cctttaccag atttggatta tcccaaacca
    17941 aaaagatgtg acccctcgct acaaccaaga tagatttgcc ccgaaagagg gagcaacctt
    18001 gattctttcg ccaaacgcag aagaaggttc atttaaaatt taccaagata tgaagctgtg
    18061 gcgttatcaa tacccaacag ccaaatcaga gcaactggca ttagagccaa accgcagtta
    18121 ctggctacaa gtggtgaaag ggaatctaaa catcaatggc gttgaacttt ccaccagcga
    18181 tgccttaggc attcgtcaag agaaagcact tgaaataaac actcaagatg acgtggaatt
    18241 tttactgttt gatctagtgt aaatacaaga gacaagcggt taaatttgta aaaaatatta
    18301 ctaattcagc tgcttgctct cattaaacat tatcgcacca aaattctcac tcctagcgtt
    18361 tcattttgtt gaagtaaggt atttatccgt gctgtttcca cacataccat attttgatac
    18421 gccgtttctg tcatcgcact aacggtatta tgccaaggat tccaaagtac ggtttcggta
    18481 gcattaatat gctcaacttt aatggtgcgc tgatttgcaa aatcttgaat aaaattcacc
    18541 gcttgtgccg gataaataca atccacattt tcacttatct tgcgaggtga tggcacttca
    18601 atttcttgat ttgtcaattt atcaaaacat tgtgttgcta agccttgtac ttccgttttc
    18661 gtaatatcac cgacctgaaa ataagtatgc aatgcagcct gtgccggctc cggtgctaag
    18721 tgagtaaaat acaactcaca gacttcgcct agtatcatct cgagttttgc ctgattttct
    18781 aaccccaaaa caacacgaat cccatctgct gaggaagtat gttccagcaa attccacgct
    18841 tgaatacggg ctgtgccgtg agcaggcttt ttgtctgtac caaaccaagg gtggcaaatc
    18901 ggaatgccgc cacgaatcgc cacacctgtt tggaaaggtt caatttcact taaccataat
    18961 acatcttgct gagtattttt aggttgccaa ctcagtaact gcgcaccttg caatgcaatt
    19021 ttagccttca ctttggagtg attaatctct aaaacatcca attcattata ttttgctaat
    19081 gctatttcag ggctgatcat tttgattcgt agattattca tcgtattgct cctcatcttg
    19141 aaagataaaa tgtgaagtgg atcacagaat taaagcttaa accgctacct ctttaaaggt
    19201 aatcgttata ataagggcat tctaacatag cgaaggagaa aaaaatgaaa acactcggcg
    19261 aatttattat tgaaaaacaa gcagaatacc caggggcaaa aggggaatta agtgggattt
    19321 tatcttctat tcgtttagcc gctaaaatta ttcatcgaga aatcaaccgt gccggtttaa
    19381 gtcaagatat tttaggtact gcaggttctg aaaatgtaca gggtgaagcc caaatgaaac
    19441 ttgatgtatt cgccaacgaa acgatgaaaa aagcgttact tgcacgtgaa gatgttgccg
    19501 gctttgcatc ggaagaagat gataattttg ttgcctttga taatgagcgt gggagaaatg
    19561 caaaatatat tttaatgacc gatccgcttg atggctcctc caatattgaa gtgaatgttt
    19621 ctgtgggaac aatcttctct atttaccgcc gtgtctcccc tatcggcacc ccagtaacac
    19681 aagaagattt cttgcaggaa gggcgtaaac aagttgccgc cggttatgtt acttatggtt
    19741 cttcaaccat gctggtttac accacaggca atggcgtgaa cggttttacc tatgatccgt
    19801 cattaggctt atttattctt tcacaccctg atctaaaaac ccctaccgaa ggaaaatatt
    19861 actccatcaa tgaagggcag tatgttactt tcccacaagg tgtgaaacgc tttattaagt
    19921 attgccaaga aaccgatgaa gccatcaaac gtccatactc ttcacgctat atcggctcgc
    19981 tggtgtccga tttccaccgc aatttattaa aaggcggtat ttatatttac ccaacctcca
    20041 ccgtatatcc aaaagggaaa ttgcgtttac tctatgaatg caacccgatt gcgtttcttg
    20101 ccgaacaagc cggaggaatg gcgacagatg gtattaatcc gattttagat attaagccaa
    20161 cagagctaca ccagcgtgta ccgttctttg tcggttcaac ctcaatggtc aaacaagcgg
    20221 gcgaatttat gcaagaattt gcaaaataat gctcctgctt atcactcaat aaaactttca
    20281 acaaagcagc tgcgtattcc gtagctgctt ttgcctatct taagattgta aatttgtata
    20341 aaaaacaggt aagacctctt gccaaataaa taattatcta tagaataccc caccttttta
    20401 ctccattaat attagcaatt tattaacatt ttatgataaa taaaaacttt ccactttctt
    20461 accttgccag ctttgtggca tttgctgtta gtttatctgc aacagcctct gttttcagag
    20521 atgatatcga tcttcaatac taccgtgatt ttgcggagaa taagggtaaa ttcaccgtag
    20581 gtgcaagcaa tattgaaatt aaagataaaa gtggcaatac attagatgca ctcttcccaa
    20641 atgtaccgat gccagatttt agtgctgcaa accgtaactt agggatagca actctagttg
    20701 caccgcaata tttagtcagc gttgcccata atacacaata caatactgtg gaatttggcg
    20761 ccccaggcac taatgccgat gcacaccact acacttacaa agtcgttgat cgtaacgact
    20821 atggaattgt tgaaggtggg caacatcaag attatcaagt gccacgtctc aataaattag
    20881 tcactgaggt cgcacctgca acagtgactg atctgggtaa taatgcttca gcctaccaag
    20941 atagtagtcg ttttactcac tttgctcgct taggctctgg tcgtcaaata gtcaaaaata
    21001 ccgagcataa agacaaccaa atttcaacat cttaccaata tttaaccggg ggagttcatt
    21061 taccaatcgc ggtacataat tccgattact ggctagattt tagaggaaat gcattaaaca
    21121 atagcccata tggagcatta actgcatttg gtactcgtgg tgatagcggt tcaggtgtgt
    21181 atggctacga tcagaaaacg aaacgctggc tactactggc tacttacacc tttggtacgc
    21241 ctgcaaacaa ctactacaac cgtgccggta ttatccgtca ggattatcac gataaacaat
    21301 ttgccgaaga tattgccggc acattaacca atgcgcaaca aaatgccgtt tttgaatggt
    21361 ctgcacaggg taaagacagt agcattggta ataaagggaa aaacttaacg gtttcgcttg
    21421 ctgatcgttc aattaaagac aatagcgctt ctccattagg ctatggtggc acacctcagc
    21481 tacaacttcc gcaagataac accggaaaaa ccctaaacat tgaaggacaa gatagcacta
    21541 tcgtattaaa aaccgatatt gaccaaggtg ctggcgcatt aaatttcaat gctaatgcaa
    21601 cagttcgccc tgaaaatgat caaagctggg taggagctgg aattgtagtg gcaaaaggta
    21661 aacaagttaa ttggcaagtc aaaaacccac aaggtgaccg tttatctaaa ttgggcgaag
    21721 ggacactaca tattaacggt aaaggcgaaa accttggtga cattagtgtt ggacaaggca
    21781 ctgtcatttt gacccaacaa gcgggtgaaa atggcaaaaa atctgcattt aaccaagttg
    21841 gtattgtgag cggccgttca accgttgtat taaacagtgc tgatcaagtc gatccaaata
    21901 agatttactt tggcttccgt ggtggtcgtt tagatctcaa cggcaacaac attgcgttta
    21961 atcgtattca aaatagtgat gatggtgcgc gtattgttaa taatcaccta caaaaagctg
    22021 caacactcac cattaatggc ccgaagcccc ctgaagcaac ggacttaaaa tggggaacgt
    22081 ggaaagaaaa cagtgctgat atttatgaat atatcaaccc acatgctaat aaccgtaccg
    22141 attactttac gctcaaaggc aatccaaacc aatatatgcc aacgaatggc gcaagtaatg
    22201 cccattggac cttcctgtct tctaacaagg atgcagcagt aaaacaagta ctcgcgcaaa
    22261 aaggtctgga gcatcgctac aatagcttta atggttttat tggcgaaaca gataacaccc
    22321 agcataacgg tcgtttgaat gtggtgtatg atccaaaagc ctctacacca ccggcaactg
    22381 cctctgaagt aacttggggt aaggggctag tagctggtgc agatatttat ctgttcacca
    22441 atccgaaaac gaaaattcgg gaatactttg cattaaaagg tgatccaaaa caacctgttc
    22501 ctcgcggtgg cttaagcagc gagcattggg aatttttagc tgcagatcgc aatcaagcga
    22561 tcaacaaagt attagcccgt aaaaacgcac caatagagca agaaaagctc aatagtattt
    22621 ataccttctc tggtggtttg aacttaaacg gcgatctaac tgtgaaagga ggtaaagtgc
    22681 tactttccgg cagaccgacc cctcacgctt atgatgcgat caataagcaa gatgtagttt
    22741 atgccgatga ttggcaaaat cgtcaattta aggctgataa tatgcagcta aaccaatacg
    22801 ctcagcttta tgttggtcgt aatgtctcaa acctgcaagc aaacttgtca gcgaatgacc
    22861 atgctcagct acatttaggc tttatcaacg agcaaactcc aagttgctac tattctgagt
    22921 acactggtaa aacaagctgt gatacacaag cggtcgtttc taatgaaatt tttgcaacac
    22981 tgcccacaac acaaattaat ggtgatgtca gcttggcaga acagagccaa ttacacatcg
    23041 gcaaagcgaa cctgattggc accattcaag cagcagcaac aacgagcatt cgtttagcta
    23101 accaagcaag ctggacaaac actggggata gccgtactgg caatttagtg gcagaaaacg
    23161 gttcaaccat caacctgaat gaaaaatttg taacaggcga gataccgact cgttttaata
    23221 cgttgattat tgacggtaat ttccaaggta atgccaaaat caactactta accgatattg
    23281 ctgctggcaa aggcgatcac ctacaagtaa atggtctcgc cgaggggact ttcactcttg
    23341 cattacgcaa cagtggcaaa gaagctgaag tggttagccc gttaagttta ttaaccttaa
    23401 cccatcaggc tcaggctgat aaagctaaag tttcactgga aaacggttat gttgatttag
    23461 gtgcatatcg ttatgtgctg gcaaatcgaa gcaacggcta tcgcttatac aatccgttaa
    23521 aagatgctaa agatcggaat cagtcgattg caacggcgaa agcggaatta gaccatgcta
    23581 ttgcagaagc ggataaacaa aaacaggaaa tcagccgttt gaacgcagaa gccgagaaag
    23641 agcgccaagc agagaaaaat gctaaacaag ccgctgcaaa cgcacaatct cagcttagcc
    23701 aagcaaatag cgaattaacc cgtttgcaac aatatgctga ttactaccgc cgttactatc
    23761 caacgtatta ccgccaaatc caagggcaaa ttacggtagc aaaacagaaa gtcacacaag
    23821 cgagtgctgc actcactaca gcagaaaaca atgctaaagc atccgctgcg caaattgcta
    23881 acgtagaaca agcggttgaa actgcacaaa atattgcaaa acaagtagaa gcaaaattag
    23941 ctaccttacg tataactgct ggaaatagtg aagcaatttt aaacgctgag gcactaaaac
    24001 tttgccaaga gaatggtgca aattgtgagc atctacaagc acacgcagac actgacagta
    24061 gtaatattca acaaagcgac tgggtaagcc aatatgccaa taccgctctt tccgagctat
    24121 cggcacaggc aaattctgcg ttgcaaatcg ggcaagactt agatcgccaa ctgttcgcaa
    24181 aacacgataa attccacgtt tggagcagta tcgaacatca aaaaaccgaa caccaatcgg
    24241 atttatatcg cccgtatgag caacaaacca acctcactca gttaggcata gaattaccgc
    24301 ttgcaaacgg tatcaatgcc ggtgtgatgc tatcccgcaa ccacgctaat gcggaatttg
    24361 atgagggagt gaacggtaaa tccaacttac tgatggcaag cctatatggt aaatggcatt
    24421 cggaaaacgg cactttcgtc agcctagacg gtagctacgg taaagcgaaa aaccgtatcg
    24481 acctgttcgg ggagaaccgc tttaaccgtc atattatggc gattggggca aatcttggac
    24541 ataacttcga cttagccggc gtacaagttc agcctgctgt tggtacacgt tactatcgct
    24601 tcagcgcaca aaattacaaa ctgggtgaag tagaagtccg cagcccgaaa gcacacttta
    24661 tggcctacca agcaggtgtg aaagtcagca aggcctttga cctctccagc tggaaagttg
    24721 agcctagcct tgccgcacat tatgtcgatg ccagcagcaa acgcttgagt gtggcagtca
    24781 atgacaatac ctttagccaa cgtttcggac gttatctgaa aactgaagtg ggcgtgggtg
    24841 ttacaaaagg tcaatggcaa ttaagctctc accttggtct attgaaaggt aacgaaatcg
    24901 gcaaacaaca ttttgccggc ttcaaactgg gatatagctg gtaattgcta ttagccccta
    24961 aactaagcaa tcgcttactt taggggcttt ttagtcaatt aattagccgg ctctttgctt
    25021 gcctctagcc actgccgaat aaaatcagca agctgttcaa catcattaat atccaaccga
    25081 ttttcccgct caagcggata atcggttgcg gtcgcgattg tccactggtc taacgccggc
    25141 aacggttttt caatttcttt acggtgtagt tgaattttcg gcattgtttc gtgcttaaag
    25201 ccttccacta aaactaaatc taccgtctct gggtcaaatt ttgcaattaa ttgtgaaaat
    25261 tcgaccgctt gtttagtttc tgctgcctgc ttagtttccg tcattaatgc ccaacgttca
    25321 tcacacacga ccatagtcgg gtttgctcct gcttctcgca agcgatagct gtcttttcct
    25381 tttttatcaa tatcaacatt gtggtgggaa tgcttaatca agccaacccg aataccgcaa
    25441 gcggtcaatt ttgggattaa tttttccaat aaggtggttt tgcctgtgcc gctatagcca
    25501 gtaatcgcca gggttttgat gggatatgga ttgaaagccg ttaaatcttc taaacaatta
    25561 aaattgcgaa atgcggcttt atatgccgag aaatccactg ccacactttt ttgggtttga
    25621 aaaaaccaca ataatcggcg ttcgccggag gctaaatacg ctcttaaatt ttccgccacc
    25681 gaacgatgca ccaaggcaac cgttgggtgt gggcggtcgc catcgtgagc ataggcaatt
    25741 tgagcctgat taatgcgtaa tgccgtgtgt aacttgtgca atagttgggt tggaataaac
    25801 ggcgtgtcac aaggcacaaa cagtaaatag tcgctctcaa tctgctcgaa cccggaaagc
    25861 attccactta gtgggccttg aaaatcgggc aagctgtctt ggtaataagg taattcaggg
    25921 taaagttgtt gatattgttc caccgaacga ttgatattga gccaaatatc ctcgatttgt
    25981 ggcgaaagtc gggctaacag gtgcgaaatc aacggttttt gatctaacag ttgcaaccct
    26041 ttttccgctc cattcattcg ccgagccaaa cctccggcta aaattaccgc tgaaattttc
    26101 tcttccattt ccctctccaa acctgaattt ttttgccaaa tgagggctaa aagtatatta
    26161 ttccgcttac tattcaacaa gttttttaag aggcatacta tgaaatgcaa acgtttagaa
    26221 gagctattgg aactgcttgg cgaacattgg cggaaaaacc ccgatcttca cttaattgat
    26281 attctgcaac agctttcggt ggaagtaagc gagccggata attttcatgc cctgcgtgac
    26341 gaggttttga tttatcagct caaaatgcga aacgccgata aatttgagcc gattccgggc
    26401 attaaaaaag attatgaaga tgattttaaa accgcattgc tccgagctcg tggaatttta
    26461 aacgattaag tttgtcttat ttctcactta tcatattttt gaaggaatca ttatgaaaaa
    26521 atttgcatta aaaaccgtac tggttgctct ttctgccctt tttgcattta acgcaaccgc
    26581 agttgcagca gatccaactg ccggcaaaga gtatattgag gtgcgtaaag ccccatcggc
    26641 tcaaaaagaa gtggtggaat ttttctcatt ctactgcccc cactgttacg attttgagct
    26701 aaattacaaa attccaagcc aaatcaaagc gaaattgcct gcagacagca aattagtgca
    26761 atatcacgtc aatttcttag gtcgccaatc tgaaaactta acccgtgctt gggcattggc
    26821 aatggcatta ggagcggaag ataaagtaaa aaccgccttg tttgaagccg ctcaaaaaga
    26881 tgcgtttaaa tcaatggacg atattcgtgc ggtcttcatc gctaacagca ttagtgcaga
    26941 acagtttgac agcggtatca acagctttgc agtaaacggt ttagtcaata aacaagttca
    27001 attagctgaa gacttccaaa ttcgtggtgt accggcgttt ttcgtgaatg gtcaatacca
    27061 gcttaaccta gaaggatttt ccgattcaag ctcgaccaat gattttatcc aacgctatat
    27121 tgacgctgtg gtcttcttga gtaagaaata atcgtcccca tattaaggag atggttttac
    27181 aagtgctgaa tagtaaagct attcagcctt ttttatatgc aaactcggag aacaaaatga
    27241 caaacttatc cattctcaac cttgtgccga ttcgtgaagg gcaaactgcc aaacaagcgg
    27301 tcgattctat ggtgaaatta gcaaaacacg cagaaaatat cggcattgaa cgctattgga
    27361 ttgccgaaca ccataatatg aaaaatcttg ccagttccgc cacgcaatta ttgattcaac
    27421 acgccctctc ccacaccgaa aaattaagag tcggctccgg tggcgtgatg ttacccaacc
    27481 acagccctta tattgtggca gaacaatacg gcacgcttga aacactctac ccaaaccgag
    27541 tagaactggg gcttgggcga gcccccggca ccgatatgcg aaccgcctct gccttacgcc
    27601 cagagtttgc ctttccccga tgaaatcagc gaattaaaag gctactttga cggtacaaac
    27661 cctgtttccg cctatccggc acaagggcta aatgtgccgt tttatattct aggctcaagc
    27721 cctgaaagtg cctatttagc ggctgaacga ggcttgcctt acgccttcgc ttcacacttt
    27781 gcccctcgct ttatggacga tgcaatccgc atttaccgct cacattttaa gccctctgat
    27841 gtgttagata aaccttatgt gattttaggt gtgaatgcca ttgtggcaga aaccgatgaa
    27901 gaagcaacac aactggcgac cacccaaacc cagtttttct taaatgtagt gaccaatgcc
    27961 caacaaaatc tgcaaccacc gctcgaatct gacgacaaag tgtgggaaaa ttttgtgaaa
    28021 gcagaaattg tgccgcattt cgggccggtt gcctttgagc aaaatgctct ataccgacaa
    28081 gagaaaaccg ttgtccgcca aatgaccgaa tgctccttaa ttggtagccc gcaaagcgtt
    28141 gaacaacaac ttaaagccct aaaagcacga gtggaaattg atgaaattat ggcggtaaac
    28201 tacattttcg atgagcaaaa acagcatcaa tcctacactt ggttaaaaca aattacggat
    28261 aaggtgtaat atgagcaaaa cgatgcaaca aaaagcggct gaggcacata atatgtgccg
    28321 gctaaaaggc gattctatgt tggataatgc agaccgccaa attgcctttg aagcggtgta
    28381 tgagagcgaa gaactggctc aacaagcggt cgaatttttc gcacaaaaag caaaatcggt
    28441 cgaaaccgaa ccttgtgaaa ttcaaagcga aattacacaa attgcagaag ggtttctgat
    28501 gaaaatgtgg atcactttca gctgccaagc agaagtgatt ctgttccaaa tggcagtaag
    28561 gtagatataa acaagcggtt atttttgatg aaatttttgc aaaaaatctt cagaaaataa
    28621 ccgcttgtat cattatgcct gtttaaccgc agccgattca ctacttggtt tacgccgttt
    28681 accgatattt ttggtatctt tgtggcggac ttttactttt ggttttgccg cttctttttt
    28741 cgcctctttt ttcttcttaa tgcgtgcttt ttctttcttg ctggtcacat ttagctcgcc
    28801 atctttcggg gctttggtgc gaggctctaa gccctcgata atgcgaggtt ttagtacttc
    28861 ttcggtgtaa cgtttaattt tgccgagtaa tttataatcg tgagcttcca ccaatgaaat
    28921 tgccgaacct tttttgccag cacgagcggt acgcccaata cggtgcaagt aagtatccgc
    28981 actataaggt aaatcgtagt tcagcacgaa atcaatatcg tctatatcaa tgcctcgagc
    29041 cgccacatcg gttgccacta acacattcac tacgccttct tttaaacggt taatagcttg
    29101 gttacgttgg gtctgagcca tttcaccttc gagataagta gaacgaattc cccgcttacg
    29161 caaggtttcg ctgagttctc gcacatcttc tcggcggcgg acaaacacaa tcgctctttc
    29221 caccgaaaat tcgctgataa tacgagctaa taatttggtt ttatgctcta cattatcggc
    29281 gtggtaatac cattgctgaa tttttttacg ctcacggcga cttggttcgg catcgacttt
    29341 aatcggatca tttaataatc gctcggcaaa atcctctaat aactcgccct cgagggtcgc
    29401 tgaaaacaac caagtatgct tacgccaacg ggtttctgcc gcaattttct ccgcatcttg
    29461 cccgaagccc atttgcaaca ttctatctgc ttcatcaaaa atcagcactt ccaccgctcg
    29521 gcagtcaaaa ttttcctctt taatgtattg cattaaacga cccggggtag caaccacaat
    29581 atcttgattt ttattaaaga cttcaccgtg attttgatac gccaccccac cggtaatagt
    29641 cgcaatgctc aactgagtaa atttagccag tgcttgggct tgctccgcca cctgcattgc
    29701 cagctctcgg gttggggtaa gaattaaaat gcgaggagcc cctggtttgc ggcgaggata
    29761 atctaataaa tgctgaattg ccggcagtaa aaaagcggcg gttttgccgg taccggtagg
    29821 ggctgaaccg agcagatcac gtccttctaa cgcagccgga atcgtggctt gttgaatagc
    29881 ggttgggcgg ttatagcctt tgtgtgctaa ggctttaagt aattgagggc ttaaatcaag
    29941 ctcctcaaac gtcattaatt gggtcatctc tgtttctcta cttgtaaatt tgccccagta
    30001 tatcacatta actgcttgcc gtgatggtga agaaatttat cctaaaaggt tgaaaaaatt
    30061 gttacactta cacagagccg tttaacggac aattcgctca cttttacttt atagaaggaa
    30121 cattatatgt ttgttgaaat ttatggacgt ttatcttgcc catactgcgt gcgtgcaaaa
    30181 acattagccg agaaaatgaa acaagaatta agcgattttg attttaaatt tattgatatg
    30241 atcgctgaaa atatttcaaa acaagaccta gagcctcgtg ttggcaagcc ggttgcaact
    30301 gtaccacaaa tttttgtgga taataaccac gttggcggtt gcaccgattt ccaagccttt
    30361 gtggaagaga aatttgggat taccgtatag ccaaaagccc gctaacaagc gggctttttt
    30421 atacaaaaat ttgcaaatta ttgttcttct ttcggcagac gtttaatcgc aaaaagtaaa
    30481 ccgccccaga taatcgtcat tgccaccacc atggtaataa ttgctgctga actcattact
    30541 catctccttt tggttcattt ttccacgcca tttttgatag caaataagcc accaccacta
    30601 agccgattgc cattccccag ccgaaggtgt ttacaaacca gcttgggtag ccttcataac
    30661 cttcacgata cactttggcg atttcgctga ataacataaa tgccagtacg ccggaggtaa
    30721 taacgataca taaacgccag ataaagccga ctttgaatga agaaacttcg ttcaggtgtt
    30781 tttcaagggt gcttaatttc tcgctggtga caatcgcaat caaggaaaca aacgccaccg
    30841 caacaatacc gaattggttt acgaatttat ccatcacatc aagcattggt aaaccggtgg
    30901 ttgtaccgaa tagcaagaca gataccacca tcatcggaat gccgactagt agcgtggctt
    30961 tcacacgacc tgaattgagt ttgtcttgca ccgctgaaat aatcacttca attaccgaga
    31021 taaatgaggt taatgccgca aaggtgagtg aaccaaagaa cagcacgcca actaatgccc
    31081 ccattggtgc ttggttaata atggttggga aagcgaagaa tgccaagccg ataccgcctt
    31141 ttgctacctc gttcacttct tgccctgcag ccgttgccat aaagccgagt gccgcaaata
    31201 cgccaatacc cgctaataat tcaaaaccac tgttcgcaaa acccaccact aagcctgaac
    31261 cggttaaatc ggtttctttt ttcaggtatg aagcataggt aatcataatc ccgaagcaga
    31321 tagagagtga gaagaagatt tgaccgtaag cggcaatcca cacacttgga tcagccaatt
    31381 tttcccagtt tggggtaaat aacgcatcta agcctttcgc agcacccggt agggttaatg
    31441 aatagccgac caacactaag aacatcacga tcaactgcgg cattagcagg tttgaggcag
    31501 cagaaatccc ttttttgatc cccatagcca acacagcaat agcaatcagc cataccgcaa
    31561 ttaacggccc tgtaaccata ccgacaaatt caaagctcac gccttgagta atatcgccca
    31621 tttttaagaa ttcaccgata aagaaatcca ccggtttatc gccccacgct ccgctgaatg
    31681 agaagtaggt gtaacttgct gcccagccga gtaccaccgc ataataaatc ccgatgatca
    31741 cgttgatcag cacttgccac caaccgaagg tttcaaattt cgagctgaaa cggcggaaag
    31801 cgagcggtgc accaccacga tatttatgcc cgatagaata atctaagaac agcagcggta
    31861 aacctgcggt caaaagggca atgatatacg gcagaataaa agccccaccg ccgttttcat
    31921 aagtagtata agggaaacgc cagatgttcc ctaagccgac agcggaacca atagccgcca
    31981 taataaatgc accacgtccg gagaacgttt ctctttgcgg tgcgtttgat gattgattag
    32041 acacggtaaa tacctcaaac tgataaagtt ttatataaaa aagaattgag ttaaatgtaa
    32101 attaatcaca ctttaagtgc ggaatatgcc caatttcagg tt
//
LOCUS       DANLZQ010000017        30174 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.017, whole genome shotgun sequence.
ACCESSION   DANLZQ010000017 DANLZQ010000000
VERSION     DANLZQ010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 30174)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30174)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30174
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.017"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            81..1070
                     /gene="dusB"
                     /locus_tag="PXE50_000723"
     CDS             81..1070
                     /gene="dusB"
                     /locus_tag="PXE50_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HDL5621656.1"
                     /translation="MQIGQYAIKNRIFLAPMAGITDQPFRRLCSQLGAGLTFSEMMST
                     NPDVWHTEKSRLRLAHHDEIGLNAVQIAGSDPVEMAKAAKINVEYGADIIDINMGCPA
                     KKVNKNMAGSALLRNPKLVAQILDSVVNAVDVPVTLKIRTGWDQENRNCLQIAKIAEQ
                     AGIKALTIHGRTRSCLFNGEAEYESIKAVKEAISIPVIANGDIDSAEKAKFVLDYTKA
                     DAIMIGRASFGNPWIFKEINDFFETGLSSPLSIDKKYQLMFKHIEDLHQFYGEEKGYR
                     IARKHVGWYTEKLNPESNFKRTFNTLSSTKEQLYALEDFVKSIHLESQLRKVG"
     gene            1075..1371
                     /gene="fis"
                     /locus_tag="PXE50_000724"
     CDS             1075..1371
                     /gene="fis"
                     /locus_tag="PXE50_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator Fis"
                     /protein_id="HDL5621657.1"
                     /translation="MLEQQPTQNPLTVTMLNAQAQQVNKPLRDNVKAALKNYLSQLNG
                     EDPTELYELVLSEIEHPMLDMVMQYTRGNQTRAATMLGINRGTLRKKLKKYGMG"
     gene            complement(1476..4262)
                     /locus_tag="PXE50_000725"
     CDS             complement(1476..4262)
                     /locus_tag="PXE50_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoferrin/transferrin family TonB-dependent
                     receptor"
                     /protein_id="HDL5621658.1"
                     /translation="MKYHHFRYSPVALTVLFALSHSYGAATENKKIEENNDLAVLDEV
                     IVTESHYAHERQNEVTGLGKVVKNYHEMSKNQILGIRDLTRYDPGISVVEQGRGASSG
                     YAIRGVDKNRVSLLVDGLPQAQHYHTLGSDANGGAINEIEYENIRSIELSKGASSAEY
                     GSGALGGAIGFRTKDAQDIIKEGQHWGLDSKTSYASKNSHFLQSIAAAGEAGGFEALV
                     IATHRHGKETKIHSEANKLKHNIRRITGFENRYDLYPNSAQNAPGGSFFIVEDTCPTL
                     DCTPRARVKLNRDNFPVRTFPEYTPEERKQLEQIPYRTEQLSAQEYTGKDRIAPNPLD
                     YKSNSVFMKFGYHFNSSHYLGAILEDTKQRYDIRDMQTPAYYTKDDINLSLRNYVYEG
                     DNILDGLVFKPRIPYGLRYSHVKFFDERHHKRRLGFTYKYKPENNRWLDSIKLSADKQ
                     DIELYSRLHRLHCSDYPVVDKNCRPTLDKSWSMYRTERNNYQEKHRVIHLEFDKALNA
                     GQGVFKQTHKLNLGLGFDRFNSLMDHGDMTAQYTKGGYTSYRGRGRLDNPYIYRRDPR
                     SIETVSLCNNTRGDILNCEPRKIKGDSHFVSFRDLVISEYVDLGLGVRFDQHRFKSDD
                     PWTLSRTYRNWSWNGGITLKPTEFVSLSYRISNGFRVPAFYELYGKRNHIGLKDNEYV
                     QRAQRSHQLEPEKSTNHEIGVSFKGQFGYLDVSYFRNNYKNMIATACKRIIQKSHCFY
                     NYHNIQDVALNGINLVAKFDLHGILSMLPDGFYSSVAYNRVKVKERKLTDSRLDSVND
                     PILDAIQPARYVLGFGYDHPEEKWGIGITTTYSKAKNADEVAGTRHHGIHRVDLGGKL
                     TGSWYTHDITGYINYKNYTLRGGIYNVTNRKYSTWESVRQSGVNAVNQDRGSNYTRFA
                     APGRNFSLAFEMKF"
     gene            complement(4356..6107)
                     /locus_tag="PXE50_000726"
     CDS             complement(4356..6107)
                     /locus_tag="PXE50_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HDL5621659.1"
                     /translation="MFKLKSSFVLLNAALLAACSSNGGSFDVQSAKVESQTQTTPKKP
                     SLQDDNSNARRTVSASETEALLQPGFGFSAKIPRRNLFPQGKEDVAPIGDIKEITGDL
                     TKIPYEEEVKAYGSSADGFSHTHDRNHKLYTRDFNFVRSGYVLHSGAKPEIKPKEILR
                     TGAHGYVYYLGIEPAKAIPTQKATYKGYWDFTTDARKGRDSKYFSNSAGINIGATPEN
                     SYDINVDDSEKPMGHTGEFTADFANKTLTGTLVRNGYVSRSKEQKITTIYDIDAKIKG
                     NRFSGKANAKNTDDPYFGKSSTTLEGGFFGGKAQELAGKFLADDKSVFVVFAGKRDAK
                     KDDSESAFDAFKIKLKDLNKSEMDTFGNATHLIINNKQIPLIAEGKKSFAEMKFDDLV
                     TRTIDDKTYRVSVCCNNLDYVKFGTYSEGNNSDTAHQYLVGERTAVADLPTGTVKYRG
                     TWDGVMYSKSGSAGAESPSNSESGTRSLFDVDFVNKKINGKLIANDGVEERPMLTLEG
                     NLKGNGFAGTAKTGNSGFNLDPKSTNGGTVVHINTQFEGGFYGPKATELGGIVHSAET
                     DKDRVSITFGGKRQIEK"
     gene            complement(6528..7175)
                     /gene="rnt"
                     /locus_tag="PXE50_000727"
     CDS             complement(6528..7175)
                     /gene="rnt"
                     /locus_tag="PXE50_000727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010130043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease T"
                     /protein_id="HDL5621660.1"
                     /translation="MEQTTEQIDYKLLKHRFRGYLPVVIDVETAGLNAQTDALLELAA
                     ITLKMDEQGYLVPDQQCHFHIAPFEGANINPESLKFNGIDIDNPLRGAVAENIAIPEM
                     FKMVRKAMKEQGCQRAVIVAHNAAFDQGFLQAAIKRINAKRDPFHPFAMFDTATLAGF
                     MYGQTVLVKACQVAKIPFDGKQAHSALYDTERTAELFCAMVNRLKDLGGFPPLSD"
     gene            complement(7260..7667)
                     /gene="gloA"
                     /locus_tag="PXE50_000728"
     CDS             complement(7260..7667)
                     /gene="gloA"
                     /locus_tag="PXE50_000728"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HDL5621661.1"
                     /translation="MRILHTMLRVGDLERSIKFYTDVLGMRLLRRSENEQYKYSLAFL
                     GYADESESAVIELTYNWGVDKYELGTAYGHIALGVDDIYKTIEDVRAAGGKITREPGP
                     VLGGTTVIAFAEDPDGYKIEFIENKDAKAALGN"
     gene            7757..8572
                     /locus_tag="PXE50_000729"
     CDS             7757..8572
                     /locus_tag="PXE50_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621662.1"
                     /translation="MAHDHDSPSKLEISTHAALPMVLMLFIEMALNFYSAPKNSIFIS
                     PYLLAFFVTSLISFLVLWKGEICRGQASRLSFILPFLLIFAVGNFLYSIGFTPKHNPM
                     AVASIAAVFACLIYFRLPEDQTLYNTLMYCGLAISSIGIIQYLAIYWFELPSLFNGIR
                     ANNFAQVLLGILLAGWYLMLAKSRLDVFLKLLVKTALVVLILNYCWTAFVLYQHLQIM
                     PDMPLLSFIIYFAAQFVILLMLAWLLLGKNIKNPTAWTVATLLAILYPFANVV"
     gene            8576..9322
                     /locus_tag="PXE50_000730"
     CDS             8576..9322
                     /locus_tag="PXE50_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621663.1"
                     /translation="MKRALKFFGIATVLSVVAIYYFLMPSHYLATPINWILPKAWKVQ
                     LPQGLNLNWQGSSLAQFQLSYRDCPLLSADKTDLGWIEKNHLSVDKLDIDYRCLALFP
                     QNEHSNSDTSLNALLAVIPDGEATIHALNWKNLPTDFNPRLQRLFEQTAIKLSLSKGE
                     IQATAAQQAVKFAANFANGRLNADLSYQPNEKEQHNLRISAEIEDNFTQLPPTISAEY
                     DWQLSYEIIANKALQKGALFSVGKKMPHKS"
     gene            9508..11283
                     /locus_tag="PXE50_000731"
     CDS             9508..11283
                     /locus_tag="PXE50_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbH domain-containing protein"
                     /protein_id="HDL5621664.1"
                     /translation="MPLKTAIRISLLSQNSWGKGNIVISNSDGEITEKGLNLPLRLTG
                     NIKHGNFILYSSVPLDFQGNFDDLSVKFLPSSLLRLTGKERYLTIEDLRFPLAGIKID
                     KHGIHGRLHAILRGQSPDFNNIEFHLDGQAQNFKAGALDFFQDPKDANAVKDSWKWRI
                     WGASILKAFNSKVNLSGRGQWHKQLVRLEELKGDLATVKLADTTISKITLNNTQAIRF
                     NVKKFTLDGAVMLQSPEIAFSYGGVLPKPRVNLAFDGEVEKLRFKGAVNTTELGPLKL
                     FARRQLSQDASQIIGKLYWPEQSAQGFQPLFPFRSQWVINNGTIRGETAFSAGSKNGL
                     IAGGHLAIRNGGLSLPNGEAKGIEFSLPYRYQNGRFHFGAKKPLDVKIAQIKLGDLAL
                     DNASMKLNGYYPYTKAKPLNLNQLSFDLFGGKLNVKRFALPQTELAYLNLERIDFEQI
                     LQFMQYQQIDLKGKANAILPFWLSGKPCYICDGLLTQAETSYLTFTPELLSEMQKSGY
                     TEQILLHLVDKSTINDFRSLINVGPKGDLVLDGKLKLSSNQNKSKVNLNYNHRENLFD
                     LWHLINYGSQFEQKLENYLYQKLER"
     gene            11301..11495
                     /locus_tag="PXE50_000732"
     CDS             11301..11495
                     /locus_tag="PXE50_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnbE family lipoprotein"
                     /protein_id="HDL5621665.1"
                     /translation="MKPATFYFAIFLLNLTACTPKVQLETPSEGITINMNVVVDHRID
                     VKMDEKSRAVITKSENKTKN"
     gene            complement(11492..11965)
                     /gene="folK"
                     /locus_tag="PXE50_000733"
     CDS             complement(11492..11965)
                     /gene="folK"
                     /locus_tag="PXE50_000733"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HDL5621666.1"
                     /translation="MQTVYIALGSNLENPLEQLKQAVEKLKKFANEFEISPFYGSKPV
                     GPQDQPDYVNAVAKFSTDLSPTALLDKLQSIENEQGRVRVRRWGERTLDLDIILYGNQ
                     QIQTERLNVPHIEMKNREFVIVPMFDLTPDLVLPTGEKLADIYAQFKDHQMIIFS"
     gene            complement(12168..13499)
                     /gene="pcnB"
                     /locus_tag="PXE50_000734"
     CDS             complement(12168..13499)
                     /gene="pcnB"
                     /locus_tag="PXE50_000734"
                     /EC_number="2.7.7.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HDL5621667.1"
                     /translation="MLHKKFAVNASQYRISPKDFPKNAISIVDKLQIAGYEAYIVGGC
                     IRDLLLEKKPKDFDIATNARPEEIQRIFGRQCRLIGRRFRLAHIVYGREIFEVATFRA
                     GHESHRNDKISKVSDEGMLLRDNVYGTLREDAERRDFTVNALYYDIKRNLIFDFFNGI
                     EDLRAGKLSLIGEPTIRYQEDPVRMLRAVRFMAKLDMFLDKATASPIRDMAVLLTNIP
                     AARLFDESLKLLQTGAGLKTYQLLREYELWQFLFPVLPAFFTAKGDSYAERMITKALN
                     STDERIADKLPVNPAFLFAALLWYPLREKMEQLKNEGGFNSYDAMMLAANDVLAESCN
                     AIALHRRHTSVIRDIWALQFQMMKRSGNRPQQTLEHVKFRAGFDLLVMRAEIEGGDLV
                     ELSAWWHEYQFSNEGQRTELLKSVRHLGNVPSEKKKTRRRRTFKKKPKVNG"
     gene            complement(13744..14190)
                     /gene="dksA"
                     /locus_tag="PXE50_000735"
     CDS             complement(13744..14190)
                     /gene="dksA"
                     /locus_tag="PXE50_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HDL5621668.1"
                     /translation="MTQAAKTSLGLLALAGVEPYELKKDEEYMNEAQREHFTKILKAW
                     HSQIMEEAERTKSQLQEDMTNFADPNDRASQEEEFSLELRNRDRERKLLKKIEQTLYK
                     IQEDEYGYCETCGVEIGIKRLEARPTADLCIDCKTLAEIREKQLGL"
     gene            complement(14440..15393)
                     /gene="thiB"
                     /locus_tag="PXE50_000736"
     CDS             complement(14440..15393)
                     /gene="thiB"
                     /locus_tag="PXE50_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate binding
                     subunit"
                     /protein_id="HDL5621669.1"
                     /translation="MKFILSSLALLSASVYANQPTLTVYTYSSFASEYGPAPKLEQNF
                     EKECGCDVKFVPLDDSVTMFNRLRLEGAKTKADVVVGIDNFLQPEAEKSGLFAEFEAK
                     TKLETQQKIFFPYDTGSYAFIYDKEKLKNPPKSLKELVERQDLKVIYQDPRTSSVGRG
                     FLMWVNQVYGDEAPTAWKTLAKHTVTVGKGWSETYGAFLKGESDLVLSYTTSPLYHKW
                     HENTDKYVAAPFEEGHLVQVENAAIVKSSQQKALANQFLEFLHKPESQHIISYHNVMN
                     PVLTDGVDPAFAAMPTYKTIEFTPPTTETIQKWLADWSKSW"
     regulatory      complement(15437..15580)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            15864..16850
                     /locus_tag="PXE50_000737"
     CDS             15864..16850
                     /locus_tag="PXE50_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HDL5621670.1"
                     /translation="MSQLIRTLKGHIRDEIIKKGGWVNAHAHADRAFTMTPEKITVYQ
                     NANLQQKWDLVDEVKRNSSVEDYYRRFSQAIELMISQGVTAFGTFVDIDQVCEDRAII
                     AAHKAREVYKNDIILKFANQTLKGVIEPNAKKWFDIGSEMVDMIGGLPYRDELDYGKG
                     LEAMDILMDKAKSLGKMLHVHVDQFNSPKEKETEQLCDKSIEHGMQGRVVAIHGISIG
                     SHPKEYRKMLYQKMRDSQMMVIACPMAWIDSGRKEDLQPFHNALTPADELIPEGITVA
                     IGTDNICDYMVPLCEGDMWQELSLLSAGCRFTNLEEMANIASINGRKVLGLV"
     gene            complement(16904..17323)
                     /locus_tag="PXE50_000738"
     CDS             complement(16904..17323)
                     /locus_tag="PXE50_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF937 domain-containing protein"
                     /protein_id="HDL5621671.1"
                     /translation="MLGNILGSLASSVLSGNNQSTATQLIQNLLASQGGIEGLIAKFQ
                     QGGLDDVLRTWISSDEDNAPVSGEQISNVFGQENIQNVAQEAGVDAADASDLLAQFLP
                     KIVDTLTPNGNVEDLKNFDANDLLAQAAKGILGNLFK"
     gene            complement(17401..18156)
                     /gene="kdsB"
                     /locus_tag="PXE50_000739"
     CDS             complement(17401..18156)
                     /gene="kdsB"
                     /locus_tag="PXE50_000739"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HDL5621672.1"
                     /translation="MKFTVIIPARYASSRLPRKPLLDIAGKPMIQHVWEKAQLAGASR
                     VIIATDHPEIEALAQSFGAEVCMTSEKHNSGTERLAEVIEKMQIADSEIIVNIQGDEP
                     LIPPVIVTQVAQNLDAYQVNMATLGVKLATREELFNPNAVKVVADKNGMALYFSRASI
                     PFARDSFPDCDDSFVAAQGYLRHIGIYAYRAGFVKQYVAWQPTQLEQLESLEQLRALW
                     HGEKIHIEPAKEAPQVGVDTPEDLERVRAILAR"
     gene            complement(18166..19119)
                     /gene="trxB"
                     /locus_tag="PXE50_000740"
     CDS             complement(18166..19119)
                     /gene="trxB"
                     /locus_tag="PXE50_000740"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HDL5621673.1"
                     /translation="MTTKHTKLLILGSGPAGYTAAVYAARANLNPVLVTGMQQGGQLT
                     TTDEIENWPGEFEQITGTELMNKMLKHAEKFETEIVFDHIHSVDLSKRPFTLNGDLYT
                     FTCDALIIATGASAKYLGLPSEEHFKGKGVSACATCDGFFYRNKPVAVVGGGNTAVEE
                     ALYLANLASEVHLIHRRDSFRAEKILLGRLQKRIEEGKIILHTDRTVDEVLGDNMGVT
                     GLRLKSTKEELSEEIKVDGFFVAIGHAPNTAMFEGQLELENGYIKVKSGLEGNATATS
                     VEGVFAAGDVMDHNYRQAITSAGTGCMAALDAERFLDAQEA"
     gene            19286..20356
                     /gene="dhaK"
                     /locus_tag="PXE50_000741"
     CDS             19286..20356
                     /gene="dhaK"
                     /locus_tag="PXE50_000741"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012073177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /protein_id="HDL5621674.1"
                     /translation="MKKLINSIETVLDEQLSGFVKAHSDLTLNTEPVYIYRTTPSNQP
                     KVALISGGGSGHEPMHAGFIGKGMLDGACPGAIFTSPTPDQMFECGLAVDRGEGVLLI
                     IKNYTGDVLNFETATELLADSGVKVATVLVDDDVAVKDSLYTAGRRGVANTVLIEKLL
                     GAAADKGYNLSELAKLGHQLNNNGHSIGIALSACTVPAAGKPSFTLAENEMEFGVGIH
                     GEPGIERRPFENLDSTVKQMFETLIAHGDYQRKIRHWNTQTQQWDEIEESKVALKKGD
                     RVIALVNNLGAVPLSELYAVYDALEKECQTFGLSIERSLVGSYCTSLDMQGISITLLK
                     VDEDILKLWDAPVNTPAMRWGE"
     gene            20377..21003
                     /gene="dhaL"
                     /locus_tag="PXE50_000742"
     CDS             20377..21003
                     /gene="dhaL"
                     /locus_tag="PXE50_000742"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase ADP-binding subunit
                     DhaL"
                     /protein_id="HDL5621675.1"
                     /translation="MTISKQQILKWLENCQQVMTEKRDYLTELDTVIGDGDHGLNMQR
                     GFSKALEKAHTVQDKDIGTLLKTVGMTLLSQVGGASGPLYGSFFIKAAQGATGKEQLS
                     FNELLALLQQGAEAIVQRGHAQVGDKTMCDLWLPLLEDLAQADSTQPIAQILLQAVEK
                     AENFANQTAPLMAKKGRASYLGERSIGHKDPGATSSYYIFKALAEALQ"
     gene            21013..21420
                     /gene="dhaM"
                     /locus_tag="PXE50_000743"
     CDS             21013..21420
                     /gene="dhaM"
                     /locus_tag="PXE50_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS-dependent dihydroxyacetone kinase
                     phosphotransferase subunit DhaM"
                     /protein_id="HDL5621676.1"
                     /translation="MVNLVIVSHSAKLAEGVGEILAQMAQGGCKIALAGGIEDTSNPI
                     GTDAVKIMQAIESVFSPDGVIVFVDLGSAILSTQTAIDLLEPELAEKVIISYAPLVEG
                     AFAAVVAASAGDSLEAVLNEANEAAALKQEQAN"
     gene            complement(21460..22305)
                     /locus_tag="PXE50_000744"
     CDS             complement(21460..22305)
                     /locus_tag="PXE50_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone YbbN"
                     /protein_id="HDL5621677.1"
                     /translation="MDYFVNVNEQNFSEVWAAAAQVPTVFHFISPREVASLEMDALLR
                     RISDENPNQFLLATVNCDEQQALAAQFRIQQIPTLYLFAGGQPIDAIQGAVSEQELRI
                     RLANILPKEEELKFQQALELLQDQRYTEALPLLKSAWEMTDKKNSDFALLYAETYIAM
                     KSVEEAREILKAIPIQDRDSRWHGLQAQIELLEQASESPELQQLQADYANSKTPEIAI
                     KLANQLHQAHKNEEALTLLFDWLKSDLNVANGEVKSQFLAILSALGTDPIVPKFRRQL
                     YSLLY"
     gene            complement(22349..22675)
                     /gene="glpE"
                     /locus_tag="PXE50_000745"
     CDS             complement(22349..22675)
                     /gene="glpE"
                     /locus_tag="PXE50_000745"
                     /EC_number="2.8.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase GlpE"
                     /protein_id="HDL5621678.1"
                     /translation="METTFKEISPQQAWELIENEGAVLADVRDARRYVYSHPQDAFHL
                     TNQSYGKFLDEVDYDEPVVVICYHGVSSQSTAQFLIEQGFENVYSVKGGFEAWERNGL
                     PIETSY"
     gene            22826..23284
                     /gene="exbB"
                     /locus_tag="PXE50_000746"
     CDS             22826..23284
                     /gene="exbB"
                     /locus_tag="PXE50_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HDL5621679.1"
                     /translation="MEQLFQFLEHHTDFVILGLLGLLSVICLWKAIERIMFYSKVDIS
                     KYDTLEELDIDLTHNLTTISTIGSNAPYIGLLGTVVGILLTFYHLGQSGGDIDAASIM
                     VNLSLALKATAVGILVAIIAMVFYNGFGRKVEENKLKWLALQSKKPHQAV"
     gene            23321..23758
                     /gene="exbD"
                     /locus_tag="PXE50_000747"
     CDS             23321..23758
                     /gene="exbD"
                     /locus_tag="PXE50_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HDL5621680.1"
                     /translation="MKKFDEINIIPFIDIMLVLLAIVLVTASFISQGKIQVNVPKAST
                     TQPMKADDLAKLLTITENNEFFFNDQAITKEQLIAEVATWDKSQKVSLKVDGAVAFEK
                     FVELTDILSANEIKNVAIITKKETAPAPSSTPGSPAQVPAVAP"
     gene            23774..24685
                     /locus_tag="PXE50_000748"
     CDS             23774..24685
                     /locus_tag="PXE50_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDL5621681.1"
                     /translation="MKKKHSRIGLLASLAIHTALIGGTFAWLHNHKVEKIAEQNSLSM
                     EMVAALLEQPQVAVAPDPITEEVKEIEPEKAEVPPEPKLTPEPTPEPEAIPDPTLNPK
                     KEKPKEEKRKERHHHKHKHRHKEKREELQEQEKPKDKPKERPKHHHKHIKALERGPEI
                     KQGIVAKAIPNAAEGEKVVAGVVGGQKNGSPNSTSTTGSANTGASSGNASELAAYKVA
                     LQRALQRKANNSYPQREKMMRKTGTVTIKFTITSSGSITNVSVLNSSGNSNLDNAAVR
                     SAEGLSMPPPPAGFPPTVTVPVRFALE"
     gene            complement(24754..25635)
                     /gene="cysZ"
                     /locus_tag="PXE50_000749"
     CDS             complement(24754..25635)
                     /gene="cysZ"
                     /locus_tag="PXE50_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate transporter CysZ"
                     /protein_id="HDL5621682.1"
                     /translation="MSSVFSEPQNQVGLGFHYFIYGWRLLLQRQFLPFVIFPILINTV
                     LMVGLIWGFFANIGGLLDMLLPSWLEWLSFVLIPLIFLMILVGFYFAFTTLANFVAAP
                     FNALLAEKVELQLTGEPLGDMSFGAMLKDVPRMLKREWQKMMYSIPRLIALFVLGFLP
                     VVGQTVAPVLTFIFGAWLIAIQYCDYPFDNHKISFQRMRNALSQSRTLNFTFGALVSL
                     FTMIPFVNLVVMPVAVCGATALWVKEYRNFFLNNQTGEFSKADYTFTKVNSTSLSTET
                     RTGEVSPNVRNGDIRKQ"
     gene            25747..26649
                     /gene="zipA"
                     /locus_tag="PXE50_000750"
     CDS             25747..26649
                     /gene="zipA"
                     /locus_tag="PXE50_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA"
                     /protein_id="HDL5621683.1"
                     /translation="MELHIIFFILAGLLIAVLIGFSLWSARREKSNIFSNTFSTRPIA
                     VPPQNNKMSNSIPTSLQPQNEDYQAMSVPEENPQQIQQEVESSLQNIKISLPGGNPQQ
                     QPEQIQPIQSVAEPTVSTYGQKISNQQHIQYNTPDFANPMVNTVVEETPQAVAIEPQE
                     TQSAEEENPFVTLYLYAPQNEAFRGDFVVHYLEEVGLRFGEHQIFHRHQHIDDSLSPI
                     IFSAANLMNPGTFDLNNISNFATAGLVLFMQLPTEGNDVANMKLLISNAEHLAASLGG
                     FLYDDNQQPFGEESRQRYMQRVMH"
     gene            26714..28771
                     /gene="ligA"
                     /locus_tag="PXE50_000751"
     CDS             26714..28771
                     /gene="ligA"
                     /locus_tag="PXE50_000751"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HDL5621684.1"
                     /translation="MSLFNQTSLFEENATPELVEKIETIRQTLRQYEYEYHVLDNPSV
                     PDAEYDRLMNELKNLEWQHPELISADSPTQRVGAKPLAGFAQVTHEIPMLSLDNAFSD
                     EDLDGFLRRMESYITASPSQLEFCCEPKLDGLAVSILYENGILTRAATRGDGTTGEEI
                     TANIRTIRNIPLKLNTTNPPARLEVRGEVFMPQSGFNELNEKALAKGEKTFANPRNAA
                     AGSLRQLDPKITRQRPLVLNAYGIGVYESDDELPATHFERLQWLKSLGIPVNNEIRLV
                     QGKAALLAYYAEIQAKRPTLGYDIDGTVLKVNDIALQEQLGFISRSSRWAIAYKFPAQ
                     EEMTILKEVDFQVGRTGAITPVAKLEPVFVAGVTVSNATLHNGDEIERLGIVIGDTVI
                     IRRAGDVIPQITGVMLERRPENAKKIEFPTACPICHSAVTRVEGEAVARCTGGLFCEA
                     QRKEALKHFVSRKAMDIDGVGEKLIEQLMARELIETPADLFKLDHTTLMRLERMGEKS
                     AQNALNSIEKAKNTTLPRFLFSLGIREVGEATALNLANHFGSLEAIRQATFEQLKEVQ
                     DVGEVVANRIVSFWQEPHNVEVVEDLIAQGVRWENVVKAEIVDNPLKDKNVVLTGTLT
                     QLTRDEAKALLQSLGCKVSGSVSSKTDYLIAGEKAGSKLAKAQELGIQILSEQQFIEL
                     TQH"
     gene            complement(28834..30102)
                     /locus_tag="PXE50_000752"
     CDS             complement(28834..30102)
                     /locus_tag="PXE50_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HDL5621685.1"
                     /translation="MTQQIEHSTWQSKFAAMGPGILMASAAVGGSHIIASTQSGAIYG
                     WQLAIIILLANLFKYPFFRFGVQYTLASGKTLLEGYKEKGKFYLIIFFILNVFAAMIN
                     TAAVAIVSAAILKFIFSALGIPLDLSIPMAGTIVIVVTWGILLLGQYKFLDTLSKWIM
                     IALTISTVSAVIIAALKGGVEIAPDFVEPSPWNLAALVFIVALMGWMPAPIEISAINS
                     MWVIAKKRLSKVNYEDGIFDFNVGYIGTAILAIVFLALGALVQYGSGEKVEQAGVAYI
                     AQLIKMYAFAIGDWSKLLIAFIAFMCMFGTTITVIDGYSRANAEALRLISGRKQHSQT
                     ELSIWMTVTALIGILIISQFMSDVAKMLQFAMISSFVSTPVFAWLNFSLVLKGEHRAK
                     GWLFWLAVIGLIYLTSFTLLFLAQQFKLIG"
BASE COUNT         9153 a         6489 c         5829 g         8703 t
ORIGIN      
        1 aagtacggta tttaccgtac tttttatttg gatatccctc tggttaaaat tacttcaaat
       61 ttgttaataa aaggttaaaa atgcaaatag gacaatatgc aatcaaaaat cgtattttcc
      121 ttgcacctat ggctggaatc acagatcagc cttttcgccg cttatgtagc caacttggag
      181 caggtttaac attttcagag atgatgtcta ccaatcctga tgtatggcat actgagaaat
      241 cacgattgcg gttagcacac cacgatgaaa taggcttaaa tgccgtacaa attgcaggtt
      301 ctgatcctgt tgaaatggca aaggctgcaa agataaatgt tgagtatggt gccgatatta
      361 ttgatattaa tatgggttgc ccggcaaaaa aggtgaataa aaatatggca ggctctgctc
      421 ttttacgtaa ccccaaatta gtcgctcaaa tattagattc tgtagtcaat gccgttgatg
      481 tccctgtgac actaaaaatt agaacaggtt gggatcagga aaatagaaat tgtctgcaaa
      541 ttgcgaaaat tgcagaacaa gccggcataa aagctctcac tattcacggg cgtactcgaa
      601 gctgtttatt taatggcgaa gctgaatatg aaagtattaa ggcagtaaaa gaagcaattt
      661 ctatcccagt gatagcaaac ggagacattg actctgcgga aaaagcaaag tttgttctcg
      721 actataccaa agccgatgca atcatgattg ggcgcgctag ctttggaaat ccttggatat
      781 ttaaggaaat taatgatttt tttgaaactg gattatcttc accattatca attgataaaa
      841 aataccaatt aatgtttaaa catattgagg atttgcacca attttatggt gaagaaaaag
      901 gttatcgtat tgcacgaaaa catgttggtt ggtataccga aaaattaaat ccggaatcaa
      961 attttaaacg cacttttaat acactaagtt ccacaaaaga gcaactttat gcattagaag
     1021 attttgttaa atcgattcat ttagaatctc aattaagaaa agttggataa aaaaatgtta
     1081 gagcaacaac ctacacaaaa cccattaaca gtaacaatgt taaatgcaca agcgcagcag
     1141 gttaataaac cacttcgcga taatgtgaaa gcagcattaa aaaactattt atctcaatta
     1201 aatggtgaag atccaacaga attatacgaa ttagtattat ctgaaatcga acacccaatg
     1261 ttagatatgg tgatgcaata tactcgcggc aatcaaactc gtgcagcaac aatgctaggc
     1321 attaaccgtg gcacattacg caaaaaatta aaaaaatacg gtatgggtta atctaaccga
     1381 ccgttaaaac acgattttaa ttcgtatgta attagttaga gccaacaaaa aacgctgaat
     1441 atactattca gcgtttttct attttatttt gccgtctaaa acttcatttc aaatgctaaa
     1501 ctgaaatttc tccccggagc ggcaaatcga gtgtaattgc taccccggtc ttggtttact
     1561 gcattcacac cggattggcg cactgattcc caagtggaat atttacgatt agtcacatta
     1621 taaattcctc cacgtaaggt gtagttttta taattgatgt aaccggtaat atcatgggtg
     1681 taccaagaac cggtcagttt gccacctaaa tcaacgcgat gtatgccgtg atgacgtgtg
     1741 cctgccacct catcggcgtt tttggcttta gaataggtgg tagtaatgcc aattccccat
     1801 ttttcttctg ggtgatcgta gccgaatcca agcacatagc gtgctggctg aatcgcatct
     1861 agaataggat cgtttacgct atcgagtctt gagtcggtta gtttccgctc ttttactttt
     1921 acacggttat aagcaactga tgaataaaaa ccatctggca gcatagataa aataccgtgt
     1981 aagtcaaatt tagcgactaa atttatcccg tttagtgcta catcttgaat attatggtag
     2041 ttatagaaac agtgtgattt ttgtattatt cttttacatg ctgtcgcaat catattttta
     2101 tagttattac ggaaatagct cacatcaagg taaccaaatt gacctttaaa gctaactcca
     2161 atctcatgat tagtcgattt ttctggctct aactggtggc tacgttgcgc gcgttgcaca
     2221 tattcgttat ctttaagccc aatatgatta cgtttaccat aaagttcata gaatgcaggc
     2281 actctaaaac cgtttgaaat gcgataagaa agcgatacaa actctgttgg tttaagcgta
     2341 atcccaccat tccaagacca atttcgataa gttcggctaa gtgtccacgg atcatcagat
     2401 ttaaatcgat gttgatcaaa acgcacccct aatcccaaat ccacatactc gcttatcact
     2461 agatcgcgga agctaacaaa atggctatcg cctttaattt tacgcggttc acagtttaag
     2521 atgtcgccgc gtgtattatt acacaaagat accgtttcaa tactgcgtgg atcgcggcga
     2581 taaatatatg gattatctaa acgccctcta ccgcggtagc tggtataacc gcctttggta
     2641 tattgggcag tcatatcccc atgatccata agcgaattaa atcgatcaaa gcccaaccct
     2701 aaattcagtt tgtgggtttg cttaaatacg ccttgaccag catttagcgc tttatcaaat
     2761 tctaaatgaa tgacacgatg cttttcttgg taattattac gctcagttcg atacatagac
     2821 caagatttat ccaaagtcgg gcggcaattt ttatctacca caggataatc gctacaatgc
     2881 aagcgatgta gccggctata tagttcaata tcttgtttat ccgcactgag tttaatgcta
     2941 tccaaccagc gattattctc tggtttatat ttataggtga atcctaaacg acgtttgtgg
     3001 tgacgttcat caaaaaactt cacatggcta tagcgcaacc cataagggat ccttggcttg
     3061 aacactaagc catctaaaat attatcccct tcataaacat agttcctaag tgataagtta
     3121 atatcgtctt ttgtatagta agctggcgtt tgcatatcac ggatatcgta gcgttgtttt
     3181 gtatcttcta agattgcgcc aagataatga gacgagttaa agtgatagcc aaacttcata
     3241 aaaacagaat tactcttgta atctaaaggg tttggtgcaa tgcgatcttt accggtatat
     3301 tcttgggctg agagctgctc agtgcgataa ggaatctgct caagctgttt gcgctcttca
     3361 ggcgtatatt ccggaaatgt tctcactggg aaattatcgc ggttcaactt aacccttgca
     3421 cgaggagtac aatctaatgt tgggcaagta tcttccacaa taaaaaaaga tcctccagga
     3481 gcattctgtg cggaatttgg gtaaagatcg tagcgatttt caaagccggt tatacgccga
     3541 atattatgtt ttaatttatt tgcctcggaa tgaattttgg tctctttacc gtgtcggtga
     3601 gttgcaataa caagtgcttc aaaaccaccc gcctcaccag ccgctgcgat agactgtaaa
     3661 aaatggctat ttttgctggc ataagaggtc ttactatcta agccccaatg ctgcccctct
     3721 ttaataatat cctgcgcatc tttagtacga aaaccaatag caccacctag cgcaccagag
     3781 ccatattccg cagaacttgc tcctttgctt aactcaattg aacgaatgtt ttcatactca
     3841 atctcattaa ttgcaccacc attagcatct gaacctagcg tatgataatg ctgcgcttgt
     3901 ggtagcccat caacaagtaa gctgacacgg tttttatcta cacctcgaat ggcatagcca
     3961 ctacttgcac cgcgaccttg ttccaccacc gaaataccag ggtcatagcg agttaaatca
     4021 cgaataccaa gaatttgatt tttactcatt tcgtgataat ttttcactac tttccccaag
     4081 ccagttactt cgttttgacg ttcgtgagca taatggctct ctgtcacaat aacttcatcc
     4141 agaacagcta gatcgttatt ttcttctatt tttttatttt cagtcgcagc accgtatgaa
     4201 tgagaaagag caaataacac tgttaaggca acaggtgaat agcgaaaatg atgatatttc
     4261 attatcatta gatagggtct cctttattta aattttgcaa atttttataa aaaattgccc
     4321 gcttgctatc tacaaccagc aaaggggaat tatgattatt tttctatttg acgttttccg
     4381 ccgaatgtaa tactgactct atctttatcc gtttctgcac tatgtacaat accacctaat
     4441 tccgtcgcct tagggccata aaagccccct tcaaattgag tatttatatg cactaccgtg
     4501 ccaccattcg tacttttcgg atcaagatta aaaccagaat tgcccgtttt ggctgtgcct
     4561 gcaaaaccat tccctttcag attgccttca agtgtcagca ttgggcgttc ttcaacacca
     4621 tcattagcaa tcagcttgcc attaattttt ttattgacaa aatctacatc gaatagtgaa
     4681 cgagtaccac tttcgctgtt acttggcgat tcagcccctg ccgagccaga tttactgtac
     4741 attaccccgt cccaagtacc tcgatatttt actgtccctg ttggcaaatc tgccacagct
     4801 gtacgttctc ctactaaata ttggtgagca gtatcactat tatttccctc gctataagtc
     4861 ccaaatttga cataatctaa attattacag cagactgaaa ctcgatacgt tttatcatca
     4921 atagtacggg taaccaaatc atcaaatttc atctcggcaa agcttttttt gccttccgca
     4981 ataagtggaa tctgcttatt gttaataatc aaatgtgtcg cattcccgaa agtatccatc
     5041 tcagatttat ttaaatcttt aagtttaatt ttgaaagcat caaaggcaga ttcactatca
     5101 tcttttttag catctcgttt gccagcaaaa acaacaaata ccgacttatc atcagctaag
     5161 aatttaccgg caagttcttg agccttccca ccaaaaaatc caccttcaag tgtcgtagag
     5221 cttttaccaa aataaggatc atcggtattt tttgcgtttg ctttaccaga aaagcgatta
     5281 cctttaattt ttgcatcaat atcgtaaatt gttgtaattt tttgctcttt gctacgacta
     5341 acatacccat tacgaaccaa tgttccagtt aaagttttat tagcaaaatc agccgtaaat
     5401 tctcctgtat gccccattgg tttttcagaa tcatcaacat taatatcgta actattttcc
     5461 ggtgtggcgc caatattgat gcctgcggaa ttagaaaaat atttactatc tctccctttt
     5521 ctcgcatcgg tagtaaaatc ccaatatcct ttataagtag ctttttgagt aggtattgct
     5581 tttgccggct ctatacctaa atagtaaaca tacccatgtg cacctgttct caaaatttct
     5641 ttaggcttta tttcaggttt tgcaccagaa tgcagaacat agccggaacg aacaaaatta
     5701 aaatctctag tatacaactt atgatttcta tcatgagtat ggctaaatcc atcagcacta
     5761 ctaccgtacg ctttaacctc ttcttcatac ggaatttttg tcagatctcc agtaatctct
     5821 tttatatcac caataggggc tacatcttcc ttcccctgcg gaaagagatt acgacgcgga
     5881 attttggctg aaaaaccaaa ccccggctgc aataaagctt cagtttcaga agcgcttact
     5941 gtacgtcttg cgttactatt atcatcttgt aaacttggct ttttgggggt agtttgcgtt
     6001 tgagattcaa ctttggcaga ttgaacatca aagcttccac catttgagga acaagcagca
     6061 agtagcgccg cattaagcag tacaaaacta cttttaagtt taaacataat gtctcctttt
     6121 aatttataaa atgataatca ttataattta ttatataaac taatgtaaag gtttgaactt
     6181 tattagtttc aggatcatgt taatcatttc aaggtggaaa cgcttgtttt tagattagat
     6241 aaaaaataag gagggtcgaa atagcgggta tacagaaagt gcttatagcc aaaaaatagt
     6301 ctattgttat tgaatacaag cggtctattt tgtcacattt ttgccaaatt tggttaaaaa
     6361 accaaccgct tgtaatctta actgaagata gatagttttt tattttttct acaactctac
     6421 agggctggat ttattgcaga atggtacttg ccactaacta tcatcactcc caggataatt
     6481 tatagaaaca atacgagaaa ttgtgttaat aaatgaaatg aataacgtta atccgataat
     6541 ggtgggaaac cacctaaatc ttttaaacga ttgaccattg cacagaaaag ttctgccgtg
     6601 cgctcggtat catacaacgc agaatgcgct tgcttaccgt caaacgggat ttttgccacc
     6661 tggcaggctt ttaccaacac ggtttgccca tacataaaac cggcaagggt ggcggtgtca
     6721 aacatcgcga aagggtgaaa gggatctcgc ttggcattaa ttcgtttaat cgcagcctgt
     6781 aaaaagccct gatcgaacgc tgcattgtgg gcaacaatca ccgcccgttg gcagccttgc
     6841 tccttcattg ctttgcgaac cattttgaac atttccggaa tcgcaatatt ctccgcaacc
     6901 gctcctctta gagggttgtc aatatcaatg ccgttgaatt ttaatgactc agggttaata
     6961 ttcgcccctt caaatggcgc aatatgaaaa tggcattgtt gatccggcac tagataacct
     7021 tgctcgtcca tttttaaagt aattgccgcc aattccaata aggcatcagt ttgggcattt
     7081 aagcctgctg tttccacatc aatcacaacc ggtaaatagc cacgaaaacg atgctttaat
     7141 aatttataat ctatttgttc cgttgtctgt tccatttatc tatcaaccta aaatacaagc
     7201 ggtctgattt gcaaaatttt ttacaaatcc gaccgcttga atattcatat tcgcaaaaat
     7261 tagtttccta acgctgcttt cgcatcttta ttctcaataa attcgatttt ataaccgtcc
     7321 ggatcttcag caaaggcaat cacagttgtt ccacccaata ccgggcccgg ctcacgggta
     7381 attttaccgc ctgccgcacg cacatcttca atggttttgt aaatatcatc tacgcctaac
     7441 gcaatatggc cataagccgt gcctagctca tatttatcca caccccagtt ataagtcagc
     7501 tcaatcaccg cactttcgct ttcatcggca tagcctaaaa atgctaacga atacttatac
     7561 tgctcgttct cgcttctacg taacagacgc atacctaaca catcggtata aaacttaatt
     7621 gagcgctcta aatctccaac tcgtaacatt gtatgtaaaa ttcgcatatt ttcttccccc
     7681 tgaagttaaa aaacgacccc tattatggca taatcttggc ttaaaatcat tttctttata
     7741 ccttttggga ttatctatgg ctcacgatca cgattcgccg tcaaaacttg aaatttcaac
     7801 ccacgctgca ctgccaatgg tattaatgct gtttattgaa atggctctta acttctactc
     7861 tgcaccgaaa aattcaattt ttatttctcc ttacttattg gcgtttttcg tgacctcatt
     7921 aatcagtttt ttagtgctat ggaaaggcga aatctgccga gggcaagcca gccgtttaag
     7981 ctttatttta ccctttttac ttattttcgc cgtagggaat ttcctttatt ccataggctt
     8041 tacgccaaag cataacccaa tggcggtggc aagcattgct gcagtttttg cctgcttaat
     8101 ctacttccgc ctgccggaag atcaaacctt atataacaca ttgatgtatt gtggtttggc
     8161 tatatcaagt attggtatta tccaatattt agccatttat tggtttgaac tgccttcatt
     8221 gtttaacggg attcgagcca acaatttcgc ccaagtgctg ttaggcattt tattagccgg
     8281 ctggtattta atgttagcga aaagccgttt agatgttttc ctcaaactgt tggtgaaaac
     8341 cgcccttgtg gtgctgattc tcaattattg ctggacagct tttgtgcttt atcaacatct
     8401 acaaattatg ccggatatgc cattgctttc atttatcatc tattttgcag cacaatttgt
     8461 gattttattg atgttggcgt ggttattact tggaaaaaac atcaaaaatc cgaccgcttg
     8521 gacagttgct acgctgttag cgattttata ccctttcgct aatgtagtct gatttatgaa
     8581 acgggcatta aaatttttcg gcattgcaac cgttctatct gttgtggcaa tctactattt
     8641 tttaatgccc agccactatc ttgccacgcc gattaactgg attttgccga aagcgtggaa
     8701 agttcaactc ccacaaggct taaacctgaa ttggcaaggc tcatcacttg ctcaatttca
     8761 actctcttat cgagattgcc cgctactaag tgccgataaa accgatttgg gttggattga
     8821 gaaaaaccat ctttctgtcg ataaattgga tattgattac cgctgccttg ccttgtttcc
     8881 acaaaatgaa cacagcaatt ccgacacttc actcaacgca ttgctggcgg tcattcctga
     8941 tggcgaagcg actatccacg cccttaactg gaaaaatttg cctaccgatt tcaacccaag
     9001 acttcagcgg ctttttgagc aaacagctat taaactctca ctttcaaaag gtgaaattca
     9061 ggcaactgcc gctcaacaag cggtcaaatt tgcagcaaat tttgcaaatg ggcggttgaa
     9121 tgccgattta tcatatcaac cgaatgaaaa agaacagcat aatcttagga tttcagcaga
     9181 aattgaggac aattttaccc aactgccgcc cactatttcc gctgaatatg attggcaatt
     9241 atcttatgaa atcatcgcca ataaagcctt gcaaaagggc gctctattct cagttggcaa
     9301 aaaaatgccg cacaaaagtt agaaggcaac tggcaggttg aacttgccga aagtgaaaat
     9361 aacaaactgg atttcccttt tctgtttgat ggggaaagcc tagaaattca acaagggcgg
     9421 tttgattggc actttaccca acaatttcca ctgcaagggt ttgttagcac caagctcaca
     9481 ccgaaatcat tcaaccaaaa cggctttttg ccactcaaaa cggcgattcg tatcagcctg
     9541 ctttcccaaa acagttgggg taaaggcaat attgtaatct ccaattcaga cggagaaata
     9601 accgaaaaag ggctgaattt accgcttcgt ttgacgggta atatcaaaca cggcaatttt
     9661 attctttaca gtagcgtgcc actggatttt caaggtaatt ttgacgattt aagcgtaaaa
     9721 tttttgccta gctccctact tcgtttgacc ggaaaagagc ggtatttaac cattgaagat
     9781 ttacgttttc cacttgccgg aattaaaatt gacaagcacg gtattcacgg acgactgcac
     9841 gcaattttaa gagggcaaag ccctgatttt aacaatatcg agttccattt agacggacaa
     9901 gcacaaaatt ttaaggctgg agccttagat tttttccaag atcctaaaga tgctaacgca
     9961 gtaaaagaca gttggaaatg gcgaatttgg ggagcatcta tcctcaaagc cttcaacagt
    10021 aaagtgaatt taagcggcag agggcaatgg cataaacagc ttgtgcggtt ggaagaactc
    10081 aaaggcgatt tagccaccgt aaagttagca gatacaacca tttctaaaat cacgcttaac
    10141 aatacgcaag ctattcgatt taatgtcaaa aaattcaccc ttgacggagc ggtaatgttg
    10201 caatcacctg agattgcctt cagttatggc ggtgtgctac ccaaaccacg agtgaatctc
    10261 gcctttgatg gtgaagtcga aaaactacgt tttaaaggag cggtgaatac caccgaactc
    10321 ggcccactca aactgttcgc ccgccgccaa ttaagccaag atgccagcca aattatcggc
    10381 aaactttatt ggccggagca atctgctcaa ggcttccagc cgctttttcc gtttcgtagc
    10441 caatgggtga tcaacaacgg tacaattcgg ggcgaaacgg cgtttagtgc cggcagtaaa
    10501 aacgggctga ttgccggtgg gcatttagcc attcgtaacg gcggtttatc tttacctaat
    10561 ggcgaagcaa aagggattga attttcgctt ccctaccgct accaaaacgg acgctttcat
    10621 ttcggagcca aaaaaccgct tgatgtaaaa attgcccaaa tcaaactggg ggatttagca
    10681 ttagataacg cttcaatgaa actcaacggt tactaccctt ataccaaagc taagccattg
    10741 aatttaaatc aattatcctt tgatttgttt ggcggtaaac tgaatgtaaa acgctttgcc
    10801 ttaccacaaa ccgaactggc ttacctgaat ttagagcgga ttgactttga gcaaattttg
    10861 caatttatgc aatatcagca aattgatctc aaaggcaaag ccaacgctat cttgccgttt
    10921 tggttaagcg gaaaaccttg ctatatttgc gatggcttac tgacacaggc ggaaacttcc
    10981 tatttaacct ttacccctga attgttgtca gaaatgcaga aaagtggtta caccgagcaa
    11041 attttgttac atttagtaga taaaagcacg attaacgatt ttcgcagtct gattaatgtc
    11101 gggccgaaag gcgatttagt attagacgga aaattaaaat tatcttccaa tcaaaataaa
    11161 tcaaaagtga atttaaacta taatcaccga gaaaatctgt ttgatttgtg gcacttaatt
    11221 aactatggct cacaatttga acaaaaatta gaaaattacc tctatcaaaa actggaacga
    11281 tgataaagaa tggaataaat atgaaaccgg ccacatttta ttttgcaata tttttactga
    11341 atttgaccgc ttgtacgccg aaagtacagc ttgaaacgcc aagtgaaggc attacgatta
    11401 atatgaatgt ggtcgttgat caccgcattg atgtgaagat ggacgagaaa tcccgagcgg
    11461 tgatcaccaa aagtgagaac aaaacgaaaa attagctgaa gataatcatt tgatgatctt
    11521 taaattgtgc ataaatatcg gctaattttt cccctgtcgg tagtactaaa tcaggcgtta
    11581 aatcaaacat cggcacaatc acaaattccc gatttttcat ctcgatatgc ggcacgttca
    11641 aacgctcggt ttgaatttgc tgattgccgt acaaaataat atccagatct aaagttctct
    11701 ccccccaacg gcgtacacgc actcttccct gctcattttc aatgctttgc aatttatcca
    11761 gcaatgcagt gggcgatagg tcggtactaa attttgctac cgcattgaca taatcaggct
    11821 gatcttgcgg tccgacaggc tttgagccgt agaacgggct gatttcaaac tcatttgcaa
    11881 atttttttaa tttttcgacc gcttgtttaa gctgctcaag cggattctca aggtttgatc
    11941 ctaaggcgat atagacggtt tgcataaaat atacttacaa atataacaat aaactctctc
    12001 cccttgtggg agagagaccg cttatgagcg ttcagcgaaa taagcagaga gaggggacaa
    12061 gcggtaactt ttattaaatt ttttacacat ttcccctctc cctgattttt cttctgaacg
    12121 aagaaaaatc gctccctctc ccacaagggg agagggaaat atattaatta tccatttact
    12181 ttcggttttt tcttaaaggt tctacggcgg cgtgttttct ttttctcgct aggcacattg
    12241 cctaaatgac gaaccgattt cagcaattca gtacgctgac cttcattgct aaattggtat
    12301 tcgtgccacc aagcggaaag ttcgaccaaa tcgccgcctt caatttctgc acgcatcact
    12361 aataaatcaa accctgcacg gaatttgacg tgttcaaggg tttgttgcgg tcggttgcca
    12421 cttcgtttca tcatctgaaa ttgcaatgcc caaatatctc gaatgactga agtgtgtctg
    12481 cggtgcaacg caatcgcgtt gcaactttcc gccagcacat catttgctgc cagcatcatt
    12541 gcatcgtagc tgttgaagcc accttcgttt ttaagctgct ccattttctc ccggagcgga
    12601 taccaaagta gtgcagcaaa taaaaacgca ggatttaccg gtaatttatc ggcaattcgc
    12661 tcatcagttg aatttaacgc tttggtaatc attctttcgg cataggaatc acctttggca
    12721 gtaaaaaatg ccggcaatac cggaaacaag aattgccata gttcatattc acgcaaaagc
    12781 tgataagttt tcagccctgc accggtttgt aataatttga gtgattcgtc aaacaaacgg
    12841 gctgccggaa tgttggttaa caacaccgcc atatcccgaa ttggggaggc cgtggcttta
    12901 tccaagaaca tatccaactt cgccataaaa cgaacggctc gcaacattct caccggatct
    12961 tcttggtaac gaatagtagg ctctccgata agcgaaagtt tacctgctcg taagtcttca
    13021 ataccgttga agaaatcaaa aataagattg cgttttatat cgtaatataa ggcgtttacg
    13081 gtgaaatcac ggcgctctgc atcttcacgg agcgtgccgt aaacattatc acgcagtagc
    13141 attccttcat cgctgacttt agaaattttg tcattgcgat gagattcgtg tcctgcacgg
    13201 aaagtcgcca cttcaaaaat ttcacgcccg taaacaatgt gtgccaaacg gaaacgacgt
    13261 ccgattaatc ggcattgcct accaaaaata cgctgaattt cttcaggtct cgcattagtc
    13321 gcaatatcga aatctttagg ctttttctcc aagagtagat ctcgaataca gccacccaca
    13381 atataagctt cataaccggc aatctgcaat ttatcgacaa tcgaaatcgc atttttagga
    13441 aaatccttcg ggctaattct atattggctg gcattcaccg caaatttctt gtgtaacaaa
    13501 tgggagggag gattatcttg ttgtttcttc ccacctctat aagtcttttg gtccgttaag
    13561 ttcggggctg ggcgtttaga acgggaagtt ttgggttctc tttccgctct tttttcactc
    13621 tctacctttt catttttctg agccgacttt ttaggcttgg aaaataatga tttaatataa
    13681 ttaaaaataa tacacctcta aatagtaaat gcctcttaaa aaagaggcac cctgtaaagt
    13741 tgattataag cctagctgct tttctcgaat ttcagctaaa gttttacagt caatacataa
    13801 atcagctgtt gggcgtgctt ctaaacgttt aatcccaatt tctacgccac aggtttcgca
    13861 ataaccatat tcatcttctt ggattttata caaggtttgc tcaatttttt tcaataattt
    13921 gcgttcacga tcacggttac gaagctctaa actgaactct tcttcttgac tggctcggtc
    13981 gttcggatcg gcaaagttag tcatatcttc ttgaagctgg cttttggtac gctccgcttc
    14041 ttccataatt tgactgtgcc acgctttcag aattttggtg aaatgctcac gttgagcttc
    14101 attcatatat tcttcgtctt ttttaagctc ataaggctca acgcctgcta atgctaataa
    14161 accgagtgag gttttagccg cttgagtcat agatatttac tccttgttcc ctgtttattg
    14221 gaagttttat tgttaaaatt attgcccgaa tacagactaa cttccttgta accgcactat
    14281 acgaaaaaat caacatcttc gggttttaaa taatggcggc tataaataac acaaaaacga
    14341 ctcattaatc aaatgaattt gcaaaaattt tgcattcaaa ttgatttgat tgcacaaaaa
    14401 aatagccgaa catccattcg gctatttttc aaacactttt taccagctct ttgaccaatc
    14461 ggctaaccat ttttggatag tttcagtagt cggtggcgta aattcaatgg ttttataggt
    14521 tggcattgcc gcaaaagccg gatcaacgcc gtcggttaaa accggattca ttacgttgtg
    14581 gtaagaaata atatgttgcg attccggttt gtgcaaaaat tcaagaaatt gatttgccaa
    14641 tgctttttgt tggctgcttt tgacaatagc cgcattttct acttgcacca aatgcccttc
    14701 ctcaaacgga gcagccacat atttatcggt gttttcgtgc cacttatgat ataaaggcga
    14761 tgtagtatag cttagtacca aatccgactc gccttttaag aacgctccat aagtttcaga
    14821 ccaacctttg cctaccgtta ccgtatgttt tgccaatgtt ttccaagcag ttggagcttc
    14881 atcgccatac acttgattta cccacattaa gaagccccgc ccaacgctgc tggtacgtgg
    14941 gtcttggtaa atcactttta aatcttggcg ttccaccaac tcttttaaac tttttggtgg
    15001 atttttcagc ttctctttat cgtaaataaa agcataagaa cccgtgtcat aagggaagaa
    15061 aattttctgt tgggtttcta atttggtctt tgcttcaaac tcggcaaaca agccactttt
    15121 ttcggcttca ggttgcagga aattatcaat accgaccacc acatcagctt tggtttttgc
    15181 tccctccaaa cgcaagcggt tgaacatcgt tacgctatcg tcaagcggaa caaatttgac
    15241 atcacagcca cactctttct caaaattctg ctctaattta ggagcaggtc catattccga
    15301 agcaaacgag ctgtaagtgt aaacggttaa ggtcggttga ttggcataaa cacttgcact
    15361 taataacgca agtgaagaga ggataaattt cataacaatt ccttctaaat taaatgaata
    15421 gaaggattta agaaaggcaa gttgctatct caaatcccta cgctgatatt aatcagatca
    15481 ggttctatgg gtatttctca gccacaagcg gttaaatttc ggcaaaaatt tgcaaatttt
    15541 tacgcaaaaa caaccgcttg ttgcacccca atgagaacgg cttcattgta aaaagtttgc
    15601 aggcagattt caaccaaagc aaacgtttgc tatttgtatt aaaaatccgt atactaccgc
    15661 cctagtccaa acaaggaact agaaatgaat tgcacaacat cggttaaatc aaattcccaa
    15721 cagctacgct tcaactttag aggcgtagct gtttttctat tcatttcaaa ccattcaaaa
    15781 tcgctgttat agcgattttt tttcgcacgc ttgcaattac cgcaagcggt tgagccacat
    15841 taacagagag aaaaggaata aaaatgagcc aattgattcg taccctaaaa ggacatattc
    15901 gtgatgaaat catcaaaaaa ggcggttggg taaatgcaca cgcccacgca gatcgtgcat
    15961 ttacgatgac gcctgaaaaa atcaccgttt accaaaatgc gaatctacag caaaaatggg
    16021 atttggtcga tgaggtaaaa cgtaattcaa gcgtagaaga ttactaccgc cgcttttccc
    16081 aagcgattga attgatgatt tcacaagggg taacggcatt tggtactttt gtggatatcg
    16141 accaagtatg tgaagacaga gccattattg ccgctcacaa agcccgtgaa gtatataaaa
    16201 acgacatcat cttgaaattt gctaaccaaa cgttgaaagg cgtgattgaa cccaatgcga
    16261 aaaagtggtt cgatatcggc tcggaaatgg tggatatgat tggtggcttg ccttaccgtg
    16321 acgaactgga ttacggcaaa ggcttggaag caatggatat tttaatggat aaagccaaat
    16381 cgctcggcaa aatgctccac gtccacgttg atcaatttaa ctcacctaaa gaaaaagaga
    16441 ccgaacaact gtgtgataaa tcgattgagc atggtatgca agggcgagtg gttgccattc
    16501 acgggatttc catcggctcg cacccgaaag aatatcgaaa aatgctttac caaaaaatgc
    16561 gtgatagcca aatgatggtc attgcctgtc cgatggcgtg gattgatagc ggacgtaagg
    16621 aagatttaca accgttccat aacgctttaa cccctgctga tgaactcatt cctgaaggca
    16681 ttactgttgc tatcggcaca gataatatct gtgattatat ggtaccgctt tgcgagggcg
    16741 atatgtggca agaactcagc cttttatcag caggctgtcg ttttactaac ctagaagaaa
    16801 tggcaaatat tgccagtatc aatggtcgaa aagtactggg tttagtctaa ctgaataaac
    16861 gaaaggcgaa ccctaggttc gcctttaata acagcataac cgattattta aacaagttac
    16921 ccaaaatccc ttttgccgct tgagctaata agtcatttgc atcaaagttt tttaagtctt
    16981 caacattacc attcggggtt aaagtatcca cgatttttgg caagaactgg gctaataaat
    17041 cgctcgcatc agcagcatca acacccgctt cttgagccac attttgaatg ttttcttgcc
    17101 cgaacacatt actgatttgt tcgcccgaaa caggtgcatt gtcttcatcg ctgctgatcc
    17161 aagtgcgtaa cacatcatct aatccgcctt gttggaattt ggcaatcagc ccttcaatcc
    17221 caccttgtga ggcgagtaaa ttttgaatta attgagttgc agttgattgg ttattgccac
    17281 tcaatactga agaagccaat gaacctaaaa tatttcctaa cataatttct cctatgcaag
    17341 cggtacaatt ttgcgaaaat tttgcaaaaa aacagcaaac ttcgaccgct tgtaatcact
    17401 ttaacgagct aaaatggctc gcactctttc caaatcttcc ggcgtatcca cccccacttg
    17461 cggggcttct ttcgccggtt cgatatgaat tttttcaccg tgccataagg ctcttagttg
    17521 ctcaagggac tcaagctgtt ctaattgtgt cggctgccac gccacatatt gtttcacaaa
    17581 accggctcgg taagcgtaaa tgccgatatg gcgtaaataa ccttgagcgg caacaaaact
    17641 gtcatcacaa tccggaaaac tgtctctggc aaacggaatg ctggctcggg aaaaataaag
    17701 tgccattccg tttttgtctg ccaccacttt caccgcattt gggttaaata gctcttctcg
    17761 ggtcgctaat ttcacaccga gtgttgccat attgacttga taagcatcta aattttgagc
    17821 tacctgagta acaattaccg gtggaatcag cggttcatca ccctgaatat tcacaataat
    17881 ttcgctgtcg gcaatctgca ttttttcgat cacttccgcc aaacgctcag tgccggaatt
    17941 gtgtttttcc gaagtcatac agacttccgc cccaaaagat tgagcgaggg cttcaatttc
    18001 agggtgatcg gtggcaataa tcacacggct tgcaccggca agctgagctt tttcccaaac
    18061 gtgttgaatc atcggtttgc ctgcaatatc caacaacggc ttacgaggca aacggctgga
    18121 agcgtaacga gcaggaataa ttacagtgaa tttcataggc tatccttatg cttcttgagc
    18181 atctaagaaa cgttctgcat ccagggctgc catacaacct gtgccggcag aggtaatcgc
    18241 ttggcgatag ttatgatcca tcacatcacc ggcagcaaat acgccttcca cagaagtggc
    18301 agtagcattg ccttccaaac ctgatttcac tttaatgtag ccgttttcaa gttctaattg
    18361 accttcaaac attgccgtat tcggtgcgtg cccaatcgcc acaaagaaac catcaacctt
    18421 aatttcttcg ctcaattctt ctttggttga ttttaaacgt aagccggtaa cgcccatatt
    18481 atcgcctaac acctcatcaa ccgtacggtc tgtgtgcaga ataattttgc cttcttcaat
    18541 acgtttttgc agacgaccaa gcaagatttt ttcagcacgg aagctatcac ggcggtgaat
    18601 taaatgcact tcacttgcca aatttgccaa ataaagtgct tcttccacag cagtattccc
    18661 accaccgact accgcaaccg gtttattgcg atagaagaaa ccatcacaag ttgcacaagc
    18721 cgacacgcct ttgcctttga aatgctcttc agaaggcaaa cctaaatatt tcgccgacgc
    18781 accggtggca ataattaacg catcacaggt gaaagtgtat aaatctccgt ttagcgtgaa
    18841 tgggcgttta gataaatcca ctgaatgaat atgatcaaac acgatttcag tttcaaattt
    18901 ttcagcgtgc ttgagcattt tgttcattaa ctctgtgccg gtaatttgtt caaattcccc
    18961 cggccagttc tcgatttcat cggttgtagt gagctgtccg ccttgttgca taccggtgac
    19021 taaaaccggg tttagattgg cacgggcggc ataaacagca gcggtataac cggcaggccc
    19081 tgagcctaaa attaaaagtt tggtgtgttt agtggtcata atgaatcctc tgaataaata
    19141 ttaatgttta ttttagccta aatttcagtt caactctatt ttcgttttcg ctcaactttt
    19201 ttcaattttg tgacaaagtt aacagaaatc cgactgtgtt tcttgtaaat tgtgacagtc
    19261 taattcattt aaaaggggca aaaagatgaa aaaattaatt aattcaatag aaaccgtctt
    19321 agatgagcaa ctttctggtt ttgtgaaagc acattctgat ttaacactta acacagaacc
    19381 tgtctatatt taccgcacaa cgccaagtaa tcaacctaaa gtagccctta tttccggtgg
    19441 tgggagtggg cacgagccaa tgcacgccgg ttttatcggt aaaggaatgt tagacggagc
    19501 ttgccccgga gcaatcttta catctccaac gccggatcaa atgtttgaat gcggtttagc
    19561 ggttgatcgt ggcgagggtg tattgctaat tattaaaaac tataccggtg atgtgctgaa
    19621 ttttgaaaca gccaccgagc tacttgcaga tagcggtgta aaagtcgcaa ccgtgttggt
    19681 tgatgatgat gtggcagtca aagacagttt atatactgcc ggccgccgcg gtgttgcaaa
    19741 tacagtatta attgaaaagc tgttaggagc tgcagcggat aaaggctata acttatccga
    19801 attagccaaa ttagggcatc agttaaacaa taacgggcat tctatcggaa ttgccttatc
    19861 tgcttgtact gtgccggctg ccggtaagcc atcatttact ttagctgaaa atgagatgga
    19921 atttggggta ggtattcacg gagaaccggg cattgaacgt cgcccctttg aaaatctgga
    19981 tagtaccgtg aaacaaatgt ttgagacctt aattgctcac ggcgattatc aacgtaaaat
    20041 tcgccattgg aatacacaaa cccaacaatg ggacgaaatc gaagaaagca aagtggcatt
    20101 gaaaaaaggt gatcgtgtta ttgctttagt taataactta ggagcagtgc cactatccga
    20161 actttatgct gtttatgatg cgttagaaaa agagtgccaa actttcggct taagcattga
    20221 acgcagtctt gttggatcat attgcacctc gctggacatg caaggtatct ctatcacatt
    20281 actgaaagtt gatgaggata ttctcaaact atgggatgct ccggtaaata caccggcaat
    20341 gcgttggggt gaataattag attgaaagga taagttatga caatatcaaa acaacagatc
    20401 ttaaaatggc ttgaaaattg ccaacaggta atgactgaaa aacgggatta tttaaccgaa
    20461 ttggataccg ttattggcga tggcgatcac ggtttaaata tgcagcgtgg atttagtaaa
    20521 gcacttgaaa aagcccatac cgtgcaagat aaagatatcg gcaccctgct taaaaccgtt
    20581 ggaatgacat tattatcgca agtaggggga gcgagcggcc ctctctatgg ttcatttttt
    20641 attaaagcgg ctcaaggtgc tacaggcaaa gagcaactga gctttaacga gttactggca
    20701 cttctacagc aaggagcaga agctatcgta caacgtggac acgcacaagt tggcgataaa
    20761 acgatgtgtg atttatggct gccattactc gaagacttag ctcaagccga tagcactcaa
    20821 ccaattgctc aaatcttatt acaagcggtc gaaaaagcag aaaattttgc aaatcaaacc
    20881 gctccattaa tggcgaaaaa agggcgtgcc agttacttgg gcgaacgcag tatcgggcat
    20941 aaagatccgg gagcaacgtc cagctactat atttttaaag ccttagctga agcattacag
    21001 taggaggggt aaatggttaa tttagtgatt gtttcacata gtgctaaact ggcggaaggc
    21061 gtgggggaaa ttttggctca aatggcacag gggggctgta aaatcgccct tgccggcggc
    21121 attgaggata cctcaaatcc tatcggcact gatgcggtaa aaataatgca agcgattgaa
    21181 tcggtattta gcccagacgg tgtgattgtg tttgtcgatt taggcagtgc aattttaagt
    21241 acccaaaccg ccatagattt actggagccg gaacttgccg aaaaagtgat cattagctac
    21301 gctcctttag ttgaaggtgc ttttgctgct gtagttgcag cctctgccgg cgatagttta
    21361 gaagcggtat taaatgaagc gaacgaagcc gctgctctta agcaggaaca agccaattag
    21421 taaaaatgcc gtatcgaaaa atacggcatt ttagttttat tagtacaata gtgaataaag
    21481 ctgtcttcta aatttcggca caatcgggtc tgtacccagt gcagataaga ttgccagaaa
    21541 ttggcttttt acctcgccgt tcgctacatt taaatccgat tttaaccaat caaaaagtaa
    21601 cgtgagtgct tcttcatttt tatgagcttg gtgtagctga tttgccaatt taatcgcaat
    21661 ttcaggggtt ttgctgttcg cataatccgc ttgaagctgt tgtaattcgg gcgattcgct
    21721 ggcttgttcc aataattcga tttgggcttg caaaccgtgc caacggctgt ctctgtcttg
    21781 aatcgggatc gctttaagga tttcacgagc ctcttccacg cttttcattg caatgtaagt
    21841 ttcggcatag agcaaagcga aatcgctgtt tttcttatcg gtcatttccc acgctgattt
    21901 cagcagcggc aaggcttcgg tataacgctg atcttgcaat aattccaagg cttgttgaaa
    21961 tttcagctct tcctctttcg gtaaaatatt tgccaaccga atccgtaatt cctgctcact
    22021 tactgcacct tgaattgcat caatcggctg accgccggca aacaaataga gcgttggaat
    22081 ttgttgaatg cgaaattgag cagccaatgc ttgttgctca tcacaattta ccgtcgccaa
    22141 taaaaattgg ttagggtttt catccgaaat acgacgtagt aaggcatcca tttccaatga
    22201 agccacttcc cttggcgaaa taaaatgaaa caccgtcggc acttgtgccg ctgctgccca
    22261 tacttcacta aaattctgct cgtttacatt tacaaagtag tccatacaaa accttcttaa
    22321 gctaaaaatt actttttata ttgtagcatt aataagaagt ttcaataggt agcccgtttc
    22381 tctcccacgc ttcaaaacca ccttttacac tataaacatt ctcaaaccct tgttcgatta
    22441 aaaactgtgc tgtactttgg ctactcactc cgtgatagca aatcacaacc accggttcgt
    22501 cataatcgac ctcgtctaaa aacttaccat aactctggtt ggttaaatga aacgcatcct
    22561 gtgggtggct gtaaacataa cggcgggcat cacgcacatc ggcaagcacc gcaccttcgt
    22621 tttcgattaa ttcccaagcc tgttgcgggc taatttcttt aaatgtagtt tccataatca
    22681 ctttccctca aaaaacgtgc aactatacca taaaattcta aaaagaatgg ctattattcc
    22741 aagttgaaaa tttgatgttt gtcagatata attgcaaact attttcaaat gcactgattt
    22801 aaaactacca cagtttgagg attttatgga gcaattattt caatttttag aacatcatac
    22861 tgactttgtt atattaggat tactaggctt attaagcgta atctgccttt ggaaagctat
    22921 tgaacgtatt atgttttatt ccaaagtaga tatttcaaaa tacgataccc tcgaagaatt
    22981 agacatcgat ttaacccaca atttaactac catttcgact atcggctcta atgcccctta
    23041 tatcggctta ttaggaaccg ttgtcggtat tcttttaact ttctatcatt taggtcaatc
    23101 aggtggtgat attgatgcgg cctctattat ggtaaacctt tctttagctc taaaagccac
    23161 tgctgtcggt atcttagtgg caattattgc aatggttttc tacaatggtt ttggtcgtaa
    23221 agtggaagaa aacaaactga aatggttggc attacaatca aaaaagcctc atcaagcggt
    23281 gtgatttagt ccattttttg caaattaata aggcagaaca atgaaaaaat tcgatgaaat
    23341 caacatcatt ccatttattg atattatgtt ggtattactg gctatcgtgt tagttaccgc
    23401 ctctttcatt tctcagggta aaatccaagt aaatgtaccg aaagcaagta caacacagcc
    23461 aatgaaagca gacgatttag cgaagctttt aaccattacc gaaaataatg agtttttctt
    23521 taatgatcaa gcaataacta aagagcaatt aattgctgaa gttgccactt gggataaaag
    23581 ccaaaaagtg tcactcaaag ttgatggtgc agtcgccttc gaaaaatttg tggaattaac
    23641 cgatatcctt tctgcaaatg aaattaaaaa tgtagcaatc attactaaaa aagaaactgc
    23701 tccagcacct tcaagcacac ctggtagccc tgcacaagtg ccagcagtcg caccttaaat
    23761 agggtaaaca ggtatgaaaa aaaaacattc tcgtatcggc ttattggcat ctttggctat
    23821 tcacactgcc ttaattggtg gcacttttgc ttggttacat aaccacaaag tggaaaaaat
    23881 tgccgagcaa aactctcttt ctatggaaat ggtggcagca ttattagagc aacctcaggt
    23941 tgccgttgct ccggatccta ttaccgaaga ggtcaaagaa atcgaaccgg agaaggcaga
    24001 agtaccacct gaacctaagc ttactccgga gccaactcca gagccggagg caattccaga
    24061 tcctacgcta aatccgaaaa aggaaaaacc gaaagaagaa aagcgtaaag agcgacacca
    24121 ccataaacat aagcatcgtc acaaagagaa aagggaagag ctacaagagc aagaaaaacc
    24181 gaaagataag cctaaagagc gcccgaaaca tcatcacaag catattaaag cattagagcg
    24241 cgggccagag ataaaacaag gtattgtcgc taaagcgatt ccaaatgcgg ctgaaggtga
    24301 aaaagtggtt gcgggggttg ttggagggca aaaaaacggt tcaccaaatt caacctcaac
    24361 tacaggttca gcaaatactg gggctagcag tggtaatgcc agtgaacttg ctgcttataa
    24421 agtcgcatta cagcgagcat tacagcgtaa ggcgaataac tcttaccctc agcgtgaaaa
    24481 aatgatgcgg aaaaccggta cagttacgat taaatttacc attacatcgt ccggttcaat
    24541 tacaaatgta tccgtactca attcatcggg aaatagtaat ttagataacg ctgcggtacg
    24601 cagtgcagaa ggtttgagta tgcctccgcc accggcaggc ttccctccta cggtaacagt
    24661 accggtaaga tttgcccttg aataaaaaca gccctcaaaa gcaatgtact tttgagggct
    24721 ttttattgca aaaaattgac taaaaatgac cgcttactgc ttgcgaatat cgccatttct
    24781 cacattcgga ctcacttcac ccgtacgagt ttctgtgctt aacgaggtag aatttacttt
    24841 cgtaaaagta taatccgctt tgctgaattc acctgtttga ttatttaaga agaaattgcg
    24901 gtactctttt acccataatg ccgttgcgcc acaaactgcc acaggcataa ctactaaatt
    24961 cacaaatgga atcatcgtga ataggctcac taaagcacca aaggtaaaat ttaaagtgcg
    25021 agactgcgac aacgcatttc gcatacgctg aaaactgatt ttatggttat caaacggata
    25081 gtcacaatat tgaatggcga tcaaccaagc accgaagata aaagtcagca caggtgctac
    25141 ggtttgccca accacaggca aaaagcctaa tacaaaaaga gcaatcagcc ttggaatgct
    25201 atacatcatt ttttgccatt ctcgtttcag cattcgaggc acatctttta acattgcacc
    25261 gaatgacata tcgcccaaag gctcgccggt aagttgcagt tcgacttttt ctgctaataa
    25321 cgcattaaag ggagcagcaa caaagttagc caaggtagta aaagcaaaat aaaatcccac
    25381 taatatcatc aaaaaaatca gtggaatcag tacaaagcta agccattcca gccagcttgg
    25441 cagtaacata tccaacaagc caccgatatt ggcaaaaaat ccccaaatca gccctaccat
    25501 cagcacggta ttaataagaa ttgggaaaat cacaaaaggc aaaaattgac gttgtaacaa
    25561 taaccgccag ccatatataa aataatgaaa gcctaatccg acttgatttt gcggctcaga
    25621 aaaaactgaa gacataatga ttccttattt tctatcaaaa ttaattagaa atatggtaag
    25681 ctacgcacat tattttcgca aatatgaaaa tacatttttt attgattatt tgataaagag
    25741 gacacaatgg aactgcatat tatttttttt attcttgccg ggctactgat tgctgtacta
    25801 attggattta gcctttggtc cgctcgtcgt gaaaaatcaa atattttttc aaatacattc
    25861 tcgaccagac ctattgctgt gccaccacag aataataaaa tgagcaatag catcccaacc
    25921 tcattacagc cacaaaatga ggattatcaa gcaatgtctg tgccggaaga aaatccgcaa
    25981 cagatacaac aggaagttga aagctcgctg caaaatatca aaatcagttt gccgggcgga
    26041 aatcctcagc aacagcctga gcaaattcag ccgatacaat cggtagcaga accaacggtt
    26101 agcacttacg gtcagaaaat ttctaatcag caacatatcc aatacaatac gccggatttt
    26161 gcaaacccaa tggtgaacac agtggtggaa gaaacacctc aagcagtagc tatcgaacct
    26221 caagaaaccc aatcggcaga ggaagaaaat ccatttgtaa ccctctatct ttacgcacca
    26281 caaaatgaag ctttccgcgg tgattttgta gtacattatt tagaagaagt tggcttacgt
    26341 tttggcgaac accaaatttt ccaccgccat caacatattg atgattcatt aagtccgatt
    26401 attttcagtg cagcaaattt aatgaaccca ggaacctttg atttaaataa tatctcaaac
    26461 tttgcgacag ctggtttagt gctatttatg caacttccaa ccgaaggcaa tgatgtggct
    26521 aatatgaagt tgttaatcag taacgctgaa cacttagcag catcgttagg gggattctta
    26581 tatgacgata atcaacagcc ttttggcgaa gaatcccgcc aacgttatat gcaacgtgtg
    26641 atgcactaat tgcgaaaaaa ttaataaatc cgaccgcttg tacaagcggt cttttttgta
    26701 gagaatttta ccaatgtctt tatttaacca aacctcttta tttgaagaga atgccacgcc
    26761 cgagttagtc gagaaaatcg aaactattcg ccaaacattg cgtcaatacg agtatgaata
    26821 tcacgtttta gataacccaa gcgtacccga tgccgaatac gaccgtttaa tgaacgagct
    26881 gaaaaatctg gaatggcagc acccggaact gattagtgcc gactcgccga ctcaacgggt
    26941 tggtgccaaa ccgctggcag gctttgctca agtcacccac gaaatcccta tgctttcgtt
    27001 ggataatgcc ttctccgatg aagacttaga tggcttttta cgccgtatgg aaagctatat
    27061 caccgcctct ccttcgcaac tggaattttg ttgcgaacct aaattagacg gcttggcagt
    27121 gagtatttta tacgaaaacg gtatacttac ccgagctgca acccgtggcg atggcacaac
    27181 cggcgaagaa attaccgcta atatccgcac cattcgcaat attccgttaa agctcaacac
    27241 gactaatcca cctgctcgat tagaggtgcg aggcgaagtc tttatgccac aatcaggctt
    27301 taatgagctg aatgagaaag ccttagctaa aggcgaaaaa acctttgcca accctcgcaa
    27361 tgccgcagca ggttcgcttc gccagttaga tccgaaaatc acccgccagc gtccgttagt
    27421 gctgaatgcc tacggaattg gggtgtatga aagcgatgac gaactgccag ccacccattt
    27481 cgaacgtttg caatggctga aatcgcttgg tattcctgta aataatgaaa tccgcttggt
    27541 tcaaggcaaa gctgctctct tggcttatta tgcggagatt caggctaaac gcccaacatt
    27601 aggctatgat attgatggca cagtattgaa agtaaatgac attgccctac aagagcaact
    27661 cgggtttatc tctcgctcct ctcgttgggc gattgcgtat aaatttccgg ctcaagaaga
    27721 aatgacaatc ctcaaagaag tggacttcca agtgggaaga acaggggcaa tcacccctgt
    27781 ggcgaaatta gagcctgttt ttgtcgctgg cgtaacggta agtaacgcaa cgctacacaa
    27841 cggtgatgaa atcgagcgac ttggtattgt gattggcgat acggtaatta ttcgccgagc
    27901 gggcgatgta attccgcaaa ttacaggcgt gatgttagaa cgccgcccgg aaaatgcaaa
    27961 aaaaattgaa tttccgaccg cttgtcctat ctgtcactcc gctgttactc gggtagaagg
    28021 cgaggcagta gcacgctgta ccggtggttt attctgcgaa gctcaacgta aagaagcctt
    28081 gaaacatttc gtttcacgca aggcaatgga tattgacggc gtaggcgaaa aactaatcga
    28141 gcagttaatg gctcgagagc tgattgaaac gcctgccgat ctgtttaagc tcgatcacac
    28201 taccctaatg cgattagagc gaatggggga aaaatcggct caaaatgctc tcaacagcat
    28261 cgaaaaagca aaaaacacta ctcttcctcg ctttttattc tcgttaggta ttcgtgaagt
    28321 gggcgaggca accgctctca acttagccaa ccattttggt agcttagagg cgatccgcca
    28381 agccactttt gagcaattaa aagaagtgca agatgtgggc gaggttgttg ccaaccgtat
    28441 tgtcagcttc tggcaagaac cgcataatgt ggaagtggtg gaagatttga tcgctcaagg
    28501 tgtacgttgg gaaaacgttg tgaaagccga aattgtagat aacccgttaa aagataaaaa
    28561 cgtggtctta accggcacgc taacccagct cacccgtgat gaagccaaag ccctattaca
    28621 aagtttgggc tgtaaagtct ccggctcggt ttccagcaaa accgattact taatcgccgg
    28681 cgaaaaagcc ggttccaagc tggcaaaagc tcaagagttg ggaattcaga ttttaagcga
    28741 gcaacaattt attgagctta ctcaacatta acaaacaaag gggcagatga ttgaaatctg
    28801 ccccttattc tatctattga atgcttaaaa gcattaacca atcaatttaa actgctgagc
    28861 taaaaacagt aacgtaaagc tagttaagta aattaagccg ataactgcca accaaaataa
    28921 ccagcctttt gcacgatgct caccttttag cactaaagag aaatttaacc acgcaaaaac
    28981 aggggtagaa acaaatgatg aaatcattgc aaattgtaac attttcgcca catcactcat
    29041 aaattggcta ataattaaaa tgccgatgag tgcagttacc gtcatccaaa tacttaattc
    29101 tgtttgtgaa tgttgcttac gcccgctaat taaacgcaac gcttctgcat tcgctcgtga
    29161 atatccatca ataacagtga tcgttgtgcc gaacatacac ataaatgcaa taaatgcgat
    29221 taaaagctta gaccagtcac caatcgcaaa agcatacatt ttgattaatt gagcaatata
    29281 ggcaacaccg gcttgttcta ctttctcacc tgaaccgtac tgaactaacg cacctaatgc
    29341 taaaaaaaca atcgccaaaa ttgccgtgcc gatataaccc acattaaaat caaaaatacc
    29401 gtcctcataa ttcactttac ttaaacgttt tttcgcaata acccacattg agttaatggc
    29461 agaaatttca attggtgcag gcatccagcc cattaatgca acgatgaaca caagtgctgc
    29521 taaattccac ggcgaaggct ctacgaaatc tggagcaatt tcaacgccac cttttaaagc
    29581 agcaatgatc acggcagata ccgtagagat ggttaaagca atcataatcc atttagataa
    29641 tgtatctaag aatttatatt gccctagaag taaaataccc caagtgacca caatcacaat
    29701 agttcctgcc attggaatgc ttaaatctaa cggaatacct aaagcagaaa aaataaattt
    29761 tagaatcgct gctgaaacaa tcgccaccgc agctgtgtta atcattgcag caaaaacgtt
    29821 aaggataaag aaaataataa gataaaactt tcctttttct ttgtagcctt ccaataaagt
    29881 tttaccgcta gctaaggtat attgcacacc aaagcggaaa aacggatatt taaataaatt
    29941 ggctaacaga ataataatcg ccagctgcca gccataaatc gcaccagatt gtgtagaggc
    30001 aataatatgc gaaccaccca ctgccgcaga tgccatcaaa atccccggcc ccattgcagc
    30061 aaatttactt tgccaagttg aatgttctat ttgttgtgtc atatagcttt ccttatcaca
    30121 ttactatcaa aacaagatgg tttcattcta cttataaaaa ccaaataaaa acac
//
LOCUS       DANLZQ010000018        29555 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.018, whole genome shotgun sequence.
ACCESSION   DANLZQ010000018 DANLZQ010000000
VERSION     DANLZQ010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 29555)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29555)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29555
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.018"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..192
                     /locus_tag="PXE50_000753"
     CDS             <1..192
                     /locus_tag="PXE50_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CMP-N-acetylneuraminate-beta-galactosamide-
                     alpha-2, 3-sialyltransferase"
                     /protein_id="HDL5621686.1"
                     /translation="IFQEFSHKKCRVYTYFSSAVINILNKSNHIEVVALRVNVDNPAY
                     IESYELLEKLGVQIVDIRE"
     gene            194..979
                     /locus_tag="PXE50_000754"
     CDS             194..979
                     /locus_tag="PXE50_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HDL5621687.1"
                     /translation="MKKYLISLEKDVKRRELFFSQPNTEDFEVFSAINTMSSDWEALN
                     NHFDLALFEQRYGRKTTKGEVGCTLSHLAVYQKIAEDSTIAEDDYCLVCEDDALFADD
                     FQKHLDALLAQNLKVDIILVGQSKIPTFNDSELELNYPSTFGFLQKNIPNSQYKYAYS
                     YLNYFAGTVAYLIKKSTACQFLAQCAGKNPYWLADDFILFEKNFKFDVLIVRPLMAIE
                     NPVLISNLEDLRGSLNNNLFKKAVKYPLKKLLAIKRNFTQRNS"
     gene            990..2177
                     /locus_tag="PXE50_000755"
     CDS             990..2177
                     /locus_tag="PXE50_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621688.1"
                     /translation="MSALINLFYLYDPWFFHFLRMSFVVGLVACGYLVFQIIKGKSNG
                     IIIPKDSLIAIIALIGFSIIPLLINSTKEIGVLAMYVKMLILFVFGIAIYNVFYHNQQ
                     GKTLFVRDLKIGIAIQWICGVTALLGLPFMVDFLLSSNAMMPRFFGSEQEYRLYNITS
                     SAFFQLSIFYLMLLHFLLAYNKKTDVVNEWFLFLLLCVGLISGRTFLLMSVISIALYF
                     KWKYILPLIAFTALILFLAIVFPENRYVEHALEPVINLLSGTGKVSSSTDNLVKNHLF
                     LPTLNQFISGDGLYYTETGGYYGGSDSGYIRQVLYGGVSYMLACFAFTYYFVRKVAVN
                     WFEGSWIFTLSTIGILAILNIKADTFAFPGLMMLFLMFLSLFGTSGRNVTFFCKNKEA
                     EYV"
     gene            2170..3135
                     /locus_tag="PXE50_000756"
     CDS             2170..3135
                     /locus_tag="PXE50_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005578999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDL5621689.1"
                     /translation="MFSIIVPSYNRNQEINALLESLKQQTAYNFEVIIVDDCSKIPVS
                     ETLGILNEFNDISTKEKVRELLTRDSLSHIYSYPFDVKVVRNNPNVGAAQSRNVGATN
                     ATQEWLLFLDDDDRFMPEKCERLAAEIANNPTANFVYHPAKCEMVNEGFTYVTKPFKH
                     KSELTKENILKANKIGGMPMIGLKKSLFCKIGGLSDRLRSLEDYDFLLKLLEEPSFEP
                     LYVDEALTYCTFHTKRSSVSTDTTNTEKAIEYIQQTYIKTPEANNFKLNSLYILSYPH
                     VMNLSRKAAGYYFEMFKQTKNIKQLIIALVIFISPKLAINLKRFM"
     gene            3135..3935
                     /locus_tag="PXE50_000757"
     CDS             3135..3935
                     /locus_tag="PXE50_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_162680708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDL5621690.1"
                     /translation="MKFSVLMSLYIKEQPQYLRECFESLKVQTVQADEIVVCFDGAVT
                     PELEAIVEEYSAILPINAVKFPQNRGLGKTLNDGLTYCKNEWVFRMDTDDICMPERFE
                     KQVAFIEQNPETVIFGGQIAEFGQDIHDLVAYRNVPTTVEEIVRFTRLRCPFNHMTVA
                     YQKSKVLEVGGYQDLQEDYYLWIKLIAQFKQVANLPDLLVYARVGNGMVGRRRGMAQA
                     EAEWRLYKLKNRCQIHDPISGFGIFIMRAIPRLLPVSALKKVYGLLRK"
     gene            complement(3972..4478)
                     /gene="msrA"
                     /locus_tag="PXE50_000758"
     CDS             complement(3972..4478)
                     /gene="msrA"
                     /locus_tag="PXE50_000758"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HDL5621691.1"
                     /translation="MQNIREIYLAGGCFWGVESFMQRIKGVIKAQSGYANGNTDNPSY
                     QEVCAGSGHAEVVKVTYDANQISLAKLLDYFFKVIDPVSINKQGGDIGIQYRTGIYYT
                     DPQDEPVVTAALAQLQTQFDQPLAVENQMLEQYFPAEEYHQEYLVKNPNGYCHIDIQL
                     MNEILKNQ"
     gene            4659..5921
                     /locus_tag="PXE50_000759"
     CDS             4659..5921
                     /locus_tag="PXE50_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HDL5621692.1"
                     /translation="MGTLNSFLGIIVLLFIAFLFSSNKRAINVRTVLGALALQVAIGA
                     LVLYVPAGRDALNAMATGVSKVISYGNEGISFLFGGLVSDKMFEVFGGGGFVFAFRVL
                     PVIIFFSALISLLYYIGVMQWVIRILGGLLQKALGTSKAESMSAAANIFVGQTEAPLV
                     VKPYISKMTESELFAIMAGGLASIAGSVMAGYAGMGVPLTYLIAASFMAAPAGLLFAK
                     IMVPQTEKFRDELEAVDLEKPANILDAAASGASSGMQLALNVGAMLIAFVALIALVNG
                     ILGGIGGWFGYDTLNLGQIFGWVFKPLAWVIGVPWEEAEIAGQMIGLKLAVNEFVGYL
                     EFAKYLAPESTVHLTDKTVAIITFALCGFANFSSIAILIGGIGAMAPSRRGDIARLGI
                     KAVIAGSLANLMSATIAGLFIGLGGAVL"
     gene            6066..6842
                     /gene="deoC"
                     /locus_tag="PXE50_000760"
     CDS             6066..6842
                     /gene="deoC"
                     /locus_tag="PXE50_000760"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HDL5621693.1"
                     /translation="MNLKKSAEIALSLMDLTTLNDNDTDEKVIALCQQANTKFGTPAA
                     ICIYPRFIPIARKALKQQGIEQVKIATVTNFPHGNDDIEIAVAETKAAVAYGADEVDV
                     VFPYKALIAGNEQIGFDLVKQCKAVCAANNVLLKVIIETGELKSAELIRKASEISIQA
                     GADFIKTSTGKVAVNATLESARIMLETIRDLGVADRVGFKAAGGVKTSEEAAQYLALA
                     ESILGNDWVSASHFRFGASSLLANLLATLNDEQQQAVQGY"
     gene            6863..7582
                     /gene="deoD"
                     /locus_tag="PXE50_000761"
     CDS             6863..7582
                     /gene="deoD"
                     /locus_tag="PXE50_000761"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HDL5621694.1"
                     /translation="MATPHINAPEGAFADVVIMPGDPLRAKYIAETFLEDAKEVTNVR
                     NMLGYTGTYKGRRISVMGHGMGIPSCSIYAKELITEYGVKKIIRVGSCGAVRNDVKVR
                     DIVIGVGACTDSKVNRIRFRDNDFAAIADFDMTLAAHQAAKAKGIEARFGNLFSADLF
                     YSPDVEMFDVMEKYGILGVEMEAAGIYAVAAEYGAKALAICTVSDHIRTGEQTTSEER
                     QLTFNGMIEIALESVLIGDKQ"
     gene            complement(7658..8509)
                     /locus_tag="PXE50_000762"
     CDS             complement(7658..8509)
                     /locus_tag="PXE50_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HDL5621695.1"
                     /translation="MQTHRAIIESIFALAPKNELWATPISGLTVHAADRSIRFNGYIQ
                     DPSLCVVLLGERQICTNGHCQVFGNQEMMFCPVNLPIVTQTLSVAENQPYLAISLRLD
                     FDLIAKIITQLPPQKISENINQRTKWELENEIKDCLLRLLNLLNSPNHIHFLAPLILN
                     ELYFYLLQSEQGGYIRSLLSQDGNIAKIANATKILERKFADTLNMSALAEEVGMSVAG
                     FYAHFKSVTSMTPLQYQKSLRLNAAREKLQAGVSVSETAYQVGYESPSQFSREYKRQF
                     GESPKGR"
     gene            8624..9055
                     /locus_tag="PXE50_000763"
     CDS             8624..9055
                     /locus_tag="PXE50_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="organic hydroperoxide resistance protein"
                     /protein_id="HDL5621696.1"
                     /translation="MKIFYHTSATATGGRDGRTQVDDGSIGFDLVGFQNESGKVGTNP
                     EQLFAMGYAACFDSAMNHVAPTLGIKPTKSSTTVAVGIGQKADGAFGLDLDITITVEG
                     ISAEEAKTLISKAHEVCPYSNATRGNVDVRLHVKVVSEFDL"
     gene            9072..9752
                     /locus_tag="PXE50_000764"
     CDS             9072..9752
                     /locus_tag="PXE50_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HDL5621697.1"
                     /translation="MKMLDFETTVKTRQSIRKFLPLPMTETEIKQILADAQNAPSACN
                     TQPWLVHVASGETLARLKARFKKTFEAGINDADFEFNQTKFTGDYEPRWRNQYSHVFT
                     TSYGIPREDKAGRQVVYDDNIVGYGAPHMAFLFMPSIDGHDVNIASDVGMYSQTFLLS
                     LTARGFGGIPQLALAMFAKDVREELGIPEHYKLLHAISFGHPDWDAMQNKHHLGRVPV
                     EESATLHW"
     gene            9816..10940
                     /locus_tag="PXE50_000765"
     CDS             9816..10940
                     /locus_tag="PXE50_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent flavin oxidoreductase"
                     /protein_id="HDL5621698.1"
                     /translation="MINLFTPYTLNNDVEIKNRLVVAPMTHSASNDDGTISEQERHFL
                     HNRAADMGLFITAATGVMRNGKAFYGQPEALDERYLASLTETANILKNQGTKAILQIF
                     HGGAQAIPALLDGANAVAPSEHANGAKALTADEVKQMIQAFANATDLAIQAGFDGVEI
                     HGANGYLIQQFFSTEFNQRTDEWGGSLEKRLRFPLAVVEAAVSVREKHQRPDFIIGYR
                     FSPEEPGEHGLTMTDTYALIDALCEKPLQYLHISLWDFGKKARRGADTNFTRMQLVHQ
                     HINGRLPLIGVGNLLTGEQIRKAYATGWAEFIALGKAVMLNPNVATLLKDNRDSEIVS
                     ELDPQQADHYGIPDRLWGYCVQGGAWLPPLKGQNGQPMDI"
     gene            11024..11641
                     /locus_tag="PXE50_000766"
     CDS             11024..11641
                     /locus_tag="PXE50_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HDL5621699.1"
                     /translation="MITLHYLNSSCSHRIVWLLEALGLDYELKIYHREESGFAPMEVK
                     ALHPLGKAPVLQDGDLVLAEGNAIIQHLIARYAEGKFEPTRGSEAYSMYHYWLSISAS
                     LFSANLVTMLANRSDLGAFGDYAKAQTPLYFNHIEQTLSDKKWIVGDELTGADFSLCF
                     PLQWGRNFVEMANYPNIARYLEQVENHPAYQKANQKALKLDMNRF"
     gene            11784..12725
                     /gene="argC"
                     /locus_tag="PXE50_000767"
     CDS             11784..12725
                     /gene="argC"
                     /locus_tag="PXE50_000767"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HDL5621700.1"
                     /translation="MSKYKIFVDGAVGTTGLRIHERLSQADDIELLTLPEEQRKDLNA
                     RVAKVAEADLTFLCLPDEASKELVANAPENTRICDTSTAHRVNPNWVYGFPELSGQRE
                     KIQNAKRVAVPGCHATGYIALVRPLVEKGILPADYPLSCHSLTGYSGGGKAMIADYEN
                     ENSPNAFNAPRVYGLTLQHKHLPEMQAVTQMQNPPIFTPVVADYYSGMLVTVPLQIFA
                     LQAVKSGEEIANLLADYYQTSRLIHVHPFQSLPEDGMLAANAYAGKDSLEIFIYGNST
                     QLLLAARFDNLGKGASGAAVQCMNIMLGRDEVEGLEL"
     gene            12817..13671
                     /gene="argB"
                     /locus_tag="PXE50_000768"
     CDS             12817..13671
                     /gene="argB"
                     /locus_tag="PXE50_000768"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005611371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HDL5621701.1"
                     /translation="MQQQEINQFANLLEKSTACLVKWQGKIIVVKYGGNAMINEELKK
                     SVMADLLLLHRLGVKVVLVHGGGLEISQGVKLLGKEPQFINGLRVTDSDTINVVLQML
                     AGKVNKSLVALLKGKGIGLCGIDGAMLQCKKLEAEVDYGFVGDIVKVDPTVIEIALNA
                     GLIPVVSTVGVDENGQAYNINADTAASEIAIALQAEKLVSMTDIAGLLRDRFDESTLI
                     PEVEVSEVQSLIEQGIIAGGMIPKIACCTDFIRAGGSEANIIDGRIDHAILVEMFGGK
                     NGTRFYKK"
     gene            13684..14868
                     /locus_tag="PXE50_000769"
     CDS             13684..14868
                     /locus_tag="PXE50_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HDL5621702.1"
                     /translation="MTSSNTIKQLDKDYIAQTYGRFDLALSHGKGCEVWDFEGNKYLD
                     FTSGIGVNSLGWADEDWLQAVTTQAGKLAHTSNLFFTEPASQLAQKLVAASGLKRAFF
                     CNSGAEANEGAIKTARKYSFDKYGSGRSTVLTLVNSFHGRTISTLASTGQEVFHKHFF
                     PFTEGFEYLPVNGIEALKARLETENVCGILLEVVQGEGGVCPLEADYLHAVQSLCQEK
                     DILFMIDEVQTGIGRTGTLFAYQQFDLTPGLVTLAKGLGGGLPIGAFLLGEKVEMTLG
                     KSDHGSTFGGNPVSCAAANVVIDKINAEFLAQVQQKGQLLQQRLASLPKVKSVSGLGL
                     MLGVEFEEGILAADIVAKCINKGVLFLTAKSKLRLLPPLMISEQQIEQGIRVLEDVLK
                     DS"
     gene            15051..15482
                     /locus_tag="PXE50_000770"
     CDS             15051..15482
                     /locus_tag="PXE50_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDL5621703.1"
                     /translation="MSNQIALLLMSHGSFARAALASAELIVGQQENVAAIGVVAVDNV
                     ADIKRQMEQTIAELNTDKGLIILTDIVGGTPMNLASSQLTHPNVFACSGLNLPLLLEV
                     LMSRDGNLQEIRENLPLAYQNGFSLRTQQDFVSQEDDDDLL"
     gene            15469..15936
                     /locus_tag="PXE50_000771"
     CDS             15469..15936
                     /locus_tag="PXE50_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HDL5621704.1"
                     /translation="MICFSRIDDRLIHGQVVTTWVNLHRIEQIIVLNDAVAADPTQKQ
                     ILTMAAPQGIKVVAFGIEKFGEVLQKTQITRRTMLLFTNSIDVLRTVELGVSIDKLNV
                     GGMRYQARREQLSKAVSVTPEERQAFKTLLEKGVEVTVQMVPNDEKLNLQEII"
     gene            15939..16706
                     /locus_tag="PXE50_000772"
     CDS             15939..16706
                     /locus_tag="PXE50_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HDL5621705.1"
                     /translation="MLTALLVACWAGICALDDIGTQMIRRPLLIAPVVGLIMGDLETA
                     LIIGATLEVMWMGIGNVGAYSAPDMISGTAIGTALGIAAGEASTAVALAVPTSLLAQQ
                     LLILYRSGVCALNPIAERWAASGDFDKIFRIHYIPMLIAFSIRAIPTFLAVYYGADII
                     AQAVSALPAKVITGLNVAGKIIPAIGIGLLMLMMIKKAELWTFLIAGFTLAVYLKLSV
                     LPITLIALPLALIYDLAVSKKAEAAPTKTADEEDYDL"
     gene            16703..17509
                     /locus_tag="PXE50_000773"
     CDS             16703..17509
                     /locus_tag="PXE50_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HDL5621706.1"
                     /translation="MSNKITKQDLNKVFWRMQVLNVTNNFQSMQAIGFLSSFIPVLKR
                     LYKDRPQEERAEAMKRHLKFFNSHVNSDALILGIAAAVEETTKEDEKETVTAIKTGLM
                     GPLAGLGDSLLKFTWLPICGSIGAALALSGNVLGPILMFLLYNSVNIATKYYGIHLGY
                     SKGVDLIHGAGNNILQRLGNMANVVGLMVIGALIASVVKVKVVSQIAAGDNVIKFQEM
                     LDKVMPGLLSLLLTVVIYWILKKTNGKYAATMILATMGICIGLVYAGILG"
     gene            17509..18546
                     /locus_tag="PXE50_000774"
     CDS             17509..18546
                     /locus_tag="PXE50_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein phosphatase"
                     /protein_id="HDL5621707.1"
                     /translation="MDSVYDIIRLEQGRYLFRQQPAQSVQIFFLDNPDSKDSKWLAET
                     DLAEFELKLSACEARPFFLIQSANGEQIVAERTLPVAGMNNFRDMGGYVAHQGKRVKW
                     GKLYRSDHLHNLRDEGVAYLDKLGIQTVIDYRSPNEVAKYPNPPINGREQTFRLDPNA
                     HTAELAAQFSADKHDEDRNLVNKIIAQKAEGNLINRYDIVMAQYRNFVEKAECQTAFA
                     EMLRLATDPENAPLVQHCRGGKDRTGFGAMLLLGILGVSKADIIADYMLTHYNRLARN
                     EEKMAIYRTFTQDQDVLDYLLSLIDTQPEFIEQSLNTIETQYGTIEQYAQRVLGITAK
                     EIEALRANYLA"
     gene            18636..19856
                     /gene="agp"
                     /locus_tag="PXE50_000775"
                     /pseudo
     CDS             18636..19856
                     /gene="agp"
                     /locus_tag="PXE50_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005628146.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glucose-1-phosphatase/inositol
                     phosphatase"
     gene            20164..22107
                     /locus_tag="PXE50_000776"
     CDS             20164..22107
                     /locus_tag="PXE50_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH domain-containing protein"
                     /protein_id="HDL5621708.1"
                     /translation="MSQDIQADLKKILALLSRNRRFQSLFLLLLRSEQFINSDALSTE
                     LQLSVRTVKKEIKLLKEKLEPYGIQIFSRPFYGYKLLIQFEELHTQLKQYFQISQPMT
                     VNNKFESRVNAILRRLLVSQRALKVEDFQSELYLSFTSALTKEFSQVKALLGKYGLIL
                     EAKPYHGMNIVGESYRKIMLTVRLYKYFTQLEHPFGIKEFEQCFACPMTEKIRERLAK
                     TIIHFNLVFSDIYAERFIIYLRYFYNQQPELLLPKLNFNYQQTNEYQFVIKLLEQLRE
                     QDSRFEFNPEVIRFLTYIAIASTDLYRFKDCNSDNYPLLLDKAWEIHRFIFTQFSAYL
                     NLSEIHDDTCRKDLLKMLIPIAMKMMLSISDDVDLGLFNQTELHRNPILAHTVEKLVD
                     DIEKNYGYSLSIREQYFIFDIFSGMVNRIELERKPLRLAIIALNGRLSTQQLKRNIKR
                     YFSDYILKIETKVLYELAIMEDKPYDYYLCNEYGKNMAIPYKPIYFADSSLNENEYAT
                     SLNEVFYHAYQYDEVLPSIKSIEIEAQYRLNEFHLEQEYLNYEQIILENKQDKIKLFY
                     QLNASVEKFEIYYFKNKEDFTLYGYTKFIVMSLNVIEQPQKLKMILNIINKIAQTNFI
                     LNQLCWLDVKSYKYFFTQYKEKS"
     gene            22107..24254
                     /locus_tag="PXE50_000777"
     CDS             22107..24254
                     /locus_tag="PXE50_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HDL5621709.1"
                     /translation="MKRLRYSYLALILGSALPLSAYADGYLSNDNIRQFDARFNFFLA
                     NPLPAPIAKADGRGEAIENLVVKYASDYLNDIYLKEDVIRFRRWQWQDLYTSLDLKTK
                     QKPDYLNTYRLQAEAYFINKQYQEALSQLDQILRRNPNDVHAMAMSVVASRVLENPNT
                     EAERLLALYQISPSIAQKVQQYLHFTDTMLAASYGSEPQTTMIPDTIAVFGQSPNPDG
                     TPSKGLLQRLEKTKEMAEKFPNAKIILSGGPVRYIYAEADVMKKWLIENGVDESRLLL
                     DDVARDTPGNAVGIIDFMKEYGGRKVLGIGTILHLPRAMSVLKSYADSIGYELEIDSA
                     GGGSPPNEKNKKGEALYTFVNVARAMGLFTLGDFENLLAKEQAEKEQREALEKAQQNY
                     LEKLVAERDQAVKNAENSANELEVARQALETAKQAHQQAEEELNKELSKTQEQLKQST
                     EALSRLIIKQNNPFSEHYVVQLNLMEQATYDLYRRLAEIEHTQDWNLWLSDSLSKYRL
                     KNRSTEDYHLLHIGLDHQVSHNWSIGGVFGISQGQIENRTHKVKGTSAGIYAGYRPTS
                     GLFWTNFFNYSHFTNQSGVTKRDNNAYSLSSEIGRNIVMSHQWQITPKLQLGWAKAGS
                     ARMFWAGTGLRLGKVIELNAIKLKPYADISYRFRNRHIDTLDSLSDRHRNVISIGIQA
                     VGNRHYFAIEGSMLHGDALKRSYGLHANYHYQW"
     gene            24267..25385
                     /locus_tag="PXE50_000778"
     CDS             24267..25385
                     /locus_tag="PXE50_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HDL5621710.1"
                     /translation="MKKIKTTLSALALSLSLISVNSWAIPADYLSQDNISQYDKAFNF
                     VLAKVLPAPKGKEDGRGAPIEHLVIQYAPDYVDDPYLKEDVLNFRRWYWQAMYASLDQ
                     KVKEKPTYLNTYRLQAEAYFVNKEYREALSQLDQILRQNPRDIHALAMTVLASRVLED
                     TEQETARLSALKQLAPEVAQRMTDFFAFTEQTLAASYGNEPQTAMIPDTIAVFGSTPN
                     KDGTPSPLLLDRLQKTKEMAQKFPQAKIIVSGGAVKTEFAEADVMAKWLSENGIEKDR
                     LLLDPVARDTPGNAVGIIKLMQTYNGKKVLGIGTLQHIPRATAVLKGYAQHIGYPIEM
                     DSVGGGKPATPGKAKIEALYTYVNVARSMGLFELGDFK"
     gene            complement(25446..26708)
                     /gene="rho"
                     /locus_tag="PXE50_000779"
     CDS             complement(25446..26708)
                     /gene="rho"
                     /locus_tag="PXE50_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017492510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HDL5621711.1"
                     /translation="MHLTQLKNTPVSKLVEMGENQMGLENLARLRKQDIVFAILKQHA
                     KSGEDIFGQGVLEILPDGFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLQTGDKIEGKI
                     RPPKEGERYFALLKVDSVNDDKPEASRSKILFENLTPLHANSRLKMERGNGSKEDLTA
                     RILDLAAPIGKGQRALIVAPPKAGKTVLLQNIAQSITHNHPECELIVLLIDERPEEVT
                     EMQRTVRGEVIASTFDEPATRHVQVAEMVIEKAKRSVEHKKDVVILLDSITRLARAYN
                     TVTPVSGKILSGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVDTGSKMDEVIFE
                     EFKGTGNMELHLSRRIAERRIFPAIDFNRSGTRKDDLLMAADELQKTWMLRKVLNPMD
                     EVDAIEWLIDKLMMAKTNEEFFEIMKRS"
     gene            complement(26894..27841)
                     /gene="cysK"
                     /locus_tag="PXE50_000780"
     CDS             complement(26894..27841)
                     /gene="cysK"
                     /locus_tag="PXE50_000780"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015939738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HDL5621712.1"
                     /translation="MTIYADNSYSIGNTPLVRLKNFGNGNIVVKVEGRNPSFSVKCRI
                     GANMVWQAEKDGILTKDKEIVDATSGNTGIALAYVAAARGYKLTLTMPETMSTERKRL
                     LRGLGVNLVLTEGAKGMKGAIAKAEEIAASDPDRYVTLKQFENPANPAIHQQTTGPEI
                     WDATEGKIDVLVAGVGTGGTITGVSRAIKQDKGKQIISVAVEPSESPVITQTLNGEEV
                     KPGPHKIQGIGAGFIPKNLDLSLLDRVEQVSSEEAITTARRLMAEEGILGGISSGAAV
                     AAADRIAKLPEFADKLIVVILPSASERYLSTLLFEGIEA"
     gene            complement(28015..29511)
                     /gene="pepA"
                     /locus_tag="PXE50_000781"
     CDS             complement(28015..29511)
                     /gene="pepA"
                     /locus_tag="PXE50_000781"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HDL5621713.1"
                     /translation="MEFSVKNGSVEKQRTACLVVGVYEPRRLCSAAEQLDKLSNGYIS
                     TLLRRGDLEGKAGQTLLLHNVPNVLADRVLLVGCGKERELTERQYKQIIQKSVQTINE
                     TGSMEAVSFLTELHVKGRTPYWNVRFAVEAIQEQLYAYNDFKSIKPEVRRELRRVIFN
                     VAHRKDLPDAERALEHGKAVALGISHAKNVANCPPNVCNPHYLAELAKGLAYDYPAIS
                     TTIVDEKQMAELGMNAYLAVSRASENEAFLSVIEYKGNPNADAKPIILVGKGMTFDSG
                     GLSIKPAEAMDEMKYDMCGAATVYGTIKAIAEMKLPLNVIGLLAGCENAVDGKAYRPG
                     DILTTMSGLTVEVLNTDAEGRLVLCDALSYVERFEPELVIDIATLTGACMIALGNHNS
                     GLMSPHNGLANELLAAAEQADDKAWRLPLGEEYQEQLKSNFADLANIGGRLGGACTAG
                     QFLSNFTKKYTWAHLDIAGTAWKSGAAKGATGRPVSLLTQFLINKAQV"
BASE COUNT         8723 a         5589 c         6412 g         8831 t
ORIGIN      
        1 attttccaag aatttagcca taaaaaatgt agagtctata cttattttag tagtgcggtg
       61 atcaatattt taaataaaag taaccatatt gaagtggtag cattaagagt gaatgtagat
      121 aatcctgctt atattgagag ctatgaattg cttgaaaaat taggcgttca gattgttgat
      181 attagagaat aaaatgaaga aatatttaat ttcattagaa aaagatgtaa aaagacgaga
      241 gctatttttt agccagccta atacggaaga ttttgaggtg ttcagtgcca ttaatacaat
      301 gagtagtgat tgggaggcat taaataacca ttttgatttg gctctgtttg aacagcgata
      361 tgggcgtaaa accactaagg gcgaagtagg ttgtacttta agccatttag ccgtttacca
      421 aaaaattgcc gaagatagca ctattgcgga agatgattac tgcctagtct gtgaagatga
      481 tgccttattt gccgatgatt tccaaaaaca tcttgatgct ttattagcac aaaatttaaa
      541 agtcgatatt attttagttg ggcagtcgaa aattccaact tttaacgata gcgaattaga
      601 gcttaattac ccatcaacct ttggcttttt gcaaaaaaat attccgaata gccaatataa
      661 atatgcttat tcttacctga attattttgc tggtacggtt gcatatttaa ttaaaaaatc
      721 gaccgcttgt cagtttttag cacaatgtgc cggaaaaaat ccatactggc ttgccgatga
      781 ttttatttta tttgaaaaga atttcaaatt tgatgtgtta attgtccgcc cgttaatggc
      841 gatagaaaat cctgttctaa ttagtaattt ggaagattta cgtggttcat taaataataa
      901 tttatttaaa aaagccgtaa aatatccact taaaaaatta ctggcaatta aacgtaattt
      961 tactcagcga aattcataat aggtctgaaa tgtcagcact cattaactta ttttatcttt
     1021 acgatccgtg gtttttccat tttttaagaa tgtcgtttgt agtcgggctt gttgcttgtg
     1081 gctatttggt tttccaaata atcaagggca aatcgaatgg cattattatt cctaaagata
     1141 gcctgattgc aattattgca ttaatcggct ttagcattat tccattattg attaacagta
     1201 caaaagaaat tggtgtgctg gcaatgtatg tcaaaatgct gattttgttt gtgttcggga
     1261 ttgcgattta taatgttttt tatcataacc aacaaggtaa aactttattc gttcgtgatt
     1321 taaaaatcgg cattgctatt caatggattt gtggtgtgac agccttatta ggtttgccgt
     1381 ttatggtgga ttttttatta tccagcaatg caatgatgcc acgttttttt ggttcggaac
     1441 aagaataccg tttatataac atcacttctt ccgccttttt ccaattaagc attttttatt
     1501 taatgctatt acatttttta ttggcatata ataaaaaaac agatgtggtg aatgagtggt
     1561 ttttattttt attattatgt gttggtttaa tttccggtag aaccttttta ttaatgtcag
     1621 taataagtat tgcactctat tttaaatgga aatatatatt gccactgatt gccttcactg
     1681 cgttaattct atttttggcg attgtttttc cggaaaaccg ttatgttgaa cacgccttag
     1741 aaccggtaat taatttattg tccggcaccg gaaaagtcag ctcttcaacc gataatttag
     1801 tgaaaaacca tctgttttta ccgactttaa atcagtttat ttccggtgat ggtttatatt
     1861 acaccgaaac tggtggctat tatggtggat cggattccgg ctatattcgc caagtattat
     1921 atggtggagt aagttatatg ttggcgtgtt ttgccttcac ttactatttt gtacgcaaag
     1981 tggcggtgaa ttggtttgaa ggcagttgga tttttacctt atccaccatc ggcattttag
     2041 ctattttaaa tattaaagca gatacctttg ctttcccggg gctgatgatg ctgtttctaa
     2101 tgttcttgtc gctgtttgga acaagcggtc gaaatgtaac atttttttgc aaaaacaaag
     2161 aggctgaata tgtttagtat tattgtgcct tcttataacc gtaatcaaga aatcaatgcg
     2221 ttgcttgaga gtttaaagca acaaactgca tataattttg aagtgatcat tgttgatgac
     2281 tgctcaaaaa taccggtcag tgaaacttta ggaattttaa atgaatttaa cgatatttct
     2341 actaaagaaa aagtaagaga attacttact agagatagtt tatctcatat ttatagctat
     2401 ccatttgatg tgaaagtggt gcgaaataac ccaaatgttg gggcggcaca aagccgaaat
     2461 gtaggggcaa ctaatgccac acaagaatgg ctactgtttt tagatgatga tgaccgcttt
     2521 atgcctgaaa aatgcgaacg tttagcggca gagattgcga acaatccaac tgccaatttt
     2581 gtgtaccacc cggcaaaatg tgaaatggta aatgagggtt ttacttatgt caccaagccg
     2641 tttaaacata aaagtgagct aactaaagaa aacattctaa aagcgaataa aattggcgga
     2701 atgccgatga ttggcttgaa aaaatcactc ttttgtaaaa ttggtggatt atctgaccgc
     2761 ttgcgatcac ttgaagatta tgatttctta ctgaaattat tggaagaacc gagttttgag
     2821 ccattgtatg tggacgaagc cttgacctat tgtactttcc ataccaaacg ctccagtgtt
     2881 tcaaccgata ccactaatac agaaaaggct attgagtata ttcaacaaac gtatatcaaa
     2941 acacctgagg cgaataattt taagctcaat tcgctttata ttttaagtta tccacacgta
     3001 atgaatttat cccgcaaggc agccggttat tattttgaga tgtttaaaca gactaaaaat
     3061 atcaaacaac tgattattgc gttggttatt tttatttcgc cgaagttggc gattaatttg
     3121 aaaaggttta tgtaatgaaa ttttccgttt taatgtcgtt atacattaaa gagcaaccgc
     3181 aatatttaag agaatgtttt gaaagcttga aagtacaaac tgtgcaggct gatgaaatcg
     3241 ttgtttgttt tgatggtgca gttacgcctg aattagaggc gattgtagaa gaatatagtg
     3301 caattttgcc gattaatgcg gtgaaattcc cacaaaatcg aggtttaggt aaaacgctaa
     3361 atgatgggct aacctattgt aagaatgaat gggttttcag aatggataca gacgatattt
     3421 gtatgccgga acgtttcgag aaacaagtgg catttattga acagaatcct gaaaccgtga
     3481 tttttggcgg ccaaattgct gaatttgggc aagatattca cgatcttgtc gcttaccgca
     3541 atgtaccaac cacggtggag gaaatcgtca gattcactcg cttgcgttgc ccgtttaacc
     3601 atatgacggt tgcttatcag aaatccaaag tgttggaagt cggtggctat caagatctgc
     3661 aagaagatta ctatttatgg atcaaactca ttgctcaatt taaacaagtg gcaaacttgc
     3721 cggatttatt agtgtatgcc cgagtcggta acggaatggt tggcagacgc cgtggaatgg
     3781 cccaagcaga ggcagaatgg cgtttatata aattaaaaaa ccgctgccag attcacgatc
     3841 cgatttcagg ttttgggatt ttcataatgc gtgcaattcc tcgtttatta ccggtttcag
     3901 cactgaaaaa agtgtacggt ttgctcagaa aataaagcta aaaaaaccac agattgctct
     3961 gtggtttttt gttattgatt cttcaaaatc tcattcatta attgaatatc aatatggcag
     4021 tagccgttcg ggttttttac taaatattct tggtggtact cttcggcagg gaaatattgc
     4081 tctaacattt ggttttccac tgccagcggc tgatcaaatt gggtttgtaa ttgtgcaagt
     4141 gcggcggtta ccaccggttc gtcttgtggg tcggtataat aaataccggt gcggtattga
     4201 ataccgatgt cgccaccttg tttgttaatg ctcaccgggt ctattacttt aaagaagtaa
     4261 tctagtaatt ttgccaagct aatttgattg gcatcataag tcacttttac cacttcagcg
     4321 tgtccgctac cggcacacac ctcttgatag cttgggttat cggtattacc gttggcatag
     4381 cctgattgtg ccttaatgac acctttaatc cgttgcataa aagattccac gccccagaaa
     4441 cagccaccgg ctaagtaaat ttcacgaata ttttgcatat tacctctcta taattgtaaa
     4501 tttttcgata aatttgactg cttgtgatga ataataaaat accataattt agtttttgtc
     4561 aaattttgtc ttgaatgatg ataatttcac aagatttttt gcctaaaaat aggtatagta
     4621 tcgtcacctt ttttaatcaa tttataatta gaggttctat gggtactctt aacagctttt
     4681 taggcattat tgttttacta ttcattgcat ttttattttc gagcaataaa cgtgcaataa
     4741 acgtgcgtac cgtattaggc gcattagcat tgcaggtagc tattggtgca ttggtgcttt
     4801 atgtgccggc agggcgtgat gccttgaatg cgatggcaac aggtgtgtca aaagtgattt
     4861 cttacggtaa tgaagggatt tcatttttat tcggtggctt agtcagcgac aaaatgtttg
     4921 aagtatttgg cggcggcggc tttgtgttcg ctttccgtgt acttccggtg attattttct
     4981 tctctgcact catttctttg ctttactaca ttggagtgat gcaatgggta atccgtattt
     5041 taggtggttt attacaaaaa gcattaggta catctaaagc ggaatctatg tctgcggcag
     5101 ctaatatttt cgttggccaa actgaagctc cattggtagt aaaaccttat atcagcaaaa
     5161 tgacagaatc tgaactcttt gcgattatgg cagggggctt agcttctatt gcaggttctg
     5221 ttatggctgg ttacgcagga atgggcgtac cattaacgta cttaatcgca gcctccttta
     5281 tggcggctcc ggcagggtta ttattcgcca aaattatggt gccacaaacc gaaaaattcc
     5341 gtgatgaact agaagcggta gatttagaaa aaccggcaaa tattcttgat gcagcagctt
     5401 caggtgcttc ttcaggtatg caactggcat taaacgtagg ggcaatgtta attgcattcg
     5461 tggcgttaat tgcattagtg aatggtattt taggaggtat tggcggctgg ttcggttatg
     5521 ataccttaaa cttaggtcaa attttcggct gggtatttaa accgcttgcg tgggtaatcg
     5581 gtgtgccttg ggaagaagca gaaattgcgg ggcagatgat cggcttaaaa ttagcggtaa
     5641 atgaattcgt gggttattta gagtttgcta aatacttagc tcctgagtca accgtacatt
     5701 taacggataa aactgttgcg attattacct ttgcactttg tggctttgcg aacttcagct
     5761 cgattgcgat tttaatcggt ggtatcgggg caatggctcc aagccgtcgt ggtgatattg
     5821 cccgacttgg gattaaagcc gtcattgctg gctcacttgc caacttaatg agtgcaacca
     5881 ttgccggctt gtttatcggc ttgggtggag cagttctcta atccagtttg tataaaacca
     5941 ctagaaatag tggttttatc tttttttatc tgacgtaaac ggttgctttt ggtttgtcta
     6001 tttacaagcg gtcagatttt tataaaattt taccaaccac cacgcattta ataaaaggag
     6061 acactatgaa tttaaaaaaa tccgctgaga ttgctctttc gttgatggat ctcaccacat
     6121 taaatgacaa tgatactgat gagaaagtca tcgcattatg ccaacaagcg aacaccaagt
     6181 ttggcacacc ggcagcaatt tgcatttatc cacgttttat cccgattgcc cgcaaagcat
     6241 tgaaacagca aggtatcgag caagtaaaaa ttgcgacagt cacgaatttc cctcacggta
     6301 atgatgatat tgaaattgcg gtagctgaga ccaaagccgc agttgcttat ggggcagatg
     6361 aggtagatgt ggtattccct tataaagcat taattgcagg taatgagcaa ataggtttcg
     6421 acttggtaaa acaatgcaaa gcagtttgtg ctgccaataa tgtgttgctt aaagtgatta
     6481 ttgaaaccgg cgagttaaaa tcagcagagc ttattcgcaa agcaagcgaa atttcgattc
     6541 aagcaggggc tgattttatt aaaacctcaa ccggcaaggt ggcagtgaat gctacccttg
     6601 aatctgcccg cattatgctt gaaaccattc gtgatttagg tgtggcagac cgtgttggct
     6661 ttaaagctgc aggtggggta aaaacctcgg aagaagccgc ccaatatctt gcacttgcgg
     6721 aatctatttt aggcaatgac tgggtgagtg catcacattt tcgcttcggt gcatcaagtt
     6781 tattagctaa tttattagca acattgaatg atgaacagca gcaagctgtt caaggttatt
     6841 aattaataaa gaggaacata aaatggctac tccacacatt aacgcacctg aaggtgcttt
     6901 cgctgacgtt gtaattatgc cgggcgatcc gcttcgtgct aaatatatcg ctgaaacctt
     6961 tttagaagat gcaaaagaag tgaccaatgt tcgcaatatg ttaggctaca ccggcactta
     7021 taaaggtcgc cgcatttcag taatggggca cggtatgggg attccatctt gctcgattta
     7081 cgctaaagaa ttaattactg aatatggcgt gaagaaaatt atccgtgtcg gctcgtgcgg
     7141 tgcggtacgt aatgatgtca aagtgcgtga tattgtcatc ggtgttgggg cttgtaccga
     7201 ttctaaagta aaccgtattc gcttccgtga taacgatttt gcggcgattg ctgattttga
     7261 tatgacatta gctgctcacc aagcagctaa agcgaaaggc attgaagctc gtttcggtaa
     7321 tttattctca gccgatttat tctactcacc tgatgtcgaa atgtttgatg taatggaaaa
     7381 atacggcatt ttaggcgtag aaatggaagc agcaggcatt tatgcggtag cggcagagta
     7441 tggagcaaaa gcattagcaa tttgcaccgt ttcagaccat atccgcaccg gtgagcaaac
     7501 tacctctgaa gaacgtcaat taacctttaa tggtatgatt gaaattgcgt tagagtcagt
     7561 attaattggc gataagcagt aatttctaac ctgacaagcg gtgaaatttt gcaaaaaatt
     7621 tgcagaattt gaccgcttgt tatttttgat tcttccttta tcttcctttc gggctttcgc
     7681 caaactgcct tttatattct cgactaaact ggcttgggct ttcatagccg acttgatagg
     7741 cggtttcact cacgcttact cctgcttgta gtttttccct tgccgcattt agtcttaacg
     7801 atttctgata ttgcagtggt gtcattgaag ttacgctttt aaaatgagcg taaaaccccg
     7861 ccacgctcat tcctacctct tcagccagtg ctgacatatt tagtgtatcg gcaaattttc
     7921 tttctaagat ttttgttgca ttggcaattt tagcaatatt gccatcttga gagagtagag
     7981 agcgtatata gccaccttgc tcagattgta ataaatagaa atagagttcg tttaatatca
     8041 atggtgcaag aaaatgaata tgatttggag aattaagcaa atttagtaag cgtaacaaac
     8101 agtctttaat ttcattctcc agctcccatt tagtgcgttg attaatgttt tcacttattt
     8161 tctgtggggg aagctgcgtg ataattttgg caataagatc aaaatccaag cgtagtgaaa
     8221 tcgcaagata aggctgattt tctgcaactg ataaggtttg ggtaacaatc ggcaaattca
     8281 cagggcaaaa catcatttcc tgattaccga agacttggca atgtccattg gtacagattt
     8341 gccgctcgcc taataatact acacataaac ttgggtcttg gatataaccg ttaaatctaa
     8401 tagaacgatc ggcagcgtga acggttagcc ctgaaatggg agtagcccaa agttcatttt
     8461 tcggagcgag ggcaaaaata gattcaataa tagctcgatg agtttgcata ataatctcac
     8521 ttttagaaaa ttaggcatat tttatagaaa atcaggcaag acgacaaata gcaaaaagcg
     8581 gataatatcc ccaatcaaat aaagcattta ataggagcaa aatatgaaaa ttttttatca
     8641 cacatcagca actgcaaccg gtggtcgtga cggcagaacc caagtggatg acggttctat
     8701 cggttttgat ttagtcggtt tccaaaatga aagtggcaaa gtaggcacta atccggaaca
     8761 attattcgca atgggctatg ctgcctgctt tgacagtgca atgaatcacg ttgccccaac
     8821 cttaggcatt aagccaacca aatccagtac cactgttgca gttgggattg gtcaaaaagc
     8881 tgatggtgct ttcggcttag atttagatat taccattact gtggaaggca ttagtgcgga
     8941 agaagcgaaa actttaatta gcaaggcaca cgaagtttgc ccatattcaa atgcaacccg
     9001 tggtaatgta gatgtgcgtt tacacgttaa agtcgtgagt gaatttgact tataaaaaat
     9061 aaatagggga aatgaaaatg ttagattttg aaaccacggt aaaaacacga caatcaatcc
     9121 gcaagttttt accgcttccg atgacggaaa ctgaaatcaa acaaattctt gccgatgcac
     9181 aaaatgcccc ttcggcttgt aatacacagc cgtggttagt acacgttgcc tctggtgaaa
     9241 cgctagcacg cttaaaagct cgttttaaaa agacttttga agcgggcatt aatgatgcgg
     9301 attttgagtt caatcaaacg aaatttaccg gtgactacga accacgttgg cgtaaccaat
     9361 acagccacgt ttttaccacc agctatggca ttccccgtga agataaagcc ggtcgccaag
     9421 tggtgtatga tgacaatatt gtcggttatg gtgcgccaca tatggcattc ctatttatgc
     9481 caagcattga cggacacgat gtcaatattg ccagcgatgt tggtatgtat tcgcaaactt
     9541 tcttgctctc actcaccgct cgtggttttg gcggcattcc gcagcttgcc cttgcgatgt
     9601 ttgctaaaga tgtgcgtgaa gagttaggca ttcctgaaca ttacaagctc ctccacgcca
     9661 tttctttcgg acacccagat tgggacgcta tgcagaacaa acaccattta gggcgtgtgc
     9721 cggtggaaga gagtgcgacc ttacattggt aataaacaag cggttgattt ttcgcaaaaa
     9781 tttgcgaaat caaccgtatt ttttaggaga atacgatgat aaatttattt accccttata
     9841 ctctgaataa cgatgtagaa attaaaaacc gccttgtagt tgccccaatg acccattccg
     9901 cctccaacga tgacggcaca attagcgagc aagaacgcca tttcttgcat aatcgtgcag
     9961 cagatatggg cttatttatc accgcagcaa ccggggtaat gcgtaacggc aaagcgtttt
    10021 acggtcagcc ggaagctctt gatgaacgct atttggcaag cctgacagaa actgccaata
    10081 tcttgaaaaa tcaaggcacc aaagcgattt tgcaaatttt ccacggtggg gcacaagcta
    10141 ttcctgcctt gcttgacggg gcgaatgcag ttgcgccgtc cgagcacgcc aacggtgcta
    10201 aagccctaac ggcggacgaa gtgaagcaaa tgatccaagc tttcgctaat gccaccgatt
    10261 tagctattca agccggtttt gatggtgtgg aaattcacgg ggcgaacggc tatttaattc
    10321 aacaattttt ctctactgaa tttaatcaac gcactgatga atggggcggt agccttgaaa
    10381 aacgcttgcg tttcccgtta gcggtggttg aggcagcggt cagcgtgcgt gaaaaacacc
    10441 aacgccctga ttttattatc ggctaccgtt tctcaccgga agagccgggc gaacacggct
    10501 taaccatgac cgatacctac gccctgattg atgctttgtg cgaaaagccg ttgcaatact
    10561 tgcacatttc actctgggat ttcggcaaaa aagcccgccg tggtgcagat accaacttca
    10621 cccgtatgca actggtacac caacacatca acgggcgttt accgctgatc ggcgtgggta
    10681 acttattaac cggtgaacag atccgtaaag cttatgcaac aggctgggca gaatttatcg
    10741 ccttaggtaa agcggtaatg ctcaacccga acgtggcgac cttgttgaaa gataatcgag
    10801 acagtgagat tgtcagcgaa ctcgacccgc aacaagccga ccactacggc attcccgata
    10861 gactatgggg ctactgcgtg caaggtggtg cttggttacc gccgcttaaa gggcaaaacg
    10921 ggcaaccaat ggatatttaa tcattacaga caagcggtca tttttttgta aaaatttgca
    10981 attaagtgac cgcatttttt caattatctg aaggagaaaa attatgatta cgttacatta
    11041 cctgaacagt tcctgctctc accgcatcgt ttggttgttg gaagccttag gcttggatta
    11101 cgagctaaaa atctaccatc gtgaagagag cggttttgca cctatggagg taaaagcctt
    11161 gcacccactt ggcaaagccc ctgtgttgca agatggcgat ttggtgcttg ccgaaggcaa
    11221 tgcgattatc cagcatctga ttgcccgtta cgccgaaggg aaatttgagc cgactcgtgg
    11281 tagcgaagcc tattcaatgt atcactactg gttgtcgatt tctgcttcat tattctcggc
    11341 aaaccttgtg acaatgttgg ctaatcgctc tgatctcgga gcttttggcg actacgcaaa
    11401 agcgcagact ccgctgtatt ttaaccatat tgagcaaaca ctttcagata aaaaatggat
    11461 tgtgggtgat gaactaaccg gtgcggattt ttctctctgt ttcccactac aatgggggcg
    11521 taattttgtt gaaatggcaa attacccgaa tattgcacgc tatttagaac aggtggaaaa
    11581 tcaccctgct taccaaaaag cgaatcaaaa agccctgaag cttgatatga atagatttta
    11641 atactctttt taatccctaa cattttgtta gggatttttg aatataaaat caattaatgt
    11701 gaataattat tcaaaaataa acttgagttt agccttaaat agccttagac taccgagcag
    11761 aaaaagtcaa agaaggattt tcaatgagca aatacaagat ttttgttgat ggggcagtag
    11821 gaacaaccgg gctacgcatt cacgaacgtt taagccaagc ggacgatatt gaattattaa
    11881 ccttgcccga agagcagcgg aaagatttga acgcccgtgt ggcaaaagtc gcagaggcgg
    11941 atttaacttt cctctgtttg ccggatgaag cctcaaaaga attagtagca aatgcaccgg
    12001 aaaatacccg aatttgcgat acttcaaccg ctcatcgggt caatcctaat tgggtttatg
    12061 gttttccgga attgagcgga caacgtgaaa aaatccaaaa tgccaagcgt gttgcggtgc
    12121 cgggttgcca tgccacgggc tatattgcgt tggttcgtcc actggtggaa aaagggattc
    12181 tgcccgccga ttacccttta agttgtcatt ccttaaccgg ctattcaggc ggtggcaaag
    12241 cgatgattgc tgactatgaa aatgaaaaca gcccaaatgc tttcaatgcc cctcgtgttt
    12301 acggtttaac tctccaacac aaacatttgc ctgaaatgca ggcagttacc caaatgcaaa
    12361 acccaccgat tttcacccct gtggttgctg attattacag cggaatgtta gtcactgtgc
    12421 cattgcagat cttcgcctta caagcggtca aatccggcga agaaattgca aatttgctcg
    12481 ccgattacta ccaaaccagc cgactaattc acgttcaccc tttccaatct ctacccgaag
    12541 acggaatgct tgccgcgaat gcttatgcag gtaaagacag cttagagatt tttatttacg
    12601 gcaacagcac ccaactttta cttgctgccc gttttgacaa tttaggcaaa ggggcatcag
    12661 gtgccgcagt gcagtgtatg aatattatgt tgggaagaga tgaggttgag gggttagagc
    12721 tttaaatata aatgtaggga caggtcctgt gcctgtccga taatcatcgc ccatattcgg
    12781 acgggcacag gacccgtccc tacaagagaa agaaatatgc aacaacaaga aatcaatcaa
    12841 tttgcaaatt tattagaaaa atccaccgct tgtttggtga aatggcaggg taaaatcatt
    12901 gtggtgaaat atggcggtaa cgcaatgatt aatgaggaac tgaaaaaatc agtgatggca
    12961 gatctgctgt tacttcatcg tttaggcgta aaagtggtac tggtacacgg tggcgggctg
    13021 gagatttcac aaggcgtgaa attattgggt aaagaaccgc aatttatcaa cgggttgcgt
    13081 gttaccgata gcgatacgat taacgtggtt ttgcaaatgt tggcaggcaa agttaataaa
    13141 agccttgtcg ccttattaaa agggaaaggc attgggctgt gtggtattga tggggcgatg
    13201 ttgcaatgca aaaaattaga ggcagaggtg gattacggct ttgtgggcga tattgtgaaa
    13261 gtcgatccaa ctgtgattga aattgctctt aatgcgggct tgattccggt tgtttccacg
    13321 gtgggcgttg atgaaaacgg gcaggcttat aacattaatg cagacaccgc tgccagcgag
    13381 attgcgattg cgttacaagc ggaaaaattg gtctcgatga ccgatattgc aggtttattg
    13441 cgagatcgct ttgatgaaag caccttaatt ccggaagtgg aagtaagcga agtgcagtcc
    13501 ctgattgagc aaggcattat tgccggtggg atgatcccca aaattgcgtg ctgtaccgat
    13561 ttcatcagag ctggtggctc tgaggcaaat attattgacg ggcgaatcga ccacgccatt
    13621 ttggtagaaa tgttcggtgg caaaaacggc acacggtttt ataaaaaata acaggaaagt
    13681 gaaatgacaa gcagtaatac gattaagcaa ttagataagg attatatcgc ccaaacctat
    13741 ggcagatttg accttgcact gtcgcacgga aaaggctgtg aagtgtggga ttttgagggc
    13801 aataagtatc ttgattttac cagtggcatt ggggtaaata gtttaggctg ggcggatgag
    13861 gattggctac aagctgttac cacacaagcc ggcaaattag ctcacacctc aaacctgttt
    13921 tttaccgaac cggcaagcca attagcccaa aaattagtgg ctgcaagcgg tctaaaacgg
    13981 gcattttttt gcaattcagg ggcagaggca aatgaaggag caattaaaac cgcccgcaaa
    14041 tatagtttcg acaaatacgg ttccggtcgt tcaacggttt taaccctcgt gaactctttt
    14101 cacggacgaa ccatttcaac cctcgcatcc actgggcaag aggtattcca caagcatttt
    14161 ttccccttta cagagggctt tgaatattta cctgtaaatg gcattgaggc actgaaagct
    14221 cgcttggaaa ctgagaacgt ttgcgggatt ttgctggagg tggtgcaggg cgagggcggt
    14281 gtttgcccat tagaggcgga ttatctgcac gccgtgcaaa gcctgtgcca agaaaaagat
    14341 attttattta tgattgatga ggtgcaaacc ggcattgggc gaacgggcac actttttgct
    14401 tatcaacaat ttgatttaac tcctggttta gtcacgctcg ctaaaggctt gggcggcggc
    14461 ttgccgattg gtgctttcct gttaggcgaa aaagtggaaa tgacattagg caaaagcgac
    14521 cacggctcaa cctttggtgg caatcctgtt tcctgtgctg ctgcaaatgt agtaatcgat
    14581 aaaataaacg ccgaatttct cgcccaagtg caacaaaaag ggcagttgtt acagcaacgc
    14641 ttagcgagct taccaaaagt taaatccgtt tcaggcttag gtttaatgct cggcgtagaa
    14701 tttgaggaag gcattttagc cgctgatatt gttgcaaaat gtatcaacaa aggtgtgctg
    14761 tttttaaccg ctaaaagcaa gttaaggcta ctcccaccgc tgatgatctc tgaacaacag
    14821 atagaacaag gaatcagagt gttagaggat gtcttgaaag attcttgagt tattataaac
    14881 agtaggaata tcttcttact gttttttatt actattatat agtagcctac tttaatctgt
    14941 tgtcacttta tatttcttct tatgtgtacg atatatcgtg caataacttc ccttgtttat
    15001 ctgtataaca ttttatttaa tagaatgact tataaatcaa ggagtgactt atgtctaatc
    15061 aaattgcgtt attgttgatg agccacggca gttttgcgag ggcggcgttg gcgagtgccg
    15121 agctgattgt cgggcagcag gaaaatgtgg cagctatcgg cgtagtagca gtggataatg
    15181 tagcggacat taaacggcag atggagcaaa ccattgctga gttaaacacc gacaaaggct
    15241 tgattattct caccgatatt gttggtggta cgccgatgaa tcttgcctct tctcaattaa
    15301 cccaccctaa tgtttttgcc tgttcgggtt tgaatttacc tttattgcta gaagtgctga
    15361 tgagccgtga cggcaatttg caagaaattc gggaaaatct accgcttgca taccaaaacg
    15421 gatttagcct acgcacacaa caagattttg tttcacagga ggacgatgat gatctgcttt
    15481 agccgtattg atgaccgttt aattcacggt caagtagtca ccacttgggt taatttacac
    15541 cgtattgaac aaattattgt gttaaatgat gcggtggcag cggatccaac ccaaaaacag
    15601 attttaacga tggcagcacc gcagggaatt aaagtggtcg cgtttggcat tgaaaaattt
    15661 ggtgaagtgt tgcagaagac acaaattacc cgccgtacta tgttgttgtt taccaatagc
    15721 attgatgtgt tacgcactgt agaactaggt gtatcgattg acaaattgaa tgtcggcgga
    15781 atgcgttatc aagctaggcg tgagcagtta agtaaagcgg tttcagttac gccagaagag
    15841 cgtcaagcat ttaaaacctt attggaaaag ggtgttgaag taacggtaca gatggtaccg
    15901 aatgatgaaa aacttaactt acaggagatt atctagctat gctgactgca ctacttgttg
    15961 cctgctgggc aggtatttgt gccttagatg atattggcac acagatgatc cgccgtccgt
    16021 tgttaatcgc accggtggtc ggattgatta tgggggattt ggaaacggcg ttgattattg
    16081 gtgctacgct tgaagtgatg tggatgggga tcggcaatgt tggtgcatat tctgcaccgg
    16141 atatgatttc cggaaccgct attggcaccg cacttggtat tgctgctggt gaagcttcta
    16201 ctgcggttgc actcgcagta ccgacctcac tcttggcaca gcagttactc attctttacc
    16261 gctccggcgt atgtgcattg aacccaattg ctgaacgctg ggcggcaagc ggtgattttg
    16321 acaagatttt ccgcattcac tatatcccaa tgttaattgc cttttctatt cgtgctattc
    16381 caacgttctt agccgtctat tacggggcgg acattattgc ccaagcggtc tctgctctgc
    16441 cggcaaaagt gattaccgga ttaaatgttg caggcaaaat tattcctgcc atcggtatcg
    16501 gtttgctgat gttaatgatg attaagaaag ccgaactttg gacgttctta attgctggct
    16561 ttacgttggc ggtttatctc aaattatcag tattgccgat taccttaatt gcactaccgc
    16621 ttgcgttgat ttacgactta gcagtaagca aaaaagctga agctgcacca accaaaaccg
    16681 cagatgaaga ggattatgac ctatgagcaa taaaattacc aaacaagatt taaacaaagt
    16741 gttttggcgg atgcaggtgc tgaacgtcac aaacaacttc caatcgatgc aggcgattgg
    16801 atttttaagt agctttattc cggtattaaa acgactttat aaagatcgtc cacaggaaga
    16861 acgagcggaa gcaatgaaac gccacttaaa attttttaac agccacgtta attctgatgc
    16921 attgatttta ggaattgccg ctgcggtaga agagactacc aaagaggatg aaaaagagac
    16981 agtaaccgcg attaaaaccg gtttaatggg gccgttagca gggctgggag acagcttgtt
    17041 gaaattcacc tggttaccga tttgcggtag tatcggggcg gcattggcac taagtggcaa
    17101 tgtgttaggc ccgattttaa tgttcttgtt gtataacagt gtaaacattg cgacgaagta
    17161 ttacggtatc catctaggtt acagcaaagg ggttgattta attcacggtg cgggtaataa
    17221 cattttgcaa cgactcggca atatggcaaa tgtggttggt ttaatggtga ttggcgcatt
    17281 aattgcctcc gttgtgaaag tcaaagtagt ttcacaaatt gccgctggtg ataatgtgat
    17341 taaattccaa gagatgttag ataaagtgat gccgggacta ctcagcttac ttttaactgt
    17401 cgtgatctac tggattttga agaaaactaa cggcaaatat gctgcaacga tgatccttgc
    17461 tacgatgggg atctgtatcg gcttagtcta tgcaggaata ctcggctaat ggacagtgtg
    17521 tatgacatta ttcggttgga acagggcaga tacctgttcc gccaacagcc ggctcaatcg
    17581 gtacagattt tctttctgga caaccctgac agtaaggata gcaaatggct ggcggagact
    17641 gatttggcag agtttgagct gaaattgagc gcttgtgaag cccgtccgtt cttcctcatt
    17701 caatcagcaa acggagaaca gattgttgct gaacgcacct tacctgttgc cggaatgaat
    17761 aattttcggg atatgggggg ctatgtcgct catcagggca agcgagtgaa atggggcaag
    17821 ttataccgct ccgatcatct gcataattta agagacgaag gcgtggctta tcttgataaa
    17881 ttgggaattc agactgttat tgactatcgc agcccgaatg aagtcgccaa atacccaaat
    17941 cccccaatta atggcagaga gcaaactttt cggcttgatc cgaatgcaca tactgccgag
    18001 cttgctgccc aatttagtgc agacaagcac gatgaagatc gtaatttggt caataaaatc
    18061 attgctcaaa aagctgaagg taatcttatc aatcgctacg acattgtaat ggcacaatat
    18121 cgtaattttg tcgaaaaagc agaatgccaa accgcctttg ctgaaatgtt aaggttggcg
    18181 acagaccctg aaaatgcacc attggttcaa cactgccgtg gagggaaaga tcgcactggt
    18241 ttcggtgcaa tgttactgct tggtatttta ggcgtgagta aagctgatat tattgctgat
    18301 tatatgctta ctcattataa ccgccttgct cgtaacgaag agaaaatggc gatttaccgt
    18361 accttcactc aagatcaaga tgtgttggac tacctattgt ctttaatcga tactcaaccc
    18421 gaatttatcg aacaatcgct taatactatt gaaacccaat atggtactat tgagcaatat
    18481 gcccaaaggg tattaggtat tactgcgaag gaaattgaag cattacgggc aaattatttg
    18541 gcgtagaacg gtagggtgta atattgaaca cactacaaat ggagaaattt catatgcgtt
    18601 attttgcaaa acattggtat aaaactaccg cttgtctgac aacaattttc acagcatttc
    18661 ctctttttgc tcaaccaatt gaaaatatac caacttccca ctacgaatta gaaaaaatca
    18721 ttatatttag ccgacacggg ttacgttccc ctcttacaga aaaaggcagt gatttagaaa
    18781 aatcaacccc ttataaatgg gcaaattgga gtgtaccgac cggtcattta acccataaag
    18841 ggacgctgtt ggaaacctat tttgggcagt atcttggtca atggctcaca cataatgggt
    18901 tattggacaa ggcaagctgt gaaagtggga agcagattga ggtttatgct aatagcctgc
    18961 aacgtacaat tggcactgca caagctttgg ttgccggtgg gttttcaggt tgtaatgtac
    19021 aagttaaaca ccaccagcag attggaaaga tggatccggt gtttaatcca attattcgct
    19081 ccgatgacca gacatttgtg caaacagcat taagcaaaat tgacctcaat aaaacccatc
    19141 agtatttagc gccatcctat catttattaa gcgaaataat cgattatgct cattcagaaa
    19201 aatgtttgca ggaaaaacag tgtgaatttt ttaatgatgt tggtaaatta aggattaaaa
    19261 aggataaata accaggtgtt tccggtacga tgcgattaag taaaaatatt gtcgatgcct
    19321 tattgctgca atattatgaa ggttttcctt taaaagagat tgcaaataac cagcttgata
    19381 gtgatcagaa atggcaaaca ctcaataaaa ttaaaaacga ttaccaattt atgctacgag
    19441 gagatccatt tattgctaaa catatttcat taccgctatt aaaatatatt cagcaagatt
    19501 taaatagtga aaataaaata acacttttag tcggacacga ttccaatatt atagccttac
    19561 tttctgcatt aaatgttaag ccttataaat tagcacatca atatgaacaa actccaatag
    19621 gagggaaagt ctttattgaa atctggaaag aaaaaagtag ccaagcacaa aaagttaaac
    19681 tggaatatgt atatcaatct actgaccaaa ttcgtaaagc gattccacta agccttgata
    19741 aaccaccgca acatcacatt ttgagtttgg attattgcca agctgaccaa tatggattat
    19801 gcgattatat ggaatttaaa cagttactgg aaaaagtcat tgctgataca ttgtgagatt
    19861 ttgacaaagt gagtgaaaaa ggtagcataa aaaagtcggg acagttgcca gctgctccct
    19921 gtaagatgtt gtttacagca ctagtaatgc tactatcccc aaaaagctgc tgaaaggcag
    19981 cttttttgtt gtatataaaa gtacaccttt ctacgcttca ttctttttct ccaattaaac
    20041 ctaatttagg acttctagtg ataaattcgg tatcatatct taattcacta catatcgtgc
    20101 aagccttaaa attgaaaggg ctgacgaaat cctatttaat tctgacacac ataagggaat
    20161 attatgtcgc aagatattca agccgattta aaaaagatat tggcactatt aagccgtaac
    20221 cgtcgatttc aatcattatt tttattactg ttaagaagtg aacaatttat taatagtgat
    20281 gcactttcta cggagttaca gctttcagta cgaacggtaa aaaaagagat taagttatta
    20341 aaagaaaaac ttgaacctta cggcattcag attttttctc gaccgtttta tggctataaa
    20401 ttattgattc agtttgaaga attacacacg caactaaaac agtatttcca aatatcacag
    20461 ccgatgacgg taaataataa atttgagtct cgggtaaatg cgattttacg ccgattactg
    20521 gtgagccagc gtgcattgaa agttgaagat tttcagagtg agctttattt aagttttacc
    20581 agtgccttaa caaaagaatt tagtcaagtt aaagccttgt taggaaaata tggattgata
    20641 ctcgaagcga aaccctatca cggaatgaac attgtaggtg aaagttatcg taaaataatg
    20701 ctcacagtac gattatataa atattttacc cagcttgaac atccatttgg aattaaagaa
    20761 tttgaacagt gttttgcttg tcctatgact gaaaaaatcc gtgaaaggtt agctaagaca
    20821 attattcatt tcaatttagt attttctgat atttatgctg agcggtttat tatttactta
    20881 cgctattttt ataatcaaca gcctgagtta ttgttaccga agttaaattt taattatcaa
    20941 cagacgaatg aatatcagtt tgtaattaag ttactggaac agcttcgtga acaagacagt
    21001 cgttttgagt ttaatccgga agttattcga tttctgacct atattgcgat agccagtaca
    21061 gatctctacc gctttaaaga ttgtaattcg gataattacc cattgttgct agataaggct
    21121 tgggaaattc atcgttttat ttttactcag ttttctgcat atttaaattt atcggaaatt
    21181 cacgatgaca cttgccgtaa agatttgctt aaaatgctga tccctatcgc aatgaaaatg
    21241 atgcttagca tttcagatga tgtggattta gggctattta accaaacaga actacataga
    21301 aatccaattt tggctcatac agtagaaaaa ttagtggatg acattgaaaa aaactacggg
    21361 tatagcctat ctattcgaga acagtatttt atttttgata ttttttccgg aatggttaat
    21421 cgaattgaat tagaacgtaa accgctccga ctggcgatta ttgcccttaa tggcagatta
    21481 agcacccaac agttaaaacg gaatattaag cggtactttt ccgactatat tttgaaaatt
    21541 gaaaccaaag tgctatatga gcttgccata atggaagata aaccttatga ctactatctc
    21601 tgtaatgaat atggaaaaaa tatggctatt ccctataagc ctatttattt tgctgacagt
    21661 agtttaaatg aaaatgaata tgcaacatca ctcaacgaag tattttatca cgcttatcaa
    21721 tatgatgagg tgttgcctag cattaaatcg attgaaattg aagcacaata tcgcctaaat
    21781 gagtttcatc ttgagcaaga atatcttaat tacgaacaga ttattttaga aaataaacaa
    21841 gacaagatta aactatttta tcaactcaat gcctcggtgg aaaaatttga gatctattat
    21901 tttaaaaata aagaagattt cactttatat ggttatacta aatttattgt gatgagtctt
    21961 aatgtcattg agcaaccaca aaaattaaaa atgattttga atattattaa taaaatagca
    22021 caaacaaatt ttatccttaa tcaactttgt tggttagatg taaaaagtta taaatacttc
    22081 ttcacccaat ataaggagaa atcataatga aacgcttgcg ttattcttat cttgctttga
    22141 tattaggttc agccttacct ttatcggctt atgctgacgg ttatttaagt aacgataata
    22201 ttcggcaatt tgatgcccgt tttaattttt tcctcgcaaa tccactacct gcgcctattg
    22261 caaaagcaga tgggcgtggt gaagcgattg agaatttggt ggtgaaatat gcatcagatt
    22321 atcttaatga tatctatctt aaagaggatg ttattcgttt tcgccgttgg cagtggcaag
    22381 atctctatac gtcattggat ttaaaaacga aacaaaagcc cgattattta aatacttacc
    22441 gattacaggc ggaagcgtac tttatcaata agcaatacca agaagcatta tctcaactgg
    22501 atcaaattct gcggcgtaac cctaatgatg ttcatgcaat ggcaatgagt gtggttgcaa
    22561 gtcgggtatt ggaaaatcct aatactgaag ccgagcgttt attagcgctt tatcaaatct
    22621 ctccaagtat tgcgcaaaag gtgcagcaat atctacattt tacagacact atgcttgctg
    22681 ccagctatgg tagtgagcct caaacaacaa tgatccccga caccatagcg gtatttgggc
    22741 aatcgcctaa cccagacggt actccaagca agggattatt gcaacgtctt gagaaaacca
    22801 aagaaatggc agagaaattt ccgaatgcaa aaattatttt aagtggtgga cctgttcgtt
    22861 atatctatgc agaagcggat gtaatgaaaa aatggttgat agagaatggc gttgatgaaa
    22921 gcagactgtt gcttgatgat gtggcacgag atactccggg aaatgctgtc ggtatcattg
    22981 attttatgaa ggaatatgga ggtagaaaag tattggggat cggtacgatc ttacatttac
    23041 cgagagcaat gtctgtattg aaaagctatg cggattccat tggatatgaa ttggaaattg
    23101 attctgccgg aggcggttct cctcctaatg aaaaaaataa aaaaggtgaa gctctttata
    23161 catttgttaa tgttgctcgt gcaatggggt tatttacctt gggcgatttt gagaatttgc
    23221 ttgccaaaga acaagctgaa aaagaacaaa gagaagcgtt ggaaaaagca cagcagaatt
    23281 atttagaaaa attggtagct gagcgagatc aagcagtaaa aaatgcagaa aattctgcaa
    23341 atgagctgga agtagccaga caggcgttag aaacagcaaa acaggctcat cagcaagctg
    23401 aagaggaatt gaataaagaa cttagtaaaa cgcaagagca gttaaaacag agtacggaag
    23461 cccttagtcg tttaataata aagcagaaca atcctttttc cgagcattat gttgtacagc
    23521 ttaatttgat ggaacaagca acttatgatc tgtaccgtag gttagcagaa atagaacata
    23581 cacaagattg gaatttatgg ctttcggata gtctatccaa atatcgttta aaaaatcgtt
    23641 caaccgaaga ctatcactta ttacatatcg ggctagatca tcaggtttcc cataattggt
    23701 ctattggtgg agtatttggt atcagtcagg ggcaaattga gaataggacg cataaagtga
    23761 aagggacatc tgctggtatt tatgctggtt atcgtcctac aagtggtctg ttttggacaa
    23821 atttttttaa ttacagtcat tttactaatc aatctggtgt aacaaaacga gataataatg
    23881 catacagtct gagtagtgaa attggaagaa atatcgtgat gagtcatcaa tggcaaatta
    23941 cgccaaagct gcaattaggc tgggcaaaag ctggatcagc acgaatgttt tgggctggga
    24001 cagggctacg tttaggaaaa gtgattgaac tcaatgcaat caaacttaaa ccttatgctg
    24061 atattagcta tcgttttcga aatcgtcata ttgatacctt agatagttta tctgatcgtc
    24121 atcggaatgt aatcagtatt gggatacaag cagttggaaa tcgccattat tttgcaatcg
    24181 aaggatcaat gttacacggg gatgcattga agcgttcata cggattacac gcaaattatc
    24241 actatcaatg gtaaatagga gcctctatga aaaaaatcaa aacaaccctt tctgcccttg
    24301 ctttaagcct ttctttgata agtgtaaata gctgggcgat accagctgat tatttgagcc
    24361 aagacaatat cagtcaatat gataaggcgt ttaactttgt attagcaaaa gtactgcctg
    24421 caccaaaagg taaagaagat ggtcgaggag cgccgattga gcatttagtt attcaatatg
    24481 cgccagacta tgttgatgac ccttatctaa aagaggatgt gctgaatttc cgccgttggt
    24541 attggcaagc gatgtatgct tcgcttgatc agaaagttaa agagaagccg acctacctta
    24601 acacttaccg tttacaagca gaggcgtatt tcgtcaataa agagtatcgg gaagcacttt
    24661 ctcagctcga ccaaattttg cgccaaaacc cccgtgatat tcacgctctt gcgatgacag
    24721 tattagcttc aagggtgcta gaagatactg aacaagaaac ggctcgtctt tctgcactga
    24781 aacagcttgc tcccgaagtc gcacaacgaa tgacagactt ttttgccttt accgaacaaa
    24841 cgctggcggc aagctacggt aatgaaccac agacagcaat gatccctgat acgattgccg
    24901 tttttggttc tacgccaaac aaagacggca caccttcgcc gctgttgtta gatcgattac
    24961 agaaaaccaa agagatggca caaaaatttc cgcaagcaaa aattatcgtc agtggcggtg
    25021 ctgtgaaaac ggaatttgct gaggctgatg tgatggcaaa atggcttagc gaaaatggta
    25081 ttgaaaaaga ccgtttgcta cttgatcctg ttgccagaga taccccggga aatgcggttg
    25141 ggattatcaa gctgatgcaa acttataatg gcaagaaagt attaggtatc ggtacgttac
    25201 aacatatccc tcgtgcaaca gcggttctca aaggttatgc acagcacatt ggttatccga
    25261 ttgagatgga ttccgttggt ggtggcaagc cggcaacacc gggaaaagcc aaaatcgagg
    25321 cactttatac ttatgtaaat gtggcgagat caatggggtt gtttgagttg ggggatttta
    25381 agtagttact ttattgacag ctgctattga taaaaatccc gcgttaagcg ggattttttt
    25441 atgttctacg aacgtttcat aatctcgaaa aactcttcgt tagtttttgc catcattaat
    25501 ttgtcgatta gccattcgat agcatctact tcgtccattg ggttgaggac tttgcgtaac
    25561 atccaagttt tttggagttc gtctgctgcc attaagaggt catctttacg agtacctgag
    25621 cggttgaagt caatagccgg gaagatacgg cgttcagcaa tacggcgtga gaggtgtaat
    25681 tccatattac ccgtaccttt gaactcctcg aaaatcactt cgtccatttt tgatccggta
    25741 tccacaagtg cggttgcgat aatggttaag ctgccacctt cttccacatt acgggctgca
    25801 ccgaagaaac gttttggacg atgtaaggcg ttagcgtcca caccaccgga aaggattttg
    25861 ccggaaaccg gggtaacggt gttgtaggca cgggctaaac gagtgatgga gtctaataaa
    25921 atcaccacat cttttttatg ctctaccgag cgttttgctt tctcgattac catctccgca
    25981 acttgaacgt ggcgggttgc cggttcatca aaggttgagg caattacttc accacgtacg
    26041 gtgcgttgca tctctgttac ttcttccgga cgctcatcaa ttaataatac gataagctca
    26101 cattcaggat gattatgggt gatgctttgt gcaatatttt gcagtaacac ggttttacca
    26161 gcttttggcg gggcaacaat taacgctcgc tgacctttac cgattggggc ggctaaatct
    26221 aaaatacgag cggttaaatc ttcttttgat ccattgccac gctccatttt taagcgagaa
    26281 ttggcgtgca gaggggttaa gttttcaaag agaattttac tgcgagaggc ttccggtttg
    26341 tcatcattaa ctgaatcaac tttcagtagg gcaaaatagc gttctccctc ttttggtggg
    26401 cgaattttac cttctatttt atcgccagtt tgtaagttaa aacggcggat ttggcttgga
    26461 gaaacataaa tatcatcagg gccggctaaa tatgagctat ctgatgagcg gaggaaaccg
    26521 aagccgtccg gtagaatttc aagcacgcct tgcccgaaaa tgtcttcacc gctttttgcg
    26581 tgttgtttaa gaatagcaaa tacgatgtct tgtttacgta aacgagccag attttctaag
    26641 cccatttgat tttcacccat ttccacaagc tttgaaacag gggtgttttt aagttgagta
    26701 agatgcataa tttgaatgta aaattgtgat taattaagat tggatttgtt gatattgatt
    26761 agatacggcc aaccgtaaag atgtggcgaa gaataacgca ataggagaca aattgcaaat
    26821 tttttataaa aaataaccgc ttgtttgcaa taaaaatgcc gacatcagcc ggcattttta
    26881 tattaattta atattacgct tcaatccctt caaacagtag cgtacttaaa taacgctctg
    26941 aggctgaagg cagaatcact acaattaatt tatcggcaaa ttcaggtagt ttagcgatgc
    27001 gatctgcggc agcaacggca gcacctgatg aaataccgcc taaaatgcct tcttctgcca
    27061 ttaaacggcg tgcggttgta atcgcttctt cgcttgaaac ttgttcaaca cggtcaagca
    27121 gtgataaatc taagtttttc ggaataaagc ctgcaccaat gccttgaatt ttgtgcgggc
    27181 ccggtttgac ttcttcaccg tttaaagttt gcgtaatgac cggcgattca ctcggttcta
    27241 ccgccactga aataatttgc ttgcctttat cttgcttaat agcacgggaa acaccggtaa
    27301 tagtgccacc tgttcctacg cctgccacta atacatcaat tttaccttca gttgcatccc
    27361 aaatttcagg accggtagtt tgttggtgaa ttgccgggtt tgccgggttt tcaaactgtt
    27421 ttaaggtaac atagcgatct gggtcggaag ccgcgatttc ttcagctttc gcaatcgctc
    27481 ctttcattcc ttttgcccct tcggttaaga ctaaatttac tcctaagcca cgcaataagc
    27541 gtttacgctc ggtactcatt gtttccggca ttgtgagcgt taatttataa ccacgagcgg
    27601 ctgctacata agccaaggca attccagtgt taccgctggt tgcatctaca atttctttgt
    27661 ctttggttag aataccgtct ttctctgctt gccacaccat attcgcacca atacggcatt
    27721 tcacgctaaa acttgggtta cgcccttcca cttttaccac aatattgccg ttgccaaaat
    27781 tctttaaacg caccagcggg gtattgccga ttgagtatga gttgtctgca tagatagtca
    27841 tagtgatatt ccttaataag tattgagatt gggatttatc atacttattt ttaatcgctt
    27901 ttctagtagc tggaatttat ttgatataac taaaaagaat ataggggcgt atgaagagga
    27961 tcggtctgat tttctttttg caaaaactcg ataaaatcag accgcttgtg agagttagac
    28021 ctgggcttta ttgatcaaaa attgtgttag taaggatacc ggtctgccgg tcgccccttt
    28081 ggctgcccca gatttccaag ccgtgccggc aatatctaga tgcgcccaag tatatttctt
    28141 tgtaaagtta gagaggaatt gaccggcagt acaggctccg cctaaacgtc cgccgatatt
    28201 agcaagatca gcaaagttag attttaactg ttcttgatat tcttccccta aaggtaaacg
    28261 ccacgctttg tcatcggctt gctctgcggc agctaagagt tcgtttgcta aaccgttatg
    28321 aggtgacatc agcccgctgt tatgattacc taaggcaatc atgcaagcac cagttagggt
    28381 agcaatatca atcactaatt ccggttcaaa acgttctaca tagctgagag catcacatag
    28441 cactaaacgt ccttctgcat cggtgttgag tacctcaacg gttaaaccag acattgtagt
    28501 gagaatatcc cccggtcgat aggctttgcc atcaaccgca ttttcacagc cggcgagtaa
    28561 gccgataaca ttgagtggta atttcatctc ggcaattgct ttgattgtac cgtaaacagt
    28621 agcagctccg cacatatcgt atttcatttc gtccatcgcc tccgcaggtt taatggataa
    28681 accgccagag tcaaaggtca ttcctttgcc gactaagata atcggcttcg catcagcatt
    28741 cgggttgcct ttatattcaa tcactgaaag aaaggcctca ttttcagagg ctctggaaac
    28801 cgctaagtaa gcattcattc ccaattctgc catctgtttt tcatcaacaa tggtagttga
    28861 aatggcagga tagtcgtagg ctaaaccctt agccaattcg gctaaatagt gaggattaca
    28921 cacattaggc ggacaatttg ctacattttt agcgtggctg attccaagtg ctacggcttt
    28981 tccgtgttct aaagctcgtt cggcatcagg aagatcttta cggtgtgcga cattaaaaat
    29041 cacacggcgt aattcacggc gaacttcagg tttgatgctt ttgaaatcgt tataggcata
    29101 tagttgttct tggattgcct ctaccgcaaa tcgcacattc caataaggtg ttctaccttt
    29161 aacgtgcagt tcggttaaaa agctgacagc ttccattgaa ccggtttcat taatagtttg
    29221 tacacttttt tgaataattt gtttgtattg gcgttcagtt aattcacgct cttttccaca
    29281 gccgactaat aatactcgat cagcgagtac attcggcaca ttatgcaaga gtaaggtttg
    29341 ccctgctttg ccttctaaat ctcctcttct cagtaatgtg ctgatatagc cgttacttaa
    29401 tttatcaagc tgttctgcgg cagaacataa tcggcggggt tcatagacac caacaaccaa
    29461 acaggcggtt ctttgtttct caacactgcc atttttgaca ctaaattcca tttttcctcc
    29521 ttaattttta ttgctacaga ttttataatg ccaac
//
LOCUS       DANLZQ010000019        28291 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.019, whole genome shotgun sequence.
ACCESSION   DANLZQ010000019 DANLZQ010000000
VERSION     DANLZQ010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 28291)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28291)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28291
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.019"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            187..819
                     /locus_tag="PXE50_000782"
     CDS             187..819
                     /locus_tag="PXE50_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621714.1"
                     /translation="MKTKISLIAVFMLGLSGCVHQQNTAQNSDEITPMPDSLLKPQMQ
                     PLPPQDRIVSKDIYHEQTTSNTEVVRDGRYTLISIAPEEGQKYLLEQVVSVKVPNTKN
                     RFTANVQQGLRTTLTNTGLELCFPPIGEQGNAVQTLFTRPLPKVHYQFGPMKLYEALQ
                     MIAGPAYELTLNDITRTICFKARESSFQNPHKPAVAIQRQQLKPRSLRNN"
     gene            831..1568
                     /locus_tag="PXE50_000783"
     CDS             831..1568
                     /locus_tag="PXE50_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03759 family integrating conjugative element
                     protein"
                     /protein_id="HDL5621715.1"
                     /translation="MKRNTINIWLAVLSSVTTNALAQTTSIESSTQTLSQQQSQHQQS
                     QLSDSLKQAKEWGLTIEEWNRYTELMKGERGMWSPNLDPLTALGIEARTAEEREKYAR
                     MLAKKYYERVSKELDFDKVYRQEFEKLYPNELPFEVEPHISQSIGRVIYFTRFDNCDS
                     CKSDLSKILSYANSQTPLDIYIVGQNISDNDIRKWAAENNIDPIKVSKKLITLNHDKG
                     YWFQYSLGKMPAAYQIKQDGEWQSLVY"
     gene            1547..2311
                     /locus_tag="PXE50_000784"
     CDS             1547..2311
                     /locus_tag="PXE50_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HDL5621716.1"
                     /translation="MAISRLLIVITLFAVGISDAKSKPFTGFGTEIDSYIRIAAQRYQ
                     ISEPMLRGLIKMEDGWYGNISPTGATGVGQFTVGTWNWLSETERGKQLGMRLITGKNK
                     GTYADPRRDKYTNTLATALLARWHIEQFHLRRIPATDENLYMAHNIGLDSLHRAMMGK
                     ATKEDILNMRRNGMKSWMTVRDFLNYQKGRFLAHKQEANFMLVSKQGHIHTGVSAFVY
                     PTSEMGKSVKWVEPDNKIIWVEPKSAMIWVEPTNTP"
     gene            2320..2826
                     /locus_tag="PXE50_000785"
     CDS             2320..2826
                     /locus_tag="PXE50_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrating conjugative element protein"
                     /protein_id="HDL5621717.1"
                     /translation="MQHKIKMLLLSLCISHSVWGDLTVIADFGGESAVRFYEALQPEH
                     DENAPNYPNSIPASVSEADILPVVSHKLSPGIIETKQFDLTGIQAIFLIGADNTSAQW
                     LQQNREKLITLNATGLVVNVRTLAELNQLREIVPEIIMLPIPGDDLAERIGIAHYPAL
                     ITETGVSQ"
     gene            2826..5030
                     /gene="traD"
                     /locus_tag="PXE50_000786"
     CDS             2826..5030
                     /gene="traD"
                     /locus_tag="PXE50_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV conjugative transfer system coupling
                     protein TraD"
                     /protein_id="HDL5621718.1"
                     /translation="MSAKHTLEAWLRPPVEFFPAIVHASCAFVSAAAPWSLALHPSIG
                     YSIAAGFGALSFYRAKQGWQIVRYHQNLKRLPNYSMTSKQIPVSNKYLFVGKGFEWKP
                     IHTQRLHDCFSDNGSKYLEPSKLFKMAREYEKRHENWLTRLTSKDSRWNPVRPLPPVE
                     GIPAIHGIEPDEVDVVQSVSSRVGHTVVFGTTRVGKTRLAEVFVTQDIHRGKTPDERE
                     VVVFFDPKGDADMLKRMYAEAKRAGREDEFYVFHLGYPEISARYNPVGRFNRISEVAG
                     RISGQLSGAGNSAAFKEFAWRFVNIVARALVELGNRPNYVQISQFVQNIDSLFLDYAE
                     KFIRKTDPKIWENLATIAAGLDEKALPFGMKDRPLIFVINKYIAESAVFDPILQGLAS
                     AVRYDRTYFDKIVASLLPLLEKLTTGKISELLSPDYADILDERPIFDWESIIRKRGIV
                     YIGLDALSDATVAAAVGNSMFADLVSMAGHLYKFGTNEGLPGDMGRKTKLVKINLHCD
                     EFNELMGDEFIPLINKGGGAGVQVTAYTQTLSDIEARIGSKPKAGQTLGNFNTLYMLR
                     VKEPATAELLTKQLHEVTIKRSTVTSSTTDSSNPDDDKAFSSNTGQRISESTVPMLVP
                     ANITNLPKGQAFALLDGSKLWKIRMPLPAVDKDDMMPQSLRELTDYMRKNYHVVENWW
                     QPAFTEYTPSRDIAEAFEAMSEPQYNSRIDNQVDNFGIDEPYDIDEEENDDE"
     gene            5023..5376
                     /locus_tag="PXE50_000787"
     CDS             5023..5376
                     /locus_tag="PXE50_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL5621719.1"
                     /translation="MSSTKMREENRTNLLDLPNKYRNFDGEFSASCGLDNAEELLIHS
                     QSYFIEWFQQGYSFHQFAEKFAHQGLSLWSADEISMRNTDKSKDVFAFYLAFDHNPSG
                     YILVQCQLDREDSLQ"
     gene            5373..6068
                     /locus_tag="PXE50_000788"
     CDS             5373..6068
                     /locus_tag="PXE50_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03747 family integrating conjugative element
                     membrane protein"
                     /protein_id="HDL5621720.1"
                     /translation="MSEGAKPRRKSGLISLILGKINMLLAAITVSLIFSIILEWVGIA
                     FWWPEEGHLHSQTMMLNEMQWLSDDFSQSLFAKSSTAFATLIIENVYNWLFVYTGIKE
                     WLTSPGNGSMEQWAYHYGRAYIESVIYVVITFIIRLIIIIFTSPLFLLTALSGLTEGL
                     SLRDIRKFGAGRESAYLYHHARRYIMPMMVTAWVVYLSIPFSIHPNFILVPAACLFGL
                     SICITAASFKKFL"
     gene            complement(6098..6457)
                     /locus_tag="PXE50_000789"
     CDS             complement(6098..6457)
                     /locus_tag="PXE50_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621721.1"
                     /translation="MRYLALFPVFLPSIAYPLPQAHKVGDICHAENAPYNYGGLWELS
                     LRGNLVCNYWQFLGDDERKRIESQLDEYGELPLWYSSERETEEDEYPQYWEVEDWDGD
                     DWDIETENEGTNTITDE"
     gene            6655..6981
                     /locus_tag="PXE50_000790"
     CDS             6655..6981
                     /locus_tag="PXE50_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RAQPRD family integrative conjugative element
                     protein"
                     /protein_id="HDL5621722.1"
                     /translation="MSISTSLRKGIVVLVTLSCLPAFASTEQEQLAQAIKQLEAAKLS
                     LQRAEKVAKASPKTREYFNYSAIHRDIETVKKGIQQYINPSRALPRDPNVLRTLSEDY
                     SKLRGQ"
     gene            6981..7214
                     /locus_tag="PXE50_000791"
     CDS             6981..7214
                     /locus_tag="PXE50_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03758 family integrating conjugative element
                     protein"
                     /protein_id="HDL5621723.1"
                     /translation="MSYSPVDAFSAASGIDPFRLKLMIAIIFLSMLLLAVAWALNSGY
                     KGFSFRDKSPFSLLVLFLKGVALLVCVTYFFIY"
     gene            7229..7618
                     /locus_tag="PXE50_000792"
     CDS             7229..7618
                     /locus_tag="PXE50_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2976 domain-containing protein"
                     /protein_id="HDL5621724.1"
                     /translation="MSRIKSLTKHLHSRYLAVMLVFWGTIQHAFAAGPDASKIPDFQI
                     PGVDSNTKDPMEILWIVGKSIITLFAVLLAAGAIFVVVKALISIYNEATSENGKKGWG
                     HFIVALIIGFIVIFFCLWLVKLAVGLF"
     gene            7641..8006
                     /locus_tag="PXE50_000793"
     CDS             7641..8006
                     /locus_tag="PXE50_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03750 family conjugal transfer protein"
                     /protein_id="HDL5621725.1"
                     /translation="MPEQDTTIPFLPTRLNREATVYGGMTVSEFGISAGLGFMLGLIV
                     GLFLWILTDFWLLIPAMAMLLCIATVLIGKGVVAAVKRGKPEAYLNRLIEKKMDDLFN
                     GHKFIRREGFWSIRRYKRK"
     gene            8010..8654
                     /locus_tag="PXE50_000794"
     CDS             8010..8654
                     /locus_tag="PXE50_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03746 family integrating conjugative element
                     protein"
                     /protein_id="HDL5621726.1"
                     /translation="MSQLKSQLHEKDKHIKTTRIFAFLFFIIILVLAGVIYTFPSRLT
                     IYNPPDLRAGSQRAWWEIPKPTIYAFSYQIFQQMNRWMTNGEEDYEKNITALKPFLTP
                     HCEAFLRQDYKDRLRNNELRSRTRMVYEITGRGYSEDKVTVFSEDNWAVNLDLSVDEH
                     FQGQPVKRVYIRFPISIVRMDIDSVKNPWGLGFNCYHSIPKLLEGVEPKTEEKK"
     gene            8654..9535
                     /locus_tag="PXE50_000795"
     CDS             8654..9535
                     /locus_tag="PXE50_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03749 family integrating conjugative element
                     protein"
                     /protein_id="HDL5621727.1"
                     /translation="MKRLPILFASLLISFSGSSFADVLMKWERKPLPIALQVEKERII
                     FVDKNVKVGYPAELDGKLRIQSTGGAVYLKALETFPSTRIEFRDVSTGEIFLFDIVSA
                     TKVANPEESIRMVFDSAVEKQSFSTNRDDEPDLSLTGTRPQLPIPAALTRYAAQSLYA
                     PLRAVEPLEGVRRVAHRLPKKITTLLPAYSIEATPLISWQLDEYVVTAIRLQNKGNSQ
                     ITLDPRELQGQFYAATFQHNWLGGYGGNEDTTTLYLVTEGYANNALIPETHPVKPVGK
                     KVKKTTKVETKPTQSAK"
     gene            9547..11001
                     /locus_tag="PXE50_000796"
     CDS             9547..11001
                     /locus_tag="PXE50_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03752 family integrating conjugative element
                     protein"
                     /protein_id="HDL5621728.1"
                     /translation="MKANKALFVILGIVFTLVGGIVYALFWRSDTPQEPTEQEILDIS
                     IKDLTPEQVRSMGIQGDTPIDTLRTLVTTVKSNERRMDELIDENRQLKQKEDLVNGRI
                     SDAVNNETRKLQEQIADLKMQLFDMATHVNNKSTAQESTPQAEAQPSMTTNKGFGTAG
                     DKLPIGGASMPNVDIGGMYWVEPSDQIGLDAGGKAVSGNTLATKFGFPNDFKGGQTTG
                     NTEKKGLPFFPETDVVTGSQGTTGNSRGKNQITPVYTVPSNSTFLDSVAMTGLIGRIP
                     IDNKVSDAYPFKVLIGRENLIANGIELLDVEGAIVSGTATGDWTLSCVRGDVKSMTFV
                     FNDGRIVSTTNKGNSENIGWLSDSSGIPCVPGERKTNAPEYLGTNFFLAAASAAAQGF
                     SQSQTTTVVDGNSVVGAVTGDQGKFILGQAIGGGLKESADWFRKRFAENFDAVYVPPG
                     HRVAIHIEKEIEIDYNSKGRKVKYGNTSTNTQLD"
     gene            11014..11412
                     /locus_tag="PXE50_000797"
     CDS             11014..11412
                     /locus_tag="PXE50_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03751 family conjugal transfer lipoprotein"
                     /protein_id="HDL5621729.1"
                     /translation="MKALYCIMMSALLITGCTTSTEELLPANGSTMRDIWDKGAGNND
                     LHLYRSQQGRTLDPVDYIPNTEQRAYTRTAENEINNLFPRLPNPDLIMYVYPHQTRSG
                     EPLSIPGYSTVLPFYGRVQYAQPGDRTRGL"
     gene            11412..14249
                     /locus_tag="PXE50_000798"
     CDS             11412..14249
                     /locus_tag="PXE50_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugative transfer ATPase"
                     /protein_id="HDL5621730.1"
                     /translation="MMSFLSEVFSSFKPTKTEVISSEPNENSGESDIIQNKMSEVNGE
                     VQPLKRSGKLTLSQHHRRLYSQAPSFIDHLPWGEYLNQHGVILLDDARSVGAVFDIKP
                     IGTAGRSIEFLSRIRNLVKDALQDSFDELDINPYVVQFYCQDSDDLQPYIDQLRNYIS
                     PIAQNSAFSEEWLRVQAKHFKDIGKPEGLFIDDRVTNTAWSGRIRSTKMVIYRYVDKS
                     NDSNENLIIEQLNNACSRINGALTTAGLQLQRLDGEQIRQWLLRWFNPNPSINFEGLS
                     NNDCYHLFGKQTSNDDLPLAFTDFSEDLFYSQPRNEGSYWYFDGQPHEVVVVNNLRKQ
                     PEVGLMTGEITRGRNINALFDLLPESTIMAITIVIHPQDKLEAHLEKISSRAVGENFE
                     SKYLKEDCQTVQAYLKEGHKLYQAAIAFYVRGKDEKELRTRSRQLRTILLSNNLEPVK
                     ENAEIAPLNSYLRWLPMNFNPQMDAKSHYYTKYYFVQHLANLLPIFGRDTGTGNPGIT
                     YFNRGGAPFNFDPFNRKDRTKNAHKLLLGPTGSGKSATLCGQLCQAMAVYRPRTFVVE
                     AGNSFGLLADYAERFGLTVNRITLAPNSGIVLPLFSEAHRLLDMELNPEDVPEDIEDN
                     DDTDDEGDMQRDLLAEMELTARLMITGGEKKEDEKMSRADRAAIRRAILNAARQTKSE
                     GRQTLTEDVKKALEAISRDENTREERRTRLAEMAESLEMFCTGVNGQFFNREGEIWPE
                     ADLTLVDLAMFAREGYEAELAISYISLINHINSLGEKYQHSDRMILNVTDESHIITAN
                     PLLAKFLVKGSKMWRKLGIWLWLATQNMDDFPNEAAKLLSMVEWWELLNVSASEIDEI
                     NRFRKLSEAQKTMLLSAKKSDRKYTEGVVLATNMEALFRVVPPSLFLALGMTEKHEKA
                     ERRQLMMQHGYSELDAALEVAARIDKARGIA"
     gene            14249..14677
                     /locus_tag="PXE50_000799"
     CDS             14249..14677
                     /locus_tag="PXE50_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621731.1"
                     /translation="MMKQHYRLFNVGPQKSSLGIVSSAVETQLLGFCEQIRQLIGIGK
                     QITLFPHRVVQNHWAIELSGEKGSVHLLLNVTGRSLLPTSNYREWPARLVIEIADHVD
                     AYWFATFLAQQLDLKSNLFFLSTSIVDNSMHNEVTDTNEA"
     gene            14667..14984
                     /locus_tag="PXE50_000800"
     CDS             14667..14984
                     /locus_tag="PXE50_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL5621732.1"
                     /translation="MKPDTTMPKMKKVRAVLKTTLIIIGIILLLLIVGWLAMTYFPTT
                     NFQAWFYETRYAWLGWRFVLYGVIWFLMVKLNRRGQMPLKARLMILSAIPLIEGINLL
                     YLL"
     gene            14995..16512
                     /locus_tag="PXE50_000801"
     CDS             14995..16512
                     /locus_tag="PXE50_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraG N-terminal
                     domain-containing protein"
                     /protein_id="HDL5621733.1"
                     /translation="MTFTVDSYLEYFLTLLAWIINNNIFAVLVQTGLFILPLIFVLIG
                     TWMEVKKQGEDEGNKGDLLITWLSLKFYPAMFVVVLVLAPMIPINLNNIELNVERSKA
                     CGYRIPTSPEDSGYNQMNSELGNQQARVPLWWGLFHQINKGVTHALTASIPCKPDLRQ
                     VRFEVQHEKINNPALLTEVRLFVQQCYVPARQKIQSSQLSLTPAQVRETSWLGGRILL
                     TNSELYPRYRAQQPHSLFPYNASRDNGLPNNGEGGFPNCAEWWDTANTGLKDRLLADV
                     KQNFSAKVIDFFSSKENADESILRTVLRAENMDISRGKVYPGYGGNLDPTFANATTRL
                     TSSVGSLAASFAAFPAFDAMRQALPMVHAFMLMAVIIITPLVIVMSGYSLKTLVTLTF
                     VSFALVSLTFWWELARWLDSWLLSALYDSSAHSRINPYFLENTQDDFIVNFVMGSMFL
                     VLPAIWLGSMSWAGVKIGDIAAGFTTDSLDSKSAGSQGGNLVKKGGKEISAGFNK"
     gene            complement(16565..16945)
                     /locus_tag="PXE50_000802"
     CDS             complement(16565..16945)
                     /locus_tag="PXE50_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621734.1"
                     /translation="MKFIDFGKQLAKPVKFIKQRTAFLPKPLQQAVVFAVIFAGLPLF
                     LVGFTVLRILNGTPVEDISTNDVAYNPNHVENTVNEIEDDSEDSKPEDLWDVIADQDE
                     NQLDGYRDGYFGYGLYQGGYFVKR"
     gene            complement(16969..17634)
                     /locus_tag="PXE50_000803"
     CDS             complement(16969..17634)
                     /locus_tag="PXE50_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4852 domain-containing protein"
                     /protein_id="HDL5621735.1"
                     /translation="MCKKAFPLWGLIFGLLLSTSAFSVSKNFNYQNILMESLHFSENI
                     ELSSLSKDWLLYSDRNTYHKYQNDEFEFQDKIEQAGKKLQKLVDDRKSEEAPIVFTIP
                     VNSEFGNYDFEQGKFEYQPLMNGHMYISSNQYTENLPRKINLYVSNPEFIDGIPMGKD
                     KAKEFLQKRKNSLGNINRSVILYVDVQFEKAEGLDNLTGKVLSYSVKDNKDKVIYSSR
                     QKQ"
     gene            complement(17853..18098)
                     /locus_tag="PXE50_000804"
     CDS             complement(17853..18098)
                     /locus_tag="PXE50_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621736.1"
                     /translation="MTNDGSIIARGSGFTTYALELENDGLKYLVGFVQPNGNAKEFIE
                     PGATIRRSNDQPSIGSVDCDPRKKIHYKFDVHLMNTL"
     gene            complement(18307..18630)
                     /locus_tag="PXE50_000805"
     CDS             complement(18307..18630)
                     /locus_tag="PXE50_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621737.1"
                     /translation="MKNNFGYWLGRKIRAFKEWNHPTFLKYTYIILFLLITYQLRLWL
                     YAVFGAVISLIGIVLLADFMHENNAITQRRNILNELKEIKKLQENDCIKENLTGSHNG
                     TGNGC"
     gene            complement(18643..19137)
                     /locus_tag="PXE50_000806"
     CDS             complement(18643..19137)
                     /locus_tag="PXE50_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDL5621738.1"
                     /translation="MLSGLKIESFSKEFKRDCFDSESELLNQYLKTQVSQDIKRRITS
                     CFLAVNSEQTVVGYYTLASTSLSLSDLPITLQRKLPRYPTVPAVLLGRLAVDKRVKGL
                     GLGQALLGNALKRVLRADIAAYALIVEAKDESAVNFYRKFGFIDFENEARKLFFPLDR
                     VRLS"
     gene            complement(19137..19409)
                     /locus_tag="PXE50_000807"
     CDS             complement(19137..19409)
                     /locus_tag="PXE50_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="HDL5621739.1"
                     /translation="MATATARFEARMSQEVHMLLKRAASLEGRSLSDFVVGAALSAAR
                     KTVEQNDIIRLSVNDQELFAKALIDPPEPNLAMQKALALSSQILGE"
     gene            complement(19568..19996)
                     /locus_tag="PXE50_000808"
     CDS             complement(19568..19996)
                     /locus_tag="PXE50_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621740.1"
                     /translation="MRKLLVITALTLCTTPVFAADKNVIFSCTSTEGKPLTVKRVGND
                     YEYSYDKTTFKNPIKKAVTNDGSIIARGSGFTTYALELENDGLKYLVGFVQPNGNAKE
                     FIEPGATISQSKEQPSIGSVDCDTRKKSHYKFDVHLMNTL"
     gene            complement(20017..22023)
                     /locus_tag="PXE50_000809"
     CDS             complement(20017..22023)
                     /locus_tag="PXE50_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrating conjugative element protein"
                     /protein_id="HDL5621741.1"
                     /translation="MKSQFKFKKTHLLVITVLFSSTSSISFADSITDKLEFSKSDSII
                     SDRVFYQIGGGTGYMAPPSRGNTKVVDLGIGWKANLTCGNFDIKTTIKNDLNGLKDGF
                     KDLMGNVIDSAKGAVASMPAMILQRANPQLYDLLTNGMYQGKLDFNRLKTSCEEMSKV
                     LADHTLGGKWGQAADLESYKQITSTQPDAKQAQKDLEDKKGKDGRVWVGGQRKGGQNQ
                     DPINVVGDVAKGGFNLLNKRNVLDSSPVSNCEGNLCQTWDTPQAAADFLTKIIGEQSI
                     STCKEDCGTKTSSKAGVGLSPEIEEEHIRTIVKLENVLNMDVPKSELLAELSSSSVPV
                     TRGLIESLRDDPDVELLSQRLSAEIATSKVMEKMLLARRAILAGMREPNVAQNADAQV
                     ELERVLNIIDREISQVKLEMDMQKMITGNTASVILQSKSEREALAGAHSLSQDSLDKR
                     VQGLENGNVALTDLETGSNINLSRRNIALSIPNIPNVAALIPTLPNRGGSGVGGNFPS
                     LAQISGSTMDQATGLLRNFEGFISKAQWDVNAHRVGYGSDTITRADGTVVKVTKDTVI
                     TKEDAERDLARRTAIFANNVRQELGDSHWNALPANAQAVLVSYAYNYGSLAKTKSVLD
                     AARRSAQTGDMTALATAVRNRQVDNNGINARRRNQEADYILGKN"
     gene            complement(22038..22979)
                     /locus_tag="PXE50_000810"
     CDS             complement(22038..22979)
                     /locus_tag="PXE50_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03756 family integrating conjugative element
                     protein"
                     /protein_id="HDL5621742.1"
                     /translation="MKRAFFSVLLSVSLAVPTTLYPQQVKASLNTASIAASSASTSCL
                     DYKVVGTCFWLFCTYFGCKVRTSTKIKHYLPEMVVSSYNQDGQTPWTELQSLNPGVKG
                     GEYRSPQRQYSQLTFKNADAFGHPQGAIGQLLGSTGYYCKSQTTPFIPYFLSGLDFFA
                     WRENMPEMFYPEALIPGMREVGRVGDSWGNIYPRSGWVTQAHDYKASATIVQRVADIV
                     TRTAQPHIYFPAAKKGGVGEWPPGPVEEGQARTHKWQMLYPQMSNTCSVFPNGGQTDT
                     YSSQISNQGDYAWALWRPYSCCKRRGQTFLYSIDWSH"
     gene            complement(22976..23419)
                     /locus_tag="PXE50_000811"
     CDS             complement(22976..23419)
                     /locus_tag="PXE50_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03757 family integrating conjugative element
                     protein"
                     /protein_id="HDL5621743.1"
                     /translation="MKASRFLGYFSIVTVVFSVVAQAQPNIIVYTTKMYPIQNSQLAS
                     QVYYLDQVENFEEEISRNLSKSPEIAEREIRAFFNSADWKAQEEQLKDAYQGVISGWQ
                     NGIKKVPAVFFNNLQSSPSVIYGMTDIQKALDEWHKWVQQHGESK"
     gene            23794..24147
                     /locus_tag="PXE50_000812"
     CDS             23794..24147
                     /locus_tag="PXE50_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621744.1"
                     /translation="MSQQTAGWDVIPFESSKTAKPSLFWKLGNKLGNIFVSAKHKAKS
                     KYVEVTKGINQRIAEEDEMRALELQMCLDEQAAEYEQEISRIKRKMFFRALFVAIIAF
                     LCGMATVFGTQLSLI"
     gene            24219..24464
                     /locus_tag="PXE50_000813"
     CDS             24219..24464
                     /locus_tag="PXE50_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL5621745.1"
                     /translation="MSVHIKLSCVGDILPIKLNEWTPEHRALHHEISHKALEAWQNRD
                     KGTQSVRFMQQMPARQGLHFRFLSVSEQDGKLIVSRS"
     gene            24473..24715
                     /locus_tag="PXE50_000814"
     CDS             24473..24715
                     /locus_tag="PXE50_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621746.1"
                     /translation="MFGKLFYKMNPKVLAKIGEDFRKAGYLMGAGFVGMVISNDQIST
                     SEGFVLFLWGLYIWIIGHIALHHSEKILNSKQGEPK"
     gene            24979..25821
                     /locus_tag="PXE50_000815"
     CDS             24979..25821
                     /locus_tag="PXE50_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621747.1"
                     /translation="MSDSVLNTYFKHALVKAGFPDTLDMEYSLSHCQGDGVAFYGRLG
                     TDDLIQLFNHLNPQKRKQKMFANLLTHIESWETHDDIGFEIIRNRFGYRYSHWNTMEL
                     YAKTADQLVFFNDSDARRNWYFPTSKVDKYKALWDGFIEDLEQYIKDISREMESVGYQ
                     IIEASPYQTETVFKFNTEKYLVELQRKPSEFYSELVDWAFGDMCDFEAAIEQICQGQL
                     CYADFEATVTDKKSEIQLGLARLSGISYSPNDRSFSGYRQELIGEAIASARHNAARFA
                     YLHA"
     gene            25936..26349
                     /locus_tag="PXE50_000816"
     CDS             25936..26349
                     /locus_tag="PXE50_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL5621748.1"
                     /translation="MKNEHNLEQLKYIWDNRNLENKVYQYLFHICIEPMKKGDWNRYT
                     IWLNFHGNLINVSDVVYRVVESQKLKDDIKIWYDKQYYCRPTKVETTGFISIFLHLFY
                     EGIARILLEQGMITETEAAEKSYNFRAANCFQRLL"
     gene            26363..26518
                     /locus_tag="PXE50_000817"
     CDS             26363..26518
                     /locus_tag="PXE50_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621749.1"
                     /translation="MEPRTVKVIYDDGDYFFTLINADEQTIRNYYAIGSSIGFDNTRK
                     IVAVEIL"
     gene            26598..27581
                     /locus_tag="PXE50_000818"
     CDS             26598..27581
                     /locus_tag="PXE50_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1738 domain-containing protein"
                     /protein_id="HDL5621750.1"
                     /translation="MNPQSNTQPKFDLYQEVTDKIIAALEQGTAPWLKPWDSVIPYGG
                     MPCNAISGRLYSGINVLLLWLSAAEHGYIQRKWITAKAAIEAGGHVRKGEKATLAVSY
                     RPYDREKTDDDGNLVLDDDGNPVIEHLASIKKHCLFNIEQCEKLPQDWYETVETPEQL
                     TDENQYAIFEEIRLMLKGMDLQVMVKPSNQAYYHPRNDHIVMPEMKQFHSPQKFHSVL
                     LHEMTHATGHQSRLARDGIVSGKARFGNKVYAFEELVAEMGCAFLCSHLGFADVPQNA
                     SYIESWIKVLREDKRAIFRASGKAREACQYMLDALNIAQLADKYEVFEEAA"
BASE COUNT         8505 a         5519 c         5721 g         8546 t
ORIGIN      
        1 taatattgca gtttgtgagc ctatgatttt agcagcagct caaaaactat gtaaattact
       61 taacaaacaa tcagccttac ctcaaaatta attttatctc ccaatcaaca atagaataaa
      121 tcattcaaaa tcagcaatga cttcgccata gttggcttag attcctttca cacttggaga
      181 gattaaatga aaacaaaaat atccttaatt gctgttttta tgcttggttt aagtggttgt
      241 gttcatcaac aaaatactgc tcaaaacagt gatgaaatca cacctatgcc tgattcatta
      301 ctaaaacctc aaatgcaacc attacctcca caagaccgta tcgtgtccaa agatatctac
      361 cacgaacaaa ctacctcgaa taccgaagta gtacgtgacg gacgttacac cttaatcagt
      421 attgctcctg aggaaggaca aaaatatctg cttgaacaag tggtatcggt aaaagtgcct
      481 aatactaaaa atagattcac agccaatgtt cagcaaggcc tccgtacaac attaaccaat
      541 acagggttag aactgtgctt tccaccaata ggtgaacagg gcaatgcagt tcaaacgctt
      601 tttactcgcc cacttccgaa agtccattac caattcggtc cgatgaaatt atatgaagct
      661 ctacaaatga tcgcgggacc ggcttatgaa ttaacactta atgatattac tcgtacgatt
      721 tgctttaaag ctcgggaaag ctcattccaa aatcctcata agcctgctgt tgctattcaa
      781 cggcaacaat taaaaccgag gtcattgagg aataattgag ggaaactcca atgaaacgaa
      841 atactatcaa tatatggtta gccgtactct cttcagtgac tacaaatgct cttgctcaaa
      901 ctacatcaat agaaagtagc acacagacct tatcgcaaca gcaaagccaa catcaacaat
      961 cacaattaag tgatagccta aaacaggcaa aagagtgggg attaaccatt gaagaatgga
     1021 atcgctacac cgaattaatg aaaggtgagc gtggtatgtg gtcgccaaac ttagatcctc
     1081 ttacagcatt aggtattgaa gcaagaactg ctgaggagag agaaaaatat gctcgtatgt
     1141 tagcaaaaaa atactatgaa cgtgtgtcca aagaactgga ttttgacaaa gtctatcgtc
     1201 aggagtttga gaaactgtat ccaaatgaac ttccttttga agtagaacca cacatttcac
     1261 aatccatagg tcgagtgatt tattttacac gttttgataa ttgcgattct tgtaaaagtg
     1321 atctcagtaa aatcctctct tatgccaata gccaaacacc gcttgatatc tatattgtag
     1381 ggcaaaacat ttctgataat gatatccgca aatgggctgc tgagaataat attgatccga
     1441 ttaaagtgag taagaaactg attacactta atcatgataa gggttattgg ttccaatatt
     1501 cattaggtaa aatgccggca gcgtatcaaa taaaacagga tggtgaatgg caatctctcg
     1561 tttattaatc gttatcacgc tatttgcggt cgggataagt gatgctaagt caaaaccttt
     1621 taccggattt ggtacagaaa ttgatagcta tatccgtata gcagctcagc gttatcaaat
     1681 tagcgaaccg atgctaagag ggctaataaa aatggaagat ggttggtatg gcaatatctc
     1741 acctactggt gccacaggtg tagggcaatt tactgtggga acgtggaatt ggctatctga
     1801 aacagaacgt ggtaagcagc ttggtatgcg tttaattacc ggtaagaata aaggtactta
     1861 tgctgatcct cgcagagata aatacaccaa tacgttagca acagcgttat tagctcgatg
     1921 gcatattgaa caattccatt tacgtcgcat tccggcaaca gatgaaaatt tatatatggc
     1981 tcataacatt ggtttagata gtctgcatcg agcaatgatg ggaaaagcta ccaaagaaga
     2041 tatcttaaat atgcgtcgca atggaatgaa aagttggatg acagtaagag atttcctcaa
     2101 ttatcaaaaa ggacgctttt tagcacataa acaagaagcc aattttatgt tggtctcaaa
     2161 acaggggcat attcatactg gtgtttccgc ctttgtttat cctacaagtg aaatgggaaa
     2221 atcagtaaag tgggttgagc cagacaacaa aataatttgg gttgaaccta aaagtgcaat
     2281 gatttgggta gaacctacaa atacgccata gaggtaaaaa tgcaacataa gataaaaatg
     2341 ctattgctca gtttatgtat atctcattcc gtttggggcg atttaacggt aatcgctgat
     2401 ttcggcggtg aaagtgcggt acgtttttac gaagctttac aaccggaaca cgatgagaat
     2461 gcaccgaact atccgaattc tattccagct tcggttagcg aagctgatat tctacctgta
     2521 gtctctcata aactgtctcc tggtattatt gaaacaaaac aatttgattt aacaggaata
     2581 caagcgattt ttttaattgg agcagataat acctcagctc aatggttaca gcagaatcga
     2641 gaaaagttga tcacgttaaa tgccactggg cttgttgtga atgtccgaac attagcagag
     2701 ctgaatcaat tacgagaaat tgtgccagaa ataataatgc taccaatccc cggagacgac
     2761 cttgcagaac gaattggtat cgcacattac cctgccctga ttactgaaac cggagtttca
     2821 caataatgtc agctaaacat accttggagg cgtggttacg ccctcctgtt gagttttttc
     2881 cggcaattgt tcatgcttct tgtgcttttg tcagtgctgc tgcgccttgg tctctagcac
     2941 tccatccaag tatcggctat agtattgcag ccggtttcgg tgcgttgagt ttttatcgag
     3001 caaaacaagg atggcaaatt gttcgttacc atcaaaatct gaaacgttta ccgaattatt
     3061 caatgacgag taaacaaatt ccggtcagta ataagtatct atttgtcggc aagggatttg
     3121 aatggaaacc tattcacact caacggctac acgattgttt ttcggataac ggttcaaaat
     3181 atctggagcc ttctaagcta tttaaaatgg ctcgtgagta tgaaaaacgc cacgaaaatt
     3241 ggctaacacg tcttacctca aaggatagcc ggtggaatcc ggttagacct ctgccaccgg
     3301 ttgagggtat tcctgctatc catggaattg agccggatga agttgatgtc gttcaatccg
     3361 ttagctctcg ggttgggcat acggtagtat tcggtacaac acgtgtcggt aaaactcgtt
     3421 tagctgaggt ctttgttacc caggatatcc accgaggcaa aacaccggat gagcgtgagg
     3481 ttgttgtctt tttcgatccg aaaggcgatg ccgatatgct caaacgaatg tatgcagaag
     3541 caaagcgagc tggaagagaa gatgagtttt atgttttcca tttgggatat cctgaaattt
     3601 cggctcgcta taacccagtg ggacgtttta atcgtatatc agaagtcgct ggacgtattt
     3661 caggacaact cagtggagcc ggtaactcag cggcatttaa agagtttgct tggcgatttg
     3721 tcaatatagt tgcacgtgca ttagttgaat taggaaatcg tccaaactat gttcagattt
     3781 cccaatttgt acaaaacatt gattcattat tccttgatta tgcggaaaaa tttattcgta
     3841 aaactgaccc taaaatttgg gaaaatttag cgacaatagc cgcaggatta gatgagaaag
     3901 ctcttccttt tggaatgaaa gatcgccctc taatttttgt gatcaacaaa tatatcgctg
     3961 aaagtgcagt gtttgacccg attttacaag gactcgccag tgccgtgcgg tatgaccgta
     4021 cctattttga taaaattgtt gcttcgttat tgccgttatt ggagaaatta acgaccggaa
     4081 aaatttccga acttttatct ccggattatg ccgatatttt ggatgaacgc cctatttttg
     4141 actgggaatc cattatccgt aaacgaggaa ttgtttatat tggtttggat gctctctccg
     4201 atgctacagt tgctgccgca gtcggaaaca gtatgtttgc ggatttagta tcaatggcag
     4261 gtcatttgta taaatttggg acaaatgagg gattgccggg tgacatgggc agaaaaacca
     4321 aactggtgaa aatcaatctt cattgtgatg aattcaatga attgatgggc gatgaattta
     4381 tccctctcat caacaaaggt ggtggtgccg gagtacaagt tactgcttat acgcaaacgc
     4441 tctccgatat tgaagcccgt attggcagta aaccgaaagc gggacaaacc ttaggtaact
     4501 ttaataccct atatatgctc agggtaaaag aacccgctac ggcagaattg cttacaaaac
     4561 agttacacga agtgacgatt aagcgtagca cggtcacgtc cagtacgact gactccagta
     4621 acccggatga tgacaaggca tttagctcaa atacagggca gcggattagt gaaagtactg
     4681 ttcctatgct ggttcctgcc aacattacca atttaccaaa aggacaagca ttcgctttac
     4741 tggatggtag taaattatgg aaaattcgga tgccgttacc ggctgtcgat aaagatgata
     4801 tgatgcctca atctctacga gagctgacag attatatgcg taaaaactat cacgttgtcg
     4861 aaaattggtg gcaaccagca tttacagaat atacgccgtc ccgagatatt gcagaagctt
     4921 ttgaagcgat gtcagagcct caatataact cacggataga caatcaggtc gataatttcg
     4981 gcatagatga accctatgat attgatgaag aggaaaatga cgatgagtag taccaaaatg
     5041 agagaagaaa atagaaccaa cctcttagat ttacccaata aataccgtaa ttttgatggc
     5101 gagttttcag cttcttgtgg actagacaat gccgaagagc tccttattca tagccaatcc
     5161 tattttatcg agtggtttca acaaggctac tctttccatc aatttgctga aaaatttgca
     5221 catcaaggac tttcattatg gtctgctgat gaaatatcta tgcgtaatac tgataaatct
     5281 aaagatgttt tcgcttttta tcttgcattt gatcataatc cttctggcta tattcttgtt
     5341 caatgtcagc tcgatcggga ggatagtctg caatgagtga aggagctaaa cctcgtcgaa
     5401 aatcaggttt aatcagcctg attttgggaa aaataaatat gttgcttgct gcaattacag
     5461 tatctctcat attcagcatt attttagagt gggtaggaat tgcgttttgg tggccggaag
     5521 aaggacactt gcatagccaa acgatgatgc tcaatgagat gcaatggcta tcagatgatt
     5581 tctctcaaag cctgtttgcc aaatcttcta ctgcttttgc aacattgatt atcgaaaatg
     5641 tctataattg gttatttgtt tatacgggta ttaaggagtg gctaacttca ccgggtaacg
     5701 gtagtatgga acagtgggca tatcactatg gtagagccta tattgagtct gttatttatg
     5761 tcgtgatcac ctttattatt cgcctcatta ttattatttt taccagtccc ctctttctat
     5821 tgaccgcact ttctggttta accgaaggat tatcattacg ggatattcga aaatttggtg
     5881 ccgggcggga atcagcctac ctataccacc acgctagacg ttatattatg ccgatgatgg
     5941 taacagcttg ggtagtttat ttgtctatcc cgttttcgat tcaccctaac ttcattttag
     6001 tccctgctgc ctgtttattt ggtttgtcca tctgtataac tgcagcgagc ttcaagaaat
     6061 tcttgtaaag ataataagcc tcagtaatat actggggcta ttcgtctgtt atagtgtttg
     6121 tcccttcatt ttctgtttca atatcccaat catctccatc ccaatcttcg acttcccagt
     6181 attgtggata ttcatcctct tcggtctctc gttcagagct ataccaaaga ggcaattccc
     6241 catattcatc caattgtgac tctatgcgtt ttctctcgtc atcacccaga aattgccaat
     6301 aattacagac taaatttccc ctcaaactta attcccaaag accaccgtaa ttatatgggg
     6361 cattttctgc atggcagata tctcccactt tatgtgcctg cggaagaggg taagcaattg
     6421 atgggagaaa tacagggaat agagctaaat atctcatctg gtatctcatg gtaaagcgtg
     6481 aatactcaac tttaatacta acttattaag taacactgac acagttgaat atctttctaa
     6541 ccatttaata ttttgtgcaa tttctcttct gattggtaac agagttttcc attaaatttt
     6601 aggatcgctt ttggcactct taacttgaag taaaactaaa aatagaggtg cactatgtct
     6661 atttcaacat ctttaaggaa aggtattgtt gttcttgtta ccttatcttg cttgccggca
     6721 tttgcttcaa cagaacaaga gcaattagct caggcaatta agcaactgga agcggctaaa
     6781 ttatcactcc aacgagcaga aaaagtggct aaagcctcgc ctaaaacacg agaatacttc
     6841 aactattctg ccattcaccg tgatattgaa accgtcaaaa agggaattca acaatatatc
     6901 aacccaagca gagcattacc tcgtgatccg aacgtactac gtactttaag tgaagattac
     6961 agcaaactac gggggcaatg atgtcctatt cccctgttga tgcattttct gcagcgagtg
     7021 gtatcgatcc tttcagattg aaactcatga tagctattat tttcctttca atgctgttac
     7081 tagcagtcgc ttgggcctta aatagtggct ataaggggtt ttcatttaga gataaaagtc
     7141 ctttttcact tttagtttta tttctcaaag gagtagcact attagtttgt gttacttatt
     7201 tctttatcta ttagattcga ggtctattat gagccgtatt aaatctctta cgaaacatct
     7261 gcatagtcgt tatttagctg taatgctcgt attctgggga actatccaac atgcgtttgc
     7321 agccggtccg gatgcatcca aaatcccaga cttccaaatt ccaggcgtgg atagtaatac
     7381 taaagatcca atggaaattc tttggattgt aggtaaaagt atcattacct tatttgcggt
     7441 attacttgcc gccggtgcca tttttgttgt cgttaaagcc ttgatcagta tctataacga
     7501 agcaacttct gaaaacggca agaaaggctg gggacacttt attgttgctt taattatcgg
     7561 ctttattgtg attttcttct gcttgtggtt agtcaaactt gcagtcggac tcttctaatt
     7621 aaaatgtcta ggagaccaat atgccagaac aagatacaac cattcctttt ttgcctactc
     7681 gcctcaatcg agaggctacc gtttacggcg gtatgacagt gagcgaattc ggcatatctg
     7741 ctggattggg atttatgtta ggtctgattg ttggtctctt cttgtggata ttaactgatt
     7801 tttggcttct tattccggca atggcaatgt tgctctgtat cgcaaccgtt ttaattggga
     7861 aaggtgttgt agccgctgtt aagcgaggaa agcccgaagc ctacttaaat aggttaattg
     7921 aaaagaaaat ggatgacctc tttaacggtc ataagtttat aagacgagaa gggttttggt
     7981 ctattcgccg atataaaagg aaataacaaa tgagccagtt aaaaagccaa ttacacgaaa
     8041 aagataaaca tatcaaaacg actcgaattt ttgccttcct gtttttcatt attattttgg
     8101 tgctcgcagg cgtgatctac acattcccaa gtcgccttac gatatacaac ccaccagatc
     8161 tacgagcagg gagccaacga gcttggtggg aaattcctaa accaacaatt tatgcatttt
     8221 cttatcaaat tttccagcaa atgaatcgtt ggatgacaaa tggcgaagag gattacgaga
     8281 agaatattac cgccctcaaa ccatttttaa caccacactg tgaagcattt ttacgacaag
     8341 attataaaga tcgtctccgt aacaatgaac tacgtagccg aactcgtatg gtatatgaaa
     8401 ttaccggtcg aggctacagt gaagataaag tgaccgtatt tagcgaagac aattgggccg
     8461 tcaatcttga tttaagcgta gatgaacatt tccaaggaca accggtaaaa cgagtctata
     8521 tacgttttcc tatcagtatt gtgagaatgg atatcgattc agtcaaaaat ccttggggat
     8581 tagggtttaa ctgctatcac tccattccaa aactcttaga gggcgttgag ccaaaaacag
     8641 aggagaaaaa ataatgaaac gtctaccaat tttattcgct tctttactaa taagcttctc
     8701 tgggagtagc tttgctgatg tcttgatgaa atgggaaaga aaacccttgc ctattgcatt
     8761 gcaagtggaa aaagaacgaa tcatttttgt cgataaaaat gtcaaagttg gctatccggc
     8821 tgaattagat ggcaaattac gcattcaatc aacgggtggc gcagtgtact taaaagccct
     8881 agagacattc ccttctaccc gtattgaatt tcgtgatgtt tctacaggtg aaattttcct
     8941 ctttgatatt gtttctgcaa ccaaagtagc taatccggaa gaatcaatac gaatggtatt
     9001 tgatagtgcg gtagaaaaac aatctttttc aacgaataga gatgatgaac ctgatctatc
     9061 tttgaccggc acacgaccac aattaccgat accggcagca ttaacccgtt atgccgcaca
     9121 atcactttat gcgccactgc gtgcagttga gcctttagaa ggagttcgtc gtgtagcaca
     9181 tcgacttccg aaaaaaatta ccacattgct ccctgcgtat tcgatagagg caacaccttt
     9241 aatcagctgg caattggacg aatatgtagt cacggctatt cgtctacaaa acaaaggtaa
     9301 tagtcaaatt acactcgatc ctcgagaact tcaaggacaa ttttatgctg caactttcca
     9361 gcataattgg cttggaggat atggagggaa tgaagatacc acaaccctgt atttagtgac
     9421 ggaaggctat gctaataatg cgcttattcc ggaaactcac cctgttaaac ccgtcggtaa
     9481 gaaagtgaaa aaaacaacaa aagttgaaac taaaccgact caatcggcga agtaggagga
     9541 gaagctatga aagcgaataa agccttgttt gtcatattgg ggattgtgtt taccctagtc
     9601 ggtgggattg tctatgcctt attttggcga agtgatacac cccaagaacc aacagagcag
     9661 gaaattttag atatttccat taaagattta acaccggaac aagtcagatc aatgggcatt
     9721 caaggtgata cgccgattga tactctgcgt actcttgtga caaccgttaa atccaatgag
     9781 cgtcgtatgg atgaattaat cgatgaaaac cgacaactca agcagaaaga agatttagtg
     9841 aatggtcgta tcagtgatgc agtgaataat gaaactcgca aactacaaga gcagattgca
     9901 gatttgaaaa tgcagttatt tgatatggca acacatgtta ataacaaatc gacagcacaa
     9961 gaatcaactc ctcaagcaga agctcagcct agtatgacaa cgaataaagg atttggtact
    10021 gccggagata aattacctat cggtggtgct tctatgccta atgtggatat tggaggaatg
    10081 tactgggtag agccaagcga tcaaattgga ttggatgcag gtggaaaagc tgtatcaggt
    10141 aatacacttg caactaagtt tggattcccg aatgatttta aaggtggaca aactactgga
    10201 aataccgaaa agaaaggtct gccgtttttc ccggaaactg atgtagtgac aggctcgcaa
    10261 ggaacaacag gaaattctcg tggtaaaaac cagattacgc cggtttacac cgtaccaagt
    10321 aattccacat tccttgattc agttgcaatg acagggctta ttgggcgtat cccgattgat
    10381 aataaagtct ctgatgctta tccatttaaa gtactgattg gtcgtgagaa tctcattgcc
    10441 aatggtattg aattacttga tgtagaaggt gcgattgttt cgggtacagc tactggcgac
    10501 tggactctat cttgtgtacg aggcgatgta aaaagtatga cctttgtgtt caatgatggg
    10561 cgtattgtca gcacgactaa caaagggaat agtgagaata tcggttggtt atctgatagt
    10621 tcaggcattc cttgtgttcc cggggagaga aaaacaaatg caccagaata tttaggcaca
    10681 aatttcttct tagcggctgc cagtgccgca gcccaagggt tttcacaatc acaaacaacg
    10741 acagtagttg atggcaatag tgttgttgga gctgttaccg gtgatcaagg taagttcatc
    10801 ttagggcaag ccatcggcgg tggtttaaaa gaatccgccg actggtttag aaagcgtttt
    10861 gctgaaaact ttgatgctgt ctatgtacca cctggacatc gtgtcgctat tcatatcgag
    10921 aaagagattg agatcgatta caactccaaa ggacgtaaag tgaaatacgg aaacacatca
    10981 actaatacac aacttgatta aaaggaacaa acaatgaaag ctttatattg cataatgatg
    11041 agtgccttat tgataacagg ttgcacaact tcaactgaag aattattacc cgctaacggc
    11101 agtacgatgc gagatatttg ggataaagga gcaggtaata acgatctaca cttataccgt
    11161 tcacaacaag gacgaacact cgatcctgtc gattatattc ctaacactga gcaacgagcc
    11221 tatacccgta cggcagaaaa tgaaattaat aacttgttcc ctcgtttacc taatccggat
    11281 ctgattatgt atgtgtatcc acaccaaact cgttccggag agcctcttag tattccagga
    11341 tattctacgg tattaccttt ctacgggcga gtccaatatg ctcaaccggg tgatcgaaca
    11401 agagggcttt gatgatgtct tttttaagtg aggtattttc ctctttcaaa ccgactaaga
    11461 cagaggttat atcaagtgaa ccaaatgaaa attcaggtga gtctgacatc attcaaaata
    11521 aaatgagtga ggtaaatggc gaggttcaac cattaaaacg cagtggaaaa ctcaccctgt
    11581 cacagcatca ccgtcggtta tactcacaag ccccctcttt tattgatcat ctaccttggg
    11641 gagaatattt gaatcaacac ggtgtgatac tcctcgatga tgctcgtagt gtcggggcgg
    11701 tatttgatat caagccgatt ggtacagcag gacgtagtat tgagttttta agcaggatac
    11761 gaaatcttgt caaagatgcc ttacaagata gctttgatga gctggatata aatccttacg
    11821 tcgtgcaatt ttattgccaa gatagcgatg atttacagcc ttatattgat cagctacgga
    11881 attatatctc gcctattgcc caaaatagtg catttagcga agaatggtta cgagtacaag
    11941 ccaagcattt caaggatatt ggtaaaccag aagggctttt tattgatgac agagtgacaa
    12001 atacagcttg gtctggacgt attcggagta ccaaaatggt gatttatcga tatgtagata
    12061 agtccaatga ttccaatgaa aatcttatta ttgagcagct taataatgct tgttcccgaa
    12121 tcaatggggc tctaacaacg gctggattac agttacagcg gctagatggt gaacaaattc
    12181 gccaatggtt attgcgttgg tttaatccta atccatctat taattttgag ggattaagca
    12241 acaatgattg ttaccatctt tttggcaaac aaacctcaaa tgatgatctt ccattagctt
    12301 ttactgattt cagtgaggat ttattttatt cacagccgag aaatgaaggt agctattggt
    12361 attttgacgg acagccacac gaggttgttg tcgtcaataa tttaagaaaa caaccagaag
    12421 tgggcttaat gaccggcgag attactcgtg ggcgtaatat taatgcgtta tttgacctat
    12481 tgccagaatc aaccatcatg gcaattacca tcgtcatcca tcctcaggat aagttggaag
    12541 cacatttaga aaaaatcagt agtcgagcag tgggtgagaa ttttgagtca aaatacctaa
    12601 aagaagactg tcaaactgta caggcttatc ttaaagaggg tcataaactc tatcaagcag
    12661 ctattgcatt ttacgttcga ggtaaggacg aaaaggaatt gcgtactcga tctcgccaac
    12721 taagaacaat tctgctcagt aacaatttag agccggtaaa ggaaaacgca gaaattgctc
    12781 ctcttaatag ttacctacgt tggctaccaa tgaattttaa tccgcagatg gatgccaaat
    12841 cccattacta cacgaagtac tattttgtac aacatttggc aaacttattg cctatctttg
    12901 gtcgagatac aggcactggt aatccgggga ttacttactt taatcgagga ggagctccgt
    12961 ttaatttcga tccgtttaac cgtaaagaca gaaccaaaaa cgctcacaaa ctcttattag
    13021 gaccaacagg ctcaggaaaa tcagcaacac tatgtgggca attatgtcag gctatggccg
    13081 tttatcgtcc tcggacgttt gttgtggagg caggaaattc atttggttta ttagcggact
    13141 atgcagaacg ttttggactg accgtaaatc gcattacgtt agccccaaac agtggcattg
    13201 tcttaccgct cttttcagaa gcccatcggt tattggatat ggaattaaat ccggaagatg
    13261 tgccggaaga cattgaggat aacgatgaca ctgatgatga aggcgatatg caacgagatt
    13321 tgttggccga aatggagctg acagcacgtt taatgatcac tggtggcgaa aagaaagaag
    13381 atgaaaaaat gagccgtgct gacagagcag ccattcgacg tgccatttta aatgcggctc
    13441 gccaaactaa atccgaaggc agacaaacgc taactgaaga tgtgaaaaag gcattggagg
    13501 ctataagccg tgatgaaaat actcgtgaag aacggcgtac tcgtttggcc gaaatggcag
    13561 aatcattgga aatgttctgt accggagtca atggacaatt tttcaaccgg gaaggcgaaa
    13621 tttggccgga agcagatctg acattggttg atctagccat gtttgcccgg gaaggttatg
    13681 aagcagaatt ggccatttcc tatatttcac tcattaacca tatcaacagt ctcggtgaaa
    13741 aataccagca tagcgacagg atgattctga atgtaaccga tgaatcacac attatcactg
    13801 ccaacccatt attagcgaaa ttcttggtga aaggctcaaa aatgtggcgt aaattaggga
    13861 tttggctgtg gcttgcgaca cagaatatgg atgacttccc caatgaagca gcgaaattgc
    13921 tctcaatggt cgaatggtgg gaactgttga atgtgtctgc tagtgaaatt gatgaaatca
    13981 atcgcttccg gaaactgtcc gaagctcaga aaacgatgtt gttatctgcc aaaaaatcag
    14041 atcgtaaata taccgaaggt gtggtattgg caacaaatat ggaagcgcta ttccgtgttg
    14101 taccaccgag tttatttttg gctttaggaa tgaccgagaa acacgaaaaa gcagaacgtc
    14161 ggcaattaat gatgcaacat ggttattctg aattagatgc tgctttagaa gtcgctgctc
    14221 gtattgataa agcgagggga attgcataat gatgaaacaa cactatcgac tatttaatgt
    14281 cggaccacaa aaatcctcat tagggattgt atcttcggcg gtagaaactc aactgcttgg
    14341 attttgtgaa caaattcgcc aactcatcgg tatcgggaag cagattacct tattccctca
    14401 tcgggtagtg caaaaccact gggctatcga acttagcggc gagaaaggct ctgttcactt
    14461 attactaaat gtgacggggc gttctttact gcctacttcc aattaccgtg aatggcctgc
    14521 tcgtttagtc atcgaaatag ccgatcatgt ggatgcttac tggtttgcaa cattccttgc
    14581 tcagcaattg gatttgaaaa gtaatctttt cttcttatcc acatcaattg tggataactc
    14641 tatgcataac gaggtaacgg atactaatga agcctgatac gacaatgcct aaaatgaaaa
    14701 aggtgagagc tgtattaaaa acaaccttga ttatcatcgg tattatctta ctactactta
    14761 ttgttggttg gctggcaatg acctatttcc ctaccacaaa ttttcaagcg tggttctatg
    14821 aaacccgtta tgcatggttg ggatggcgat ttgtattata tggggttatt tggttcttaa
    14881 tggtaaaact caatcgaaga ggacaaatgc cattgaaagc cagactgatg attttatctg
    14941 ctatccccct tatagaggga attaatttac tgtatctact ttaaggagga tgagatgacc
    15001 tttaccgtag atagctactt agaatacttt ttgaccttac tagcttggat cattaacaat
    15061 aatatttttg ctgtactggt tcaaaccggt ctattcatac taccgctgat ttttgtttta
    15121 atcggcacat ggatggaagt taaaaagcaa ggggaggacg aaggtaataa aggagattta
    15181 cttattactt ggctcagcct taaattttat ccggcgatgt ttgttgtagt gttagttttg
    15241 gccccgatga tacctatcaa ccttaacaat attgagctga atgttgaacg ttccaaagcc
    15301 tgtggctacc gtattccaac ctcaccagag gatagtggtt ataatcaaat gaactctgaa
    15361 ttgggcaacc agcaagcgag agtaccgctt tggtggggat tattccatca aatcaacaaa
    15421 ggagttacac acgcattaac agcttcaatt ccgtgtaaac cggatttacg tcaagttcgc
    15481 tttgaggtcc aacatgaaaa aatcaataat cctgcattat tgactgaggt tcgcttattt
    15541 gtacaacaat gttatgtacc tgcacgtcag aaaattcaaa gcagtcagct ctcattgact
    15601 ccggcacagg tgcgtgaaac cagctggtta ggtggtcgta ttcttttgac aaacagtgag
    15661 ctttatcccc gttatcgagc tcaacaacct catagtctat ttccctacaa tgcttcccgg
    15721 gataatggat tgccgaataa tggggaaggt ggttttccaa attgtgcaga gtggtgggat
    15781 acggcgaata ctggtttaaa agatcgttta ttagctgatg tcaaacagaa cttctctgca
    15841 aaagtgattg atttttttag cagcaaagaa aatgcggatg aatccatact ccgtactgta
    15901 ttacgagcag agaatatgga tatttcgaga gggaaagttt atcccgggta tggggggaat
    15961 ttagatccta catttgcaaa tgcaacgact cgattaacat cttcagtggg aagcttagct
    16021 gccagctttg cagcctttcc agcattcgat gcaatgcgac aagcactgcc gatggtacat
    16081 gcttttatgt tgatggctgt gatcatcatt actccgctgg ttattgtgat gagtggttat
    16141 tctctcaaaa cattagttac attaactttt gtgagttttg ctttggtatc actgacattc
    16201 tggtgggaat tagcaagatg gttagattct tggctactat ccgctctata tgattccagt
    16261 gcacatagtc gaataaatcc gtatttcctt gaaaatacgc aagatgattt tatcgtcaat
    16321 tttgtgatgg gttcgatgtt cttggtttta ccggcgattt ggctaggcag tatgtcgtgg
    16381 gctggagtaa aaataggaga tatagctgcc ggttttacta ctgattcatt agatagtaaa
    16441 tccgcaggct ctcaaggtgg taatttagtt aagaaaggcg gtaaggaaat atctgcaggg
    16501 tttaacaaat aaaacaataa ggtagaggtt aatctctacc ttattaattt ctaatcatat
    16561 tttctcatct ttttacaaaa tagccaccct gatagagtcc atatccaaaa tatccatcac
    16621 gatatccatc aagctgattt tcgtcttgat cagcaattac atcccataaa tcttccggct
    16681 tactatcctc actatcatct tcaatttcat taaccgtgtt ttcgacgtgg tttggattat
    16741 atgctacgtc atttgttgaa atatcttcta ctggtgttcc attgagaatt cgcagaaccg
    16801 tgaatccaac taaaaacaag ggaagtcctg caaaaatcac cgcaaaaacg acagcttgtt
    16861 gtagcggttt tggtaaaaat gcggtacgtt gtttgataaa tttaaccggc ttagcgagct
    16921 gctttccgaa atcgataaat ttcatagtat ctttcctaag ataaaaggtt attgtttttg
    16981 gcgactacta taaattactt tatctttatt gtcttttaca gaataagata aaacttttcc
    17041 tgttaaatta tctaatcctt ctgctttttc aaattgtaca tcaacataca atataacaga
    17101 gcgatttatg tttcccaaag aatttttacg cttctgtaaa aactctttag ctttatcctt
    17161 gcccataggt ataccgtcaa taaactcggg attagaaaca tacagattaa tttttcttgg
    17221 caaattttca gtatattgat tagaagaaat atacatatgc ccattcatca ggggttggta
    17281 ctcaaactta ccttgttcaa aatcataatt cccgaattct gagtttacag gaattgtgaa
    17341 aacaataggg gcttcttcag attttctgtc atccaccagt ttttgtagtt tcttaccagc
    17401 ttgctcaatt ttatcctgaa actcaaactc gtcattttga tatttatgat acgtatttct
    17461 atcgctgtaa agtaaccagt ctttagataa cgaactaagc tcgatattct cactaaaatg
    17521 taatgattcc atcaatatgt tttgatagtt gaagttttta gacactgaga atgctgaagt
    17581 ggatagcagt aatccgaaga ttaagcccca taatgggaaa gcttttttac acatttttat
    17641 ctcctgacac attagagagt ttaaattatg atagatccac ctgataataa agagcaagtc
    17701 ttttaaacaa aaatccctta gattttttaa acctaaggga tttacctacc gagcattgtg
    17761 ttttttaacg tgggtcagct ctgacaccac aattgttcat ctgccgagct ttgtcttttt
    17821 taacttgggc tagctctagc accacaaagg tattataaag tattcatcaa atgaacatca
    17881 aacttataat ggattttttt acgagggtca caatccacag aaccaatact tggttgatca
    17941 ttactacggc gaattgttgc tcccggctca ataaactctt ttgcatttcc atttggttga
    18001 acaaatccga ctagatattt caagccatca ttttccaact ctaaggcata agtagtaaaa
    18061 cctgagcctc tggcgataat cgaaccgtcg ttggtcactg cctttttaat cgggtttttg
    18121 aaagtagttt tgtcatacga atactcgtaa tcatttccta cccgtttaac tgtgagaggt
    18181 ttaccttctg tgctggtaaa agtcggagat atgggaaata gtgtggtgca atataaaatt
    18241 aatactaaaa taaattctta ataaaaaata gctacagttt tattgaaaat tgtagctatt
    18301 tagaatttaa cagccattac cagtaccatt atgggatcct gttaaatttt ctttaataca
    18361 gtcgttttct tgtaattttt tgatttcttt aagttcatta agtatattac gtctttgtgt
    18421 tattgcgtta ttctcatgca taaaatcagc taacagaaca ataccaatta aggatataac
    18481 tgctccgaat acagcatata accatagcct tagctgataa gttattagga gaaataatat
    18541 aatatatgta tatttgagaa aagtgggatg attccattct ttaaaagctc gaattttcct
    18601 gcctaaccaa taaccaaaat tatttttcat aatcactctc cattaagata atctcaccct
    18661 atctagtgga aaaaataatt tcctagcctc attttcaaag tcaataaatc caaatttacg
    18721 ataaaaattg accgcacttt catcttttgc ctcaacaatt aatgcgtaag ctgctatatc
    18781 tgcacgaagt acccttttaa gtgcattacc taatagagct tgccctaacc ctaatccctt
    18841 tacacgctta tctactgcta atcgaccaag taggacggca ggtaccgtag gatatcttgg
    18901 taatttcctc tgtaatgtaa ttggtaaatc agataatgaa agacttgttg aagccagtgt
    18961 gtaatatcct actactgtct gttcagaatt aacagctaaa aaacaagaag taatacgtct
    19021 tttaatatct tgtgaaacct gagttttgag atattgattt aataattcag attcactatc
    19081 aaaacaatct cgtttaaatt ccttgctaaa tgactctatt ttcaatcccg aaagcattat
    19141 tcccccagaa tctgtgagct taatgccaag gctttttgca ttgccaaatt aggttcagga
    19201 ggatcaatca atgctttagc aaaaagttct tggtcattca cagataatcg aataatatca
    19261 ttttgctcaa ctgtttttct tgctgcagat agtgcagctc caacaacaaa atcactaaga
    19321 ctacgccctt caagagaagc ggctcgtttt aacagcatat gaacttcttg gctcattcta
    19381 gcttcaaatc gtgcggttgc agttgccata tattttctcc ttgaattatt tagttttaat
    19441 tgtacgtatt tataccgtac aaatcaagca tgacaataaa aaaatccctt agattttcaa
    19501 acctaaggga tttacctacc gatctttgtg ttttttaacg tgggctggcc ctagtgccat
    19561 acaggcatta taaagtattc atcaaatgaa catcaaactt ataatggctt tttttacgag
    19621 tatcacaatc aacagagccg atacttggtt gttctttact ttggctaatc gttgctcccg
    19681 gctcaataaa ttcttttgca ttgccatttg gctgaacaaa gccgaccaaa tacttcaatc
    19741 catcattttc cagctctaat gcatacgttg taaaacctga acctctggcg ataattgagc
    19801 cgtcattagt gactgccttt ttaatcggat ttttgaaggt tgttttgtca tacgaatatt
    19861 cgtaatcatt tcctacccgt ttaacagtaa gcggttttcc ctccgtgctg gtacaggaaa
    19921 atattacgtt tttatctgct gcaaatactg gggtcgtgca gagtgtaaga gcagtaatta
    19981 ctaataattt acgcataaat gtaactcctt ataaggttaa tttttaccaa gaatataatc
    20041 agcttcctga ttccggcggc gtgcattgat accgttatta tcaacctggc gatttctgac
    20101 agcagttgcc aaagcagtca tatcaccagt ttgagctgat cgtctagctg cgtcaagcac
    20161 actttttgtt ttcgctagtg agccgtaatt atatgcataa gacaccaaaa cagcctgagc
    20221 gttcgccggt aatgcattcc aatgtgaatc acctaactct tgtctcacat tgttcgcaaa
    20281 gatagcagtt ctgcgagcta aatcacgttc agcatcttct ttggtaatca cagtatcctt
    20341 ggtcacttta actacggtac cgtctgcccg tgtaatcgta tcggaaccat atcctacacg
    20401 atgggcattc acatcccatt gagccttgga gataaagcct tcaaaattac gcagtaaccc
    20461 tgttgcctga tccatcgttg aaccgctgat ttgtgcaagt gatgggaaat ttccgcctac
    20521 acctgaacca cctctatttg gtagagtcgg gatgagagct gctacattcg gaatatttgg
    20581 gatactcaat gcaatatttc tacgagagag gttaatatta gagcctgtct ctaaatcagt
    20641 taatgcaaca ttaccgtttt caagtccttg aacacgctta tccagactat cttgggataa
    20701 actatgagca ccagcaagag cttcccgttc ggatttactt tgcagaatca ccgaagccgt
    20761 attgccggtg atcatttttt gcatatccat ttccagtttt acttgggaaa tttcacggtc
    20821 aatgatattg agtactcttt ccagttctac ttgagcatcc gcattttgag caacattcgg
    20881 ctctcgcata ccagctagga ttgctcggcg agccagtagc attttttcca ttactttact
    20941 ggtcgcaatt tcagcggata aacgttggct gagaagttca acatctggat catcacggag
    21001 gctttcaatc aagccacgag tgacaggtac actacttgag cttaattcag ctaatagctc
    21061 ggatttcggc acatccatat tcagtacatt ttctaattta acaattgtac gaatatgttc
    21121 ttcttcaatt tccggactta aaccaacacc ggctttcgaa ctggttttag taccacaatc
    21181 ctccttacag gttgaaattg attgctcacc aataatctta gttaagaagt cggcagcagc
    21241 ttgaggtgta tcccaagtct gacaaagatt accttcacaa tttgaaaccg ggctgctatc
    21301 taagacattc cgcttattga gtaaattaaa tccgcctttc gctacatcac caacgacatt
    21361 aattggatct tggttttgcc cacctttacg ttgcccacca acccaaactc tcccatcttt
    21421 ccctttttta tcttctaggt ctttttgggc ttgcttcgca tcaggttgtg tcgaggtaat
    21481 ttgcttatag ctctctaaat ctgctgcttg cccccatttt cctcctagtg tgtgatctgc
    21541 cagaacttta gacatttcct cacaggaagt ttttagacgg ttgaaatcca gcttaccttg
    21601 gtacatacca tttgtcagca aatcgtagag ttgagggttg gcccgttgca atatcattgc
    21661 aggcatactg gcaaccgcac ctttagctga atcaatgaca ttccccatta aatctttaaa
    21721 gccatcttta aggccgttta aatcattttt aatagttgtt ttaatgtcaa aattgccaca
    21781 ggttaaattc gctttccaac cgatgcctaa atcaacgact ttggtattac cacgactagg
    21841 tggagccata taacctgttc ctccgccgat ttggtaaaag acacgatctg aaataatcga
    21901 atccgactta ctaaattcca gtttatcagt gattgagtca gcaaaagaga tagaggaagt
    21961 actggaaaaa agtactgtta ttactaatag atgtgttttc ttgaatttaa attgtgattt
    22021 cattgcaaga cctcgtttta gtgtgaccaa tcaatactgt aaaggaatgt ttgccctcgg
    22081 cgtttacaac aactataagg tcgccatagt gcccaagcat aatcaccttg atttgaaatc
    22141 tgagaggaat aggtgtctgt ttgcccccca tttggaaaaa cagagcaggt atttgacatt
    22201 tgaggataaa gcatttgcca tttatgtgtt ctggcttgtc cttcttcgac aggtcctggt
    22261 ggccattctc caacaccacc ttttttcgct gccgggaaat aaatatgtgg ttgagcagtt
    22321 cgggtcacga tgtctgcaac tctctgcaca atggttgcag aggctttata atcgtgagct
    22381 tgtgttaccc aaccggaacg tgggtaaata tttccccagc tatcgcctac acggccaact
    22441 tcccgcattc ccggaatcag agcttccgga taaaacattt ccggcatatt ttcacgccaa
    22501 gcaaagaaat ctaatccact tagaaaatag ggtataaatg gtgtggtttg acttttacaa
    22561 tagtagcctg tacttcctaa taactgacca attgctcctt ggggatgccc gaaagcatct
    22621 gcatttttga aggttagttg agagtattga cgttgcggag aacgatattc tccgcctttt
    22681 acgccaggat tgagagattg taattctgtc cacggagttt gcccatcctg gttataagat
    22741 gaaacgacca tttccggtaa ataatgctta attttggttg atgtacgaac cttgcatcca
    22801 aagtaggtgc aaaataacca gaagcacgtt ccgacgactt tatagtctaa acagcttgtt
    22861 gaggcacttg atgcagcaat cgacgccgta ttcaatgatg cttttacctg ttgaggatat
    22921 aaggttgttg gtactgctaa acttacagag agaagtaccg aaaaaaacgc tcttttcatt
    22981 ttgattcacc gtgttgttga acccatttat gccattcatc tagtgctttt tgtatatcag
    23041 tcataccata aatcacgctc ggagaggatt gcagattatt aaaaaacacc gcaggcactt
    23101 ttttaattcc attttgccat ccactgatca ccccttgata agcatctttt aattgctctt
    23161 cttgggcttt ccaatctgct gaattaaaga atgctcgtat ttctcgttcg gcaatctcgg
    23221 gggatttact gagatttcga ctgatttcct cttcaaaatt ctctacttga tcaagataat
    23281 aaacttggga ggcaagttgt gaattttgaa tggggtacat ctttgttgta tagacaatga
    23341 tattcggctg tgcttgtgcc actacagaaa acactactgt tactatgctg aaatatccta
    23401 gaaatctact tgctttcatc actctctttc cgaataaata agcagaaaat tagcgagatt
    23461 tttacataga ggataggaaa aactcttttc aaaaaagaga tatttttttg agcaaaaaat
    23521 ggttgatttt ataaatggat ttcgtatgat atggaatatt aagatgctgt ggaaacagcc
    23581 cttaaaagtc gcataactct tgagaagcgg cggctatcca tcgaggtagt tgagttattt
    23641 acccaaaatg tctcccagca ttctgaaagg gaacgctgca aatttgcagg aatgccacct
    23701 aaacacctac cttccgaggg atatttcaat tcccttggaa ttgcgatctc ctgaggaatt
    23761 ttatttattt aactttttat aggagaactc gctatgagtc aacaaaccgc aggatgggat
    23821 gtgatcccat ttgaatcgtc aaaaaccgca aaaccttctc ttttttggaa acttggcaat
    23881 aagctcggta atattttcgt ttcggcgaaa cataaagcta aaagcaaata tgtcgaggta
    23941 accaaaggca tcaatcaacg aattgctgaa gaagatgaaa tgcgagcctt agaattgcaa
    24001 atgtgcttag atgagcaagc agctgaatat gagcaggaaa tttctcgcat taagcgtaag
    24061 atgtttttca gggctttatt cgttgcgatt attgcctttt tatgtggtat ggctaccgtt
    24121 tttggtactc agctctcttt aatctaattt aactcaccca tcggggaaat gctatttccc
    24181 ttgtggtaat acatttcccc ttaattttgg agaaatgtat gtcagttcat atcaaactct
    24241 cctgtgttgg agatattttg ccaatcaaac tcaatgaatg gacaccggaa catcgagcct
    24301 tacatcacga aattagccat aaagctctcg aagcctggca aaatcgagat aaaggcactc
    24361 aaagcgtgcg atttatgcaa caaatgccag cccgacaagg actgcatttc cgctttctga
    24421 gtgtatcgga gcaagacggc aagctcattg tcagtcgttc atagttggtt caatgtttgg
    24481 taagcttttt tacaaaatga atcccaaagt actagctaaa atcggagaag attttagaaa
    24541 agctggttat cttatgggag ctggttttgt cggaatggta atttccaatg atcagatttc
    24601 cacatcggaa ggatttgttc tttttttgtg gggattgtat atttggatta tcgggcatat
    24661 cgcactacat cattctgaga aaatacttaa ttcaaagcaa ggagaaccga aatgagtccg
    24721 tactttttag gtgctgctat tggaacagcg ttattggcaa caatttttat tgttctagta
    24781 acttgggcaa atcgagatat tttgtttaca aaatcagata agccacagtc taaatagcaa
    24841 aactccattc taacccatag gggaacaagt tccccgagga gcttgttctc cgttttacct
    24901 tccttttacc ctatcgggaa atactttccc gaattgggct taagtgtttc ccattatttt
    24961 ttattttgga gaaacattat gtcagattca gtattaaaca cttattttaa acacgctctt
    25021 gtcaaagctg gttttccgga taccttagat atggagtatt cactcagcca ttgtcaagga
    25081 gatggagtcg cattttatgg tcggcttggt acagatgatc taatccagct tttcaatcat
    25141 ctcaatccac agaaacgtaa acagaaaatg tttgctaatt tgctaacgca cattgaatct
    25201 tgggaaaccc acgatgatat tggttttgaa attatacgaa atcgctttgg gtatcgttac
    25261 tcgcattgga atacgatgga gctttatgct aaaactgcag atcagttagt gtttttcaat
    25321 gatagtgatg ctcgaagaaa ctggtatttt cctacttcaa aagtggataa atacaaagca
    25381 ttgtgggacg gatttatcga agatttggag cagtacatca aagatatttc ccgtgaaatg
    25441 gaatcggtcg gttatcaaat tattgaagcc tcgccgtatc aaacggaaac cgttttcaaa
    25501 tttaatacgg aaaaatatct agtagaactg caacgtaaac cttctgagtt ttattcagag
    25561 cttgttgatt gggcatttgg tgatatgtgt gattttgaag cagctataga gcagatttgt
    25621 caagggcaac tctgttatgc tgattttgaa gcaactgtta ccgataagaa aagtgaaatt
    25681 cagttaggtc ttgctcgctt gagtggaata agttactcgc cgaatgaccg ttcgtttagt
    25741 ggttatcgac aagagcttat tggtgaggcg attgcctctg ctcgccataa tgcagcacgt
    25801 tttgcctact tgcacgccta atttgcagat ttttacttta atttgaccgc ttgtagtggt
    25861 taattttcac cccgtgggga aatattttcc ctattgggca aaatgtttct ccacttttta
    25921 atttggagaa atgttatgaa aaatgaacac aatttagagc aacttaaata tatttgggat
    25981 aaccgcaacc ttgaaaataa agtctatcaa tatctgtttc acatctgcat tgagccgatg
    26041 aaaaaaggag attggaatcg ttatacgatt tggcttaatt ttcacggtaa cttaatcaac
    26101 gtgtcagacg ttgtatatcg agttgtggaa tctcaaaagc tcaaagatga catcaaaatt
    26161 tggtatgaca agcaatacta ttgccgtcca accaaagttg aaacaacagg ttttatttcc
    26221 atttttctgc acctgtttta tgagggcata gctcgtattt tgctggaaca gggaatgatt
    26281 actgaaactg aagcagccga gaaaagttac aacttcagag ctgcaaattg ttttcaacgt
    26341 ttgctttaat ggaggtgaga taatggaacc tcgcactgtt aaagttattt acgatgatgg
    26401 cgattatttc tttaccctaa tcaatgccga tgaacagact attcgtaatt actacgctat
    26461 aggcagttca atcggttttg ataacacaag gaaaattgtc gctgttgaaa ttttataaac
    26521 tacccatcgg ggaaacgact tccccatagg gcgatagtgt ttccccattt ttctacccga
    26581 actttggaga aacacttatg aaccctcaat caaacacaca gcctaaattt gatttatatc
    26641 aagaagtgac cgataaaatc atcgccgctt tagagcaagg aacggctcct tggcttaaac
    26701 cttgggatag cgttattcct tatggtggta tgccgtgtaa tgccatatcc ggaagattgt
    26761 attccggaat caatgttttg ttactttggt tgtctgccgc agaacacggc tatatccaac
    26821 gcaagtggat cactgcaaaa gcagctattg aagccggtgg acacgttcgg aaaggtgaaa
    26881 aagcaaccct tgcggtcagc tatcgcccgt atgatcgaga aaaaaccgat gatgatggca
    26941 accttgtcct cgatgacgat ggtaacccgg taatcgaaca tctcgcttcg attaaaaagc
    27001 actgcctatt caatattgaa cagtgcgaaa aactgccaca ggactggtat gaaacggttg
    27061 aaaccccaga acagctgact gacgaaaatc agtatgctat ttttgaggag attcgtttga
    27121 tgttgaaagg tatggatttg caagtgatgg taaaaccaag caatcaagct tactaccacc
    27181 cacgcaatga ccatatcgtg atgccggaaa tgaagcagtt tcattcacca caaaaattcc
    27241 atagcgtgct gctacatgaa atgactcacg caacagggca tcaatctcgc cttgctcgtg
    27301 atggtattgt ttccggaaaa gctcgctttg gcaataaagt ttatgctttt gaagaattgg
    27361 tcgctgaaat gggctgtgca ttcttgtgtt ctcacctagg ctttgctgac gtgccacaaa
    27421 atgccagcta cattgaaagt tggatcaagg tgttaagaga ggataaacgg gcaattttca
    27481 gggcttcagg gaaagctcgg gaagcctgtc aatatatgct ggatgcctta aacatcgcac
    27541 agctggctga taaatacgaa gtatttgaag aagccgctta ataaatttgc cgaaaggcat
    27601 ttcccgtggg gagatactct cccttcgggg cattgtgtct ccctttttat tcacttaacg
    27661 agaggactca atgctcaatc taaacttatt taaacgaccc attgaaattt cgacacttga
    27721 atcttggtca aaattctgtg atgatgttgg taaagtagct tttgttgcag tacctgctat
    27781 gctgtatagt aattacgagt tttggattaa gataagcagt ataattggtc tatttatagc
    27841 tacctatttc tgtttagtta tcggtagaaa tatacgccaa tttattgaga aggagaaatc
    27901 aaaatgggat taatgatcgg catttggatt attgctttta ttgcatttgg gttggccata
    27961 tggacaagcc atattctaaa aaagcaagat gaacgcctta aacagctaaa aaatagctaa
    28021 ctttcaaaat acggcacatt ttgtgccgta tttcttttgt actggtggca aatataagat
    28081 tactatcatc agtatattgt aatatctcaa ctcaacagca ttagtcaaaa atcctccaac
    28141 atattcagag agtttttcct actgagttct cttatttttt ggttcaatac tctcccttta
    28201 taaattaaat ttggttcaga taaaagccgc tcaatggcaa aaggataaag gagcccttac
    28261 gggcaagggt aatcccctaa gggggaataa g
//
LOCUS       DANLZQ010000020        23995 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.020, whole genome shotgun sequence.
ACCESSION   DANLZQ010000020 DANLZQ010000000
VERSION     DANLZQ010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 23995)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23995)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23995
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.020"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            21..1163
                     /gene="tuf"
                     /locus_tag="PXE50_000819"
     CDS             21..1163
                     /gene="tuf"
                     /locus_tag="PXE50_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HDL5621751.1"
                     /translation="MGTIGHVDHGKTTLTAAITTVLAKHFGGAARAFDQIDNAPEEKA
                     RGITINTSHVEYDTATRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQT
                     REHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQYDFPGDDTPIVRGS
                     ALQALNGVAEWEEKILELANHLDTYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRV
                     ERGIIRTGDEVEIVGIKDTAKTTVTGVEMFRKLLDEGRAGENVGALLRGTKREEIERG
                     QVLAKPGSITPHTDFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGV
                     EMVMPGDNIKMTVSLIHPIAMDEGLRFAIREGGRTVGAGVVAKIIK"
     gene            1460..2758
                     /gene="tig"
                     /locus_tag="PXE50_000820"
     CDS             1460..2758
                     /gene="tig"
                     /locus_tag="PXE50_000820"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HDL5621752.1"
                     /translation="MSFSIETLEGLKRRVTINVPADKIEAAYKEQLKGYAKNARVDGF
                     RKGKVPHSIIEQRFGIAARQDVLSDEMQRAFFEAVIAEKINLAGRPTFTPNNYQPGQD
                     FSFTAEFEVFPEVELKGLENIEVEKPVVEIADADLDKMVDVLRKQQATWSESQEAAKA
                     ESRVTIDFVGSVDGEEFEGGKASDFVLFMGQGRMIPGFEDGIVGRKAGEQFDIDVTFP
                     EEYHAENLKGKAAKFAITLKKVEEMVLPELTEEFVKKFGNAKSVEELRAEIKKNMQRE
                     LKNAVTSRVKTQVINGLIAQNDVEVPAAAVEEEINVLRQQAVQRFGGKPEMAAQLPAE
                     LFEAEAKRRVQVGLLLSSIIGSNELKVDEKRVEEMIADIASAYEQPAEVVAHYAKNRQ
                     LTENIRNVVLEEQAVDAVLAKAKVTEKTMSFDEVMSQQAQ"
     gene            2874..3326
                     /locus_tag="PXE50_000821"
     CDS             2874..3326
                     /locus_tag="PXE50_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HDL5621753.1"
                     /translation="MEQLTFAQQLEQFFANHTLMVFAWVALLIAVIFSFYKSATQKYK
                     IVDNAQATQLINKEEAVVVDLRSDEEFRAGHIIDSIHVLPSDIKAAKINQIDKYKARP
                     VIVVDTNDFTSGGVAADLAKQGFSRVYVLKEGIGGWRAASLPTIKKHK"
     gene            3347..3847
                     /gene="secB"
                     /locus_tag="PXE50_000822"
     CDS             3347..3847
                     /gene="secB"
                     /locus_tag="PXE50_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HDL5621754.1"
                     /translation="MSEENQVASTEEATQTPFELQIQRIYVKDVSFEAPNLPTIFQQE
                     WKPQLGFELDTETKEIGEDLYEVTLHITVQTTLEDSNDVAFICEVKQAGVFTIKGLEG
                     IQLAHCLASQCPNVLYPYARELISSLVNRGTFPALNLSPVNFDALFMDYLQRQEESAE
                     EPALAN"
     gene            3954..4964
                     /gene="gpsA"
                     /locus_tag="PXE50_000823"
     CDS             3954..4964
                     /gene="gpsA"
                     /locus_tag="PXE50_000823"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HDL5621755.1"
                     /translation="MSEIYSAPITVLGAGSYGTALAIALSRNGHKTYLWGHNPDKMAV
                     LASERMNQDFLPDIVFPEALEIVADLATAVQKSKDLLIVVPSHVFSEVLAQIKPFLSQ
                     DHRIMWATKGLERDTGRLLQTVAKEILGEIYPLAVLSGPTFAKELAAGLPTAISLAST
                     DPVFADQMQKRSHCSKAFRVYLNNDIIGVQLGGAIKNVIAIGAGISDGMGFGANARTA
                     LITRGLAEISRLGVSLGADPKTFTGMAGLGDLVLTCTDNQSRNRRFGLALGQGKSAEV
                     AIAEIGQVVEGFYNTKEAYLLAQTQGVEMPIVEQIYQMLFCGKQASDVVKTLLGRERK
                     GE"
     gene            4980..5795
                     /gene="cysE"
                     /locus_tag="PXE50_000824"
     CDS             4980..5795
                     /gene="cysE"
                     /locus_tag="PXE50_000824"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HDL5621756.1"
                     /translation="MQQSEINQIWQAIRDEAKELANCEPMLASFFHATILKHHNLGDA
                     LSYILANKLENPIMPAIALKEIIEEAYRAEPQIIASAACDINAVRTRDPAVDKWSTPL
                     LYLKGFHALQSYRVTHYLWNQGRKALAVYLQNEISVAFDVDIHPAAKVGCGIMFDHAT
                     GIVVGETSVIENDVSILQGVTLGGTGKENGDRHPKIREGVMIGAGAKILGNIEIGRYS
                     KIGANSVVLQPVPDHATAAGVPARIIGKSSEQKPAFDMNQYFEDEQGLFGDGI"
     gene            5844..6455
                     /locus_tag="PXE50_000825"
     CDS             5844..6455
                     /locus_tag="PXE50_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HDL5621757.1"
                     /translation="MQLTFNDFQNYYNGKGDLTMFSFYGKKTWENGIYVGIDGSIGRA
                     NNKLSHQSQTIKLARNVYSLGLTVGKTLEVASFNLQPSFGMRYHHLTSANAQLENTKF
                     ETDRVDLLAIQAGLALNKTFIFNELKVKPELGSYFVDASHGTLKTKLNEFSLNQNIGR
                     YFKQEVGITLHYKGVSSSVHAGFTKGNTLQEQKFISLKVGYEW"
     gene            complement(6995..7687)
                     /locus_tag="PXE50_000826"
     CDS             complement(6995..7687)
                     /locus_tag="PXE50_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HDL5621758.1"
                     /translation="MTELTPKQEAFCFAYIETGNASEAYRQAYETEDMKSETVHRKAK
                     ELMDNGKITARIEELKAEHAERHKLTVDDLLKELEEARILAREKENPNAMTQATMGKA
                     KLLGLDKQVTDPCFDGETGKGDMILSVNCSSIKDGKALDETCILKAGTHEFITRDSFI
                     FYRHIRIDSLDEIKANIEAGYFIQKALINDEAYQQILKGVLSSKSVTPRYKRFLKNAI
                     RQSACPDILAEP"
     gene            complement(7684..8109)
                     /locus_tag="PXE50_000827"
     CDS             complement(7684..8109)
                     /locus_tag="PXE50_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621759.1"
                     /translation="MKHELNLAGITALMNEPIKATLSFLDFPHIRIERLHHDNGRPFF
                     IGVLSLDLEDHINIEMAGATGFLEALAIIAYHQQLTATPLLVNDDLLSEINKLPHPQR
                     TNPFIDRHGNEITREQMSKEYREKIDYAFAEKRMAEGKE"
     gene            complement(8116..8268)
                     /locus_tag="PXE50_000828"
     CDS             complement(8116..8268)
                     /locus_tag="PXE50_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621760.1"
                     /translation="MPELLIVLGNRIAKLEQQHNAMPSETDSITLGILRKQLSQLLKV
                     AERIKE"
     gene            complement(8429..9115)
                     /locus_tag="PXE50_000829"
     CDS             complement(8429..9115)
                     /locus_tag="PXE50_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621761.1"
                     /translation="MADHSQFISRLENRIEPKISFQELIQELSNYTNKPFSHIADKLK
                     SLIFSFQQNGIYTNAFVNCTLFEDGESYAIEPKTLHFKDAFDQPKGVLSDVIAQNSID
                     VEHLNAYYVTAREITQLIKTQSPTLLDKLTTKQTQSEISQIQNDYISVYDFIEWASKH
                     YSSLSETANDLNRLLKDKNIQLYRQYGGISPSIDKDNTNLKAAFDFVAINNGYEKQSS
                     SFNFDDDIPF"
     gene            complement(9510..9833)
                     /locus_tag="PXE50_000830"
     CDS             complement(9510..9833)
                     /locus_tag="PXE50_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative addiction module antidote protein"
                     /protein_id="HDL5621762.1"
                     /translation="METIQINEQAAEKHGLRPFDVAEFLTDEATIQAYLAEVLKEGDQ
                     DEFLEALNDVARARGMAELAKQTGLGRESLYKTLAKGSKPRFDTIQKILGAFNLVLIP
                     QVKNG"
     gene            complement(9946..10164)
                     /locus_tag="PXE50_000831"
     CDS             complement(9946..10164)
                     /locus_tag="PXE50_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="addiction module killer protein"
                     /protein_id="HDL5621763.1"
                     /translation="MMREQTTNQIIITDNFSKWLENLKNPIAKATVARRIKNAINGNF
                     GDHKSLAGTGGLYEMRIATGAGYRIYYA"
     gene            complement(10439..11665)
                     /locus_tag="PXE50_000832"
     CDS             complement(10439..11665)
                     /locus_tag="PXE50_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL5621764.1"
                     /translation="MARKITPLNDTQIRKAKPEDSPLRDGNGLLLVITSNSKLWRFRY
                     ERPFTKKRNDLSIGAYPDISLAQAREIREEYRALLAQNIDPQTHRQQQEQAKANEISN
                     TYENVAWAWLEHRKTKKNFSDNYQKDVIALIKNNLLPHFGRMPITQITAPMAIKAFKQ
                     YQDEGKLEKLKRAIQKHNEIMMFAVHREMIPFNPTANIAKEFDSPTVEHFKTIKPEDL
                     GEFLYTLQNAQIHLQTRYLILWQLLTMTRPNEAAKAKWADIDEKAKLWTIPAENMKRG
                     IEHKITLSRQAIALLREIKKLSGGKTYLFPSVKNPQTHVNTQTANGAIKRMGYKGKLV
                     AHGLRAIASTYLNEKGYNSDLIEVALSHLNSDRIKAAYDRGERLEQRFKLLQVWADFV
                     EECSQGSLPQYHLKIA"
     gene            complement(11940..12306)
                     /gene="ssrA"
                     /locus_tag="PXE50_000833"
     tmRNA           complement(11940..12306)
                     /gene="ssrA"
                     /locus_tag="PXE50_000833"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            12472..13431
                     /gene="rpoH"
                     /locus_tag="PXE50_000834"
     CDS             12472..13431
                     /gene="rpoH"
                     /locus_tag="PXE50_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HDL5621765.1"
                     /translation="MKKFNENEIEDAEIIDAEPIDVDEIDEEETSVEAMHPALVSGSM
                     PVPQGNLDSYIRMANQYPILTAEQEKELAERYYYDEDVEAAKQLILSHMRFVIHIARG
                     YLGYGLPLADLIQEGNIGLMKAVKRFDPNVGVRLVSFAVHWVKAEIHEYVLKNWRIVK
                     VATTKAQRKLFFNLRKNKNRLAWFNEEEIKKVADDLGVSVEEVREMESRMTGQDLGFD
                     LPAGDDDEDSYAPSMYIEDSSSNFADDLEDEQHNGQATAQLAYALATLDERSQDIIKT
                     RWLDDNKATLQDLADKYNISAERVRQLENAALKKIKEAISLDG"
     gene            13597..13890
                     /locus_tag="PXE50_000835"
     CDS             13597..13890
                     /locus_tag="PXE50_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3144 domain-containing protein"
                     /protein_id="HDL5621766.1"
                     /translation="MTQLSTSVYQRADGFINVANAHLKNIAPNQVSNAMLFGCARFNA
                     YVAASKAEYKQQLADSREEVIQYFVEQYKEMLTANLDEYIQNFERYIEGKKAD"
     gene            complement(13908..14153)
                     /locus_tag="PXE50_000836"
     CDS             complement(13908..14153)
                     /locus_tag="PXE50_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HDL5621767.1"
                     /translation="MAIQAIPASQDFIWDGKDDDERPVTPSEFSIAMKKRGRPAGSKK
                     ELVSLRLDKSVLEAFRASGKGWQSRINQVLSDFVKQV"
     gene            complement(14209..14472)
                     /locus_tag="PXE50_000837"
     CDS             complement(14209..14472)
                     /locus_tag="PXE50_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HDL5621768.1"
                     /translation="MKIYTWDETKRKINLAKHGLDFADADEVLSSPYRFDVEVIRNNE
                     FRIQSFAYSFGRLLVLSLAYTEREDYIRVISFRRASKAEREAY"
     gene            complement(14610..15149)
                     /locus_tag="PXE50_000838"
     CDS             complement(14610..15149)
                     /locus_tag="PXE50_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIIA family hydrolase"
                     /protein_id="HDL5621769.1"
                     /translation="MLDLTKIKLVITDVDGVLTDGGMYYTDQGEVMKRFHVHDGLGVK
                     MLQSCGIKVAVLSGGDTALLRKRLEVLKIDLALLGKMEKRSACFELMQQAGVTPEQTA
                     YIGDDTLDLPAFEVCGIAIATRNALDYIKEKADWVLQKAGGEGAFREVSDQILEAQGF
                     GEIFKTADGFLTVAGKMAQ"
     gene            15220..15897
                     /locus_tag="PXE50_000839"
     CDS             15220..15897
                     /locus_tag="PXE50_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HDL5621770.1"
                     /translation="MSIAENLSQIHQQIQQISEQYQRDNVRLLAVSKTKPVEAIQAAI
                     EAGQRAFGENYVQEAVEKIEFFANRPELEWHFIGPLQSNKTKLVAAYFDWIQTVDRLK
                     IAERLNEQRPADKAPLNVLIQINISDEASKSGIEPDEMLPLAQAISQLPNLKLRGLMA
                     IPKPESEPEQQKVAFRKMQLLFNRLQTEFDDIDTLSMGMSDDMQAAIECGSTMVRIGT
                     AIFGARR"
     gene            16082..17929
                     /gene="typA"
                     /locus_tag="PXE50_000840"
     CDS             16082..17929
                     /gene="typA"
                     /locus_tag="PXE50_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HDL5621771.1"
                     /translation="MQNVDISKLRNIAIIAHVDHGKTTLVDKLLQQSGTFGETRGDVD
                     ERVMDSNDLEKERGITILAKNTAINWNGYHINIVDTPGHADFGGEVERVLSMVDSVLL
                     VVDAFDGPMPQTRFVTQKAFAHGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLGASD
                     EQLDFPIIYASALNGVAGLEHEDLAADMTPLYEAIVKHVQPPQVELDAPFQMQISQLD
                     YNNYVGVIGIGRIKRGSVKPNQAVTIVDSEGKTRQGRIGQVLGHLGLQRFEATEAFAG
                     DIVAITGLGELNISDTICDINAVEALPALSVDEPTVTMFFCVNTSPFCGQEGKFVTSR
                     QILERLNKELVHNVALRVEETSNPDEFRVSGRGELHLSVLIENMRREGYELAVSRPKV
                     IYREEDGKKQEPFEQVTIDIEEQHQGSVMEALGIRKGEVRDMIPDGKGRTRLEYVIPS
                     RGLIGFRNEFMTMTSGTGLLYSTFSHYDDVKPGEIGQRKNGVLISNATGKALAYALFG
                     LQERGKLMIDHGVDVYEGQIIGIHSRSNDLTVNCLQGKKLTNMRASGKDDAIVLTTPV
                     RFTLEQALEFIDDDELVEVTPQSVRIRKRLLTENDRKRASRTTTSTSTH"
     gene            complement(17978..18415)
                     /gene="rimI"
                     /locus_tag="PXE50_000841"
     CDS             complement(17978..18415)
                     /gene="rimI"
                     /locus_tag="PXE50_000841"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HDL5621772.1"
                     /translation="MIEQIQAEDFEQLFEIEQQAHLVPWSKGTLLNNQGEKYLNLKVV
                     EQNKIVAFAISHIVLDEATLFNIAVAPDFQGKGIGKRLLSELILQLQQRKLTTLWLEV
                     RESNHSARKLYDSLGFNEVTTRKNYYPTPNGSKENAVVMALYL"
     gene            complement(18408..18830)
                     /locus_tag="PXE50_000842"
     CDS             complement(18408..18830)
                     /locus_tag="PXE50_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit psi"
                     /protein_id="HDL5621773.1"
                     /translation="MNRRDLLLQEMGISQWVLTNPQVLKGDAQIRLNNAVKLVVVCEE
                     DHQHSRLFADILRALKLKNSEYQWLTGEQSQRLVFEHSPIFWLIQAEEQAVKMAKSFT
                     NQTAWKNESWQDLAKSTTKRQLWQQIDTFSAQFGEQRD"
     gene            18960..19949
                     /gene="rsmC"
                     /locus_tag="PXE50_000843"
     CDS             18960..19949
                     /gene="rsmC"
                     /locus_tag="PXE50_000843"
                     /EC_number="2.1.1.172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(1207)-N(2))-methyltransferase
                     RsmC"
                     /protein_id="HDL5621774.1"
                     /translation="MLSLESEVLERHLALFENKSVLLFGDVRDDFARQLQSRAEKVAV
                     FSSYFDYARHHSEVEFGLECGLSAELAVFYWTKNKQECQFQLLQWLSQCQAGQEMLII
                     GENRAGVRSVEKLLEPFGNIAKIDSARRCGLYHFELQTVPTFDCKKFWKSYRLQDLDV
                     FDLPAVFSSAELDNGTKLLLSTFDKADRLKGKVLDLGCGAGVIGATLKQQFPKIKLTM
                     SDIHAMALESGRRTLAENQLEGEVVASDVFSHINERFDLIVSNPPFHDGVDTAYRAVE
                     ELIFQAKNHLTKGGELRIVANAFLPYPDLLDKAFGKHDVLAKSTKFKVYSART"
     misc_feature    20079..20201
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00514"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="His leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00514"
     gene            20223..20600
                     /locus_tag="PXE50_000844"
     CDS             20223..20600
                     /locus_tag="PXE50_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor"
                     /protein_id="HDL5621775.1"
                     /translation="MKNPIEIYQSQDGKTQVSVQFDKETVWLSLQQMADIFGRDKSVI
                     SRHLRNIYQEGELEREATVAKNATVQIEGAREVVRLKDYLVKGYALNERRLQERGIEF
                     EQVIGLLSQYTGCLSLVGGRKFA"
     gene            20667..21107
                     /locus_tag="PXE50_000845"
     CDS             20667..21107
                     /locus_tag="PXE50_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDL5621776.1"
                     /translation="MSINISPLASKNLTEWKLLWQQYLDFYQVNLADDIIQSTWQKVS
                     ESENVKGFGAFVDNRMVGFVHIVIHPNTWNLTECCYLEDLFVLAEYRNQGIGKELIEY
                     IYRYAQEKGYNRVYWVTDKNNHQAQQLYNKLANDSGIIQYRKNF"
     gene            21137..22204
                     /gene="hisC"
                     /locus_tag="PXE50_000846"
     CDS             21137..22204
                     /gene="hisC"
                     /locus_tag="PXE50_000846"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HDL5621777.1"
                     /translation="MTISQLSRKNIQALTPYQSARRLGGSGDVWLNANEYALSPNFDL
                     TDRTFNRYPEPQPQAVIEGYARYAGVAPENVLVSRGGDESIELIIRAFCEANDSILYC
                     PPTYGMYAVSADTCGIATKTVPLTADFQLDLAQIKANLEGVKVVFVCSPNNPTGNLIK
                     RSDLFELLQITAGKAIVVVDEAYIEFCPEARLVSELANFPHLAIIRTLSKAFALAGLR
                     CGFTLANAELIGVLQKVIAPYPLPVPVSDIAAQALSPQGIEQMKTRVAEVITLRAELQ
                     KNLENLPLVEQVFDSEANYLLFKCQDGQKVFKALWEQGIILRDQHKALGLQNCIRITV
                     GAREENLRVVEAITALSQFQR"
     gene            22389..23477
                     /gene="hisB"
                     /locus_tag="PXE50_000847"
     CDS             22389..23477
                     /gene="hisB"
                     /locus_tag="PXE50_000847"
                     /EC_number="3.1.3.15"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018355873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     histidinol-phosphatase/imidazoleglycerol-phosphate
                     dehydratase HisB"
                     /protein_id="HDL5621778.1"
                     /translation="MQPTLFIDRDGTLIDEPKTDFQIDSLEKLKFEKNVIPALLKLKG
                     KYRFVMVTNQDGLGTSSFPQADFDKPHNAMMALFNSQGIEFDDVLICPHKPEDGCDCR
                     KPHTKLLQKYIDRQLFDPANSFVIGDRATDVQLAENLGIRALQYHPEKLNWDLIAEKL
                     LGEAVTNIGERPKRFAEVIRKTKETDIKVQVWLDETGNNEISTGVGFFDHMLDQIATH
                     GGFRMNITTKGDLWIDEHHTVEDTALALGTALKQAIGDKRGIARFGFVLPMDESRAEC
                     AMDLSGRPFIKFKADFKRDKVGDFSTELTEHFFQSIAFTMLATLHIKAKGDNDHHKIE
                     SLFKVFGRTLRQCIRIEGNELPSSKGVL"
     gene            23572..23856
                     /locus_tag="PXE50_000848"
     CDS             23572..23856
                     /locus_tag="PXE50_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621779.1"
                     /translation="MIREVIDFIKNNKWYVLLVVLLLGLYFYQFHGGLSSDSEKWDHF
                     GSYIGGIFSAVTLLSVLHGMQLERKRFKEQKEEFENDKRVLEKRRRKEDF"
BASE COUNT         7060 a         4710 c         5241 g         6984 t
ORIGIN      
        1 gtacaaaacc gcacgttaat gtgggtacaa tcggccacgt tgaccatggt aaaacaactt
       61 taacagcagc aatcactacc gtattagcaa aacacttcgg tggtgcagct cgtgcatttg
      121 accaaatcga taacgcgcca gaagaaaaag cgcgtggtat caccatcaac acttcacacg
      181 ttgagtacga tacagcaact cgtcactacg cacacgttga ctgcccggga cacgcggact
      241 atgttaaaaa catgattacc ggtgcggcac aaatggacgg cgctatctta gtagtagcag
      301 caactgacgg tccaatgcca caaactcgtg agcacatctt attaggtcgc caagtaggtg
      361 taccatacat catcgtattc ttaaacaaat gcgacatggt agatgacgaa gagttattag
      421 aattagttga gatggaagtg cgtgaacttc tttcacaata cgacttccca ggtgatgaca
      481 ctccaatcgt acgtggttca gcgttacaag cgttaaacgg cgtagcagag tgggaagaga
      541 aaatccttga attagcaaac cacttagaca catacattcc agagcctgag cgtgcgattg
      601 ataaaccatt cttattacca atcgaagacg tattctcaat ttcaggtcgt ggtacagtag
      661 taacaggtcg tgttgagcgt ggtatcatcc gcactggtga tgaagttgaa atcgtaggta
      721 tcaaagatac agcgaaaaca accgtaacag gtgttgagat gttccgtaaa ttattagacg
      781 aaggtcgtgc gggtgagaac gtaggtgcat tattacgtgg tactaaacgt gaagaaatcg
      841 aacgtggtca agtattagcg aaaccgggtt caatcactcc acacacagac ttcgaatcag
      901 aagtttacgt attatcaaaa gaagaaggtg gtcgtcacac tccattcttc aaaggttacc
      961 gtccacagtt ctacttccgt acaacggacg taacaggtac aatcgaatta ccggaaggtg
     1021 tagagatggt aatgccgggc gacaacatca aaatgactgt tagcctaatt cacccaatcg
     1081 cgatggacga aggtttacgt tttgcgattc gtgaaggtgg tcgtacagta ggtgcgggcg
     1141 ttgtagctaa aatcatcaaa taattaagat tgtttgataa attgaaaagc taaataaaaa
     1201 ctagaaagag gcatatcgaa aggtatgcct cttttgcttt tatgccgatt aagctagcca
     1261 tatcatatca tttcatttgc aaaaatcggt gaaaaaagac cgcttgtagg caagcccatt
     1321 gacaagcagt cagattttag ggatttttta caaaactgtt tatttgcgaa tgagtttctt
     1381 ctcgacagtt tcttgataga acgctacaat aaccgtctat ttgtatatct tttttatatc
     1441 cctaaaccga ggtttaagaa tgtcattttc aattgaaaca ttagaaggct taaaacgccg
     1501 tgttactatt aacgtaccag ctgataaaat cgaagcagca tacaaagaac aattaaaagg
     1561 ctatgcgaaa aatgctcgtg tagatggctt ccgtaaaggt aaagtgccac actcaattat
     1621 cgaacaacgt tttggtattg cagcccgtca agatgtgtta tctgatgaaa tgcaacgtgc
     1681 attctttgaa gccgtcattg ctgaaaaaat caacttggca ggtcgcccta ctttcacgcc
     1741 aaacaactac caaccaggtc aagacttcag ctttactgcg gaatttgaag tattcccaga
     1801 agtggaatta aaaggtttag agaatatcga agtagaaaaa ccggttgttg aaatcgcaga
     1861 cgctgattta gacaaaatgg tagatgtatt acgcaaacaa caagcgactt ggtcagaaag
     1921 ccaagaggct gcaaaagccg aatctcgtgt aactattgat ttcgttggtt cagtagatgg
     1981 tgaagaattc gaaggcggta aagcatcaga cttcgtgtta tttatggggc aaggtcgtat
     2041 gatcccgggg tttgaagacg gaatcgtagg tcgtaaagcg ggtgagcaat tcgacattga
     2101 tgtgactttc ccagaagaat accacgctga aaacttaaaa ggcaaagcag cgaaatttgc
     2161 aattaccttg aaaaaagtag aagagatggt attaccggaa ttaaccgaag agtttgtgaa
     2221 aaaattcggt aatgcaaaat cagtggaaga attacgcgca gaaattaaga aaaatatgca
     2281 acgtgaactt aaaaatgcag tcacttcacg tgtgaaaact caagtaatca acggcttaat
     2341 tgctcaaaat gatgttgaag tgccggctgc tgcggttgaa gaagaaatca acgtattacg
     2401 ccaacaagcg gtgcaacgtt ttggtggtaa gcctgaaatg gcagctcaat taccggctga
     2461 attatttgaa gcagaagcta aacgccgtgt tcaagtgggc ttattattat cttcaatcat
     2521 cggttctaac gaattaaaag tagatgaaaa acgtgttgaa gagatgatcg cagatatcgc
     2581 ttcagcttac gaacaaccgg ctgaagtggt tgctcactat gcgaaaaacc gtcaattaac
     2641 tgaaaatatc cgcaatgtgg tattagaaga gcaagcggtt gatgcagtgc tagcgaaagc
     2701 gaaagtgact gaaaaaacaa tgtcatttga cgaagtaatg tcacaacaag ctcaataatt
     2761 tccttataag gtgggctttt gctcaccttt tattactttt acaagcggtt aaatttagtg
     2821 ataaatttgc atcaaaacga ccgcttattt tttgatgtta aggaaattga attatggaac
     2881 aactaacttt tgctcaacaa ttagagcaat tttttgccaa tcataccttg atggtgtttg
     2941 cttgggttgc attattgatt gcggtaattt ttagctttta taaaagtgca acgcaaaaat
     3001 ataaaattgt cgataacgca caggctacac agctgattaa taaagaagag gcagtagtgg
     3061 ttgatttacg ttctgatgaa gagttccgtg ccggtcatat tattgatagc attcacgtgt
     3121 taccgtcaga cattaaagca gctaaaatca atcagattga taaatacaaa gctcgcccgg
     3181 taattgtagt agacactaat gacttcactt caggtggtgt tgcggcagat cttgctaaac
     3241 aaggctttag cagagtttat gtattaaaag aagggattgg cggctggcgt gcagcaagcc
     3301 taccaactat taaaaaacat aaataatcta ttattaagga aattttatgt cagaagaaaa
     3361 tcaagttgca tcaacagaag aagctacaca aacccctttt gagcttcaaa ttcaacgcat
     3421 ttatgtaaaa gatgtttcat ttgaagcacc aaatttaccg actattttcc aacaagagtg
     3481 gaaaccacaa ttaggctttg agttagatac tgaaaccaaa gaaattggtg aagatttata
     3541 cgaagttacc ttacacatta cggtgcaaac tacgttagaa gacagcaatg atgtcgcttt
     3601 catttgtgaa gtaaaacaag caggtgtgtt tactattaaa ggtttagaag gcattcaact
     3661 tgctcactgc ttagcttcac aatgtccgaa tgtgctttat ccttatgctc gtgagctaat
     3721 ctcaagcctt gtgaatcgtg gtacattccc ggcattaaat ctctcaccgg taaactttga
     3781 tgcgttattt atggattatc tccaacgcca agaagaaagt gcagaagagc cggctttagc
     3841 gaactaagca ttttagatag aaaataggta tgcaaggcat acctattttt ttacaagcgg
     3901 ttattttttc tactattttt tgcaattttc taaataagcc gaacagagga aatatgagtg
     3961 aaatctattc tgccccaatc acggtattag gtgcaggttc ttatggaaca gctttagcca
     4021 ttgccctttc tcgaaatggt cacaaaacct atttatgggg gcataatccc gacaaaatgg
     4081 ccgttttggc atcagagcga atgaaccaag attttctgcc tgatattgta ttcccggaag
     4141 ccttagaaat tgtcgcagat cttgctacag cggtacaaaa atcgaaagat ctgctgattg
     4201 tggtgccaag tcatgtattc tctgaagtat tggctcaaat caagcctttt ttgtcccaag
     4261 atcaccgtat aatgtgggca accaaagggc tggagcgaga taccgggcgt ttgttgcaaa
     4321 cggtagctaa ggaaattttg ggggaaattt acccgcttgc ggtgctttcc ggtccgactt
     4381 ttgccaaaga actggcggca ggcttgccaa cagcgatttc gcttgcctca actgatcctg
     4441 tttttgccga tcaaatgcaa aaacggagtc actgttccaa agcgttccga gtttacctca
     4501 acaatgatat tatcggtgtg caactcggtg gggctattaa aaatgtgatt gcaattggtg
     4561 ccggtatttc agacggaatg ggattcgggg cgaatgctcg taccgccttg attactcgag
     4621 ggctggcgga gattagccgt ttgggtgttt cgctcggggc tgatccgaaa acctttaccg
     4681 gaatggcggg gcttggagat ttagtgctga cgtgtaccga taaccaatcc cgaaaccgcc
     4741 gatttggttt ggcgttaggg caaggaaaat cggcagaagt cgcgatagcg gaaatcggtc
     4801 aagtggtaga aggattttat aataccaaag aagcctattt gctcgctcaa acacagggcg
     4861 ttgaaatgcc gattgtagaa caaatttacc aaatgttatt ttgtggcaaa caggcttcgg
     4921 atgtggtgaa aaccttgttg gggcgtgaac gaaaaggcga ataaagaaag gagaataaaa
     4981 tgcagcagag tgaaattaat cagatttggc aagcaattcg agatgaagcc aaagagctgg
     5041 cgaattgtga acctatgtta gcaagttttt tccacgctac cattttaaaa caccataatc
     5101 taggcgatgc gttaagttat attttggcga ataagttaga aaacccgatt atgccggcaa
     5161 tcgccttaaa agaaattatt gaggaagctt atcgagcaga gccacaaatt attgctagtg
     5221 cagcttgtga tattaatgcg gtcagaacta gagatcctgc ggtggacaaa tggagtacac
     5281 ctctgctgta cttaaaaggc ttccacgctt tacaaagcta tcgggtgacg cattatcttt
     5341 ggaatcaagg caggaaagca ttagcggttt atttacaaaa tgaaatttct gttgcctttg
     5401 atgtggatat tcatcctgcg gcaaaggtcg gttgcggaat tatgtttgac cacgccaccg
     5461 gtattgtggt gggtgaaacc tctgtgatcg aaaatgatgt ctcgatttta caaggtgtaa
     5521 cactaggcgg tacagggaaa gaaaatggcg accgccaccc gaaaatccgt gaaggcgtga
     5581 tgattggagc cggtgcaaaa attctcggta atattgaaat cggacgctat tctaaaatcg
     5641 gggcaaattc agtggtgcta caacctgtgc ctgatcacgc cacagcagca ggtgtaccgg
     5701 ctcgcattat cggcaaatcc tctgaacaaa aaccggcttt tgatatgaat caatactttg
     5761 aagatgagca aggtttgttt ggtgatggga tttaggtaag agttattcct ttaatttatg
     5821 atttagacat tgctaagtac aagttgcaat taacctttaa tgattttcag aactactata
     5881 atggtaaagg ggatttaact atgttttctt tttatggtaa gaaaacatgg gaaaatggca
     5941 tttatgtagg gattgatggt agcattgggc gtgcgaataa caaattaagc catcaaagcc
     6001 agacgataaa actagccaga aatgtatatt ctttaggatt aacggtaggt aaaacgttgg
     6061 aagttgcaag ttttaaccta caaccgtcat ttggtatgcg ctatcatcat ttaacatctg
     6121 caaatgccca attagagaac acaaaatttg agactgatag ggtagatctt ttggccattc
     6181 aagctggttt agcattaaat aaaactttta tatttaatga attaaaggta aaacctgaat
     6241 taggaagcta ttttgttgat gcaagccacg gaacacttaa aactaagtta aatgaatttt
     6301 ccttaaatca aaatataggc cgttatttta agcaagaagt agggattaca ctccactata
     6361 aaggggtatc aagttcggta catgctggct ttacaaaagg aaatacatta caagaacaaa
     6421 aattcatttc actcaaagtt ggatatgagt ggtaagcttt atgtaacctg aagctacact
     6481 tgaatcggtt caaacataat gttactaaaa aagccttgaa acattgattt tcaaggcttt
     6541 ttaggtatcg gttgaaccgt ataggattat aatttggtgc tggggtcatc tgaattgtat
     6601 cacttcaagc attgataaat aagggttttg gttaattcaa attttatttg tactcctaaa
     6661 tatactccta aaattcaaag tgccttattg cttaggctat tttgtgtaca attattcgga
     6721 tcgtgtatag ggaaatttag ttcgtagttt tctatagtag tttaagttta taaagaaaaa
     6781 atttaaaact ttttgaaatt ttacccactt tacccactga tttgttggaa gccttgatat
     6841 ataaggcttt atagccagtg ggaagcaagt gggttacagt gggttaagtg ggtaactttg
     6901 atttttaccc actgttagcc acttttagag gggaaatatt agcggttttg gtagtggtta
     6961 aagggcaaaa aaggccttaa ttctcatcaa cggcttaagg ttcggctaga atatcagggc
     7021 aagcactttg gcggattgca ttttttagga agcgtttata tctaggcgtt actgattttg
     7081 acgatagtac gccttttagt atttgttgat aggcttcatc attaattagg gctttttgaa
     7141 tgaaataacc ggcttctata tttgccttaa tctcatctaa cgaatcgatt cttatatggc
     7201 ggtagaaaat aaagctgtcc cgtgtgataa attcgtgtgt tcctgccttt aaaatacaag
     7261 tttcatcaag tgctttcccg tctttaatgc ttgagcagtt tacacttaaa atcatatctc
     7321 ctttaccggt ttcaccatca aagcacggat cggtaacctg cttatccagc cctagcaact
     7381 tcgctttgcc cattgtggct tgagtcattg cgttagggtt ttctttctct ctcgccagta
     7441 tacgagcctc ttccagctcc tttaaaaggt catcaacggt taatttatgg cgttctgcgt
     7501 gttcggcttt cagttcctca atccttgccg taatcttgcc gttatccatt agctctttag
     7561 cttttcggtg gacggtttcg gacttcatat cttcggtttc ataggcttgg cggtaggctt
     7621 cgctagcatt gccggtttca atataagcaa agcaaaaagc ctcttgtttt ggtgtgagtt
     7681 cggtcattct ttcccctccg ccattcgctt ttcagcaaag gcataatcga ttttttctcg
     7741 gtattctttg ctcatctgct cccgtgtaat ttcgttgccg tgtcggtcaa taaatgggtt
     7801 tgttcgttgt gggtggggga gcttgttgat ttcactcaat aagtcatcat tcactaatag
     7861 cggcgtggcg gttagctgtt gatgataggc aataatcgct agagcctcta aaaagcccgt
     7921 agcccctgcc atttcaatat tgatatgatc ttcaaggtca agagaaagca caccgataaa
     7981 aaacggtctg ccgttatcgt ggtgcagtcg ttcaattcgg atatgcggaa aatctaaaaa
     8041 gctcaaggtt gctttgatag gttcattcat taaagcagta atacccgcta aattaagctc
     8101 gtgtttcatt ttggtttatt cctttattct ttccgccact tttaacagtt ggctaagttg
     8161 ttttcttaaa atgccgagtg tgattgaatc ggtttcgctt ggcattgcgt tatgttgttg
     8221 ttccagcttc gctattcggt tgcctagcac aattaaaagc tcgggcaatg ggtaagctcg
     8281 gtttcagaat agaggcttaa aaacgtgaat agtctgctaa ataatcaggt gttatctcag
     8341 aaaaatcgag ctttttccct agtgctgctt ctaattcttg tttatttaaa agtaaatttt
     8401 ggaaatcatt taaattcatt gctgccacct agaacggaat atcatcatca aaattaaagc
     8461 tgcttgattg tttttcatat ccgttattaa ttgctacaaa atcaaaggct gcttttaaat
     8521 tagtattatc tttatcaatg cttggactta ttccgccata ttgtcgataa agctgtatat
     8581 ttttatcttt gagtaagcgg tttaaatcgt tagctgtttc actaagactt gagtaatgtt
     8641 tacttgccca ttctatgaag tcataaacag aaatataatc attttgaatt tggctaatct
     8701 ctgattgtgt ttgcttggtg gttaatttat ctaacaaggt tggcgattgt gttttaatca
     8761 gctgtgttat ttctcttgct gttacgtaat aagcatttaa atgttcaaca tcaatagaat
     8821 tttgagcaat aacatcactt aaaacgcctt taggctgatc gaaagcgtct ttgaaatgta
     8881 gtgttttggg ctcaatagca tagctttcac catcttcaaa gagagtgcaa tttacaaaag
     8941 cattcgtata tattccattt tgctgaaagg aaaaaatgag gcttttcaat ttatccgcta
     9001 tatgtgaaaa aggtttattt gtatagtttg ataattcttg tatcagttct tgaaagctga
     9061 ttttgggctc aatacgattt tcaagcctag aaataaattg actgtgatct gccataagcg
     9121 cccctttaac gtatcccttt actgtgagag cgtggaaaga gaaataaagg gctttctcct
     9181 ttcgtgccgg ttaattactc cgccactatc cacgctaatt tgaataaatc cgtatagtta
     9241 cggattgaac ttgataggtt gtattttgct aattattcag ataaattaca agtaataagc
     9301 tgtgttttat tacagtaaat caaaataggc taaagatggg tttccggacg ctataaaaaa
     9361 gagcattcaa gcggtcatat ttcattaagg ttttgcgaat agtgcggaat tttcggagca
     9421 gtacgcacgc aaggagcaaa taaaaagccg tcaatatcca tcaacggcta tttaaaagtg
     9481 aggttttgac aggtagcaag tgataagttt tagccatttt tgacttgtgg aataagcact
     9541 aaattgaatg cccctagaat tttttgaata gtgtcaaagc gtggtttgct gcctttggct
     9601 agggttttat ataggctctc tctgcctagc cctgtttgct tggccagctc cgccattcct
     9661 cttgctcttg ctacatcgtt caaggcttct aaaaattcgt cttggtcgcc ctcttttaac
     9721 acttccgcta aataggcttg aatagttgcc tcatcggtta aaaactccgc cacgtcaaaa
     9781 gggcgtaaac cgtgcttttc tgctgcctgt tcattgattt gtattgtttc cattgctttc
     9841 tcctgtagtt tttaattcag cccataatgc tttcgctttc tctatatcgg cttgctgtgt
     9901 tgatttatcg ccgccgtgta acaagatata aattacattt ccttgttatg cgtaataaat
     9961 tctatatccg gctcctgttg ctatccgcat ttcataaagt ccgcctgtac cggctaaaga
    10021 tttatgatcg ccaaagttgc cattaatcgc attttttatc cgtcttgcta ccgttgcttt
    10081 tgcgataggg ttctttaaat tctcaagcca ttttgaaaaa ttatcggtaa taataatttg
    10141 attagtggtt tgctctctca tcattgccgg cttcttattc tatttattgc ttattgtatc
    10201 cattaagata cagtgagcaa gggtttttgc catttaccca cttttaaccc actttaccca
    10261 ctgtcatttt ttctttattt ttcagttagt tataaaaaaa taatagtgaa aagtgggtaa
    10321 agtgggtaaa aatcgaaaag tttacagaat tttcatcaag gggaattacg ggcataaaaa
    10381 agccgtcagg cggtttacct aacggcatta caagcggtca tttttggcgg aaaatttact
    10441 aggctatttt caaatgatat tgcggtaagc taccttgcga acattcctct acaaaatccg
    10501 cccacacttg gagcagttta aaacgttgct ctaggcgttc gcctctatca taggcggctt
    10561 tgattcggtc gctgtttaaa tgcgataagg caacctcgat taaatcgcta ttgtagcctt
    10621 tctcattaag ataagtggag gcgatggccc gcaagccgtg agccactaat ttgcccttgt
    10681 agcccattcg tttgatcgca ccgttggcgg tttgagtatt gacgtgcgtt tgtgggttct
    10741 tcacgctagg gaataaatac gttttaccgc cacttagctt tttaatctct cgcaaaagtg
    10801 cgattgcttg gcgtgagagt gtgattttat gctcaatgcc tcgcttcata ttttccgccg
    10861 gtatcgtcca cagtttggct ttttcgtcta tatccgccca ttttgcctta gccgcttcat
    10921 tcgggcgggt cattgtgagt aactgccaca gaattaaata gcgtgtctgt aaatgaattt
    10981 gggcgttttg taaggtgtat aaaaactcgc ctaaatcttc cggcttaatg gttttgaaat
    11041 gttcaaccgt tgggctatca aactctttcg caatattggc ggtagggtta aacggtatca
    11101 tttcacggtg tacggcaaac atcataattt cattatgttt ttgaattgcc cgttttaact
    11161 tctctagttt gccctcgtct tggtattgct tgaatgcctt gattgccatt ggtgcggtta
    11221 tttgtgtgat aggcattctt ccaaagtgcg gcaagaggtt atttttaatt aaggcgatta
    11281 catctttttg gtagttgtct gaaaaattct tcttggtctt gcggtgttcc agccacgccc
    11341 acgctacatt ttcataagtg ttgctgattt cgttggcctt tgcctgttcc tgttgttggc
    11401 ggtgggtttg agggtcgata ttttgagcca ataatgccct atattcttct ctaatttctc
    11461 tcgcttgtgc taaagaaata tcagggtaag ccccaatgct taaatcattc cgcttttttg
    11521 tgaacggtct ttcataccta aaccgccaca atttagaatt tgaggtaata acaagtagta
    11581 agccgttacc gtctcttaat gggctgtctt ccggtttcgc ttttcttatt tgggtatcgt
    11641 ttaacggtgt gatttttcta gccatagtaa acctttagga gtataaagcc taaatcttag
    11701 gagtatgatt ttttgtttgg gagtacaaaa ctaaaagcga taaagcctta tttgaaaagg
    11761 ctctaaagtg gttttaggag tacgaatttt tgggggtatt ccggcgtact cctaaatata
    11821 ctcctaaaat cttcggattt gattgtatcg tataggtacg caacggacaa taaaaaagcc
    11881 ttgaaacatt gattttcaag gctttttagg tatcggttga accgtatagg attataattt
    11941 ggtggagctg gggggatttg aacccccgtc cgaaatttct ctaccttcag tactacatgt
    12001 ttagtctagt ctttaatttc gcttattcac agcggacaga cacgcaatga ataaactagc
    12061 tttatttaat ttagtgtttc gatcctaaag cggcggcgtc cacacgatct cgttttgggt
    12121 gacttatctt tgccctcgtc ttacgagcgg aagctgagga gataaggctt taaagcaggt
    12181 tattaagctg ctaaagcgta ttgttcgtcg tttgcgacta ttattttgcg gtttgtttac
    12241 gaggcctacc gcacctcgac atgcaccttg ggcttcgcca atcccgtcga atccaaaatc
    12301 agccccaaaa gtagcggtat tctaaaggaa agcggtcgaa tttgcaaaaa gttttgcaag
    12361 tggcggaact tagcggtatt gaatagctcg aaataaaatc atacaaatcc cacaccagat
    12421 agatttaact ctgttataat gtaaaccttg ctgagagtga agagaaatag aatgaaaaaa
    12481 tttaacgaga acgagattga agatgctgaa attatagatg ccgagccgat tgatgttgat
    12541 gagatagacg aagaagaaac atcggtagaa gcaatgcatc cggctttggt ttccggctca
    12601 atgcctgtgc cgcagggcaa tttggatagc tacatccgaa tggcaaatca gtatccgatt
    12661 ctcaccgccg agcaagaaaa agaactggcg gagcgttatt attatgatga agacgttgag
    12721 gcggcaaaac agctgatcct ttcccatatg cggtttgtga tccatattgc tcgtggctat
    12781 ttgggctatg gtttaccgct ggcagatctg atccaagagg gtaatatcgg cttgatgaaa
    12841 gcggtaaaac ggtttgaccc gaatgtcggc gtgcggttgg tttcttttgc ggttcattgg
    12901 gtgaaagcgg aaattcacga atatgtgctg aaaaactggc gaattgtgaa agtggcaacc
    12961 accaaagctc aacgtaaatt attctttaat ttacgcaaaa ataaaaaccg cttggcgtgg
    13021 tttaatgaag aagagatcaa aaaagttgcc gatgatttag gggtttcagt ggaagaagta
    13081 cgagaaatgg aatctcgaat gaccggacaa gatttaggtt ttgacctgcc tgccggtgat
    13141 gacgatgaag acagctacgc tccttctatg tatattgaag atagcagctc caatttcgcc
    13201 gatgacttgg aagacgaaca acataatggg caggcaaccg ctcaacttgc ctatgcgtta
    13261 gccacccttg atgaacgtag ccaagacatc atcaaaaccc gctggttaga tgacaataaa
    13321 gccacactgc aagatttagc cgataaatat aacatctcgg cagagcgggt aagacagctt
    13381 gaaaatgccg cattgaagaa aatcaaggaa gcgatttcat tagacggcta gaaatgccta
    13441 caagcggtga tttttttact cgctacgctc gcacttcgtg ccgtcggcag agccaacgtt
    13501 caaacgcaag cgtttgtgca aaattttacg caaaaagcac cgcttgtatt ttgactaaaa
    13561 atgaggatac tatgattaac attaccgata aacaaattga cccaactttc taccagcgtc
    13621 taccagcgag cagacggctt tattaacgtt gccaacgctc atttaaaaaa cattgcccca
    13681 aaccaagtca gcaatgcgat gttgtttggt tgtgccagat ttaacgccta tgttgcggca
    13741 agcaaggcgg aatataaaca gcagttggcc gattccagag aagaagttat tcaatatttt
    13801 gtggagcaat acaaagaaat gctcactgca aatttagatg aatatatcca aaacttcgag
    13861 cgatatattg aagggaaaaa ggcggattaa ccgcctttgt tttgtggtca aacttgtttt
    13921 acaaaatcac ttaaaacttg attaattcta ctttgccaac ctttacctga agctctaaag
    13981 gcttcaagaa cgcttttatc aagacgtaac gaaaccaatt ctttctttga accagctggt
    14041 ctgccacgtt ttttcattgc aattgaaaac tctgatggcg taaccgggcg ttcatcgtca
    14101 tcttttccgt cccaaataaa atcttggctt gccggaatag cttgaatagc cataagtagc
    14161 tgttttttct ctaaattttt attattcaaa gtattgttgt aagtattcct aatatgcctc
    14221 tctttctgct ttagatgctc gccgaaagct aattactctg atgtaatctt ccctttctgt
    14281 atatgcaagt gataatacga gtaaacgtcc aaatgaatat gcaaaagatt gtattctaaa
    14341 ttcattgtta cgaataactt caacatcaaa tcgatagggc gatgagagaa cttcatctgc
    14401 atcggcaaaa tctaatccgt gcttggctaa attgattttg cgtttagttt cgtcccaagt
    14461 ataaattttc ataattattg tatatacata aaataaatct aacaagaact aaatttaatt
    14521 tagcaaacag taatttgaaa atcagattag aaatacattt tttcgatgca gatcgcaaaa
    14581 ataaaatgaa atttaactgc ttgaagagtc tactgagcca ttttccccgc taccgttaaa
    14641 aaaccatctg cggttttaaa aatttcaccg aatccttgag cctccaaaat ttggtcggag
    14701 acttcacgaa acgccccttc accaccggct ttttgcaata cccaatctgc tttttctttg
    14761 atgtaatcga gggcgttacg ggttgcaatc gcaatgccac acacttcaaa agccggtaaa
    14821 tctaaggtgt catcaccaat gtaagccgtt tgctcagggg taacaccggc ttgctgcatt
    14881 agctcaaagc aggcggagcg tttttccatt ttgcctaaca aagcgagatc aattttcagc
    14941 acctctaacc gtttgcggag caaagccgta tcgccgcccg agagtactgc cactttaatg
    15001 ccacaacttt gtaacatctt aacgcctaaa ccatcgtgaa cgtggaaacg tttcattact
    15061 tcgccttggt cggtgtagta cattccgcca tcggttagca cgccgtccac atcggtaatc
    15121 actaatttaa tcttggtgag atctaacatt tttttgcctc aaatatggta tgattttacc
    15181 attatagctt ttttacctcc gtttaccaaa ggaaccgaaa tgtcgattgc cgagaattta
    15241 tcgcaaatcc atcaacaaat tcagcaaatt tccgaacaat atcaacgaga taacgtgcgt
    15301 ttgttagccg tctccaaaac taaaccagtt gaggcgattc aagcggcgat tgaggcaggg
    15361 cagcgtgcat ttggcgaaaa ttatgtgcag gaagcggtcg aaaaaatcga attttttgca
    15421 aatcgccccg aattagaatg gcattttatt gggccacttc aatcaaataa aaccaaattg
    15481 gtcgctgcct attttgattg gattcaaacg gtggatagat taaaaattgc cgagcgttta
    15541 aacgaacaac gcccagcgga taaagccccg ctcaacgtgc tgattcaaat taatatcagc
    15601 gatgaagcct cgaaatcggg cattgaacca gatgaaatgc taccacttgc ccaagcgatt
    15661 tctcaattac cgaatttgaa actgcggggc ttaatggcca ttcccaaacc agaaagcgag
    15721 ccagagcaac aaaaagttgc ctttcgcaaa atgcagctac tttttaaccg cttgcaaaca
    15781 gaatttgacg acattgatac cctttcaatg gggatgtcgg acgatatgca agcggcgatt
    15841 gaatgtggct cgacaatggt gcggattggg actgcgattt ttggggcgag acgttagcca
    15901 gctgagtttt tacataaagc tgatacaagc ggtcaaattc gccaaaaact ttgcaaattc
    15961 caccgcttgt tttgtagcca acagcggaaa aagtctgtat aattacgcct cctaatttct
    16021 tgactctcgc cagttttgat gggcgagagt ttttattttg acttaactta aagatattcc
    16081 aatgcaaaat gtagatattt caaaattgcg taacattgca attattgccc acgttgacca
    16141 cggtaaaacc accttggttg ataaactttt acaacaatca ggcacctttg gtgaaactcg
    16201 tggtgacgtt gatgagcgtg taatggattc caacgatctt gaaaaagagc gtggcattac
    16261 cattcttgca aaaaatacgg caattaactg gaatggttat cacatcaata tcgtagatac
    16321 cccagggcac gctgacttcg gtggtgaggt tgagcgtgta ctttcaatgg tagattctgt
    16381 tctgttagtg gttgatgcct ttgatggccc gatgccgcaa acccgtttcg tcacgcaaaa
    16441 agcgttcgct cacggtttaa aaccaatcgt agtgatcaat aaagttgacc gcccaggtgc
    16501 tcgccctgat tgggtggtgg atcaagtgtt cgacttgttt gtaaatttag gtgcaagtga
    16561 tgagcagtta gatttcccaa ttatctacgc ttcagcctta aatggtgtag caggcttaga
    16621 acacgaagac ctagcggcag atatgacccc actttatgaa gcgattgtca aacacgttca
    16681 accaccacaa gtggaattag atgcaccatt ccaaatgcag atttcgcaat tagactacaa
    16741 caactatgtg ggcgttatcg gtattggacg tatcaaacgt ggttcggtga aacctaacca
    16801 agcggtaacg attgtagata gcgaaggcaa aactcgccaa ggtcgtatcg gtcaggtgtt
    16861 ggggcattta ggtttacaac gttttgaagc aacagaagcc tttgctggcg atattgttgc
    16921 gattactggt ttaggcgaat taaatatttc agatactatt tgtgatatta acgcagtaga
    16981 ggctttacca gcattaagcg ttgatgaacc aacggtaacg atgttcttct gcgtaaacac
    17041 ctcgccattc tgcggtcaag aaggtaaatt tgtgacttca cgccaaattc ttgagcgttt
    17101 aaacaaagaa ttagtccaca acgtggcatt gcgtgtggaa gaaacttcga acccagacga
    17161 attccgtgtg tcaggtcgtg gcgaattaca cttatcggta ttaatcgaaa atatgcgtcg
    17221 tgaaggttac gagttagcag tgtctcgccc gaaagtaatc taccgcgaag aagacggcaa
    17281 aaaacaagag ccgtttgagc aagtgacgat tgatatcgaa gagcaacacc aaggttcagt
    17341 gatggaagca cttggtatcc gtaaaggtga agtgcgtgat atgattccgg acggcaaagg
    17401 tcgtacccgt ttagagtatg tgatcccaag ccgtggctta atcggtttcc gtaacgaatt
    17461 tatgacgatg acctcaggta ctggtttact ttactctaca ttcagccact atgatgacgt
    17521 aaaaccgggc gaaatcggtc agcgtaaaaa cggtgtgtta atttctaacg caacgggtaa
    17581 ggcattagca tacgcattat ttggcttaca agagcgtgga aaattaatga tcgaccacgg
    17641 tgttgatgta tatgaagggc aaattatcgg gattcacagc cgttcaaacg atttaaccgt
    17701 aaactgctta cagggtaaga aattaaccaa tatgcgtgca tcaggtaaag acgatgccat
    17761 cgttttaacc acaccggtgc gtttcactct agaacaagcg ttagagttta ttgacgatga
    17821 cgaattagtg gaagtaacac cacaatcggt gcgtattcgt aaacgtttat taactgaaaa
    17881 cgaccggaaa cgtgcaagcc gtactacaac cagtaccagc acgcactaac tgataaaaaa
    17941 gagcgactga ggtcgctctt ttggttttaa attctcccta caaatataac gccattacca
    18001 ccgcattttc tttgctaccg tttggcgtgg ggtaatagtt tttgcgggtg gtaacttcat
    18061 taaaaccgag tgaatcgtag agttttctgg cagaatggtt ggattctcgc acttccaacc
    18121 acagggtggt gagtttccgt tgttgcagtt gcaaaattaa ttcggaaagt aaccgcttgc
    18181 caatgccttt gccttgaaaa tcaggagcaa ctgcaatgtt aaataaggtt gcttcatcta
    18241 gcacgatatg actaatggca aaagccacaa ttttgttttg ctctaccact tttaaattca
    18301 ggtatttttc accctgatta tttaataacg tcccctttga ccacggcact aaatgggctt
    18361 gttgctcaat ttcaaataac tgctcgaaat cttccgcttg aatttgctca atcacgctgt
    18421 tctccaaatt gtgccgaaaa agtatcaatt tgttgccaaa gttggcgttt ggtcgtagat
    18481 ttggctaaat cttgccaaga ctcgtttttc caagcggtct gattagtaaa actttttgcc
    18541 attttgaccg cttgttcttc cgcttgaatc agccaaaaga tcggcgaatg ctcaaacacc
    18601 aaacgttgtg attgttcgcc agtcagccat tgatattcgc tgttttttaa ctttaaagca
    18661 cgcagaatat cggcaaagag ccggctgtgt tggtgatctt cctcacacac taccaccaat
    18721 tttaccgcat tgtttaggcg gatttgagca tcgcctttta gcacttgggg attggttagc
    18781 acccattgcg aaatacccat ttcctgtaac agtaaatcac gacgattcat ttaaaacctc
    18841 atcaaatttt gcaaatagta tcaaaactcc gcttgaacag aaactttttt caaaaaattc
    18901 aagatttctg tacttaaatt cggtatattc acgctaaatt ttttagataa ggtaagaaaa
    18961 tgctctcttt agaaagcgaa gtacttgaac gccatttggc gttatttgaa aacaagtcgg
    19021 tgttattatt tggcgatgtg cgagatgatt ttgcccgcca gctgcaatct cgtgcggaaa
    19081 aggttgcggt attcagtagc tattttgatt acgcacgcca ccatagtgag gttgaatttg
    19141 gcttagaatg tggtttgagt gccgagttag cggtgtttta ttggacgaag aacaagcagg
    19201 aatgccaatt ccaactgcta caatggctgt cgcaatgcca agcagggcaa gaaatgttga
    19261 ttatcggcga aaaccgagct ggtgttcgtt cggtagaaaa actgctcgaa ccgttcggca
    19321 atattgccaa aatcgactct gcacgccgtt gtggtttata ccattttgag ctacagaccg
    19381 tgccgacatt cgattgcaaa aaattctgga aatcctaccg cttgcaagac ttagatgtgt
    19441 tcgatctacc agcggttttt agctcggcgg agctggataa cggcaccaaa ttattgcttt
    19501 caaccttcga caaagcagac aggctaaaag gcaaagtgtt agatttaggc tgtggggctg
    19561 gcgtgattgg ggcaacgctc aaacaacaat ttccgaaaat caaactgacg atgagcgata
    19621 ttcacgcaat ggcgttggaa tccggcagac gtactttggc ggaaaatcag ttagaggggg
    19681 aagtggtagc aagtgatgtg ttctctcaca ttaatgaacg gtttgattta attgtctcca
    19741 acccaccatt ccacgacggg gtcgataccg cctaccgagc ggtggaggag ttgattttcc
    19801 aagctaaaaa tcacctaacc aaaggcggtg agctgcgaat tgtcgcaaac gcattcttgc
    19861 cttacccaga tttgctcgat aaagccttcg gcaaacacga cgtactggca aaatccacca
    19921 agtttaaggt gtattccgca agaacataat aggcagaaca aacggttata aaaaagccgg
    19981 tatttgctta aaaaagtgct tgatatttct gccggcttga cgtaaattct gttcatactg
    20041 ttttggagta atgcaatgaa tttaaactac actttacatc accaccacac tttaacctga
    20101 tatctttcgg gcatttggtg tgtgcggaag ataactcttc cgagcaagtg tagcaaatca
    20161 ataaagatct ctcggaaggc aactttcgag agattttttt atagataaaa tttgggaata
    20221 atatgaaaaa cccgattgaa atttaccaaa gccaagacgg caaaacccaa gtttccgtgc
    20281 agtttgataa ggaaacggtg tggctaagtt tacagcaaat ggcagatatt tttggacgag
    20341 ataagtctgt tatttctcgg cacttacgaa atatctacca agaaggtgaa ctggagcgtg
    20401 aggcaactgt tgcaaaaaat gcaacagttc aaattgaagg tgctagagaa gtcgttcgcc
    20461 taaaagacta tctggtgaaa ggctatgccc ttaacgaacg ccgtttgcag gaacgaggta
    20521 tcgagtttga gcaggtgatt ggtttgctca gtcaatacac tggttgtctt agccttgttg
    20581 gtggcagaaa gtttgcctga acaaaaagaa ctgatgatta aactgattga acactttatt
    20641 ttattaaaag cataacagga aaaaatatga gtattaatat ttcgccgtta gcctccaaaa
    20701 atctcactga atggaaacta ttgtggcaac aatatttaga tttttatcaa gtgaatttag
    20761 cagatgatat tattcaatca acttggcaga aagtttcaga gagtgaaaat gtaaagggat
    20821 ttggggcttt tgttgataac agaatggttg gttttgttca tattgtgatt cacccaaata
    20881 cttggaattt aactgaatgc tgttatttgg aagatttatt tgttttagct gaatatcgca
    20941 accaaggcat aggaaaagaa ttaattgaat atatttatcg atatgcacag gaaaaaggat
    21001 ataaccgagt atattgggta acagataaaa acaatcatca agcacaacag ctttataata
    21061 aattagctaa tgatagcggt attattcaat atcgaaaaaa tttctaaact atgtataaat
    21121 tatacaggaa cacaatatga caatttcaca actttcccgt aaaaacattc aagctctcac
    21181 cccttaccaa tcggcacggc gtttgggggg tagtggcgat gtgtggctga atgccaatga
    21241 atatgccctt tcgccaaact ttgatttaac cgaccgcact tttaaccgct accctgaacc
    21301 tcaaccgcag gcggtgattg aaggttacgc ccgatatgca ggcgttgcac ctgaaaacgt
    21361 gctggtttcc cgtgggggcg atgagagcat tgagctgatt atccgagcct tttgcgaggc
    21421 aaacgacagc attctctact gcccaccaac ctacggaatg tacgccgtga gtgccgacac
    21481 ctgtggcatt gcgaccaaaa ctgtgccttt aaccgccgat ttccagttgg atttagccca
    21541 aatcaaagct aacctcgagg gcgtgaaagt ggtgtttgtg tgcagcccga acaacccgac
    21601 aggcaactta atcaagcggt cggatttgtt cgaacttttg caaatcaccg caggcaaagc
    21661 gattgtggtg gtggacgaag cctacatcga attttgccct gaagctcgct tggtaagcga
    21721 gctggcgaat ttcccacatt tggcgattat ccgcacccta tccaaagcct ttgccttggc
    21781 gggtttgcgt tgtggcttta ccttggcaaa cgctgagctg atcggcgtgt tacaaaaagt
    21841 gattgccccg tatccgctgc ctgtgcctgt ttccgacatc gccgcccaag ccctctcccc
    21901 acaaggcatt gagcagatga aaacccgtgt ggcggaagtc atcaccctgc gtgccgaatt
    21961 gcaaaaaaat ctggaaaact taccgcttgt agaacaagtt tttgacagcg aagccaacta
    22021 cctcctattc aaatgccaag acggacaaaa agtcttcaaa gcactttggg agcaaggcat
    22081 tattttgcgt gaccaacaca aagcgttagg attgcaaaat tgcattcgga ttacggtggg
    22141 ggcgagagag gagaatttga gggtggttga ggcgattaca gcactgagcc aatttcagag
    22201 atagaattta acgagcagta ttttaagaga catttatagc ctagcacggc atagccgtac
    22261 taggttacgc ataagtcagt ccctttggga ctgaatacag agaggcaaag tctctcacta
    22321 atgcttaacc ccatatgcct tggcgtgtgg ggagagtaat gaataagata cagatacagg
    22381 agaaaccaat gcaacccacc ctttttatcg accgtgacgg cacgttaatt gatgagccaa
    22441 aaaccgattt tcaaatcgac agcttggaaa agctgaaatt cgagaaaaac gtgattcctg
    22501 ccctgctcaa actcaagggc aaataccgct ttgtgatggt tacgaaccaa gacggcttag
    22561 gcacgagttc gttcccacag gcagatttcg acaaaccgca caatgcaatg atggcgttgt
    22621 tcaactcgca agggattgaa tttgatgatg tgctgatttg tccacacaag cccgaagacg
    22681 gttgcgattg ccgcaaaccg cacaccaaac tgctacaaaa atatatcgac cgccaactgt
    22741 tcgacccagc caacagcttt gtgattggcg accgtgctac cgatgtgcaa ctggcggaaa
    22801 accttggcat tcgggcgttg caatatcacc ctgaaaaact gaactgggat ttgattgctg
    22861 aaaaactact gggcgaagcc gtcaccaaca ttggcgagcg accaaagcgc tttgccgaag
    22921 ttatccgtaa aaccaaagag accgacatca aagtgcaagt gtggctggac gaaacaggca
    22981 acaacgaaat cagcaccggc gtgggctttt tcgaccatat gcttgaccaa attgccaccc
    23041 acggcggttt tagaatgaac atcaccacca aaggcgactt gtggattgac gaacatcaca
    23101 cggtggaaga caccgccctc gccctcggca ccgcattaaa acaagcgatt ggcgacaaac
    23161 gcggcatcgc ccgtttcggc ttcgtgttgc cgatggacga aagccgtgcg gaatgtgcga
    23221 tggacttatc aggcagacct ttcatcaagt tcaaagcgga tttcaaacgc gacaaagtgg
    23281 gcgatttcag caccgagctc accgaacact tcttccaatc catcgccttc acgatgctcg
    23341 ccaccctgca catcaaggca aaaggcgaca acgaccacca caaaatcgaa agcctgttca
    23401 aagtcttcgg cagaacactc agacagtgca ttcgtattga agggaatgaa ctaccaagca
    23461 gtaaaggtgt attataatca ccgtaggggc gggttttaac ccgcccgaaa gtgcggttga
    23521 aatttgcaaa gtttttgggg attttgaccg cttgttataa aggatatatt gatgattaga
    23581 gaagttattg actttataaa gaataataaa tggtatgttc tgttagttgt attgttatta
    23641 ggattatatt tttatcagtt tcacggggga ttatcctcag atagtgaaaa atgggatcat
    23701 tttggtagct atattggtgg tatattttct gctgttactt tattgagtgt tttgcatgga
    23761 atgcagttgg aacgtaaaag atttaaggag caaaaagaag aatttgaaaa tgacaaaaga
    23821 gtattagaaa agagaagaag aaaagaagat ttttagcgta cattttttat gatgttagag
    23881 cagcataatc ttaaaatttc atcaatagaa ggtaatattg ataatgttta tgatatgcta
    23941 attacagcat atagatttga aaatgctagg atttattgtg aggtaggaag attaa
//
LOCUS       DANLZQ010000021        23369 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.021, whole genome shotgun sequence.
ACCESSION   DANLZQ010000021 DANLZQ010000000
VERSION     DANLZQ010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 23369)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23369)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23369
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.021"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            80..322
                     /locus_tag="PXE50_000849"
     CDS             80..322
                     /locus_tag="PXE50_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015433650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HDL5621780.1"
                     /translation="MSDKSIILEIINALGNKENIKQVEACLTRLRVVLHNNGLLNKSA
                     LKKLGAVDVIKVGDTQQIIFGAKAGQYRDEINALIG"
     gene            complement(366..1190)
                     /locus_tag="PXE50_000850"
     CDS             complement(366..1190)
                     /locus_tag="PXE50_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HDL5621781.1"
                     /translation="MNGPTQLAHFQEQIRKEYDGLSKRLKQVAQYVLDNGNSVVFDTV
                     STIAERADVPPSTLIRFANAFGFSGFNEIKQLYRQDMMEGTSRYTERVQLFRQIEPLD
                     EQNSELNHILDVFVQGNTQALQQLSTQVSEEQLAQTVDILHNAKRIFIVGLKRSFSIA
                     NYLNYALHHLDYDVFMIDGSGGMFDEQLSRIREGDAVIAVSFSPYANETLNVVTATAR
                     PGVKHIAITDSQLSPLLSFSDVSFIIKEAQVSGFRSQCATMTLAQTIAVSLALKKA"
     gene            complement(1328..2668)
                     /locus_tag="PXE50_000851"
     CDS             complement(1328..2668)
                     /locus_tag="PXE50_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HDL5621782.1"
                     /translation="MSVSQRFIDFMNAHVAPVARRMENQPHISAIRDGFIVVLPFLIV
                     GSFIMILLIPPFDENTQNAFGQAWWRFANWASPYGWNFFQMSFNAISLFTSASIAYNL
                     AKAYKREPLPAAFLSVMAFLLVAAPVKDGMMDIKFFGGIGLFSAIFIAIYSVEMTRLL
                     EFLKIKIRLPKEVPHAVAESLNIVIPILAILLTLYPFAIWVESATGRNIPQLIMDFMA
                     PLIAVSDSLGAICLFVIATHLLWFLGINGSLVLMQLWTPFLLQNMAANLAAFQAGEPL
                     PFIITNSFWDFYIVHGASGGVIALAFLLVRSKSAHLRSIGKIGLVPSFFSIGEPIVYG
                     VPMVVNPLFFIPLIFAPLANAVIAYLILDFNLIHRVYLMAPWTTPAPIGAYLVSAGDI
                     WAPILSIALIILDIVIYYPFFKMYEKVCVEKEKAQNLDEKAQQELLEKARMAAQ"
     gene            complement(2671..4011)
                     /locus_tag="PXE50_000852"
     CDS             complement(2671..4011)
                     /locus_tag="PXE50_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-L-fucosidase"
                     /protein_id="HDL5621783.1"
                     /translation="MSCNTSPKRFHASWESIKQHQVPEWYEDAKFGIFIHWGIYSVPA
                     FAPPTCQLGEIDIDEQWFCNNPYAEWYFNSINVKKGPTYEHHIKTYGESFAYNDFLPL
                     WKAEKWQPAEWAKLFAKAGAKYVVLTTKHHDGFCLYPSKYTDFNCMQAGPKRDLMGEL
                     TENVREQGLKMGAYYSGIIDWTYSSAPIFTESQNFSNACPTYEYADYAYKQVVELIDR
                     YKPDVLWNDIGWPKVGEHMLPHLFAHYYNSVQEGVVDDRWNKLWCDFTSKEYKHGVAS
                     RDKKWEMCRGMGLSFGYNQVEDESHLISVKDLISLLVETVADNGNLLLNIGPKADGTI
                     PQEQVERLLALGSWLEINGEGIYKSRCSQHQTEQIGDVTYRYTKVGADLYLYIDGLTE
                     AQISLPLSVYGELQALNTELKFTIENTAQGRVLHIQNYQPDWYVLGFKIADGEK"
     gene            complement(4300..6216)
                     /gene="iolC"
                     /locus_tag="PXE50_000853"
     CDS             complement(4300..6216)
                     /gene="iolC"
                     /locus_tag="PXE50_000853"
                     /EC_number="2.7.1.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-dehydro-2-deoxygluconokinase"
                     /protein_id="HDL5621784.1"
                     /translation="MATVNHQDRPLDLICLGRVAVDFYGQQIGSRLEEMTTFSKYLGG
                     SSGNVAYGTAVQGLRSSMLARVGDEHMGRFLREELQSVGVDTSHLITDKERLTALVIL
                     GIKDKETFPLIFYRDNCADMAITKDDFSEAYIASSRCLAITGTHLSNPKTREAVLTAL
                     EYAGRNEVKRALDIDYRPVLWGLTSLGDGETRYIDSAEVTKSLQEVLHHFDLIVGTEE
                     EFHIAGGSTDTLTALKNVRKVSNAVLVCKRGALGCSVFEGELPNDLDGGLNVYGVRVE
                     VLNVLGAGDAFMSGLLRGYLNNEGWEQACHYANACGALVVSRHGCSPAMPTKRELDDY
                     LTRAESVPRPDLDERLNHLHRVTTRKKQWENLCIFAFDHRKQLVDMANKVGADLARIP
                     KLKQLLLKAMEQTATQSGLPQNQAGILADTTFGQDVLNEITGKDYWIARPIEEPSSRP
                     LELEYGDLGSQLASFPRDHVIKCLAFYHPNDESGLKARQDRKLKEVYQACCRTGHELL
                     LEIILPADMPQSEAFYNQAIAHFYQLGIKPEWWKLPDVSRAQWQAISATIEANDPDCR
                     GILILGLDAPLEVFKDTFEQAKGCEKVKGFAVGRTIFGEPSEKWLAGELDDNTLISAV
                     SEKYRTLIDLWQQR"
     gene            6484..8418
                     /gene="iolD"
                     /locus_tag="PXE50_000854"
     CDS             6484..8418
                     /gene="iolD"
                     /locus_tag="PXE50_000854"
                     /EC_number="3.7.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015433647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3D-(3,5/4)-trihydroxycyclohexane-1,2-dione
                     acylhydrolase (decyclizing)"
                     /protein_id="HDL5621785.1"
                     /translation="MQTTRLTVAQALVQFLDNQYLDVDGKEIKFVHGVAAIFGHGNVL
                     GIGQALAQNAGGLTLYQGRNEQGMAHLAMGFAKQNLRQRIIACTSSVGPGAANMVTAA
                     ATATANRIPLLLLPGDVFATRQPDPVLQQIEQPYDLSISTNDAFRAVSKYWDRVQRPE
                     QLMSACINAFRVLTDPAETGAVTIALPQDVQAESFDFPNSFLQKRVHRLERTPPTTAM
                     IKQAVTLIQTKKKPLIVCGGGVRYSQAGQILQKFAKQFGIPFAETQAGKSAVVSDHAL
                     NVGGVGETGCLAANRLAKEADLVIGIGTRYTDFTTSSKWIFQNPNVQFLNINVARFDA
                     YKLDGVQLVADAKTALEALSQAIPTDYQAQWENEISQAKADFADEIQRLRAVQYHPDF
                     TPEINDNLDHKAVHNEFIQLTGSQLTQTQVLGIVNETIDNNAIIVAAAGSLPGDLQRT
                     WLSKGEETYHLEYGYSCMGYEVSAAVGVKIARPEQEVYALLGDGSYLMAHTELVTSIQ
                     EGKKINVVLFDNMANGCINNLQIGNGMDSFGTEFRFRNGETNQLNGGLVPIDFAKNAE
                     AYGCKTYRVTNEAELRAALDDAKKQTVSTLIDIKVLPKTMAHGYGCWWHVGVAEVSES
                     ERIQQARQRSEEQLAKARKY"
     gene            8545..9441
                     /gene="iolE"
                     /locus_tag="PXE50_000855"
     CDS             8545..9441
                     /gene="iolE"
                     /locus_tag="PXE50_000855"
                     /EC_number="4.2.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011817366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="myo-inosose-2 dehydratase"
                     /protein_id="HDL5621786.1"
                     /translation="MKAENIQLGIAPIGWTNDDLPELGAENTFEQCVSEMALAGYTGC
                     EVGNKYPRDVAVLKHKLDVRGIQICNAWFSTFFVDGKREETIAEFIKHRDFLHAMGAK
                     VIGCSEQSRSIQGTTKSVFKEKPIFNDEDWKRMAEGYNELAKLAAEKGMKVCLHHHMG
                     TGIQTPEEVDRYMAEVNDDVYLLFDSGHLYYSEGCQKAMLGVLEKYIDRIIHVHLKDV
                     RDEVMAEVKAKDLSFLEGVKKGTFTVPGDGVIDFRPIFDILEKHDYKGWMVVEAEQDP
                     ALANPFEYALKGRKYIRETAGV"
     gene            9443..10453
                     /gene="iolG"
                     /locus_tag="PXE50_000856"
     CDS             9443..10453
                     /gene="iolG"
                     /locus_tag="PXE50_000856"
                     /EC_number="1.1.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005537901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol 2-dehydrogenase"
                     /protein_id="HDL5621787.1"
                     /translation="MLKVGIIGAGRIGRVHSESISKYVKGAEIKAISDVKITEELTAW
                     AKSMGIPEVYDDYKKILQDPEIDAVLVCSSTNTHAPISIEAAQAGKHVFCEKPVDADP
                     AKIREVLSAVEKAGVKFQVGFNRRFDHNFKAIKDRVAAGDIGEPHVIRVTSRDPEAPP
                     IEYVKVSGGMFFDMTIHDFDMIRYLSGSEVEEVFAVGTVLVNPEIGKAGDIDTAVITL
                     KLKNGAIGVIDNSRKAAYGYDQRAEVFGSKGAIHITNDTGSTAVFSGENGVVAEKPKY
                     FFLERYMQSFADEISCFVDSVVNDKPTLVNGNDGLQPVLIALAAKKSLEENRPVKLSE
                     VA"
     gene            complement(10832..11254)
                     /locus_tag="PXE50_000857"
     CDS             complement(10832..11254)
                     /locus_tag="PXE50_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621788.1"
                     /translation="MSSIKEIFSTKNSPINVLMQTEWFLGFILIVVYLDAYFQLVHQV
                     PIYIAIQQKEIYLTKTIDYIAAIFFFSVTFTALFTMMRLLHIFILSDLLDKIGCNTYE
                     LPKIEDIHKYEMLSILKIQAAKENNAELRYYVKKKKKK"
     gene            complement(11324..12457)
                     /locus_tag="PXE50_000858"
     CDS             complement(11324..12457)
                     /locus_tag="PXE50_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015433643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDL5621789.1"
                     /translation="MKTIKIGLVGTGYIGRCHAIAYAQAPTLFPLKGKIQLEYLAEIN
                     QALADQKAREFGFQRATDDWRKLVTDPNVDVVDICTPNFLHKEIALEAIKHGKHVYSE
                     KPLALTAQDAKEMVIAAQQAGVKTLVGFNYIKNPTTQLARQIIQNGEIGEVVHFYGTH
                     NEDYLANPNTPIDWHCYKAKAGLGTLGDLAAHIVSIAHYLVGSDIERVIGDMQTVIEE
                     RPSPHNPAEKIKVENEDQASSLIRFANGVMGTLESSRISCGRKMGLTYVVTGTKGTLS
                     YTQERMAELKLYLHDDDKSRQGFKTILVGPEHPDYAAFCVSAGHGIGFNDQKAVEIRD
                     LINGIAADDPMYPDFEEGYKISRVLEAIAKSAEEKRWVEVSEI"
     gene            complement(12588..13616)
                     /locus_tag="PXE50_000859"
     CDS             complement(12588..13616)
                     /locus_tag="PXE50_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5621790.1"
                     /translation="MTTQFLKNMGMVDDKGKIDFIAFFERFGVLIFLILLIIFFTSQN
                     GAFLSQRNIYNVLTEVSIFGIMAVGMTFVILTAGIDLSVGSILAVTAMFAAYIIKGDN
                     TVTLEAGAWGGMSWLIGLSICLGLGTFIGWLHGLGVTKLKLPPFIITLGGMTIWRGLT
                     LVLNNGSPIAGFDEGYRWWGRGDILGVPVPVVIFAVVAIIGYFALHKTRWGRYVYSVG
                     GNPEAARLAGVNINRTLVSVYVVIGALAGLAGFILSARLGSAESVAGVSFELRVIASV
                     VIGGTSLMGGYGRVTGTIIGSIIMGVLINGLVLMDVSAYYQQIIMGLIIILAVAFDTY
                     AKSRRGAL"
     gene            complement(13628..15172)
                     /locus_tag="PXE50_000860"
     CDS             complement(13628..15172)
                     /locus_tag="PXE50_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HDL5621791.1"
                     /translation="MSTPLLEVKDLTKSFSGVMALNGVKLTVGKGEVHALLGENGAGK
                     STLLKALSGAQPQTSGEIIFNGETLSLSDSPFDRQLKGIVTIYQEFNLLPNMTVAENF
                     FLGREPVKGLFVNEKAVNEEAQLVLDNLGLNIKPDTQVSRLSVAQQQMVEIARAMTLN
                     AKLIIMDEPSAALSDKEVETLHQIVRDLKSRGISVIYVTHRLNEVFALCDRFTVFQDG
                     RYSGEGEVKNVNVDQIIKMMVGREVAFTRRPPEETHHTHRPIRLAVKNLHREKPAFDP
                     HGIALHGVSFNIHEGEVLGIAGLVGAGRTEIARCLFGVENYTADEISLDGKPYAATSP
                     LDALEKGVALVPEDRKKEGLVLGLPIKTNMTLPILSKLLKGNLFVDNQKEDDLIETYR
                     QALRIKMASSELEARKLSGGNQQKVILARCMALNPKVLIVDEPTRGIDVGAKSEVHQV
                     LFDMAKQGVAVLVISSDLPEIMAISDRIITLSEGRVTGEIHGDDATEEKLMSMMAVGV
                     QRKAAA"
     gene            complement(15223..16161)
                     /locus_tag="PXE50_000861"
     CDS             complement(15223..16161)
                     /locus_tag="PXE50_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HDL5621792.1"
                     /translation="MKKRIKFVLSALTLGLAMNSFAKDELVVFSLPNLSSPFEVQLQK
                     VAVETSKKLEIKLQVLDGQSSSTKQASDLENAITRGAKGIIISPNDVNAISGAVEEII
                     KEKIPAATLDRKVESSKPVPHFGANNYTGGQEVAKAVKAKYPNGAKIILLTGQPGSTS
                     NIERTKGIRDELAAGGDKYKIVVDQTGNWLRSEGLRIIESVLPTLKEKPEVIISANDD
                     MALGAIEALRSQGLKAGDILVTGFDSTPEALARVKDGWLYLTADQRPSFAVSTALEQV
                     VGNIRESKEVSGADYPPKIILKDNLQEAERFAEISE"
     gene            complement(16493..18004)
                     /locus_tag="PXE50_000862"
     CDS             complement(16493..18004)
                     /locus_tag="PXE50_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-acylating methylmalonate-semialdehyde
                     dehydrogenase"
                     /protein_id="HDL5621793.1"
                     /translation="MSQFVQNFINGAVVESQSQRVTSVFNPATGEETKKVKLSLPNEV
                     DAAIAAADQAFKSWSQQSPLRRARILFKFKELLEANFDELARLISSEHGKIYSDAIGE
                     LTRGLEVVEFATGIPHLQKGEFSANAGRGIDIHSIQQPLGVVAGITPFNFPAMVPMWM
                     FPVALACGNTFVLKPSEKDPSVSIRLAELLKEAGLPDGVFNVVQGDKEAVDILLTDSR
                     IQAVSFVGSTAIAQYIYEKGSANGKRVQALGGAKNHALIMPDADVQGTINALLGAAFG
                     AAGERCMALSVAVVVGDELADKIIEELIPKVKALKIGSGLLPQGVLENDMGPVISKEH
                     KAKIESYIDQGVAQGAKLCVDGRGYKVEGFENGYFVGGTLFDNVTPEMTIWQDEIFGP
                     VLSVVRVKDYAEGIALINSHQYGNGSAIFTADGDSARQFTQDVQAGMVGVNIPIPVPM
                     AFHCFGGWKASIFGPLNVYGTDGVRFYTRMKTITTRWPDSSVRSQAAFNFPTL"
     gene            18223..19047
                     /gene="iolB"
                     /locus_tag="PXE50_000863"
     CDS             18223..19047
                     /gene="iolB"
                     /locus_tag="PXE50_000863"
                     /EC_number="5.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-deoxy-glucuronate isomerase"
                     /protein_id="HDL5621794.1"
                     /translation="MSSPLLSKPNFNQHEGLIQHITPENAQWEYVGFDVYQLSKQQIT
                     LESGENELCLVFVTGFGSVYVDDYAFENIGNRTTPFEKIPPYAVYIPPHKSVLVKTEL
                     NLELAVCKAPSQGNYPVRLISPNHIGVEKRGFGNNQRLVHNILPETEAADSLLVVEVF
                     TDEGNTSSYPSHKHDDKHSTEETYLEETYYHRFDPPQGFAMQRVYTDDRTLDECMAVY
                     DKNVVKVPRGYHPVATIAGYNNYYLNVMAGPVRKWKFTWEQDHLWVNSETYKAKFE"
     gene            complement(19123..20574)
                     /locus_tag="PXE50_000864"
     CDS             complement(19123..20574)
                     /locus_tag="PXE50_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HDL5621795.1"
                     /translation="MPNHKFLLLRFQAYINGKFVSSQNGKTFTVQNPTNGEKIGEVAD
                     LGTEETAQAIEAAAVAQKKWQALLPKERSVILRKWFELIMQNQEELAQILSLEQGKPL
                     AESRGEIAYGASFIEWFAEESKRIYGDVLPQDKAGRRLFVTKQPIGVVAAITPWNFPN
                     AMITRKAAPALAAGCAIVIKPAAETPLSALALAQLADQAGIPKGVFNIITSSDVEGVG
                     RELSTNPTVRKLTFTGSTRVGKILMQQSAGTVKKLALELGGNAPAIVFDDADLDTAVE
                     GVFASKFRNGGQTCVCANRIYVQAGIYEQFLAKLSEKVAQIKLGSPFEEEVTIGALIS
                     ERAVEKVESHINDALSLGAELVLGGERHALGGTFFQPTILKNVTQAMKVAREETFAPL
                     APIFKFETEEEVIQWANDTEFGLAAYLFSQNIGRIWRVSEQLEYGIVGINEGIISNEI
                     APFGGWKESGLGREGSKYGIEEFLEIKYLCMKV"
     gene            complement(20752..22062)
                     /locus_tag="PXE50_000865"
     CDS             complement(20752..22062)
                     /locus_tag="PXE50_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HDL5621796.1"
                     /translation="MIYAEIFVVLAAIYLGLRSGGLGIGLYGGLGLAILTLGFGLPMG
                     SIPVDVMLIIMTVVIGAAVLQAVGGMDLLVRYAEVLMRKNPKYINFIAPMITWLMTIM
                     AGTGFIVFSTLPVIAEVAKESGIRPSRALAGSVVSSQLAIAGSPLSAAMAAMIAVMEN
                     NSVTFFQVIAVCLPVSFIASMVAAFVASKQGCELQNDVVYLERLKAGIVSPSRKLASE
                     STYSKGAKLSIGIFLLATVLVVLLAAVPGLKPVYENGKSMSTRDIIIVMMLASSCLMM
                     LVGKIKPDTIVASPIFRSGMTSIAVIIGIVTLGMTFVDAHLIEIKASIGNILTEYPML
                     LAVVLFFTCALLYSQGSTSALIIPLAVSLGIPNWAILASFIAITGIFILPTYPTSLAA
                     MELDTTGSTRAGKYIIDHPFMLPALVGVAVGLAFGFVWAPMIVS"
     gene            complement(22078..22773)
                     /locus_tag="PXE50_000866"
     CDS             complement(22078..22773)
                     /locus_tag="PXE50_000866"
                     /EC_number="5.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid racemase"
                     /protein_id="HDL5621797.1"
                     /translation="MARNIIGILGGMGPAATADMFQKFIRLTPADCDQAHIPLLISSI
                     PDIPDRTRYILANGENPAPVMEKYIEGLESAGATCIIIACNTAHYWFEHLKAKSQVEM
                     LSMIDCVVDEVLKCGKWRVGLLATDATLAVDLYKKQLEAQGLTFICPTENGQKAVMDS
                     IYLLKSGELEKATELMLQQRDELIRLGAEVIILGCTEVPIILAQEIEREPMRYVDSTL
                     VLVKKAIDWYQTH"
     gene            22989..>23369
                     /locus_tag="PXE50_000867"
     CDS             22989..>23369
                     /locus_tag="PXE50_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL5621798.1"
                     /translation="MKNIETKWLEDFLTLEECRHFSQAAEKRNLSQSAFSRRILALEE
                     VVGVKLFDRTSIPLQLTEQGKLFHSQTRNLLQQLQNNLDELLGHNCNLPNIKFAAAHS
                     LSLSIMPKLIKKLSQTNENFIYSVE"
BASE COUNT         6779 a         5229 c         4829 g         6532 t
ORIGIN      
        1 ataaaaattg ttctaaccat cagaaaatgt ttaaaatatc ataataagag ttttaaatat
       61 aaataggtat ggaggaaata tgtctgataa atctatcatt ctagaaatta ttaatgcttt
      121 aggaaacaaa gagaatatca agcaagttga agcttgttta acccgtttac gtgtggtgtt
      181 acataacaac ggtttattaa ataagtcggc actgaaaaag cttggggcgg ttgatgtcat
      241 taaagtcggt gatacgcaac aaattatttt tggtgcaaaa gccgggcagt atcgtgatga
      301 aattaacgct ttaatcggtt aatagacaaa gacctgtatt tacgcaggtc tttcactttc
      361 ttaatctagg cttttttcaa cgccagtgaa acggcaatcg tttgtgcgag cgtcattgtg
      421 gcacactggg atcgaaaacc actcacctgt gcttctttaa taataaacga cacatcgcta
      481 aatgaaagga gtgggctaag ttggctatca gtgatcgcaa tatgttttac ccccggtctg
      541 gcagttgctg tcaccacgtt gagtgtttca ttcgcatacg gggaaaagct cacggcaatc
      601 accgcatcac cttcacggat tcggcttaat tgctcgtcaa acataccgcc cgaaccatcg
      661 atcataaaga catcatagtc caaatggtgc aacgcatagt ttaggtagtt cgcaatgctg
      721 aatgagcgtt ttaaacccac aataaaaatg cgtttggcat tgtgtaaaat atctaccgtt
      781 tgtgctaact gctcttcgct gacttgtgtc gataactgtt gcagtgcctg cgtattaccc
      841 tgtacgaaca catctaaaat atgattgagc tcactgtttt gctcatcaag cggttcaatt
      901 tgacgaaaaa gttgcacacg ttcggtgtaa cgtgatgtgc cttccatcat atcttggcga
      961 taaagctgtt taatttcatt aaaaccgcta aatccaaacg cattcgcaaa acggattaag
     1021 gttgaagggg gaacatcagc tcgttcagca atggtagaaa ccgtatcaaa caccacgctg
     1081 ttgccattat ccagcacata ctgtgccact tgttttaaac gtttacttag tccgtcatac
     1141 tcttttcgga tttgttcttg aaaatgtgct aattgagtag gtccattcat ttcaaattat
     1201 ctctgcttga attttttatt tcattatacg cttttcttgt ttacaagcgg ataaattttg
     1261 tcaatttttt gcaaaaataa gggctaatct ttcgattagc ccctctcaat tacgctagaa
     1321 ataagtgtta ttgtgctgcc attcgtgctt tttctagcaa ctcctgttgt gctttttcat
     1381 ctagattttg tgctttttct ttctcgacgc agactttttc atacattttg aagaatggat
     1441 agtagatcac aatatccaaa ataatcagtg caatacttaa aattggtgcc caaatatcac
     1501 cggcagaaac cagatatgcc ccaatcggtg ccggtgttgt ccacggtgcc atcaagtaaa
     1561 cacggtgaat aaggttaaaa tctaaaatca ggtaggcaat aaccgcattc gctagtggtg
     1621 cgaaaatcag cgggataaag aacagcggat taaccaccat tggcacacca tacacaattg
     1681 gttcaccgat agagaagaag gacggaacca agccgatttt accgatagag cgtaagtgtg
     1741 ccgatttact gcgtaccagc aggaatgcca aggctattac accaccactt gccccgtgta
     1801 cgatatagaa atcccagaag gaattggtga tgataaaggg gagcggttca ccagcttgga
     1861 atgctgctaa gtttgccgcc atattttgca gtaggaatgg tgtccaaagt tgcattagta
     1921 ccaatgagcc gttaatgcct aagaaccaga gcaaatgggt agcaataacg aacaagcaaa
     1981 ttgcccctag cgagtcactc acagcaatca atggcgccat aaagtccata attagttgtg
     2041 gaatattacg acctgtggca ctttccaccc aaatggcaaa cggatagaga gtcagtaaaa
     2101 tcgctaaaat tggaatcacg atattcagag attctgctac agcgtgcggc acttctttcg
     2161 gtaagcggat tttaattttt aagaactcca acaagcgggt catttctacc gaataaatgg
     2221 caataaaaat cgcagagaat agcccaatac cgccaaagaa tttaatatcc atcattccgt
     2281 ctttgaccgg tgcagccact aacaaaaatg ccattaccga gagaaatgcc gctggcaggg
     2341 gctctctttt ataggctttg gcaaggttgt aggcgatact ggcagaggta aataatgaaa
     2401 tcgcattaaa cgacatttgg aagaaattcc aaccgtaagg gcttgcccaa ttcgcaaaac
     2461 gccaccaagc ttgcccgaaa gcattttggg tattttcatc aaatggcgga attagcaaaa
     2521 tcataataaa gctgccgaca attaagaatg gtaacactac aataaaaccg tctcgaatag
     2581 cggaaatatg cggttgattt tccattcgac gtgctactgg agcaacgtgg gcattcataa
     2641 agtcaataaa acgttgtgaa acggacatac ctatttctcc ccatctgcaa ttttaaagcc
     2701 taatacatac caatccggct ggtagttttg aatatgtaac actctgcctt gtgcggtgtt
     2761 ttcaatggta aatttcagct cggtattgag tgcttgtagc tcaccataaa ctgacagtgg
     2821 caagctgatt tgggcttcgg ttaagccatc aatgtaaaga tagagatccg ccccaacttt
     2881 ggtataacga taggttacat caccgatttg ctcggtttgg tgttggctac aacgggattt
     2941 atagattccc tctccattta tttccagcca gctccccagt gctaataagc gttcaacttg
     3001 ctcttgcgga atagtgccat ctgctttcgg gccgatattc agcaataaat tgccgttgtc
     3061 ggctacggtt tctaccaata gggaaatcaa gtctttcacc gaaatcaaat ggctttcgtc
     3121 ttctacctgg ttatagccga acgataagcc cataccacgg cacatttccc atttcttatc
     3181 acgggaagcc acgccgtgtt tgtattcttt ggaggtgaaa tcgcaccata gtttgttcca
     3241 gcggtcgtcc actacgccct cttgaacgct gttgtaataa tgagcaaata ggtgtggtaa
     3301 catatgctcg cccacttttg gccagccaat atcattccac aatacatctg gtttatagcg
     3361 gtcgatcagc tctaccactt gtttataggc gtagtcagcg tattcgtaag tcgggcaagc
     3421 gtttgagaag ttttgacttt cggtgaaaat cggggcagag gaataagtcc aatcgataat
     3481 gcccgagtag taagcgccca tttttaagcc ttgctcccgc acattttcag tcagctcgcc
     3541 cattaaatcc cgcttcggtc cggcttgcat acagttgaaa tcggtatatt tacttggata
     3601 gagacagaaa ccatcgtgat gtttggtggt taataccaca tatttggcgc cagctttggc
     3661 aaacagtttc gcccattctg ctggttgcca tttttccgct ttccatagtg gcaggaagtc
     3721 gttataggca aaggattcgc cataagtttt gatatgatgt tcgtaggtcg ggcctttttt
     3781 gacattgatg gaattaaaat accattctgc ataagggtta ttacagaacc actgttcatc
     3841 aatatcaatt tcacctaact gacaggtcgg tggggcaaag gcgggtacgg agtaaatccc
     3901 ccagtgaata aaaatcccaa acttagcatc ttcataccac tctggtactt ggtgctgttt
     3961 gatcgactcc caactggcgt ggaaacgttt tggtgaagtg ttgcaactca tacacagact
     4021 cctattgaat ctaaatagaa ctaaactgaa atacattttc cattttgata aaaataaaac
     4081 aatttgtttc gataaaaagg ggggggttta tgtatgaaat gtgaacttca tcacacttat
     4141 tttgtgataa gcagattgag gaatgcccga tattcgcttt tttaggaaaa ttcgggcatt
     4201 tttacggcta gcaagcggtc tgtttagccg gattttttgc aaaacaaaac cccttgctta
     4261 atatcataag ctaaggggtt ttcacttaaa gcaatatgat taacgttgtt gccagagatc
     4321 gattaaagtg cgatatttct ccgataccgc agaaatcaag gtattgtcgt ccaattcacc
     4381 ggcaagccat ttttcggacg gttcaccgaa aatggtgcgg ccgactgcaa agcctttcac
     4441 tttctcacag ccttttgcct gttcaaaggt gtctttaaac acctctaacg gggcatctaa
     4501 acctaaaatt aaaataccac gacagtccgg atcgtttgcc tcaatggtgg cggaaatcgc
     4561 ttgccattgt gcgcgagaaa catccggcaa tttccaccat tccggcttaa tgccaagttg
     4621 gtagaaatgt gctatcgctt ggttatagaa agcctcactc tgtggcatat cagcaggcag
     4681 aataatttcc aacaatagct cgtgaccggt acggcaacag gcttgataca cctcttttaa
     4741 cttgcgatct tggcgggctt ttaaaccgct ttcatcattc gggtggtaaa atgccaagca
     4801 tttgatgacg tgatcgcgtg ggaatgatgc tagctgagag cctaaatctc catactctaa
     4861 ttccagcggg cgggaagacg gctcttcaat cgggcgggca atccagtaat ctttgccggt
     4921 aatctcatta agtacatctt gcccgaaagt ggtatcggct aggatccctg cttgattttg
     4981 tggtaagccg gattgagttg cggtttgttc catcgctttt aatagcagct gtttcagttt
     5041 cggtatgcga gcaagatctg caccgacttt atttgccata tccaccaact gtttgcggtg
     5101 atcaaaagca aaaatacaga gattttccca ctgttttttg cgggtggtga cacggtgtaa
     5161 gtggtttaaa cgctcatcta aatccggacg tggtacactc tctgcacggg ttaaataatc
     5221 gtcaagttca cgtttggtcg gcattgccgg tgaacagccg tgacgagata ccactaacgc
     5281 tccgcacgca ttggcatagt ggcacgcttg ttcccaacct tcgttattta agtagccacg
     5341 cagtaagccc gacataaaag catcgcctgc acccagcaca ttcagcactt ctacacgcac
     5401 gccgtacaca ttcaagccac cgtctaaatc attcggcagc tcgccttcaa atactgaaca
     5461 ccctaatgcc ccacgtttgc acactaatac ggcattagag actttacgca catttttgag
     5521 tgcagtgaga gtatcggtcg aaccgcctgc gatatgaaat tcttcctctg tgccgacaat
     5581 cagatcgaaa tggtgcaata cttcttgtag cgatttggtg acttcggcac tgtctatata
     5641 acgggtttcg ccatcaccga gtgaggttaa tccccataac acagggcgat aatcaatatc
     5701 taacgctcgt tttacctcat ttctacccgc atattcgagt gcggtcagca cagcttcacg
     5761 ggttttaggg tttgacaggt gcgtgccggt aattgctaag caacggctgg aagcaatata
     5821 ggcttcgcta aaatcgtctt tggtgattgc catatccgca cagttatcac gatagaaaat
     5881 cagcggaaaa gtctctttat ctttaatgcc gagaataacc agtgcagtta agcgttcttt
     5941 atcggtaatt aaatggctgg tgtccacgcc tacgctttgt agctcttcac gtagaaaacg
     6001 ccccatatgt tcgtcaccga cccttgccag cattgaagaa cgtaaacctt gcaccgccgt
     6061 accgtaagcc acattgcctg acgagccgcc gaggtatttt gaaaatgtgg tcatctcttc
     6121 caaacgggaa ccgatttgtt gcccataaaa gtccaccgcc acacgcccta aacagataag
     6181 atccaatgga cgatcttgat gattaactgt tgccataacc gctccttaca acaagtaaat
     6241 ttgaatacac actatacatc atacaaaaat gaaattttta tttcaaattt attctattta
     6301 aattatcatt tctgtgatct agctctcact ttgaaaaata aggcaataac ttcgcagaaa
     6361 tgagaactgg atcacatctt tttttcgatt tccttgctat tataaatgaa ataaattttt
     6421 catttgtaaa aatcagtaga aaaccgaccg cttgcaaaag cgatgtaagc cagaggaggc
     6481 tttatgcaga ctactcgttt aacggttgca caggcgttag tgcaattttt ggataatcaa
     6541 tatttagacg tggacggcaa agagattaaa ttcgttcacg gtgttgccgc tattttcggc
     6601 cacggcaatg tgctgggaat aggtcaggcg cttgctcaaa atgccggtgg tttaacgctc
     6661 taccaaggca gaaatgagca aggtatggca catttggcga tgggctttgc taagcaaaat
     6721 ctgcgtcaaa gaattattgc ctgtacttcc tcggtcgggc cgggggcggc aaatatggtt
     6781 acggctgcgg caacggcaac agcgaaccgt attcctcttc ttttattacc gggcgatgtg
     6841 tttgcgaccc gccagccgga tccggtactg caacaaatcg aacaacctta cgatttaagc
     6901 attagcacta acgatgcgtt ccgtgccgtc agtaaatatt gggatagagt gcaacgccct
     6961 gagcagttaa tgagtgcttg tatcaatgcg tttcgtgtgc tgaccgaccc tgctgaaacc
     7021 ggtgctgtca ccattgctct gccgcaagat gtacaagcgg agagttttga tttcccgaac
     7081 agcttcctgc aaaaacgagt gcatcgctta gagcgtacac cgccgacaac agcgatgatt
     7141 aagcaagcgg taacattaat tcaaaccaag aaaaaaccgc tgattgtctg cggtggcggt
     7201 gttcgctact cgcaagcggg tcaaattctg caaaaatttg ctaaacagtt cggcattcca
     7261 tttgctgaaa cccaagcggg taaaagtgcg gtggtgtccg atcacgcatt gaatgtaggc
     7321 ggagtgggag aaaccggttg tttagcggca aaccgtctgg caaaagaagc ggatttagtg
     7381 attggcattg gtacacgcta caccgacttc acgacttctt ccaaatggat tttccaaaac
     7441 ccaaacgtgc agtttttgaa cattaatgtg gcacgttttg atgcgtacaa attagacggc
     7501 gtgcaactgg ttgccgatgc aaaaactgca ttagaggcgt taagccaagc cattcctact
     7561 gattatcaag ctcaatggga gaatgaaatt tcacaggcga aagcggattt tgctgatgaa
     7621 attcaacgcc tgcgcgctgt gcaatatcac cctgatttca cccctgaaat taacgataat
     7681 cttgatcata aagcggttca caatgaattt attcagctca ccggttccca gctcacccaa
     7741 acccaagtgc tgggtattgt gaatgaaacc attgataaca atgcgattat tgttgccgcc
     7801 gccggaagtt tgccgggtga tttacaacgc acttggttaa gtaaaggtga agagacttac
     7861 caccttgaat atggctactc ctgtatgggc tatgaagtga gtgcggcagt cggcgtgaaa
     7921 attgcccgcc ccgaacaaga ggtctatgcc ttgctggggg acggctctta cttaatggca
     7981 cacaccgaat tagtgacctc aattcaagag ggcaaaaaaa tcaacgtggt gctgttcgac
     8041 aatatggcaa acggctgtat caacaacctg caaatcggca acggtatgga cagtttcggt
     8101 acggaattcc gcttccgcaa tggcgaaact aaccaactca acggcggttt agtgccgatt
     8161 gattttgcca aaaacgccga agcatacggc tgcaaaacct atcgggtaac taacgaagcc
     8221 gaattgcgtg ccgcccttga tgatgcgaaa aaacagaccg tttctacctt aatcgatatt
     8281 aaagtgttgc cgaaaacaat ggctcacggc tatggctgct ggtggcacgt tggtgtcgcg
     8341 gaagtgtcag agagcgagcg tattcaacaa gcccgccaac gctccgaaga gcagttagct
     8401 aaggctcgga agtattagtt aaaaaaacaa ctccccactt tgagctacga ggggagaata
     8461 tcaagcggtc aaatttgcaa aatttttgat aaaaataacc gcttgcatcc aaatttatct
     8521 ctataaatca aacgaggttt ctctatgaaa gctgaaaaca ttcaattagg cattgcccca
     8581 atcggttgga cgaacgatga cctgccggaa ctgggagcgg aaaacacttt cgagcagtgt
     8641 gtgagtgaga tggcacttgc cggctacacg ggctgtgaag tgggtaataa atatccgcgt
     8701 gatgttgccg tgttaaaaca caaactggac gtgcgtggca ttcaaatctg taatgcgtgg
     8761 ttcagcacct tctttgtgga cggtaaacgg gaagagacca ttgccgagtt catcaaacat
     8821 cgtgatttct tgcatgcaat gggggcaaaa gtgatcggct gttccgaaca gagccgtagt
     8881 attcaaggca caaccaaatc tgtgttcaaa gaaaaaccga ttttcaacga tgaagattgg
     8941 aaacgtatgg cagaaggcta taacgaattg gcgaaacttg ccgccgaaaa aggaatgaaa
     9001 gtctgcctgc atcaccatat gggaaccggt attcaaacac ccgaagaggt cgatcgctat
     9061 atggcagaag tgaatgacga tgtctatctg ttgttcgatt cagggcattt gtactattcc
     9121 gaaggctgcc aaaaagcgat gctcggcgta ctggaaaaat atatcgaccg tattatccac
     9181 gttcacttaa aagatgtgcg tgatgaagtc atggcggaag taaaagcaaa agatttaagc
     9241 tttttagaag gcgtgaaaaa aggcaccttt actgtaccgg gcgatggtgt cattgatttc
     9301 cgtccgattt tcgatatttt agaaaaacac gactacaaag gctggatggt tgtagaagcc
     9361 gaacaagatc cggcacttgc caacccgttt gaatacgccc tcaaaggcag aaaatatatc
     9421 cgtgaaaccg caggagttta atatgttaaa agtaggtatt attggtgcag gccgtattgg
     9481 acgtgtgcat tctgaaagta ttagcaaata tgtcaaaggt gctgaaatca aagcaatctc
     9541 tgatgtaaaa attaccgaag aattgaccgc ttgggcaaaa tcgatgggta ttccggaagt
     9601 ttatgatgac tataaaaaaa tcctgcaaga tccggaaatt gatgctgtat tggtctgctc
     9661 ttccaccaac actcacgctc cgatttcgat tgaggcagca caggctggca aacacgtttt
     9721 ctgtgaaaaa ccggtagatg cagacccagc taaaatccgt gaagtattga gtgcagtcga
     9781 aaaagccggt gtaaaattcc aagtgggctt taaccgccgc ttcgaccaca acttcaaggc
     9841 gattaaagac cgtgtggcgg caggcgacat cggcgaaccg cacgttatcc gagtaacctc
     9901 tcgtgatccg gaagccccgc caatcgaata tgtgaaagtc tccggcggaa tgttctttga
     9961 tatgaccatt cacgacttcg atatgattcg ttatttatcc ggcagcgaag tggaagaagt
    10021 gtttgcagtc ggcaccgtat tagtaaaccc tgaaatcggc aaagcgggcg atattgatac
    10081 tgccgttatc acgttgaaac tgaaaaacgg agcaatcggc gtaatcgaca acagtcgcaa
    10141 agctgcctac ggctacgacc aacgtgcgga agtgttcggc tcgaaagggg caatccatat
    10201 cactaatgat accggctcaa ctgccgtatt ctcaggtgaa aacggcgtgg tggcggaaaa
    10261 accaaaatac ttcttcttag aacgttatat gcaatctttc gccgatgaaa tcagctgttt
    10321 cgtagattct gtggtaaacg acaaaccaac gttagtaaac ggcaatgacg gcttacaacc
    10381 ggtacttatt gccttagctg cgaaaaaatc actggaagaa aaccgaccag tgaaattgag
    10441 tgaagtggcg taattgatca taaatacaag cggtcggttt tactcgctac actcgcactt
    10501 cgtgccatcg gcatagccga tgttcaaacg caagcatttt gcagaaaaat ttgtaaaact
    10561 gaccgtttga gtttttattt attatctttt gggaaataaa tataatcgtg ctcaattttt
    10621 attgattgtt taaataaata gaaggctgga attatcaaaa gagttaatac aataccaata
    10681 aaatatttaa aattttctgt ttgcattcca atatattcaa aagtgaatct aatcccaaga
    10741 gggtaattcc cccattcttt tgccaaacag atatgaataa tcaaaaagaa gataatacct
    10801 aaaaaacgtc gagatattga tattctgact ctcatttttt cttcttcttt ttcacatagt
    10861 atctcaactc tgcattattt tccttagctg cttgtatttt taatattgaa agcatttcgt
    10921 atttgtgtat atcttcaatt ttaggcagct cataagtgtt acatcctatt ttatcaagaa
    10981 ggtctgataa aataaaaata tgtaataaac gcatcattgt aaataatgca gtaaatgtaa
    11041 ctgaaaaaaa gaaaattgct gcaatataat caatggtttt tgtgagatat atttcctttt
    11101 gctgtatcgc aatatagata ggcacttgat gaacaagttg gaagtaagca tccaaataaa
    11161 caactatcaa tatgaagcct aaaaaccatt ctgtttgcat aagaacattg atagggctgt
    11221 tttttgtgct aaaaatttct ttaattgaac tcataatttt tccttaaatg taaaaaaacg
    11281 tacctcaacc aatttgagat acgtttctat tttaatgtaa ttattaaatc tcactcacct
    11341 ccacccacct tttctcctcc gccgattttg ctatcgcttc caatactctg gagattttat
    11401 agccttcttc aaaatcggga tacatcgggt catcagcggc gatgccgttg atgaggtcac
    11461 ggatttccac cgctttttgg tcgttaaaac cgatgccgtg accggcactc acacaaaaag
    11521 cagcgtagtc gggatgttcc gggccgacta aaatggtttt gaatccttgg cgggatttat
    11581 cgtcatcgtg caaatagagt ttgagttctg ccattcgttc ttgggtatag ctgagcgtgc
    11641 ctttagtacc tgtaacgaca taggtcagcc ccattttacg cccgcaggaa atgcgggagc
    11701 tttcgagcgt gcccattacc ccattagcaa atcgtatgag actacttgcc tgatcttcgt
    11761 tttctacttt gattttttct gctggattgt gcggactagg gcgttcttca atcactgttt
    11821 gcatatcgcc gataacacgc tcaatgtctg aaccaaccaa atagtgtgcg atactgacaa
    11881 tatgtgcggc taaatctccc aacgtaccaa gcccggcttt ggctttgtag cagtgccaat
    11941 caatcggggt attagggttg gcgagataat cttcgttatg cgtgccgtag aaatgcacca
    12001 cctcaccaat ttcgccgttt tgaataattt ggcgagccag ttgggtggtt ggatttttga
    12061 tatagttgaa accgaccaag gttttaactc ccgcttgttg agcggcaatc accatttctt
    12121 tggcatcttg ggcggtgagt gcaagcggtt tttctgaata gacgtgtttg ccgtgtttaa
    12181 tcgcttctaa ggcaatttct ttgtgcagaa aatttggtgt acaaatgtcc accacatcga
    12241 cattcggatc ggtaaccaat tttcgccaat cgtcagtagc acgctgaaag ccaaattctc
    12301 gggctttttg atcggctaat gcttggttga tttcggcaag gtattccagt tggattttgc
    12361 ctttaagtgg aaacagggtt ggggcttgag cgtaggcaat ggcgtggcag cgaccgatat
    12421 agccggtgcc aactaagccg attttgatgg ttttcataat actatcccag tagggtgcgt
    12481 ttgctaacgc accattagaa ttttcagtgc attggcaaac gcaccctata agaaagcggt
    12541 ctggttttgc aaaattttta caaaatcaga ccgcttgtgt tagctatcta taatgctcct
    12601 cgtctgctct tcgcataggt gtcgaaggca acggcaagga tgatgattaa gcccataatg
    12661 atttgttggt agtaagcgga aacgtccatt agtactaaac cgttaatcaa tacacccata
    12721 ataatggagc cgatgatggt gcctgtgact cgtccgtatc cccccattag ggaagttccg
    12781 ccgataacca ctgaggcaat tacacgtagc tcaaaagaaa cgccggcaac ggattcggca
    12841 ctgcctaaac gggcggagag aatgaaaccg gcaagtcctg ccaatgctcc gatcaccaca
    12901 taaacactga ctaaggtacg gttaatattc acaccggcta aacgggctgc ttccggattg
    12961 ccacctaccg agtacacata gcgtccccag cgggttttat gcaatgcgaa gtaaccgata
    13021 atggcgacta cggcaaaaat cactaccggc accggtacgc ctaaaatatc gccacgtccc
    13081 caccagcggt aaccttcgtc aaatccggca attggcgagc cgttatttaa cacaagtgtt
    13141 aaaccacgcc aaattgtcat accgccaagc gtgataataa acggtggcag tttgagttta
    13201 gtgacgccta agccgtgtaa ccaaccaatg aaagtgccta aacctaaaca gatactcaaa
    13261 cctatcagcc agctcattcc gccccaagca ccggcttcta gcgttaccgt attatcgcct
    13321 ttgataatat aggccgcgaa cattgcggta acagcaagga ttgagccgac agagagatcg
    13381 atccctgcag ttaagatgac gaaagtcatt cctaccgcca taatgccgaa aatcgacact
    13441 tcggttaaaa cgttatagat gttgcgttgc gataaaaatg ccccgttttg tgaagtgaag
    13501 aaaataatca gtaagatcaa gaaaatcagt acgccgaaac gttcaaagaa ggcgataaaa
    13561 tcgatttttc ctttgtcatc gaccataccc atatttttta gaaattgcgt tgtcatacaa
    13621 acctctctta tgctgccgct ttacgctgaa cgccaacagc catcattgac attaattttt
    13681 cttcggtggc atcatcgccg tgaatttcgc cagttacccg accttcggaa agagtgataa
    13741 tgcggtcgga aatcgccata atttccggta aatcggagga aatcactaat accgcaacac
    13801 cttgttttgc catatcaaac agcacttggt gaacctcaga ttttgcccca acatcaatac
    13861 ctcgtgtcgg ctcatcaaca attagtactt tcgggttgag tgccatacaa cgggctaaaa
    13921 tcactttttg ctgattacca cccgataatt tgcgggcttc aagttcgcta cttgccattt
    13981 tgatgcgtaa cgcttggcgg taggtttcga ttaaatcatc ttctttttga ttatcgacaa
    14041 acaagttacc cttcaataat ttgcttaaaa tcggcagggt catattggtt ttaatcggta
    14101 aaccgagaac taagccctct tttttgcgat cttccggcac aagggcaacc cctttttcca
    14161 aagcatctaa cggcgaggtg gcagcataag gcttaccgtc taggctgatt tcatcagccg
    14221 tataattttc taccccaaac aagcaacggg caatttcagt tcgccctgcg ccaactaagc
    14281 cggcgatccc taatacttca ccctcgtgaa tgttaaaaga gacaccgtgg agagcaatgc
    14341 cgtgtggatc gaatgccggt ttttcccgat gcagattttt cacagctaaa cgtattggtc
    14401 ggtgggtatg gtgagtctct tctggtggac ggcgagtaaa ggcaacttca cgtcctacca
    14461 tcattttaat aatttgatcg acattcacat ttttgacttc accctcacca gaatagcgcc
    14521 cgtcttggaa aacggtgaaa cggtcgcata gggcaaacac ttcgtttaag cggtgggtca
    14581 cataaatcac gctaatgcca cggcttttta aatcacgcac gatttggtgt agtgtttcca
    14641 cttctttatc acttaaggca gcggacggtt cgtccataat aatcaactta gcgtttaagg
    14701 tcattgcacg ggcaatctcg accatctgct gttgtgccac acttaaacgg gaaacttggg
    14761 tgtcaggttt gatatttaag ccgagattat ccagcactaa ttgtgcttcc tcattcaccg
    14821 ctttttcatt gacgaataaa cctttcaccg gctctctgcc caaaaagaaa ttttcagcaa
    14881 ccgtcatatt cggtaacaag ttaaattctt gataaatcgt tacgatgcct ttgagttggc
    14941 gatcaaacgg ggaatcgctc aaacttaagg tttcaccgtt aaagataatt tcgccacttg
    15001 tttgtggctg agcgcctgaa agtgctttta ataaggtcga ttttcctgca ccgttttcac
    15061 ccaacaatgc gtgaacttcg ccttttccca cagtcagttt cacgccattg agtgccataa
    15121 caccagagaa actttttgtc agatctttca cttcaagtaa gggagtagac atacaacctc
    15181 cgtaaaaaaa cgccctccgg cctcagccgg aaggcagata aattattcgc tgatttctgc
    15241 aaaacgttct gcttcttgca gattatcttt caggataatt tttggcggat agtccgcacc
    15301 gctcacttct ttgctctcac ggatattgcc aaccacttgc tctaatgcgg tgcttaccgc
    15361 aaaacttggg cgttggtcag cggtgagata caaccagcca tctttcacac gtgcaagagc
    15421 ctcaggggtt gagtcaaagc cggttactaa aatatcgccg gctttcaaac cttggctacg
    15481 caatgcttca atcgcaccaa gtgccatatc gtcattcgct gaaataatca cttctggttt
    15541 ctcttttaag gttggtaaca cactttcaat aatgcgtaat ccctcagaac ggagccagtt
    15601 accggtttga tcaaccacga ttttatattt gtcaccaccg gcagctaatt catcacgaat
    15661 acctttggta cgttcaatgt tagaggttga acccggctgg ccggttaaaa gaataatttt
    15721 tgccccattc gggtatttgg ctttcactgc ttttgcgact tcttgaccgc ctgtgtagtt
    15781 atttgcccca aagtgtggaa ccggcttact gctttcaact tttcggtcta atgtcgcagc
    15841 aggaattttt tctttgataa tttcttccac tgcacctgaa atcgcattca catcattcgg
    15901 ggaaatgata atgcctttag caccacgggt aattgcattt tctaagtcag aagcctgctt
    15961 agtagaagaa ctttgcccgt ctaatacttg caatttgatc tccaactttt tactggtttc
    16021 taccgctact ttttgtagtt gaacttcaaa cgggctggat aggttcggta agctaaatac
    16081 cacaagctca tctttcgcaa agctgttcat tgctaagcct aacgttaaag cactcaatac
    16141 aaatttaata cgctttttca ttacaaaatc ctctttttaa gatgggaatt gacggcgaat
    16201 attgccaatg ttacttcaaa ctgcgaagga aacttaagtc ttatttcaat aataaacctc
    16261 aatgaaataa atttttcaat ttagaatata tcattcaaaa ttttccaaac caaatgcttt
    16321 gtttcaaatt tgttacgtag atcacatttt taggaagaga taaatgcaag cggtcaaaac
    16381 aggtcgcttt tttgcaaaaa tttgaataaa aatgaccgct tgtgagatga aaaccaataa
    16441 aaaagcggtg atttctcacc gctaaacact caaaaaagaa atgtactcgt tattataagg
    16501 ttgggaaatt aaatgccgct tggctacgca ccgagctgtc cggccaacgg gttgtgatgg
    16561 ttttcatacg ggtgtagaaa cgcacgccgt ctgtgccgta cacattgaga ggcccgaaaa
    16621 tagaggcttt ccaaccgcca aagcagtgga acgccattgg cacaggaatt ggaatattca
    16681 cgcccaccat accggcttgt acatcttggg tgaattgacg tgctgaatcg ccatctgcgg
    16741 tgaaaattgc actaccattg ccgtattggt gactgttaat gagtgcgatc ccttcggcat
    16801 aatctttcac acgcacaaca gagagaaccg gtccgaagat ttcatcttgc cagatggtca
    16861 tttcaggtgt cacgttatca aacagcgtac ctccgacaaa gtaaccgttt tcaaaccctt
    16921 cgactttata gcctcgacca tcgacacaga gtttcgcccc ctgtgccacc ccttgatcga
    16981 tatagctctc aattttggct ttatgctctt tggaaatcac cggccccata tcattttcaa
    17041 gcacgccttg tggtagtaag cctgaaccga ttttcaatgc tttgacctta ggaattagct
    17101 cttcaatgat tttatcggct aattcatcac caacaactac cgctaccgat agtgccatac
    17161 aacgttcacc ggctgcacca aatgctgcgc ccagtaaggc attaattgtg ccttgtacat
    17221 cagcatccgg cataatcaaa gcgtggtttt tcgcaccgcc caaggcttga acccgtttgc
    17281 cgtttgctga gcctttctca taaatatatt gtgcaattgc agttgagccg acaaaactca
    17341 ccgcctgaat gcgagagtcg gttaaaagaa tatctaccgc ttctttatca ccttgcacca
    17401 cattgaatac accgtccggc aagccggctt cttttaataa ttctgccaag cgaatagaca
    17461 cacttgggtc tttttcagac ggttttaaaa cgaaagtgtt accgcaagca agtgccactg
    17521 ggaacatcca catcggtacc attgccggga aattgaacgg ggtaatgcct gccactacgc
    17581 ccaacggttg ctggattgag tgaatatcaa tgccacgccc tgcattggcg gagaactcac
    17641 ctttttgtaa gtgtggaata ccagtggcaa attccaccac ttctaaacca cgggttaatt
    17701 cgccaatcgc atcggaatag attttgccgt gttctgagct gattaaacga gccaactcat
    17761 caaagtttgc ttccaataac tctttgaatt taaataaaat tctggcacgg cgtagtggtg
    17821 attgttgtga ccagcttttg aaagcctgat cggccgctgc aattgccgca tcgacttcgt
    17881 ttggcaggct taatttgact tttttggtct cttcaccggt tgcgggatta aataccgagg
    17941 taacacgctg gctttggctt tcaacgactg caccgttaat aaaattttgg acaaattggc
    18001 tcattggagg ctccttatca actgattgag aggaaaaacg gataaaatac agccgataaa
    18061 ctaccgctaa aaatggaaaa tatcaataca taatactaaa aaatgaaaat tttatttcat
    18121 ttttgtgatc taagtagcaa gtttacagat tgccggtatt aaaatgagac aaaatttcgt
    18181 atagtttgaa agcgtattcc atttcgttaa gcgaggtttc ctatgtctag tccattattg
    18241 tctaaaccca atttcaacca acatgaaggg ttaattcagc acattacccc tgaaaatgca
    18301 cagtgggaat atgttggatt tgatgtttat cagctcagta agcaacaaat tacgctggaa
    18361 agtggtgaaa atgaactttg tctagtcttt gtgaccggtt ttggctctgt ctatgttgat
    18421 gattatgctt ttgaaaatat cggcaaccgt accacgccat ttgaaaaaat tccgccttat
    18481 gcggtctata tcccgccaca caaaagcgtg ttggttaaaa ccgaactcaa tttagaattg
    18541 gcagtgtgca aagcaccaag tcagggtaat tatccggtgc gtttgattag cccgaaccat
    18601 atcggtgtgg aaaaacgggg ctttggcaac aatcaacgct tggtgcataa tattctgccg
    18661 gaaaccgaag cagccgacag tttgctggtg gtggaagtct ttaccgatga aggcaatacc
    18721 agttcctacc caagccacaa gcacgatgac aaacactcta ccgaagaaac ctatttggaa
    18781 gagacctact accaccgctt cgatccacca caaggttttg caatgcaacg ggtttatacc
    18841 gatgatcgca cacttgatga atgtatggcg gtgtatgata aaaatgtggt taaagtgcct
    18901 cgtggctacc accctgttgc taccattgcc ggctataaca actactacct aaatgttatg
    18961 gcagggccgg tacgcaaatg gaaatttact tgggaacaag atcatctttg ggtgaacagt
    19021 gaaacctata aagccaaatt tgagtaatgc aagcggtctt tttccaccaa ttttttacaa
    19081 aataagggat taaaaatggg acgcttttgg cgtcccattc ggttatactt tcatacaaag
    19141 atattttatt tctaaaaact cttcaatacc gtacttcgaa ccttcccgcc caagtccaga
    19201 ctctttccag ccgccgaacg gagcgatttc gttactgatg atcccctcat taatcccgac
    19261 aatgccatat tccaactgct ccgatactcg ccaaattcgc ccgatatttt ggctgaataa
    19321 gtaagccgcc aaaccaaact cagtatcatt cgcccactgg ataacctctt cttcggtttc
    19381 aaatttgaaa atcggggcaa ggggagcaaa ggtttcctca cgagccactt tcatcgcttg
    19441 agtgacattt ttcagaatgg ttggctggaa gaatgtgcca cccagtgcgt ggcgttcacc
    19501 gcctaacacc agttctgccc caagtgaaag ggcatcgtta atgtggcttt cgactttttc
    19561 caccgctcgt tcactaatta gtgcacctat cgtgacctct tcctcaaatg gcgagccaag
    19621 cttgatttga gccactttct cactcaattt tgcaagaaat tgctcataaa tgcccgcttg
    19681 cacataaatt cggttagcac agacgcaggt ttgcccaccg ttacggaatt tagaggcaaa
    19741 cacgccctca accgctgtat ctagatccgc atcatcaaac acaatcgccg gtgcattacc
    19801 gcctagctcc aatgccaatt tttttaccgt ccctgccgat tgttgcatta aaattttgcc
    19861 gacacgggtg gagccggtaa aggtgagttt gcgtacggtc ggattagtgc tcaactcccg
    19921 ccctacacct tcgacatcgc tactggtaat aatgttaaat acccctttgg gaatacctgc
    19981 ttgatccgct aattgggcta atgctaaggc agaaagcggg gtttctgccg ccggtttaat
    20041 cacaatcgca caacctgccg ctaacgccgg tgccgcttta cgggtaatca ttgcatttgg
    20101 gaaattccac ggtgtaattg ctgccaccac gccaatgggt tgtttagtca caaacaagcg
    20161 gcgaccggct ttatcttgtg gcaagacatc gccataaatc cgcttgcttt cttcggcaaa
    20221 ccactcgata aaactggctc cataggcaat ctcgcctcga ctttctgcca atggtttacc
    20281 ctgttctaga cttaaaatct gggcgagttc ttcttggttt tgcataatca gctcaaacca
    20341 tttacgcaaa atcacggaac gctctttggg caataatgcc tgccattttt tctgggcaac
    20401 tgcggctgct tcaatcgctt gagcggtttc ttccgtgcct aaatcagcca cctcaccgat
    20461 tttctcacca ttagtcggat tctgtaccgt aaaggttttc ccattttggc ttgaaacaaa
    20521 tttaccgtta atataggctt ggaaacggag tagcaaaaat ttgtgatttg gcataatcac
    20581 tccttgaatg gttaaaaaga gaacaatatt gactatgatc caatttcagt aaagagaaaa
    20641 gagctgaaaa ataacttttt actcaataat aaagcacctt agacaagcgt tcttctaagg
    20701 tgcagccatt tattattgag aattaactta aattctctac atatttaata attaagatac
    20761 aatcattgga gcccatacga atccaaaagc aagcccaaca gcaaccccaa ctaaagctgg
    20821 aagcataaac ggatgatcta taatatattt gccagcacga gttgaacccg tagtatctaa
    20881 ttccatcgct gctaatgaag ttgggtaggt tggcaggata aaaatgcctg taattgcaat
    20941 gaaagaagcc aaaattgccc agttagggat ccccaagctt actgctaatg gaataataag
    21001 agcagaagtt gacccttgtg aataaagtaa tgcacaagta aaaaagagta ctacagctaa
    21061 caacattgga tattcagtta aaatatttcc aatagaggct ttaatttcta ttaaatgtgc
    21121 atcgacaaaa gtcataccta atgtaacaat cccgataatt accgcaatag aagtcattcc
    21181 tgagcggaaa attggactag ccacaatcgt atcaggttta atttttccta ccaacatcat
    21241 taagcacgaa gaggctaaca tcatcacaat aattatatct cgggtactca ttgacttccc
    21301 attttcatat actggcttta accctggaac ggctgcaagt agaacaacca atacagttgc
    21361 tagtaagaaa atgccaatcg atagttttgc tccttttgaa taggtagatt cactcgctaa
    21421 cttacgagat gggctgacga ttcctgcttt taaacgttct aaataaacaa catcattttg
    21481 caattcacag ccctgcttag aagcaacaaa tgcagcaacc atagaggcaa taaaagaaac
    21541 aggtaagcat actgctatta cttgaaaaaa tgtaacactg ttgttttcca ttactgctat
    21601 catagccgcc attgcagcac tcaatggaga acctgcaata gctaattgag aagacacaac
    21661 cgagccggct aatgctcttg aagggcgaat accactctct tttgccactt ctgcaatcac
    21721 aggtaaggtg gaaaagacga taaaacctgt accagccata atcgtcatta accaagtaat
    21781 catcggtgca ataaagttaa tatatttagg atttttacgc atcaatactt ccgcataacg
    21841 aacaagtaaa tccatacctc ctactgcttg taacacagca gcacctatta caacagtcat
    21901 aataatcagc attacatcaa ctggaataga acccataggt aaaccaaaac ctagagttag
    21961 aatcgcaagc cctaaaccac catatagtcc tattcctaag cccccagaac gcagtcctaa
    22021 atagattgca gcaagtacca caaagatttc tgcataaatc atatccatct ccttaaatta
    22081 atgagtttga taccaatcaa ttgctttttt aaccaatacc aacgttgaat ctacataacg
    22141 cattggctca cgctctattt cttgagctaa aataataggt acttctgtac aacctaaaat
    22201 aattacttct gcacctaaac gaatgagttc atcacgttgt tgtaacatta gctctgtggc
    22261 tttctctaac tcacctgatt ttaataaata gatactatcc attactgcct tttgaccatt
    22321 ttctgtcggg caaataaaag tcagtccttg tgcttcaagc tgttttttgt ataggtctac
    22381 cgccaaagtt gcatcagttg ccaacaatcc aacccgccat tttccacact tcaaaacctc
    22441 atcaaccaca caatcaatca tacttagcat ctctacctga cttttggcct tcaagtgttc
    22501 aaaccaataa tgtgcagtat tacatgcaat aatgatgcag gttgcccctg cactctcaag
    22561 cccttcaata tatttttcca ttaccggagc cggattctct ccatttgcta aaatatagcg
    22621 agttctatct ggtatgtcgg gaatagagga aatcaataat ggaatatgag cttgatcaca
    22681 atcagctggt gttaagcgga taaatttttg gaacatatct gctgttgctg caggtcccat
    22741 tccacctaaa atgccaataa tatttcttgc catacacttc tccttataag atttaattta
    22801 ctgcgatgac ttatacaaac aagttatgca aaaaagaaat gcaataaatc gaatcagtat
    22861 gcaaaaaatg caacaaagct ctttatagat agaaaaaaaa tctttaaaat caataaaata
    22921 ctaatatatc aaatataaat ttaatgcatt taatgaaatc ataatgcgaa atttgcattg
    22981 gttaggatat gaaaaacata gaaacaaaat ggttagaaga tttcttaacg ctagaagaat
    23041 gtcgccattt ttctcaggca gcagaaaaaa gaaatttgtc acaatctgca tttagcagac
    23101 gtattttagc tttagaagaa gttgtgggag tgaagttatt tgatcgtacc tctattccat
    23161 tacaactcac agaacaaggt aagctatttc attcacaaac gcgaaactta ttacaacaat
    23221 tacagaataa tctagatgaa ttattaggac ataattgtaa cttacctaat attaaatttg
    23281 cggcggctca ttccctctct ctttctatta tgcccaaatt aattaagaaa ttatcacaaa
    23341 caaatgaaaa ttttatttat tccgttgaa
//
LOCUS       DANLZQ010000022        22936 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.022, whole genome shotgun sequence.
ACCESSION   DANLZQ010000022 DANLZQ010000000
VERSION     DANLZQ010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 22936)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22936)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22936
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.022"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(<1..248)
                     /locus_tag="PXE50_000868"
     CDS             complement(<1..248)
                     /locus_tag="PXE50_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621799.1"
                     /translation="MKNVHTKYDHKAVKHGFAIAIQNSVNYLYEIAERQPPCNFELCW
                     KNCAAHYLAIKSAESNNERDLNLFLDYINEPKDSTFTVA"
     gene            complement(542..2731)
                     /gene="yccS"
                     /locus_tag="PXE50_000869"
     CDS             complement(542..2731)
                     /gene="yccS"
                     /locus_tag="PXE50_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01666 family membrane protein"
                     /protein_id="HDL5621800.1"
                     /translation="MNKFLRYLQHSWLSENVIKTLPMFISLNIAAVSIWQLGISDFAM
                     PLMLGIIAGGLVDLDNSLIGRAKNLIISLVAFSLSSIGASVSLHLGWLFVPVAVVCTF
                     LLVMLGAIGQRYSTIAFGTLIVAVYNSLAYTPEVLWYHNVVMILLGTLLYGLVGILVY
                     LIFPNRTVQENLASAYLALSHYLLAKSAYFDPDDDDLAAKQLALAKANSEVMAAFDKT
                     RVALFYRLSRQHKQQRTQRMLRYYFTAQDILERASSSHYQYHELFQQLSNSDLMFRFQ
                     RVLELQAAACQKIAMSLRHREVYEHGVRGEKALQGLLNSLNYHQERGLKSAYRWRAIA
                     ENLGNIERQLAQIEQGSSSGEHIEPLSKNFTKSHRLIAENITGLSNISQAIKAHLTFE
                     SQLFRHAVRLSIVVLLCSAIVPILGFDSKGYWILLTAIFVCQPNYTATKTRLIQRVIG
                     TIFGVLVGGSFELFNVALSLEAQLGLIVLTGSLYTFFRLVHYGFSTFYITVLVMISLD
                     IAGVSLESGILMRMLDTLLGTAIAWLAVAFLWPDWKYLNLQRNLHNGLKASGQYLRHI
                     IAQLQFGYNEQLPYRIARRDVHNHLSALSNAITNMYSEPQKYANDLTFAPKLLGIAYT
                     LLGYISTLGAYRIASREINQQVDFSAMFFSHAREVANIIGQIASESRSFAKLSEKLTA
                     IDQDLTQFEQENQQKQNDLALVLIQQLRLIVQLLPQLNSILQLKSVR"
     gene            complement(2775..3233)
                     /locus_tag="PXE50_000870"
     CDS             complement(2775..3233)
                     /locus_tag="PXE50_000870"
                     /EC_number="4.2.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylglyoxal synthase"
                     /protein_id="HDL5621801.1"
                     /translation="MKTTVRTIAKQKQIALVAHDSCKQDLIRWTQTHQAQLASHKLYA
                     TGTTGHLLARETGLEITSLLSGPMGGDQQLGGLIAEKKIDLLVFFWDPMNAAPHDPDV
                     KALMRIATVWNIPVAINETTANFLLNADLFNQAISVNVPDYDGYLAERLG"
     gene            3359..4633
                     /gene="thrC"
                     /locus_tag="PXE50_000871"
     CDS             3359..4633
                     /gene="thrC"
                     /locus_tag="PXE50_000871"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HDL5621802.1"
                     /translation="MNLYNIKHPEEQVNFAQAVRQGLGKNQGLFFPEVLPKLDSIDEL
                     LDLPLVKRSQKILSALIGEELPQETLNAMVKNAFTFPAPLAKVNDDIYALELFHGPTL
                     AFKDFGGRFMAQALANVRGDGKITILTATSGDTGAAVAHAFYGLENINVVILYPKGKI
                     SPLQEKLFCTLGGNIRTVAIESDFDACQALVKQAFDDAELRQAIGLNSANSINISRLL
                     AQICYYFEAVAQLPKEKRDNVVVSVPSGNFGNLTAGLIAKTLGLPIKRFIASTNANDT
                     VPRYLQSGKWEPNATVATLSNAMDVSRPNNWPRVEELFKRNGWSLSELGSAALNDAET
                     EAALKAQYAEGYLCEPHGAIAYQSLKDQLQQGETGIFLCTAHPAKFKESVEHILAIEL
                     PLPEALDKHNKLPLLSDEMAADFATLRAYLLK"
     gene            complement(4712..5446)
                     /locus_tag="PXE50_000872"
     CDS             complement(4712..5446)
                     /locus_tag="PXE50_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HDL5621803.1"
                     /translation="MSFKDMTGQKVPSVTFRTRQNDAWVDVTTDELFNNKTVVVFSLP
                     GAFTPTCSSTHLPRYNELACEFKALGVDDIICMSVNDTFVMNAWKADQESENITVIPD
                     GNGEFTEGMGLLVDKNDLGFGKRSWRYSMLVKNGIVEKMFIEPQEPGDPFKVSDADTM
                     IKYLSPNWTAKESVSIITKPGCLFCAKAKALLKEQGYTFEEIVLGRDASTISVRAITG
                     KTSVPQVFIGGKYIGGSDELAAYFAK"
     gene            5561..6445
                     /gene="oxyR"
                     /locus_tag="PXE50_000873"
     CDS             5561..6445
                     /gene="oxyR"
                     /locus_tag="PXE50_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator OxyR"
                     /protein_id="HDL5621804.1"
                     /translation="MNIRDLEYLIALAEHKHFRRAAESCNVSQPTLSGQIRKLEGELG
                     TILLERTSRKVLFTQAGLTLVEQAKVVLREVKILKEMASNQGKEMSGPLHVGVIPTLG
                     PYISPIIVPALKAEFADLELYIYELQTNQLLDQLESGQLDCGIISFVKESESFIEVPI
                     FNEEMYLVVPEQHEWAALKKFDMNLLKNRELLFLDSGHCLRTNTLDYCLSIGAKENPH
                     FKATNLETLRNMVAANVGLALIPKLAAKPIKGVHYIPLENPKPFRAVGMVYRPGSPLR
                     ARYERLAQAITKIMQSEA"
     gene            6448..7080
                     /gene="fabR"
                     /locus_tag="PXE50_000874"
     CDS             6448..7080
                     /gene="fabR"
                     /locus_tag="PXE50_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor FabR"
                     /protein_id="HDL5621805.1"
                     /translation="MANGMSVRAIQKEKTRRALVEAAFNQLSSEKNFSNLSLREVARE
                     AGVAPTSFYRHFKDMDELGLAMVDESGLLLRQLMRQARKRIANGGSVVVVSVETFFEL
                     IADRPNVFQLLLRESSGTSQAFRTAASREIQHFVAELADYIMSKDNHSNRELAYIQSE
                     GLVTLVFTAGSHALDMNNQEREKLKQRVIMQLRMLIRGSTYYANKQASST"
     gene            complement(7107..7406)
                     /locus_tag="PXE50_000875"
     CDS             complement(7107..7406)
                     /locus_tag="PXE50_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4298 domain-containing protein"
                     /protein_id="HDL5621806.1"
                     /translation="MKKADIQKMQDCYNQWVELLPELEKGIEQWKRASALLEPLSRFY
                     ASPEWRELHDSFDEQLDTKGNYSILSEDALWNALSEHHQLALEWLKLSTAYITKE"
     gene            complement(7495..11310)
                     /locus_tag="PXE50_000876"
     CDS             complement(7495..11310)
                     /locus_tag="PXE50_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA-like family protein"
                     /protein_id="HDL5621807.1"
                     /translation="MKGSGLATVGAPETGDNGQTIYTVDVAKAGAPTVTRGNVADAIN
                     NSEKTSSVVAGSKAVTVKAGKEDDKGNTEYTVDVATDKSIGRDNDGNMTVNTDNVTIV
                     KDPTTGEVKANTTTLNNSPEGKVTEPTGDDAKKLVTAGDIANAINNSGFNVTAGDGVD
                     GGETKGKKTQLIKPSETVTFDAGKNMTLTQADGKFTYTTKDNVAFNSIDMSNGKPDTT
                     GSITNLKSGVGGTFADKAAPTDAERKAIADNINNATGDTLNNAVNVGDVQAAMKAATT
                     KVEGDKGVTVTSKTNDDGSTTYTVEAKTDGTTIKVNDKGEITANTSELTNNPDGKVEE
                     PTEPNALVTAKTVADAINNAGFNIKANGDEKSLVKTGDTVQFLNGKNIEITRDGNNIT
                     VSTAKNVNFDSVQFGNEGPKITNNGGNINVGDKDGNAVKVTNVAAGDVNADSKDAVNG
                     SQLYTFAMASREEVKSTDKSVTVNTTKNADGANVFDLSVNTDDVTIVKDPTTGAIKAN
                     TTALNDANNDGRIDEPTADDAKKLVTAGDITNAINNSGFTLKTSAVEGGEKLSGGDEL
                     INPGKAVEMVAGKNLTVKQEADGKVIYATKDDVKFSSVTSNTVTVPTDEADPANNPIT
                     INKDGINAGNKAISNVASNLIPVTADDKVQPADNNPTNLADKLSNAATLGDVLNAGWN
                     LQGNGKAVDTVVHNDTVDFINGKGTTVTVENKDGKNTIKVDSPIEFVNQDPTDSSTPS
                     NTAKFTGEAPVQLGNVASSVRNEDGSTPEGKDRAEAIKNAEGDKLNNVVNLGDLQAAT
                     NAATTKVGGNRGVTITPSTNADGSTTYNVEAKTDGTTIKVDNEGNITANTSELGNNED
                     GTVKAPTQPNALLIAQTVADAVNNAGFNIKSAGNKAAGDQAATKLVKTGEEVVFEAGD
                     NLTVKRDGNQFTFATAKDVSFNSVQFSENGPKITNDGDNIKVGDKDGKPTKITNVADG
                     DISPVSTDVINGKQLNNYAKVNGNNIGTDEDGSINIVNGNGTTITSDKAGEVKVNVNI
                     TDLTVADNGKINVQDPNGTGSRFVNATTVANAVNNVSWNVDSKAVGTGAVEGDKAPAK
                     VKAGSTVSVNAGNNIKVTRKGSDVTVAVSDTPEFTSKTGDTLVNNNGVTINNGSAGKA
                     VSLTKDGLNNGGNRITNVKAGEADTDAVNVGQLKGAVNHLNNKIHRNNREARAGIAGS
                     NAAAALPQVYIPGKSMVAAAGGTFKGENALAVGYSRSSDNGKLILKLQGNANSRGDFG
                     GGVGVGYQW"
     gene            complement(11273..11758)
                     /locus_tag="PXE50_000877"
     CDS             complement(11273..11758)
                     /locus_tag="PXE50_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621808.1"
                     /translation="MDTGSITVDNTTGAVTTPAEEDKVATTKTVSEAIQKAGWNAKSG
                     GNKADGDQEAAELINPGEKVIFAAGDNLKVKRVGTIFTYETAKDVKFDSVTFGDNGPK
                     ITNKDGNVNIAGNDGNPTKITGVKAGEADTDAVNVSQLKQAAASQNRSERFRFSNCWC
                     T"
     gene            complement(11767..13926)
                     /locus_tag="PXE50_000878"
     CDS             complement(11767..13926)
                     /locus_tag="PXE50_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HDL5621809.1"
                     /translation="MGARATSANAIALGTDTAATGNRATAFGAGALATGNRSTVMGWR
                     SAASGTRSFAMGSGAMGDKSVANATYSLALGSSANANATSTATRGTAIGYNATVSGVN
                     ATALGVSAVSSNQSTVAIGDSAKASAGFAIALGSGANVALNNSVALGSNSTVSNAVAV
                     PSATVNGITYSGFAANTTAAGNVVSVGSNTIKRQIQNVAAGQISATSTDAINSSQLYM
                     AMNATGNLANSTKNILGGNATVKPDGSVTYTNIGGTNKNTIEEALKAVKTEVVAGSNV
                     NITNATGANGQTIYTVNAYNTTANSSSPDYITVTGKAATAANTTNYEIGLTKKAIDDF
                     TKDTQATVVSNDGTVTVKSTERNANGTVIYDLSVNIPAQASQIQYFSVNSTVPENQAN
                     DGAKSRNSIAIGPNATATGGEQAAVALGTNSNANGNGALSLGVATVSKGIQATAVGHS
                     ANATANGTTALGRQTNATAGDATAVGSNANATAEKASAFGVAANASANASLAVGANSI
                     ASAQSAVAVGTRANATAQFATALGMGAQATLNSSVALGSESVVRAATPTENATVGGIT
                     YNGFAGVNKDTNYVVSVGSAGKERQIQNVAAGQISATSTDAINGSQLYMAMNATSNLA
                     NSTANNFGGGSVVNPDGSVTQPKYNVTNAAGTQYGNTATNVGDAITNLNNYVNQGFNI
                     KDNAGETKGTVTPNESVQFVNGKGTVSNVTQEADGVK"
     gene            complement(14155..14355)
                     /locus_tag="PXE50_000879"
     CDS             complement(14155..14355)
                     /locus_tag="PXE50_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ESPR domain-containing protein"
                     /protein_id="HDL5621810.1"
                     /translation="MNQIFKVIWNQATQSWVAVSELQRAKGKTKSVSSASKATLALLA
                     GASAVLGANDAVAVVSYRFNNK"
     gene            14719..15873
                     /locus_tag="PXE50_000880"
     CDS             14719..15873
                     /locus_tag="PXE50_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDL5621811.1"
                     /translation="MNQFFPLIFSLTLFSGVTLALEKAPRTMPTEGINKPLLGQILFF
                     DNMLSHNGSQNCSSCHNPDYAFIDNRTTPAKGVVSQGDTPTKFGKRNSPTMLYAKYSP
                     EFHFDEQSQEYIGGQFWDGRAKNLAEQAGMPPIDPNEMGMPNKLEVAKRLYNVPMYQR
                     FLGQFYGEKVWESYESVYAAMEDAIATFQQENKLLAPFDSKYDLFLKGEVQLTALEEK
                     GRALFFNKAQTNCSSCHQLQSAANHQEETFSNYHYYNVGVPGNPDLIAVNGFAPDFVD
                     LGLFENPNVKGDETQKGKFKTPTLRNVAVTALYMHNGVFKELKTVLLFLDSYNNPERK
                     INPETGTAWQQAEFEPTIAHQKLKAKPLSDEEIDALEAFLKTLTDERYRK"
     gene            complement(15921..16910)
                     /locus_tag="PXE50_000881"
     CDS             complement(15921..16910)
                     /locus_tag="PXE50_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence RhuM family protein"
                     /protein_id="HDL5621812.1"
                     /translation="MNDLIIYNTEDGKSNVALLVVENEAWLTQNQLAELFDTSVQNIS
                     EHIKNILKDKELDENSVIKDYLITAQDGKNYQVKHYSLEMILAIGFRVRSPRAVQFRK
                     WANSTLRTYLEKGFLIDSERLKNPQGRLDYFDELLEQIREIRASELRFYQKVRELFKL
                     SSDYDKTDKNTQMFFAETQNKLIYAITKHTAAELICQRADATKMNMGLTSWKGKVVRK
                     GDIVIAKNYLDNNELDSLNRLVMIFLESAELRVKNNQDLTLGFWRRNVDMLIEFNGFS
                     VLGNGGTITHKQMESFVREQYEKFDIQRKCLKQKEADWEDLQALEKLESELTR"
     gene            complement(17070..18434)
                     /gene="mpl"
                     /locus_tag="PXE50_000882"
     CDS             complement(17070..18434)
                     /gene="mpl"
                     /locus_tag="PXE50_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HDL5621813.1"
                     /translation="MKKHIHILGICGTFMGGVAMIARELGYKVTGSDTNVYPPMSTFL
                     AAHGIEIIPNYDVAQLQPAPDLVVIGNAMSRGNPCVEYVLDNQLNYTSGPQWLHDHLL
                     KDKWVLAVSGTHGKTTTTGMLAWILDQNGIDTGFLIGGVAGNFGISARAGNSPFFVIE
                     ADEYDSAFFDKRSKFVHYTPKTLIINNMEFDHADIFDDLKAIQRQFHHLVRTMPQSGC
                     ILSAIADQNVQDTLKMGSYSQLQFIGEQNEWFAKPLNADCSQFEVFHLGVKQGEVHWS
                     IIGKHNMHNALMAIAAAHHAGVEVQGACEALGKFVNANRRLEVKGEVNGITVYDDFAH
                     HPTAIEATIDALRGKVGKNQRILAVLEPRSNTMKMGVHKDEIAPSLHDAEAVFVYQPD
                     IIAWSVSEITNVLSQPAYWSANIDDLVDLVVKEAKPTDHILVMSNGAFGGIHQKLLAK
                     LADK"
     gene            complement(18730..19485)
                     /locus_tag="PXE50_000883"
     CDS             complement(18730..19485)
                     /locus_tag="PXE50_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HDL5621814.1"
                     /translation="MKLKSFKPMFMLLSVAFLTACSSSINPETGVRDDPLEGFNRAMW
                     KVNYDYLDPYVLKPVAKGWKEYVPSPVKTGLINVANNLDEPVSFVNRLIEGEGKKAMV
                     HFNRFWINTVFGLGGLIDWASLDEGLRLNNGQRGLGESLGAHGVPSGSYIMMPAYGAT
                     TPRQGIGSAVETGYSVLTYVGSPWSIAKFVVQGVDTRSKLLEQDALLEQAQDPYVTFR
                     EAYFQNLEFKVKDGNVEQSQQEQLSEEELKNID"
     gene            19640..19957
                     /gene="metJ"
                     /locus_tag="PXE50_000884"
     CDS             19640..19957
                     /gene="metJ"
                     /locus_tag="PXE50_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="met regulon transcriptional regulator MetJ"
                     /protein_id="HDL5621815.1"
                     /translation="MADWNGEYISPYAEHGKKSEQVKKVTVSIPIKVLEILTNERTRR
                     QIKNLRHATNSELLCEAFLHAFTGQPLPNDEDLMKDRADEIPEAAKQKMCELGIDPDE
                     WQY"
     gene            20005..20235
                     /locus_tag="PXE50_000885"
     CDS             20005..20235
                     /locus_tag="PXE50_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF997 family protein"
                     /protein_id="HDL5621816.1"
                     /translation="MYQQLTTEARWAVLLTLIYLLGWVGFAYFSPQGRGIFGFPIWFE
                     LSCIFLPVLFSLVATIVVKKVYKNIDLEVNNE"
     gene            20228..21652
                     /gene="panF"
                     /locus_tag="PXE50_000886"
     CDS             20228..21652
                     /gene="panF"
                     /locus_tag="PXE50_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/pantothenate symporter"
                     /protein_id="HDL5621817.1"
                     /translation="MNSEMILPLIAYLIFVFGVAFYAYRKRQGGSFISEYYIGGRSMS
                     GFVLAMTTAATYVGASSFIGGPGAAYKYGLGWVLLAMIQVPAVLLSLGALGKKFALLA
                     RKHNSVTINDMLLARYQNKFVVWIAGLALLLSFFAMMTVQFIGAGRLLETTLGIPYQT
                     AVMIFAITVGLYTFIGGFRAVVLTDTIQGLVMIVGTSILLAGVIYATGGVENAMHTLE
                     AINPQLTTPYGIDERPLDFTFMTSFWVLVCFGLIGLPHIAVRSMACKNSQALHRAMII
                     GTVVIAILMFGMHLSGVLGRAVVPDLKVPDQVIPTLMVQVLPPVVAGIFLAAPMAAIM
                     SSIDSMLIQSSSTLIKDLYLAIKPNAINNEKKIKLFSTITTLTFTVLLVFAALTPPEM
                     LIWLNLLSLGGLEATFLWVIVLGLYWEKANATGAIYSMLAGLSCYVLMTTFKIAIFSF
                     HAIVPSLLIGLIAFLIGNRFAPKV"
     gene            complement(21729..22919)
                     /gene="nhaA"
                     /locus_tag="PXE50_000887"
     CDS             complement(21729..22919)
                     /gene="nhaA"
                     /locus_tag="PXE50_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HDL5621818.1"
                     /translation="MEKLKEFLKSEASGGVLLLVFAFAAIVCANTSLSDFYFEFLQTI
                     VSVQFGEFALNKPLLLWVNDGLMAVFFTLVGLEVKKELFEGSLSSYKKAIFPAIAAVG
                     GMIVPAIIYWAINQNHPEYHNGWAIPMATDIAFAVGIVALLGTRVPLALKAFLLALAI
                     IDDLGAIVVIAIFYSQEISVQALTIAAIAIIGLVLLNRFKVTSLCAYLVVGLVLWTSV
                     LKSGVHATLAGVIIGFCVPLKGKHGERPAEELEHILAPWCAYMILPIFAFANAGVYLL
                     EMGMEQLSSPLPLGIALGLIIGKTLGVFGFSYLAVLFRLASLPQGVNFKQIFAIAVLC
                     GIGFTMSMFLASLAFDVSEAGESITALARLGILLGSAVSAILGYTLLRMATKQNNPEN
                     NATY"
BASE COUNT         6565 a         5158 c         4301 g         6912 t
ORIGIN      
        1 gctactgtaa atgtagaatc tttcggctca ttaatataat caaggaataa atttaaatcc
       61 ctttcattat tactttctgc agattttatt gctaaataat gtgctgcaca attcttccag
      121 catagttcaa aattacaagg aggctgccgt tctgcaattt catataaata attaacagaa
      181 ttttggattg ctatagcaaa cccatgcttc actgctttat gatcatattt cgtatgtaca
      241 tttttcataa aaacctcaat ttgttaaaga aacctactgt taagtaggtt tcttatttac
      301 tacaaattaa ttatggctaa aagaccaacc tgcgataaca gatttaattt ttaatagctt
      361 ttttgaatct acttttttca taaaaaaatc ctcatatatt gattaataga taggtttgtg
      421 cattgcacat ctctatatgt ccttcaaaaa aaacaaaaca tcaacaaaaa attaacaaaa
      481 ccataatatt tttattgatt ttgtgaagca tgtcacattt tatgatttaa ttataggctc
      541 actaccttac actcttgagc tgtaatatac tatttaactg cggtaataac tgcacgatca
      601 gtctgagttg ttgtatcaac actaaggcga ggtcattttg cttttgctga ttttcttgct
      661 caaattgggt gaggtcttgg tcgatagcgg tcaatttttc cgataatttt gcaaatgaac
      721 ggctctctga ggcaatttgc ccgatgatgt ttgccacctc tctggcgtgt gagaagaaca
      781 ttgcggaaaa atccacttgt tgattaatct ctcggctagc aatacggtaa gcccctaagg
      841 tggaaatata acccagcaag gtgtaagcaa tacctaacaa ttttggggcg aaggttaaat
      901 cgttcgcata tttttgtggt tcgctgtaca tattggtaat cgcattactc agtgccgata
      961 aatggttatg cacatcacgg cgggcaatac ggtaaggcag ttgctcgtta taaccaaact
     1021 gcaactgggc gataatatgg cgtaaatatt gcccactggc tttcaagccg ttatgtaagt
     1081 tacgttgtaa atttaaatac ttccaatccg gccataagaa tgccactgcc agccacgcaa
     1141 tcgctgtacc tagtaaggta tcaagcattc gcattaagat gccgctttca aggctcacgc
     1201 ctgcaatatc aaggcttatc attaccaaca cagtgatata aaaggttgaa aagccataat
     1261 gtaccaagcg gaaaaaggta taaagcgaac cggtcagtac gattagccca agctgggctt
     1321 cgaggctgag cgccacgtta aacagttcaa aagagccacc aaccagcacg ccgaaaattg
     1381 tgccgatcac acgctgaatc agtcgggtct tagtagcagt gtaattcggt tggcagacaa
     1441 aaatggctgt gagtaaaatc cagtagcctt tgctatcaaa gcctaaaatc ggcacaatcg
     1501 cactgcacaa cagcaccact atcgacaacc gaacggcgtg tcgaaacagt tgggattcaa
     1561 aggttaaatg ggctttaatt gcttggctga tattgcttaa gccggtaata ttttcggcga
     1621 tcaagcggtg agattttgtg aaatttttac ttaacggttc aatatgctca ccactgcttg
     1681 agccttgttc aatctgggct agttgccgct caatattgcc taaattttct gcaatagcac
     1741 gccagcgata agcacttttc aagccccgtt cttgatgata attcaatgaa ttaagcaagc
     1801 cctgcaaggc tttttcgcca cgaacgccgt gttcatatac ttctctatgg cgtaacgaca
     1861 ttgcaatttt ttgacacgcc gcagcctgta attccagcac ccgttgaaag cggaacatta
     1921 aatcactgtt acttaattgt tggaacagtt cgtgatattg ataatggctg gaacttgccc
     1981 gctctaaaat atcttgagcg gtgaaatagt aacgcaacat tcgctgtgtc cgttgctgct
     2041 tgtgctggcg gcttaggcgg tagaataggg caactctggt tttatcaaag gcagccatca
     2101 cctcactatt ggctttcgcc aaggctagtt gtttggcagc taaatcgtca tcatcagggt
     2161 caaaataggc agatttcgcc agtaaataat ggctcaacgc aaggtaggcg gacgctaaat
     2221 tctcctgcac ggttcgattc gggaaaatca ggtacaccaa aataccgacc aaaccataga
     2281 gtaaggtgcc aagtaagatc atcaccacat tgtgatacca caatacttcg ggcgtataag
     2341 ccaggctgtt ataaaccgcc acaatcagcg tgccaaaagc aatggtacta tagcgttgcc
     2401 cgattgcccc taacattacc agcaaaaagg tgcaaaccac cgccaccggc acaaacagcc
     2461 agcccaaatg gagcgacaca ctcgccccaa tcgaggaaag cgagaacgcc actaggctga
     2521 taatcagatt tttcgctcgt ccgattaggc tgttgtctaa atccaccaaa ccgccggcga
     2581 taatgcctaa catcaacggc atcgcaaaat cagaaatacc gagctgccaa atgctgaccg
     2641 ccgcaatgtt tagcgaaata aacatcggca gggttttaat tacattttcc gaaagccaac
     2701 tgtgttgtag atatcttaaa aatttattca tatttgctca tttcgggcag gcacaggacc
     2761 tgcccctacc tacactaccc caaacgttct gccaaatagc catcataatc cggcacattc
     2821 acgctgattg cttgattgaa caaatccgca tttaacagaa aattagcggt ggtttcgtta
     2881 atcgccaccg gaatattcca aacggtcgca atccgcatca gggctttcac atcaggatcg
     2941 tgcggagcgg cattcatcgg atcccaaaag aacaccagca gatcaatttt cttttctgcg
     3001 atcagcccgc ctaattgctg atcgcccccc atcgggccgc ttaacaatga agtaatttca
     3061 agccctgttt ctctggcgag caaatgcccg gtagtgccgg tggcatatag cttatgcgag
     3121 gcaagttggg cttgatgagt ttgtgtccaa cgaattaaat cttgtttaca gctatcgtga
     3181 gccactaagg caatctgttt ttgttttgcg atggttctga cggtggtttt catttttagc
     3241 tcctttgcaa aatttttcac aaatcatacc gcttattttt cgcttttgca ttgactaatc
     3301 acggcttatg gctaaaatca ggtaaaaatt cgcattttaa aacaaaggat taaccgcaat
     3361 gaacttatac aacatcaaac accctgaaga acaagtcaat ttcgcccaag cggtacgcca
     3421 aggcttaggc aaaaatcaag ggctattttt ccctgaagtg ttacctaaat tagatagcat
     3481 tgatgaatta ttggatttac ctttggttaa acgcagccaa aaaattcttt cagccttaat
     3541 cggcgaagag ttaccgcaag aaaccttaaa tgcaatggta aaaaatgcgt tcactttccc
     3601 ggcaccgctt gccaaagtca atgatgatat ttatgcgtta gaattatttc acggtccgac
     3661 tttagccttc aaagattttg gtgggcgctt tatggctcaa gccttagcca atgtacgagg
     3721 agacggcaaa attactattt taaccgctac ctcaggtgac accggtgcgg cggtggctca
     3781 tgctttctat ggtttggaaa atatcaacgt ggtcattctt tacccgaaag gcaaaatcag
     3841 cccattacaa gaaaaattat tctgtacctt aggcggtaat attcgcactg ttgcgattga
     3901 atccgacttt gatgcttgcc aagccttagt gaaacaagcc tttgatgatg ccgagctacg
     3961 ccaagcgatt ggtttaaatt ccgcaaattc catcaacatt agccgtttac tggctcaaat
     4021 ttgctactac tttgaagcag ttgctcagtt accaaaagaa aaacgagata acgtagtggt
     4081 ttcagtacca agcggtaatt tcggtaactt aaccgccggc ttaattgcca aaacattagg
     4141 tttaccgatt aaacgtttta ttgcctcaac caatgccaat gacaccgtgc cacgctattt
     4201 acaatcaggc aaatgggaac caaacgcaac cgttgcaacc ctttctaatg caatggacgt
     4261 aagccgcccg aacaactggc cacgagttga agaattattt aaacgcaatg gctggagttt
     4321 gtctgaattg ggttctgccg cattaaacga tgccgaaacc gaagcggctt tgaaagctca
     4381 atatgcagaa ggttatctgt gtgagcctca cggtgctatt gcttaccaaa gcttgaaaga
     4441 tcagctacaa caaggcgaaa ccggtatttt cttatgcacc gctcacccgg caaaattcaa
     4501 agagtcggtg gaacacattt tagcgattga attgccgtta ccggaagcat tagataagca
     4561 caacaaactg ccactgttat ccgatgaaat ggcagcagat tttgcaacat tgcgtgcata
     4621 tttgttgaaa taaatattca ataatagaaa agggattaag tattaaactt aatccctctt
     4681 tttatgcatt acaagcggtt atatttgcct attattttgc aaaataagca gctaactcat
     4741 cactaccgcc aatatattta ccgccgataa atacttgtgg cacagaggtt ttacctgtaa
     4801 ttgctcgtac agaaattgtg cttgcatcac gacctaacac aatctcctca aaagtatagc
     4861 cttgctcttt taataatgct tttgcttttg cacagaacag gcaacccggt ttagtgataa
     4921 tcgaaacaga ctctttagct gtccaatttg gacttaaata tttaatcatt gtatcggcat
     4981 ctgatacttt aaacggatcg cccggttctt gtggctcaat aaacattttt tccacaatac
     5041 cgtttttcac cagcatcgaa taacgccaag aacgtttacc aaacccaagg tcatttttat
     5101 caactaatag ccccatacct tctgtgaact caccattacc atcaggaata acagtaatat
     5161 tttcagattc ttgatctgct ttccaagcgt tcattacaaa ggtatcatta actgacatac
     5221 agatgatatc atctacccct aatgccttaa attcacaagc taattcatta tagcgaggca
     5281 aatgtgttga tgaacaagtc ggtgtaaatg ctccgggtaa tgaaaacaca accaccgttt
     5341 tgttattaaa taactcatcg gttgtgacat caacccaagc atcgttttga cgtgtacgaa
     5401 atgttacact gggtactttc tgacccgtca tatctttaaa agacatatta atgttctcct
     5461 atagaattat atattacaaa aatcttaggc attatactca caaatatggc ataattcagc
     5521 ctatcagaac aataggaaaa atttaaattg gaggaatcaa gtgaatattc gagatttaga
     5581 ataccttatt gcacttgcag aacataagca tttccgtcgt gcagcagaat cttgtaatgt
     5641 tagccaacct actttaagcg ggcaaattcg caaattagaa ggcgaactag gcactattct
     5701 gcttgaaaga accagtcgca aagtcctctt tacgcaagca ggcttaacat tagttgaaca
     5761 agccaaggta gttttacgtg aagtaaaaat tctaaaagaa atggcaagca accaaggtaa
     5821 agagatgtct ggcccgcttc atgttggtgt aatcccaacc ttggggcctt acatttcgcc
     5881 aattattgtg cctgcattaa aagcagaatt tgcagattta gagctgtata tttacgaatt
     5941 acaaaccaac caattattag atcaacttga atccggccag cttgattgtg gcattatctc
     6001 atttgtaaaa gagagtgaat cttttattga agtgcctatc tttaatgaag aaatgtactt
     6061 ggtagttcca gaacaacacg aatgggcagc gcttaaaaaa ttcgatatga atttattaaa
     6121 aaaccgtgag ttgctctttt tagacagtgg ccattgttta cgcactaata cgctagacta
     6181 ttgtctatcc attggagcaa aagaaaatcc acactttaaa gctaccaacc ttgaaacctt
     6241 acgcaatatg gtagcagcaa atgttggcct agcattgatt cctaaattag ccgctaaacc
     6301 gattaaagga gtacattata ttccacttga aaacccgaaa ccgtttcgag ctgtgggaat
     6361 ggtgtatcga ccaggttcac cattacgcgc ccgctatgag cgtttagctc aagccattac
     6421 taaaattatg caatccgagg cgtaaaaatg gcaaacggta tgagtgtgcg cgcaattcag
     6481 aaagaaaaaa cacgcagagc attagtagaa gccgccttta atcaattaag ctcagaaaaa
     6541 aatttctcta atctcagttt gcgtgaagtt gcacgtgaag ctggagtcgc accgacttcg
     6601 ttttaccgcc actttaaaga tatggacgaa ctaggcttag caatggtgga cgaatccggg
     6661 ctactattac gccaattaat gaggcaagct cgaaaacgaa ttgcaaatgg cggaagtgtt
     6721 gtcgtggttt cagtggaaac attcttcgaa ctgattgccg accgccctaa cgttttccag
     6781 ctattactac gcgaaagctc cggtacatcg caagcgttta gaaccgcagc atcacgcgaa
     6841 attcaacatt ttgtagctga attggcggac tatattatga gcaaagataa tcacagtaac
     6901 cgagaacttg cttatattca atcggaaggt ttagtcacgc tagtatttac tgccggttct
     6961 catgctttgg atatgaacaa tcaagaacgg gaaaaactaa agcaacgtgt cattatgcag
     7021 ctaagaatgc tgattcgtgg ctccacctat tatgccaata aacaagcttc atcaacataa
     7081 aaaaacagac gcctaagcgt ctgtttttat tctttcgtaa tatatgcagt cgatagcttt
     7141 aaccattcta gtgctaattg atgatgttca gataacgcat tccataacgc atcttctgac
     7201 aagatactat aattgccttt agtatctaac tgttcatcaa aactatcatg taattcacgc
     7261 cattccgggc tagcataaaa ccgacttaag ggttccaaaa gtgcagaagc tcgtttccat
     7321 tgctcaatcc ccttttccaa ttctggtaat agctctaccc attggttata acaatcctgc
     7381 attttctgaa tatctgcttt tttcattctt taccgcttac accataaatt ttagcctcaa
     7441 tataacataa aaatcccctt ccgaagaagg ggatttcaac tcaattaggc taaattacca
     7501 ctggtatcca acgcctacac cgccaccaaa gtcgcctcgg ctattcgcat taccttgtaa
     7561 tttcaagata agcttaccgt tatcacttga acgtgaataa cctactgcaa gcgcgttttc
     7621 acctttaaat gtaccacctg ctgcagccac catagattta cctggaatgt aaacctgcgg
     7681 taacgctgct gctgcatttg aaccggcaat accagcacgg gcttcacggt tattacgatg
     7741 gatcttgtta tttaagtgat taacagcacc ttttaactga ccaacattaa cagcatcggt
     7801 atctgcctca cctgctttaa cattagtaat acggttacca ccattattta agccatcttt
     7861 cgttaagctt accgcttttc ctgcagagcc attattaatg gttacgccat tattgttcac
     7921 caatgtatca ccagtcttgc tagtaaattc aggggtatct gaaacggcta cagttacatc
     7981 agaaccttta cgtgtcactt tgatattatt acctgcattc acgctcactg tactacctgc
     8041 ttttactttc gcaggggctt tatccccttc aaccgcacct gtaccaactg ctttagaatc
     8101 tacgttccag cttacgttgt ttacggcatt tgctactgtt gttgcattca caaagcgtga
     8161 accggtaccg ttaggatctt gaacattgat tttgccgtta tcagcaacgg ttaaatctgt
     8221 gatgtttacg ttcactttca cctcaccagc cttatcactg gtaatagttg taccattacc
     8281 atttacgata ttgatagaac catcttcatc agtaccaatg ttattaccat tcactttcgc
     8341 atagttgttc agctgtttac cgttgataac atctgtgctt actgggctaa tatcgccatc
     8401 tgctacatta gtgatcttag ttggtttacc gtctttatca ccgactttga tgttatcacc
     8461 atcattagtg attttcggac cattctcact gaactgtacg ctattgaagc tcacatcttt
     8521 tgctgtcgca aaagtaaatt gattaccatc acgtttaaca gttaagttat cacctgcttc
     8581 aaacacaact tcttcgcccg ttttcactag cttagtcgca gcttggtcac cggcagcctt
     8641 attacctgca gatttaatat taaagcctgc attattcact gcatctgcaa cagtttgagc
     8701 aatcaataac gcatttggct gagttggtgc tttcaccgta ccatcttcgt tgttacctaa
     8761 ctcactggta tttgcagtga tgttaccttc attatctact ttaatagtag taccgtcagt
     8821 tttcgcttca acgttataag tagttgaacc atcagcattc gtgctaggtg tgatagttac
     8881 acctcggtta ccgcccactt tcgtagtagc tgcattagtt gccgcttgta aatcacctaa
     8941 gttcactacg ttgtttagct tgtcgccttc agcattttta atcgcttctg cacggtcttt
     9001 accctctggg gttgagccat cttcgttacg aacactactt gccacattgc ctaattgaac
     9061 aggggcttca cctgtgaatt tagccgtatt gcttggcgtt gagctatcag taggatcttg
     9121 gtttacaaac tcaatcgggc tatctacttt aatcgtattc ttaccgtctt tgttttcaac
     9181 cgtgaccgtt gtacctttac cgttaataaa atcaaccgtg tcattatgta ccacagtatc
     9241 aaccgctttg ccgttacctt gtaaattcca gcctgcattt aatacatcac ctaatgttgc
     9301 tgcattactt aacttatcag ctaagttggt tggattattg tctgctggtt gaaccttatc
     9361 atctgcagtc acaggtatca gattagacgc aacattgcta atcgctttat tacctgcatt
     9421 gataccatct ttattgatag taattggatt atttgcagga tctgcttcat cagttggtac
     9481 agttacagtg ttagaggtta cgctgctaaa cttaacatca tctttagtcg cataaatgac
     9541 tttaccatca gcttcttgct tcacagttaa gtttttacct gcaaccattt caactgcttt
     9601 acccggatta atcagttcat caccacctga aagcttctct ccaccttcta cagccgacgt
     9661 tttcaacgta aagcctgagt tattgatggc gttggtaata tcacctgctg tcactaattt
     9721 cttagcatca tcagcggttg gttcatcaat tctaccgtca ttatttgcat catttaatgc
     9781 cgtagtgtta gccttgatcg caccggttgt aggatctttt acaattgtta catcgtccgt
     9841 attcacagaa agatcgaaca cattcgcgcc atcagcattt tttgtcgtgt taaccgtaac
     9901 tgatttatca gtcgacttca cttcttcacg agatgccata gcgaaagtat aaagctgact
     9961 accatttact gcatctttac tatctgcatt tacgtcaccg gcagctacat tagttacttt
    10021 gactgcatta ccgtctttgt caccaacatt gatattacca ccattgttag taatcttagg
    10081 accttcattt ccgaactgta cactatcaaa attcacattt tttgcagttg aaacagtaat
    10141 gttattccca tcacgggtaa tctcaatgtt tttaccattt aagaactgaa ccgtatcacc
    10201 tgttttcacc aggctcttct cgtcaccgtt tgctttaatg ttaaaacctg cattgttaat
    10261 tgcatctgca acggttttag ctgttactaa tgcatttggt tctgtaggct cttccacttt
    10321 accatcaggg ttatttgtta actcgctggt gtttgccgtg atttcgccct tatcgtttac
    10381 cttaatggtt gtaccatccg tttttgcttc aacggtataa gtggttgagc cgtcatcgtt
    10441 agttttagat gttacagtaa cacctttatc accttccact ttggtggttg ctgctttcat
    10501 tgctgcttgt acatcaccca cattcacagc attattcaac gtatcacctg ttgcgttgtt
    10561 aatattatcc gcaatcgctt tacgctctgc atctgttggt gctgctttat ctgcaaatgt
    10621 accacccacg ccgctcttca gattagtgat tgagcctgtt gtatctggtt taccattgct
    10681 catatcaatg ctgttgaatg caacattatc tttcgttgtg taagtgaatt taccgtcagc
    10741 ttgggtaagt gtcatatttt tacccgcatc aaaggtaact gtttcacttg gcttgattag
    10801 ctgtgttttc ttacctttgg tttcaccacc atcaacacca tcacctgctg ttacattaaa
    10861 gcctgaatta ttgattgcat tagcaatatc acctgccgtc actaatttct tagcatcgtc
    10921 acctgtaggc tcagtaactt taccttcagg agaattattt aatgttgtgg tattcgcttt
    10981 aacttcgcct gttgtcggat ctttcacgat agtaacgttg tcagtattca ctgtcatatt
    11041 accgtcatta tcacgaccga tagatttatc cgttgcaaca tctaccgtat attcagtatt
    11101 gcctttatca tcttcctttc cggctttaac agttacggct ttagaaccag ctactacaga
    11161 tgaggttttc tctgaattat taattgcatc agccacatta ccacgagtta ctgtaggagc
    11221 acctgctttc gctacatcta ccgtatagat tgtttgacca ttatcacctg tttcaggtgc
    11281 accaacagtt gctaaacctg aacctttcac ttcggttttg tgacgctgct gcttgtttta
    11341 actgacttac attcaccgca tcagtatcag cttcacctgc tttcacgcct gtaattttgg
    11401 ttggattacc atcattacct gcaatattaa cattaccatc tttattcgtg attttcgggc
    11461 cattatcacc aaatgttacg ctatcaaatt tcacatcttt cgctgtttcg tacgtgaata
    11521 tagtgccaac acgtttaact tttaagttat cgcctgctgc aaaaatcact ttttcgcccg
    11581 gattaatcaa ctctgctgct tcttgatcac catcagcttt attgccacca gattttgcat
    11641 tccaacctgc tttttgaatc gcttcagaaa ctgtttttgt agttgcaact ttatcttctt
    11701 ctgcaggtgt agttactgca cctgttgtgt tatcaaccgt gatagaaccg gtatccacat
    11761 caaaggttac tttacgccat cagcttcttg tgtaacattt gaaactgtac ctttaccgtt
    11821 tacaaattgt acagattcat ttggggtcac tgtgcctttg gtttcacccg cattatcttt
    11881 aatattgaaa ccttggttta catagttatt taagttcgta attgcatcgc caacgtttgt
    11941 tgcagtatta ccatactgag ttccagctgc attcgttaca ttatatttag gctgagtcac
    12001 agagccatcc ggattcacaa cagaaccgcc accaaaatta tttgcagttg aatttgcaag
    12061 gttactggtt gcattcattg ccatataaag ttgtgaacca ttaatcgcat cggttgatgt
    12121 agcagaaatc tgacccgctg ccacattttg gatttgacgc tctttacctg cagagcctac
    12181 agaaacaaca tagttagtat ctttatttac cccggcaaag ccattataag taataccccc
    12241 taccgttgca ttttcagttg gtgttgctgc ccttacgact gattcgctac ccaaagcaac
    12301 agaactattc agagtagctt gagctcccat acctaatgct gtagcaaatt gagctgttgc
    12361 attagcacgt gtaccaacag ccactgctga ttgtgctgag gcaattgaat ttgcacctac
    12421 ggctaaagag gcatttgcac tcgcatttgc tgcaacacca aaggcagaag ctttttcagc
    12481 cgttgcatta gcattagaac ctaccgctgt agcatcacct gctgtcgcat ttgtttggcg
    12541 accaagtgcg gttgtaccat tagccgttgc atttgctgaa tgaccaactg ccgtagcttg
    12601 aatacctttt gaaaccgtag caacacctaa agataacgct ccgttaccat ttgcatttga
    12661 gtttgtgcct aatgctactg ccgcttgctc tccacctgtt gccgttgcat tcgggccgat
    12721 cgcaattgag tttctgctct tcgcgccatc attagcttga ttctcaggta cggttgaatt
    12781 cacagagaaa tattgaattt ggcttgcttg cgcaggaata ttgacagaaa gatcataaat
    12841 aaccgtgcca tttgcatttc tctctgtact ttttacagtt actgtaccat cgtttgaaac
    12901 aacagtagct tgggtatctt tcgtaaagtc atcaatggct ttcttagtta aaccaatttc
    12961 atagttagtt gtattcgcag cagttgcagc tttacctgtt acagtaatgt aatcagggct
    13021 agaagaattt gccgtggtgt tatacgcatt tactgtataa atagtttgcc catttgcacc
    13081 ggttgcattt gtaatattaa cattgctacc tgcaacaact tctgttttta ccgcttttaa
    13141 tgcttcttca atcgtatttt tatttgttcc accaatatta gtataggtaa cagaaccatc
    13201 aggctttact gtagcattac cacctaaaat atttttagtt gaattagcaa ggttacctgt
    13261 tgcgttcatt gccatataaa gctgtgaact attaattgca tcggttgatg tagcagaaat
    13321 ctgacccgct gccacatttt ggatttggcg tttgatcgtg tttgagccaa cagaaacaac
    13381 attccctgct gccgtagtat tagccgcaaa gccggaataa gtaataccat ttaccgtcgc
    13441 agaaggaact gccacagcgt tggaaacggt tgaattactc cctaaagcaa ccgaattatt
    13501 tagcgctaca ttagcacctg agcctaaggc aatagcaaaa ccggcacttg ctttagcact
    13561 atcaccaatt gcaaccgtag attggttgga agatactgca cttaccccta aagctgtcgc
    13621 attaacacct gaaactgtcg cattataacc aatcgctgta cctctagttg cagtagaagt
    13681 tgcattagca ttagcacttg aacctaaagc taaagaataa gtagcatttg caacagactt
    13741 atcccccatt gcacctgaac ccattgcaaa tgaacgagtg ccactagcgg cagatctcca
    13801 tcccattact gttgaacggt taccagtagc tagagctcct gcaccaaaag ctgttgcacg
    13861 gttacctgtt gcagcagtat ccgtacctaa tgcaatagca tttgctgaag tcgctctagc
    13921 ccccatacca atagcaatag aaggaactaa tgcccaattc tgaccagtgt tattgagact
    13981 ctctacacca atattatagt aatgtaagaa gtatcttctg gatccactaa atttgttcta
    14041 tgcgttgcat tcgtatctgt accaattgca atagtagatc tgccagttga gattgaatcc
    14101 gcaccaatag caattgcgtt ctccgatgat gcagttgctt gtgttgaaat ataattactt
    14161 gttgttgaac ctataagata caacagccac agcatcatta gctcccaaca cggcactagc
    14221 tccagccaat aaagccaatg ttgccttact tgcagaacta acagatttcg ttttaccttt
    14281 cgctcgttgt aattcagata ctgcaaccca actttgtgtt gcctgattcc aaataacttt
    14341 aaaaatttga ttcataatcg accctatata aaaataaaaa agattacgta gaacctatgt
    14401 tcaacataat cttcaccaat ataaaaaacc gccacctatt taagtgaaat aacttactta
    14461 tagactcaga aatttaagtg cgcgtatttt acgctatttg taatataatt catcttctgg
    14521 agtgtaaatt tattgtaaat aatacgagga atctaaccgc ttgttataac gcaaaacacc
    14581 ttgacttaaa tcaagccact acctcatttt gaggggagat ttatacgcag tgaaatttta
    14641 aaataagcta aggtttacgg ataatcgttc aacactattg aattatcact gtagttatcg
    14701 ttaaaaaggt atgcttttat gaaccaattc ttccctctaa tctttagctt aactctattt
    14761 tccggcgtaa ctttggcact agaaaaagca cctcgaacta tgccgacaga aggaataaat
    14821 aagcccctac ttggacaaat tctattcttt gacaatatgc tgtcacacaa cggttcacaa
    14881 aactgctcca gctgccataa tccggattat gcctttattg ataaccgcac tactccggca
    14941 aaaggggtgg tttcacaagg agatactcca accaaattcg gcaaacgcaa ctccccgacc
    15001 atgctttatg cgaaatactc gcctgagttc cactttgatg agcaaagtca agaatatatc
    15061 ggcgggcagt tctgggacgg acgagccaaa aatctcgccg agcaagccgg tatgccgcct
    15121 atcgacccaa atgaaatggg aatgcctaac aaattagaag tagccaaaag attatataat
    15181 gtgccgatgt atcagcgatt tttagggcaa ttttacggtg aaaaggtatg ggaaagttat
    15241 gaaagcgttt atgcggcaat ggaagatgcg attgcgacat tccaacaaga aaacaaactt
    15301 ctcgctccat ttgattcaaa atatgatcta tttttaaaag gcgaggtaca attaactgca
    15361 ttggaagaaa aaggcagagc tttatttttc aataaagctc aaactaattg tagtagttgc
    15421 caccaattac agagtgctgc aaaccaccaa gaagaaacct ttagcaacta tcactattac
    15481 aatgtaggcg tacccggtaa cccagacttg atagcggtta acggcttcgc accagacttc
    15541 gtcgatttag gcttatttga aaacccaaat gttaaaggtg atgaaacaca aaaaggcaaa
    15601 ttcaaaaccc caacattgcg taatgttgcc gtgactgcac tttatatgca caacggtgtg
    15661 tttaaagaat taaagactgt tttgctgttt ttagacagct acaataaccc ggagcgaaaa
    15721 atcaaccctg aaaccggcac ggcgtggcaa caagcagaat ttgaacccac tatcgcccac
    15781 caaaaactca aagccaaacc cttaagcgat gaagaaattg atgccctcga agcattttta
    15841 aaaaccttga cggatgagcg gtatagaaaa taaggctaca agcggtaaaa ttttggggaa
    15901 attttaccgc ttgcgtttaa ctaccgtgtt agctcacttt ctaacttttc caatgcctgc
    15961 aaatcttccc aatctgcctc tttctgtttt aaacatttac gctgaatatc aaatttttcg
    16021 tattgctctc tgacaaagct ttccatttgt ttatgcgtga ttgttccacc atttcctaat
    16081 acagaaaagc cgttaaactc aatcaacata tctacatttc ttcgccagaa acctaacgta
    16141 agatcttggt tgttcttcac acgtaattcg gcactttcaa gaaagatcat taccaagcga
    16201 tttaaagaat ccagctcatt attatctaaa tagtttttcg caatcacaat atcgccttta
    16261 cgcacgactt ttcctttcca gctagttaat cccatattca tcttagtcgc atcagcacgt
    16321 tgacaaatca actcagcggc agtgtgtttg gttattgcat aaatgagctt attttgcgtt
    16381 tctgcaaaaa acatttgcgt atttttatct gttttgtcgt aatcgctaga gagtttgaaa
    16441 agctctcgta ctttttgata gaaacgcaat tcacttgccc gaatctcacg aatctgttca
    16501 agtaattcat cgaaataatc taaacgaccc tgcggatttt tcaaacgctc gctatcaatt
    16561 aaaaaacctt tttcgagata agtgcgtaat gtgctgtttg cccattttct aaactgtact
    16621 gctcttgggc tacgaactcg aaaccctatc gccagaatca tttcaagtga ataatgtttt
    16681 acttgataat tcttgccatc ttgagcagtt atcaagtaat ccttgataac tgaattctca
    16741 tctaactctt tgtcttttaa gatattttta atgtgttcgg atatattttg cacagaggtg
    16801 tcaaaaagtt ctgcaagttg attttgtgtc agccaagctt cattttcaac cactaacaag
    16861 gctacattgc ttttgccgtc ttccgtatta taaataatta aatcgttcat attttattct
    16921 gtttattggt agagatatta gtcgctattt tcaataaaac atgtataaat atccagaatt
    16981 gattttgaat ttttcgatgc agatcacaaa aatagagagt tatacaaaca agcggtaaaa
    17041 ttttgtaaaa aatttaccgc ttgtaaaggt tacttatcag ctaatttggc aagtagtttt
    17101 tgatgaatac cgccaaaggc tccgttgctc atcactaaga tgtgatcggt gggtttggct
    17161 tctttgacga ctagatcgac taaatcatca atatttgccg accaatacgc cggttgcgat
    17221 aacacattgg taatctcgct cacactccac gcaataatat caggctggta aacaaacact
    17281 gcttcggcat cgtgtaggct tggggctatt tcatctttat ggacacccat tttcattgta
    17341 tttgaacgag gctctaacac tgccaaaatg cgttgatttt tgccgacttt accacgcaga
    17401 gcatcaatag tcgcttctat cgcagttggg tggtgagcga aatcatcata aacggtaatg
    17461 ccgtttacct cgcctttcac ttccaaacgg cggttagcat tcacaaactt gcctaatgcc
    17521 tcgcaagccc cttgcacttc aacccctgcg tgatgagcgg cggcaatcgc catcagagca
    17581 ttatgcatat tgtgcttgcc gataatcgac caatgcacct cgccttgttt aacgcctaag
    17641 tgaaacacct caaactgtga gcaatcggca tttaacggtt tagcaaacca ttcgttctgt
    17701 tcgccaataa attgaagctg gctgtaactg cccattttta gtgtatcttg cacgttttga
    17761 tcagcgattg ccgacaaaat acagccactt tgtggcatcg tgcgaacaag gtggtggaac
    17821 tggcgttgaa tcgcttttaa atcatcaaaa atatcggcgt ggtcaaattc catattattg
    17881 ataatcagcg ttttcggggt gtaatgcaca aatttagaac gcttatcaaa gaacgcagaa
    17941 tcgtactcgt ccgcctcaat cacgaagaat ggactgttac cggcacgagc cgaaatgccg
    18001 aaattaccgg caacaccgcc aattaaaaag ccggtatcaa tcccattttg gtctaaaatc
    18061 cacgctaaca ttcctgttgt ggtagttttg ccgtgcgtgc cggaaaccgc cagcacccat
    18121 ttgtctttaa gcaaatgatc gtgcaaccat tgcgggccgg aggtgtaatt gagttggttg
    18181 tccaacacat attccacgca cggattacca cggctcatcg cattaccaat caccactaaa
    18241 tcaggagccg gttgcagttg agcaacatcg taattcggga taatttcaat accgtgagca
    18301 gctaaaaagg tactcatcgg tgggtaaaca ttagtgtctg agccggtcac tttatagcca
    18361 agctcacggg caatcattgc cacaccgccc ataaaggtgc cgcaaatgcc taaaatatgg
    18421 atatgttttt tcatcttttt atatttaaaa tgttagaatc atcccctctc cccttgtggg
    18481 agagggatag attttttctt cgtgcagaag aaaaaatcag ggagaggggt aagcggtcat
    18541 ttttaggctt aatattgtaa gctccctctc tctgaaaaat atttctgaac gaaatatttt
    18601 tcggtctcaa tactcgctac gctcgctcct gtggagccgt tggcaaagcc aacgttcaaa
    18661 tgtaaacatt tgtcccacaa ggggagaggt gcgctttaga tgaggcgtac catccctcgt
    18721 tcacatcaat taatcaatat tcttcaactc ttcttccgaa agctgctctt gttggctttg
    18781 ctcaacattg ccatctttca ctttaaattc aaggttttgg aaataagctt cacggaaggt
    18841 aacataaggg tcttgagctt gctctaacaa cgcatcttgt tctaataatt tagaacgggt
    18901 atctacccct tgtaccacaa atttagcgat agaccaaggt gacccaacat aagtcagcac
    18961 cgaataaccg gtttccaccg cactaccaat accttgacga ggtgtggttg ctccataagc
    19021 cggcatcata atataggagc cggaaggcac gccgtgagcg cctaaactct cacctaaacc
    19081 acgttgtccg ttatttaaac gtaacccctc atctaaactc gcccagtcaa ttaacccacc
    19141 taaaccaaac acagtgttga tccagaagcg gttgaagtga accatcgctt ttttaccttc
    19201 tccttcaatt aagcggttta caaagctcac cggctcatca aggttattag caacattaat
    19261 taagcctgtt ttaaccgggc ttggtacata ctctttccaa cctttagcta ccggttttaa
    19321 cacataaggg tctaaatagt cgtaattgac tttccacatc gcacggttaa acccctcaag
    19381 tgggtcgtct cgcacgccgg tttctgggtt aatgcttgat gaacaagcgg ttaaaaatgc
    19441 cacactgagt agcataaaca tcggtttgaa cgacttgagt ttcataaatt gaaccttttg
    19501 cagagaaatt tgtccattgt agcgaagttg ataaaaaata caaaacaaaa agccgttttg
    19561 cctctagaaa tctagacgtc tagattgaga tatagttcgc ttttgattac aatacaggca
    19621 acatttaagg agcaaacaaa tggcagactg gaacggcgaa tatattagcc cttatgccga
    19681 acacggcaaa aaaagtgaac aagtcaaaaa agtgacggta tccattccaa ttaaagtatt
    19741 ggaaatttta actaatgagc gaacccgtcg ccaaatcaaa aatcttcgtc acgcaaccaa
    19801 cagcgaatta ttgtgcgagg cttttttgca cgcctttacc ggtcagcctt tgccgaatga
    19861 tgaagacttg atgaaagaca gggcagatga aatccctgaa gcggcaaaac aaaaaatgtg
    19921 tgagctggga atagacccgg acgaatggca atattagaca caccttgcaa ctgcgaggtt
    19981 ctttttatgt tttaaggaga ctttatgtat caacaattaa caacagaagc acgttgggct
    20041 gtgttgctta cgctgattta tctgctcggc tgggtaggtt ttgcttactt ttcaccgcaa
    20101 ggcagaggca ttttcggctt tccgatttgg tttgaacttt cttgcatttt cttacccgta
    20161 ctatttagct tagttgccac cattgtcgtc aaaaaagtgt ataaaaatat cgatcttgag
    20221 gtgaataatg aatagtgaaa tgattttacc cctgattgct tatttaattt ttgtgtttgg
    20281 cgtagcgttt tatgcttacc gtaaacgcca aggcggaagc tttatttcgg aatactatat
    20341 cggtgggcgt tcaatgtcgg gctttgtgtt agcaatgaca accgccgcca cttatgtggg
    20401 ggcaagttcc tttatcggtg ggccgggtgc tgcctataaa tacggtttag gctgggtgtt
    20461 actggcaatg attcaagtgc ccgcagtgct actctctctt ggagcattag gcaaaaaatt
    20521 tgccttactt gcccgcaagc ataatagtgt caccattaac gatatgttat tagcccgtta
    20581 ccaaaacaaa tttgtggttt ggattgcagg actagcctta ttactttcgt tttttgcgat
    20641 gatgacggtg caatttatcg gtgccggtcg cttacttgaa accacactcg gaatccctta
    20701 ccaaacagcg gtaatgattt ttgccatcac agtcgggctt tataccttta tcggcggttt
    20761 tagagcggtg gtgctaaccg atactattca aggtttagta atgatagtcg gcacaagcat
    20821 tttactcgct ggtgtgattt atgccacagg cggagtggaa aatgcaatgc acacccttga
    20881 agccattaac ccacaactta ccacccctta cggcattgac gaacgcccgc ttgatttcac
    20941 ctttatgact tcattttggg tattggtttg ctttggttta atcggcttac cgcatattgc
    21001 ggtcagaagt atggcatgca aaaacagcca agccttgcac cgagcaatga ttatcggcac
    21061 ggtagtcatt gcaattctaa tgtttggaat gcacctttca ggcgtattag gcagagcggt
    21121 tgtgcctgat ctcaaagtgc cggatcaagt cattccaaca ctaatggtac aagtgctacc
    21181 accggtggtt gccggtattt tccttgccgc cccaatggca gcgattatgt cttcgattga
    21241 ctcaatgttg attcagtcgt cttcaacctt aattaaagat ctctatctgg caattaagcc
    21301 gaatgccatt aataacgaga aaaaaatcaa attgttctcc actattacta ctcttacttt
    21361 tacggtatta ctcgtgtttg ccgccctaac cccgcctgag atgttaattt ggctgaacct
    21421 actctcttta ggtggtttag aagcgacttt cctatgggta attgtactag ggttgtattg
    21481 ggaaaaggca aatgccaccg gtgctattta ctcaatgctg gcaggcttaa gttgttatgt
    21541 attaatgact acctttaaga ttgctatttt tagcttccac gccattgtgc cttcactgct
    21601 aattggtttg attgctttct taatcggcaa ccgatttgct cctaaggtgt aaaataaaat
    21661 aggcatagtg gtatggaagt tcactatgcc tattttgcaa aatttccgct caattcaacc
    21721 gcttgtagtt aataagtggc attattttct ggattattct gcttagtcgc cattctaagt
    21781 aacgtataac ctaaaatcgc tgaaaccgca gagccgagta aaatacctaa tcgagctaga
    21841 gcggtaatac tttccccagc ctcacttaca tcaaaggcaa gacttgctaa gaacatcgac
    21901 attgtaaaac cgataccgca tagcaccgca atggcaaaaa tttgcttaaa attaacccct
    21961 tgcggcaggc tggcaaggcg gaataatact gctaaataac taaaaccgaa tacacctaag
    22021 gttttgccga taattaagcc gagcgcaata cctaacggca atggtgatga gagttgctcc
    22081 attcccattt ctaataagta aacgccggca ttagcgaagg cgaagatcgg taaaatcata
    22141 taagcacacc aaggggcaag aatatgttct agctcctctg ccggtcgttc cccatgttta
    22201 cctttcagcg gtacgcagaa gccgatgatc acgccggcaa gggtagcgtg aacccctgat
    22261 tttaaaacgg aagtccatag cactaagcct actaccaaat aagcacagag tgaggtcact
    22321 ttaaagcggt taagtagcac taagccgata atcgcaatcg cggcaatagt taaggcttgc
    22381 acactgattt cttgcgaata gaaaatggcg attaccacaa tcgctcctag atcatcaata
    22441 atcgctaatg ccaacaaaaa tgcctttaaa gccaatggca cacgagtgcc taataacgcc
    22501 acaatgccca ccgcaaaggc aatatcagtt gccattggaa ttgcccaacc attatgatat
    22561 tcagggtggt tttgattaat cgcccaataa ataatcgctg gaacaatcat accacctact
    22621 gctgctatcg caggaaaaat agctttctta taacttgaaa gcgaaccttc aaacaactct
    22681 ttttttactt ccagccccac caacgtaaaa aacactgcca ttaagccatc gttaacccag
    22741 agtaatagcg gtttattcaa ggcaaattca ccaaactgta cactaacaat cgtttgtaaa
    22801 aactcaaaat agaaatcact taaggaggtg ttggcgcaca caattgctgc aaaagcaaaa
    22861 accagaagca atacgcctcc tgaggcttca gattttaaaa attcttttaa tttttccact
    22921 taactttctc ctatta
//
LOCUS       DANLZQ010000023        22936 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.023, whole genome shotgun sequence.
ACCESSION   DANLZQ010000023 DANLZQ010000000
VERSION     DANLZQ010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 22936)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22936)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22936
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.023"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            45..1184
                     /locus_tag="PXE50_000888"
     CDS             45..1184
                     /locus_tag="PXE50_000888"
                     /EC_number="1.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005557909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HDL5621819.1"
                     /translation="MNALHFGAGNIGRGFIGKLLADARIFVTFADINQTQIDQINQNK
                     QYGVKIVGDDSRVEIVKNIAAINSKDENAVIEQVKNTDLITTAVGPNVLGFIAPLFAK
                     ALVARVESGNTQPLNIIACENMVRGTTFFKGKIFEHLTAEQQAEIEKVVGFVDSAVDR
                     IVPPAEPNPADPLEVTVEEFSEWIVDQTQFKGDIPNIKGMELTDNLMAFVERKLFTLN
                     TGHLICAYLGKQAGVKWIKEAIAIEEIKTQVKATMEESGAVLIKRYGFDPQAHSAYIE
                     KILKRFANPYLNDDVNRVGREPIRKLSENDRLIKPLRGTLEYGLPYQNLVKGVVMALQ
                     YRNEEDPQAVELAEFIANHGVAAAVEKYTGLTDQAVIAQVVELYQ"
     gene            1196..1711
                     /locus_tag="PXE50_000889"
     CDS             1196..1711
                     /locus_tag="PXE50_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MltR family transcriptional regulator"
                     /protein_id="HDL5621820.1"
                     /translation="MMDYIDKLSEETTLRGFLSIANQRFAKAVEQLIERVFRKTDFAL
                     KSVVDSLFEHQGPLADIEVRLKVLLGLGVISPKVFEDISLFLEVKQHLNEEEDEFAFS
                     HPAVVKFAKDLHHIDFLPINELLNMKASAANKDSMLFQMQQMRLEKMVRSSLILAVTE
                     IDEQLNVESPL"
     gene            1851..3716
                     /locus_tag="PXE50_000890"
     CDS             1851..3716
                     /locus_tag="PXE50_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HDL5621821.1"
                     /translation="MQSLLSFVPDFLKQELFWVMALLVFAIWQFIQNKLRMDVVALIV
                     MLFFSLTNILSVKEVLAGLSDPNVVLIALLFIVGEGLVRTGVANQVSDWLMRVSGASE
                     TKVLVLLMLCIAGLGSFMSSTGIVAIFIPVVLAICSGMGISPRRLMMPLSVAGLISGM
                     MTLIATPPNLVAHSELVKSGFEGFNFFSFTPIGLIILVMGIGYMLIARRWLDNGEQSN
                     THSQAQKFSMSQLIEEYQLKERAKMVLVEADSDCVGKSIGQLNLRIEQGLNIIAIQRT
                     KRFRKITVSASVNEIFQPKDILLLDTALDDETYQQRCEQLKLRPIELKGEYFSSQYRS
                     VGMAEISVMPEAECIGKTIRELKFRSRYHLSIVGLKRGDEIIQEELLDTPLKFGDILL
                     VMGVWQQIHRMDDDHRDFFLLRDPAESKNAPPALSQAPHALFSVLTMVLLMITGIVPN
                     VMAALIACLMLGKFRCVDMKSAYDSIHMPSIVLIVGMMPFSIALQKTGGVDLTVRLLL
                     DAMQGLDVHFVLIVLFVVTAIISAFISNTATAILVMPIAIAIANQLGYSPAPFVMTVA
                     VSASAAFMTPVSSPVNTMVLAPAGYKFIDFVKVGVPFTVLVMLVSVFVIPMLFPL"
     gene            complement(4006..4257)
                     /locus_tag="PXE50_000891"
     CDS             complement(4006..4257)
                     /locus_tag="PXE50_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621822.1"
                     /translation="MDKQAILKLFRDNSTAGNSQPSQEPIQVFNNSNVIIQNGDNATV
                     IAGCTVDNNTNLTCADKQRVHDLIHSLEQRNRASRDEGA"
     gene            complement(4269..4751)
                     /locus_tag="PXE50_000892"
     CDS             complement(4269..4751)
                     /locus_tag="PXE50_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5621823.1"
                     /translation="MKIECKKVIGFGNRIEQSRKNAKLSRSEVCDALGGIAISTLQAW
                     EADTREPPISKLMALSQILNVEPCYLLTGERHSQSLNVTREPQPVYATKPQTEEGEVV
                     VIKAKLQEAIETLEEVLEITQREMKPAGKAQMVWAFYELLTQEKSEKEKMVGLLKLVA
                     "
     gene            4935..5198
                     /locus_tag="PXE50_000893"
     CDS             4935..5198
                     /locus_tag="PXE50_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL5621824.1"
                     /translation="MSTLEDIKKTAKDWHRADIIAALHKAGWSLRQLSLKHGYSQSST
                     LKNAVDRPWLKGERIIAEAIGISPEEIWPERYAQRNHKKFADR"
     gene            5214..5744
                     /locus_tag="PXE50_000894"
     CDS             5214..5744
                     /locus_tag="PXE50_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL5621825.1"
                     /translation="MSENSLKTHYSAKELAELSLACLPKTKQGVLYQAKKQGWTTHKK
                     VGVGGEILEFALSNLPQEIQTEIRSRFMSAVVEAKPKKLPAVRAEVDVGNLTTKQREI
                     ADARMALVAYVLELEGSMSRIKAITYLCNLAKQGEMPPHLVELVAVANAKKTAKRTIV
                     PIFSPIMPDFPLDSRD"
     gene            complement(5760..6887)
                     /locus_tag="PXE50_000895"
     CDS             complement(5760..6887)
                     /locus_tag="PXE50_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HDL5621826.1"
                     /translation="MNKLKSINLQVYIMLIAIVVIMSFFSIATDGAYLSARNISNLLR
                     QTSITGILAIGMVFVIISAEIDLSVGSLMGLLGGFAAISNVWWGWPLSLTIIVTLILG
                     VMLGAWSGWWVAYQKVPSFIVTLAGMLAFRGVLVGLTNGTTVSPISNEMTTIGQGYLP
                     DMVGMILGTIGIFCFIVWGSYQRKARQKLNLTVPSMSKDTLKYGLVAIIVLGAIYLLN
                     DYRGVPFPVLVLVILAIAGTFLARKTAFGRHIYAIGGNIDAARLSGISVEKVKLAIFA
                     LNGLLVAIAGLILSSRLGAGAPSAGQNAELDAIAACVIGGASLAGGIGSIYGVVIGAF
                     IIALLDNGMSMLDVPTFWQYIVKGGILLLAVWVDTISKKKA"
     gene            complement(6891..8405)
                     /gene="xylG"
                     /locus_tag="PXE50_000896"
     CDS             complement(6891..8405)
                     /gene="xylG"
                     /locus_tag="PXE50_000896"
                     /EC_number="7.5.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-xylose ABC transporter ATP-binding protein"
                     /protein_id="HDL5621827.1"
                     /translation="MAKLLEMKNITKKFGEVVALNNISISLETGEILSLCGENGSGKS
                     TLMKVLCGIYPAGDYEGEIYFSGEKLIARNIKDTEEKGISIIHQELTLVKNMSILENM
                     FLGNEITKSGITDDNEMYLRCKTLLEQVQLDIDPNTKVGELGLGQQQLVEIAKALNKQ
                     VRLLILDEPTASLTEKETEILLSLIKDLQAHNIACVYISHKLNEVKAISDKICVIRDG
                     EHIGTRSAEGMSEDDIITMMVGREITSLYPHEPHNIGEEVLRVENLTAWHPTNTHIKR
                     VDNANFVLRQGEILGIAGLVGSGRTEMAQCIFGSYQGKYQGDIFLHKQPIKIKNCAQA
                     IENHIVMVPEDRKKHGIIPIMGVGKNITLSSLPQFCFGKKVINEPLEETIINQSIAKL
                     KVKTSSPELAIGRLSGGNQQKAILAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQ
                     LAKEGMAIIVISSELPEVLGISDRVLVMHQGKIKADLINQDLTQEKVMEAALKE"
     gene            complement(8472..9473)
                     /gene="xylF"
                     /locus_tag="PXE50_000897"
     CDS             complement(8472..9473)
                     /gene="xylF"
                     /locus_tag="PXE50_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005576719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-xylose ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL5621828.1"
                     /translation="MKLKSKLLAVATATLMVLSNASVAKDLKIGMSIDDLRLERWQKD
                     RDIFVNKAESLGAKVFVQSANGDATAQISQIENMLNKDIDVLVIIPFNGEVLSNVIAE
                     AKKEGVKVLAYDRLINNADVDFYVSFDNEKVGELQAKSIIGQKPEGNYFLMGGSPVDN
                     NAKLFRKGQMKVLQPLIDSGKIKVVGDQWVDSWLAEKALQIMENALTANKNNIDAVVA
                     SNDATAGGAIQALSAQGLSSKVAISGQDADLAAIKRIIAGTQTMTVYKPITNLADKAA
                     EIAVALGKDEKVEMNAQLNNGMKEVPAYLLEPVVVTKENIDDTVIKDGFHTKDAVYK"
     gene            9715..11034
                     /gene="xylA"
                     /locus_tag="PXE50_000898"
     CDS             9715..11034
                     /gene="xylA"
                     /locus_tag="PXE50_000898"
                     /EC_number="5.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012072255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylose isomerase"
                     /protein_id="HDL5621829.1"
                     /translation="MSNYFDKISKVQYEGANSTNPFAFKHYNPDEVVLGKTMAEHLRL
                     AVCYWHTFCWTGNDMFGVGSLDRSWQKTGDLLQGAKQKAEIAFEFFQKLGIPYYCFHD
                     VDVAPEGNNFKEYQHNFNTIVDILEQKQAETGVKLLWGTANCFTNPRYMSGASTNPNP
                     EVFAWAAAQVFTAMNATKRLGGENYVLWGGREGYETLLNTDLKREREQIGRFMQLVVE
                     HKHKIGFNGTLLIEPKPQEPTKHQYDYDVATVYGFLKQFGLEKEIKVNIEANHATLAG
                     HTFQHEIATATALDIFGSIDANRGDPQLGWDTDQFPNSVEENTLVMYEILKAGGFTTG
                     GFNFDAKIRRQSTDPYDLFHAHIGAIDVLALSLKRAAKMLEDQALQKVVDNRYAGWNQ
                     DLGLQILNGKASLEDLAKIVETQGLDPKPVSGQQEYLENLVNSYIYR"
     gene            11187..12632
                     /gene="xylB"
                     /locus_tag="PXE50_000899"
     CDS             11187..12632
                     /gene="xylB"
                     /locus_tag="PXE50_000899"
                     /EC_number="2.7.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylulokinase"
                     /protein_id="HDL5621830.1"
                     /translation="MYIGIDLGTSGVKVVLLDENQHIIAITQKSLPIFRPHPLWSEQN
                     PQDWWNATNEAMLELSATQDLQAVKAIGLTGQMHGATLLDNADNVLSPAILWNDGRSF
                     MECEELEQLVPNSREITGNLMMPGFTAPKLRWVDKHQPDIAEKVSKVLLPKDYLRLLM
                     SGEYASDMSDASGTMWLDVGKRNWNKSLLNACGLDIENMPKLFEGNQITGYLRPTLAE
                     QWKMKSVPIVAGGGDNAAGAIGIGLYQTGQAMLSLGTSGVYFVVSDKFQANPQKAVHS
                     FCHALPDRWHLMSVILSAASAVDWAVKSLGLKDVSTLFQQVEASQTASDAIFLPYLSG
                     ERTPHNDPYAKGVFWGLSHNDNQITMAKAVIEGVSFALAEGIEVLHETGVVADNIALI
                     GGGAKSVYWRQLLADISGKTFEYRTSGDVGPALGAAKLAQIALNPNQDIATFCQPLPL
                     EQVYQPTPARYAEYQQKRQKFTELYRRLKGL"
     gene            complement(12695..13018)
                     /locus_tag="PXE50_000900"
     CDS             complement(12695..13018)
                     /locus_tag="PXE50_000900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="QacE family quaternary ammonium compound efflux
                     SMR transporter"
                     /protein_id="HDL5621831.1"
                     /translation="MNVWILLAISICLEIAATNLLKLSNGFTKAIPTIGSLALYGLSF
                     YFLSIIFRTLPVGIVYAIWSGVGIVLTALVAYFAFGQKIDLAGLIGISLIIAGVLVIN
                     LFSKV"
     gene            13142..13684
                     /locus_tag="PXE50_000901"
     CDS             13142..13684
                     /locus_tag="PXE50_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase family protein"
                     /protein_id="HDL5621832.1"
                     /translation="MAQVYIVHGYTANADKHWFPWLEQELAKCGVSCERLNMPDSAKP
                     SLDGWLNHLAQNVELTDQTVFVGHSLGCIAILNFLAKNYAKIKGAVFVSGFYQPVENL
                     PELSAFTNYYAILPSVSSFPSYVVSALDDKVVNHQYSDALAQHLHADYIRLNQGGHFL
                     DREGVTELPVVLELVKKLLE"
     gene            complement(13855..14679)
                     /gene="dapF"
                     /locus_tag="PXE50_000902"
     CDS             complement(13855..14679)
                     /gene="dapF"
                     /locus_tag="PXE50_000902"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HDL5621833.1"
                     /translation="MQFSKMHGLGNDFMVVDGVTQNVYLTEEMIRTLSDRHRGIGFDQ
                     LLLVEPPYDPELDFHYRIFNADGSEVSQCGNGARCFARFVTLKGLTNKKDIHVSTAKG
                     KMVLSLQEDGKVRVNMGEPIWEPSQVPFTANKFEKNYILRTELQTVLCGVVSMGNPHC
                     VLQVDDVKTAPVNELGPLLESHERFPERANISFMQVVNRNHVKLRVYERGAGETQACG
                     SGACGTVAVGIMQGLLDNKVQVDLPGGTLIIEWQGVGHPLYMTGDATHIYDGFIKL"
     gene            14828..16150
                     /locus_tag="PXE50_000903"
     CDS             14828..16150
                     /locus_tag="PXE50_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HDL5621834.1"
                     /translation="MSAMFIIQFAIVLLCILVGARVGGIGLGVFGGLGLAILSFGFGL
                     KPAGLPIDVMFMIMAVVSAAAAMQAAGGLDYMIKIATRILRKNPKYITFIAPLVTWTF
                     TVLAGTGHVAYSVLPVIAEVSRHNGIRPERPLSMAVIASQFAIVASPIAAAVVAVVAF
                     LEPQGVTLGNVLSVTIPATLLGLGLACVFVNKMGKELKDDPNYQRLLQDPEYVKENHI
                     TTNPTELPLKPTAKLSVGLFLFGALLVVLMGAIPALRPVFDGKPMGMAHTIEIVMLSI
                     GALIIFFCKPDGNEITKGSVFHAGMRAVIAIFGIAWLGDTLMQGHMDEVKSMVSGLVE
                     TAPWAFAFALFVLSVLVNSQGATVATLFPVAIAIGIPAPVLIGVFVAVNGYFFIPNYG
                     PIIASIDFDTTGTTRIGKYIFNHSFMLPGLLSMIFSIGFGLLLSNILL"
     gene            complement(16198..16557)
                     /locus_tag="PXE50_000904"
     CDS             complement(16198..16557)
                     /locus_tag="PXE50_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CrcB family protein"
                     /protein_id="HDL5621835.1"
                     /translation="MISIGAVLGAMCRWQLAVWLNPILSQFAFGTLAANWLGCLLIGI
                     AMGFNLGESQRLLFISGFLGSFTTFSSFSLELTEKLLAEKWGQFVTVLSLHLIGGLLL
                     TLIGVMLARAVTSGRFC"
     gene            16770..17555
                     /locus_tag="PXE50_000905"
     CDS             16770..17555
                     /locus_tag="PXE50_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin family protein"
                     /protein_id="HDL5621836.1"
                     /translation="MSKSLRNACIGEFIGTGFILFFGAGCVAAAQVAGANFGLWEISI
                     VWGLGVSMAIYISAGISGAHLNPAVTIALAAFYGFEKHKILPYVIAQVAGAFCSVALI
                     YFMYSDLFTAAEAAQGITRGETVGFAGVFSTYPNPNITLVTAFIVEFVITVVLMSTIL
                     AIGDDKNGLPNKALAALLIGLLIAVIGGATGPLTGFAMNPARDFGPKLFAYLAGWGEI
                     ALTGGKEIPYFIIPIVAPICGALFGAWGYKNLIHNNLPANTQE"
     gene            17559..19070
                     /gene="glpK"
                     /locus_tag="PXE50_000906"
     CDS             17559..19070
                     /gene="glpK"
                     /locus_tag="PXE50_000906"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HDL5621837.1"
                     /translation="MEKQYIIALDQGTTSSRAVLLDKNANVVEVAQREFTQIYPQAGW
                     VEHNPMEIWSSQSSTLNEVVAKAGIKPDSIAAIGITNQRETTIVWEKETGKPVYNAIV
                     WQCRRTSDITDKLKADGHEEYIRKTTGLVVDPYFSGTKVKWILDNVEGAREKAERGEL
                     LFGTVDTWLVWKLTQGRVHVTDYTNASRTMLFNIHTKQWDDKMLELLNIPRSMLPEVK
                     NSSEVYGQTNIGGQGGVRIPVAGIAGDQQAALYGHLCVKEGQAKNTYGTGCFMLMHTG
                     NTAIQSENGLLTTIACNAKGEPEYALEGSVFIAGASIQWLRDELKIVHDSFDSEYFAT
                     KEDDSNGVYVVPAFTGLGAPYWDPYARGSIFGLTRGANRNHIVRATLESIAYQTRDVL
                     EAMQSDSKAKLQALRVDGGATANNFLMQFQADILDTKVERPKVKEVTALGAAYLAGIA
                     VGFWKDLEELKDKAEIERTFTPDGDQEKRAKRYKGWKKAVRRSLEWAKEDAEE"
     gene            19222..19764
                     /locus_tag="PXE50_000907"
     CDS             19222..19764
                     /locus_tag="PXE50_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HDL5621838.1"
                     /translation="MSQFQIHTIESAPETAQEALKAVQQANGFIPNLIGVLANAPTAL
                     ETYRTVGGINSRNSLTAEEREVVQITAAVVNGCGFCVAGHTKIALKALKMPEEVVNAL
                     RATARIDDNKLDTLARFTLAVMLQKAKLTEAQLNEFFAAGYNQQNAIDVILGVSLATL
                     CNYVNNIAEIPINPELQPFA"
     gene            complement(19885..20943)
                     /locus_tag="PXE50_000908"
     CDS             complement(19885..20943)
                     /locus_tag="PXE50_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HDL5621839.1"
                     /translation="MSVLSSSFIQWLQQNAENLDQSNERADLLIPQIAALGLYKIGVP
                     ETLGGSGGTLVDAIKAVTELGNHSLAAAFVSWGHRTFIEHIIASKNPIPRQSYLADLL
                     NGNLTAGTGLSNAMKFLSGIEELNVNIREENGKRYLNGRLPWVTNLRSYRFVASFVAG
                     FQDERKPLVIAIPSTAKGLTRTKELEFIALQGTNTTSLVFENVELQDEWILADDAPEF
                     LAATRPAFLGLQFGLPFGLVERSLAEIEKSLPFRAILASEWQAQVDALNDIKTRLFNG
                     LNEEGYFVRNPKELFQARIDIVNVVAQTILLELQASGGRGYLKNDTSGFSRRWKEAAF
                     LPVVTPSAVQLRMVLANS"
     gene            complement(21098..21841)
                     /locus_tag="PXE50_000909"
     CDS             complement(21098..21841)
                     /locus_tag="PXE50_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5621840.1"
                     /translation="MKQKYIYGLAGLLLLLLGWQLGTALLSQRLPMASMLAPAKTWES
                     FTWLISSGEIFPHLWASLQRIAVGLLAALVIGVPLGLLLGFSKHLEMLCTPSFQLLRM
                     ISPLSWMPIIVMLLGVGDLPIYFLLAFATVWSLIISTTSGVKSIDPQWLQLGRVMSAT
                     RKELLCKIVVPAITGHVLTGLRVAVGIAWVVLVPCEMLGVNQGLGYFILDTRDRLAYS
                     ELMAVIIIIGLIGWALDSLIRLALAKGGR"
     gene            complement(21858..22856)
                     /locus_tag="PXE50_000910"
                     /pseudo
     CDS             complement(21858..22856)
                     /locus_tag="PXE50_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250818.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
BASE COUNT         6489 a         4948 c         4951 g         6548 t
ORIGIN      
        1 gggcacagga cccgccccta cgttttatag aggaacaatc atcaatgaac gcactccatt
       61 ttggtgccgg taatatcggg cgtggcttta tcggcaagtt gcttgctgat gctcgcattt
      121 tcgtgacttt tgccgatatt aaccaaactc aaatcgacca aatcaaccaa aacaagcaat
      181 acggcgtgaa aatcgtgggc gatgacagcc gtgtggaaat tgtcaaaaac attgcggcaa
      241 ttaactcgaa agacgaaaat gccgtgattg agcaagtgaa aaacaccgat ttaattacca
      301 ccgcagtcgg cccgaatgtg cttggcttta ttgccccact gttcgccaaa gcgttagtgg
      361 ctcgtgtgga aagtggcaac acccaaccgc tgaacattat cgcctgtgaa aatatggtgc
      421 gtggcacaac tttctttaaa ggtaaaattt ttgagcattt aactgccgag cagcaagcag
      481 aaattgaaaa agtggttggt tttgttgata gtgcggtgga cagaattgta ccacctgccg
      541 agccgaaccc tgctgatccg ttggaagtca cggtggaaga gttcagcgag tggattgtgg
      601 atcaaaccca gttcaaaggt gacattccaa acatcaaagg aatggaatta accgataacc
      661 tgatggcgtt tgtggaacgc aaactgttca ccctgaacac cgggcattta atctgtgcct
      721 acttgggcaa acaagcgggc gtgaaatgga ttaaagaggc gattgcgatt gaggaaatca
      781 aaactcaggt gaaagccaca atggaagaga gcggtgctgt gctgattaaa cgttacggct
      841 tcgacccaca agcccattca gcgtatatcg aaaaaatcct caaacgtttt gccaacccgt
      901 acttaaacga tgacgtaaac cgtgtagggc gtgagccaat ccgcaaactg agcgaaaacg
      961 accgcttgat caaaccgttg cgtggcacgt tggaatatgg cttaccgtat caaaacttgg
     1021 tcaaaggcgt ggtgatggca ttgcaatatc gcaatgagga agacccacaa gcggtcgaac
     1081 ttgccgaatt tattgcaaat cacggtgtgg cggcagcggt ggaaaaatac accggtttaa
     1141 ccgaccaagc ggtcattgct caagtggtgg aattatatca ataattcttg acactatgat
     1201 ggattacatc gacaaactca gtgaggaaac caccctgcgt ggtttcctta gcattgccaa
     1261 tcaacgcttt gccaaagcgg ttgaacagtt gattgaacga gtgtttcgca aaacggactt
     1321 tgcgttaaaa tccgtggtgg attccttgtt tgaacatcaa ggaccgctgg ctgacattga
     1381 agtacgttta aaagtgttgc ttgggttggg ggtgatctca cctaaagtgt ttgaagatat
     1441 ctcgcttttc cttgaagtca aacagcattt gaatgaggaa gaagacgagt tcgcattttc
     1501 tcacccggcg gtagtgaaat ttgccaaaga tttgcaccat attgattttt tgcctatcaa
     1561 tgaattgctg aatatgaaag cgagtgcagc gaataaagat tcgatgctct ttcaaatgca
     1621 gcaaatgcgg ttggaaaaaa tggtacgttc aagcctgatt ttggcggtaa ctgaaattga
     1681 cgaacaactg aatgtggaaa gcccattgta aaaatttcgt caaaactaac cgcttgtact
     1741 gagcattcac gccgtacgtg attgcttttt cctttctttt tgatcttatc ggcttttttc
     1801 tttgcttaaa gcggtgtaat ctatccctaa ctattttgga ggatatggtt atgcaatcgt
     1861 tgctctcttt tgtgccggat tttcttaagc aagaactgtt ttgggtaatg gcgttattgg
     1921 tatttgcgat ttggcaattt atccaaaaca agttgcgtat ggacgtggtt gccttaattg
     1981 taatgctgtt ttttagcctg actaatattt tatcagtcaa agaagtgttg gcaggcttaa
     2041 gtgacccaaa cgtggtgctg attgcgttgc tctttattgt cggagaaggt ttggtgcgaa
     2101 ccggcgtggc gaaccaagtc agcgattggt tgatgcgggt gtcgggagcg agcgaaacca
     2161 aagtgctggt gctgctaatg ctctgtattg ccgggcttgg atcttttatg agttccaccg
     2221 gcattgtggc gattttcatt ccggtggtgc ttgccatttg ctcgggaatg ggaatttctc
     2281 ctcgccggtt aatgatgccg ttaagtgttg ccggacttat cagcggtatg atgaccttaa
     2341 ttgccacacc acccaacctt gttgctcatt ccgaattagt aaaatcaggt tttgaaggct
     2401 tcaatttctt cagttttact ccgattggat taattatttt agtgatgggc atcggctata
     2461 tgctgattgc ccgccgttgg ttggataatg gtgagcaaag caatactcac agtcaggctc
     2521 aaaaattttc aatgtcgcag ttaattgaag agtatcaact taaagagcga gccaaaatgg
     2581 tgctggtgga agcagattca gactgtgtcg gcaaatctat cgggcaactg aatttacgga
     2641 ttgagcaagg gctaaacatc attgcaattc aacgcactaa gcggtttaga aaaattaccg
     2701 tcagtgcctc ggtaaacgaa attttccagc cgaaagatat tttactgctt gatactgccc
     2761 tcgatgatga aacttaccaa caacgctgtg aacagctcaa acttcgcccg attgagctaa
     2821 aaggcgaata cttttcctca caatatcgct cggtgggtat ggcggaaatt tcggttatgc
     2881 ctgaagcaga atgtatcggt aaaactattc gggaactcaa attccgctca agataccatt
     2941 taagcattgt cggcttaaaa cgtggtgatg aaatcataca agaggaactg ctcgatacgc
     3001 cactcaaatt cggcgatatt ttattggtga tgggcgtatg gcaacaaatt caccgtatgg
     3061 acgacgatca tcgagatttc ttcttgctta gagatccggc agaaagtaaa aacgcccctc
     3121 cggcgttaag ccaagcccct cacgctctgt tctcagtgct gactatggtg ttgctgatga
     3181 ttaccggcat tgtgccaaac gtgatggcag cgttgattgc ctgcttaatg ttaggcaagt
     3241 tccgctgtgt ggatatgaaa agtgcttatg attcgattca tatgccaagc attgtgttga
     3301 ttgtggggat gatgccgttt tctattgcct tacaaaaaac cggtggtgtg gatttaaccg
     3361 ttaggcttct acttgatgca atgcaaggct tagatgtaca ttttgttcta atagtattat
     3421 ttgtagtaac agcgattatc agtgctttta tttccaacac agcgactgca attttggtta
     3481 tgccgatagc cattgcgatt gctaaccaac ttggctactc accggcacct tttgtgatga
     3541 cggtcgctgt ttcagcctcc gccgctttta tgacgccggt ttcttcaccg gtaaatacga
     3601 tggtattagc accggcaggc tataaattta ttgatttcgt taaagttggt gtgccgttta
     3661 ctgtactggt gatgctggtg tcggtgtttg tgattccgat gttatttccg ctctaaacac
     3721 tcctctaaat tacaagcggt catttttggt aatctgacgt tgacggtaaa attgttgagt
     3781 atgtctggca acatagtgtg gggtactgat cttttttgca tagagagaaa gaaaaaaatt
     3841 tgggcggaaa aataacggcg aggctaggaa atacaaggct tcgccgtttt tgtttggggt
     3901 gagttatgca aaaaacgaaa atgagcaaaa atagaaaaaa atgggctatt tttacgttat
     3961 tttttgcata ggtctgagca ggtttaaacg gattttaaaa caattttaag cgccctcatc
     4021 tcggctggct cggttgcgtt gctctaagct gtgaatgagg tcgtgtacac gttgtttatc
     4081 ggcacaggtt aggttggtgt tattatccac cgtgcagccg gcaatcaccg tggcgttatc
     4141 gccgttttga atgatgacgt tgctgttatt aaacacctgt ataggctctt ggcttggctg
     4201 gctgttgccg gcagtgctat tgtctctgaa taatttgaga atggcttgtt tgtccatatt
     4261 gtcccctgtt atgccaccag tttgagtaat cccaccattt tttctttttc gcttttttct
     4321 tgcgtgagaa gctcgtagaa agcccacacc atttgggctt ttccggcagg cttcatttcc
     4381 cgttgggtaa tttccagcac ctcttccaac gtttctattg cctcttgtaa cttagctttg
     4441 ataacaacta cttccccttc ttctgtctgc ggttttgtgg catacacagg ctgtggctct
     4501 cttgtgacat taaggctttg cgagtgtcgc tcacctgtta ataggtagca aggctcaacg
     4561 ttaagtattt gtgacaaagc cataagtttt gatataggag gttctcttgt atcagcctcc
     4621 cacgcttgta atgtagatat tgcaatacct cctagggcat cacaaacctc agatctactt
     4681 aattttgcat tttttctgct ctgttctatt cggttaccga aaccaataac ctttttacac
     4741 tctattttca taactgtaaa aaaataagtt gagattttta gccttttaca ctctaaaaac
     4801 ctataaataa atcaataact tacagcaaac taagtttatt tgctcataaa tcaactataa
     4861 agcaaccttt ttacacttta tttttagtaa aaataggtat attatctaaa tcgttaagcg
     4921 aaaggagtta tctaatgagt acattggaag atattaaaaa aacagcgaaa gactggcata
     4981 gggccgacat catcgctgct ttacataaag cgggttggtc gcttagacaa ctctcattga
     5041 agcatggcta cagtcaatcc agcaccttga aaaacgctgt agatcgtccg tggttaaagg
     5101 gtgagcgtat tattgccgaa gcaatcggta tatcacccga agaaatttgg cctgaacgtt
     5161 atgctcaacg aaaccataaa aaatttgccg acagatagct taaagaggtt tttatgagtg
     5221 aaaacagtct aaaaacacac tattcggcaa aagaattggc tgagttaagt ttagcctgtt
     5281 tacctaaaac aaagcaagga gttttgtatc aggcaaagaa acaaggatgg actactcata
     5341 aaaaggttgg agttggggga gaaattttag aatttgcact ctcaaacctc cctcaagaaa
     5401 tccaaaccga aatccgctcc cgctttatgt cggcggtggt ggaagccaag ccgaaaaagt
     5461 taccggcagt gcgtgcggag gtggatgtgg gaaacctgac caccaaacag cgagaaattg
     5521 ctgatgcacg aatggcactg gtggcgtatg tgttggaact ggaaggctca atgagccgga
     5581 ttaaagcgat aacctacctt tgcaaccttg ccaaacaagg cgaaatgcca ccgcacttgg
     5641 tggagctggt tgccgtagca aatgctaaaa agacggcaaa acgcacaata gttcccattt
     5701 ttagcccgat tatgccggat ttcccgttgg atagtcgaga ttgaccgctt gttatccaat
     5761 taggcttttt tcttgctgat ggtatctacc caaactgcaa gcagtagaat tccaccttta
     5821 acgatatatt gccagaaggt tggcacatca agcatactca taccgttatc cagcaaagca
     5881 ataataaatg ctccaataac tacgccataa atgctaccga taccgccggc taaactggct
     5941 ccaccaatca cgcaggcggc aatcgcatct aattcggcat tttgcccggc ggaaggtgcg
     6001 ccggctccaa gacgtgagct taaaatcaag cctgcaatgg caactaataa gccgtttaag
     6061 gcaaaaatcg caagtttgac tttttcaact gaaatccccg agaggcgagc ggcatcaatg
     6121 ttgccaccaa tcgcataaat gtgacgcccg aaggcggttt ttctggccaa gaatgtgccg
     6181 gcaatggcta gaatcaccaa caccaatacc gggaatggca caccacggta atcattgagt
     6241 aggtagatcg cacctaatac gataattgca actagtccgt atttcagcgt gtctttcgac
     6301 atagaaggca cagtaagatt gagtttttgt ctggctttgc gttggtagct accccaaaca
     6361 ataaagcaaa atatcccgat agtacctaaa atcataccca ccatatcagg caaatagcct
     6421 tgaccaatgg ttgtcatttc attgctaatc ggtgaaacgg ttgtcccgtt ggttaagccg
     6481 accaatacac cacgaaacgc cagcataccg gcaagagtta caataaagga cggcactttt
     6541 tgataagcaa cccaccaacc gctccaagca cccagcatga cgcctaaaat taaagtaact
     6601 ataatagtta acgagagcgg ccagccccac catacattac tgatggcggc aaatccaccg
     6661 agtaagccca ttagcgagcc aaccgataaa tcaatttctg cggaaataat cacaaatacc
     6721 ataccgatgg caagaatacc ggtaatggag gtttggcgta acaggttgga gatatttctg
     6781 gcacttaaat aagcaccgtc agttgcaata gagaaaaagc tcataatcac aacaattgca
     6841 atcagcataa tataaacttg taaattaatc gattttaact tattcatagg ttactccttg
     6901 agtgccgctt ccattacttt ttcttgggta aggtcttggt taatcaaatc tgctttaatt
     6961 ttgccttggt gcataaccaa tacacgatca ctaatgccta aaacttcagg taattcggag
     7021 gaaatgacga taattgccat accttcttta gctaattggt tgatgagctt ataaatttca
     7081 tattttgctc ccacgtcgat accacgggtc ggctcatcta aaatcaggat tttagggtta
     7141 agcaataggc attttgccaa aattgctttt tgctgattac cgccacttaa ccgtccaatt
     7201 gctaattcag gcgaggaagt tttcactttc agttttgcaa tagattggtt gataatggtt
     7261 tcttccagcg gttcatttat tacttttttg ccaaaacaaa attgcggtaa tgaagagaga
     7321 gttatgtttt tacccacccc cataattgga atgatgccgt gttttttgcg atcttccggc
     7381 accatcacaa tatggttttc aatcgcttgt gcacaatttt tgattttaat cggttgctta
     7441 tgcagaaaaa tatcaccttg atatttgcct tggtaagagc caaaaataca ttgtgccatc
     7501 tcggttcgcc ctgaaccgac caaaccagca atacctaaaa tttcaccttg gcgtagtaca
     7561 aaattagcat tatcaacccg tttgatatgt gtattggttg ggtgccaagc ggttaaattt
     7621 tcaactcgaa ggacttcttc accaatattg tgtggctcgt gtgggtagag cgaggtaatc
     7681 tcacgtccaa ccatcatcgt aataatatcg tcttcactca ttccctctgc actgcgagta
     7741 ccgatatgtt cgccgtctcg aatgacacag attttgtcgg aaatggcttt cacttcattc
     7801 aatttgtgtg aaatataaac acaagcaata ttgtgagctt gtaaatcttt aattaaactc
     7861 agcagaatct cggtttcttt ttcggttaac gaggcggtag gctcgtctaa aatcaacaac
     7921 cgtacctgtt tattcaatgc tttggcaatt tcaaccaact gttgttgccc taaacctagc
     7981 tctccaactt tggtgtttgg gtcaatatcc aactgcactt gttcaagtaa ggttttacaa
     8041 cgcagataca tttcattgtc atctgtaatc cctgatttgg taatttcatt ccctaaaaac
     8101 atattctcca aaatcgacat attttttact aaggtcaatt cttggtgaat aatcgaaatg
     8161 cctttttctt cagtatcttt gatatttctg gcaatcaatt tttcgccgga aaaatagatt
     8221 tccccttcat aatcaccggc aggataaatt ccacataata ctttcatcag agttgatttg
     8281 cctgaaccat tttcaccaca taaagaaagt atttcgccgg tttcaaggga aattgaaata
     8341 ttatttaatg ccacaacctc accgaatttt ttagtgatgt tcttcatttc taataatttc
     8401 gccatactta gttagcccct tattttcaaa aatggcgagg aagcctcgcc atctagaaaa
     8461 attaaagtga tttatttata tactgcatct ttggtatgga agccgtcttt aattactgtg
     8521 tcatcaatat tttctttagt tacaacaacc ggctctaata aatatgccgg tacttctttc
     8581 ataccgttat ttaattgagc attcatttct actttctcat ctttacctaa tgcaacagca
     8641 atttcggcag ctttgtcggc taaattggta attggtttat acactgtcat cgtttgcgta
     8701 ccggcaataa tacgtttaat tgcggctaaa tctgcatctt gtccggaaat tgcaaccttg
     8761 ctggataacc cttgggcact taacgcttga attgcaccgc ctgcggttgc atcgtttgaa
     8821 gctacaactg catcaatatt atttttatta gcagttagtg cattttccat aatctgtaat
     8881 gctttttcag caagccaaga atctacccat tgatcgccta ccactttaat ttttccactg
     8941 tcaattaacg gttgtagcac cttcatttga cctttacgga acagcttcgc gttattatct
     9001 acaggtgaac cacccattag gaaataattc ccctccggct tttgcccaat aatgctttta
     9061 gcctgcaatt cacctacttt ttcattatca aatgaaacat aaaaatccac atcggcatta
     9121 ttgattaagc ggtcgtaagc aagtacctta acaccttctt tcttcgcctc ggcaatcaca
     9181 ttggataaca cttcgccgtt aaacggaata atcaccaata catcaatatc tttattcaac
     9241 atattctcaa tttgtgagat ttgtgcggtt gcatcgccat ttgccgattg aacgaagact
     9301 tttgctccta agctttccgc tttattcaca aaaatatctc ggtctttttg ccaacgctct
     9361 aagcgtaaat catcaattga cataccgatt tttagatctt tagcaacaga agcattgctg
     9421 agtaccatta aagtcgccgt agcaacggct aataatttag acttaagttt catagttcac
     9481 ctcattggtt atgaaaatgt gagcatcttt ttcgcccgta agcagtctgg gcttatttca
     9541 aatgaagttc aattatcata tttattaata tcattatgat ttttcacttt tgtgatctac
     9601 gccacattaa ccaataatcg aaatccaaaa acgaaatatc gtaattgaag gttttgcata
     9661 attttccgat gatgttaccg aaagattatt tttccaattc ataggagcat tattatgtct
     9721 aactatttcg acaaaatctc aaaagtacaa tatgaagggg ctaattccac caacccgttt
     9781 gcattcaaac attacaaccc ggatgaagtg gttttaggca aaacgatggc agaacatctg
     9841 cggttagcgg tttgctattg gcacaccttc tgctggacgg gtaacgatat gtttggcgtg
     9901 ggttcgcttg acagaagctg gcaaaaaacg ggggatttac tgcaaggtgc gaagcaaaaa
     9961 gcggaaattg cctttgaatt tttccaaaaa ttaggcattc cttactactg cttccacgat
    10021 gtggatgttg caccggaagg caacaatttc aaagaatatc agcacaattt caacactatt
    10081 gtggatattt tagagcaaaa acaagctgaa acaggcgtga aattattatg gggtacggcg
    10141 aactgcttta ccaatcctcg ctatatgtcg ggtgcttcaa ccaatccgaa tccggaagtc
    10201 tttgcttggg cggcagcaca agtctttacc gcaatgaacg caaccaaacg cttaggcggc
    10261 gaaaattatg tattatgggg cggacgtgaa ggttatgaaa ccctactcaa cactgactta
    10321 aaacgtgagc gtgaacaaat cggtcgcttt atgcagttag tggtggaaca taaacacaaa
    10381 atcggtttta acggcacttt attaattgag ccaaaaccac aagaaccaac caaacatcaa
    10441 tatgactacg atgttgccac cgtttacggt ttcttaaaac agtttggtct agaaaaagag
    10501 atcaaagtca acattgaagc aaaccacgcc actcttgcag ggcatacttt ccaacacgaa
    10561 attgcgactg ccaccgcatt agatattttt ggctcgattg atgccaaccg aggtgatccg
    10621 caattaggtt gggataccga ccaattccca aacagcgtgg aagaaaacac ccttgtgatg
    10681 tatgaaatct taaaagcagg tggtttcaca acgggcggtt tcaactttga tgcgaaaatc
    10741 cgccgccaaa gtaccgatcc gtatgattta ttccacgcac atatcggggc aattgatgtg
    10801 ttagcccttt cgctaaaacg tgcggcaaaa atgctggaag atcaagcatt acagaaagta
    10861 gtagataacc gctacgctgg ctggaaccaa gatttgggct tacaaattct aaacggtaaa
    10921 gcaagccttg aagatttggc aaaaatagtg gaaacccaag ggttagatcc aaaacctgtt
    10981 tccggtcagc aagaatattt ggaaaatttg gtaaatagct atatttaccg ttaatctaca
    11041 agcggttgtt ttttatcaat tttttgcaaa gttaagctcg atctgatccc cctctttgct
    11101 aaagaggggt gatagatctc caaaacttaa aattgcaaat gttccgaata aaatgaccgc
    11161 ttgtattcaa taacaaagga atatttatgt acattggaat cgatctcggc acatcgggtg
    11221 tgaaagtcgt gttactcgat gaaaatcaac acattattgc catcacacaa aaatcacttc
    11281 ctatttttcg tccacaccca ttgtggtctg aacaaaatcc gcaagattgg tggaatgcca
    11341 ccaatgaagc gatgttagaa ctttccgcta ctcaagattt acaagcagta aaagcgattg
    11401 gtttaaccgg gcaaatgcac ggagcgactt tactagataa cgcagataat gtactttccc
    11461 ctgcgatttt atggaatgac ggacgtagtt ttatggaatg cgaagagtta gaacagcttg
    11521 tgccaaatag ccgtgaaatt acaggcaacc tgatgatgcc gggctttacc gctccgaaat
    11581 tgcgttgggt tgataaacac cagcccgata ttgccgaaaa agtcagcaaa gtcttgctac
    11641 cgaaagatta tctccgcttg ttgatgagcg gcgaatatgc ctctgatatg tctgatgcct
    11701 ccggcacaat gtggcttgat gtgggtaaac ggaattggaa caaatcgcta ctaaatgctt
    11761 gcggattaga cattgaaaat atgccgaaac tgtttgaagg caatcaaatc acaggttatt
    11821 tacgtccaac ccttgccgag caatggaaaa tgaaatctgt gccgattgtg gcaggcggtg
    11881 gcgataatgc tgccggtgca atcggcattg gcttatacca aaccgggcaa gctatgctct
    11941 cattggggac ttcaggggtt tattttgtag tgagcgataa atttcaggct aatccgcaaa
    12001 aagcagtgca tagtttttgc cacgctttac ctgatcgttg gcatctgatg tcagtaatat
    12061 taagtgccgc ttctgcggta gattgggcag taaaatcatt gggactaaaa gatgtatcga
    12121 ctttattcca acaggttgaa gcaagccaaa cggcatctga tgctattttc ttaccttatt
    12181 tatcgggtga acgtacaccg cataatgacc cttatgcgaa aggcgtattt tggggattaa
    12241 gccataatga caaccaaata acgatggcaa aagccgtgat tgaaggggta agtttcgctt
    12301 tggctgaagg gattgaggta ctccacgaaa ctggtgtagt tgctgacaat attgcattaa
    12361 ttggcggtgg agcaaaaagt gtgtactggc gacaactact tgccgatatt agcggtaaaa
    12421 cctttgaata ccgcaccagt ggtgatgtcg gtccggcatt aggggcggca aaactcgctc
    12481 aaattgcgct aaacccaaat caggatattg ctacgttctg tcagccgtta cccctggaac
    12541 aggtttacca accaacccct gcccgctatg cagaatatca acaaaaacgc caaaaattta
    12601 ctgagcttta ccggcggtta aaggggttat aattcttgcc aactattaca agcggttgat
    12661 tttgcagatt tttttgtaaa atcaaccgct tgtatcacac tttagaaaac aaattaatca
    12721 ccaatacacc ggcaataatg aggctgatgc cgattaagcc tgccaagtca attttctgtc
    12781 cgaaagcaaa ataagcaaca agggcggtaa ggacaatccc tacgccggac caaatagcat
    12841 acacgattcc gaccggtagg gtgcggaaaa taatagagag aaagtaaaag gataaaccgt
    12901 ataaggcgag cgagccaata gtcggtatag ctttggtgaa gccgttgctt aatttgagta
    12961 aattggtggc agcgatttcg aggcagatgg aaatcgcaag taaaatccaa acgttcattg
    13021 atgacctctt tgcgtaaatg cgtgctattt tacctgagtt gcaaaaaaat ttaaaaaaat
    13081 caccgcttgt tttttcctga ttaagctatg gtacaatctt tggtgaatca ggaggtgtga
    13141 aatggcacag gtttatatcg tacacggtta tacggcgaat gccgataagc attggtttcc
    13201 ttggctggag caagaattag cgaagtgtgg tgtcagttgt gagcggttga atatgccgga
    13261 ttcggcaaag ccgtcattag atggttggtt aaatcatctt gcacaaaatg tggagctgac
    13321 cgatcaaacg gtttttgtcg ggcatagttt aggttgcatt gccattttga attttttagc
    13381 caaaaattac gccaagatta aaggggcggt gtttgtgtcg gggttctatc aaccggtaga
    13441 aaacttaccc gaactgtctg cctttaccaa ctattatgcg attttgccga gcgtatcgag
    13501 ctttccaagc tatgtggtaa gtgcgttaga tgataaggtc gtgaatcacc aatacagtga
    13561 tgcgttagcc caacatttgc acgcggatta tattcggtta aatcaaggcg ggcatttttt
    13621 ggatagagaa ggtgttaccg aattacctgt ggtgttggag ttggtgaaga agttactcga
    13681 gtgaaacctg ttttggtaca agcgaggacg cttgcaccat ctataagttg aatttaaaca
    13741 aaagttatac atcagtctga tagtgccagc gtccacgctg gtacttttgt ataaaccaac
    13801 cctattttgc aaaaaaacgg taaaaataaa ccgcttgcct ccctatggga aaacttacag
    13861 tttaataaat ccatcataaa tgtgggtggc atcgccggtc atatacagag gatgccctac
    13921 tccttgccat tcaataatca gcgttccacc gggtaaatcc acctgcactt tgttatctaa
    13981 caagccttgc ataatgccga ccgccactgt gccgcacgca ccgctaccac aggcttgggt
    14041 ttcgcctgct ccacgctcat acacccgtaa tttaacgtga ttgcgattca ctacttgcat
    14101 aaagctgata ttcgcccgtt caggaaaacg ctcgtggctt tctagtaacg gcccgagttc
    14161 atttaccggg gcggttttca catcatcaac ttgcagtacg cagtgcggat tccccattga
    14221 aaccacgcca cataacacgg tttgtagctc ggtgcgtaaa atatagtttt tctcaaattt
    14281 atttgctgta aaaggcactt gcgaaggttc ccaaatcggt tcgcccatat tcacacgcac
    14341 tttgccgtct tcttgcaaac ttagcaccat tttgcctttt gcggtgctaa cgtgaatgtc
    14401 ttttttgttg gttaagcctt tgagcgtaac aaaacgggca aaacatctcg ccccattgcc
    14461 acattgcgac acttcactgc cgtctgcatt aaaaatgcga tagtgaaaat ctaattcagg
    14521 gtcgtaaggc ggttcaacca ataaaagttg gtcgaaaccg ataccacgat ggcgatcaga
    14581 aagcgtacgg atcatctctt cggtaaggta aacgttttgg gttacaccat caaccaccat
    14641 aaaatcattg cctaagccgt gcatttttga aaattgcata ttattcctta attaattaga
    14701 aattttattg atttagatta tagagattag ttttatttat tgatatagta cgtgccgatt
    14761 aatttgatga aaaatgcaga ttttttcaaa cacagagttt catttactta tttaggagca
    14821 aaaaattatg tctgcgatgt ttattatcca atttgccata gtgttactat gcattttggt
    14881 tggcgcccgt gtaggcggta tcggattagg ggtgttcggt ggcttgggct tagccattct
    14941 ttcatttggg tttgggctaa aacctgccgg tttaccgatt gatgtaatgt ttatgattat
    15001 ggcggttgtg tcggctgcag cagccatgca agcagccggt ggtttggact atatgatcaa
    15061 aattgccact cgcattttgc gtaaaaaccc gaaatacatt acctttatcg caccgcttgt
    15121 aacttggaca ttcaccgtgc ttgccggtac aggtcacgtt gcttattctg tattacctgt
    15181 aattgcagag gtaagccgcc acaacggtat ccgccctgag cgtccacttt caatggcagt
    15241 aatcgcctca caatttgcga ttgtcgccag cccgattgct gcggcagtag ttgctgtggt
    15301 tgccttcctt gaacctcaag gtgttacatt gggtaacgtg ttaagtgtga ctattcctgc
    15361 gaccttattg ggcttaggtt tagcttgtgt gtttgtaaat aaaatgggca aagaattaaa
    15421 agacgaccca aattatcaac gcttattgca agaccctgaa tatgtgaaag aaaatcacat
    15481 tactaccaat ccaaccgaat taccgttaaa accgactgcg aaattatcag taggcttatt
    15541 cctattcggt gcattattag tggtattaat gggcgcaatt ccagctcttc gccctgtgtt
    15601 tgatggtaag ccgatgggga tggctcacac gattgaaatt gtgatgttaa gtattggtgc
    15661 gttgattatc ttcttctgca aaccggacgg taatgaaatc accaaaggtt ctgtcttcca
    15721 cgccggtatg cgtgcagtga ttgcgatttt cggtattgct tggttaggcg ataccttaat
    15781 gcaaggtcat atggacgaag tgaaatcaat ggtttcaggc ttagttgaaa ccgcaccttg
    15841 ggcatttgct ttcgcattat tcgtactttc cgtattggta aacagccaag gggcaacggt
    15901 tgcaacctta ttccctgtag cgattgctat cggcattcct gcaccggtgc taatcggggt
    15961 atttgtggcg gtaaacggct acttcttcat tccgaactac ggcccgatta ttgcctcgat
    16021 tgacttcgac accaccggca caacccgtat cggtaaatat attttcaacc atagctttat
    16081 gttaccgggc ttacttagta tgattttcag tatcggattt ggtttattac tttccaatat
    16141 cctactttaa tcgctcgcaa aacctcccgt ttgggaggtt ttttatttgc aaaattttca
    16201 gcaaaaacga ccgcttgtaa cggctcttgc aagcattaca cctatcaaag taagcaaaag
    16261 cccaccgatt aaatgtaaac tcagcactgt cacaaactgc ccccattttt ctgctaatag
    16321 tttttccgtt agttctaaag agaaactgga aaaggtggta aaactgccta aaaaaccgct
    16381 gatgaacagc aaccgctggc tctcgcctaa attaaacccc attgcaatac caattaacaa
    16441 acaaccaagc caatttgctg ctaaagtacc aaaggcgaat tggctgagta tcgggtttag
    16501 ccaaacggct aattgccagc ggcacatagc tccaagtacc gccccgattg aaatcataag
    16561 tattgaagac atcatttttc ctcatctaac gttttctcac atcataccta aaaatgagtg
    16621 atttagaaaa ataatgtgat ggatttcaca aatttgaaac ttcctatttg cttaaaaaat
    16681 gccgctttgg caatatcact ccgaaatatg ttcatattca aacatttttt catcactttc
    16741 caatcatttt catcttaagg agaaacttta tgagcaaatc cttacgtaat gcctgtattg
    16801 gcgaatttat cggtacaggt tttattcttt tctttggtgc tggttgtgtt gctgctgctc
    16861 aggtagccgg tgcgaatttc ggtttatggg aaatttccat cgtttggggg cttggtgttt
    16921 ccatggcaat ctacatttct gccggtattt ccggtgctca ccttaaccct gcggtcacta
    16981 tagcacttgc cgcattctac ggctttgaaa agcataaaat tttgccctat gtcatcgccc
    17041 aagttgccgg agcgttttgc tctgtcgcac tgatttattt tatgtatagc gatctcttta
    17101 ctgccgccga agccgctcaa ggcattactc ggggcgaaac tgttggcttt gccggtgtgt
    17161 tctccaccta tccaaaccct aatattacat tggttaccgc cttcatcgtt gaatttgtga
    17221 ttactgtggt gttgatgtcc actattttag cgattggcga tgataaaaac ggcttgccga
    17281 ataaagcctt agccgcatta ctcatcggtt tattgattgc ggtaattggt ggagcaaccg
    17341 gcccgttaac cggctttgcg atgaacccgg ctcgtgattt tggtccgaaa ctctttgctt
    17401 atcttgccgg ttggggtgaa attgctttaa caggcggaaa agaaattccg tatttcatca
    17461 ttccgattgt cgccccaatc tgcggtgcat tattcggtgc ttggggttat aaaaacctca
    17521 ttcataacaa tcttccagca aatactcagg agtaatctat ggaaaaacaa tatatcatcg
    17581 ctctcgacca aggtacaacc agctctcgtg cggttttatt agataaaaat gccaatgtgg
    17641 ttgaagtggc tcagcgtgaa tttacccaga tttatccgca agcaggctgg gtagaacata
    17701 acccgatgga aatttggtca agccaaagtt ccaccttaaa tgaagtggtg gcaaaagccg
    17761 gtattaagcc ggatagcatt gccgcaatcg ggatcacaaa ccaacgtgaa accacgattg
    17821 tgtgggaaaa agagaccggt aaacctgttt ataatgcgat tgtgtggcaa tgtcgtcgca
    17881 catcggatat taccgataaa ttaaaagcag acggacacga ggaatatatt cgtaaaacga
    17941 caggcttggt agtcgatccg tacttctccg gcactaaagt gaagtggatt ttagataacg
    18001 tagaaggggc aagagaaaaa gcagaacgtg gcgaattgct gttcggtacg gtcgatactt
    18061 ggctggtgtg gaaattaacc caagggcggg tacacgttac cgattacacc aacgcttctc
    18121 gtactatgtt gtttaacatt cacaccaaac aatgggacga taaaatgctg gaattgctca
    18181 atattccacg ctcaatgtta cctgaagtga aaaattcatc agaagtttac gggcaaacta
    18241 atatcggcgg tcaaggcggt gtgcgtattc cggtcgcggg tattgcaggt gaccaacaag
    18301 ccgctctcta cggtcattta tgcgtgaaag aaggacaagc gaagaatacc tatggtacag
    18361 gctgttttat gttgatgcac accggtaaca ctgcgattca atctgaaaac ggtttattaa
    18421 cgaccattgc gtgtaacgca aaaggcgagc cggaatatgc gttggaaggt tcagtattta
    18481 ttgccggtgc gtctattcaa tggctgcgtg atgagctgaa aattgttcac gatagctttg
    18541 acagcgaata ttttgccact aaagaagatg actctaacgg tgtttatgtt gtacctgcct
    18601 ttaccggctt aggtgctcca tattgggatc cgtatgcacg aggctcaatt ttcggtttaa
    18661 cccgtggggc aaaccgtaac cacattgtgc gtgcgaccct agagtctatc gcttaccaaa
    18721 cccgagatgt gttagaagca atgcagtctg actccaaagc gaaactacaa gcgttacgtg
    18781 tggacggtgg tgcaaccgca aacaacttct taatgcagtt ccaagccgat attttagaca
    18841 ccaaagttga gcgtccgaaa gtgaaagaag tcactgcttt aggggcagct tatcttgcgg
    18901 gtattgctgt cggcttctgg aaagatttgg aagaactgaa agacaaagcg gaaattgaac
    18961 gcaccttcac accggacggc gaccaagaaa aacgggcgaa acgctataaa ggttggaaaa
    19021 aagccgttcg ccgctcatta gaatgggcaa aagaagacgc agaagagtaa aaacgcaacc
    19081 tgtgcataaa caaagggagt ataggcaact atactccctt taagatcttt tagttatatt
    19141 aaatagtgat tttgatttgt tctaaattag ccttttcttt atgatgagcc acaccaataa
    19201 acaacctgat aaggaacatt tatgtctcaa tttcaaattc acactattga atccgctcct
    19261 gaaacggcac aagaagccct aaaagcagtg caacaagcaa acggttttat cccaaatctg
    19321 atcggcgtat tagccaacgc accaacagca ctggaaactt accgcactgt gggtggtatt
    19381 aatagtcgta acagcttaac cgctgaagaa cgtgaagtgg tacaaatcac cgcagcagtg
    19441 gtcaacggct gtggtttctg cgtggcaggt catactaaaa tcgccttaaa agcattaaaa
    19501 atgcctgaag aagtggtaaa tgctttacgt gccacggctc gcatagacga taacaaatta
    19561 gacactctgg ctcgcttcac ccttgcagta atgttacaaa aagccaaatt aaccgaagcc
    19621 caattaaacg aattttttgc cgcaggttac aaccaacaaa atgcgattga tgtgatttta
    19681 ggcgtgagct tggcaacatt atgtaactac gttaacaaca ttgccgaaat tccaattaac
    19741 cctgaattgc agccttttgc ataatagata gccgtaaaat tgaggaagca taaaaaatgc
    19801 atcctttttt atttttattg caagcggtta tatttagact attttttgca aaataaaaga
    19861 ggcaacaatt tgtctcttat ccgcttaact attcgccagc accattctca gctgtaccgc
    19921 acttggcgta acaacgggca gaaatgccgc ttctttccaa cggcggctga agcctgaagt
    19981 atcatttttc agatagccac gtccgccact cgcttgcagt tctagcagaa tagtttgggc
    20041 gacgacattg acaatgtcaa ttctcgcttg gaaaagctct ttcggattac gcacaaaata
    20101 accttcttca tttaagccat taaacagacg agttttaata tcgttgaggg catcaacttg
    20161 agcttgccac tcagaggcga gaattgcacg gaaagggagc gatttttcga tttccgccaa
    20221 actacgttca accaagccaa agggcaaacc aaattgtaaa cctaagaacg cagggcgagt
    20281 ggctgctaaa aactcaggcg cgtcatcagc caaaatccat tcatcttgta attccacatt
    20341 ctcaaatacg agagaggtag tattcgtgcc ttgcaatgcg ataaattcca attctttggt
    20401 gcgggttaag cctttggcgg tggagggaat tgcaatcact agcggtttgc gttcgtcttg
    20461 aaaaccggca acgaaactag caacaaagcg gtatgaacgt aaattggtta cccaaggcag
    20521 gcggccattt aaatagcgtt taccgttttc ttcacgaata ttcacattca actcttcaat
    20581 gccggagaga aatttcatcg cattggataa acctgttcct gcggttaaat tgccatttag
    20641 cagatccgcc aaatagcttt ggcggggaat aggatttttt gaggcgataa tatgctcgat
    20701 aaaggtacga tgtccccacg aaacaaatgc cgcagccagc gagtgattac ccagttcggt
    20761 aacggctttg atcgcatcaa ccaaagtgcc accgctgccg ccaagcgttt ccggcacgcc
    20821 gattttatat agccctagtg cggcaatttg tggaatgagt aaatccgctc gttcgttaga
    20881 ttgatctaaa ttttcggcgt tctgctgaag ccattgaata aaagaagatg aaagaaccga
    20941 cattgtgttt acctcgtata attagtttac tttgtcgcta tcttaaatcg cttttttatg
    21001 ccctagaaat aaaataaatt aaggtaatat gctttttggg aataaacaag cggtcgattt
    21061 tttgcaaaaa aatgcaattt ttcgaccgct tgtcaattta tctgccgcct ttcgctaaag
    21121 ccaagcggat taagctatcc aacgcccagc cgattaagcc gataattata attaccgcca
    21181 tcagttcgga ataggctaat cggtctcggg tgtctaaaat aaaatagccg agtccttgat
    21241 tcacgcctag catttcgcac ggtaccagca ccacccacgc aatcccaacc gccacacgta
    21301 aaccggtgag aacgtgtccg gtaatagccg gtacaacaat tttgcacagc agttctttgc
    21361 gggtagccga cattactcta cccagttgta accattgtgg atcaatgctt tttacccctg
    21421 aggtggtgga aataatcaac gaccaaacgg tggcaaacgc cagtaaaaaa taaatcggca
    21481 aatcgcctac accaagtaac atcacgataa tcggcatcca cgaaagtggc gaaatcatac
    21541 gtagtagttg gaatgacggc gtgcaaagca tttcaaggtg cttggagaag ccgagcaata
    21601 agcccagcgg tacaccaatc actaacgcag cgagtagccc gacagcaatg cgttgcaaac
    21661 tcgcccataa gtgcggaaaa atttcgccgg aggaaatcag ccaagtaaaa ctttcccagg
    21721 tttttgccgg agctaacatt gacgccatcg gcaaccgttg gcttaacaag gctgtgccaa
    21781 gctgccaacc taaaagtagc agtaataaac cggctaagcc gtaaatatat ttctgtttca
    21841 tcgttcgttc ctatcgctta tacactaatt tgctcggttc ttgtccaacc ggtttgtaaa
    21901 ttaaaggttt caacccaacc gccttgctca atcgcttttc gcacaaaggt cggctcgtta
    21961 atcgctttcg ctgcctctac cgggtcaagc tgttgtaaaa acgcattatt gccggcaatg
    22021 tgggtctgtt tgagcatttt gaccagctct tccatatagg aatcgaacgg atacggttgg
    22081 aaaccgattc gctgttggtg ccactgaggg ttttgaattg cccctgtttc gatatattta
    22141 tcccactgag cttgggttgg agccagtacc ttttccagca ctttttgatc gtgcggcgtg
    22201 tagccgctgc cccgagccaa taattgagcg gtttctgcac ggttggcaag cgtggacact
    22261 tgggcttcgg ttaagacatt caccactttt tgcacccatt ccgggcggtg ttgaatatcg
    22321 tattcgtgca ttagggttaa acagcaggcg tgatctttcc acacatcgcc actaaaacgc
    22381 agcaccttcc ccacaccttt ggcttccgct aacgcattga acggctctgc cacaataaag
    22441 ccggaaattg cctcacttgc caacgctgcc accatatctg acggagccat tacacttaat
    22501 cgcacttcac cgcttttcgg ctctttttcg gtgattttca agccattttc tcgtaataat
    22561 cgttgcaaaa cgatattatg aattgaatac caaaacggaa ttgctaccgt tttgccggag
    22621 agttcggcaa tactgttgat ttcagggcga accgttaaag ccgaacctgc caagtgattc
    22681 cacattaccg ctttcaccgg agcatttgct ccatatttcg cccacaaact cataggcgaa
    22741 agcagatgca ccacgttcac attgccactt aaaaaggctt ccaccaactg agcccagctg
    22801 cgaaacatca ccggtttttc cacctgcaca ccgtgctttt caaataagcc tttgctgatt
    22861 tttgcggtag ccaagagaaa gattcgtaat gcttaggctc ataaatcccc ttttctagtt
    22921 caatgttaat gaaatg
//
LOCUS       DANLZQ010000024        22712 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.024, whole genome shotgun sequence.
ACCESSION   DANLZQ010000024 DANLZQ010000000
VERSION     DANLZQ010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 22712)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22712)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22712
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.024"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(184..1587)
                     /locus_tag="PXE50_000911"
     CDS             complement(184..1587)
                     /locus_tag="PXE50_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HDL5621841.1"
                     /translation="MLTYTFNTQEGTALYEQLYRFLKNDIESNILIAGDKLPSKRAFA
                     KHLGISVMTVETAYQQLVAEGYVNTQPKKGFFVNALNLPEKKEAISVQLQKISSEQYE
                     KNKKWQADLTNRQTLAENFPFSVWTKLVREVLKTHQSELMERAESGGVWTLKFAIANH
                     LRAFRGMIVNPTQIIIGAGTEYLYGLLIQLLGLDKHYALTEPSYDKLRRIYHSYRLST
                     ATVSMPFSIDELNSKNVDVIHTSPSHHFPTGHVMPIAKRYELLAWVAQKAERYIVEDD
                     YDSEFRFVGQPIPALKSIDMLGRVIYMNTFSKTLSSTVRIAYMVLPPELLNRFQQELG
                     FYASTVSNFEQYILAEFIQQGYFEKHINRMRAYYQKKRDKLLKAFKQGNLAEKIAIKE
                     EHSGLHFIVQLNTTLTERQILQAAEEQGIKFVALSAYYQDKSQIQQNAFIIGYSNLKD
                     DQINYVAESLKKILDNE"
     gene            1798..2670
                     /gene="pdxS"
                     /locus_tag="PXE50_000912"
     CDS             1798..2670
                     /gene="pdxS"
                     /locus_tag="PXE50_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase lyase subunit
                     PdxS"
                     /protein_id="HDL5621842.1"
                     /translation="MTNRYDLNRQLAQMLKGGVIMDVTTPEQACIAEEAGACAVMALE
                     RIPADIRAAGGVSRMSDPKMIKSIQAAVSIPVMAKVRIGHVTEAQILQAIEIDYIDES
                     EVLSPADDTFHINKRKFEVPFVCGAKNLGEALRRINEGAAMIRSKGEPGTGNVVQAVH
                     HLRKMKQEIARLVSHTTDELYHVAKELQVPFDLVQYVHQYQKLPVVTFAAGGVATPAD
                     AALMMQLGAEGVFVGSGIFKSGDPAKRARAIVQAVTNYNDPKLLAELSEDLGEAMVGI
                     NEQEIELLMAARGV"
     gene            2670..3242
                     /gene="pdxT"
                     /locus_tag="PXE50_000913"
     CDS             2670..3242
                     /gene="pdxT"
                     /locus_tag="PXE50_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase glutaminase
                     subunit PdxT"
                     /protein_id="HDL5621843.1"
                     /translation="MKIAILALQGAFSEHTDKLQQLGVESMEIRQLADLNQDFDGLIL
                     PGGESTVQGKLLRELGLLEPLRQKILNGLPTLGTCAGLILLAENLVNDDKKHLATLPV
                     TVKRNAYGRQLGSFLVEEEVKYLGKIPLTFIRAPYIESTGKDVEILAKISGKIVGVKY
                     QNQIGISFHPEVNNDLSFHRYFVEMCRKNK"
     gene            3391..4341
                     /gene="tal"
                     /locus_tag="PXE50_000914"
     CDS             3391..4341
                     /gene="tal"
                     /locus_tag="PXE50_000914"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HDL5621844.1"
                     /translation="MSQLDTLSKMTVIVADTGDIEAIKLYKPKDATTNPSLILSASAL
                     PQYAPLIEEAINYAKAQSSDKDQQLVDAEDKLAVNIGLEILKLVPGRISTEVDARFSY
                     DTEKTIAKARKLIGLYNDAGISNDRILIKIASTWQGIKAAEQLEKEGINCNLTLLFSQ
                     AQARACAEAGVYLISPFVGRILDWYKAHEGKEYAPAEDPGVISVTNIYNYYKQHGYDT
                     IVMGASFRNVGEIIELAGCDRLTISPPLLKELQESDEKLVCKLDYKGEIKPRPEKMTE
                     AEFYWEHNQEPMAVEKLAEGIRKFAIDQEKLEAMLAEKLQ"
     gene            complement(4403..4676)
                     /locus_tag="PXE50_000915"
                     /pseudo
     CDS             complement(4403..4676)
                     /locus_tag="PXE50_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599987.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
     gene            complement(4707..5171)
                     /locus_tag="PXE50_000916"
     CDS             complement(4707..5171)
                     /locus_tag="PXE50_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HDL5621845.1"
                     /translation="MKKLALAVALMSSFALVGCANTDVFSGSVYSGEQAKEARSIAYG
                     TIVSVRDVKIQARSEGVIGTVGGGVLGGVAGNAIGGGTGQAIATAVGAVAGAVIGNQV
                     EQKASQVSSLEMVIRKDDGKEIVVVQKKEDGFVPGKRVRIVGSNSDLNVSLL"
     gene            complement(5192..5791)
                     /locus_tag="PXE50_000917"
     CDS             complement(5192..5791)
                     /locus_tag="PXE50_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDL5621846.1"
                     /translation="MDKIIAENAKFFEKMTACFGDLSQFEQKIRQIAEIAGIDLAAYE
                     IDHLAVRMNQTETAEQWKILLLDGATLLKESEVNGRPIGLFALIQAVEFCGQFVKIVE
                     LPFPKNKVYLEEGWEHIELVFPMLDNESSEQWVSRALSHFRLADNSEIKLKISQPQVE
                     GERLPNPSIAISLRNVTFCNPYCLKLHPYDIKSVIMSEN"
     gene            5825..7552
                     /gene="argS"
                     /locus_tag="PXE50_000918"
     CDS             5825..7552
                     /gene="argS"
                     /locus_tag="PXE50_000918"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011200504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HDL5621847.1"
                     /translation="MNIQQILSDKIKQAMVASGADSNVEPLVRQSGKPEFGDYQANGA
                     MGAAKKLGMNPREFAQKILENADLNGIADKLEIAGPGFINIFLNPEWLAENTNSSLQA
                     VNFGIKTANPQTIVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLAFLGNNVIRANHVG
                     DWGTQFGMLIAYLEKMENEHASEMELSDLEAFYRAAKEHYDSDEAFAEKARNYVVKLQ
                     SGDKYCLTMWKKLVDITMHHNQENYNRLNVTLTEKDVMGESLYNPMLPEIVADLKAKG
                     LAVEDDGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRAL
                     VFSDSRQAQHMQQAWLITRKAGYVPDSFSLEHPFFGMMLGKDGKPFKTRSGGTVKLKD
                     LLDEAVERADKLIAERSTELTAEEKAAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNML
                     TFEGNTAPYMQYAYTRIRSIFARANIDENALSGSIQLNEPKERALAVKLLQFEEALNG
                     VAKEGMPHILCQYLYELAGSFSSFYEACPILNAEETTKNSRLKLAALTAKTLKQGLDL
                     LGIKTVEKM"
     gene            7742..8908
                     /gene="cgtA"
                     /locus_tag="PXE50_000919"
     CDS             7742..8908
                     /gene="cgtA"
                     /locus_tag="PXE50_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Obg family GTPase CgtA"
                     /protein_id="HDL5621848.1"
                     /translation="MKFIDEALIRVEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGD
                     VYLIADENLNTLIDYRFEKRYAAGRGENGRSAGCTGHRGQDITLRVPVGTRAIDNDTQ
                     EIIGDLTRHGMKMLVAKGGYHGLGNTRFKSSVNRAPRQKTNGTPGEKRDLKLELLLLA
                     DVGMLGLPNAGKSTFIRSVSAAKPKVADYPFTTLVPSLGVARVGADRSFVVADIPGLI
                     EGAADGAGLGIRFLKHLERCRILIHLVDIMPIDESDPAHNISVIESELYQYSEKLAEK
                     PIWLVFNKIDTIGEEEAAERAKDIAEQIGWEGDYYLISAATGQNVQALTRDIMDFIEA
                     NPREVEEENKAPEEVKFKWEDYHNEAMQNAVEEDWDDDWSEEDDEGIEFIYERH"
     gene            8993..9610
                     /locus_tag="PXE50_000920"
     CDS             8993..9610
                     /locus_tag="PXE50_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate 1-dehydrogenase family
                     protein"
                     /protein_id="HDL5621849.1"
                     /translation="MLSSTSCDLFNIPFFQFAQMKKYCPEEIPRIKAEYKTQWEIWKK
                     LHQEVSRQLGQPFAPPHIEKWCNGWQVRAHFFAYYKYEFNRNSAAILSVILNRRRLQV
                     SLDWHCYRADRSQINVHQYNQWWENLDREKFADFEIWHGSESEYDDFRTVSQMSEQAF
                     TLTNEEDFWCIGKNVEKDDLDNIDVVEFIYQTIRALLPLYEKCHQ"
     gene            complement(9657..11615)
                     /locus_tag="PXE50_000921"
     CDS             complement(9657..11615)
                     /locus_tag="PXE50_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HDL5621850.1"
                     /translation="MIAELGNYTLALALAISILLAVLPLWGAEKQNSTLIALARPMTW
                     AMFLALTVSFGSLFYLFAVNDFTVQYVVNNSNSRLPLQYRLSAVWGAHEGSLLLWVWL
                     LSLWSVGVATFTRKMPEDAVARVLGLMGVIGIGFLMFVIFTSNPFDRTFPNFPIDGKE
                     LNPMLQDVGLIFHPPLLYMGYVGFSVAFAFAIASLMTGRLDTAWARWSRPWTMAAWVF
                     LTLGIVLGSWWAYYELGWGGWWFWDPVENASLMPWLAGTALIHSLAVTEKRGTFKAWT
                     VLLAILAFSLCLVGTFLVRSGILVSVHAFASDPTRGLYILAYLVLVVGGSLLLYAFKG
                     SEIKSLDNYERYSRETMLLINNILLMAFLSVVFLGTLLPLIHKQIGLGTISIGAPFFD
                     QMFLILMVPFSFVLGIGPLVKWRRDQVSAIRKPVIIATILMALLGFGLPYLFRNTITV
                     SVVLGTMMSVFIVLLSLYELHQRATHRHSFLSGIFKLSRSHWGMVLAHLGVAMTVFGI
                     AFSQNFSIERDVRMNVGDKAEILDYQFEFKGIKITDGANYQGGTAELEITRNGKYEAT
                     LNAEKRFYTVSRMGMTEAAIDWGFTRDLYAALGEKLEDNSWAVRLYYKPFIRWIWIGG
                     LFMALGGLLCMLDKRYRLRIENKKEVIA"
     gene            complement(11612..12169)
                     /gene="ccmE"
                     /locus_tag="PXE50_000922"
     CDS             complement(11612..12169)
                     /gene="ccmE"
                     /locus_tag="PXE50_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HDL5621851.1"
                     /translation="MNPRRKSRLKVVVSILLGLSVAAGLTLYALSQNIDLFYTPSEIV
                     NGKNDDPKQKPEVGQRIRVGGMVVEDTVKRDDKSLKVVFDLNDIGPSITVEYEGILPD
                     LFREGQGIVAQGVLIEPTRLKATEVLAKHDENYMPPELGDKLKEQHKKSGVSEQDLKG
                     ESETDRKMKAEAEAEKANNVQGESK"
     gene            complement(12355..12552)
                     /gene="ccmD"
                     /locus_tag="PXE50_000923"
     CDS             complement(12355..12552)
                     /gene="ccmD"
                     /locus_tag="PXE50_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmD"
                     /protein_id="HDL5621852.1"
                     /translation="MTFQFESISDFFAMGGYGFYVWLSYGVSFIAMIGLIWLSRREQK
                     AILAQAKKEIVREEKLKQTSQ"
     gene            complement(12567..13304)
                     /locus_tag="PXE50_000924"
     CDS             complement(12567..13304)
                     /locus_tag="PXE50_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease"
                     /protein_id="HDL5621853.1"
                     /translation="MWKWLHPYAKSETQYHLLGKIQPFLGWLSLIMLAAAFVWGLAFA
                     PKDYQQGDSYRIIFIHVPAAIWSMGVYGSMAVAGLVALVWQIRQANLAMISMAPIGLV
                     FAFISLATGAIWGKPMWGTWWVWDARLTSALVLFFLYIGVMALYSAFQDRQTGAKAAA
                     VLSVVGVINLPIIHFSVEWWNTLHQGATITKFDKPSMAVEMLIPLLLAIFGSLIFTAW
                     FSIWRYRIALLKDERNRPWVKQLAKSV"
     gene            complement(13504..14166)
                     /gene="ccmB"
                     /locus_tag="PXE50_000925"
     CDS             complement(13504..14166)
                     /gene="ccmB"
                     /locus_tag="PXE50_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005565617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HDL5621854.1"
                     /translation="MILLTIIQRELTIAFRKPSEILNPLWFFLMVITVFPILMGPNPE
                     LLGKIAGGIAWVAALLSALLSFERLFRDDYLDGSLEQLMLLPLALPQVALAKVIAHWL
                     LTGLPLILLSPIAAILLSLETHVWWALVLTLLLGTPILSCLGAIGVALTVGLRKGGTL
                     LSLLILPLFLPVLIFAAAVLEAATLNMGYSGQLAIIGAILAVTLTFSPFAIAGALRIS
                     LN"
     gene            complement(14163..14804)
                     /gene="ccmA"
                     /locus_tag="PXE50_000926"
     CDS             complement(14163..14804)
                     /gene="ccmA"
                     /locus_tag="PXE50_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis heme-transporting ATPase
                     CcmA"
                     /protein_id="HDL5621855.1"
                     /translation="MNQTAQYQLKLNQIACERGETRLFEGCSFTVQSGEWVQIEGHNG
                     IGKTSLLRILAGLFLPAEGEVLWNDIAIQKQRDHYYSELFYLGHYSGVKPELTPWENL
                     RFYQKIQQLPQDDDALWHALTKVSLIGREDLPCSHLSAGQQRRVALAKLWLTNAKLWI
                     LDEPFTAIDKKGVADLIAHIEQHCEQGRLVIFTSHQAAESDKVRIISLDQFKV"
     gene            complement(14948..15658)
                     /gene="hda"
                     /locus_tag="PXE50_000927"
     CDS             complement(14948..15658)
                     /gene="hda"
                     /locus_tag="PXE50_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA regulatory inactivator Hda"
                     /protein_id="HDL5621856.1"
                     /translation="MQLPLPIHQIDEDTFDNFYSQNSEVLLGSLKRNFTDVQQPFFYI
                     WGGKSCGKSHLLKAVSNHFLLNNQTSSYIPLTKANYFSPLVLDNAELLNVICLDDIQA
                     IAGDAEWELAIFNLFNQIREQQGLFNEGQKTLLLISADCPPHQLNIQLPDLRSRLTWG
                     EVYQLNDLTDEQKCQILQLNAHQKGVELSDEVAHFLLKKAGTDLEQLSKILDKLDKAS
                     LQAQRKLTIPFVKEILSL"
     gene            15928..17529
                     /locus_tag="PXE50_000928"
     CDS             15928..17529
                     /locus_tag="PXE50_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5621857.1"
                     /translation="MKNMTKLSLITLALAASSSVFAAPKTFVYCLEASPSALSPVLST
                     DGASFDVNALPIYNKLTDFEDGTTNVIPSLAEKWDISEDGKTYTFHLRKGVKFHDNKE
                     FKPSRELNADDVVFSINRQFDPNHPFHKVSGGNYEYFIGMDMQNIIDKVEKVDDHTVK
                     ISLKVPNAPFLANLAMDFNAVYSAEYAEQSLKAGKPERIDTNPIGSGPFQFVDYQKDA
                     TVRYKAFENYWQGTAKIDRLVFAITPDASVRLAKLQKGECHAMPYPNPADIEDLKKDP
                     NIELMSQSGMNIGYLALNSSIKPLDNQKVRQALNHAVNKQAIVDAVYQGAGQVAKNPI
                     PPTMWSYNEAVQDYDYNPEKAKALLKEAGFENGFDTELWAMPVSRPYNPNARRMAELI
                     QEDWKKVGVNAKIVSYEWGEYLKRLRQGEAATSMIGWTGDNGDPDNFLNTLLSCSAVE
                     AGSNYAKFCHKPFEEVVLGAAQESDKAKRTELYKQAQVIFKEQAPWITIAHSTVYFPV
                     RKEVKGYVMSPFSLHNFYKVDLADK"
     gene            17801..18805
                     /locus_tag="PXE50_000929"
     CDS             17801..18805
                     /locus_tag="PXE50_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005712947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDL5621858.1"
                     /translation="MFSFILKRVLMVIPTFIAITLITFALVHFIPGDPIEIRMGERGL
                     SPEVHQQMMEQLGLNRPLFEQYISYIKGVLHGDLGNSFRNNEPVLKEFFTLFPATVEL
                     AFFALLWSLIFGIILGVIAAVKKESWISHTVTTLSLTGYSMPIFWWGLILILYFSTPL
                     GLPASGRLPSEYWIEAETGFMLIDTWNSDEPGAFLAAIKSLILPSIVLGTIPLAVVTR
                     MTRSSMLEVLGEDYIRTAKAKGLNTTRIVIVHALRNALIPVVTVVGLIVGQLLSGAVL
                     TENIFSWPGIGKWIIDAINSRDYPVLQGSVLIIATIIILVNLTVDLLYGIVNPRIRHS
                     "
     gene            18907..19800
                     /locus_tag="PXE50_000930"
     CDS             18907..19800
                     /locus_tag="PXE50_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDL5621859.1"
                     /translation="MSGITAVNPPAPKTPLQEFWYYFCQNRGALIGLTFIAIVFVACV
                     FAPWVAPFDPIEQNRSALLLPPAWLEGGNSAHLLGTDDIGRDILSRIIYGSRLSVFIG
                     LVIVLLSCVFGVILGLLAGYYGGTLDIIIMRFVDIMLAIPSLLLTIGVVTILGPSLIN
                     AAIAIAIVSIPSYVRLTRASVLSEKNRDYVTASRVAGASVLRLMFVVILPNCLAPLIV
                     QMTMGISNAILELAALGFLGIGAQPPTPELGTMLAESRGFMQSANWLVTIPGLAILSL
                     VLAFNLMGDGLRDALDPKLKQ"
     gene            19811..20800
                     /gene="dppD"
                     /locus_tag="PXE50_000931"
     CDS             19811..20800
                     /gene="dppD"
                     /locus_tag="PXE50_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein"
                     /protein_id="HDL5621860.1"
                     /translation="MALLTVDQLSVHFGETKTPFKAVDRISYEVNEGEVLGIVGESGS
                     GKSVSSLAIMGLIDFPGRVMAEKLYFNGNDLLALKPKEKQQIVGADVSMIFQDAMTSL
                     NPSYTVGYQIMEALKVHQGGSKASRRERAIELLTMVGIPDPESRLEVYPHQLSGGMSQ
                     RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIDLLLELQRKENMALILITHDLALVA
                     ESAHRIIVMYAGQVVEEGKAEQIFKAPLHPYTQALLKALPEFAEGKSRLQSLPGVVPG
                     KYDRPQGCLLNPRCPYATEKCRTIEPAMQIINGRQVKCHTPLNAQGEPIRIAV"
     gene            20928..21917
                     /locus_tag="PXE50_000932"
     CDS             20928..21917
                     /locus_tag="PXE50_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5621861.1"
                     /translation="MKENNSLPPFLKAVDLKKYYPVKKGMFAKPKTVKALDGVSFTLE
                     RGKTLAIVGESGCGKSTLGRMLTMIESPTEGELFYNGQNFLVNDKETAQLRRKKIQIV
                     FQNPYSSLNPRKKVGSILEEPLLINTNLSAKERKEKVLEMMAKVGLKPEFYDRYPHMF
                     SGGQRQRIAIARGLMLQPDIVVADEPVSALDVSVRAQVLNLMMDLQEEMGLSYVFISH
                     DLSVVEHIADEVMVMYLGRCVEQGDTKTIFSNPRHPYTQALLSATPRLNPEQRRERIK
                     LTGELPSPLNPPKGCAFNARCRFATDRCYVERPELKTYQDGTRIACFVVEENN"
     gene            complement(22151..22708)
                     /locus_tag="PXE50_000933"
     CDS             complement(22151..22708)
                     /locus_tag="PXE50_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018356491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HDL5621862.1"
                     /translation="MSLDISSEQLADIRQQMLKFAQLQLQDIALAEDMVQEAFVNAIK
                     NIDNFQRKAALKTWIFAILKNKIIDYLRKKDRIVLESDLADDDEENHFFDNYGHWKEE
                     YYPSSWQEEAVYSKEFWILFEVCLSNLPAKQARVFMMREYLEATSDEICRVVNITSDN
                     LYTLIYRARLQLQQCLSRKLTERNR"
BASE COUNT         6875 a         4847 c         4666 g         6324 t
ORIGIN      
        1 cgacgcactg gaaatcaatt ttaaatcgtt cacaacagtg cgtcgttgtg tgccatgcat
       61 tatacgcaaa acaaaatgcc ttgcaaggag aatttggtaa ttttttgcaa aaatcactaa
      121 aataattacc acttgcgtgt ttttaaggca atttgctaaa aattaaagca gttttgatac
      181 ttgctattcg ttgtctaaaa tttttttcag gctctctgct acataattaa tctgatcatc
      241 ttttaaatta gagtacccaa ttataaaagc attttgctga atttgagatt tatcttgata
      301 ataagcagac aatgcgacaa attttatacc ttgttcttct gctgcctgca aaatttgcct
      361 ttctgttaat gttgtgttta gctgtacaat gaaatgcaag cctgaatgtt cttcttttat
      421 tgcaatcttt tctgctaaat tgccttgctt gaaagctttt agtaatttat ccctcttttt
      481 ttgataatac gctcgcattc gattgatatg cttttcaaaa tagccttgtt gaataaattc
      541 tgccaaaata tattgctcaa aattggaaac ggtagaagca taaaacccta attcctgctg
      601 aaaacgattc agtaattctg gtggcaaaac catataggca attcgtacag ttgaagagag
      661 cgttttagaa aaagtattca tatagataac tcgcccgagc atatcaatag atttcaatgc
      721 aggaattggt tgtcctacaa aacgaaattc gctgtcgtag tcgtcttcta caatatatct
      781 ttcagctttt tgtgcaaccc aagctaacaa ctcataacgt ttggcaatcg gcattacgtg
      841 tcctgtcgga aaatggtgtg atggcgaggt atgtatcacg tccacattct ttgaatttaa
      901 ctcatcgatt gaaaatggca tcgatactgt ggctgttgat aagcgataac tgtgataaat
      961 tctgcgcaat ttatcgtaac tgggctcagt tagtgcataa tgtttatcta agcctagaag
     1021 ctgaatgagc aaaccgtaaa gatactccgt acccgctcca ataataatct gtgttggatt
     1081 aacgatcatt cctctaaagg ctcgaagatg attggctatc gcaaatttta atgtccatac
     1141 gcccccactc tcagcacgct ccattagctc actttggtgt gttttcagca cttcgcgtac
     1201 taattttgtc caaaccgaaa acggaaaatt ttctgctaaa gtctgtcgat tagttaaatc
     1261 tgcctgccat tttttatttt tctcatactg ttctgaactg attttttgta gctgaactga
     1321 tatggcttcc tttttttctg gtaaatttaa agcattcaca aaaaagcctt ttttaggctg
     1381 agtattcaca taaccttctg ctactaactg ttggtaagct gtttccactg tcattactga
     1441 aatgcctaaa tgctttgcaa aagcccgttt agacggcagt ttatcccctg ctataagtat
     1501 gttgctttca atgtcgtttt ttagaaaacg gtaaagttgc tcatagagag cggtgccttc
     1561 ttgtgtgtta aaagtgtagg taagcataat ctgacatgat aagaaaaaca taaaatggtc
     1621 attttaaaca gttcagatta aattacaata catgctgttt cctcactcaa attggctgag
     1681 tgtatttaaa ttggtagatg aacactcgca tccagcgaat ataaaaataa acttaatgcc
     1741 gagctaatcg aaactacgaa aagttcaatt attcaacaat tagaaggaaa aagtacaatg
     1801 actaatcgct atgatttaaa cagacaactt gctcaaatgt taaaaggcgg tgtaattatg
     1861 gatgtaacta cccctgagca agcctgcatt gcggaagaag ctggagcttg tgcagtaatg
     1921 gcactagaga gaattcctgc agatattcgt gcagctggtg gcgtttctcg tatgagtgat
     1981 cccaagatga taaagagtat ccaagcagcg gtatccattc ctgtaatggc gaaagtacgt
     2041 attggacacg ttacagaagc acaaatcctg caagcgatcg aaattgacta tattgacgaa
     2101 agtgaggtgc tttctcctgc agatgatacc ttccacatta acaagcgtaa atttgaagtg
     2161 ccatttgtat gtggagcaaa aaatttaggc gaagccctac gtcgtattaa tgaaggcgct
     2221 gctatgatcc gtagtaaggg cgagccagga acaggcaatg tggtgcaagc agtacatcat
     2281 cttcgcaaaa tgaaacaaga aattgcccgc ttggtttcac ataccacaga tgaactttat
     2341 cacgtagcta aagagctcca agtaccattt gatttagtac aatatgtaca tcagtaccaa
     2401 aaattgcctg ttgtcacctt tgctgctgga ggtgttgcaa cccctgccga tgctgcattg
     2461 atgatgcagt taggtgcaga aggagtcttc gttggctcag gtattttcaa gtcaggcgat
     2521 cctgctaaac gagcgcgggc cattgtacaa gctgttacca actacaacga tcctaaatta
     2581 cttgcggagc tttctgaaga tttaggtgaa gcaatggtag gaattaatga gcaagagatt
     2641 gaattgctaa tggcagcaag aggtgtctaa tgaaaattgc tattcttgct ctgcaaggtg
     2701 catttagcga gcatactgat aaactccagc aactaggggt tgaaagtatg gaaattcgtc
     2761 aacttgctga tttaaaccaa gattttgatg gtctgatttt acctggtggc gaatcgactg
     2821 ttcaaggtaa attattacgt gaattaggct tgcttgagcc gcttcgtcaa aaaattttaa
     2881 atggcttgcc aacgcttgga acttgtgcgg gtttaatttt gcttgcggaa aatttggtaa
     2941 acgacgataa aaaacatttg gctactttgc ctgtaacagt gaaacgtaat gcttacggaa
     3001 ggcaattagg ctcgttttta gtagaagaag aagttaaata tctcggtaaa attcctctca
     3061 cattcattcg tgcgccttat atagaaagca ctggaaaaga tgtagaaatt ttagccaaga
     3121 taagcggtaa gattgttgga gtaaaatacc aaaatcagat aggtatatcc ttccatcccg
     3181 aagtgaataa tgatttaagt tttcaccgct attttgtgga aatgtgccga aaaaataagt
     3241 aaaagaaaag gggctattgc ctcttatttt ttatactttt ttagaaaaag tagttttgaa
     3301 taaaaaaata ctaaaactct atttccctta tgttattatt atagtaactt ttactactat
     3361 ttatttcaca atcaaaaaag gaatcagact atgagccaac ttgacacctt aagcaaaatg
     3421 accgttatcg ttgctgacac tggtgatatt gaagcaatca aactttataa gccaaaagat
     3481 gcaacaacaa acccgtcttt aattttaagt gcatcggcat taccgcaata tgctccatta
     3541 attgaagaag cgattaatta cgcaaaagca caaagtagcg ataaagatca acagttagtt
     3601 gatgctgaag ataaattagc ggtaaatatt ggtttagaaa tcttaaaact tgtacctgga
     3661 cgtatttcta cagaagttga tgctcgtttt tcttatgata ctgaaaaaac tatcgctaaa
     3721 gcacgtaaat taattggatt atataacgat gcaggcatca gtaatgatcg cattttaatt
     3781 aaaattgcct ctacttggca aggtataaag gcagcagaac agttagaaaa agaaggcatt
     3841 aactgtaact taacgttatt attctctcaa gctcaagctc gtgcgtgtgc agaagcaggg
     3901 gtttacttaa tctctccatt cgttggtcgt attttagact ggtacaaagc tcacgaaggt
     3961 aaagaatatg ctccagctga agatccaggt gtaatttcag taaccaatat atacaattac
     4021 tacaaacaac acggttatga cactattgta atgggtgcaa gtttccgtaa tgtaggagag
     4081 atcattgagt tagctggttg cgaccgttta accatctcac caccgttatt aaaagagcta
     4141 caagagagcg atgaaaaatt agtttgcaag ctagattaca aaggtgaaat caagcctcgt
     4201 ccagaaaaaa tgacagaagc agaattctac tgggagcata accaagagcc aatggcagta
     4261 gaaaaattag ctgaaggcat tcgtaaattt gcgattgacc aagagaagtt agaagcaatg
     4321 cttgctgaaa aacttcaata gacaacgcat aaaaaaaccg gcattaacga taattaatgc
     4381 cggttttaat ttctataaat gattatttaa actcataacg tctaatcgtt tttagatcgc
     4441 tatcttcatt tttaatttca tcggcaagat gaacacgagc accaaccgct gcatgtgcat
     4501 catactcacg agttagagtc acagtttcac cattatctcg ttgaactgta agttcaacaa
     4561 catcgtttga tactgctttg ctagataaat gttgcattac ctttatcaga ataaacatct
     4621 gcagtacaag ctgctaacat aagtgaagct aatacagcta aagaaagttt tttcattaat
     4681 aatatatcct ctaggaaaaa ctaaaattaa agcagagaaa cattcaggtc tgaattagac
     4741 cctacgattc tcacacgttt gccaggcaca aaaccgtctt ctttcttttg aacgaccacg
     4801 atttctttac catcatcttt gcgaataacc atttccaatg aagaaacttg actcgctttt
     4861 tgttctactt gattaccaat taccgcaccg gcaactgccc ccactgcggt tgcaatcgct
     4921 tgccctgtac caccgccaat cgcattaccg gcaacgccac ctaatacacc accgccgaca
     4981 gtaccgatca caccttcact gcgtgcttga attttcacat cacgcactga aacaatagtg
     5041 ccataagcga tagaacgagc ttcttttgcc tgctcaccgg aataaacgct tccgctaaac
     5101 acgtctgtat ttgcacagcc aactaaagca aaacttgaca ttaatgcgac agctaaagct
     5161 aattttttca ttttgtttgt tctccgaaac gttaattttc tgacataatt acacttttta
     5221 tatcataagg gtggagcttt agacaataag gattacaaaa agttacattt ctcaagctga
     5281 tcgcaatgct tggatttggc aatctctccc cttctacctg aggttggctg atttttaatt
     5341 taatctcaga attatcagca agtctaaagt gcgacaatgc ccttgacacc cattgttccg
     5401 aactttcgtt gtctaacatc ggaaaaacca gctcaatatg ttcccagcct tcttctaaat
     5461 aaaccttatt tttcggaaaa ggcaactcga caatctttac aaattgtccg caaaattcaa
     5521 ccgcttgtat taatgcaaac agccctatcg gtctgccgtt tacctcgctc tctttaagta
     5581 aggttgcccc atcaagcaaa aggatcttcc actgttctgc ggtttcggtt tggttcattc
     5641 ttaccgcaag atgatcgatt tcatacgctg ctaaatcaat gccggcgatt tcagcaattt
     5701 gtcggatttt ctgttcaaat tgcgataaat cgccaaaaca agcggtcatt ttctcgaaaa
     5761 attttgcatt ttctgctata attttgtcca tttttttgta aatagaattt aaataggtta
     5821 aacagtgaat attcaacaaa ttttatcaga taaaattaaa caggcaatgg tagcaagcgg
     5881 tgcagacagc aatgtcgagc ctttagtccg ccaatcgggc aagccggaat ttggcgatta
     5941 ccaagccaat ggtgcgatgg gtgcagcgaa aaaattgggg atgaatccgc gtgaatttgc
     6001 ccaaaaaatc ttagagaatg ccgatttgaa cggtattgcc gataaattag aaattgccgg
     6061 tccgggcttt atcaacattt tcttaaaccc agaatggctg gcggagaaca ctaacagttc
     6121 attgcaagcg gtcaattttg gcataaaaac tgcaaatccg cagacgattg tgatcgacta
     6181 ctcctcgcca aacgtagcaa aagaaatgca cgtcgggcat ttgcgttcca ccattattgg
     6241 cgatgcggta gttcgtaccc ttgcgttttt aggcaataat gtgattcgtg ccaaccacgt
     6301 tggcgactgg ggtactcaat tcggtatgct gatcgcttac cttgaaaaaa tggaaaatga
     6361 gcacgccagc gaaatggagc taagcgattt agaagccttc tatcgtgcgg caaaagagca
     6421 ttatgattca gacgaagcat tcgccgaaaa agcccgtaac tatgtggtga aattacaaag
     6481 cggcgataaa tattgcttaa caatgtggaa aaaattggtc gatattacaa tgcaccacaa
     6541 tcaagagaac tacaatcgct taaatgttac gctcaccgaa aaagatgtaa tgggcgaaag
     6601 cctctacaat ccaatgttgc ctgaaattgt ggcggattta aaagccaaag gcttagcggt
     6661 ggaagatgac ggtgctttag tggttttcct cgatgaattt aaaaataaag atggcgaccc
     6721 aatgggcgta atcgtgcaga aaaaagatgg cggtttctta tataccacta ccgatattgc
     6781 ggcagcaaaa tatcgctacg agaccttaaa agctgaccga gccttagtct tttctgacag
     6841 ccgccaagct caacatatgc aacaggcatg gctcattacc cgcaaagcgg gctatgtgcc
     6901 ggacagtttc agccttgaac acccgttctt cggaatgatg ctaggcaaag acggcaaacc
     6961 gttcaaaacc cgtagcggtg gcacagtcaa actcaaagat ttattagatg aagcggtaga
     7021 gcgtgccgat aaactgattg ccgaacgttc aaccgagcta actgcggaag aaaaagccgc
     7081 cgtggttgaa gcggttgcga ttggttcggt gaaatattct gacttatcga aaaaccgcac
     7141 caccgattat gtgttcgatt gggacaatat gctgaccttt gaaggcaata ccgccccgta
     7201 tatgcagtat gcctacaccc gcattcgctc catctttgcc cgtgcgaaca ttgacgaaaa
     7261 tgcattgagc ggttcaatcc aactcaatga gccaaaagag cgtgcattag cagtgaaact
     7321 attgcaattt gaagaggcat taaacggcgt ggcaaaagaa ggtatgccac atattttatg
     7381 ccaatattta tacgagcttg caggtagttt ctccagtttc tacgaggctt gcccgattct
     7441 caatgccgaa gaaacaacca aaaacagccg tttgaaactc gctgccttaa cggcgaaaac
     7501 cttgaaacaa gggttggatt tactcggtat taaaactgta gagaagatgt aatacaaact
     7561 ctctcccctt gtgggagaga gaccgcttat gagcgttcag cgaaataagc agagagaggg
     7621 gacaagcggt aatttttatt aaaattttta cacattttcc cctctccctg atttttcttc
     7681 tgaacgaaga aaaatctgtc cctctcccac aaggggagag ggcatataaa aggaaacaaa
     7741 tatgaaattt attgacgaag ccctgattcg tgtagaagca ggcgatggcg gtaatggctg
     7801 tgtgagcttc cgccgtgaaa aatttatccc gaaaggcgga cctgacggtg gtgatggtgg
     7861 cgatggtggt gatgtgtatt taattgccga tgaaaaccta aacaccctta tcgactaccg
     7921 ctttgaaaaa cgttatgccg ctgggcgtgg cgagaatggt cgcagtgccg gctgtaccgg
     7981 acatcgtggg caagatatta ccctacgagt gccggttgga acccgtgcga ttgataacga
     8041 cacccaagaa attattggcg atttaacccg ccacggaatg aaaatgctgg tggcaaaagg
     8101 tggttatcac ggtttaggta atacccgctt taaatcctca gtaaaccgag ctccacgcca
     8161 aaaaaccaac ggtacgcctg gcgaaaaacg tgatttgaaa ttagagctgt tactgcttgc
     8221 cgatgtggga atgcttggct taccaaacgc cggtaaatcc acctttatcc gcagtgtctc
     8281 tgctgccaaa ccaaaagtgg cggattaccc gttcacgacg ctggtgccaa gtttaggggt
     8341 agcccgtgtg ggggccgacc gcagttttgt ggttgccgat attccggggt taattgaagg
     8401 tgcagcagat ggtgcagggc tggggattcg tttcctaaaa cacttggaac gttgccgtat
     8461 tttgattcac ttagtcgata ttatgccgat tgatgaaagc gatccggctc ataatatttc
     8521 ggtgattgaa tccgagcttt accaatacag cgaaaaactc gccgaaaaac cgatctggtt
     8581 ggtgtttaat aaaattgaca ccatcggcga agaagaagct gctgagcgag caaaagacat
     8641 tgccgagcaa atcggctggg aaggcgatta ctacttgatt tctgccgcta ccggtcaaaa
     8701 cgtgcaagct ctcactcgtg atattatgga ctttattgaa gccaacccac gcgaagtgga
     8761 ggaagaaaat aaagcacctg aagaagtcaa attcaaatgg gaagactacc acaacgaagc
     8821 aatgcaaaat gcggtagaag aagattggga cgacgattgg agcgaagaag atgacgaagg
     8881 catagagttt atttacgaac gccattagtg caataataca agcggttgtt tttaaacgga
     8941 gatttgcaaa tttccggaga aaaacaaccg cttgtaggtt taaggagagt ttatgcttag
     9001 ctcaacatcg tgcgatttat tcaatattcc gttcttccaa tttgctcaga tgaagaaata
     9061 ttgccctgag gagatccctc gaattaaggc ggaatataaa actcaatggg aaatttggaa
     9121 aaagctacat caggaagttt ctcgtcagct tgggcagccg tttgctccac cacatattga
     9181 gaagtggtgc aacggttggc aagttcgagc ccattttttt gcctattaca agtatgaatt
     9241 taatcgaaat tctgcggcta ttctttccgt gattttaaat cgtcgccgtt tgcaagtgag
     9301 ccttgattgg cattgttatc gagccgatcg ctcgcaaatt aacgtgcatc aatacaatca
     9361 atggtgggaa aatttagatc gggaaaagtt tgctgatttt gagatttggc acggaagtga
     9421 gagtgaatat gatgatttta gaaccgttag tcagatgtca gagcaagcgt tcaccctaac
     9481 taacgaggaa gatttttggt gtatcggcaa aaatgtggaa aaggacgatt tggataacat
     9541 tgatgtagta gaatttatct accaaaccat tcgggcatta ttgccacttt atgagaaatg
     9601 tcatcaataa acactaaaaa gagaggcgaa catcatttgt tcgccccttt caaaatttaa
     9661 gctatcactt cttttttatt ttcaatgcgt aaacggtagc gtttatccaa catacagagt
     9721 aaaccaccga gagccataaa cagcccgcca atccaaatcc agcgaatgaa cggtttataa
     9781 tacaaacgca ctgcccaaga gttatcttct aatttttcgc caagtgcagc gtataaatct
     9841 cgggtaaagc cccagtcaat cgccgcttcg gtcattccca ttcggctcac cgtatagaaa
     9901 cgtttttcag cattaagtgt ggcttcatat ttaccgtttc gagtaatttc aagctcggca
     9961 gtgccgcctt gatagtttgc cccatcggtg attttaatac ctttaaattc aaattggtaa
    10021 tctaaaatct cagctttatc acccacattc attctgacat ctcgttcaat gctgaaattt
    10081 tggctaaatg caatgccgaa cactgtcatc gcaaccccta agtgagccag caccattccc
    10141 caatgtgaac gggacagttt gaaaatgcca cttaagaacg agtggcgatg ggttgcacgt
    10201 tggtgtagct catacaggct aagtaacaca ataaagacag acatcatcgt gcctaacacc
    10261 acactcacgg taatggtgtt acggaataag tatggcaatc cgaatccaag caatgccatt
    10321 aaaatagttg caataattac cggtttacga atagcagaaa cttggtctct acgccatttc
    10381 actaatggtc caatccctaa tacaaatgag aaaggaacca ttaaaattaa gaacatttgg
    10441 tcaaaaaatg gtgccccgat tgaaatcgtc cctaagccga tttgtttgtg aattaatggc
    10501 agtaaggtcc ctaaaaacac caccgataaa aatgccatta ataaaatatt attaatgagt
    10561 agcatcgttt ctcttgaata gcgttcatag ttatctaagc ttttaatttc cgagcctttg
    10621 aatgcataca gcagtaaaga accacctact actaacacca agtaagccaa gatgtataaa
    10681 ccacgagttg gatctgaagc aaaggcgtga actgacacca aaatgcctga acgcactaag
    10741 aaagtcccca ctaaacagag cgagaaagca agaatcgcta ataagaccgt ccacgcttta
    10801 aatgtgcctc gtttttcagt cactgctaat gaatgaatca gtgctgttcc tgcgagccac
    10861 ggcattaatg aggcattctc gacaggatcc cagaaccacc agccacccca accaagttcg
    10921 tagtatgccc accaagaacc aagcacgata ccgagcgtta aaaataccca cgctgccatt
    10981 gtccacggac gagaccatct tgcccacgca gtatctaaac gccctgtcat cagtgaggca
    11041 atcgcaaaag caaaggcaac ggagaaaccc acatagccca tataaagcaa cggtgggtgg
    11101 aagatcaagc ccacatcttg cagcattggg tttaattctt tgccatcaat cggaaaattt
    11161 gggaaagttc tatcaaacgg gttggaggta aaaatcacaa acatcaaaaa gccgatgcca
    11221 atgaccccca ttagtcctaa cactcgagca acggcatctt ccggcatttt acgggtaaag
    11281 gttgctaccc cgacagacca aagcgacaac aaccaaaccc aaagcaataa tgagccttcg
    11341 tgagcgcccc acaccgcaga taaacgatat tgcaacggta aacggctatt ggagttgttc
    11401 accacatatt gcacggtaaa atcattcacc gcaaacagat aaaacagcga accaaaagag
    11461 acagtcaatg ccaaaaacat tgcccaagtc atcgggcggg caagagcaat taaggtgcta
    11521 ttttgctttt ctgctcccca aagcggtaaa actgccaaca agatagaaat cgctagggct
    11581 aatgccaacg tataattgcc taattctgca atcatttgct ttccccttgc acattgttgg
    11641 ctttttctgc ttccgcctcg gctttcattt tgcggtcggt ttccgattca cctttcagat
    11701 cttgttcaga cacacctgat tttttatgct gttcttttaa tttatcgcct aattccggtg
    11761 gcatatagtt ttcatcgtgt tttgccagaa cttccgtagc ttttaaacgg gttggttcaa
    11821 tcaacacgcc ttgtgccaca atgccttgcc cttcacggaa taaatccggc aaaattcctt
    11881 cgtattccac ggtaatcgaa ggcccgatat cattgagatc aaatactact tttaaacttt
    11941 tatcatcacg ctttaccgta tcttccacta ccattccgcc cacacggata cgctgaccaa
    12001 cttcaggctt ttgtttcgga tcatcatttt taccgtttac aatttcagac ggcgtgtaaa
    12061 acagatcgat attttggctt aacgcataaa gtgtcaagcc tgctgcgaca gaaagcccaa
    12121 gtaatatcga aaccaccact tttaatcttg atttgcgtct tggattcatc gtaatcaccc
    12181 ttcaaaataa atgcaaaatt gcataaaaac tcaaaaataa attagtgtaa gaatagcaaa
    12241 aaaccgcaaa acattcccga tatttcaagg aagttttgcg atttctcaaa tcaaatacct
    12301 ataaagaagt atgaggctat cgttgcaaaa aataaagtta tttcgaccgc ttgtttattg
    12361 tgatgtttgc tttaattttt cttcacgcac aatctctttt tttgcttgag ccaaaatcgc
    12421 tttctgttca cggcgactaa gccaaatcag cccaatcatt gcaatgaaac tgacaccata
    12481 agagagccat acataaaagc cgtagccacc cattgcaaaa aaatcgctga ttgattcaaa
    12541 ttgaaatgtc attgttctct cctactctaa actgattttg ccagttgttt tacccaaggg
    12601 cgattacgtt cgtcctttaa taaggcaatg cgataacgcc aaatgctaaa ccaagcggta
    12661 aaaattaagc taccgaaaat cgccaatagc aacggaatta acatttccac cgccatagac
    12721 ggtttatcga atttagtgat ggtcgcccct tgatgcaagg tgttccacca ttccaccgaa
    12781 aagtgaataa tcggcaagtt aatcacgcca acaactgaca gcacagccgc cgctttggct
    12841 ccggtttgtc tgtcttggaa tgcggaataa agagccatca cgccgatata aaggaaaaat
    12901 aacactaaag cggaggttaa acgagcgtcc cacacccacc aagtccccca cattggtttg
    12961 ccccaaattg caccggttgc aagtgaaata aaagcgaata ctaagccgat aggtgccatt
    13021 gaaatcatcg ccaagttagc ttggcgaatt tgccaaacca atgccaccaa gcctgccacc
    13081 gccattgagc catatacgcc catcgaccaa attgctgccg gcacgtgaat aaagataatg
    13141 cgatagctat cgccctgttg gtaatctttc ggggcaaaag ccaagcccca aacaaaagca
    13201 gccgctaaca taatcaaact tagccaacct aaaaacggtt ggattttccc tagcaaatgg
    13261 tactgcgttt ccgattttgc ataagggtgt agccatttcc acatatattt ctccaaagta
    13321 aataattccc ctcacccgtt tacaggagag ggacgatttg agcttcgttc agaagcgaaa
    13381 atcagggaga ggggaaaaag ttgcaaattt tcataataat tcgaccgctt cccctctctc
    13441 tgaaaaacac ctctgaacga ggtgtttttc ggtctctctc cctcaagagg gagagaggaa
    13501 gttttagttc aaactaattc ttaatgcacc ggcaatcgca aacggcgaaa aagttaaagt
    13561 aaccgctaaa attgctccga taatcgccag ttgtccgcta taacccatat ttaaggtggc
    13621 ggcttctaat accgcagcgg caaaaatcag taccggtaag aataacggga ggattaataa
    13681 actcagcaac gtaccgccct tgcgtaagcc cacagtgagt gccacgccaa tcgctcctaa
    13741 gcagcttaaa atcggggtgc cgagtaataa tgtcagcact aacgcccacc aaacgtgggt
    13801 ttcaagtgaa agcaaaatgg cagcaatcgg tgaaagtaaa atcaacggta agccggtcag
    13861 cagccagtga gcaatcactt tcgctaacgc aacctgcggc aaggcaagcg gcagtaacat
    13921 taattgctcg agcgaaccgt ctaaataatc atcacggaat aaccgctcaa aggaaagcaa
    13981 tgcagaaagc aaagcagcta cccacgcaat gccgccggca attttgccta ataattcggg
    14041 gttaggtccc attaaaatcg ggaatacggt aatcaccatt aaaaaaaacc acaacggatt
    14101 taaaatctcc gagggtttac gaaaggcaat ggtgagttcc cgctgaataa tagtcaataa
    14161 aatcatactt taaattgatc taacgaaata atacgcactt tgtcgctttc agcagcctgg
    14221 tggctggtaa aaatcactaa tctgccttgc tcgcaatgct gttcaatatg agcaatcaga
    14281 tccgccacac cctttttatc aatagcggta aagggttcat ctaaaatcca aagtttggcg
    14341 ttagtgagcc acaattttgc caacgccaca cggcgttgct gaccggctga caaatgcgaa
    14401 caaggcaaat cttcacgccc gatgagcgac actttcgtca atgcgtgcca aagggcatca
    14461 tcatcttgcg gtaactgttg gattttctgg tagaaacgca aattttccca cggtgttaat
    14521 tccggtttta cccccgaata atgccctaaa taaaatagtt cagaataata gtgatcacgc
    14581 tgtttttgaa ttgcaatatc gttccacagc acctcacctt ccgcaggtaa aaaaagcccg
    14641 gctaaaatac gtaacaggct ggtttttcca atgccgttat gcccttcaat ctgcacccat
    14701 tcaccacttt gcacggtaaa actgcaccct tcaaacaaac gggtttcgcc ccgttcgcag
    14761 gcaatctgat taagtttaag ctgatattgg gccgtttggt tcattatttt tcatctggtt
    14821 gaacatttta gccgaagtgt atcataagcc tttgatttaa cgtagcaaat aaattacttc
    14881 tttagaggta gcaagcggtc aaattttcaa aaagttttgc aaattttgat aagaatcaaa
    14941 ccgcttgtta cagagagagg atttccttca caaaaggaat ggttaattta cgctgggctt
    15001 ggagagacgc tttatccaac ttatccaata ttttagagag ttgctctaaa tccgttcccg
    15061 ctttttttaa cagaaaatga gcgacctcat cggacaattc cacccctttt tggtgagcat
    15121 ttaactgtaa aatttggcat ttttgttcat cggttaaatc gtttagctgg tacacttcgc
    15181 cccaagttaa gcgggaacgt aaatccggca attggatatt gagttggtgt ggtgggcaat
    15241 cggcactgat taacagcaag gttttttgcc cttcgttaaa caagccttgt tgttctcgaa
    15301 tttggttaaa caggttaaaa atagcaagtt cccattcagc atctcctgca atcgcttgaa
    15361 tatcatctag gcaaatcaca ttcagcagtt cggcattatc taacaccaac ggcgagaaat
    15421 aattggcttt agtgagcgga atataactag aagtttggtt atttaaaaga aagtggttac
    15481 ttactgcttt caacaaatga cttttaccgc agctcttacc gccccaaatg taaaaaaacg
    15541 gctgttgaac atccgtaaaa tttcgtttga gggatccaag caacacttcg ctgttttggc
    15601 tataaaaatt gtcgaaagtg tcttcatcaa tttgatgaat gggtagaggt aactgcaagg
    15661 ctttccttaa atctctaagt ttgatatttt tctaagaata gcggaaaagc aggggtttga
    15721 gaagtaaaaa tagtgagaaa atatccactc atttttctaa tgaagagatg acaagcggtt
    15781 gaatttccac ataattttgt caatctgacc gaaaacccac cgttttgtgt taaaaaaaga
    15841 ttgcagttag ctcaaaaaat tgtatattca aagctttcta cttaaaaagt agagtaaaac
    15901 aactattaca aacacaacgg agtgaatatg aaaaacatga ctaaattatc gctaataaca
    15961 ttagcgctag ccgcttcaag tagcgtcttt gctgcaccga aaacctttgt ttactgctta
    16021 gaggcttcgc cttcagcatt aagcccagtg ctatcaacag acggtgcaag ctttgatgtg
    16081 aacgccctcc cgatttataa caaattaacc gactttgaag acggtacaac taatgttatt
    16141 ccctctcttg ccgaaaaatg ggacatttcg gaagacggca aaacttacac cttccacctg
    16201 cgtaaaggcg taaaattcca cgacaataaa gaatttaaac caagccgtga gttaaatgca
    16261 gacgatgtag tgttctccat taaccgtcag tttgatccaa accatccatt ccacaaagtt
    16321 tccggcggta actacgaata ctttatcggt atggatatgc aaaatattat cgataaagtg
    16381 gaaaaagtgg acgatcacac cgttaaaatc agcttaaaag tgccaaatgc gccgttctta
    16441 gctaacttag cgatggattt caacgccgtt tactcagcgg aatatgcaga gcaatcctta
    16501 aaggccggca agcctgagcg tattgatacc aacccaatcg gcagcggccc gttccagttt
    16561 gtggattacc aaaaagatgc caccgttcgt tacaaagcct ttgaaaacta ctggcaaggc
    16621 acagcgaaaa ttgaccgctt agtgtttgca attactccgg atgcatcggt acgtttagcc
    16681 aagttacaaa aaggcgagtg ccacgcaatg ccttacccta acccggctga tatcgaagat
    16741 ctgaaaaaag atccaaatat tgaattaatg agccaatctg gaatgaatat cggctatttg
    16801 gcattaaatt catcgattaa accattagat aaccaaaagg tacgtcaagc attaaatcac
    16861 gctgtaaaca aacaagcgat tgtagatgcg gtatatcagg gagccggtca agtagcgaaa
    16921 aacccaattc caccaacaat gtggagctat aatgaagcgg ttcaagacta tgactacaac
    16981 cctgaaaaag ccaaagcatt gttaaaagaa gccggttttg aaaatggttt tgatactgaa
    17041 ctttgggcaa tgccggtatc acgtccatat aacccgaatg ctcgccgtat ggctgaactt
    17101 atccaagaag actggaaaaa agtgggcgtg aatgcgaaaa tcgtcagcta tgaatggggc
    17161 gaatatctca aacgcttacg ccaaggtgaa gcggcaacct caatgattgg ctggacaggc
    17221 gataacggtg acccagataa cttcctcaac accttattaa gctgctcagc ggtggaagcc
    17281 ggttcaaact acgccaaatt ctgccacaaa ccgtttgaag aagtcgtgct tggtgctgcc
    17341 caagaaagcg acaaagcaaa acgtaccgag ctttataaac aagctcaagt gatcttcaaa
    17401 gagcaagctc cttggattac gattgctcac tccaccgttt acttcccggt gcgtaaagaa
    17461 gtaaaaggtt atgtgatgag tccgttcagc ttacataact tctacaaagt agatttagcg
    17521 gataaataat ccgccaacaa gcggtagaat ttgcagattt ttttacaaat ttgaccgctt
    17581 gtcctcccct ctttgaacta cgaggggcag gggggaaatt tggcagaagc gattgccgaa
    17641 gtgagaggat tgtaaaagag gaaataaatt ttctgtctta ttgattattt tcttcgttaa
    17701 ttactactgt caaatctccc ctaccccctc tttgctaaag aggggaatca gatcgagaga
    17761 tcagacaact ttgatgaaaa tccaacctaa gagattttaa atgttttcat ttattttaaa
    17821 acgtgtgcta atggtgatcc ctacctttat agcgattacg ttaattactt ttgcccttgt
    17881 gcattttatc cccggtgatc caattgagat ccgaatgggg gaacgtggat tatcgcctga
    17941 ggttcatcaa caaatgatgg aacaactcgg gctgaaccga ccgttgtttg aacaatacat
    18001 cagctacatc aaaggtgtat tgcacggtga tcttggtaac tcatttcgta acaacgaacc
    18061 ggtgctgaag gaatttttta ccctattccc agccacggtt gagttggcat tttttgccct
    18121 gctctggtcg ttgattttcg gcattattct cggtgtgatt gctgcggtga aaaaagaaag
    18181 ttggatttca cacactgtaa ccacgctttc actgaccggc tactcaatgc caattttctg
    18241 gtggggcttg attttaattc tttatttctc caccccgctc ggcttaccgg cttcaggtcg
    18301 tttaccatct gaatactgga ttgaagccga aaccggtttt atgctgattg atacttggaa
    18361 ttcggacgaa ccaggggcat ttttagcggc aattaaatct ctgattttgc cgtctatcgt
    18421 actggggaca atccctcttg cagttgtgac ccgaatgact cgctcttcaa tgttggaagt
    18481 gttgggtgaa gactatatcc gcaccgccaa agccaaaggc ttaaacacta cccgaattgt
    18541 gattgttcac gcattaagaa atgccttgat tccggtggta acggtcgttg gcttaattgt
    18601 cgggcaactg ctttcaggag ccgttttaac ggaaaacatc ttctcgtggc cgggtatcgg
    18661 caaatggatt attgatgcaa tcaacagccg tgattaccct gtactacaag gctcagtgct
    18721 gattattgct actattatta ttttagtgaa ccttacggta gatctactct atggcattgt
    18781 caatccgagg attcgacata gttagaaaaa ttccttcgat ttttcccctc tttagcaacg
    18841 agggagttac acaagcggtt caaattccgc aattttttac aagattattt ttagttggag
    18901 ttaatgatgt caggaataac ggcggtaaat ccacccgcac ccaaaacacc gttacaggag
    18961 ttttggtact atttttgtca aaatcggggg gcattaatag gacttacctt tattgcaatc
    19021 gtctttgttg cgtgcgtatt cgcaccttgg gttgcccctt ttgatccaat cgaacaaaat
    19081 cgcagtgcgt tattgctccc tcctgcttgg cttgaagggg ggaattccgc tcatctgctg
    19141 ggtactgacg atattgggcg tgatattctt tcccgtatta tttatggttc aagattgtcc
    19201 gtctttatcg gcttagtcat tgtgctactt tcttgcgtat tcggcgtgat tttaggtcta
    19261 cttgctggct actatggtgg cacactcgac atcatcatta tgcgttttgt tgatattatg
    19321 ctggcgattc caagcctgct tttaactatc ggcgtggtca ctattttagg cccttcattg
    19381 ataaatgccg ctattgcgat tgcgattgtc tccattccaa gttatgttcg cttgacccgt
    19441 gcttctgtat taagcgagaa aaaccgtgat tatgttactg cttctcgtgt tgctggtgcg
    19501 agcgtgcttc gcttaatgtt tgtggtgatt ttacctaact gtttagctcc gcttatcgtt
    19561 cagatgacga tggggatctc aaacgctatt ttagaacttg ccgccctcgg cttcttaggc
    19621 attggtgcac agccgccaac accggagctt ggcacaatgc ttgccgaatc tcgtggcttt
    19681 atgcaatcgg caaactggct ggtgaccatt ccgggtctag cgattttatc gttagtatta
    19741 gctttcaact taatgggtga cggcttgcgt gacgccctcg atccaaaact gaaacaatag
    19801 gagatctaaa atggcattat taacggttga tcaactttcc gtccattttg gtgaaactaa
    19861 aacaccattt aaagcggtgg atcgtatcag ttacgaagtc aatgaaggcg aagtattagg
    19921 cattgtgggc gaatccggtt caggaaaatc ggtaagttct ctcgctatta tgggcttaat
    19981 cgatttcccc ggcagggtta tggctgaaaa attgtatttt aacggcaatg atttattggc
    20041 attaaaacca aaagaaaaac aacagattgt aggggctgat gtctcaatga tcttccaaga
    20101 tgcaatgacc agcttaaatc cgagctatac tgtgggctat cagattatgg aagccctaaa
    20161 agtgcatcaa ggtggctcaa aagccagccg tcgtgagcga gcgattgagt tgctgacgat
    20221 ggtcggtatt cccgatcctg aatcccgttt agaagtttat ccgcaccagc tttcgggtgg
    20281 tatgagccag agagtgatga ttgcgatggc gattgcctgt cgcccgaaat tattgattgc
    20341 cgatgagccg actactgcgt tagatgtgac gattcaagct caaatcattg atttattact
    20401 tgaattacaa cgcaaagaaa atatggcgtt gattttaatc acgcacgatt tagcgttagt
    20461 tgccgagtct gcccatcgca ttatcgtgat gtatgcaggg caagtcgtgg aagagggcaa
    20521 agccgagcag atattcaaag caccactgca cccttacacc caagcattgc tcaaagcctt
    20581 accggaattt gccgaaggga aatcccgcct gcaatcacta ccgggcgtag tgccgggcaa
    20641 atatgaccgc ccacaaggtt gcttactcaa ccctcgctgc ccgtatgcaa ccgaaaaatg
    20701 ccgaaccatt gaaccggcaa tgcagataat caacggcaga caggtgaaat gccacacgcc
    20761 actgaatgca cagggtgagc cgataaggat agctgtataa cgtcataaag agtagggacg
    20821 caatgcttcg cgtccgttac aagcggtgat ttttaaccga tttttgcaaa ataacgatag
    20881 tggacgcaaa gcattgcgtc cctacatttt ccgagaagga aaacagaatg aaagaaaata
    20941 attctctccc accattcctc aaagcagtgg acttaaaaaa atactaccca gttaaaaagg
    21001 gaatgttcgc taaaccgaaa acggtaaaag cgctggatgg tgtctctttt acccttgaac
    21061 gtggcaaaac ccttgcgatt gttggcgaat ccggctgtgg aaaatcaact ttggggcgaa
    21121 tgctcactat gattgaaagc ccaaccgaag gtgaactgtt ctacaacggg cagaatttct
    21181 tagtcaatga caaagaaacg gctcaactac gccgtaaaaa aatccaaatt gtgtttcaga
    21241 acccgtatag ctcgctcaat ccacgcaaaa aagtaggtag cattttagaa gaaccattat
    21301 tgattaacac caacttatcc gcaaaagaac gcaaagaaaa agtgttggaa atgatggcga
    21361 aagtcggctt aaaaccggaa ttttacgacc gttatccgca tatgttttcg ggcggacaac
    21421 gccagcgaat tgcgattgct cggggcttaa tgttgcagcc tgatattgtg gttgccgatg
    21481 aacccgtttc cgcattagat gtttcggttc gggcgcaagt gttgaatttg atgatggatt
    21541 tgcaagaaga aatgggcttg tcttacgttt tcatctcgca cgatttatcc gtagtggaac
    21601 atattgccga tgaagtgatg gtgatgtatt tagggcgttg cgtagaacaa ggggatacca
    21661 aaactatctt cagcaatcca cgtcaccctt atacacaagc gttactctcc gcaacccctc
    21721 gtttgaaccc ggagcaacgc cgtgagcgga ttaaactgac tggcgaacta ccaagcccgc
    21781 ttaatccacc aaaaggctgt gcctttaacg cccgttgcag atttgcaacc gatcgttgct
    21841 atgtggagcg accagagctg aaaacctatc aagacggtac tcgcattgct tgttttgtgg
    21901 tggaggaaaa taattaggca acgctcgcta tttaaaaggt taaagttttt caactttaac
    21961 ctttattttt catacttaat actcctcatc ttttgtagca aaatctttca ttaatttgct
    22021 gatatgctca caatggtgtt taaatgacaa tacgggcaaa taatcaaatg cgttttaacg
    22081 ccaatcttct cttttaaagt gagttttcgt tcctttgagt cagaaattaa ccttgttact
    22141 tgtcggcaat tcatctattt ctctccgtta atttccttga aagacattgt tgtaactgca
    22201 gccttgctcg atagattaat gtatataaat tatctgatgt aatatttact actcgacaaa
    22261 tttcatctga ggttgcctct aaatattccc tcatcataaa taccctagct tgttttgcag
    22321 gtaaattgct taagcaaact tcaaataata tccaaaattc tttggaataa acagcttctt
    22381 cctgccagct agaaggataa tattcttctt tccaatgccc ataattatca aaaaagtgat
    22441 tctcttcgtc atcatcagct agatcacttt ctagtactat acgatctttt ttacgtaaat
    22501 aatcaataat tttatttttt agaatagcaa atatccaggt tttcaatgct gctttacgct
    22561 ggaaattatc aatatttttt attgcattaa cgaatgcttc ttgaaccata tcttcagcaa
    22621 gagcaatatc ttgtaattgt aactgagcaa atttcaacat ttgctgacga atatcggcaa
    22681 gctgttccga tgaaatatct aaagaaatct tg
//
LOCUS       DANLZQ010000025        22661 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.025, whole genome shotgun sequence.
ACCESSION   DANLZQ010000025 DANLZQ010000000
VERSION     DANLZQ010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 22661)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22661)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22661
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.025"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(<1..895)
                     /locus_tag="PXE50_000934"
     CDS             complement(<1..895)
                     /locus_tag="PXE50_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5621863.1"
                     /translation="MSKIEFEKIPNSIRKPSVLTEYNNKDAVTTLPTNEQEVLIVAPM
                     LNGEAAFTAPQKIFSDVEAENLFGKGSVAHLMVRQAIQNNPLIRLTVVGLKDHEAGIA
                     ATGQVSFTGTVTYAGVVRITIAGTAYEVAAAKGEEAQAIVARLVNVINAASYSPVVAS
                     VESETTLKLTSKAKGEISNEITLATRNTATGLTLEARAFDNGQRNALIAPALASVAGT
                     HYNVIISPFSDDENALALRSHLESVSAPIEDKPAIGVMGWRGTYATGTTLTASLNSER
                     IIVGWYKGATESNAMIAAGLGA"
     gene            complement(895..1074)
                     /locus_tag="PXE50_000935"
     CDS             complement(895..1074)
                     /locus_tag="PXE50_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2635 domain-containing protein"
                     /protein_id="HDL5621864.1"
                     /translation="MLKVKAAKGVRVPVENRPHHYIEQEAVEVENTLYYQRRIADGDL
                     IVVKETKSAKETGGK"
     gene            complement(1075..1716)
                     /locus_tag="PXE50_000936"
     CDS             complement(1075..1716)
                     /locus_tag="PXE50_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1834 family protein"
                     /protein_id="HDL5621865.1"
                     /translation="MISKIERALIERLTLGLGKMVYAVAGYAGEINDEKLDVLRLPAC
                     LVSYGGSAFEAKSMGVRGKRYQATDVFVVLVITRSMRNQTAGRLGGVTSREVGVNQLL
                     GAVKTLLINQTLDGLVHPIQPKRIRTIWNNAEVKKEKLSAYAIEFEISYNECNVLDDG
                     RFPEGVEPNEQVFKQYQGKLDEPQGDLSGFNNRIFDPNNNAETAFRTEFKDGD"
     gene            complement(1713..2138)
                     /locus_tag="PXE50_000937"
     CDS             complement(1713..2138)
                     /locus_tag="PXE50_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1320 domain-containing protein"
                     /protein_id="HDL5621866.1"
                     /translation="MYALVDDFVLRIGEQESIELTDREMVGVVDEATLEVALADSSSQ
                     IDGYLSGRYRLPLKTVPQNLKRICCDLARYHLTSKSLVTMTEEVENRYKLCLKELENI
                     SKGVVSLAVDETNEEESATGENTVQFFNGGNRIWGRDKR"
     gene            complement(2138..2479)
                     /locus_tag="PXE50_000938"
     CDS             complement(2138..2479)
                     /locus_tag="PXE50_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621867.1"
                     /translation="MAKPKKNDNEALNTNENTPLEDKVNEQPEDKTDEQPKPPESETK
                     PDDGALINPIAFEVKLKSIHPQATYGRCGYRFNKETAVEIARKALSDEQIITLANDPY
                     LEFVPVVEGDA"
     gene            complement(2527..3444)
                     /locus_tag="PXE50_000939"
     CDS             complement(2527..3444)
                     /locus_tag="PXE50_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mu-like prophage major head subunit gpT family
                     protein"
                     /protein_id="HDL5621868.1"
                     /translation="MFKKSELLKALDTAFRKEFSAGLKVLEPQWGTVAMKVSSSTATN
                     TYAWLGQFPKMQEWVGDRQIKNMQAQGMTIENKLFESTVAVPRTAIEDDQVGLFTPMV
                     KQAAQSAAELPDDLVFSLLKKGKTTLCYDGQNFFDTDHPVYQNVDGTGTSKTQSNITT
                     GSASGKPAFYVLDDSQAIKPLIWQERTTPEIETKFDPSESDHVFMKDQYLWGVRARGN
                     AGFGFWQLIHRVEDSELNSETLEKVLTAMRTLKGDGDKQLNIRPTTLLVPPSLEFAAR
                     KLLEAELIDGTTNTLKGVLKVVVNPFIAE"
     gene            complement(3444..4514)
                     /locus_tag="PXE50_000940"
     CDS             complement(3444..4514)
                     /locus_tag="PXE50_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage protease"
                     /protein_id="HDL5621869.1"
                     /translation="MFKHKFKLNPIALSFKLNQEANGRIQLFPFGWFEAQDGRGGRWY
                     VGDENGYALADDINNTAIDLMIDYEHQTLYIAENGKGNPAAGWITKAEYISGEGLFAD
                     VKWTPQATQEIKDGVYRYLSPLFLTDGSGMVIKVLNAALTNRPALHNLQEVVAMSSQF
                     AKFLTPEEENPKMKELLIKLFALSANATDEQITEKLTALEKAKGDSPVALSDVYTELA
                     KEKSQVVALSAKVNHPDPAKFVALSDLQAVQTELNGLKQQINDKERDALIQTALSDGR
                     LLPAQKAWAEKLGKQDLVALSDFLKTVTPNPALASTQSGGEDPNKGTEKVALSAAEIA
                     AAKSLGLSEAAYIEKYKTEESK"
     gene            complement(4773..5189)
                     /locus_tag="PXE50_000941"
     CDS             complement(4773..5189)
                     /locus_tag="PXE50_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HDL5621870.1"
                     /translation="MIEIQIHGIDEIIATLNRIAAKTANKTDLMRNIAGKMESAVLTN
                     FDEGGRPKWLGIKHRQGTPLVDTENLMGSITADYNNDSAIVGTNEPYAAIHQFGGMAG
                     RGRKVKIEARPFLQLTSQDRQDILDDVQAYWQKLLD"
     gene            complement(5340..6639)
                     /locus_tag="PXE50_000942"
                     /pseudo
     CDS             complement(5340..6639)
                     /locus_tag="PXE50_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248654.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
     gene            complement(6626..8251)
                     /locus_tag="PXE50_000943"
     CDS             complement(6626..8251)
                     /locus_tag="PXE50_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF935 domain-containing protein"
                     /protein_id="HDL5621871.1"
                     /translation="MSKKKHNKQIKPNLNPIKNQELQTDLAEITATGRVLSDHPSNFI
                     TPAKMKAIFEDTENGDITAQHELFMDIEERDSSIFANIQTRKRAALGVDWAIVAPRNA
                     TPQEEKLRDEVDELFYQLGNLEDLVMDCMDAVGHGFAALEIEWAFNGKLWYPNAFIHR
                     PQSWFKWDKHDNLLLKTRQNTEGEPLREFGWVVHTHKSRSTQAARNNLFRSLAWLYMF
                     KHYSIHDFAEFLELYGMPIRIGKYGAGATPNEKQTLKRALAEIGHNAAGIMPESMSIE
                     LHNAANAGGAAGNNPFLQMVDWCEKSIARLILGQTLTSGADGKSSTNALGNVHNEVRR
                     DLLVSDVKQLGQTFTQQIILPFLQINFGNIDPTRIPSFEFDTKEPADLALFAESLPKL
                     VDIGMPIPVQWAMDKLGIPEAQENEAVLGRSAPPQAVGLSANFPQKMTACECGCGGKV
                     HALSAQTKTGIKEQDALDDLADEAFSVPDFNAQFDPITKKAVAVVMACSSYDEAAEKL
                     AAAYPDLVSEEHDRYLANALFLADLLGAANAES"
     gene            complement(8320..9945)
                     /gene="terL"
                     /locus_tag="PXE50_000944"
     CDS             complement(8320..9945)
                     /gene="terL"
                     /locus_tag="PXE50_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HDL5621872.1"
                     /translation="MKIKEFEKELEELRRQLQQNIEASFEGWDDKPQAISERRQKVLD
                     PVHGFEYFVQAYFPHYVRSEHKSQLHHYLFENLPLSVSDLSKSVRQAIAAPRGEAKST
                     ICTQLFPLWCLVRDLKRYIIIAMDTKEQAYSMLEAIKVEIESNPRLRIDFPEVAQGKV
                     WRAGVIMTAKKQKVEAVGAGQKLRGRRHGAYRPDLVVLDDIENDESVETPAQRNKLHN
                     WVLKAVLKLGAAGEKFDVIYVGTILHYDSVLSRILNTKGWRRVRFKAILRFPGNMALW
                     DEWENIYLSEEGDDDTMSDLFYQQHKAEMDKGALVSWLARPILYLMKIRASDGHSAFD
                     SEYQNDPVSGDDAIFANSIQYWTELPDDLIYFGALDPSMGKAGASRDPSAILVGGYHR
                     ESGKLYVVEAQIKKRLPDLIIEDVIRLHSQYNCHRWFVETVQFQEFLQTELVKRSAQR
                     GKPVPATATKPNSDKMLRIESLQPHIANGLILLHRSQSTLESQLRHFPKADHDDGPDA
                     LEMLWRNALSSSAPIEWESVDDFDGEYRSKWRH"
     gene            complement(9949..10095)
                     /locus_tag="PXE50_000945"
     CDS             complement(9949..10095)
                     /locus_tag="PXE50_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621873.1"
                     /translation="MAKKKQTVVHKHYSFRWIVQLACIFGAIKLMLNGTDGWGWLLLI
                     AACM"
     gene            complement(10095..10595)
                     /locus_tag="PXE50_000946"
     CDS             complement(10095..10595)
                     /locus_tag="PXE50_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1804 family protein"
                     /protein_id="HDL5621874.1"
                     /translation="MAHDVEVQKAVRQAYVFDRLSLEMAAERAGVSFGTARRWKAAAE
                     KNGDNWEKARDVQAMASGGIENIAQGLLAGFLIKYRTLMTELEENTEMPTAAKVEALA
                     ALADSFAKMTASSKKLLPETSAMATAMRAIEMMANIVKTKKPHLLPDFLEMLDELEVQ
                     FKKEFK"
     gene            complement(10603..10857)
                     /locus_tag="PXE50_000947"
     CDS             complement(10603..10857)
                     /locus_tag="PXE50_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621875.1"
                     /translation="MSRKKQKQTDSEKLDLILGGLNELNDKVDKQNEEIERLHREIQA
                     TNRLVNEMARKNRRDAVVAGGLGGGIVAVGFELLRLKFGM"
     gene            complement(10857..11114)
                     /locus_tag="PXE50_000948"
     CDS             complement(10857..11114)
                     /locus_tag="PXE50_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621876.1"
                     /translation="MIDEKLFQMLISFVVAPLVAFVGKVIFDRINRNEQTVKELKAEM
                     ESKYQSKELAHEVNRGIKEKLDDILDSLKEVNQKLDKKADK"
     gene            complement(11107..11262)
                     /locus_tag="PXE50_000949"
     CDS             complement(11107..11262)
                     /locus_tag="PXE50_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621877.1"
                     /translation="MKLIKKLRQRWQQWRFYRRRPDLAELHNVVRAAVAQGNQHPVGR
                     AKRGRYD"
     gene            complement(11277..11636)
                     /locus_tag="PXE50_000950"
     CDS             complement(11277..11636)
                     /locus_tag="PXE50_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2681 domain-containing protein"
                     /protein_id="HDL5621878.1"
                     /translation="MITQQIAGVVGVVSTILAYAFYKSWQLKQERKLTATLKAEKQQQ
                     AVEIQQKNAEVKNAKIQQKHVSETRRIQPSAIDEQLHQHGYFRDDNGLHGVRSDLPEP
                     CGHNGNETPSACTQSDL"
     gene            complement(11633..11878)
                     /locus_tag="PXE50_000951"
     CDS             complement(11633..11878)
                     /locus_tag="PXE50_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2644 domain-containing protein"
                     /protein_id="HDL5621879.1"
                     /translation="MKQFLLDLITNKDGTASTTGFIQFMSWLVLSGILIHAYLYDKPF
                     ISDWWFAYAGICVLGSPATKGVVSALKQKERSREAEE"
     gene            complement(11881..12414)
                     /locus_tag="PXE50_000952"
     CDS             complement(11881..12414)
                     /locus_tag="PXE50_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 108 protein"
                     /protein_id="HDL5621880.1"
                     /translation="MTEPIKNKATIADFNLAFDRLIGHEGGYVNDPKDPGGETNWGIT
                     IHTARANGYTGSMRAMSRADAKTIYLKAFWQRYNCEQFPPELAFQFLDACVNHGSGNA
                     SRMLQRAVGVADDGIIGKVTLAAIERYSVADVGLLFQAERLEFYTKLKHFDRFGRGWI
                     NRMAGNLRYFAKDTVEE"
     gene            complement(12500..12925)
                     /locus_tag="PXE50_000953"
     CDS             complement(12500..12925)
                     /locus_tag="PXE50_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mor transcription activator family protein"
                     /protein_id="HDL5621881.1"
                     /translation="MSEFESVEHYLPETVKEIVGVIGLPATEKLIKAFGGFSFQFSNG
                     KLYFNKLKEVLGQDDAVKLQAYMGACEVYLPRCETALRMLRNQQIYADYCQLTEQGGL
                     SGRLAIMQICPKYSVCDRVAWEAVRYYQRKHTVSQATLF"
     gene            complement(12996..13211)
                     /locus_tag="PXE50_000954"
     CDS             complement(12996..13211)
                     /locus_tag="PXE50_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL5621882.1"
                     /translation="MIENPEFGYTPSNLKMLRKHHNLTQTEVANILGVGQRIVMRWET
                     ELSSTAARSDMPYTKWAELLKNLQKNF"
     gene            complement(13230..13622)
                     /locus_tag="PXE50_000955"
     CDS             complement(13230..13622)
                     /locus_tag="PXE50_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621883.1"
                     /translation="MTDYQKLLNALLNDADEDCFAVYGLRATTDVHQVGDELGNSFVW
                     VDGEKTDEELDGICTMGIQNADEAGLLNAIKNLGRDACKKFDVEFKGFQSYCGQNFIL
                     VKGDSARGGEDKGESIIRNPIVVAVFNS"
     gene            complement(13748..14095)
                     /locus_tag="PXE50_000956"
     CDS             complement(13748..14095)
                     /locus_tag="PXE50_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621884.1"
                     /translation="MKELLLTTLCLLSLPAIAMTEKAEQETANALVSGDYQQLRNVAY
                     GMETGSFGHDHNPIAACALRRVILLVNSDKVDMTDFNNEAIACRKIEVTDNQQAWETA
                     FTIAKSISATKKK"
     gene            complement(14184..14609)
                     /locus_tag="PXE50_000957"
     CDS             complement(14184..14609)
                     /locus_tag="PXE50_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory protein GemA"
                     /protein_id="HDL5621885.1"
                     /translation="MQPQTRKQMIQKIHIGKNELKLDDNAYKMLLLEAVDKPSCSMMT
                     DSELMTVLQTMKAKGFVVKSKKYGKRPTASKTAPHRQGLINKIGALLYQSQKPWDYAH
                     AIAKRSFGIERVQWLTDDQLHKLVQILASYNHRHGMSVK"
     gene            complement(14593..15147)
                     /locus_tag="PXE50_000958"
     CDS             complement(14593..15147)
                     /locus_tag="PXE50_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621886.1"
                     /translation="MKLCKCPICHSDISFEALIEDDAGRELLNTIVNIGGNCGRAVVA
                     YLGLFKPQKNSLANSRALKIVQSLLELYPPSNVLEKALMDTVEQVRRNRRETGRCEPL
                     ANHNYLKKVYESVKPQFAVVRSEAKAVSSLEQQQRQADQKKHDAVMYVERMKQMGQLE
                     AVKNTESYQIWLKWQEEKQNATAN"
     gene            complement(15147..15317)
                     /locus_tag="PXE50_000959"
     CDS             complement(15147..15317)
                     /locus_tag="PXE50_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621887.1"
                     /translation="MEYQKIPEYRLCKKKSGEIVLQQLVICELTPATWHNPYPDSRTY
                     WVDLETIEEGTE"
     gene            complement(15388..15963)
                     /locus_tag="PXE50_000960"
     CDS             complement(15388..15963)
                     /locus_tag="PXE50_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5420 family protein"
                     /protein_id="HDL5621888.1"
                     /translation="MKFRFFKGDITQEPLKSIYADYQVSKEERKDKLNAILEKYPFND
                     GLISRSGWFHRIVIGIACKATNISQVLDVKGFKVGKFNDEFYLVKPDKRYEKGKELAE
                     DFKAINEIYEKHRDFSPYILKRLNMLYFVSDFSYSPTSGRSYLAVAGICENTLLVEMP
                     MPIDKNDEPFPEIAEGLVEIKESEFLAIQGK"
     gene            complement(15986..16168)
                     /locus_tag="PXE50_000961"
     CDS             complement(15986..16168)
                     /locus_tag="PXE50_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621889.1"
                     /translation="MTEQEKNELNSQLNEALMQIIQAQKYLKQSDFIRSGVYLGTVQD
                     LLPKVHLKLLTANRKH"
     gene            complement(16235..16381)
                     /locus_tag="PXE50_000962"
     CDS             complement(16235..16381)
                     /locus_tag="PXE50_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANR family transcriptional regulator"
                     /protein_id="HDL5621890.1"
                     /translation="MKTEQKATEFDRYKHYAEKAAEAERKGNYAEAQDHWKVAKLSAK
                     KTAN"
     gene            complement(16700..17317)
                     /locus_tag="PXE50_000963"
     CDS             complement(16700..17317)
                     /locus_tag="PXE50_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3164 family protein"
                     /protein_id="HDL5621891.1"
                     /translation="MSKVTIGNEIYWKDADGNLKPEALVKEIDKERDELVRQFVSKAQ
                     ALSKALGDFKQSVFDDVGAFVSLSADKYGVKIGGAKGNITLFTYDGEYKLQLAVQENI
                     RFDERIHAAKALIDECLHDWSEGAKPELKALIDNAFEVDKEGNLSTAKILSLRRVEID
                     DARWNQAMTAISDSVQVIGSKGYIRFYKRDENGKYQPISLDMAGV"
     gene            complement(17330..17521)
                     /locus_tag="PXE50_000964"
     CDS             complement(17330..17521)
                     /locus_tag="PXE50_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621892.1"
                     /translation="MKKRRMIYALYVGEENVADGTAEELAERLGVEAKTVRFMSSPAH
                     NKRVKYNGKAIRTVKVGLE"
     gene            complement(17524..17844)
                     /locus_tag="PXE50_000965"
     CDS             complement(17524..17844)
                     /locus_tag="PXE50_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621893.1"
                     /translation="MQKVYSEKAGEMMNPLNAFIHDSLVKLEIATLECEAMELEVERV
                     EFEAKSPPRLVLRDNCKTQDLVKNGLASLFGMKTKGGRRYDSYQMQVRGVKCVWESER
                     VTKV"
     gene            complement(17855..18736)
                     /locus_tag="PXE50_000966"
     CDS             complement(17855..18736)
                     /locus_tag="PXE50_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDL5621894.1"
                     /translation="MKNQELRALMDSKGYQQKQVAQLLGVSVATVSLYLKGDYNGNVA
                     EMDRKVDELIERDKAKVVEAKYNAAFVPTLAARRGMEVMQFAHIEGEINVIFGAAGLG
                     KTQMLKEYERRNSSATLIEVDPSCTPKVLLRKIAEAVGANARGVNNELLESIVNKLKG
                     SERLLMIDEAELLSTRSLEFIRRIHDLTSVGVVLAGMPRLLVNLKGKNNELAQLYSRV
                     GFACDLGNALSEEDLGLLAESALGTNEFNAPLIKACHGNARRLSKLMRGVVRSSEINQ
                     TPISKDLVEQYSKMLIS"
     gene            complement(18740..20677)
                     /locus_tag="PXE50_000967"
     CDS             complement(18740..20677)
                     /locus_tag="PXE50_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL5621895.1"
                     /translation="MKDWFSAKELAGISGLSKYPTNVTRQAKKEQWATRPLKGVKGGG
                     FEYHINSLPTEVQTEIRSRFMSAVVEAKPKKLPVVRAEVDVGNLTTKQREIADARMAL
                     VAYVLELEGSMSRIKAITYLCNLAKQGEMPPHLAELVAVANAKKTAKRTLSVRTLNGW
                     VVDYCKAENAEQRLKLLAPQVRQETKPEEIWWLSAFLGVYRQKNGICLTEAYREFEVE
                     WAYQYADNPLLLAQCPSLSQVQRAMNKLPLYVKEYGRRTGSHYKQLLSYVKRDWSVLR
                     ANDVWIGDGHSLKLKVAHPIHGKPFTPELTMIVDGAGRKVVGWSLALSENAFAVADAL
                     RHAISLHGVPAIYYSDNGGGEKNKFLDAEITGMLPRLGIRHETGIAGNPQGRGIIERL
                     NKTIGMTIARQFETGYATGADPETVRKTLYAVNSLANAKGELTPLQRKAQGKLPTWQQ
                     LIEVIQSVIDWYNNEHIHSEIRTTPARKYQQMLHAEDVVMLSPIELRDMSRPEFIRKP
                     DRGWVSWNNNHYFNLKLLDFDREEVVIGIDIHNAESVQVRTKDGRFICEAIWNGNTRE
                     AFPVAMVEQQRKERHKRRANLKQQQLDEINAELNPVLTIEQKNDFSLLATARKPKKEV
                     EPIFLTRAEKEDYEKKLAVGG"
     gene            complement(20692..20919)
                     /locus_tag="PXE50_000968"
     CDS             complement(20692..20919)
                     /locus_tag="PXE50_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5621896.1"
                     /translation="MNKKKRAQDMHRADIRAELMKKGITFSQLGIENGLSKTTVRNAL
                     DKPYKNGEEIIAKALGKTPAEIWPSRYPDVA"
     gene            21129..21857
                     /locus_tag="PXE50_000969"
     CDS             21129..21857
                     /locus_tag="PXE50_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5621897.1"
                     /translation="MKSFDKVWFSAKELEELDLPDLPKQATNITRKALKELWIKRDAV
                     GVKGGGNEYHITSLPRKAQEALGFKSGINAIKDSIVREITPEEQNKGSELSGTVLNNI
                     ISMIDSFASIKVSAGFGSFNEGVTKPDGQEPYADSLLHTLGVNAKKCAVFWASGDSMY
                     PTIDNGDQLLVDLSRNEIRGDNNIYIVQNGDSVWVKRVKLLWDGVELISDNREEYELI
                     KITADQAQNLQIIGQVVHIGHSLV"
     gene            complement(22142..22579)
                     /locus_tag="PXE50_000970"
     CDS             complement(22142..22579)
                     /locus_tag="PXE50_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF412 domain-containing protein"
                     /protein_id="HDL5621898.1"
                     /translation="MLSLFDAGQRYLNTLPNQKKLANFMPDYHIIRLVKFSSKVMPAF
                     ACFALVWQYCFTDPTQSILANSVLTAVFAISIPFQGLYWLGKRARSPLSLSLLEWYES
                     LRQKLISAQVKLEETQAVPSFQDFANLLKLAEETWGDEYFDEL"
BASE COUNT         5959 a         5543 c         4213 g         6946 t
ORIGIN      
        1 ccgcaccaag ccctgccgca atcattgcat ttgattcggt tgctccctta taccagccta
       61 caataattcg ctcactgtta aggcttgcgg ttaaggttgt gccggtggca taagtgccac
      121 gccagcccat tacaccaata gccggtttat cttcaatcgg ggcagaaacc gattctaaat
      181 ggctacgcaa ggcaagggca ttttcatcat ctgaaaacgg cgaaataatc acgttataat
      241 gcgtaccggc aacactcgcc aacgccggag caattagggc attacgctga ccgttatcaa
      301 acgcacgagc ctcaagggtt aaacctgttg ctgtattgcg tgttgcaagc gtgatttcat
      361 tgctgatttc gccttttgct tttgaggtca gtttaagtgt cgtttcactt tccacacttg
      421 ccaccacagg gctataactc gccgcattaa tcacattaac taaacgagcc acaatcgcct
      481 gtgcttcttc gccttttgcg gctgcaactt cgtaagctgt gccggcaatc gtaatacgca
      541 ccacaccggc ataagttact gtgccggtaa aactaacttg ccctgttgct gcaatacctg
      601 cctcgtggtc ttttaagccc accaccgtta aacggattag cggattattt tggattgctt
      661 ggcgaaccat taaatgagct accgagcctt taccaaataa attttccgcc tccacatcgc
      721 taaaaatctt ttgcggagca gtaaaagcag cctcaccgtt tagcattggt gcaacaatta
      781 gcacctcttg ctcattggtc ggcaaggtgg ttactgcatc tttgttgttg tattcggtca
      841 gcacacttgg tttgcgaata ctgttcggga ttttctcaaa ttcaattttt gacattattt
      901 gccccctgtt tctttagcgg atttggtttc tttgacgaca atcaaatcgc catccgcaat
      961 gcggcgttga tagtaaaggg tgttttcaac ctctactgcc tcttgttcaa tatagtgatg
     1021 cggtcggttt tctaccggca cacgcacccc tttagcggct ttcactttta acatctaatc
     1081 accatcctta aattctgttc taaatgccgt ttcggcattg ttattcgggt caaaaatccg
     1141 attattaaag cccgataaat cgccttgcgg ttcatctagc ttgccttgat actgcttaaa
     1201 gacttgctca ttcggctcaa ccccttcggg gaatctacca tcatcaagca cattgcactc
     1261 gttgtagctg atttcaaact caatagcata agcagagagt ttctctttct tcacttccgc
     1321 attattccaa atcgtgcgga ttcgcttagg ctggataggg tggactaaac cgtctaaagt
     1381 ctggttaatc aataaggttt tcaccgctcc cagcaactga ttaaccccca cctcacgact
     1441 tgttacccca cctaaacgcc cagcagtctg atttcgcatt gagcgagtaa taaccaacac
     1501 cacaaacaca tcagtggctt gatagcgttt acctcttact cccattgatt tcgcctcgaa
     1561 cgccgagcca ccataagaga caagacaagc aggcaaacgg agaacatcta acttctcatc
     1621 gttaatttcc ccggcatacc cagcaacggc atacaccatt ttgcctaagc ccagcgttaa
     1681 acgctcaatc aaagcacgct caattttgct aatcatcgct tatcacgccc ccaaatacgg
     1741 ttgcccccgt taaaaaactg cactgtattt tcgccagtag ccgattcttc ctcattggtt
     1801 tcatcaaccg ctaacgacac tacgccctta gagatgtttt ccagctcttt taagcaaagt
     1861 ttgtagcggt tttccacctc ttcggtcatc gttactaatg atttgctggt taaatgataa
     1921 cgagccaaat cacagcaaat acgctttaaa ttttgcggta cagtctttaa tggcagacgg
     1981 taacgcccac ttaaatagcc atcaatttgg ctggaagagt ccgctaaagc tacttcaaga
     2041 gtcgcttcat caaccacgcc taccatttca cggtcggtta gctcaatgga ttcctgttcg
     2101 ccaattcgca aaacgaaatc atcaaccaac gcatacatta cgcatcgccc tcaacaacag
     2161 gtacaaactc caaataaggg tcgttggcta aggtaataat ttgttcatca ctcaaggctt
     2221 tacgagcaat ttctaccgcc gtttctttat taaaacggta gccacaacgc ccataggtgg
     2281 cttgtgggtg gatagatttg agcttaactt caaaagcaat aggatttatc aaagcaccgt
     2341 catcaggctt agtttcactt tcaggcggtt taggttgttc atccgtttta tcttcaggct
     2401 gttcattcac cttatcttca agcggtgtgt tttcgtttgt gttcaaagct tcattgtcat
     2461 ttttctttgg ttttgccatt ttgctaccct ctcaaaatgg gcgtattgct acgcccaaca
     2521 ttaaacttat tcagcaataa atggattcac taccactttt aacacacctt ttaaggtgtt
     2581 ggttgtgccg tcaattaatt ctgcttcgag taatttgcgt gcagcaaact caagcgaagg
     2641 tggcacaagc aaagtggtcg ggcgaatatt taactgctta tcgccatcgc cttttaaggt
     2701 gcgcattgca gttaatactt tttcaagggt ttcactattt aactcactat cttcaacacg
     2761 gtgaattaac tgccagaaac caaaaccggc attaccacga gcacgcacac cccataaata
     2821 ttggtctttc ataaagacgt ggtctgactc acttggatca aacttcgttt caatttcagg
     2881 tgtagtacgt tcttgccaaa ttaacggctt aatggcttgg ctatcatcta gcacatagaa
     2941 cgcaggctta ccgctggcag agcctgtggt gatattactt tgtgttttac ttgtgccagt
     3001 tccatcaaca ttctgataaa cagggtgatc ggtatcaaag aagttctgcc cgtcatagca
     3061 aagggttgtc ttaccttttt tcaacaaact aaataccaaa tcatcaggta attcagccgc
     3121 actttgtgcc gcttgtttca ccattggggt aaataagccc acttggtcat cttcaatggc
     3181 agtacgaggc acagcaacgg ttgattcaaa taatttattc tcaatcgtca ttccttgtgc
     3241 ttgcatattt ttaatttgac ggtcgcccac ccactcttgc attttcggga attgtcccag
     3301 ccaagcatag gtattagtag cggtgctgga gcttaccttc attgcaaccg ttccccattg
     3361 tggttcaagc acttttaaac cagcactaaa ttctttacga aatgcagtat caagtgcttt
     3421 taataattca gattttttaa acattacttg gattcctctg ttttatattt ttcaatgtaa
     3481 gctgcttcgc ttaaaccaag cgattttgct gctgcaattt ccgcagcaga taacgccact
     3541 ttctccgtac ctttgttcgg gtcttcaccc cccgactgcg tacttgctaa agcggggtta
     3601 ggtgttaccg ttttcaaaaa gtcggataaa gccactaaat cttgcttacc gagcttttcc
     3661 gcccacgctt tttgagccgg caataaccga ccgtcagaaa gagcggtttg aattaacgca
     3721 tcacgctctt tatcgttgat ttgctgtttt aagccgttca gctcggtttg cactgcttgc
     3781 aagtcgctta acgccacaaa cttcgccggg tcagggtgat tcactttggc agagagtgca
     3841 accacttggc ttttctcttt tgccagctcg gtataaacat cacttaacgc caccgggctg
     3901 tcgcctttgg ctttctcaag tgcggtcagt ttttcggtaa tctgctcatc ggtcgcattt
     3961 gccgacaatg caaataattt aattaagagt tctttcattt ttggattttc ctcttcgggg
     4021 gttaaaaatt tggcaaattg gctagacatc gcaaccacct cttgcagatt atgcaaggca
     4081 gggcggttag ttaaggcggc attaagtacc ttaattacca ttccgctgcc gtctgtcaaa
     4141 aacagtggcg agagatagcg ataaacgccg tctttaatct cttgggtcgc ttgtggtgtc
     4201 cacttaacat ccgcaaacaa gccttcgccc gagatatatt ccgccttggt aatccaaccc
     4261 gcagcagggt tgcctttgcc gttctcggcg atgtacaggg tctgatgctc ataatcaatc
     4321 atcagatcaa tcgcagtgtt gttaatatca tcggctaacg catagccatt ctcgtcacct
     4381 acataccaac gtcctccacg cccgtcttga gcctcaaacc aaccaaaagg gaaaagttga
     4441 atacgtccat ttgcctcttg gttgagttta aaactcaatg caatggggtt tagtttgaat
     4501 ttatgcttaa acacaaaaac acctcaaaac aaattaatga ggctaaagaa tagaagattg
     4561 agaaaaaaga gtaacgggga gcaacttcca caagttgcaa attttcagaa aaaaacaacc
     4621 gcttgtattc agcgaggaat gtaacccatt ttaaaacgct ttaaatccgt tttaaaaaat
     4681 tttaaaaaag ttggaatgat aaatcaccat aaaaaaaaca aaaacgccac agagagcgat
     4741 ttaggggcta tctgtggcga ttatcttatc gcttaatcca gcagtttttg ccagtaggct
     4801 tgcacatcgt ccaaaatatc ttgcctgtct tgcgaggtta attgtaaaaa aggtcgggct
     4861 tcaattttta ctttacgccc acgcccagcc ataccaccga attgatgaat agcagcataa
     4921 ggctcatttg tgccaacaat cgccgaatca ttattataat cagcagtaat gctgcccatt
     4981 aaattttccg tatcaactaa cggcgtgcct tgccgatgtt ttatacccag ccatttcggg
     5041 cgaccgccct catcaaaatt ggtcagtacc gccgattcca ttttgccggc aatattccgc
     5101 atcaagtctg ttttatttgc cgttttagca gcaatacggt taagcgtggc aataatttca
     5161 tcaatgccgt ggatttggat ttcaatcatt tttaaccttg caagttgatt tttaaaataa
     5221 acaggggtat attcctttta cggttattag aaaagcggtg ataatctccc tgccgcagcc
     5281 tatttgagat ggcaagtcct gctcaaatga ccgagagcgt gtgtaagtga ccgggagcct
     5341 tacctaataa ccgtattttt caacagcagc ttatccaatt ctttttgtcc aatctccctt
     5401 gttgatacca gaaataattc accaaactct tctaagtatt tcaccacaac aagaatacga
     5461 taatgctcaa agtttcgtat aaagctgaaa tttttgcctt cttgcaaaat atgattaggc
     5521 tgaaaaatta catcaggaat atttgcatac acatcaaacc caaaatcctg cccctcacgg
     5581 ctataaaact gcttaatcag tgtgtcatcc gaaagccata ccgtgccgac tttactgtcg
     5641 attaagcgtt gtgtttcctc acttaaccga ccagcagcaa atttaaagtt ttgattaagg
     5701 gcatttcgca ctttaaccat ctcatcaggc gagagttttt tcgccccatc tttggcaagt
     5761 gccacagcct cttctaactt gttaaacgcc tgcttaaatt caccaccgct catttctgct
     5821 ttggtaaatt ggtaagccag cttttcaggg tataaatcca aattcggctt ataggttaaa
     5881 cgccccacat tataatcaaa acctttatca gccaatcgca ccgtaccatc agccaattta
     5941 aagccaatgg tttcctcttg gttgcctaac ttatctttcg gtcgttttgc cttcactaaa
     6001 aacggctcgc tactgccgac ttcgtcaatc cctttacgct ttaaatcccg ctcacttaac
     6061 gcaatcacgg tacaacggca attaaagccg ttcggcggat aaaaagtcgc ccaaaacgga
     6121 tcgtcataac gataaatctt accctgtaat gcttggtgag cagggcgggt gcgttggtcg
     6181 cctaccgccg aatattgcca ataagggcga ttatccacat tatccatata ccgctgataa
     6241 cgagccgcag aataagcctg ttgcatattg gtacgataaa tcgtattcaa gcggcgaggc
     6301 gtgccgaaat gctcgccggt tttcgggtcg gcaagcagtt tgccatcaat gccacgacta
     6361 atcgtcgtgt ccatacaccc agcctttccg ttcaaattct gccgtaagcg ttttcttcca
     6421 ttcattaaag gatttcccct cacgccgtgc tttttccatc gactcataaa tatcacgggt
     6481 catttcaagg ctagtgagct tgctaatggt ggcggctcgc cccaatgcag aatcaaataa
     6541 ttcctgctta aacactttat tcgcaagcaa cttcttctgc cgtaaaaact caatcgcctg
     6601 cttaggctct agtccaatgg caaaattaac tttctgcatt cgcagcccct aataaatccg
     6661 ccaaaaataa cgcattcgct aaatagcggt cgtgttcttc actcactaaa tcagggtagg
     6721 ctgccgccaa tttttctgct gcctcatcat aagagctaca cgccattacc accgccaccg
     6781 cctttttcgt gatggggtca aattgggcgt taaaatccgg cacggaaaaa gcctcgtctg
     6841 ccaaatcatc taaggcatct tgctctttaa tgcccgtttt ggtttgggcc gacaaagcgt
     6901 gaaccttgcc cccacaaccg cattcgcaag cggtcatttt ttgcggaaaa tttgcggata
     6961 accccaccgc ttgtggcggg gcagaacgcc ctaacaccgc ttcattttct tgagcttcgg
     7021 gaataccgag tttatccatc gcccactgca ccggaatcgg cattccaata tccaccaatt
     7081 tcggcaagct ctcggcaaat aacgccaagt cggcaggctc tttggtatca aactcaaaac
     7141 tcggaatgcg ggttgggtcg atattgccaa aattaatttg cagaaacggc agaataattt
     7201 gttgggtaaa cgtctgcccc agctgtttca cgtccgacac caacaaatca cgccgcactt
     7261 cgttatgcac attgccgagt gcattggtag agcttttgcc gtctgcaccg ctggttaagg
     7321 tttgccccaa aatcaagcgg gcgatagact tctcacacca atccaccatt tgcaaaaacg
     7381 gattattgcc ggctgcaccg cctgcattag cggcgttatg caactcaata ctcatcgact
     7441 ccggcataat tccggcagcg ttgtgtccga tttccgctaa tgcacgttta agcgtttgtt
     7501 tttcgtttgg tgttgcccct gcaccgtatt taccaatgcg gataggcata ccatacagct
     7561 ccaaaaactc ggcaaagtcg tggatagagt agtgtttaaa catatacagc caagccagcg
     7621 agcggaataa attattgcgt gccgcctgtg tggagcggga tttatgcgta tgcaccaccc
     7681 agccaaattc tcgtaatggc tcaccttcgg tattttgtcg ggttttcagc aacagattgt
     7741 cgtgcttatc ccacttaaac cacgattgag gacggtggat aaaggcgttc ggataccaca
     7801 atttaccgtt aaacgcccat tcaatttcga gggcagcaaa accgtgtccc acagcgtcca
     7861 tacagtccat caccaaatct tcaaggttgc cgagctgata aaataactca tcaacctcat
     7921 cacgcagttt ttcttcctgc ggtgtggcat tgcgaggggc aacaatcgcc caatctacgc
     7981 ctaatgcggc acgcttacgg gtttggatat tggcaaaaat agagctgtcc cgctcctcaa
     8041 tatccataaa taattcgtgt tgagcggtaa tatcgccatt ctccgtatct tcaaaaatcg
     8101 ctttcatttt agcaggcgta ataaaattgc tcggatggtc ggagagtacc cgacctgtag
     8161 cggtaatttc ggctaaatcc gtctgcaatt cttgattttt aatcgggttt aaattcggtt
     8221 taatctgctt gttatgcttc tttttgctca taaattttcc ttttcagagc ttagttacgc
     8281 tcaatatagt ccccctcttt agcaaagagg ggagttacat taatgccgcc acttactgcg
     8341 atactcaccg tcaaaatcat ctacactctc ccactcaatc ggggcagagc tgctgagtgc
     8401 atttcgccat aacatttcca acgcatccgg accatcatcg tgatcggctt tcggaaaatg
     8461 gcgaagctgg ctttcaagcg tagattgcga gcggtgcaac aaaatcaaac cgttggcaat
     8521 atgcggttgc aagctctcaa tccgtaacat cttgtcactg ttcggcttgg ttgccgttgc
     8581 cggcaccggc ttaccacgct gggcagaacg cttgaccagt tccgtctgca aaaactcctg
     8641 aaattgcacc gtctccacaa accagcggtg acagttatat tgcgaatgca gtctaatcac
     8701 gtcctcaata attaaatccg gcaatcgttt tttgatttgt gcctcaacaa catagagctt
     8761 gccactctca cgatgatagc caccgaccaa aattgcagat gggtcacggc ttgccccagc
     8821 tttccccatt gaggggtcta acgccccgaa ataaatcagg tcatcaggca gttccgtcca
     8881 atactggata ctgttggcaa aaatcgcatc atcacccgag acagggtcat tttgatactc
     8941 ggagtcaaat gctgagtgcc catcactagc acggattttc atcaagtaga ggatagggcg
     9001 agctaaccaa gagactaacg ctcctttatc catttctgct ttatgctgtt gataaaagag
     9061 atcagacata gtgtcatcgt ccccttcttc cgagaggtat atattttccc attcgtccca
     9121 taacgccata ttgccgggaa agcgtaaaat ggctttaaaa cgaactcgcc gccaaccttt
     9181 tgtatttaaa atacggctaa gcacactgtc ataatgtaga attgtgccga catagataac
     9241 atcaaacttt tcacctgcag caccaagttt taaaactgct tttaaaaccc agttatgcaa
     9301 tttattacgc tgtgcaggtg tttctacgct ttcatcattc tcaatatcat caagtactac
     9361 taaatccgga cgataagctc cgtggcgacg accacgcaat ttttgcccag cccccacagc
     9421 ttcaactttt tgttttttag ccgtcataat gacacctgca cgccaaacct tgccttgtgc
     9481 aacctcgggg aaatcaattc ttaaacgagg gttagattca atttccactt taatagcttc
     9541 aagcatactg tatgcctgtt ctttggtgtc catcgcaata atgatgtatc tttttaaatc
     9601 acggactaaa caccacagcg ggaataattg cgtacaaatc gttgattttg cctcgccacg
     9661 aggggctgca atcgcttggc ggactgactt agaaagatca cttaccgaaa gcggtaaatt
     9721 ctcaaagaga taatgatgca actgtgattt atgttcagac cgcacatagt gtggaaaata
     9781 agcctgcaca aaatactcaa agccgtgaac agggtctaaa accttttgac ggcgttcgct
     9841 aatggcttgt ggtttatcgt cccaaccctc aaaactcgct tcgatatttt gttgtaactg
     9901 tcgccgtaat tcttccagtt ctttttcaaa ttctttgatt ttcataaatt acatacaagc
     9961 tgcgataagc aacaaccagc cccaaccgtc tgtaccgttg agcattagtt ttattgctcc
    10021 gaaaatacaa gcaagttgga caatccaacg gaaagagtaa tgcttatgca ctacagtttg
    10081 ttttttctta gccattactt aaactccttt ttgaattgca cttctagctc atctaacatt
    10141 tctaaaaagt caggcaataa atgcggtttc ttggttttga cgatattcgc catcatctca
    10201 atcgcacgca tagcggttgc cattgcactt gtttcaggca atagtttctt gctcgatgcc
    10261 gtcatcttcg caaacgaatc agccagagca gctaatgcct caaccttagc tgcggttggc
    10321 atttcggtgt tttcctcaag ctccgtcatc aacgtgcggt acttaattaa aaaaccggct
    10381 aacaagcctt gagcgatatt ctcaatacca ccgcttgcca tcgcttgcac atcacgagct
    10441 ttttcccagt tatcaccgtt cttttcagca gccgctttcc aacgccgtgc cgtgccgaat
    10501 gatacccctg cacgttctgc tgccatttcg aggcttaaac ggtcaaacac ataggcttgc
    10561 cgaaccgctt tttgtacttc aacatcgtgt gccatacgcc ctctacattc caaatttcag
    10621 gcgtaacaac tcaaaaccca cagcaacaat gccaccaccc aagccaccgg caactacagc
    10681 atcacggcgg tttttacgtg ccatttcatt cactaaacga ttagtcgctt ggatttcacg
    10741 gtgtaagcgt tcgatttctt cgttttgttt atccacctta tcgtttagct catttaatcc
    10801 acctaaaatc aggtctaatt tttccgaatc ggtttgcttt tgttttttac ggctcattac
    10861 ttatccgcct ttttatcaag tttttggttt acttctttga gcgagtctaa aatatcgtcc
    10921 agcttttcct taatccctct attcacttcg tgggcaagct ctttggattg atatttgctc
    10981 tccatttctg cttttagctc ttttaccgtt tgctcattgc ggttgatacg atcaaatatg
    11041 accttgccta caaacgccac taacggagca actacaaaag agatcagcat ctgaaacagt
    11101 ttttcatcaa tcataacgcc cccttttggc tcgcccgacc gggtgttgat taccttgtgc
    11161 caccgccgca cgcaccacgt tatgcaattc tgcaaggtca ggacggcggc gataaaaacg
    11221 ccattgttgc caacgctgtc tgagtttttt aattaacttc attctggcaa acttcctcat
    11281 aggtcagatt gtgtgcaagc acttggcgtt tcgtttccat tgtgtccgca cggctcgggt
    11341 aaatcagacc gaacgccgtg caacccgttg tcgtcacgga agtaaccgtg ttggtgcaac
    11401 tgctcatcaa tggcactagg ctgaatacgg cgagtttcac taacgtgttt ttgctgaatt
    11461 ttggcatttt taacctctgc atttttttgt tgaatttcga ccgcttgttg ctgcttttcc
    11521 gcctttaatg tagcggtaag tttccgctcc tgctttaatt gccagctttt ataaaaggca
    11581 taggctaaaa ttgtgcttac tacaccaacc acacctgcaa tttgttgagt aatcattctt
    11641 cagcctccct tgagcgttct ttttgtttta acgcacttac cacccctttt gtggctgggc
    11701 tacccaatac acaaatacca gcataagcaa accaccagtc ggaaataaac ggcttatcgt
    11761 aaaggtaggc gtgaattaaa atgcccgata acactaacca gctcataaac tgaataaagc
    11821 cagtggtgct ggctgtgccg tctttattgg taattaaatc aagtaaaaat tgcttcacga
    11881 ttattcctcc accgtgtctt tggcaaaata acgcaaatta cccgccattc ggttaatcca
    11941 acctctacca aaacggtcaa agtgtttgag tttggtgtaa aactcaaggc gttctgcctg
    12001 aaataacaag cccacatccg caaccgaata acgctcaatc gcagccaaag tcactttacc
    12061 gataatgccg tcatcagcca cacctaccgc tcgctgtaac attcggctag cattgcccga
    12121 accgtggttt acacacgcat ctaaaaactg aaaagccaac tcaggcggga actgctcaca
    12181 gttataacgt tgccaaaagg ctttgaggta aatagttttc gcatccgcac ggctcattgc
    12241 acgcatagag ccggtatagc cattcgcacg ggcagtatgg atagtgatac cccaattcgt
    12301 ttcgccaccg gggtctttcg ggtcgttcac ataaccgccc tcgtgtccga taagacggtc
    12361 aaatgcaaga ttaaagtcag caatagttgc cttgtttttg ataggttcag tcataaaaaa
    12421 agcctcttta aattcaatga tgatttaaag agactttaat gatttagagc aacggggagc
    12481 aggcgaaagg attccacact taaaacaagg tagcttgcga aacggtatgc ttacgctgat
    12541 aatatcgtac tgcctcccac gcaacacgat cacacacgct gtatttaggg caaatttgca
    12601 taatcgcaag cctgccactt agccctcctt gctcggttaa ttgacaataa tcggcataaa
    12661 tctgctgatt acgcaacatt cttaatgcgg tttcacaacg tggcaaatag acctcgcaag
    12721 ctcccatata agcctgtaat ttcactgcat catcttgccc taatacctct ttgagcttat
    12781 taaaatagag ttttccgtta gaaaattgga atgaaaagcc accaaaggct ttgattagct
    12841 tttcagttgc cggcaaacca atcacgccca caatttcttt caccgtttcc ggcaaataat
    12901 gttcgacact ttcaaattca gacataaaaa atccccttga ataatttcca cgaaagccat
    12961 tatccaaggg ggttattcaa atctgtaata cttacttaaa aatttttttg caaatttttt
    13021 aaaagctcag cccattttgt gtacggcata tctgatctag ctgcggttga tgacagttct
    13081 gtctcccacc gcattactat tctttgcccg acccctaata tgttagctac ctctgtttgt
    13141 gtgaggttat ggtgctttct tagcattttt aagttgcttg gtgtgtatcc aaactctggg
    13201 ttttcaatca ttcacctccc tccattaaac tagctattaa atacagcaac aacgataggg
    13261 tttctaataa tgctctcgcc tttatcttct ccgcctcttg cactatcgcc tttaactagg
    13321 ataaagtttt gcccacagta tgactggaaa cctttaaatt caacatcaaa ttttttgcaa
    13381 gcatcacgac ctagattttt aatagcattt aacaaacctg cttcatctgc attttggatt
    13441 cccattgtac aaatgccgtc taattcttca tctgtttttt caccatcgac ccaaacaaaa
    13501 gaatttccta attcatcgcc aacttgatgc acatctgtag ttgctcttaa accataaaca
    13561 gcgaagcagt cttcatcggc atcgtttagt aaagcattta aaagtttttg gtaatctgtc
    13621 attttaattt ctcctgtttg gctatgggtg cattatagta atataattac ctattgcaag
    13681 tgatttttcg tttttttctt aaattttttt atgtaaataa aaaagaccgc ttgaaagcgg
    13741 tctaaattta ttttttcttg gttgcagaaa tggattttgc aatggtaaag gcagtttccc
    13801 aagcctgttg attatctgta acctcaattt tacggcaagc aatcgcctcg ttgttaaagt
    13861 cagtcatatc aaccttgtcc gaattaacaa gcaaaataac acggcgtaaa gcacaagcag
    13921 caataggatt gtgatcgtgc ccaaacgaac cagtttccat tccgtaagct acatttctta
    13981 actgttgata atcaccactt acaagagcat ttgctgtttc ttgttcagct ttttctgtca
    14041 ttgctattgc tggtaacgac aataagcata aggttgttaa tagcagttct ttcattttaa
    14101 atacctttaa aagttgatta aaaaacacct aaaatctacc acaaaaaagc ccactattta
    14161 aagtgggcta tgcaataaat ttattattta acactcattc cgtgcctatg gttataactc
    14221 gccaatatct gcactaattt atgcaactga tcatctgtca gccattgcac ccgctcaata
    14281 ccaaacgagc gtttggcaat ggcgtgggcg taatcccacg gcttttggct ttgatacagc
    14341 aacgccccga ttttatttat caacccttgc cggtgagggg cggttttact tgctgttggg
    14401 cgtttaccgt attttttcga cttcaccaca aaccctttag ctttcattgt ttgcagtacg
    14461 gtcattaatt cgctatcggt catcattgag cagcttggtt tatccaccgc ctctaacaac
    14521 agcattttat aggcgttatc atccagtttt agctcatttt tgccgatatg gattttctgt
    14581 atcatctgct ttctagtttg cggttgcatt ttgcttttcc tcctgccatt tcagccaaat
    14641 ttgataactt tcggtgttct taacggcttc cagttgcccc atttgcttca ttcgttccac
    14701 atacatcacg gcatcgtgtt tcttttggtc tgcttgccgt tgctgttgct caaggctact
    14761 cactgctttc gcttcacttc ttactactgc aaattgtggc ttcacgcttt catatacttt
    14821 cttcaagtaa ttatgatttg ccagcggctc acatctgcca gtttcacgcc gattccgtct
    14881 tacttgttcc accgtatcca ttaaggcttt ttctaacaca ttagagggag ggtaaagctc
    14941 caataaactc tgcacaattt tcaaggctcg gctattggca aggctgtttt tctgtggctt
    15001 aaataaccct aaatacgcca ccaccgcacg cccacaattc ccaccgatat tgactatcgt
    15061 atttaacaac tcacgccctg catcatcttc aatcaacgcc tcaaacgaga tgtcggaatg
    15121 gcaaatcggg catttgcata gtttcatcat tctgttcctt cttctattgt ttcgagatca
    15181 acccaataag ttcgactatc agggtatggg ttatgccaag ttgctggagt tagctcgcaa
    15241 ataactaatt gttgtaacac aatctctccc gatttctttt tacataaccg atattcagga
    15301 attttttgat attccatttt atgctcctat aaaacacatt attcagccca cttaaatagg
    15361 ggttaaatgg gctgtaaatg ggttttatta cttcccctgt attgctaaaa actcactttc
    15421 tttaatctca accaatccct ctgcaatctc aggaaatggt tcatcatttt tatcaatagg
    15481 cattggcatt tcaaccagta aggtgttttc acaaatgcct gctacggcta aataacttct
    15541 acctgatgtt ggggaataac taaaatcact tacaaaataa agcatattca aacgttttaa
    15601 gatatagggc gaaaaatcac gatgtttctc ataaatttca ttaattgctt taaaatcttc
    15661 tgcaagttct ttcccttttt cgtaacgttt atcaggtttg acgaggtaaa actcatcatt
    15721 aaatttaccg accttgaacc ctttaacatc taaaacttgg ctaatattgg ttgctttaca
    15781 agcaatccct ataactattc tatgaaacca gcctgaccta ctaattaatc catcattgaa
    15841 aggatatttt tctaaaatag cattgagctt atccttgcgt tcttctttag atacttgata
    15901 atctgcataa atgcttttta gtggctcttg ggttatatcc cctttaaaaa atctaaattt
    15961 cattcttaac tccttactgg ggtggttaat gtttccgatt tgccgttaat aacttcaaat
    16021 gcacctttgg caacaaatcc tgcaccgtgc cgagataaac accactgcga ataaagtcac
    16081 tctgttttaa atatttttgt gcctgaataa tctgcattaa cgcctcgttt aattggctgt
    16141 taagttcgtt tttctcttgt tcggtcatca tctcctccta aaacggtttc ttatgcatac
    16201 gtttacaaaa taccgctcgt tgccccgccc agtctcagtt agcggtcttt tttgctgata
    16261 attttgcaac tttccaatgg tcttgggctt ctgcataatt gcctttacgt tcggcttccg
    16321 ctgctttctc ggcataatgt ttgtagcggt caaactcggt cgccttttgt tctgttttca
    16381 ttttttcctc ctgtggttaa aacactttat aaatgccctt ctatcttgtc cccctctttg
    16441 aaaaagaggg gctaggggag atttttaaag ggcattgaaa aggtttttta actaagactt
    16501 tctttttaac tgatttaaaa tatgcaaatg atttaataac gatgcatatt ctttatcatc
    16561 aaagtccatc attattaatt ttttgttatc acaaaagtgt actgttacat tcccgttaat
    16621 attttctatt gaacaaacct tgtctgtatt aaccacaaca ggtttatccg tataattaac
    16681 attaaaagta ataaacattc taaacccccg ccatatctaa actaatcggc tgatactttc
    16741 cgttttcatc acgtttataa aaacggatat aacctttact accgatcact tgtacgctat
    16801 ctgaaatcgc tgtcattgct tgattccatc ttgcatcatc aatctcaaca cggcggagag
    16861 agagaatttt tgctgtagat aaattacctt ccttatccac ctcaaacgca ttatcaatta
    16921 aggctttaag ctccggtttt gccccttccg accaatcgtg caagcattca tcaatcaagg
    16981 cttttgctgc gtgaatacgc tcatcaaagc gaatattctc ttgcactgct aactgcaact
    17041 tatattcacc gtcataagta aatagtgtga tattgccttt tgcaccgcca atttttactc
    17101 catatttgtc agccgatagg ctgacaaaag cccccacgtc atcaaatacg gattgtttaa
    17161 aatcacctaa cgctttgctt aacgcttgtg ctttgcttac aaattggcga actaattcat
    17221 cacgttcttt gtcgatttct tttactaatg cctccggctt taaattgcca tcagcatctt
    17281 tccagtaaat ttcattaccg attgttactt tactcataat acttcctctc tattccaacc
    17341 cgactttcac ggtgcggatt gctttaccgt tatatttcac tcttttgttg tgagcagggg
    17401 acgacataaa ccgcactgtt ttcgcctcca cccccaaccg ttctgctaac tcttccgccg
    17461 taccgtcagc cacattctct tcgccaacat acagggcata aatcattcgc cgttttttca
    17521 tttctacacc ttcgtaacac gttcagactc ccacacgcat ttcacccccc gcacctgcat
    17581 ttgatagctg tcataccgtc tgccgccttt ggttttcatt ccaaacaggc ttgccaagcc
    17641 gttcttgact aaatcctgtg ttttgcagtt atcccgtaag accaagcggg gtgggctttt
    17701 cgcttcaaac tccactcgtt caacttccaa ctccatcgcc tcacattcca aagtggcaat
    17761 ttctaacttc acaaggctgt cgtggataaa cgcatttaag gggttcatca tttcgcctgc
    17821 tttttcgctg taaacctttt gcataacttg ctccttagct aatcaacatc ttgctatatt
    17881 gctcaaccaa atctttacta attggtgttt ggttaatctc gctagaccgc accacgccac
    17941 gcattaactt acttaatcgg cgggcattgc cgtgacaagc tttaattagc ggggcattaa
    18001 attcatttgt acctaacgca ctttcggcta atagccccaa atcttcctcg ctcaaggcat
    18061 ttcccaaatc acaagcaaaa cctactcggc tataaagctg tgccagctca ttatttttac
    18121 ctttaagatt aaccaacaat ctcggcatac cggctaacac cacgcccacg ctggttaaat
    18181 cgtggattcg gcggataaac tccagcgagc gggtcgaaag taattcagct tcatcaatca
    18241 ttagcaacct ttcagagcct tttaacttgt tcacaatgct ttctaatagt tcgttattta
    18301 cccctctggc atttgccccc accgcctcgg caatcttgcg gagcaagact ttaggtgtgc
    18361 aactcggatc aacctcaatt aatgttgcag agctgtttct gcgttcgtat tctttgagca
    18421 tttgggtttt acctaagccg gctgccccaa aaatcacatt aatttcgcct tcaatatggg
    18481 caaactgcat tacctccatt cctctgcgtg ccgccaaagt tggcacaaaa gcagcgttat
    18541 atttcgcttc caccactttt gccttatcac gctcaatcag ctcgtctact ttgcgatcca
    18601 tttcagccac attgccgtta taatcgcctt tgagatacag actgactgtg gcaacggata
    18661 cacctaaaag ctgtgccact tgtttttgtt gatagccttt gctatccatt aaggctctaa
    18721 gttcttggtt tttcatcgtt tagcctccca ctgctaactt tttttcgtaa tcctcttttt
    18781 ctgctcgggt caaaaaaatc ggttctactt cttttttcgg ttttcttgcc gttgccagca
    18841 agctaaaatc gtttttctgc tcaatggtta aaaccgggtt taattccgca ttaatctcat
    18901 caagctgttg ctgtttaagg ttggctcggc gtttatggcg ttctttacgc tgctgttcta
    18961 ccatcgccac cgggaatgcc tctcgggtgt taccgttcca aattgcctcg caaataaacc
    19021 tgccgtcttt ggtacgcacc tgcacgctct cggcattgtg aatatcaatc ccgatcacca
    19081 cttcttcacg gtcaaaatcc agtaatttca agttaaaata gtggttgtta ttccaactta
    19141 cccaacctcg atccggctta cggataaatt ccggtcggct catatcccgc aactcaatag
    19201 ggcttaacat caccacatct tctgcgtgca acatctgctg atatttgcgt gccggcgtgg
    19261 tacggatttc cgagtgaata tgctcgttgt tgtaccagtc aatcaccgat tggattactt
    19321 caatcaactg ttgccacgtt ggcaatttgc cttgggcttt acgttgtagt ggggttaatt
    19381 cccctttggc atttgccagt gagttcaccg catacagggt tttgcgaacg gtttccggat
    19441 ctgcaccggt tgcatagccg gtttcaaact gtcgggcaat cgtcataccg atggttttat
    19501 ttaagcgttc aataatgcct cgcccctgcg gattgcccgc aatccctgtt tcgtgtcgga
    19561 taccgaggcg gggcaacatc cccgtgattt ccgcatccaa aaatttattc ttttcaccac
    19621 caccgttatc cgagtagtag attgccggca caccgtgtag gctaatggcg tggcgtagtg
    19681 catcagccac cgcaaaggcg ttctcactga gtgccagcga ccagcccacc acttttctac
    19741 cagcaccatc gacaatcatt gtcagctcag gggtaaacgg cttaccgtgt atcgggtggg
    19801 ctactttgag cttcagtgag tgaccgtcac caatccatac atcatttgct cgaagtaccg
    19861 accaatcccg cttcacatag ctcagtaact gcttgtaatg cgagccggtg cgtctgccgt
    19921 actctttcac atacaacggc aacttattca tcgctcgctg tacttggctt aggctggggc
    19981 attgtgccaa cagtagcggg ttgtctgcat actgatacgc ccattccacc tcaaattctc
    20041 ggtaggcttc ggtgaggcaa ataccgtttt tctgccgata tacgcctaaa aaagcactta
    20101 gccaccaaat ttcttccggc ttggtctcct gccgtacctg tggggcaagc agtttcaacc
    20161 gttgctcggc gttctctgcc ttgcagtaat ccaccaccca gccgtttaag gttcgcaccg
    20221 agagtgtgcg ttttgccgtc tttttagcat ttgctacggc aaccagctcc gccaagtgcg
    20281 gtggcatttc gccttgtttg gcaaggttgc aaaggtaggt tatcgcttta atccggctca
    20341 ttgagccttc caactccaac acatacgcca ccagtgccat tcgtgcatca gcaatttctc
    20401 gctgtttggt ggtcaggttt cccacatcca cctctgcacg cactaccggt aactttttcg
    20461 gcttggcttc caccaccgcc gacataaagc gggagcggat ttcggtttga acttcggtgg
    20521 gtaaagagtt aatgtgatat tcaaaaccac ctcctttaac ccctttcaat ggacgagttg
    20581 cccattgttc ttttttggct tgtctagtta catttgttgg gtattttgat aagccactaa
    20641 tacctgctaa ttcttttgca ctaaaccaat ctttcataac agctatcctt gttatgcaac
    20701 atcagggtaa cgactaggcc atatttcggc tggcgttttt cctaatgctt ttgcgataat
    20761 ttcttcaccg tttttataag gtttatcaag agcatttctt actgttgttt tggaaagccc
    20821 attctcaatc cctaactgag aaaatgttat tcctttcttc atcaattcag ctcgaatatc
    20881 agctctatgc atatcttgag ctcttttctt tttattcatt ttgtgagatc ctccacattt
    20941 agtttatttg ctacgcttta gcgtacttga ttaactacag gactaaatat aatacttatt
    21001 cttttctaaa tcaatagtga tttaataaat tttttaaatc ttttttaaat ctatttgtaa
    21061 gctattgatt ttaaataact taatcaattt tgattttaaa atcatttttg attaagaagg
    21121 ggttaattat gaaatcattt gataaagttt ggttttcagc caaagaacta gaagaattgg
    21181 atttgcctga ccttccaaag caagcaacaa acattacaag aaaggcatta aaagaactct
    21241 ggataaaacg tgatgcagtt ggagtaaaag gtggggggaa tgaatatcac ataacttcat
    21301 tgcctcgtaa agcccaagaa gcactcggat ttaaaagtgg aataaatgca atcaaggata
    21361 gcatagtaag agagattaca cctgaagagc aaaacaaagg atctgaatta tcaggcaccg
    21421 ttttgaataa cataatctca atgattgata gttttgcatc tattaaagta tctgcaggct
    21481 ttgggagctt taatgaaggt gtaacaaaac ctgatggaca agagccttat gctgatagct
    21541 tgttgcatac gcttggtgtt aatgccaaga agtgtgctgt tttttgggca agtggagact
    21601 cgatgtatcc gactattgat aatggcgacc agctactagt tgatttaagt cgtaatgaga
    21661 tacgaggcga caataatatt tacattgtac aaaacggcga cagtgtttgg gttaagcgtg
    21721 taaaactgct atgggacggt gtagagctta tttcagacaa ccgagaagag tacgagttaa
    21781 taaagattac agcagaccaa gcccaaaacc tacaaatcat cgggcaagtg gtacacatcg
    21841 ggcattcttt agtttaaaac agatttaaaa tagttttaaa accgatcaaa cctatgcaaa
    21901 aaataacgca aaaactgctc gtttttttct aatcctgctc attttgtttt ttgcatagct
    21961 ccaaccaaac aataacggcg aacccttgta ttcacggggc tcgccgttat ttttccgccc
    22021 aaattttttt ctttctctct atgcaaaaaa gatcagtacc ccacaataaa acagtaattc
    22081 aaacctccag aattagaaca aaagttttac cccacttatt ttaagtgggg ctttttttat
    22141 tttataactc atcaaaatat tcatctcccc aagtctcttc tgctagcttg agtaaatttg
    22201 caaaatcttg gaaagaaggt accgcttgtg tttcttctaa tttgacttgt gccgaaatta
    22261 atttttgtct aagcgactca taccattcca ataatgataa agataacggt gatcttgccc
    22321 gttttccaag ccaatataac ccttgaaacg gaatagaaat ggcgaaaaca gcagtaagta
    22381 ccgaattggc taaaatagat tgggtcggat cggtaaagca atattgccaa actaatgcaa
    22441 agcaagcaaa agcaggcatt actttagagg aaaattttac caagcgaata atgtggtaat
    22501 ctggcataaa attggctaat tttttctgat tcggcagagt gttgaggtaa cgctgtcctg
    22561 catcaaataa gcttaacata ggattatctc tttcaaattt ttcttttatt ttagctaact
    22621 gattaaaatc tacaataggt taatgcagtt tggctcaagc c
//
LOCUS       DANLZQ010000026        22461 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.026, whole genome shotgun sequence.
ACCESSION   DANLZQ010000026 DANLZQ010000000
VERSION     DANLZQ010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 22461)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22461)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22461
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.026"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            247..1794
                     /gene="sbcB"
                     /locus_tag="PXE50_000971"
     CDS             247..1794
                     /gene="sbcB"
                     /locus_tag="PXE50_000971"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease I"
                     /protein_id="HDL5621899.1"
                     /translation="MSDKFSFFFYDYESFGVSPALDRPAQFAGIRTDADFNIIGEPVM
                     FFCKQTPDYLPSPEAVMVTGITPQQCNAEGVSEPEFAARIHAEFSRANTCTIGYNNIR
                     YDDEMTRYTFFRNFYDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPTDETGMPSF
                     KLENLTKANGIAHENAHDAMSDVYATIAMAKLIKQKQPKLFDFFFNLRSKKEVEKLID
                     TGEMTPLVHVSGMLGNYRGNTAWVVPLAWHSTNQNAVIVCDLSGDMNGLLTENAEVLR
                     QRLYTKRDELAENELPVPLKLVHINKCPILAPAKTLLPENAERLGIDRALCLENLKTL
                     KAQKSLIREKVIEIFNEERTFEPSTNVETTLYDGFFSPADKNNMAILRTLPPEDLANH
                     GLKFEDPRVEALLFHYRARHYPQTLSRAEQIKWQKHCNQQIEAKAAQFAQSIDDLFQQ
                     HHDNPEKVKLLENLTAYAEQISQQQAVIYRQNVAKDEKLLSELNRVAEQPLDKTEKLK
                     MLKELIK"
     gene            1791..2390
                     /locus_tag="PXE50_000972"
     CDS             1791..2390
                     /locus_tag="PXE50_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA glycosylase"
                     /protein_id="HDL5621900.1"
                     /translation="MTMDNLPLEQHPFDPILPEQATVVMVGTFPPTSEKRCMEFHYPN
                     FQNDMWRIMGNIFYADPNYFRVGEEKRFDPIRIEAFLREKGVALCSSAKTAIRLKGNA
                     SDKDLKIVDPIDMDELLLKLPKLKWLFTTGGLATDTLLGLLPEKHKAPKTNEWVVYPY
                     SATRELYLYRLPSTSRAYPLSLANKTEAYRQFFRTAGLI"
     gene            2402..3220
                     /locus_tag="PXE50_000973"
     CDS             2402..3220
                     /locus_tag="PXE50_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HDL5621901.1"
                     /translation="MKYDLHAHSTASDGVLSPTELVQRAVEQGVTMLALTDHDTISGI
                     QEAKNFAQNQPLELISGVEISILWQEKSIHLAALNIDENNEELVKFLDNQAQLREERA
                     VEIGEKLAKVGIANAYEGAKALATGEVTRAHYGRFLYEQGYVRNIEHAFKRYLGMGKP
                     AYVKPRWSSLEDAVNVTHTSGGVISIAHPLRYKMTARWIRRLIADFKQAGGDGIEVSG
                     CGQTPDQRQLLARWAKEFDLYGSVGSDFHYPTGWIELGKSLELPQECKPIWTLF"
     gene            complement(3256..3875)
                     /locus_tag="PXE50_000974"
                     /pseudo
     CDS             complement(3256..3875)
                     /locus_tag="PXE50_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596976.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Fe2+/Pb2+ permease"
     gene            complement(3886..5082)
                     /gene="efeB"
                     /locus_tag="PXE50_000975"
     CDS             complement(3886..5082)
                     /gene="efeB"
                     /locus_tag="PXE50_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deferrochelatase/peroxidase EfeB"
                     /protein_id="HDL5621902.1"
                     /translation="MMAETTSRRDFLKHTALVGAGLLSAPAFALESRQISEKSQNQYD
                     FYGKHQAGIVSPAQKHIYFLVLDLDTTDIAKVKTLFQNWTEYSRNLTLGKNVKPYSAN
                     AYVPPADTGEADSLSAQNLTLTFGVSANFFTKLGIEKHKPKELNDLPHFPRDQLQAEY
                     TGGDICIQACADDPQVAFHAVRNLVRVARGEIKMKWSQMGFNSFANQDTPRNLFGFKD
                     GTANAESLKDQENTVWVQQEGWLKGGSYLAVRRVKMFLETWDRTHLQSQEETFGRHRD
                     SGAGIGHQHEFDKLDLAKKDEKGNAVIPEVSHAHLANKTGLKILRRSFSYSSGIDDKG
                     QFDSGLLFVSFQQSPEQFIKIQNALGNVDKMNEYITHIGSGLFACFAGVKDENDYLGK
                     ALFDLI"
     gene            complement(5093..5938)
                     /locus_tag="PXE50_000976"
     CDS             complement(5093..5938)
                     /locus_tag="PXE50_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005823485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EfeM/EfeO family lipoprotein"
                     /protein_id="HDL5621903.1"
                     /translation="MFLLKGNFYAFNQTCFCTFALSGFFVATQAAALDLTKETEAYKQ
                     FVVEQIDQLVTDTEKFVGYLNKGDVQKAKKIYPLARMYFERSEPIAESFGDLDPRIDA
                     RLADLAEEGKTEKDWSGFHKIEKVLWQKNTTKGTKATAEQLLKDVKELRAKIPTAEVT
                     PEPMITGAVDLLNEVSTTKVTGEEEIFSKTDLYDFKANIEGAEKIYEIFKTQLEQIDA
                     KLSTEIGSRFAAVNALLAKHNKSKTGYDYVPYNKLSKADIKALAEAVNQLGEPLAQLG
                     VLLNK"
     gene            6101..6337
                     /locus_tag="PXE50_000977"
     CDS             6101..6337
                     /locus_tag="PXE50_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ParD family
                     antitoxin"
                     /protein_id="HDL5621904.1"
                     /translation="MSRTTSVTLAEPLSQFVNQMVESGRYGSTNEVISAALKILEAQE
                     QQLIQLRALIDEGLESGVSEETVQSIISKAKRNV"
     gene            6576..8594
                     /gene="uvrB"
                     /locus_tag="PXE50_000978"
     CDS             6576..8594
                     /gene="uvrB"
                     /locus_tag="PXE50_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit B"
                     /protein_id="HDL5621905.1"
                     /translation="MSKQGKPFILHSPFKPSGDQPSAIAKLTEGLNDGLAHQTLLGVT
                     GSGKTFTIANVIAKLNRPAMVLAPNKTLAAQLYAEMKAFFPENAVEYFVSYYDYYQPE
                     AYVPASDTFIEKDASINEQIEQMRLSATKSFLERRDTIVVASVSAIYGLGDVDAYMQM
                     MLHLQVGAMIGQREILSRLAELQYTRNDQAFQRSTFRVRGDVIDIYPAESDEVALRVE
                     LFDDEIENLSLFDPLTGHSLGKVPRYTIYPKTHYVTPRERILEAIEQIKVELADRRTY
                     FIKENKLLEEQRIAQRTQFDIEMMNELGYCSGIENYSRYLSGRKEGEAPPTLFDYMPA
                     DGILVIDESHVTVPQIGGMYRGDRARKETLVQYGFRLPSALDNRPLRFEEFERLSPQT
                     IYVSATPGAYELEKNPDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIHKRVAVDER
                     VLVTTLTKKMAEDLTDYLDEHGVRVRYLHSDIDTVERVEIIHDLRMGMFDVLVGINLL
                     REGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLNGKAILYGDRITNSMQKA
                     ITETERRREKQMKYNEEHGITPQALNKKVGELLDIGQSDKPKRGKQAVKKAENSATDY
                     KPKSRKELEKELKTLEQQMRDFAKDLEFEKAAAVRDKLQHLKAYLLEV"
     gene            8597..9007
                     /locus_tag="PXE50_000979"
     CDS             8597..9007
                     /locus_tag="PXE50_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621906.1"
                     /translation="MISRSLFSKLILFAKIVIFSQLVFMVVIWIAHHIMREYSNPFER
                     FGTLFNNVFLTFIIPMMVSSAVIVYKGYTQKNEDKVFWIYMGFFLIWILGFIYFEPAV
                     YDKSLKISGAGFGAMLSIIICSKLLPKETNKEQL"
     gene            complement(9228..10316)
                     /gene="purK"
                     /locus_tag="PXE50_000980"
     CDS             complement(9228..10316)
                     /gene="purK"
                     /locus_tag="PXE50_000980"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HDL5621907.1"
                     /translation="MQKSAIYPPVYVLGNGQLGRMLRYAGAPLDIEVKPLAFDAPVFD
                     IEPNSIITAEIERWADTPLTQLLGNHPNFVNLNVFGKLADRFTQKSLLDELHLATSKW
                     QLLENAEHWQDIFQHIGEKVVVKRRTGGYDGRGQWIVTQDSIHQITPELFGEVIAEKF
                     IPFEGEISIVGARFRDGSTRFYPISHNLQQNGILRYSVSDVNLPNQALYQQQAEQMLA
                     TVMQKLEYVGVMAMECFVVGDKLLINELAPRVHNSGHWTQLGCAISQFELHLRALLDL
                     PTPALDQIAPSVMVNLIGIEHNKQWLSLPFSQLHWYGKEVRAGRKVGHINLTHTDKNG
                     LIELLEQLRPSLTEDFHSGLDWAINKLK"
     gene            complement(10335..11300)
                     /locus_tag="PXE50_000981"
     CDS             complement(10335..11300)
                     /locus_tag="PXE50_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HDL5621908.1"
                     /translation="MSKKLLILHTGGTISMKEGEDGKVSPSNENPLLAALERLNHPAK
                     LAQESLFNIPSPHINIEHWQQLKMRIEKAVNEENVDGVVITHGTDTLEETSYFLDLAL
                     SVNIPVVITGAMRSSNELGADGLINLQSAILVALNEESRDKGVLVVMNDEIHNAKFVT
                     KTHTTNVATFQTPTFGPCGLVTKESVIFFQKLTTYERYPIQQVTKANVQLLKAYAGMD
                     SFLLEQLAKSKCDGVVIEALGAGNLPPSCLAGIEALVNANIPIVIVSRAFNGITQDVY
                     DYVGGGKQLKQKGIIFTKGLSGQKARIKLMVLLSQTLDKPLSDYF"
     gene            complement(11315..11812)
                     /gene="purE"
                     /locus_tag="PXE50_000982"
     CDS             complement(11315..11812)
                     /gene="purE"
                     /locus_tag="PXE50_000982"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HDL5621909.1"
                     /translation="MPNKAEIAIVMGSKSDWATMSEATQILDQFGLSYHVEVVSAHRT
                     PDKLFSFAETAETNGYKVIIAGAGGAAHLPGMIAAKTIVPVLGVPVKSSMLSGVDSLY
                     SIVQMPKGIPVGTLAIGPAGAANAGLLAAQILAAFNPDIAEKLRIFRQTQTQMVLDNP
                     DPRVE"
     gene            11986..12630
                     /gene="sspA"
                     /locus_tag="PXE50_000983"
     CDS             11986..12630
                     /gene="sspA"
                     /locus_tag="PXE50_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stringent starvation protein A"
                     /protein_id="HDL5621910.1"
                     /translation="MTSSINKRSVMTLFSDKNDIYSHQVRIVLAEKGVPYEIENVMLG
                     SISEDLLELNPYGNIPTLVDRELVLFNPRIIMEYLDERFPHPPLMPVYPVSRGQCRLN
                     MYRIEQDWYSQIDIVNKDPESAEGKKALAQLKEDVLALAPIFAAKPYFMSDDFSLVDC
                     YIAPLLWRMQILGVKFSGATAKPINAYMTRVFQRDSFIQSVGGEAPKHLMDDKD"
     gene            12630..13037
                     /locus_tag="PXE50_000984"
     CDS             12630..13037
                     /locus_tag="PXE50_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HDL5621911.1"
                     /translation="MKPLRPYLYNAYYNWIIDSDNTPYLLVNAEFPDVDVPVEFVKEG
                     KIILNISPRSIGQYIVADEYISFSARFQGMLRDIYIPFGAMVAIYAQETGDGIMFQEE
                     AYYTEEAYQARVRAVEQPKKIKAKKTSTLKLVK"
     gene            13234..14193
                     /locus_tag="PXE50_000985"
     CDS             13234..14193
                     /locus_tag="PXE50_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5621912.1"
                     /translation="MKFHKTLLVTLLSSLSVAALAQDKIQNVAITAIVEHPALDSIRK
                     GVIEELAREGFVDGKNIKIDYQSAQGSTATAAQIARKFVGDKADIIIPITTPSAQPVV
                     AATRSIPIVFSGVTDPVAAKLVKSWEPSGTNVTGISDHKAMAPQVKLIQTLVPDLKAV
                     GYVYSAGEVNSAIVLEELKQEAQKQGFTIVPVAVQRSADIGTAARSLNGKVQAIYISE
                     DNAVVSAYEALHKAALEAKIPVIAADRDTVQRGAVAAYAVNQYDIGVATGKVAARVLK
                     GEKAGTIPIQEVSKLELSINTKTAKELGITIPEVLIKEAKQTF"
     gene            14273..14533
                     /locus_tag="PXE50_000986"
     CDS             14273..14533
                     /locus_tag="PXE50_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005718542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HDL5621913.1"
                     /translation="MGWIAAIIVGAIIGWIASAVMKSEGGLCKNIIIGILGSSLGRWV
                     FGDVLGIGSAYSAGDFNIVGIFFGVLGAALLIFILRKLSIIN"
     gene            complement(14583..15473)
                     /locus_tag="PXE50_000987"
     CDS             complement(14583..15473)
                     /locus_tag="PXE50_000987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL5621914.1"
                     /translation="MDKLNAISLFCKVIETQSFTQAAQQAQISLPMASKLVAQLEEHL
                     NVRLLQRTTRKITPTEAGLLYYQQCLPILNELKEADASVSNINSTLQGKITMSVPMDF
                     GSRFIAPYLGKFMEDYPNLALHIEFSDRRVDVIAEGFDLVLRIGSLADSSIVAKKIAD
                     SHLVLVASPDYLARFGEPKGLEALVERDCLLYEYHPQWQFSQQGQKMQIKPQGKIYSN
                     NGYALVQMAKAGLGIINIPKFLIKHELKNGELIPIMPFLTQEPLQISLLYPNRRYLSP
                     KVRILIDFFTQLMQEQKEYI"
     gene            15603..18209
                     /gene="topA"
                     /locus_tag="PXE50_000988"
     CDS             15603..18209
                     /gene="topA"
                     /locus_tag="PXE50_000988"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000513593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HDL5621915.1"
                     /translation="MGKSLVIVESPAKAKKINQYLGSNYVVKSSVGHIRDLPKSGSDE
                     KTEKAKPISTKGLTAAEKAKIKAEKERVALVKRMGIDPYNGWKANYQILPDKEKVVSE
                     LKSLAKKADHIYLATDLDREGEAIAWHLREIIGGDDSRFSRVVFNEITKDAIKKAFDD
                     PQPLNIDRVNSQQTRRFLDRVVGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREI
                     KAFQSEEFWTILANTQINRKKLPLELTTYKGKKFSASNEAEANVAVRALEQSDFIVSN
                     IEAKETSSRAAAPFITSSLQRAASTRLGFGVKKTMMLAQRLYEAGYITYMRTDSTNLS
                     REALAMARGYIQDNFGANYLPEKANVYRSKDNAQEAHEAIRPSDVNVKMADLKGMDKD
                     AERLYDLIWRRFLACQMLPARYDSTAVTVSAGDYELKANGRVLRFDGWTKVLPVQGKN
                     PEDQELPAVELHQKLTLDEIVPSQHFTKPPARFNEASLVAELEERKIGRPSTYASIIS
                     TIQERGYVRTENKRFYVEKIGEVVTDRLNESFKDLMNYDFTANMEEVLDQIAEGSKNW
                     KEELNTFFKHFSEELSQAELDELEGGMKPNSLVPTDIDCPTCGRKMAIRTASTGVFLG
                     CTGYALPPKERCKTTMNLIPEAEFFNVLDSDSETKALMARKRCPKCDSAMDSYVIDAE
                     RKLHVCGNNPNCDGHIIEQGSFKIKGYDGPVVECDKCGSDMHLKLGRFGKYMGCTSCD
                     NTRKILKNGEVAPPKEDPIAFPELKCEKADAYFVLRDGASGVFMSAHNFPKVRESRAP
                     KVVELAQYRERLPEKLQYLADAPQQDPEGNEAIIRFSRKEKRQYVTSEKNGKATKWIV
                     DYLDGKWVERKK"
     gene            complement(18259..19197)
                     /gene="yvcK"
                     /locus_tag="PXE50_000989"
     CDS             complement(18259..19197)
                     /gene="yvcK"
                     /locus_tag="PXE50_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine diphosphate-N-acetylglucosamine-binding
                     protein YvcK"
                     /protein_id="HDL5621916.1"
                     /translation="MENTDIIPFKPTRHHYLNQLNAVVALGGGHGLGRLLSALSFLKE
                     RLTGIVATTDNGGSTGRIRSQQGVIAWGDLRNCLNQIIVKPTIASRLFEYRFAGTGEL
                     AGHNLGNLILTALENMQIRPLEGINLVRELLHVRSQLIPMSEIPVHLIAQLHSGESVF
                     GEVQIDSLAETPQHLALDTMVVATPEAISAIQSAELILLGPGSFFTSIMPNLLVAGIA
                     NSIAQSKARVVFIDNIGQEHGPAGQLSLNQRIEWMENCIGQARINAVITTDDAGSELP
                     EHIQILRKNLSANDVYYRHDRNKLSKAIDELLAQNI"
     gene            complement(19211..20287)
                     /locus_tag="PXE50_000990"
     CDS             complement(19211..20287)
                     /locus_tag="PXE50_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDL5621917.1"
                     /translation="MFQMLQDWYRKKFTDPQIVVLFSILLIGFGIIYFFSDLLMPLLV
                     ALVFAYLLEWPIRFLSSKLKLPRTLSVILVLGGFIALLSFLGVVLLPSLWNQAVTFIQ
                     DLPSMFNLLNAWLQALPEHYPELVDYATLDSIVNTAKSNILSMGESLLTLSINSIISL
                     VGLGIYTFLVPLMVFFLLKDKIVLMRSFSKVLPQNRRLATRVWFEMQQQIANYIRGKF
                     LEILIVGVVTYIIFLFFDLRYPLLLSVAVGISVLVPYIGAVLVSIPVMLIALFQFGLS
                     PDFYYLMLAFIISQLLDGNLLVPFLFSEAVNLHPLTIIIAVLIFGGLWGFWGVFFAIP
                     LATLVKAVLQALPSAQSDAIILEK"
     gene            complement(20318..21073)
                     /locus_tag="PXE50_000991"
     CDS             complement(20318..21073)
                     /locus_tag="PXE50_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDL5621918.1"
                     /translation="MKKEEVGHHFLARLGKTRLRPGGKLATDWLIANGDFDKNKKVLE
                     VACNMGTTAIQLAQQFECQIVGIDLDEDALEKARKNIKENHVEHLIQVQRANATKLPF
                     DDESFDIVINEAMLTMLPLEAKEKAIREYFRVLKPNGFLLTHDIVIQDKDSDTLLAEL
                     RDAINITVSPLAKADWKSLFQRCGFRNVDTFSGEMSLLSPKGLIHDEGVLGAMKIIGN
                     ALKPENRETFNKMYKLFNDPDKKLGFIAVCSQK"
     gene            21225..21434
                     /locus_tag="PXE50_000992"
     CDS             21225..21434
                     /locus_tag="PXE50_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome alternative rescue factor ArfA"
                     /protein_id="HDL5621919.1"
                     /translation="MSKQKNDYLHQRGQIKESAVKALVTDPLFRQRVERNRKGKGSYR
                     RQEKHKKTIYGQKETPFKNIRLESF"
     gene            complement(21483..22205)
                     /gene="bioD"
                     /locus_tag="PXE50_000993"
     CDS             complement(21483..22205)
                     /gene="bioD"
                     /locus_tag="PXE50_000993"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HDL5621920.1"
                     /translation="MPSLFITGTDTNVGKTVVTRAIIQTLTKHSFPVIGYKPIACGGD
                     DSLPTEPTQYDYATEDNSDVLTILDSCPTNVSYRDINSYTFIHSSTPVFAALDAVHHI
                     QLEKLNTDLKRLENAYPNVVVEGTYGWLTPINKDYYFADWVMQNNMPVVLVVGIKEGC
                     VNHALLTANEILQRGVKLVSWVANRVNPGLRHYHELIELLTQKINAPLLGQIPYMGHP
                     EHKELSSYIQNPEPLLAYFSKP"
BASE COUNT         6649 a         4343 c         4817 g         6652 t
ORIGIN      
        1 gttaaaaaat tttttatttt ttaatgaact ttcgttcagt taggcagtct gagtatatgt
       61 aacagattta tgcaagtttt tttcatattt ccttaggtaa gacctccgcc ccttttcgct
      121 tttttgatta ggggcttttt ttattttagc atttgcaaat ttctaacgga aattgaccgc
      181 ttgtattccc tcctttctgc cttactgtgc tacaatcagc ccaatttttt ctaacaaatt
      241 gaacgaatga gcgataaatt ctcttttttc ttttacgatt atgaaagttt cggcgtgagt
      301 ccggcgttag atcgtccggc acaatttgcc ggtattcgaa ccgatgcgga ttttaatatt
      361 atcggtgaac cggtaatgtt tttttgtaag caaacgccgg attatttacc cagccccgaa
      421 gcggtgatgg ttaccgggat tacaccgcaa caatgtaacg ctgaaggtgt atctgagccg
      481 gaatttgcag cccgaattca cgctgaattt agccgagcga atacttgtac tatcggttat
      541 aacaatattc gttatgatga tgagatgacc cgttatacct tcttccgcaa tttttacgat
      601 ccttacgaat atagctggaa aaacggaaat tctcgttggg acttgttaga tttagtccgt
      661 gcctgttatg cgttaagacc tgatggtatt gaatggccaa cagatgaaac cggtatgcca
      721 agttttaaat tggaaaacct caccaaagcc aatggcattg cccatgaaaa tgcacacgat
      781 gcgatgtctg atgtgtatgc caccatcgca atggcaaaat taattaagca aaaacagcca
      841 aagttgttcg attttttctt taatttacgc agtaaaaaag aagtagagaa gttaattgac
      901 actggtgaaa tgacaccgct tgtgcacgtt tccggtatgc tgggcaacta tcgaggaaat
      961 accgcttggg ttgtgccact ggcttggcac tcaactaatc aaaatgccgt aattgtgtgt
     1021 gatttatcgg gcgatatgaa tggcttattg actgaaaatg cagaggtttt acgtcagcgt
     1081 ttatacacca aacgagatga attagccgaa aatgagttac ctgtgccgtt aaaattagtg
     1141 catattaata aatgcccgat tttagcaccg gcaaaaacct tactgcctga aaatgcagaa
     1201 cgtttaggca tagacagagc tttatgtttg gaaaatttga aaactttaaa agcacagaaa
     1261 tcgctgattc gggaaaaagt gattgaaatt tttaatgaag aacgcacgtt tgagccttcg
     1321 accaatgtag aaaccacttt gtatgacggc tttttctcgc ctgcggataa aaataatatg
     1381 gcgattttac gcacgctacc gcctgaagat ttagccaacc acggcttgaa atttgaagac
     1441 cctcgagtag aggcgttact attccattac cgagcaaggc actatccaca aacactcagt
     1501 cgagccgagc agatcaaatg gcagaaacat tgcaaccagc aaattgaggc aaaagcagcg
     1561 cagttcgccc aatcgattga cgacttgttc caacaacatc acgacaaccc ggaaaaggta
     1621 aaattattag aaaatttgac cgcttacgcc gagcagattt cgcaacaaca agcggtcatt
     1681 tatcgtcaaa atgttgcaaa agatgaaaaa ttgctgagcg agcttaacag agtagcggaa
     1741 cagcccctag ataaaaccga aaagctcaag atgttaaaag agttgattaa atgacaatgg
     1801 ataatttacc gctagaacag cacccgtttg accctatttt acctgaacaa gcaacggtgg
     1861 taatggtcgg cacttttcca cctacatcgg aaaagcgttg tatggaattt cattacccga
     1921 attttcaaaa tgatatgtgg cgaattatgg gcaatatttt ttatgctgac cctaactatt
     1981 ttcgagttgg tgaagaaaaa cgctttgatc cgattcggat tgaggcgttt ttgcgagaaa
     2041 agggcgttgc gctctgttct tcggcaaaaa cagcgattcg tttaaaagga aacgcttcag
     2101 ataaagattt aaaaattgtt gatcctatcg atatggacga actgttgctc aaattaccca
     2161 aactgaaatg gctatttacc acaggtggtt tggcaaccga tacgttgctc ggtttattgc
     2221 cggaaaaaca caaagctccg aaaaccaacg aatgggtggt ctatccttat tccgccacaa
     2281 gagaacttta tttatatcgc ctgccttcga cgtcgagggc ttatccactc agcttagcca
     2341 acaaaaccga agcctatcgc caatttttca ggactgccgg cttaatttaa ggataaataa
     2401 aatgaaatat gatttacacg cccacagtac cgcctctgat ggcgtacttt ctcccactga
     2461 attggtacaa cgtgcggtag agcaaggggt aacaatgcta gctttaactg atcacgatac
     2521 gatttcgggc attcaagaag cgaaaaattt tgcccaaaat caaccgcttg agcttatctc
     2581 tggggtggaa atttcgattt tatggcaaga aaaaagtatt catcttgcgg cgttgaatat
     2641 tgatgaaaac aacgaggagc tggtgaagtt tttggataac caagcccaat taagggaaga
     2701 gagagcggtc gaaattggtg aaaaattagc aaaagtcggg attgcaaatg cctatgaggg
     2761 ggcaaaagcg ttggcaacag gggaagtaac tcgggcacat tatgggcgtt ttttgtatga
     2821 acaaggctat gtccgcaata ttgaacacgc ctttaagcgt tatctgggaa tggggaaacc
     2881 tgcctatgtg aaaccgagat ggagtagttt agaagacgcg gtgaatgtta cccacacctc
     2941 aggcggtgtg atttcgattg ctcacccgct acgctataaa atgactgctc gttggattcg
     3001 ccgtttaatc gcagatttca aacaagccgg aggcgatggc attgaagtat caggctgcgg
     3061 acaaacacct gatcaacggc aattacttgc ccgttgggca aaagagtttg atttatatgg
     3121 ctcggtcggt tctgatttcc actacccaac tggctggatt gagctcggta aaagtttgga
     3181 attaccccaa gaatgtaaac cgatttggac gttattttag tgttatcggg gcaaataatt
     3241 tgccccgatt ttttactatt tcactttaac ttgcttaaag tctgccatta ccacacctag
     3301 ttcggaaacc agttcactga tttttgccat atccggcttt tcagcgttca gattaattcg
     3361 cattaaacca agaatacgct caaatttgcc ataatgggga agactgattt cccgtactgc
     3421 tttttcctgt tttacccaat tcttaccaaa ctgataagcc gcccatttga ttttggcgat
     3481 ttcttgagtt ggcacggttt gagcaagttc tgcataaagc ggcgtcattt ttgccacaaa
     3541 atcctgatgt ttttcagcat aaccgctagg gttttgttct ttttcaaacg catagagttt
     3601 ttagaaaggc tctctaagtt ttcagcattg ggtgtttcaa tcgctttttt cagagcggtc
     3661 tgtacttcaa ctccggcgag ggaatcgtgc tggctaatct gctcaaaatc gtgctgtaaa
     3721 gcggtcaaat tttggctgga ttttgcaaat tccccttttt tactctctgc cattgcatcg
     3781 gaaagctgaa caaataaggg gctgacattc actttggcaa gcaatcctgt actcgaaaag
     3841 agtaacggaa ttagcactaa tgcttttaat ttcatttcct tttccctaaa ttaaatcaaa
     3901 caacgctttg ccaaggtagt cattttcatc tttcacaccg gcaaaacagg caaataaacc
     3961 actgccgata tgagtgatgt attcattcat tttatccaca ttgccgagag cgttctggat
     4021 tttgataaat tgctccggac tttgttggaa agagacaaac aacaaccctg aatcaaattg
     4081 ccctttatca tcaataccgc ttgaatagga gaatgaacgg cgtaggattt tcagccccgt
     4141 tttattggca agatgagcgt gtgaaacttc cggaattact gcattgcctt tttcgtcttt
     4201 tttggctaaa tctaatttat caaattcgtg ctgatgcccg attccggctc cggaatcacg
     4261 gtgacgaccg aaggtttctt cttgggattg gagatgggtg cgatcccaag tttccaagaa
     4321 cattttaaca cggcgaacgg ctaaataaga accgcctttg agccagccct cttgttgcac
     4381 ccataccgta ttttcctgat cttttaaact ttctgcgttg gcagtgccgt ctttaaaacc
     4441 gaataagtta cgaggtgtgt cttgattggc aaaggagtta aaccccattt gcgaccattt
     4501 cattttgatt tcaccacggg caacacgcac caaattacgc acagcgtgga aagccacttg
     4561 cggatcgtct gcacaggctt gaatgcaaat atcgccaccg gtgtattctg cttgtagttg
     4621 atcacgaggg aaatgcggta aatcattcag ttctttcggc ttatgttttt caatgccgag
     4681 ctttgtaaag aaattggcac tgacgccaaa agtaagagtg agattctgtg ccgaaaggct
     4741 atctgcctca ccggtatccg ccggtggaac ataagcatta gcactataag gtttcacatt
     4801 tttgccaagc gtgaggttac ggctatattc cgtccagttt tgaaacaatg tttttacttt
     4861 ggcaatgtca gtggtgtcta aatccagcac taaaaagtag atatgttttt gtgcagggct
     4921 aacaatacca gcttgatgtt tgccgtaaaa gtcgtattga ttttgagatt tttcagatat
     4981 ttgtcgtgat tccaaagcga aagcaggagc agacaataag cctgctccta ctaatgcggt
     5041 atgttttaaa aaatcacggc gagaagtggt ttctgccatc atttttgctc cactatttat
     5101 ttaaaagtac gccaagttga gctaacggct cgcctaattg gtttacagcc tctgctaacg
     5161 ctttaatatc cgcttttgac agtttgttat aaggcacata atcataaccg gttttagatt
     5221 tattgtgttt tgctaacagc gcattgacag ccgcaaaacg agagccgatt tctgttgaga
     5281 gtttggcatc aatttgctct aattgcgttt taaaaatctc atagattttt tctgcacctt
     5341 caatattggc tttaaaatcg taaaggtcgg ttttagagaa aatttcttct tcaccggtta
     5401 ctttagtagt agaaacttcg tttaataaat ctaccgcacc ggtaatcatc ggctcagggg
     5461 taacttctgc agtgggaatt ttcgcacgca gctcttttac atcttttaat aattgttctg
     5521 ccgttgcttt tgtgccttta gtggtgtttt tctgccacaa tactttctcg attttatgga
     5581 aacctgacca atctttctcg gttttacctt cttcggctaa atctgccaga cgggcatcaa
     5641 tacgagggtc taaatcgcca aaactttctg caatcggttc agaacgttca aaatacattc
     5701 ttgcaagcgg gtaaattttc ttcgcttttt gcacatcgcc tttgtttaag tagccgacaa
     5761 atttttccgt atcggtaacc agttggtcaa tctgttctac cacaaattgt ttataagcct
     5821 cggtttcctt agttaagtct aaagctgccg cttgagtagc cacaaaaaag ccagaaagtg
     5881 caaaagtgca aaagcaagtt tggttaaacg catagaaatt tccttttaat aaaaatattg
     5941 cgacataata tccttattgc gaattattcg caaaaaataa tgctgatttt gtgatgtaaa
     6001 tcacattttg ttttgcaaat tattgctaaa aatagaccgc ttgcttatct aaattagagc
     6061 cattacaatc tgctcaataa tcaataagat aggaatagta atgagtagaa caaccagcgt
     6121 aactttagct gagccattaa gccaatttgt gaaccaaatg gttgaaagtg ggcgttatgg
     6181 ttcgaccaac gaggtcatca gtgccgcatt aaaaatattg gaagcacaag aacagcaact
     6241 aattcagcta agagccttaa ttgatgaagg cttagaaagc ggtgtttctg aggaaaccgt
     6301 tcaatctatt atcagcaagg caaaacgtaa tgtataaact ttctgttagg gcagagcgag
     6361 atttagcgtt actttattcg ccctttgtta cgctgtcatt accaccgctc acattctatt
     6421 tattataaac caatcccaaa aggtatcttt attgttaggg tgttagatcc aagaatggat
     6481 caatataagc agttacaata aatttgcaaa aatcccgata aaaacgaccg cttgcttgtg
     6541 ctaaaataaa ccgatttttt aagacaggat tttctatgag caagcaaggc aaacccttta
     6601 tcctccattc tcctttcaag ccctccggcg accaaccaag tgcgattgcc aaattgaccg
     6661 aaggcttaaa tgacggcttg gcacatcaaa ccttacttgg cgtaaccggc tcggggaaaa
     6721 cctttaccat tgctaatgtg attgccaagc tcaatcgccc ggcgatggtg cttgccccga
     6781 ataaaaccct tgccgcccag ctttatgccg agatgaaagc gttctttccg gaaaatgcgg
     6841 tggagtattt cgtctcttac tatgattact accagcccga agcctatgtg ccggcaagcg
     6901 atacctttat cgagaaagat gcctctatca atgagcagat cgagcaaatg cgactttccg
     6961 caaccaaatc ctttttggaa cgccgagata cgattgtagt ggcgtccgtt tctgccattt
     7021 acggcttggg tgatgtggac gcttatatgc agatgatgtt gcatttgcaa gtgggggcga
     7081 tgattgggca gcgtgaaatt ctctctcgcc ttgccgaatt gcaatatact cgcaacgatc
     7141 aggcgttcca acgttcgact ttccgagtgc ggggcgatgt gattgatatt taccctgccg
     7201 aaagcgatga agtagcgtta agggtagagc tgtttgacga tgaaatcgaa aatctgtcgc
     7261 tgtttgatcc gcttacaggg catagcttgg gcaaggtgcc tcgctatacc atttacccga
     7321 aaactcacta tgtgacccct cgggaacgga ttttggaggc aatcgagcaa attaaggtcg
     7381 agcttgccga ccgtcgcacc tatttcatca aagagaataa attgctggaa gagcagcgga
     7441 tcgcccaacg tacgcagttt gatattgaga tgatgaacga gctgggctac tgttcgggca
     7501 ttgaaaacta ctcacgctat ctctcgggca gaaaagaggg cgaagcccct ccgaccctgt
     7561 ttgattatat gccggcggac ggtattttgg tgattgatga aagccacgtt actgtgccac
     7621 aaattggcgg aatgtatcga ggcgaccgag cgagaaaaga aacattggtg caatacggtt
     7681 tccgtctgcc gtctgcactg gataaccgcc cgttgagatt tgaagagttt gaacgtcttt
     7741 caccacagac gatttacgtt tctgccacac cgggggcgta tgaattggag aaaaatcccg
     7801 atgtggtgga tcaagtagtt cgtccaaccg gcttgctcga tccgattatc gaagttcgcc
     7861 ccgttgctac gcaggtggac gatttactgt ctgaaattca caaacgagtg gcggtggacg
     7921 aacgggtgct ggtgacaaca ctcaccaaaa aaatggcgga agatctcacc gattatttgg
     7981 acgaacatgg cgtacgagtt cgttatctac atagcgacat tgacacggtg gaacgggtcg
     8041 aaattatcca cgatttacga atgggaatgt ttgatgtgct ggtggggatc aacttattgc
     8101 gtgagggctt agatatgccc gaagtgtcgc tggttgccat tcttgatgcg gataaagagg
     8161 gatttttacg ttccgaacgc tcgttaattc agaccatcgg acgtgccgcc cgaaacctca
     8221 acggaaaagc gattttatac ggcgaccgca ttaccaactc aatgcaaaaa gcaattactg
     8281 agaccgaacg ccgccgtgaa aagcagatga aatacaacga agaacacggc atcacgccac
     8341 aagcgttgaa caaaaaagtg ggtgaattgc tcgacatcgg acaatccgac aagccaaaac
     8401 ggggcaaaca agcggtcaaa aaagccgaaa attctgcaac cgactacaag ccgaaatccc
     8461 gtaaagaact ggaaaaagag cttaaaacgc tggaacaaca aatgcgtgat tttgcgaaag
     8521 atctggaatt tgaaaaagcg gctgcggtaa gggataagtt gcagcattta aaggcgtatt
     8581 tgttggaggt ttaaatatga tttctcgttc attattttca aaattaatct tatttgccaa
     8641 aattgttatt ttctctcaac ttgtttttat ggtggttatc tggattgccc accatattat
     8701 gcgggagtac agtaatccgt ttgaacgatt tggtaccctg ttcaataatg tgtttttgac
     8761 ttttattatt ccgatgatgg taagtagtgc ggttattgtt tataaaggtt atacccagaa
     8821 aaatgaagat aaagtgtttt ggatttatat ggggttcttt ttaatttgga ttttgggatt
     8881 tatttatttt gagccggcag tttatgataa atcactgaag atttcaggtg caggatttgg
     8941 ggctatgctc tctattatca tttgctcgaa gttattgcct aaggaaacaa ataaagagca
     9001 gctctaagat tcttgtgaag aaatctgttt tctcggagga agaaaatgct ttttgatagc
     9061 catatccacc ctgaggggtt ttcagatcaa gatgatgacc ggaagtagcc attatgttga
     9121 attattttgc aaattttagc actaagtcga ccgcttgttt ggtacgagcg aggaagctcg
     9181 caccatcggg taaacagatt tgcaaaaaag ttacaaaatc cgaccgctta cttgagctta
     9241 ttgattgccc aatctaatcc cgaatggaaa tcttccgtta ggctcggtct gagttgttcc
     9301 agtagttcaa ttaagccgtt tttatcggtg tgagtgaggt tgatatgccc aacttttcta
     9361 ccagctcgga cttctttgcc ataccaatgt agttggctaa atgggaggct tagccactgc
     9421 ttgttatgtt caatgcctat taaattaacc atcacgcttg gggcaatttg gtcgagtgct
     9481 ggcgtaggta gatctaataa tgcccgtaaa tgtaactcaa attggctaat ggcacagccg
     9541 agttgtgtcc agtgtccgct gttatgcact cgaggggcaa gctcgttgat gagtagcttg
     9601 tcgcccacaa caaagcattc cattgccatt acgccgacat actctaattt ttgcattacc
     9661 gtagcgagca tctgttcggc ttgctgctgg tagagggctt ggttcggtaa attcacatcg
     9721 gagacggagt aacgtagaat gccgttttgt tgtaaattgt gagaaatagg gtagaaacgg
     9781 gttgagccgt cacggaatct cgccccaaca atggaaattt ccccctcaaa cgggataaat
     9841 ttttcggcaa tcacttcgcc aaataattca ggtgtaattt gatgaatcga gtcttgcgtt
     9901 acaatccatt gcccacgtcc gtcatatcct ccggttcggc gtttaaccac tactttttcg
     9961 ccaatatgct gaaaaatatc ttgccaatgt tcggcatttt ctagcagttg ccattttgaa
    10021 gtcgcaagat ggagttcatc aagtagtgat ttttgcgtaa aacgatcggc taacttccca
    10081 aaaacattca ggttcacaaa attcgggtgg ttaccgagta attgcgttaa aggcgtatct
    10141 gcccaacgtt cgatttctgc ggtaataatg ctgtttggct caatatcaaa cacaggggca
    10201 tcgaaagcca gcggtttgac ttcaatatca agtggtgctc cggcgtagcg tagcattctc
    10261 ccgagctggc cgttgcctaa tacatacaca ggtgggtaga ttgcactttt ttgcatcgtg
    10321 gtattctcaa tgggttagaa atagtctgat agtggtttgt ctaaggtttg gctgagtaag
    10381 accataagtt taatgcgagc tttttgccca cttaagcctt tggtaaaaat aatgcctttt
    10441 tgctttaact gttttccacc gcctacataa tcatagacat cttgggtaat accattgaat
    10501 gcccgagaaa caattacaat tggaatattg gcattcacta aagcctcaat accagccaga
    10561 caactagggg gtaaattacc tgcacccaat gcctcaatca caacaccatc gcatttgctt
    10621 ttcgctaatt gttccagcag aaaactatcc attccggcgt atgctttcag tagttgcacg
    10681 ttagctttag ttacttgttg aattggataa cgttcgtaag tggtcaattt ttggaaaaaa
    10741 atgacagatt ctttcgttac taagccacaa ggcccaaagg ttggggtttg gaaagtcgcc
    10801 acattagtgg tgtgggtttt ggtcacaaat ttagcattgt ggatttcatc attcatcacc
    10861 actaacacgc ctttatctcg gctttcttca tttaacgcca ctaaaatcgc actttgtaga
    10921 ttgattaagc catcagcacc cagttcgtta ctggaacgca ttgctccggt aattactacc
    10981 ggtatattta cgctgagggc taaatccaga aaataggagg tttcttccaa ggtatctgtg
    11041 ccgtgggtga ttactacgcc atcgacattc tcctcattca ctgccttttc aatccgcatt
    11101 tttaactgtt gccaatgctc gatattgata tgcggagagg gaatattaaa taacgattct
    11161 tgcgccaatt ttgctgggtg gtttaaacgt tctaaggcag ccaagagagg attttcattg
    11221 gaaggggaga ccttaccgtc ttccccttct ttcattgaaa tagtaccacc agtgtggagg
    11281 attaataatt ttttagacat cttttataca atagttattc aacacgagga tcaggattat
    11341 ctaataccat ctgagtttgg gtttgacgga aaatacgcag tttctctgca atatcagggt
    11401 taaaggctgc taaaatttga gcggctaata agcctgcatt tgctgcacct gccggcccga
    11461 ttgcgagcgt accgaccgga atacctttcg gcatttgcac aatcgaatag aggctatcta
    11521 caccacttaa cattgagctt tttaccggca cacctaacac cggcacaatg gttttagcag
    11581 cgatcattcc gggcaagtga gctgcaccgc cggctccggc aataatcact ttatagccgt
    11641 tagtctctgc agtttcagca aaagaaaaga gtttgtccgg tgtgcggtgt gctgagacga
    11701 cttcaacgtg atagctcaaa ccgaactggt ctaatatttg ggttgcttca gacattgtag
    11761 cccaatcact cttagatccc attacgatcg caatttcagc tttatttggc attttaaatc
    11821 cttatgatac taatgtaaaa cagtgtaatc atagcataca aagcaaacgt ttgcgtagct
    11881 atttaagaag tgaaaagcaa tttttagggc tgttatctgc tggttaaaat atgatataat
    11941 cgacaaccat tttatttttt ataaatttaa tcatcggaga tataaatgac gagtagtata
    12001 aacaaacgtt cggtaatgac tcttttttcg gataaaaatg atatttacag ccaccaagtg
    12061 cgtattgtgt tagcagaaaa aggggtgcct tatgaaatag agaacgttat gctaggcagt
    12121 atttctgaag atttattaga attgaatcct tacggtaata ttcctacatt ggttgatcgt
    12181 gaattagtgc tgtttaaccc tcgtattatt atggaatatt tagatgagcg tttccctcac
    12241 ccaccattaa tgccggttta ccctgtttct cgtggtcagt gccgtttaaa tatgtatcgt
    12301 attgaacaag attggtattc gcaaattgat attgtgaata aagatcctga atcagcggaa
    12361 ggcaagaaag cgttagcaca gcttaaagaa gatgtattgg cattagcgcc tatttttgcc
    12421 gctaaacctt attttatgag cgatgatttc agcttggttg attgctatat tgcaccgtta
    12481 ttatggcgta tgcaaatctt aggcgttaaa ttcagcggtg caacggcaaa accaattaat
    12541 gcgtatatga cccgtgtatt ccaacgtgat agttttatcc agtctgttgg cggcgaagcg
    12601 ccaaaacatt taatggacga taaagactaa tgaaaccatt aagaccttat ctttataatg
    12661 cctactataa ctggattatt gatagcgata acacgcctta cttattagtg aatgcagaat
    12721 ttccagacgt agatgtgccg gtagagtttg tcaaagaagg gaagattatt ttaaatattt
    12781 cgcctcgttc catcgggcag tatattgtgg ctgatgaata cattagcttt agcgctcgtt
    12841 ttcagggaat gttaagagat atttatattc cttttggggc aatggtggcg atttatgcgc
    12901 aagaaaccgg tgatggtatt atgttccaag aagaagccta ctacactgaa gaggcttatc
    12961 aagctcgagt tagagcagta gagcagccta aaaaaatcaa ggcgaagaaa acatctacct
    13021 taaagttggt gaaataagag atctatttca tcaaaacaca ttacaagcgg ttaaattttt
    13081 ctgattattt gcaaatatca gtcaaaattt aaccgcttgt ttgttttgtg acggaaataa
    13141 tcaaattcca cttgcactcc gactaaaaat tgcttatctt tgttttgtgt ttgtactgtt
    13201 gtgatagtac agtaatgatc ttaaggagag aaaatgaaat tccataaaac cttattagtg
    13261 actttgttaa gttcactttc tgtagcggca ttagctcaag ataaaattca aaatgtagca
    13321 attacagcga ttgtggaaca ccctgcatta gattcaattc gtaaaggtgt gattgaagaa
    13381 ttagcccgag aagggtttgt tgatggtaaa aacattaaaa tcgactatca gtctgcacag
    13441 ggtagtactg caacagcagc acaaattgcg cgtaaatttg ttggggataa agcagatatt
    13501 attatcccga tcaccacacc ttcggcacaa cctgttgttg ctgcaacacg ttctatccca
    13561 attgtgtttt caggcgtgac agacccggtt gctgcaaaat tagtaaaatc gtgggagcca
    13621 agtggcacta acgtgacggg gatttcagac cacaaagcga tggctccaca agtgaaatta
    13681 attcaaacat tagtaccgga tttgaaagct gttggttatg tgtatagtgc aggtgaagtt
    13741 aattctgcga ttgtgttaga agagttaaaa caagaggctc aaaaacaggg ctttactata
    13801 gtgccggttg ctgttcaacg cagtgccgat attggcactg ctgctcgcag cctaaacgga
    13861 aaagtgcagg ctatttatat ttctgaagat aatgcagttg tttcggctta tgaagcctta
    13921 cataaagcgg ctttagaagc aaaaattccg gtgattgctg ctgaccgtga tacagtacaa
    13981 cgtggtgcag tggcagctta tgcggttaat caatatgata ttggtgtggc aaccggtaaa
    14041 gttgctgctc gtgtattaaa aggggaaaaa gcaggtacaa ttccaatcca agaagtcagc
    14101 aaattagagc tttcaattaa tactaaaacg gcaaaagaat tgggcattac tataccagag
    14161 gtattaatca aagaagctaa acaaactttt tagtgtaaaa aataaaaatt tgttttattt
    14221 gtcataatct tgtagagtaa aaattcattt caactcagct aaggagaata ttatgggatg
    14281 gattgctgca attattgttg gcgctataat tggttggata gcttcggctg taatgaaaag
    14341 tgaaggcgga ctttgcaaaa atattattat tggtattttg ggttcgtcac ttggacgctg
    14401 ggtatttggt gatgtattag gtattggttc cgcttatagt gccggagact ttaatatagt
    14461 cggtatcttt tttggtgtat taggggcagc tcttttgatt ttcattttga gaaaattaag
    14521 cataattaac taatttcgta tttcagaaag gaagcagttg ttttataact gcttcttttt
    14581 tgttaaatat actctttttg ctcttgcatc agttgtgtga aaaaatcaat taggattcgc
    14641 actttaggag agagataacg acggtttgga tagagtaagc tgatttgtaa aggttcctgt
    14701 gtcaaaaaag gcataatagg aatcaactct ccgtttttta gctcgtgttt tattaaaaac
    14761 tttggaatgt taatgatgcc caaaccagct tttgccattt gtactaacgc ataaccattg
    14821 ttactgtaaa ttttaccttg tggtttaatt tgcatttttt gtccttgttg agaaaattgc
    14881 cattgaggat ggtattcata gagtaggcag tctcgttcca ctaatgcttc taagccttta
    14941 ggttcgccaa atcgagctaa ataatctgga gaagcaacta aaaccaaatg ggaatctgca
    15001 atttttttcg ctacaatgga actatctgca aggctaccaa tacgcagcac caaatcaaag
    15061 ccttctgcaa tcacatctac ccgacggtca ctaaattcaa tatgaagggc taaattaggg
    15121 taatcttcca taaatttccc aaggtaaggg gcaatgaagc gagagccaaa atccattggt
    15181 acagacattg ttattttccc ttgtagcgtt gagttaatat tacttacgct ggcatcggcc
    15241 tcttttagtt catttaaaat aggcaagcat tgctgatagt agagcaaccc tgcctcagtt
    15301 ggcgtaattt ttcgagtggt tcgttgtagt aaacgcacat tgagatgttc ttctaactga
    15361 gccaccaatt tacttgccat gggtaacgaa atttgagctt gttgtgctgc ttgagtgaaa
    15421 ctttgggttt caattacttt acaaaataaa ctgattgcgt ttagtttatc cattttctct
    15481 cttctttata ttgtaatttg tgttaaggct tgctatcgta aaaatagtgt ctaaaaaaat
    15541 caacttaaaa agaaataatt tcaaacaatt taaaataatt attaaaaatt aggtaataaa
    15601 ttatgggaaa atcactagtt attgtggagt ctccggctaa ggcaaaaaaa attaaccaat
    15661 atcttggtag taattatgtg gtgaaatcga gtgtggggca tattcgtgat ttaccgaaaa
    15721 gtggtagtga tgaaaaaacg gaaaaagcga aaccgatttc aaccaaaggg ctgaccgctg
    15781 ccgaaaaagc taaaatcaaa gcagaaaaag agcgtgttgc attggttaaa cgtatgggta
    15841 tcgaccccta taatggctgg aaagctaact atcagatttt gccggataaa gagaaagtgg
    15901 tttccgagct aaaatcgttg gcaaagaaag cagatcatat ctatctggca accgacttgg
    15961 atagagaagg ggaggcgatt gcgtggcatt tgcgtgaaat cattggtggt gatgacagcc
    16021 gttttagccg agtggtattt aatgaaatca ccaaagatgc gatcaaaaag gcttttgacg
    16081 atccgcaacc gctcaatatt gaccgtgtaa attcccagca aacccgccgc tttttagacc
    16141 gtgtagtggg ctttatggtg tcgccattat tatggaaaaa agtagctcgt ggtttatcgg
    16201 cagggcgtgt gcaatcggtt gccgtaaaat tactggttga gcgtgagcgt gaaatcaagg
    16261 cgttccaaag cgaggagttt tggactattc ttgccaatac gcaaattaat cgtaaaaaat
    16321 taccgcttga attaactact tataaaggta aaaaattctc ggcaagcaat gaggctgaag
    16381 caaatgttgc agtgcgtgct ttggagcaga gcgattttat tgtttctaat attgaagcca
    16441 aagaaaccag ctctcgagct gctgcaccat ttattacctc atcgttacaa cgtgccgcta
    16501 gcactcgttt aggttttggg gttaaaaaga cgatgatgtt agcccaacgg ttatatgaag
    16561 cgggttacat cacctatatg cgtactgatt caaccaacct tagccgtgaa gcattagcaa
    16621 tggctcgagg ttatattcag gataatttcg gggcgaatta tttgccggaa aaagcaaatg
    16681 tgtatcgcag taaagataat gcccaagaag ctcacgaagc cattcgcccg tcggatgtga
    16741 atgtcaaaat ggcggattta aaaggaatgg ataaagatgc cgagcgttta tacgatttaa
    16801 tttggcgtcg tttcttggcg tgtcaaatgt tgcctgctcg ttatgattct accgcagtca
    16861 cagtgtctgc cggagactat gaactcaaag caaacgggcg tgtactgcgt tttgacggct
    16921 ggacgaaagt actgccggtg caaggcaaaa atccggaaga tcaggaatta ccggcggttg
    16981 aactgcatca aaaattaacg cttgatgaaa ttgtgccaag tcagcatttt actaaaccgc
    17041 ctgcacgttt taatgaggcg tctttggttg ctgagttaga agagcgaaaa attggccgcc
    17101 cttcaaccta tgcttcaatt atttcgacga ttcaagaacg tggctatgtt cgcaccgaaa
    17161 acaagcgttt ttatgtggaa aaaatcggtg aagtagtgac ggatcgcctc aacgaatcat
    17221 tcaaagattt aatgaattat gatttcactg ccaatatgga agaggtgctc gaccaaattg
    17281 cagaggggtc taaaaattgg aaagaagagt tgaatacttt ctttaaacat ttctctgaag
    17341 agttgagcca agcagaatta gatgaacttg aaggcggaat gaaaccaaac agccttgtgc
    17401 caaccgatat tgattgcccg acttgtggac gaaaaatggc aattcgcacc gcttccacag
    17461 gggtattttt aggttgcacc ggctatgctt taccgccaaa agagcgttgc aaaacgacaa
    17521 tgaatttaat tccagaggcg gaatttttca atgtgttaga ttcggattct gaaaccaaag
    17581 ccctaatggc tcgcaagcgt tgcccgaaat gcgattcggc aatggatagt tatgtgattg
    17641 atgctgaacg taaattacac gtttgtggta ataatccaaa ttgtgatggt catattattg
    17701 agcaaggttc cttcaaaatt aaaggctatg acggacctgt agtggaatgc gataaatgcg
    17761 gttcagatat gcacttaaaa ctgggtcgtt tcggcaaata tatgggctgc acaagctgcg
    17821 ataacacccg taaaattctg aaaaacgggg aagttgctcc gccaaaagaa gatcctattg
    17881 cttttcctga attaaaatgt gaaaaagccg atgcctattt tgtattaaga gacggagcaa
    17941 gtggggtgtt tatgtcagct cataacttcc cgaaagtgcg tgaaagccgt gcaccaaaag
    18001 tggtagagtt agctcaatat cgtgaacgtt tgccggagaa attgcagtat cttgccgatg
    18061 ctccgcagca agatccggaa ggaaacgagg caattatccg ttttagtcgt aaagagaaac
    18121 gccaatatgt gacttctgag aaaaacggca aagccaccaa atggattgtt gattatctag
    18181 acggtaaatg ggttgagcgt aagaaataaa gcttaaaaga caagcggtaa aattttctaa
    18241 aaattttacc gcttgctttt agatgttctg agcgagtagt tcatcaattg ctttacttaa
    18301 tttattgcga tcgtgtcggt aataaacgtc attcgcagat aagttttttc gcaagatttg
    18361 aatatgttcg ggaagttcag aaccggcatc atcagtcgta attaccgcat taattctagc
    18421 ctgtccgata cagttctcca tccattcaat tcgctgatta agtgatagtt gcccagctgg
    18481 gccatgttct tgtccgatat tgtcaataaa tactactcgg gctttgcttt gagcaataga
    18541 gtttgctatg cctgccacca gcaaattcgg cataatactg gtaaaaaagc tacctgggcc
    18601 tagcagtatt aactcagcac tttgaatagc tgaaatggct tctggtgtag caacaaccat
    18661 agtatctaac gctaaatgtt gtggtgtttc tgctaaagaa tcaatttgca cttcaccaaa
    18721 tactgattcg cctgaatgca actgtgcaat taaatgcacc ggtatttcag acattgggat
    18781 aagttgcgat cttacgtgca ataattctcg caccaaatta atcccttcta gcggtcggat
    18841 ttgcatattt tcaagggcgg tgagaattaa attgcctaga ttatgtccag cgagttcgcc
    18901 tgtgccagca aaacgatact caaacaaccg agaagctatc gttggtttaa cgataatttg
    18961 atttaaacag ttgcgtaaat ctccccaagc aatcacccct tgttgtgaac gtattctacc
    19021 ggttgagcct ccattatcgg tagtggcaac aatgccggta agccgttcct ttaaaaaaga
    19081 gagcgcggag agcaatcgac ctaagccgtg gcccccacct agtgcaacaa ctgcattgag
    19141 ttggtttaaa tagtgatgtc gggtaggttt aaaaggaata atatctgtat tttccatctt
    19201 gggatttcgt ttatttttct aaaataatgg catctgactg ggctgaaggc aatgcttgta
    19261 atacagcttt aaccaaagtc gctaaaggaa tcgcaaaaaa cactccccaa aagccccata
    19321 aaccaccaaa gatgagtacg gcaataataa ttgtcagagg gtgtagattt actgcttcag
    19381 aaaataaaaa gggtacgagt aaatttccgt ctagcaactg actaataata aatgcgagca
    19441 ttaaatagta gaaatccggc gataacccga actggaatag agcaattaac attaccggaa
    19501 tgctgactaa aaccgcaccg atgtagggaa ctaacactga aatccctacc gctacagaaa
    19561 gtagtaacgg atagcgtaaa tcaaaaaaga ggaaaataat ataagtgaca accccaacaa
    19621 ttagaatttc taaaaattta cctcgaatat agttggcaat ttgttgttgc atttcaaacc
    19681 atactcgtgt tgcaagtcga cggttttgcg gtaatacttt actaaaagaa cgcattaaaa
    19741 cgattttatc tttcagtaag aaaaagacca tgagtgggac taagaaggtg taaatgccta
    19801 agccaactaa gctgatgata gagttaatcg agagtgttag aagtgattct cccatactca
    19861 aaatattact tttagcggta ttcacaatgg aatctagggt cgcataatct actaattcag
    19921 ggtaatgctc cggtagggct tgtaaccaag cattgagcag attaaacatc gaaggtaaat
    19981 cttgaataaa ggtaactgct tgattccaaa ggctgggtag tagtactacg cctaaaaaag
    20041 ataataaagc gatgaaacct cctagtacta gaatgacact caaagttcga ggtaatttga
    20101 gtttgctcga caaaaaacgg attggccatt ccaataaata ggcaaacaca agtgcaacca
    20161 gaaggggcat aagcagatcg ctaaaaaaat agataatacc gaaaccgatc aatagaatac
    20221 taaacagcac aactatttgc gggtcggtaa atttttttcg ataccaatct tgcaacattt
    20281 gaaacatatg gattgccttt aaattatgcg atgaaaatta tttctggcta cagactgcaa
    20341 tgaaccctag ctttttgtcc gggtcattaa atagtttgta cattttatta aaggtttcgc
    20401 gattttctgg ttttaatgca ttgccgataa ttttcatggc gcctaaaaca ccttcatcat
    20461 gaatcagacc tttaggggaa agtagagaca tttctccgga aaaggtatca acattacgga
    20521 aaccacaacg ttggaataat gatttccagt ctgctttagc aagtggagag acagtgatat
    20581 tgattgcatc acgcaactcg gctaataaag tatcggagtc tttatcttgg ataacaatat
    20641 cgtgcgttaa taaaaagcca tttggtttta atacacgaaa atattcacgt attgcctttt
    20701 ctttcgcttc tagaggaagc attgtcagca tggcttcatt aattacaata tcaaaacttt
    20761 cgtcgtcaaa tggcagtttt gttgcgttgg cgcgctgtac ttgaattaaa tgctcaacat
    20821 ggttttcttt gatattttta cgtgcttttt caagcgcatc ttcgtctaaa tcaataccaa
    20881 caatttggca ttcaaattgt tgagctaatt ggattgcagt agtccccatg ttacaggcaa
    20941 cttcgagcac ttttttattt ttatcaaaat ccccgtttgc aattaaccaa tcagttgcta
    21001 atttcccccc ggggcgtaaa cgagttttgc ctaaacgagc taaaaaatga tgaccaactt
    21061 cttctttttt cataaaaacc tctggatttg caaaatacgt taaatatatg accgcttgta
    21121 ttgtgatcta tgttcgttat tatactcaat tttttcattt tcttatatac aacatcaaca
    21181 gattttgcca gaatacaacc tcattttgat atgaggaaaa tagaatgagt aagcaaaaga
    21241 atgattacct ccaccagcga ggtcaaatta aagaaagtgc agtaaaagca ttagtgactg
    21301 atccactttt tagacaacgt gtagaaagaa atcgtaaagg gaaagggagc tatcgcagac
    21361 aagaaaaaca caaaaaaact atctatgggc aaaaagaaac cccatttaaa aatattcggt
    21421 tagagtcttt ttaaatgggg ttttatttgt agcttattgt agttttataa gcctgataaa
    21481 cactatggtt tactgaaata ggccaacaac ggttctggat tttgaatata agaagaaagt
    21541 tctttatgct ctgggtgacc catataggga atttgcccaa gtaaaggcgc attaattttt
    21601 tgtgtcagta gttcaattaa ttcgtgataa tgccgtagcc ctggatttac tctgtttgcg
    21661 acccaactta ctaattttac accacgctgc aaaatttcat tcgcagtaag tagtgcatgg
    21721 ttaacacaac cttccttaat tcccaccact aaaacaaccg gcatattgtt ttgcattacc
    21781 caatcagcaa aatagtaatc cttgttaata ggagttagcc agccataggt tccttctacg
    21841 acaacatttg gataggcatt ttctagtcgt tttaaatctg tgtttaattt ttccagttga
    21901 atatgatgaa ctgcatctaa agctgcaaat acaggggtac tggaatgaat aaaagtatag
    21961 ctattaatat cacgatagct aacattagtt ggacagctat ctagtatggt taatacgtct
    22021 gaattatctt cagtagcata atcatattga gtaggttctg tgggtaatga atcatcaccg
    22081 ccacaagcaa tgggtttata gccaattaca ggaaaactat gttttgtaag tgtctgtatg
    22141 atggctcggg taaccacagt tttccctacg ttggtgtctg ttccggtaat aaataatgag
    22201 ggcataaatg gctcctttcg aaaatatggc tggtagttta accaaaaata gatcaattta
    22261 ttctgtcttt gatcaaattt ccgtcataaa ttccttgttt tattgctgaa caggcaatta
    22321 atggactatt ccaatcgtat tggctggtaa ctaaatcgat ttttaggttt gtttgtaaca
    22381 aatttttatg caatttttct gaaatttgcg taaataacgg ctcttttatt ttgatcaatg
    22441 gcgagtttag cataattttt t
//
LOCUS       DANLZQ010000027        22208 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.027, whole genome shotgun sequence.
ACCESSION   DANLZQ010000027 DANLZQ010000000
VERSION     DANLZQ010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 22208)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22208)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22208
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.027"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            148..1011
                     /gene="rarD"
                     /locus_tag="PXE50_000994"
     CDS             148..1011
                     /gene="rarD"
                     /locus_tag="PXE50_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HDL5621921.1"
                     /translation="MLKGILASLAANVLFGAVYYFAILLRPLEGEAMFGFRIVVVIPF
                     ILLAIILFKQQSAFADLLQKIRQNPPLVLVILLLALNTGVQLWLFLWAPNHGQALQVS
                     FGYLLLPIVAVALGKMVFKEHFTRLKWLSLLFAVIGVGSSLFFNSTISWATWVAGLGY
                     PLYITLRRYFQINTLATFFVELLLVLPVALYYLSQVEMTPIVAENPQIYFYLGLLGLV
                     SGSAFILYILSSNLLPINVLGLLGYVEPLVMLLISFAIGEKLDANSYILMVCLLVSIG
                     LLSWDSFRSKV"
     gene            complement(1164..1682)
                     /locus_tag="PXE50_000995"
     CDS             complement(1164..1682)
                     /locus_tag="PXE50_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lhr family helicase"
                     /protein_id="HDL5621922.1"
                     /translation="MILLRGDTMQFIEFTDPDSGISYQYSEFTIANVAFIINFCSDAD
                     VISTLSALGKDITNYINTYSCCTIKFMAKEHLENSGSNIDIYAPAANHQFKRKEIIAL
                     QETLERLLFEHYVRFTPESYLFIAERDSLNRMYQRMCVPRCDFMQSFQVVYPLGVNQD
                     CFILITPKGNLK"
     gene            complement(1849..3513)
                     /locus_tag="PXE50_000996"
     CDS             complement(1849..3513)
                     /locus_tag="PXE50_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HDL5621923.1"
                     /translation="MNISFVFPQTLGNARRFLVNEMLSAAAKQQGHNVVAANQADFVV
                     LFDNAIPQEAAGKQGAILDLEQAFAQPEASLKQAVENAQTFANATATTAVSAVSSGVK
                     NIVAVTACPTGVAHTFMSAEAIENYAKAQGWNIKVETRGQVGAGNPISAEEVAAADLV
                     FVAADIDVDLEKFKGKPMYRTSTGLALKKTTQEFEKAFAQAKIYEGGVAKADNAEAPT
                     SEKKGLYKHLMTGVSHMLPLVVAGGLLIAISFMFGIEAFKDETIAGGLPKALMDIGGG
                     AAFHLMIAVFAGYVAFSIADRPGLAVGLIGGMLATTAGAGILGGIVAGFLAGYTVKFL
                     NGAIQLPASLTSLKPILILPLLGSAIVGLLMIYVINPPVKALMDALVEWLNTMGQTNA
                     IILGIILGAMMCTDMGGPVNKAAYTFGVGLIASQQYMPMAAVMAAGMVPPIGMAIATL
                     IARSKFNTNQRDAGKASFVLGLCFISEGALPFVAADPVRVIASSILGGATAGAISMAL
                     GITLQAPHGGLFVIPFVSQPLMYLAAIAIGSLVTGVVYAAIKQKAE"
     gene            complement(3539..4483)
                     /gene="fruK"
                     /locus_tag="PXE50_000997"
     CDS             complement(3539..4483)
                     /gene="fruK"
                     /locus_tag="PXE50_000997"
                     /EC_number="2.7.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase"
                     /protein_id="HDL5621924.1"
                     /translation="MRIATVTLNPAFDLVGKLQRIEIGEVNTVETLGLYPAGKGINVA
                     KVLADLGTKLSVTGFLGEENQGDFVNAFKHNDLADEFYRINGKTRINVKITETEADVT
                     DLNFLGFEISESDWEKFVTLSHQWESKFDLVAVCGSLPRGVTPEKFASWLESLHRQGL
                     KVVLDTSNAALTAGLTAHPWLVKPNRRELEVLVGHSLNSIEEIISAAKQLRSRGIENV
                     IISMGEQGSLWLNHEGVLQARPPRCENVVSTVGAGDSMVASLIYGLSQGWSKEQTLRF
                     ASATSALAVVQSNVGIADRAALDDIIKQTDITVISENH"
     gene            complement(4497..5975)
                     /gene="fruB"
                     /locus_tag="PXE50_000998"
     CDS             complement(4497..5975)
                     /gene="fruB"
                     /locus_tag="PXE50_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused PTS fructose transporter subunit IIA/HPr
                     protein"
                     /protein_id="HDL5621925.1"
                     /translation="MLNLSAKNIRLNGSASNKEEVIRFVAAELVAKGNVAAGYEVGML
                     NRETQTSTFLGNGIAIPHGTLDTRDLVKETGVQIIQLPQGVEWGEGNTAYVVIGIAAK
                     SDEHLTLLRQLTTVLSDEEAAATLAKTQNLDEFIAVLSGKKNLPALSQELISLNIESS
                     SPITLSAINAAKLQEQGYVSQAFISDVVANKALHLGNNLFVVDSAKGNQANGIAIARN
                     TQGQTLLTVAETDNALQPLLTQLLKPEVRSQFAHFSAEQMLGLLKGESVASTPVTNVE
                     ASGNQVVGTFTIRNDNGLHARPAAVLVQTVKPFSSKISVENLDRNTAPASAKSAMKVV
                     ALGASQGHRLRFVAEGEDAQQAIEALQQAIINGLGESVSFVPAVADTIESIAVSAIPA
                     EETATAVDANTKEATFVIKNEHGLHARPSAVLVNEVKKFNAKIEVQNVDKNSPLVSAK
                     SLMKIVALGVTKGTTLRFVASGDDAEVALAAIGAAIEAGLGE"
     gene            6263..8485
                     /gene="glgB"
                     /locus_tag="PXE50_000999"
     CDS             6263..8485
                     /gene="glgB"
                     /locus_tag="PXE50_000999"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching protein GlgB"
                     /protein_id="HDL5621926.1"
                     /translation="MQDYTYSEKDAFFVERLSSGSCNDPFSYLGIHPSNNGVIIRVFL
                     PSAIACQVIDLNGKPVSSMLKIDDRGFFIAELIGKKTDFSYRLLVEYPDSTVDIEDPY
                     RFKTHIQELDNWLFAEGKQLRPYEKLGAHLVTQNEVGGVHFSVWAPNAQRVSVVGDFN
                     HWNGLVHSMRFHPDSGIWDIFLPNVKKGECYKFEVLDRNGVLRLKSDPYAFASQFRPE
                     TASIVSGLPSIVPAEKTCRNANAPDKPISIYEVHLGSWRRNIENNYWLSYEELADELI
                     PYVKDMGFTHIELLPISEFPFDGSWGYQTTGIYSPTSRFGTPEGLSYFIQKAHDKGIG
                     VILDWVVGHFPVDEHGLVYFDGTHLYEHSDPKEGYHKDWNTLIFSYGRNEVSNYLSGN
                     ALYWIERFGIDALRVDAVASMIYRDYSRSDGEWIPNKYGGRENLEAIDFLRHTNNILR
                     DESQGGASIAEESTSFAGVSHSTERGGLGFNYKWNMGWMNDTLRYMQKDPIYRRYHHN
                     LMTFGMTYQYSEQFVLPLSHDEVVHGKGSLLNKMPGDCWQKFANLRAYYGYMWGYPGK
                     KLLFMGNEFAQGKEWNFAESLDWYLLGEEGGEWHKGVLGWVKALNHLYTQTPALFEQD
                     YNPEGFEWLVVDDHDNSVFAFERKAKNGDSVIVVSNFTPIVRENYRFGVNELAEYQEI
                     LNSDLACYCGSNVSNANRFASELIASHGKAYSLSITLPPLSTIFLKRAADKKTKQNKT
                     "
     gene            8509..10521
                     /gene="glgX"
                     /locus_tag="PXE50_001000"
     CDS             8509..10521
                     /gene="glgX"
                     /locus_tag="PXE50_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HDL5621927.1"
                     /translation="MHYFRGKPFPLGNKLDRQAGEFGTNFAIVSQNATAIELCLFDEN
                     HHETRIPMFSSGDTWHIFVAGVQAGTKYGYRVKGIQDEQAGLLFNPQKLLTDPYAKAI
                     EGKPDLSSAEAAAWYKWNDERDNASLAPKSIVIDEHFDWENDSQLFTPWAETIIYEMQ
                     VKGFSQRNFQIPSDIRGTFAGLAHPVSIDYLKTLGITAVELLPVTYHIDETHLQKQGL
                     VNYWGYNVLGNFAIDPNLAADKQNPLKEFKQLVKTLHQAHIEVIMDIVFNHTAESDKN
                     GPMLSFRGIDNTAYWLDKQGEYENWTGCGNTLNLSNPYILCWAIDCLIYWVEECHIDG
                     FRFDLASILGRTPSFSEKADFFTALKSHSKLTHIKLIAEPWDIGVEGYQLGQFPEPFY
                     QWNDCYRDDIRRFWLQNQGDWGLLARRLAGSDDVFTKYSVSKSINFITAHDGFTLQDL
                     TSYQQKHNWANGEQNRDGHNSNYSNNHGVEGQTADELVKKQREITACSLLATLFLSAG
                     VPMLLAGDEIGHSQQGNNNSYCQDNEITWLDWENMNHTRLDYVRSLIRLRKKIALLSK
                     QNNWWQEDSVQWLNPSAQLMNIDDWHNQHNGLVVLLQEEWLLLFNANRQPQPFLLPQG
                     NWKVVLEQAQGILMTDTQAVTLNNMGVCVLQKSDVMFANKLETQYA"
     gene            10514..11827
                     /gene="glgC"
                     /locus_tag="PXE50_001001"
     CDS             10514..11827
                     /gene="glgC"
                     /locus_tag="PXE50_001001"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase"
                     /protein_id="HDL5621928.1"
                     /translation="MLNQESTALVARQDLTNDTLVLILAGGRGSRLYELTDKRAKPAV
                     YFGGSRRIIDFALSNCINSNLLKIGVITQYAAHSLLRHLQRGWSFLPYERNQYIDMLP
                     ARQQLDENTWYRGTADAVYQNMAMMKSHYRPKYVVILAGDHIYKMDYTQMLKDHVDQG
                     AKCTVGCIEVPRSQATEFGVMAVNEKLKVKEFVEKPADPPAMPGKPDSSLASMGIYVF
                     NADYLYEMLEKEASTPGTSHDFGKDIIPKAVEQGVLYAHPFERSCKGRNASGAIYWRD
                     VGTIDSYWAAHMDLVSEDPELDLYDESWPIHGRPQQTAPARFFYNRARARTLDNSLIA
                     GGCVITDAEISNSVLFNRVHVEAESVIEHTVILPQVTIGKNCVIKRAVIDRHCVIPDG
                     LEIGVNAEEDAKRFRVSKNGIVLVTQSMLDKLAGKEANSDIKYTI"
     gene            11950..13386
                     /gene="glgA"
                     /locus_tag="PXE50_001002"
     CDS             11950..13386
                     /gene="glgA"
                     /locus_tag="PXE50_001002"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase GlgA"
                     /protein_id="HDL5621929.1"
                     /translation="MKVLHICSEMYPLIKTGGLADVMGALPFAQQQAGNDVRVLIPYY
                     PKVAQTLGETVEVATIGTFAGTVSVRFAYFNGLGVYVIDAPHLFMRDGNPYHDSNYQD
                     YPDNYKRFALLGYIGAQLAQGLDHWWGTAQVLHAHDWQAGLACAYLKSWGSNVKTLFT
                     IHNIAYIGRFNAFHLAELGLPWEFFHAEGLEFYGEISYLKAGLYFADRITTVSPTYAR
                     EITEEIAAAGLHGLLATRQYQGRLRGILNGVDAEVWNPETDTHIVVNYRANYMHGKAK
                     NKAELQRIFGLPEDKEALLMVMVTRLTEQKGADFLLANIDTLMQHKVQIIVLGSGSPD
                     LENALRYFQHKYPNQIGVKIGYDEALSHQIIAGGDLILVPSRFEPCGLTQLYGLKYGT
                     LPLVRRTGGLADTVVDSHKESIENRSATGFVFDYPDAPAFLEAAMRAISLWQKQKLWS
                     SVRQNALAQDFGWAKVAEQYQNLYHEII"
     gene            13481..15981
                     /locus_tag="PXE50_001003"
                     /pseudo
     CDS             13481..15981
                     /locus_tag="PXE50_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651737.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan phosphorylase"
     gene            complement(16068..16784)
                     /gene="trmJ"
                     /locus_tag="PXE50_001004"
     CDS             complement(16068..16784)
                     /gene="trmJ"
                     /locus_tag="PXE50_001004"
                     /EC_number="2.1.1.200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ"
                     /protein_id="HDL5621930.1"
                     /translation="MQILNQIQIILVETSLPANIGSAARAMKTMGLTHLRLVAPKQPL
                     DEQAEALAAGAKDVLDNAQCYATFDEAIADCQLVIGTSARLRHLQNTLIEPRDCGELV
                     VNRTNLGKVAIVFGRERVGLTNEELLKCQYHLNFPTNPDYGSLNLAMAVQLASYEIRM
                     AYLQNSGEKQPLAADKDYPTAQALEHFFAHTERLYTELGFIRNDSVMLKLRRLYQRAE
                     LETNELNLLRGMLTAVEKAN"
     gene            16964..18502
                     /gene="pntA"
                     /locus_tag="PXE50_001005"
     CDS             16964..18502
                     /gene="pntA"
                     /locus_tag="PXE50_001005"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007525314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HDL5621931.1"
                     /translation="MLIGVPRELLDGETRVAATPKTVEQIKKLGFDVLVEQDAGFKAS
                     FEDNTFLNAGANIGTQQEVWNADIIFKVNAPTEAEIELIKEGVTLVSFIWPAQNPQLM
                     EKLQSKKINVLAMDAVPRISRAQALDALSSMANISGYRAVIEAANAFGSFFTGQITAA
                     GKVPPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDSRPEVKEQVKSMGADFLEIDFEE
                     EGGSGDGYAKVMSEEFNRRAMALYAEQAKEVDIIITTAAIPGKPAPRLITKEMVDSMK
                     PGSVIVDLAAATGGNCEYTKAGEIVVTDNQVKVIGYTDFPARLPTQSSQLYGTNLVNL
                     LKLLAPNKDGQIEINFDDVVLRGVTVVRDGELTWPAPPIQVSAQLQKQAAAPQAVKKE
                     EKPADPRVKYGVMAAAGVLFLWLASVAPAAFLSHFTVFVLACVVGYYVVWNVSHALHT
                     PLMAVTNAISGIIIVGAVLQIAQPTGNFFIDILAFIAILVASINIFGGFKVTQRMLAM
                     FRKG"
     gene            18517..19962
                     /gene="pntB"
                     /locus_tag="PXE50_001006"
     CDS             18517..19962
                     /gene="pntB"
                     /locus_tag="PXE50_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HDL5621932.1"
                     /translation="MSFGFVTAAYIIAAILFIMSLAGLSKHETAKAGCWYGIVGMAIA
                     LVATIFGPQSHGTIWILIAMAIGGFIGVKKALKVEMTEMPELVAILHSFVGLAAVLVG
                     FNSYGLHTNALMPANLDETAQAAFLAEQATLANIHNVEVFLGIFIGAVTFSGSLVAFG
                     KLSGKLFGRKVSSAALNIPHKHKWNLAAIIVSVFLMIVFLNNPHNIFPVLIMTIIALV
                     FGWHLVSSIGGADMPVVVSMLNSYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYI
                     MCKAMNRSFISVIAGGFGNEVQSGKGDEEYGEHRETKAEEVAEMLKNASSVIITPGYG
                     MAVAQAQYPVAEITAKLREKGVNVRFGIHPVAGRLPGHMNVLLAEAKVPYDVVLEMDE
                     INDDFEETDVVLVIGANDTVNPAALDDPSSPIAGMPVLEVWKAQNVIVFKRSMAVGYA
                     GVQNPLFFKENTQMLFGDAKERVDDILRALN"
     gene            complement(20029..20955)
                     /locus_tag="PXE50_001007"
     CDS             complement(20029..20955)
                     /locus_tag="PXE50_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL5621933.1"
                     /translation="MKPIFLEIRHLRTLIALKESGSVSLAAKRVHLTQSALSHQIKLL
                     EEQYDLTLFERKSSPIRFTPAGERLIKLAYDILPKVIEAELDLARVKQGEVGEVRVAV
                     ECHTCFDWLMPAMDTFRQHWPLVELDIVSGFHTDTVGLLLSHRADLAIVAEEEDSAGI
                     IYKPLFSYEMVAICSKDHPLATKDVWEAEDFKDETLITYPVPDDMLDLLRKILGPAGI
                     KVTRRNSELTIAIIQLVASRRGIAALPYWAVKPYLDRGYVVARKITQQGLYSTLYGAI
                     READATLAYLDDFHDTVKSQSFATLPGLMVLE"
     gene            complement(21065..22180)
                     /gene="asd"
                     /locus_tag="PXE50_001008"
     CDS             complement(21065..22180)
                     /gene="asd"
                     /locus_tag="PXE50_001008"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HDL5621934.1"
                     /translation="MQNVGFIGWRGMVGSVLMDRMVEENNFANINPVFFTTSQAGQKA
                     PVFGGKDAGELKNAFDIEELKKLDIIVTCQGGDYTNEVYPKLKETGWNGYWIDAASAL
                     RMKDDAIIVLDPVNQHVISEGLKNGIKTFVGGNCTVSLMLMAIGGLFEKDLVEWVSVA
                     TYQAASGAGAKNMRELLSQMGELEDSVKAELANPASSILDIERKVTAKMRAEDFPTEN
                     FGAALGGSLIPWIDKLLPETGQTKEEWKGYAETNKILGLSDNPIPVDGLCVRIGALRC
                     HSQAFTIKLKKDIPLAEIEQIIAAHNEWVKVIPNDKETTLRELTPAKVTGTLSVPVGR
                     LRKLAMGGEYLAAFTVGDQLLWGAAEPVRRILVQLTQ"
BASE COUNT         6236 a         4399 c         5007 g         6566 t
ORIGIN      
        1 gaaaaattgg gagcattgta tcgggaaaaa tcgaatatag ctagcttact tacaaatttt
       61 ttcatactat ggggcgtaga taagatttgt aaatttttgt tcaaagtcaa ccgcttgttg
      121 tttgattgtt gataagagga aagccaaatg ctcaaaggaa ttttagcttc gcttgcagcc
      181 aatgtgctgt ttggagcagt ttactatttt gcgatattgc ttcgcccgtt agagggagag
      241 gcgatgttcg gctttcggat agtggtagtc attccgttta ttttgctggc gattatattg
      301 tttaaacagc aatcggcttt tgcggatctt ttgcaaaaaa ttcgacaaaa tccaccgctt
      361 gtattggtca ttttgctcct tgctctcaac accggcgtgc agctttggct gtttttatgg
      421 gctcctaatc acgggcaggc gttgcaggtg tcgtttggtt acttgctttt accgattgtg
      481 gcggtggctc taggaaaaat ggtgtttaaa gaacatttta cccgcctgaa atggctttct
      541 ctacttttcg cagtcatcgg tgttggcagt agtttgtttt ttaacagcac gatttcgtgg
      601 gcgacttggg tagctgggtt gggttatccg ctttatatta cccttcgccg ttattttcaa
      661 atcaacacgt tagctacttt ttttgtggag ttgttactgg tattacccgt tgcactttat
      721 tatctcagcc aagtggaaat gacgccaata gtggcagaaa atccgcaaat ttatttctac
      781 ctcggattgc tggggctggt aagtggcagt gcttttattc tttatatcct ctcgagcaat
      841 ttattaccga ttaatgtatt aggtttactg ggctatgttg aaccgttggt gatgttgctg
      901 atttcttttg ccatcggcga aaaactcgat gccaattcct atattttgat ggtctgtttg
      961 ctggtttcga ttggattatt gagttgggat agttttcgta gcaaggtgtg ataattaagg
     1021 aaaaataaat cgcttgtaga gcaagcggtt taaagattat ttgaccggtt tcaatagacc
     1081 tgcttttttt gctcgctgat aggcttgctt aaaagcgatt aagccttctt gctttaaacg
     1141 aacggaaact ggacgttgtt gattcatttt agatttcctt ttggcgtaat taaaatgaaa
     1201 caatcttgat taacgcccaa gggataaacc acttggaaag attgcataaa atcacatcgt
     1261 ggcacacaca tacgctgata cattcggtta agtgaatctc tctcggcaat gaagagatag
     1321 ctttctggtg taaaacgtac ataatgctca aataataaac gctcaagggt ttcttgtaaa
     1381 gcaattattt ctttacgttt gaactgatga ttcgctgcgg gggcataaat gtcaatatta
     1441 gaaccgctat tttctagatg ctctttcgcc ataaatttga ttgtgcaaca ggaataggtg
     1501 tttatatagt ttgtgatatc tttgcctaat gcggacaaag tcgatataac atcggcatct
     1561 gagcagaaat taatgataaa tgcgacatta gcaatagtaa attcactgta ttgataagaa
     1621 attccactat caggatcggt aaattcaata aactgcatag tatctcctcg tagcaaaatc
     1681 ataacgagtt gatattattc gtaaagtgat gaaaatgatt ttttcgatct cgatcgcaaa
     1741 aataatattt tagacttgat atttcgatga aatagaattc agtaagtacc aatatgatat
     1801 aaaaacggag cgtttcgctc cgtttttgtt tgtatttgtg tttgtgcttt attctgcttt
     1861 ttgtttgata gcggcataga ctacgccggt gactaatgag ccgatggcaa tagcagctaa
     1921 gtacattaac ggttgtgaaa cgaatggaat cacgaataaa ccgccgtgtg gggcttgtag
     1981 ggtaatgcct agtgccattg aaattgcacc ggcggttgca ccgcctaaga ttgagctggc
     2041 aattacacgc acagggtctg ccgccacgaa cggtaatgcc ccttctgaaa taaagcataa
     2101 acctaacacg aatgaagctt tacctgcatc acgttggttg gtgttgaatt tgctacgagc
     2161 aatcagggtc gcaatcgcca taccaattgg tggaaccata cctgccgcca tcaccgctgc
     2221 cattggcata tattgttgtg aagcaattaa acccacacca aaggtataag ccgctttatt
     2281 caccggacca cccatatcgg tacacatcat cgcaccgaga ataataccta aaataattgc
     2341 attggtttgc cccattgtgt ttaaccattc cactaaggca tccattaatg ctttcaccgg
     2401 tgggttgatg acataaatca tcagtaagcc gacaatcgct gagcctaaga gtggtaaaat
     2461 caaaataggt ttaagtgagg ttaaacttgc cggtagctga atcgcaccat ttaagaattt
     2521 tacggtataa ccggctaaga aaccggctac gataccacct aaaatccctg ctcctgcggt
     2581 ggtagcaagc ataccgccga taagaccgac agctaacccc ggacggtctg caattgagaa
     2641 cgctacatag cctgcgaata ccgcaatcat taagtggaat gccgcaccgc caccaatatc
     2701 cattaaggct ttcggcaagc cgcctgcgat ggtttcatct ttaaaggctt caattccgaa
     2761 cataaaggaa atagcgatga gcaagccacc tgctaccacc agcggtaaca tatgtgatac
     2821 accggtcatc aagtgtttat ataacccttt tttctcagaa gttggagctt cagcattatc
     2881 cgcttttgcc acaccacctt cgtaaatttt cgcttgagca aaggcttttt caaattcttg
     2941 agtggttttc ttcaatgcta aaccggttga ggtgcgatac atcggcttgc ctttgaattt
     3001 ttccaaatcg acatcaatat cggcagctac aaagactaaa tctgccgctg cgacttcttc
     3061 ggcggaaatt ggatttcctg ctcctacttg accacgggtt tcaaccttga tgttccaacc
     3121 ctgtgctttg gcataatttt cgattgcttc cgcagacata aaagtatgag ccacgccagt
     3181 tgggcaagcg gtaacagcaa cgatattttt cacaccagat gaaaccgctg aaaccgcagt
     3241 ggttgcggta gcatttgcaa aagtttgtgc attttcgacc gcttgtttga gactggcttc
     3301 aggttgagca aaggcttgtt ctaagtccaa aattgcccct tgcttgccgg cagcttcttg
     3361 tggaattgcg ttatcgaata acaccacaaa atcagcttgg tttgccgcca caacattgtg
     3421 tccttgttgc ttggcagcgg cagataacat ttcattcact aagaaacggc gtgcgttgcc
     3481 tagtgtttga ggaaatacaa aagaaatatt catattggtt tgttcctttg attgaggttt
     3541 aatgattttc tgaaatcacg gtaatgtcgg tttgtttaat aatatcgtct aacgccgcac
     3601 ggtctgcaat cccaacgtta ctttgaacaa cagctagagc agaagtagct gaggcaaaac
     3661 gcaaggtctg ctctttgctc caaccttgag ataagccgta gatcaagctg gcaaccattg
     3721 aatcaccagc acctacagtg ctaactacat tttcgcaacg tggtgggcgg gcttgtaaca
     3781 cgccttcgtg atttagccaa agagagcctt gttcgcccat tgatataatt acattttcaa
     3841 taccacggga acgtaattgt ttagctgcac taataatctc ttcgattgag ttgagtgaat
     3901 gcccgaccag cacttccagc tctcggcggt ttggttttac taaccaaggg tgagcggtta
     3961 agccggcggt gagagccgca ttgctggtat ctaacaccac ttttaagcct tggcggtgta
     4021 aagattccaa ccaagaagca aatttttccg gcgttacgcc acgagggaga gatccacaca
     4081 ctgcaactaa gtcaaatttg ctttcccact gatgagataa tgtgacgaat ttttcccaat
     4141 cgctttccga aatttcaaag ccgagaaagt tcagatcagt tacatcagcc tcggtttcag
     4201 tgattttgac attaatgcgg gttttaccgt taatacggta aaattcatca gccaaatcat
     4261 tgtgtttaaa ggcatttacg aaatcgcctt gattttcttc gcctaaaaag ccggtaaccg
     4321 aaagttttgt gcctaagtca gctaaaactt tagcaacgtt aatacctttg ccggcagggt
     4381 ataaaccaag ggtttctacg gtgttcactt cgccgatttc aatacgttga agtttgccga
     4441 ctaaatcaaa ggcagggttg agggtaacgg ttgcaatacg cataatgatt cctcgcttat
     4501 tcgcctaaac ctgcttcaat cgcagcaccg attgccgcaa gtgctacttc ggcatcatca
     4561 ccgcttgcca caaagcgtag cgtcgtgcct ttggttacgc caagggcaac aattttcatt
     4621 aagcttttgg cacttacaag cggtgaattt ttatcaacat tttgcacttc aattttggcg
     4681 ttgaattttt tcacttcatt caccaacacc gcacttgggc gagcgtgtaa accgtgttcg
     4741 tttttaatta caaaagttgc ttctttcgta ttggcatcga cagcagtcgc agtttcttcc
     4801 gcaggaattg ctgaaacagc aatgctttca atcgtatctg ccaccgccgg tacgaatgaa
     4861 acactttcgc ctaagccgtt aataattgct tgttgtaatg cctcaatcgc ttgttgggcg
     4921 tcttctccct ctgccacaaa gcgtaaacga tgcccttggc ttgcccctag tgctactact
     4981 ttcattgcac ttttcgcact tgccggtgca gtgttgcggt ctaaattttc aacgctgatt
     5041 tttgaggaga acggtttcac cgtttgtact aacaccgcag ccgggcgggc gtgtaagccg
     5101 ttgtcgttac gaatggtgaa tgtgccaacc acttggttgc cactcgcttc gacattggtt
     5161 acaggggttg aagctacgct ttcgcctttt aataaaccaa gcatttgctc cgcagagaaa
     5221 tgagcaaact ggcttcttac ttctggtttt aataattgag ttaatagtgg ctgtagagca
     5281 ttgtcggttt ctgccacagt tagtagggtt tgaccttgcg tattacgggc aatagcgata
     5341 ccgttagctt ggttgccttt ggcggaatcc accacaaata gattattgcc taaatgtaac
     5401 gctttgttgg caaccacatc gctgatgaat gcttgggaaa catagccttg ctcttgtagt
     5461 tttgcggcgt taatggctga taaagtgata gggcttgaag attcgatatt cagagaaatc
     5521 agctcttgag ataaggcagg aaggtttttc ttaccgctta atacggcaat aaattcatct
     5581 aaattttgcg ttttcgctaa tgtggcagca gcctcttcat cacttaatac agtggtgagt
     5641 tgacggagta aggttaagtg ttcgtccgat ttagccgcaa tcccgataac tacataagca
     5701 gtgttgcctt cgccccattc cacgccttgc ggaagttgga taatttgcac gccggtttct
     5761 ttgactaaat cacgggtatc aagcgtgccg tggggaatag caattccgtt acctaaaaaa
     5821 gtagaggttt gggtttcacg attaagcata ccgacttcat agccggctgc tacattgccc
     5881 ttggcgacta attcggcggc aacaaaacgg ataacttctt ctttgttgct tgctgaacca
     5941 tttaaacgga tgttttttgc cgataaatta agcattttag ctccttggat ttaaagttga
     6001 tttttaaact gtaatgttat ggttagttta ctctatattt tgctaaaccg ttatagccaa
     6061 ctaaaaatat ccataaaaat gtttcaaaat gtgatctatg tcacaaaatt taaggtttga
     6121 tgatttaaac taaagattaa aacgatttta ttttgtgatt tagctcaaaa aatggcgtaa
     6181 atccacttct tttatttcta tttagtgata gagtgagaac tattgaaatt taagtattaa
     6241 acgctttaag caaggagtgc cgatgcaaga ctatacttat tctgaaaaag atgctttttt
     6301 tgttgagcga ctttcttcgg gttcttgtaa tgatcctttc tcctacctag gtattcaccc
     6361 tagcaataac ggcgttatta ttagggtatt tcttccttct gccatagctt gccaagtgat
     6421 cgatttaaac ggaaagcctg tgtcatcaat gctaaaaatt gatgatagag gcttttttat
     6481 tgcagagctg attggtaaaa aaacagattt ttcttaccgc ttgttggtgg aataccctga
     6541 ttcaacggtg gatatagaag acccttaccg ttttaaaacc catattcaag agcttgataa
     6601 ttggttgttt gcggaaggaa aacaacttcg cccgtacgaa aaattaggcg cacatttagt
     6661 cacacaaaat gaagttgggg gtgtgcattt tagcgtctgg gcgccgaacg ctcagcgggt
     6721 ttccgtggtt ggggatttca accactggaa cggcttggta cattcaatgc gattccaccc
     6781 cgattccggt atttgggata ttttcctgcc gaatgtgaaa aaaggggagt gctataaatt
     6841 tgaagtgttg gatcgaaacg gcgtgctacg gttgaaatcc gacccttacg cctttgcctc
     6901 ccaattccgc ccagaaaccg catctattgt ttccggcttg ccaagcattg tgccagccga
     6961 gaaaacctgc cgtaatgcga atgctcccga taaaccgatt tccatttatg aagtgcattt
     7021 aggctcttgg cgacgcaaca ttgaaaacaa ttattggctt agctatgaag agcttgccga
     7081 tgaactcatt ccttatgtga aagatatggg ctttacccat attgaattgc tgcctatttc
     7141 cgaatttccg tttgatggct cttggggtta tcaaaccacc ggtatttatt cgccaaccag
     7201 ccgttttggt acgcctgagg gcttgagtta ctttatccaa aaagctcacg ataaaggcat
     7261 tggtgtgatt cttgactggg tagtggggca ttttccggta gatgaacacg gcttggttta
     7321 ttttgatgga acgcatttat acgaacattc cgatccgaaa gagggctacc acaaagattg
     7381 gaatacctta atttttagct acggcagaaa tgaggtgagc aattatttgt ctggtaatgc
     7441 actttattgg attgagcgtt ttgggattga tgcgttgcgg gtggatgcgg tggcgtcaat
     7501 gatttatcgt gattactcac gttcagacgg cgagtggatt ccaaataaat atggcggacg
     7561 tgagaactta gaggcaatcg acttcttacg ccacaccaat aatattttga gagacgaaag
     7621 ccaaggcggt gcgagcattg cagaggagtc cacttctttt gccggagtgt ctcactcaac
     7681 tgaaagaggc ggtttgggct ttaattataa atggaatatg ggctggatga acgacacttt
     7741 acgctatatg caaaaagatc caatttaccg ccgttatcac cacaatttaa tgacttttgg
     7801 tatgacctac caatacagcg aacagtttgt gttaccgctt tcacacgatg aagttgttca
     7861 cggcaaaggt tcattgctga ataaaatgcc gggggattgc tggcaaaaat ttgcgaactt
     7921 acgagcctat tatggctata tgtggggcta tccgggcaaa aaattgctct ttatgggcaa
     7981 cgagtttgct caaggtaaag agtggaattt tgccgagagc ttagattggt atttactcgg
     8041 ggaagaaggg ggcgaatggc ataagggcgt attgggttgg gtaaaagccc ttaaccattt
     8101 atacacccaa acccctgcac tgtttgagca agattacaat cctgaaggtt ttgagtggtt
     8161 agtggtggac gatcacgata attcggtgtt tgcttttgag cgtaaagcca aaaatggcga
     8221 ttcggtgatt gtggtgagta atttcacccc gattgtgcgt gaaaattacc gttttggggt
     8281 gaatgaattg gcagaatatc aggaaattct caattctgat ttagcttgtt attgcggtag
     8341 taatgtcagc aatgcaaacc gatttgccag cgagttaatt gcatcgcacg gtaaagccta
     8401 ctccttgagc attactttgc caccgctatc gactatcttc ctcaaaagag ccgcagacaa
     8461 aaaaacaaaa caaaacaaaa cataacttaa agaaacataa aaaataatat gcactatttt
     8521 agaggtaagc cttttccttt aggcaataaa cttgatagac aagcgggtga atttggcaca
     8581 aattttgcca ttgtttcgca aaatgcaacc gctattgagt tatgtctttt tgatgaaaat
     8641 caccacgaaa cccgtattcc gatgttttct tccggagata cttggcacat ttttgtagca
     8701 ggtgtacaag cagggacaaa atatggctac agggtgaaag gcatacaaga tgaacaagcc
     8761 ggtttgttat ttaatccgca aaaattattg actgatcctt acgctaaagc gattgaaggg
     8821 aagccggatt taagtagtgc agaggcagcc gcttggtata aatggaacga tgaacgggat
     8881 aatgcctctc ttgcacctaa gtctatcgtg attgatgagc attttgattg ggaaaatgat
     8941 agccagttat tcactccttg ggcagagact attatttatg aaatgcaggt gaaaggtttt
     9001 agtcagcgga actttcagat tccaagcgac attcgaggca cttttgccgg tttggctcac
     9061 cctgtttcga tagactattt aaaaacctta ggaatcaccg cagtagaact tctacccgtt
     9121 acttaccata ttgatgaaac ccatttgcag aaacaagggc ttgtgaatta ttggggctat
     9181 aatgtattag gtaattttgc tattgatccg aatttagcag cagataagca aaatcctctt
     9241 aaagagttta aacagctcgt aaaaacatta catcaagcac atatcgaagt gattatggat
     9301 attgtgttta accacacagc tgagagtgat aaaaacgggc cgatgctaag ttttagaggc
     9361 attgacaata cagcttattg gctagataaa cagggcgaat acgaaaattg gactggctgt
     9421 ggtaatacct taaatttgag caatccttat atactctgct gggcaatcga ttgcttaatc
     9481 tattgggtgg aggagtgcca tattgatgga ttccgctttg atcttgcctc aattctaggt
     9541 agaacaccga gtttttctga aaaagcagat tttttcacag cacttaaaag ccattctaaa
     9601 ttaacacata ttaagttgat tgctgagcct tgggatattg gtgtagaagg ttatcaatta
     9661 gggcaattcc ctgagccttt ttatcagtgg aatgattgtt atcgtgatga tatacgccgt
     9721 ttttggttac aaaaccaagg tgattggggg cttttggcac ggcgattggc aggaagtgat
     9781 gatgtgttta ctaaatattc cgtttcaaaa agtatcaatt ttattacggc acacgatggg
     9841 tttacgttac aagatctcac cagctatcag caaaaacata attgggcaaa tggtgaacaa
     9901 aaccgagacg ggcataatag taactacagc aataaccacg gtgttgaagg gcagacagca
     9961 gatgaattgg taaaaaaaca gagagaaatc accgcttgta gtttgcttgc tacgctcttt
    10021 ttatcggctg gtgttccaat gcttttagcc ggtgatgaaa tcggacatag tcaacaaggt
    10081 aacaataata gttattgcca agataatgag atcacttggc tagattggga aaatatgaat
    10141 cacacacggc tggattatgt tcgtagttta atccggttgc gtaaaaaaat cgctttgctt
    10201 tccaagcaga ataattggtg gcaagaggat tcggtacaat ggttgaatcc ttctgctcag
    10261 ctaatgaata ttgacgattg gcataatcaa cataatgggc ttgtcgtttt attacaggaa
    10321 gaatggctgc ttttattcaa tgctaatcga caacctcaac cgtttttact gccacaaggc
    10381 aactggaaag ttgtgttgga gcaggctcaa ggtattttga tgacagacac gcaagcggtt
    10441 acgctcaata atatgggtgt atgcgtactt caaaaaagtg atgtaatgtt cgctaataaa
    10501 ttggagacac aatatgctta accaagaatc aacggctctt gttgcaagac aagatttaac
    10561 caacgatacc ttagtattaa ttcttgcagg aggacgaggt tctcgcctat acgaattaac
    10621 cgataaacgt gcaaaaccgg cagtctattt cggtggtagc cgccgtatta ttgattttgc
    10681 gttatcaaat tgtattaact cgaatttatt aaaaatcggg gtgattaccc aatatgcagc
    10741 acactctttg ttgcgccatt tacaacgtgg ttggtcattt ttaccttatg aacgtaacca
    10801 atatattgat atgttaccgg cacgccaaca gctagatgaa aacacttggt atcgtggcac
    10861 agcggatgcg gtgtatcaaa atatggcgat gatgaaatcg cactatagac caaaatatgt
    10921 ggtgatttta gcaggggatc atatctataa aatggactac actcaaatgc tgaaagatca
    10981 cgtcgatcaa ggtgcaaaat gtactgtagg ttgtatcgaa gtgcctcgct cgcaagcaac
    11041 agagtttggg gtaatggcgg tgaatgaaaa gctgaaagtg aaagagttcg tcgaaaaacc
    11101 agctgatcca cctgcaatgc cgggaaaacc ggattcctcg ctagcatcaa tggggattta
    11161 tgtatttaat gcagattatc tatatgaaat gctggaaaaa gaagcctcta caccgggaac
    11221 ctcacatgat ttcggtaaag atattattcc aaaagcagta gagcaaggtg tgctatatgc
    11281 ccacccattt gaacgttctt gtaaagggcg taatgccagt ggggcaattt actggcgaga
    11341 tgtcggtacg attgacagct actgggctgc ccatatggat ttagtttctg aagatccgga
    11401 attagattta tatgatgaat cttggccgat tcacggtcgt ccgcaacaaa ctgcaccggc
    11461 acgttttttc tataatcgtg cgcgtgccag aaccctagat aactcactga ttgcgggtgg
    11521 ttgtgtgatt accgatgcgg aaatcagtaa ttcggtctta tttaaccgtg ttcacgttga
    11581 agcggagtcg gtgattgaac acacagtgat tttaccgcag gtgactatcg gtaaaaattg
    11641 cgtaattaag cgcgctgtga ttgacagaca ttgtgtaatt cctgatggct tagaaattgg
    11701 tgtaaatgcc gaagaagatg cgaaacgttt tcgtgtcagc aaaaatggca ttgtattagt
    11761 gacacagtca atgttagata aattagcggg aaaagaagct aattcggata ttaaatatac
    11821 aatttagtaa gagatgatat aatgcttcga gtttgtcatt tgaggtcgca agctcgaagt
    11881 attgttatga ttaaagcgct tcaagcggtc ttatttttca actattttac acatagaaaa
    11941 cggttaaaaa tgaaagtttt acatatttgc tctgaaatgt accctttaat taaaacaggc
    12001 ggtttagctg atgtaatggg ggcattgcca tttgcgcaac agcaagctgg taatgatgtc
    12061 agagtgttaa ttccttatta cccgaaagtc gcgcaaactt taggggaaac ggtagaagtt
    12121 gctactatcg gcacttttgc cggaacagtc tctgttcgat ttgcttattt taatggctta
    12181 ggcgtttacg ttatcgatgc gcctcattta tttatgcgtg atggtaaccc ttaccacgac
    12241 agcaattatc aagactatcc ggataactat aaacgctttg ctttattagg ttacattggg
    12301 gcgcaattag cccaaggttt ggatcattgg tggggaaccg ctcaagtttt acacgcacac
    12361 gattggcaag cagggcttgc ttgtgcatat cttaaaagtt ggggaagcaa tgtaaaaacg
    12421 ctcttcacta ttcataatat tgcctatatc gggcgcttta atgccttcca tttagcagag
    12481 cttggcttac cttgggaatt tttccacgcc gaaggcttag aattttacgg tgaaatttct
    12541 tacctcaaag caggtttgta ttttgctgat cgcattacta ccgttagccc gacctatgct
    12601 cgtgaaatta ctgaggaaat tgccgctgca ggcttgcatg gtttactggc aacccgtcaa
    12661 tatcaaggta gattgcgtgg cattttaaac ggggtcgatg ctgaggtgtg gaatccggaa
    12721 acggatacac atattgtggt gaattatcgt gcgaactata tgcacggtaa agccaaaaat
    12781 aaagcggaac tccaacgaat ttttggtttg ccagaagaca aagaagcatt attgatggta
    12841 atggtgactc gtttaactga gcagaagggg gcagatttct tactcgccaa tatagatacc
    12901 ttaatgcaac ataaggtaca gattattgta ttgggaagtg gatcgccaga tttagaaaat
    12961 gcgctacgtt atttccaaca caaatacccg aaccaaattg gggtgaaaat cggttatgac
    13021 gaggctttat cgcaccaaat tattgcaggt ggtgatctga ttctagtacc aagccgtttt
    13081 gagccgtgcg gattaactca actttatggg ctgaaatatg gcactttacc gctggttcgc
    13141 cgtaccggtg gcttagctga tacggtggta gatagccata aagagagcat tgaaaaccgc
    13201 agtgccaccg gatttgtatt tgattaccca gatgcacctg cgtttttaga ggcagctatg
    13261 cgggcaatca gcttatggca gaaacaaaaa ttgtggtcga gcgttcgcca gaatgccctt
    13321 gctcaagatt ttggttgggc aaaagtggca gaacagtacc aaaatttata ccacgaaatt
    13381 atttaatttg tattcacaac atcatttcaa gcggtcgaat ttgcggattt ttttgtaaaa
    13441 acgaccgctt gcaatattaa aaattaggag aatttactca atgagcaggc agtcattaag
    13501 cccagaaatg atcaaaaatg ttaaaaatgc gattttgcac aaaatggtgt tcgctttagg
    13561 ggtcgaaccc cgtgatgcca gtaagcgtaa ctggctcaat gcaaccttac gtgtagtgcg
    13621 tgatttatct accgaagatt ggttacaaac ccgccgtagc caggttgcaa atggtagccg
    13681 ccgtgtttat tacctttcaa tggaattttt aatggggcgt acgttcagta acgcaatgat
    13741 ttctgaaggt gtgtatgagc ttattggcgc tgcgttaaaa gagttagggc aagatctgga
    13801 agagattatc aatgaagagg gcgtccgggc ttaggtaacg gtggcttagg gcgtttagcc
    13861 gcctgctata tggacagcct tgccacaatg aaaattccgg caatcggcta cggtattcaa
    13921 tatgaatacg gtatgttccg ccaagaaatc cgcaacgggg agcaaattga gcaacctgat
    13981 gaatggttag agaatgaatt tgtgtggcca tatctacgtt caagtaagcg tttcccggta
    14041 cgctttggcg gtaaaacttg gcgtgagggc aaaaaagtag tatggcagcc ggaagaagaa
    14101 attaccgctc aagctcacga ccaactgatc ccgggctttg agaccacctc aactaacagc
    14161 ttacgtttat ggtctgcaca cgcatcgggt agagggtttg gcttatctga ttttaaccgt
    14221 ggcgattatt ttgcagcaat ggttaaacaa aacagctcgg aaaacgtctc tcgtgtgctt
    14281 tatccggacg attctaccta taacggtcgt gaattacgct tacgccaaga gtatttcctt
    14341 tgctcggcat ctgtacaaga tattatccgc cgccacgaag cggagttcgg ctcttgtgtg
    14401 aatttagccg acaaagtggc aactcactta aatgacacac acccaaccct tgcggtgcct
    14461 gagttaatgc gtattttaat tgacgaaaaa ggctatggct gggaacaagc gtgggcgatg
    14521 actcgtaaaa ttttcttcta caccaatcac actttgatga gtgaagcgtt agaaacttgg
    14581 ccggtagaaa tgttagcccg tgtgctacca cgccatttag agattatttt cgacattaac
    14641 gaatatttct tagaggaagt gcgtagccaa ttcccggaag atcacgattt gatttctcgt
    14701 gtttccttaa ttgatgaaca aggcgatcgc cgtgtgcgta tggcgtggct tgcggtagtc
    14761 gcctcagcga aagtaaatgg tgtggcgaaa attcactcgg atttaatggt tgaatctatt
    14821 tttgccgatt ttgcccgtat ttacccaaat cgttttacta atgtgactaa tggggtgaca
    14881 cctcgccgct ggatcaaaat tgccaaccca gggcttgcta atattttaga taaatgtatc
    14941 ggcaataagt ggctgactga tttaagtgaa ttggaaaaat tcaacgtgtt tgttgatgat
    15001 gctgatgtgc aagcacaggt ggcagcggtg aaagtagaaa acaaacgtcg cttagccaaa
    15061 tatgtcgaag aaactcaggg aattaaactt aatcctgaag cgatttttga tgtacaagtt
    15121 aagcgtattc acaagtataa acgccagcaa atgaacgtgt tgcatatcat cacgctttat
    15181 aaccgcatct tgaaaaaccc gactgctgat tggacacctc gtgtgtttat cttcgcaggg
    15241 aaagcggcaa gtgcttatta tgcggcgaaa aaagtgattc gtttgattaa tgatgtggca
    15301 aatgtggtga ataatgaccc tcgcattaat gatttaatta aggtggtgtt tattccgaac
    15361 tacggtgttt cattagcaca aatgattatt ccggcagctg atgtttcaga gcaaatttcc
    15421 ttagcgggta cagaggcctc cggaacctct aatatgaaat ttgccctcaa tggtgcttta
    15481 accattggta cattagacgg tgcgaatgtc gaaattttag atcacgttgg taaagagaac
    15541 atctttattt tcggtaatga agtagagcag gtggaagagc ttcgccacaa cggttactca
    15601 ccgtatcact actacgaaaa agacagcgaa ttgaatgagg caatttcaca aattctaaac
    15661 ggtaaattct caccggaaga tccgtatcgc tatcaagatt tgatcttaaa ttcaggtgac
    15721 tactaccaag cctgtgccga ttatcgtagc tatgtggagg ctcaagaaaa agtggctcaa
    15781 gcctatcgta acaagaaagc ttggacacgt tcagccatca tcaatattgc caatatgggc
    15841 tatttctcct cagaccgctc ggtgatggat tatgcgaaaa atatttggca tatcgaaccg
    15901 atgagcgaag aacaattaaa aggcgattct acaatgggca gtattattga aagttcaaat
    15961 aaactgttga atttaaaata atgatttaga gaaaacggta agagtaatct taccgttttt
    16021 gttttagtca gggattttgc aaatttctac taaaaattaa ccgcttgtca atttgccttc
    16081 tccaccgccg tgagcattcc cctcagtaaa ttcagctcat tagtttccag ttcggcacgt
    16141 tggtataaac ggcggagttt tagcatcact gaatcattgc ggataaagcc taattcggta
    16201 tataagcgtt cggtgtgagc aaagaaatgc tctaaggctt gagcggttgg gtaatcctta
    16261 tctgctgcaa gcggttgttt ttcgccagaa ttttgcaaat aagccattcg gatttcataa
    16321 cttgcgagct gtactgccat tgccaaattc agagaaccat aatcaggatt ggttgggaaa
    16381 ttcaaatggt actggcattt caataattct tcgttggtta gccccactcg ctcacgtcca
    16441 aatacaatcg ccactttgcc aagattggtt cgatttacca ctaattcacc acagtctctt
    16501 ggttcaatca gggtattttg caaatggcga agtctggcac tggtgccgat caccagttgg
    16561 caatcggcaa tggcttcatc gaaagtggcg tagcattgag cgttatccaa cacatctttt
    16621 gccccagcag caagggcttc ggcttgttca tcaagcggtt gttttggggc gactaatcgc
    16681 aaatgggtta agcccatcgt tttcattgct cgggctgcgg aaccgatatt tgccgggagt
    16741 gaagtttcaa caagaatgat ctgaatttgg ttgagaatct gcattggttt tgtttctttt
    16801 ttgttaaatt tagcctgtta atagtgtagc aaaaatttag cctgcttaaa atttgaaaaa
    16861 atgggaaata atcggtttaa ttgggcataa ttttttacct atttgtttta tttagtggta
    16921 catttagagc gtttttaatc acaacaacca tacaggagtc tttatgctta ttggtgtacc
    16981 aagagagctg ttagacggtg aaactcgagt ggcggcaacg ccaaaaaccg ttgagcagat
    17041 caaaaaactt ggctttgacg tacttgtgga acaagacgca ggttttaaag ccagttttga
    17101 agataataca tttttaaatg caggtgcaaa tatcggcaca caacaagaag tttggaatgc
    17161 agacattatt tttaaagtga atgcgccgac agaagctgaa attgagttaa tcaaagaagg
    17221 ggtaacctta gtcagcttta tttggccggc acaaaatcca caattgatgg aaaaattgca
    17281 gtctaagaaa attaatgtgt tggcaatgga cgctgtgcct cgtatttccc gtgcccaagc
    17341 tctcgatgct ttaagttcga tggcaaatat ttcgggttac cgtgcggtga tcgaagcggc
    17401 aaacgctttt ggtagcttct ttactgggca aattaccgca gcaggtaaag taccaccggc
    17461 aaaagtgttg gtaattggag ccggtgttgc tggcttggct gcaatcgggg cggcaaatag
    17521 cctgggggcg attgtgcgtg cctttgactc tcgtcctgaa gtaaaagagc aagttaaatc
    17581 aatgggggct gatttcctcg aaattgattt tgaagaagaa ggtggctcag gtgacggcta
    17641 tgcgaaagtg atgtcggaag agtttaaccg tcgtgcaatg gcgttatatg ccgagcaagc
    17701 caaagaggtg gatattatta ttaccaccgc tgccattccg ggcaaacctg ctcctcgttt
    17761 aatcactaaa gagatggttg attcaatgaa accgggttca gtgattgttg atttagccgc
    17821 tgcaaccggt ggtaactgtg aatacaccaa agccggcgag attgtggtga ccgataatca
    17881 agtgaaagtg attggctata ccgattttcc tgcacgttta ccaacgcaat cttcgcaact
    17941 ttatggtact aacttggtga atttactcaa actgttagca ccaaataaag atggtcaaat
    18001 tgagattaat tttgatgatg tagtgttgcg tggcgtaacg gtggtgcgtg acggcgaatt
    18061 aacttggccg gctccgccga ttcaagtatc tgcccaactg caaaaacaag cagccgcacc
    18121 acaagcggtc aaaaaagagg aaaaacctgc agaccctcga gtgaaatatg gcgtgatggc
    18181 agcagcaggt gtgctgttcc tatggcttgc atctgtggct ccggcagcgt ttttatcgca
    18241 ttttaccgta ttcgttctcg cttgtgtggt agggtattat gtggtttgga acgtcagcca
    18301 cgcactacat accccattaa tggcggtaac aaatgcgatt tcagggatta tcatcgtagg
    18361 tgcggtatta caaattgccc aaccgaccgg taatttcttt attgatattt tggcatttat
    18421 tgcgattttg gttgccagca tcaatatttt tggtggcttt aaagtaacgc aacgtatgct
    18481 tgcaatgttt agaaaaggtt aaggagaaac gaaactatgt cttttggatt tgtgactgct
    18541 gcgtacatta ttgcagctat tctctttatt atgagcttag ccggtctttc taaacacgaa
    18601 accgccaaag caggttgttg gtatgggatt gtgggtatgg cgattgcttt agtggcaacc
    18661 attttcggcc cgcaatcaca tggcacgatt tggatcttaa tcgcaatggc aatcggtgga
    18721 ttcatcgggg tgaaaaaagc cctaaaagta gaaatgaccg aaatgcctga attagtggca
    18781 attctacaca gctttgtcgg tttagcagcg gtattggttg gttttaacag ctacggactt
    18841 cataccaatg cattaatgcc tgcaaattta gatgaaactg cacaagcggc atttttagcg
    18901 gaacaagcca ctcttgccaa tatccacaat gtggaagtgt tcttaggtat tttcattggt
    18961 gcggtaacct tctccggttc attggttgcc tttggtaaac taagcggtaa attatttggt
    19021 cgtaaagtct cttctgcagc actgaatatt ccacataaac acaaatggaa tttggcagcc
    19081 attatcgttt ctgttttttt gatgatcgtg tttttaaata atccgcacaa tatcttccct
    19141 gtgctgatta tgacaattat tgcgttagtc ttcggctggc acttagtttc ttctattggt
    19201 ggggcggata tgccggtggt agtttcaatg ctgaattctt attcaggttg ggcagccgca
    19261 gcggcaggct ttatgctaag caacgattta ttaatcgtaa ccggtgcatt agtgggatca
    19321 tcaggtgcta tcctttctta tattatgtgt aaagcaatga accgctcatt cattagcgtg
    19381 attgccggtg gttttggcaa tgaagttcag tctggcaaag gtgatgaaga atacggtgaa
    19441 caccgtgaaa cgaaagccga agaagtggca gaaatgctga aaaatgcaag ctctgtgatc
    19501 atcacgccgg gttatggtat ggcagtggct caagcacaat atccggtagc ggaaatcacc
    19561 gcaaaattgc gtgaaaaagg cgtgaatgtg cgttttggta ttcaccctgt ggcagggcgt
    19621 ttaccggggc atatgaacgt attattggcg gaagcgaaag taccttatga tgtagtgctg
    19681 gagatggacg aaatcaatga cgattttgaa gaaaccgatg tggtattggt aatcggtgca
    19741 aacgataccg taaaccctgc tgcattagac gacccatcaa gccctattgc tggaatgccg
    19801 gtgcttgaag tatggaaagc acaaaatgtt atcgtgttca aacgttcaat ggcagtaggc
    19861 tacgccggtg tgcaaaaccc actgttcttt aaagaaaata cccaaatgct atttggtgat
    19921 gcaaaagaac gtgttgatga tattttacgg gcgttaaatt aaatttaaat aaaaaagcga
    19981 acataagttc gcttttttgt gcttaggcta acataaattg ttaatttttt actctaatac
    20041 catcaatccg ggaagagtcg caaaactctg cgattttacg gtatcatgga aatcatctaa
    20101 gtaggctagg gtagcatcgg cttctcgaat agcgccataa agggtgctat atagtccttg
    20161 ctgagttatt tttcttgcca ccacataccc cctatctaaa tatggtttaa ccgcccaata
    20221 aggtagtgca gcaatgcctc gccgacttgc tactagctga ataatagcaa tagttaactc
    20281 actattacgc cgagtaactt tgatgccagc agggcctaat atttttcgca gtaaatctag
    20341 catatcatca ggtactggat aggtaattaa tgtctcatct ttaaaatctt cagcttccca
    20401 tacatctttt gtggcaagag ggtgatcttt agagcaaata gctaccattt catatgaaaa
    20461 gagaggtttg tatataatac cagcactatc ttcctcttca gcgacaattg ccagatctgc
    20521 acgatggctt aatagcaaac caaccgtatc agtatggaaa cccgatacga tatctaattc
    20581 aactagaggc caatgttgac ggaaagtatc cattgccggc attagccaat caaaacaggt
    20641 atggcattct actgcaacac gtacctctcc gacttctcct tgtttcactc gggctaaatc
    20701 taattcagcc tcaatgactt tgggcaaaat atcgtaggcc aacttaatta aacgttcgcc
    20761 agctggtgta aagcgaatag gggagctttt tcgctcaaat agcgtaagat catactgttc
    20821 ttccagtaat tttatttggt gtgaaagtgc ggattgtgtt aaatggacac gctttgctgc
    20881 aagagatacg ctaccgctct cttttaatgc gattaatgtc cgcaaatggc ggatttcaag
    20941 aaaaatcggt ttcataattt attcatctaa aagtgaaaaa agatgaaaat aattataaca
    21001 aacaagcggt caaattctgc aaaaaatttg caaaatccaa ccgcttgtat agagcagtgg
    21061 cgaattattg ggttaattga actaaaatgc ggcgaacagg ctctgctgca ccccataata
    21121 attggtcacc tacggtaaat gcagctaagt attctccacc catcgctaat ttacgcaagc
    21181 gaccaaccgg cacgctcaat gtaccggtca ctttcgccgg ggtcaattca cgcaatgtgg
    21241 tttctttgtc gtttggaatt actttcaccc attcattgtg ggcagcaata atttgctcga
    21301 tttccgctaa cggaatatct tttttcagct taattgtgaa tgcttggctg tggcagcgta
    21361 atgctccaat acgcacgcat aaaccatcaa ctggaattgg gttatcgctt aaacctaaaa
    21421 ttttattagt ttctgcataa cctttccact cttctttagt ttgcccggtt tccggtaata
    21481 atttatcaat ccaaggaatt aagctaccgc ccaatgccgc accgaagttc tcggttggga
    21541 agtcttccgc acgcatttta gccgtaactt tacgttcaat atctaaaata gaagaggcag
    21601 gatttgctaa ttcagctttt acgctatctt ctaattcacc catttgagaa agcaattcac
    21661 gcatattttt cgcaccggca ccggaagcgg cttggtaagt tgctacagaa acccactcga
    21721 ctaaatcttt ctcaaataaa ccaccgatag ccattagcat taggcttacg gtacagtttc
    21781 cgcctacaaa tgttttaatg ccgtttttta agccttctga aatcacatgt tggttcaccg
    21841 ggtctaatac gataatagca tcgtctttca tacgtaatgc agaagccgcg tcaatccaat
    21901 agccgttcca accggtttct tttaattttg gatagacttc atttgtataa tcaccacctt
    21961 ggcaagttac gataatgtct aattttttta attcttcaat gtcaaaggcg ttttttaatt
    22021 cgccggcatc ttttccgcca aaaacagggg ctttttgacc cgcttgtgaa gtagtgaaaa
    22081 aaacagggtt gatattggcg aagttatttt cttcaaccat acgatccatt aagaccgaac
    22141 cgaccatacc acgccaaccg ataaaaccta cattttgcat tgtgtttgct cctaaaaatg
    22201 atgttata
//
LOCUS       DANLZQ010000028        22015 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.028, whole genome shotgun sequence.
ACCESSION   DANLZQ010000028 DANLZQ010000000
VERSION     DANLZQ010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 22015)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22015)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22015
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.028"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(163..834)
                     /locus_tag="PXE50_001009"
     CDS             complement(163..834)
                     /locus_tag="PXE50_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HDL5621935.1"
                     /translation="MLQAIIFDMDGVIVDTEYLEFSLQKQFIEDIKEHSRPITLEQQS
                     EVVGKCLKEIPVIIKKLSESSLPIEEIRARYYAFFQDLFSKVDFKTIFRADIQQIIQF
                     AKQNQIKLAVASSSALSHIENILTVCGIKDEFDLIVSGEQFEHSKPDPTIYRYTCEKL
                     GVEPQNAVAIEDSYYGMLAAKTAGLTVIGYEEKRILIDQSLADYMGKDMKEILKILQK
                     CNTPS"
     gene            complement(955..2418)
                     /gene="guaB"
                     /locus_tag="PXE50_001010"
     CDS             complement(955..2418)
                     /gene="guaB"
                     /locus_tag="PXE50_001010"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005725353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HDL5621936.1"
                     /translation="MLRIKQEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPM
                     LSAAMDTVTETKLAISLAQEGGIGFIHKNMSIERQADRVRKVKKFESGIVSEPVTISP
                     DMTLAELAELVKKNGFAGYPVIDENQNLVGIITGRDTRFVTDLSKTVREFMTPKDRLV
                     TVKENASREEIFHLMHEHRVEKVLVVNNEFQLKGMITLKDYQKAESKPNACKDEFGRL
                     RVGAAVGAGPGNEERIDALVKAGVDVLLIDSSHGHSEGVLQRVRETRAKYPDLPIVAG
                     NIATAEGAIALADAGASAVKVGIGPGSICTTRIVTGVGVPQITAIAEAAAALKERGIP
                     VIADGGIRYSGDISKAIAAGASCVMVGSMFAGTEEAPGEIELYQGRAFKSYRGMGSLG
                     AMSKGSSDRYFQSDNAADKLVPEGIEGRIAYKGYLKEIIHQQMGGLRSCMGLTGCATI
                     EELRTKAEFVRISGAGIKESHVHDVTITKEAPNYRMG"
     gene            complement(2646..5813)
                     /locus_tag="PXE50_001011"
     CDS             complement(2646..5813)
                     /locus_tag="PXE50_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HDL5621937.1"
                     /translation="MKFTDIFIKRPVLAVCISLLITILGLQAIEKLQVREYPEMTVSI
                     VTVSVNYSGADARLMQTLVTSQLEEAVAQADNIDYMTSSSSPSTTTVTAKMKLNTDPN
                     AALSDISAKVNAVRSNLPSGIDDPSIRVSTGSNDALMYIRFVSDELNTSQVTDYINRV
                     VKPQFFTVNGVSSVDVYGSVFGLRIWLDPDKMASNNLSGAAVLSALSANNLQTAAGNS
                     NGYYTVYRNKVLSTTPSVTELEEVTVSTTKDGKTIKLKDIATVELDKYQDAARATVGG
                     KDAVVLAVSVAATANSLTVAKDIYPMFEQVLKNLPSTIQGDIVYDKTIAIDSSIKEVI
                     KTIGEATVIVLVVIILFLGSLRAMIVPVITIPISLIGVLFFLQMFGFSINLLTLLALV
                     LAIGLVVDDAIVVLENVERHVKEGKTPFDAAIIGTREIALPVISMTITLGAVYSPMAL
                     MTGVTGTLFKEFALTLAGAVFISGIAALTLSPMMSSRILKEHKEGEESAFARVVHRSL
                     DKMTSCYTNMLSGIMAVRGFVLFFAVLIFASLPMLFGSLSSEVAPTEDRGFVVGISNG
                     PSNTNLDYTEAALAQFNQEVTKLPEVSSLMTVSGFNGANSALSIIALKDWNDRSRERA
                     AISNDVAAIGKKVVGMDVNAIAFPEISTGENGLPFSLVITTADSYEKLAIVASEFLKK
                     AQTSGQFFFANLDLKFDTVTMNMKFDREKMGAYGVTMQQVSGTLGAFLSGAIITRVDI
                     DSRAYPIVSQAVRNDRLNPEDLMNYYVTTATGQSIPLGSFVTMELKTSPSSLPRMSQL
                     NSATIGGVVSGSIGDAVNWAKAELDRTLPSGYQYDFRGESRQFVQEGNAMAMTFALAV
                     IIIYLVLAIQFESWRDPLVILVSVPLAVSGALLVMNIPTAMKGLFMGIAAGTGSKDMM
                     AFANGIWTAGYTLNIYSQVGLITLVGLITKHGILMCEVAKEEQLLHGKSRYEAIFHAA
                     TIRLRPIMMTTAAMIAGLIPLLFAVGAGAIARFSMGMVIVAGLAIGTLFTLFILPVIY
                     TFLGQEHKPLREFDEEKYFPTTKEA"
     gene            complement(5827..7032)
                     /locus_tag="PXE50_001012"
     CDS             complement(5827..7032)
                     /locus_tag="PXE50_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDL5621938.1"
                     /translation="MTTETQKLGKGRKFLIVLTLLIVLIVFAAIVGLQKIGAMKKAEA
                     AANMPEAVSEVTAMQVTTQEWTPTISAVGYIRPNQGAMLSAETSGVVSRVLVTSGQRV
                     KKGDLLVEFDSSVEIANLRASEAQLPNAKANLERYRNLIASNSASKAEFDNAQSTYNQ
                     LLANIEALRATIKRRQIYAPFSGLAGIVNVNVGQYITMGTEIVRVEDQSSMKVRFTLP
                     QTNLEQISIGQKVTAVIDALPAQTFPAKIVAIDPAVDRLTGLINVEAVIEEGQEKLLS
                     GMFARLNVALPTETGQIVVPQISIAYTMYGETVYVLQPLSDEDKEMVNKMAVQNPSLD
                     VNKMYRAKQMEVKTADRKGNYSQLSKGVKAGDLIVTGGLQRLSNNALVKVSDTEAVGI
                     TTPAKNSKL"
     gene            complement(7063..7635)
                     /locus_tag="PXE50_001013"
     CDS             complement(7063..7635)
                     /locus_tag="PXE50_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDL5621939.1"
                     /translation="MSRRSEPKEEMVNRILSATESLIVQEGLQNLSMRSIAKEAGIAS
                     GTLYLYFKTKDDLLHSLAAQLLECYNGYMHFEFKPEMALFEQYKALVNKKWQFLIERL
                     DLVKQFQAVIGIDELIRETIADETSFWNKLILEGKKQRIIADLSNELLYGLSIGTLVD
                     IQYLQNLNQENQFDGYLDEIILRTWKAITF"
     gene            7874..8095
                     /locus_tag="PXE50_001014"
     CDS             7874..8095
                     /locus_tag="PXE50_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1414 domain-containing protein"
                     /protein_id="HDL5621940.1"
                     /translation="MATKSKYHTKQFEQLLADLIATIEKHKAPVDLSLMALGNMITNI
                     LIENIQSPAQREALADAFADALKQSLKTK"
     gene            8100..9833
                     /locus_tag="PXE50_001015"
     CDS             8100..9833
                     /locus_tag="PXE50_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3413 domain-containing protein"
                     /protein_id="HDL5621941.1"
                     /translation="MFARLRSLLPTNSRQYREETSQKITWGHWFALFNIVLALLISSR
                     YAFNADWPNTLVGKLYFFVSLFGHFSFVVFAGFLLILFPLSFIVKNHRTYRGLSVILA
                     TIGQTVLLVDTEVFKQFYLHLSPLVWDLLVNPEEGELTRKWQLLFVPMPLLLLAEMLY
                     SRWCWQKLRSFSRQKWGKYVALFFVISFTATHLIYAWADMNAYRPITAQRANYPLSYP
                     MTARNFLEKHGFIDRVEFNQEIEESGRLDTFYLNYPKSPLIATKTPSTNILLINLSGL
                     SKQIINAETMPKLTEISQQSHRFMQHYSSGDSASAGALGLFYSLSGKYLDSVLADKTV
                     SPLIEIARKSDYQLGLFSHNGFADPIYHQAIFSGILLPTAHSNVGAIGQWKNWISSRS
                     LENPFFSYLDLRMPFAHTAQEQAKLLDWQFAEIWQHLTQNALLANTLVIITADISNEV
                     GAENSFDKQHIQVPMMFYWQGESKEYHFLSSHLDIMPTLLSQFFGVQNPLNDYAQGMD
                     LSTQNQRLWVSSSNHKWNVAIMPNGDQYQIDRKGNFKHFNSNGEHEKDARPPLALFLQ
                     MIQQSNQFIEK"
     gene            complement(9900..10601)
                     /locus_tag="PXE50_001016"
     CDS             complement(9900..10601)
                     /locus_tag="PXE50_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5621942.1"
                     /translation="MIGQALGWRATFGIIGIIALIVLMMIWRLLPYLPSKNAGSIKSL
                     PLLFKRPMLIGIYLLVALIVSGHFTAYSYIEPFMIKISSVSVENTTFILLVFGLAGVV
                     ASFLFGRLYGKAPNKFILSGIAIIMCSQLCLLFLSDSTVAMFMVAFVWGIGITGMSIA
                     LQMKVLELAPDATDVATAIFSGTYNLGIGGGALLGSIAIQQLGLANIGFAGGSIAFVA
                     MVWFVFVSLKYRQLR"
     gene            complement(10598..10978)
                     /locus_tag="PXE50_001017"
     CDS             complement(10598..10978)
                     /locus_tag="PXE50_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5621943.1"
                     /translation="METLAIFLFSEIWKFDFVFTFIFKILKINVFFSDLINMKLARKA
                     QRRLSFLRVFSLAFAAFIVNTTEFIPIALLSDIASSFQMEPSSAGIMMTVYAWVVFLL
                     SLPLMLLTANMERKRLLLMLFMGE"
     gene            complement(11020..15480)
                     /gene="mukB"
                     /locus_tag="PXE50_001018"
     CDS             complement(11020..15480)
                     /gene="mukB"
                     /locus_tag="PXE50_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukB"
                     /protein_id="HDL5621944.1"
                     /translation="MIDTTELQNNPQIAPLARPNDVQRGKFLSLTLINWNGFFARTFD
                     LDDLVTTLSGGNGAGKSTTMAGFVTALIPDLTLLNFRNTTEAGSTAGSRDKGLYGKLK
                     AGVCYAVLESFNSRGQRIITGVRLQQIVGRDKKVDIRSFSLQNIPQEQSIISLLTEQV
                     GNKARVLALNELKDQFENSEVQFKQYHSITDYHSFMFDLGVIPKRLRSAADRSKFYKL
                     IEASLYGGISSVITKSLRDYLLPENTGVRQAFQDMESALRENRMTLEAIKVTQSDRDM
                     FKRLITESTNYVSADYMRNANERRGNVQQALEQRKEWYAAKSKILLEQQRFVEFSRES
                     ADIAEAELALEADYNSANDHLNLVMNALRHQEKIERYQDEVEELNIKLEEQQEALEEI
                     AEIAENAQARADEADDHVEELRSQMADYQQALDAQQTRALQYQQAVNALEKAKQLTGL
                     VNLDLNNIEDYHAEFVAQAEDLTDQVFELEQRLSVSDMAKTQFEKAFELVCKISGEID
                     RLQAWEEARALLSAFPEQKMQAQQAVSLRQKLNDLEQRLQQQQNAQRLVAEFNQKSQQ
                     QLNSAEELDAYFEEQQARLEDLEAELSDFVEQRSTQRQQREQLNQQYQQLAKNAPAWH
                     TAQSALTRLEEQCGEKFEASQSVMQFMQNMLSKEREATLARDELARKEQMLDEQINRL
                     SQPDGSEDARLNQLAERFGGVLLSELYDDVSIEDAPYFSALYGEARHAIVVRDLEAVK
                     TQLEKLDDCPSDLYLIEGDPSAFDDAVFSAEELGEGVVVKVSDRQWRYSKFPEVPLFG
                     RAAREKHLATLKAERDETAEKHAERAFDVQKCQRLHQHLSQFIGTHLNLAFQENPEML
                     MQEIAAERAEIERELAQSAGNEQQLRHQLESVKAQLQMLNKILPLANLLADETLEARA
                     EECREQLELAEEDEMFIRQFGATLSQLEPIAAALKSDPALFEQLEADYRRSVAEQKVL
                     QQKVFSLADVMNRRLHFSYQETVGTEGSALTEQLRQRLENAQREREQARDQLRQAQAQ
                     LSQYNQVLTGLRSSYEAKNQMLQELIREIDDLGVRGDSGAEERARFRRDELQQRLSQQ
                     RSRKGYLDKQIAVIEAEMDNLNRTLRKAERDYHTQRELVVQAKASWCIVQRLSRNSDV
                     EKRLNRRELAYQSAEELRSISDKALGALRTAVADNEYLRDSLRASEDSRKPENKVAFF
                     IAVYQHLRERIRQDIIKTDDPIDAIEQMEIELSRLTNELTGREKKLAISAESVANILR
                     KTIQREQQRILQLNQGLQNIAFGQVKGVRLVVNIRDTHAILLNALSNNREEHKDLFDS
                     QKLSFSEALAMLYKRVNPHIEMGQRTPQTIGEELLDYRNYLDLEVETFRGADGWMRAE
                     SSALSTGEAIGTGMSILLMVVQSWEEEARRMRAKDILPARLLFLDEAARLDATSINTL
                     FELCERLDMQLLIAAPENISPERGTTYKLVRKITNNQEYVHVVGLKGFAK"
     gene            complement(15656..16372)
                     /gene="mukE"
                     /locus_tag="PXE50_001019"
     CDS             complement(15656..16372)
                     /gene="mukE"
                     /locus_tag="PXE50_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukE"
                     /protein_id="HDL5621945.1"
                     /translation="MTENIQDFISPKLALAIANPIFPELDSQLRAGRHINTEQLDQHV
                     FLMDFQAELESFYRRYHVELIRAPEGFFYLRPKASTLIARSAMSEMEMLVGKVLCYLY
                     LSPERLAQQGIFSQDDVYEELLSLADESKLLKAVNPRSTGSDLDRAKLAEKAGGALRR
                     LARIGIITRVGEQNSKKFVISESVFRFGADVRTGDDPREAQLRLIRDGEATTPALLNE
                     QAVEIDENIADEAPFDGENE"
     gene            complement(16421..17764)
                     /gene="mukF"
                     /locus_tag="PXE50_001020"
     CDS             complement(16421..17764)
                     /gene="mukF"
                     /locus_tag="PXE50_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukF"
                     /protein_id="HDL5621946.1"
                     /translation="MQNELAQTIPELISWTKDREFSLSLSSDRLAFLLAISIYNQEQT
                     DGELLESDLIDLFRYVSNSFEQSDATFTQRANNAINDLVRQRLLNRFSSEFTEGLAIY
                     RVTPLGVGISNYYVRQREFSTLRLSIQLSIVADEIQRASVAAEEGIEQAQDERFWRNN
                     VFAPLKYSVAEIFDSIDLSQRIMDENQHQIRERIAELLSQNWHEAIMSCEQLLDETSG
                     NLRELQDTLNAAGDKLQAQLLRIQSCLMARNDLDFIDQLIVNLQNKLDRIISWGQQAI
                     DLWIGYDRHVHKFIRTAIDMDKNRVFGQRLRQSIQDYYNSPWLLYTAKADSLLDLRDD
                     EAMLNEAESVGELPSELEYESLSDVQEQIVSAMQAHLAPFRAEGKPIDLGVILREQLA
                     RFPESRHFDVARIIVDQAVKLGMASQDSQAVYPQWQPINEQGAEVQANVIDQYNK"
     gene            complement(18029..18916)
                     /gene="galU"
                     /locus_tag="PXE50_001021"
     CDS             complement(18029..18916)
                     /gene="galU"
                     /locus_tag="PXE50_001021"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HDL5621947.1"
                     /translation="MKVIIPVAGLGTRMLPATKAIPKEMLILADKPLIQYIVNECVAA
                     GFKEIVLVTHSSKNAIENHFDTSFELETMLEKRVKRQLLDDVRSIVPKDVTLIHVRQG
                     QAKGLGHAVLCGRTVVGDEPFAVVLPDVLLGEFTANQKTENLAAMVKRFQETGYSQIM
                     VAPVPMENVSSYGVADCHGVDIPLGGAAPIAKMVEKPSIEEAPSNLAVVGRYVFSSNI
                     WNLLEKTPVGVGDEIQLTDAIDMLIHQETVEAFHMTGRSFDCGYKVGYMKAFVEYSLN
                     HDKCGKEFKAFIKELAKSL"
     gene            complement(19052..19237)
                     /gene="csrA"
                     /locus_tag="PXE50_001022"
     CDS             complement(19052..19237)
                     /gene="csrA"
                     /locus_tag="PXE50_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HDL5621948.1"
                     /translation="MLILTRKIGEVLLVGDDVEITVLSIRGNQVKLGVNAPKEISVHR
                     REIYERIKASVEEENAE"
     gene            complement(19327..21954)
                     /gene="alaS"
                     /locus_tag="PXE50_001023"
     CDS             complement(19327..21954)
                     /gene="alaS"
                     /locus_tag="PXE50_001023"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HDL5621949.1"
                     /translation="MKTTSDIRQSFLEFFQTKGHTIVPSSSLVPENDPTLLFTNAGMN
                     QFKDVFLGLEKRPYSRATTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYF
                     KQDAIKFGWEFLTSPQWLGLPKEKLYVTVYETDDEAYDIWHKEVGVPSEHIIRIGDNK
                     GAPYASDNFWAMGDTGPCGPCTEIFYDHGPEHWGGLPGSPEEDGDRYIEVWNIVFMQF
                     NRLADGTMEKLPKPSVDTGMGLERMTAVMQHVNSNYETDIFQTLIKEVATLLNVKDLD
                     NKSLRVVADHIRACSYLIADGVLPSNEGRGYVLRRIIRRAVRHGNILGAKEAFFYKLV
                     PTLATVMGQAGEVLTQKQAHIQKTLKAEEEQFARTLERGLNLLEEALAKVENNTLSGE
                     VAFKLYDTYGFPLDLTADVCRERDIKIDEDGFNAEMTAQRERAKASSSFGTDYNNVIK
                     VDSKTCFSGYTETSLNDATVIGLFSNGKSVESIQSGENAVVILDKTPFYAEMGGQVGD
                     SGQISAEICNFEVVDTQKYGQVFGHIGQLTSGSLSVGDKVNTIVDRERRHAITLNHSA
                     THLLHSALRQVLGDHVAQKGSLVSENILRFDISQPEAITKSQLEEVERIVNAKVRENI
                     QVIIEEMDIESAKAKGAMALFGEKYGEVVRVVEMSDFSIELCGGTHVKQTGDIGLFKI
                     TSEGAVAAGVRRIEAVTGENAIAWLHTLQQAVQQSAELLKADSHSFVEKIVQLQEKAK
                     RTEKELQQLKDKLAAQAGSDLAKQATQINGVNVVIQQLENVEPKALRTMVDDLKNQLG
                     SAVVVFATTAEDKVNLIVGVTKDLTDKVNAGQLVGAMAEKVGGKGGGRPDMAMAGGSE
                     PQHLLQALSLAQEWITAKL"
BASE COUNT         6244 a         5056 c         4131 g         6584 t
ORIGIN      
        1 gcagataaag cgacgattga aattaaactt aattttttca ttctatttat cctattaata
       61 ttaaaatatc cactctcatt tctaggttac tcaagccgat agactgttcc aagtacttga
      121 agtagaaaca ttgacaaaat ttctataaaa atcgaccgtt tattaacttg gagtattaca
      181 tttttgaaga atcttcaaaa tctctttcat atctttgccc atataatccg ctaaactttg
      241 gtcaatcagt attcgttttt cttcgtaacc aatcaccgtt aagcctgcgg ttttggcggc
      301 gagcattccg tagtaggagt cttcaatcgc cactgcattt tgtggctcaa cgcctaattt
      361 ttcgcaggtg tagcggtaaa tggttgggtc tggcttgctg tgttcaaact gttcaccgct
      421 gacgattaaa tcaaattcgt ctttaatgcc gcaaaccgtg agaatatttt caatatgcga
      481 aagggcggaa gaagaggcaa ccgcaagctt aatttgattc tgcttggcaa attgaataat
      541 ttgctgaata tcggctctga aaatggtttt aaaatccact ttgctaaaca gatcttggaa
      601 aaaggcgtag taacgtgcac gaatttcctc aatcggcaaa ctggattcgc ttagtttttt
      661 gataatcacc ggaatttctt ttaaacattt gcctaccact tccgattgtt gttctaaagt
      721 aatcgggcgg ctgtgttctt tgatgtcttc aataaactgt ttttgtaagg aaaattccag
      781 atattcggta tccacaatca cgccgtccat atcaaaaatg atagcttgga gcatatagcc
      841 tcttttgtaa aattttaaga aaatctaacc acttattccc tctctctgtt ttaaattact
      901 gaacgtaatt taaaacggtc tctctcccac aaggggagag agtgagaaag gctattaacc
      961 cattcggtag ttcggtgctt ctttggtaat tgtcacatcg tggacgtggc tttctttaat
     1021 accagcacca ctaatgcgga caaattctgc tttggtgcgg agttcttcaa tagtggcaca
     1081 gccggttaat cccatacagg agcgtaagcc gcccatttgt tggtggataa tttctttcaa
     1141 gtagcctttg taagcgatac gcccttcaat cccttccggt acgagcttgt cggcggcatt
     1201 atcagattgg aaatagcgat ctgacgagcc tttactcatt gcacctaatg atcccattcc
     1261 acggtaggat ttgaatgctc tgccttgata aagctcaatt tcacccgggg cttcttctgt
     1321 gccggcaaac atcgaaccga ccattacgca acttgcaccg gcggcaatag cttttgaaat
     1381 atcgcctgaa taacgaattc caccatcagc aatcacagga atgcctcgtt ctttaagcgc
     1441 agctgccgct tctgcgattg ccgtgatttg tggcacgcca acgcctgtta caattctggt
     1501 ggtacaaatt gaacccgggc cgattcctac tttcacagca ctggctcctg catcagctaa
     1561 cgcaatcgct ccttctgcag tggcaatatt accggcaaca atcggtaaat cagggtattt
     1621 tgcacgggtt tcacgcacac gttgtaatac accttcagaa tgcccgtgcg aagagtcgat
     1681 taatagcaca tcgacacccg cttttactaa agcatcaatt cgttcttcat tgcccggacc
     1741 ggctcccact gccgccccca cacgcaaacg cccaaactca tctttacagg cattcggttt
     1801 gctttccgct ttttggtagt cttttagggt aatcattcct tttaactgaa attcattatt
     1861 cactaccagc actttctcca ctcggtgttc gtgcattaag tggaaaattt cttcacggct
     1921 tgcgttttct tttaccgtca ctaaacggtc ttttggtgtc ataaattcac gcactgtttt
     1981 gcttaaatcc gtgacaaatc gggtatcacg tccggtaata attcccacta aattttggtt
     2041 ttcatcaatc accggatagc ctgcaaaacc gttctttttc accaattcag ccaattccgc
     2101 taatgtcata tcaggagaaa tcgtcactgg ctcagaaaca ataccacttt caaatttttt
     2161 cactttacgc acacggtctg cctggcgttc aatcgacata tttttatgga taaaaccaat
     2221 gccgccttct tgagcaaggg agatcgcaag cttagtttct gtaacggtat ccattgcagc
     2281 agaaagcatc ggaatgttta aacgaatggt tttagttaat tgagtagaaa gatcagcagt
     2341 attaggaagc acagtagaat gtgccgggac gagaagaaca tcatcaaaag tgagggcttc
     2401 ttgtttaatt cgtagcattg caattattcc ttaaaaaatg attaaattga aaatctgtac
     2461 tggaaaattg cgagcggatt atacagagga actaggtttc tgtaaatagg gaaacgttta
     2521 cgctatctga aaatatactt tcaagcggtt aaattttgtg attttttagc aaacaataaa
     2581 taaaaaacga ccgcttgtaa gccaacaaaa aagagcgtat cgctacgctc ttttgctatt
     2641 taaaactatg cttcttttgt cgttgggaaa tatttttcct cgtcaaattc acgtaatggc
     2701 ttgtgttctt gccctaagaa agtgtagata accggcaaga taaacagagt aaacaatgtc
     2761 ccgattgcca agcctgctac gattaccata cccatactga agcgggcgat tgcaccggca
     2821 cccaccgcaa acagaagcgg aattaagcct gcaatcattg ctgccgttgt catcataatt
     2881 gggcgtaaac gaatcgtggc tgcgtggaaa atagcttcat agcgtgattt gccgtgcagt
     2941 aactgctctt ctttcgccac ttcacacatc aagataccgt gtttagtaat taagccgaca
     3001 agggtaatta gacctacttg tgaatagata tttaaggtat aacctgccgt ccaaataccg
     3061 ttggcgaatg ccatcatatc tttcgagcca gtgcctgctg caatccccat aaacaagcct
     3121 ttcattgcgg ttggaatgtt cattaccaac aatgcaccac tcacagctaa cggcacagaa
     3181 accaaaatta ctaatgggtc acgccaagat tcaaattgaa ttgcaagtac aagatagata
     3241 atgataactg ctagagcgaa agtcattgcc atcgcattac cttcttgaac gaactggcga
     3301 gattcaccac ggaagtcata ttgataacct gatggtaaag tgcgatctaa ttctgctttc
     3361 gcccaattta ccgcatcgcc gattgagcca gatactaccc caccaatggt ggccgagttt
     3421 aattggctca tacgaggtaa agaagatggt gatgttttta attccatcgt cacaaatgaa
     3481 cctaacggga tagattgccc tgttgcagtc gtgacatagt aattcattaa atcttcagga
     3541 tttaaacgat cattacgcac cgcttgcgac acaatcgggt aagcacgaga gtcaatatcg
     3601 acacgagtaa taatcgcacc ggataagaat gcccctaatg tgccactcac ctgctgcatt
     3661 gtcacgccat aagcacccat tttttcacgg tcgaatttca tattcatcgt gaccgtatca
     3721 aatttcaaat ctaaattcgc aaagaagaac tgaccggaag tttgggcttt tttcaagaat
     3781 tcagaggcaa cgattgccaa tttttcatag ctatcagcgg tagtaatcac taatgagaat
     3841 ggtagaccat tttcaccggt tgaaatttca gggaatgcaa ttgcattcac gtccataccc
     3901 accacttttt taccgattgc agccacatca ttagaaatcg cagcacgttc acggctacga
     3961 tcattccaat cttttaatgc aataatcgat aatgcactat ttgcaccatt aaagcctgaa
     4021 actgtcatta aggaagatac ttcaggtaat ttagttactt cctgattaaa ttgggctaac
     4081 gctgcttcgg tataatctaa attggtgttt gaaggtccat tagaaatacc aaccacaaag
     4141 ccacggtctt ctgtcggtgc aacttcactg gaaagtgagc caaataacat cggtaaactg
     4201 gcgaagatca gcaccgcaaa gaataagacg aaaccacgaa cagccataat accgcttagc
     4261 atattggtat agcagctggt cattttatct agtgatctat gcaccacgcg ggcaaatgct
     4321 gactcttccc cttctttatg ttcttttaat attcggctag acatcatcgg cgaaagggtt
     4381 aatgccgcaa tccccgaaat aaataccgca ccggcaagcg ttaaagcgaa ctctttaaat
     4441 agtgtccctg ttaccccggt cattaatgcc attggtgaat atactgcacc cagagtaata
     4501 gtcattgaaa taaccggtaa agcaatttca cgtgtaccga taatcgctgc atcaaatggc
     4561 gttttacctt ctttaacgtg acgttctacg ttttcaagta cgacaatcgc atcgtccact
     4621 accaagccga tcgctaatac caacgccagc aaagtaagca agttgatcga gaaaccaaac
     4681 atttgcagga agaataatac cccgattaag gaaatcggaa tggtaatcac cggtacaatc
     4741 attgctcgta atgaacctaa gaacaggata attactacca atacaatgac ggttgcctca
     4801 ccaatagttt taattacttc tttgatagaa ctatcaatcg caatggtttt atcgtaaaca
     4861 atatctcctt gaatggtgct tggtagattt tttaatacct gctcaaacat cggataaata
     4921 tctttcgcta cggttaaaga gtttgccgtt gcggctaccg aaacagcaag cacaactgca
     4981 tctttaccgc caaccgttgc tcttgctgca tcttggtatt tatccagctc aacagtcgca
     5041 atatctttta atttgatggt ttttccatct ttggtggttg aaaccgtaac ctcttctaac
     5101 tctgtcacag aaggcgtggt agaaagtact ttgtttctat aaaccgtata gtaaccgtta
     5161 gaattacccg cagcggtttg caagttattg gcacttaatg ccgataatac agccgcccct
     5221 gataggttat tgctcgccat tttatccgga tcaagccaga tgcgtaagcc aaaaacagag
     5281 ccatacacat caacgctaga aacaccattt accgtaaaga actgtggttt tactacacgg
     5341 ttaatataat cggtaacttg tgatgtatta agttcatcag agacaaatcg gatatacatt
     5401 aacgcatcat ttgaaccggt tgagactcta attgacggat catcaatacc gctcggtaaa
     5461 tttgagcgta ccgcattcac ttttgccgaa atatcggaaa gtgcggcatt cggatcggta
     5521 tttaacttca tttttgccgt taccgtagtg gtacttggag agcttgatga agtcatatag
     5581 tcaatattat ccgcttgagc aacagcctct tctaactgtg aggtaaccag tgtctgcatt
     5641 aaacgtgcat ctgcacctga atagttaaca ctcacggtta caatcgagac cgtcatctcc
     5701 ggatattcac gcacctgcaa tttttcgatt gcttgcaagc ctaggatcgt aatcaatagg
     5761 ctgatacaaa ctgccaaaac aggacgttta ataaagatgt cagtaaattt cacttaactc
     5821 actccactac agtttactgt ttttcgccgg tgtggtaatg cctacggctt ctgtatcaga
     5881 aactttaacc aacgcattat tacttaaacg ttgtaaaccg cctgttacaa tcagatcacc
     5941 tgctttcacg cctttggata attgtgaata gtttcctttg cggtcagccg ttttcacttc
     6001 catctgtttt gcacggtaca ttttgtttac atctaaactt gggttttgta ccgccatttt
     6061 gttcaccatt tctttatctt catcagataa tggttgcagc acatataccg tttcaccata
     6121 catagtgtaa gcgatagaaa tttgtggtac gacgatttgt ccggtttctg ttggtaaagc
     6181 aacatttaag cgggcaaaca tacctgaaag caatttttcc tgcccttctt caatcaccgc
     6241 ttccacatta attaagccgg ttaaacgatc cacagccgga tcaatagcca caattttagc
     6301 tgggaaggtt tgtgccggta acgcatcaat tacggctgtc actttttgcc caatcgagat
     6361 ttgctctaaa ttagtttgcg gcaaggtaaa acgtactttc attgaagatt gatcttccac
     6421 acgcacaatt tccgtaccca ttgtaatgta ttgcccaaca ttcacattca cgatacccgc
     6481 taaaccacta aacggagcat aaatttgacg gcgtttaatc gtagcacgca atgcctcgat
     6541 attggctaat aattggttgt aggtagattg agcattatca aactcggctt tagaagcact
     6601 gtttgaggca atcagattac ggtaacgctc taaatttgct ttggcattcg gtaattgcgc
     6661 ttcagaggct ctcaagttag caatttcaac actgctgtca aattctacta acagatcacc
     6721 ttttttcaca cgctgtcctg aagtgaccaa aacacggcta accacgcctg aagtttcagc
     6781 acttaacatt gccccttgat ttgggcgaat ataaccgacc gcagaaatgg ttggtgtcca
     6841 ttcttgggtc gtcacttgca tagcagtaac ttcgctcacc gcctccggca tatttgccgc
     6901 tgcttcggct tttttcattg ccccgatttt ttgtaaccct acgattgcag caaacacaat
     6961 caatacgatt aacaatgtga gtacaattaa aaactttctg cctttaccca gcttctgtgt
     7021 ttccgttgtc atacattctc cataaaacta ataaaaagaa acttaaaaag tgattgcttt
     7081 ccaagtgcgt aaaataatct cgtctaaata tccatcaaac tgattttctt gattcagatt
     7141 ttgcagatat tggatatcca ccaatgtgcc gatgcttaat ccataaagca actcattaga
     7201 tagatcagca ataatccttt gctttttccc ttctaaaatt aatttattcc aaaaggaagt
     7261 ttcatcagct atggtttccc gaatcaattc atcaatccct atcaccgctt gaaactgttt
     7321 taccaaatct aaacgctcga ttaaaaactg ccatttttta ttgaccaacg ctttatattg
     7381 ctcaaataac gccatttcag gcttaaactc aaaatgcata taaccgttat aacattcgag
     7441 taattgggca gccaatgagt gcaataaatc atctttggtt ttaaagtaaa gatataatgt
     7501 accggaagcg atccctgctt cttttgcaat actacgcatt gaaaggtttt gcaaaccttc
     7561 ttgcacaatc agcgactcgg ttgccgataa aatacggttt accatctctt cttttggctc
     7621 gcttcgccta gacattttat ctccttacct ataatgaaca gccgttcatt atagcttttt
     7681 ttatgaaaaa agaaagcaga aaacacctat caaattaaaa taaaatagtt gcaaaattcc
     7741 tcatttattg aacaagcggt catttttggc taaaactttg caaaaatcac tcaaacaata
     7801 acgcttaacg ctactttatt attatttttg tgctactatt tgtacctaat tataggatca
     7861 tctttatttc aatatggcaa cgaaatctaa ataccacacc aaacaatttg agcagctatt
     7921 ggctgacctc atcgccacca tagaaaagca taaagcaccg gtggatttat cgttaatggc
     7981 attaggcaat atgataacta acattttaat tgaaaatatt caaagcccgg cacaaagaga
     8041 agctctcgct gatgcctttg ccgatgcatt aaaacaatca ctaaaaacca aataagatga
     8101 tgtttgcacg cctacgcagt ttattgccga ccaattctcg ccaatatcga gaagaaacct
     8161 cacagaaaat cacgtggggg cattggtttg cactatttaa tattgtgttg gcactactca
     8221 tttcctctcg ttacgcattt aatgcagact ggccgaacac gcttgtaggc aaactttatt
     8281 tctttgtcag cctgttcggg catttcagct ttgtggtctt tgcaggattt ctattaattc
     8341 tgtttccgct cagttttatt gttaagaatc atcgcaccta tcgtgggctt tccgtgattt
     8401 tagccaccat cgggcaaacc gtgttattgg tggatactga agtcttcaag caattttatc
     8461 tgcatttatc accgcttgta tgggatctgt tagttaatcc ggaagaaggg gaactgaccc
     8521 gtaaatggca actgctgttt gtaccaatgc cactcctttt gctggcagaa atgctctact
     8581 ctcgctggtg ctggcagaaa ctgcgtagtt ttagccgcca aaaatggggc aaatatgtcg
     8641 ctctcttttt cgtgatcagc tttaccgcta ctcatttaat ctatgcgtgg gcagatatga
     8701 atgcctaccg cccgattacc gctcaacgag caaactaccc actttcttac ccgatgacgg
     8761 ctcgtaattt cttagaaaaa cacggtttta ttgaccgagt agaatttaat caagaaattg
     8821 aagaaagtgg cagactagat actttctatc tgaattatcc aaaatctccc ttgattgcga
     8881 ccaaaacgcc ctcaactaat attttactga ttaatttatc aggtttatct aaacagataa
     8941 taaatgccga aacaatgcct aagctgacag aaatcagcca acaaagccac cgctttatgc
     9001 agcattacag tagtggtgat tcagcctctg ccggtgcatt aggtctattt tacagtttaa
     9061 gcggtaaata tttggattcc gttttagccg ataaaaccgt gtcaccgctt atcgaaatcg
     9121 ctagaaaatc ggactatcaa ttagggctgt tttcacataa tggttttgcc gacccgattt
     9181 atcatcaggc gatcttctct ggtattttat tgcctacggc gcacagtaat gtaggggcga
     9241 ttgggcaatg gaaaaactgg atcagctctc gctcattgga aaatccgttc tttagctatt
     9301 tagacttaag aatgcccttc gcccacaccg ctcaagagca ggcaaaatta ttagattggc
     9361 aattcgctga aatctggcaa catttgaccc aaaatgcact attggcgaat acgctggtaa
     9421 tcattaccgc cgatattagt aatgaagttg gagcagaaaa tagcttcgat aaacaacaca
     9481 ttcaagtgcc gatgatgttc tactggcaag gcgaaagcaa agagtaccat ttcctttcaa
     9541 gccatttaga tattatgcca accttactga gccaattctt cggcgtgcaa aatccgctga
     9601 atgattatgc acaaggtatg gatttaagca cccagaacca acgtttatgg gtatccagtt
     9661 ctaatcacaa atggaatgtg gcgattatgc cgaatggcga tcaatatcaa attgatcgta
     9721 aaggcaactt taagcacttt aacagcaatg gcgaacacga gaaagatgct cgaccaccat
     9781 tagcgttgtt cttacaaatg attcaacaaa gcaatcaatt tattgaaaag taatgttcaa
     9841 caagcggtca tttttgcagg aaaatttgca aaatttcagc aaaatatgac cgcttgtcac
     9901 tatctgagct gtctatattt caagctaaca aatacaaacc aaaccattgc tacaaaagca
     9961 atactcccac cggcaaatcc gatattggct aatcccagtt gctgaatagc gatgctcccc
    10021 agtaatgctc caccgccaat gcctaaatta taagtgccgg aaaaaattgc agttgcgaca
    10081 tcagtcgcat caggggcaag ttcaagcacc ttcatttgca acgcaatgct cattccggta
    10141 atgccaattc cccagacaaa agcgaccata aacattgcca ctgttgagtc actcaaaaac
    10201 agtaaacaaa gctggctgca cataataatg gcgatcccgc ttaagataaa tttattcggg
    10261 gctttgccat ataaccgacc aaataaaaaa cttgccacca cacctgccaa gccaaaaacc
    10321 agcaaaataa aggtggtgtt ttccacactc accgaactga ttttaatcat aaacggctca
    10381 atatagctgt aagcggtaaa atgtcctgaa acgatcaatg ccaccagcaa ataaatgccg
    10441 attaacatcg ggcgtttaaa taacaaaggc aaacttttta tcgagcctgc atttttgctt
    10501 ggtaaataag gcagcaaccg ccaaatcatc attagcacaa tcaaagcgat aatcccaata
    10561 atgccaaagg ttgcccgcca gcctaaggct tgcccgatca ttcgcccata aataacatca
    10621 gcaacagccg ttttctttcc atattcgccg tgagtaacat caacggtaac gataataaaa
    10681 ataccaccca cgcataaacc gtcatcataa tgcctgccga tgaaggctcc atttggaaac
    10741 tgcttgcaat gtctgaaagc aatgcaatag gaataaattc ggtggtgttt actataaaag
    10801 ccgcaaaggc aagactaaat actctaagga acgataatct ccgttgagct tttcgagcaa
    10861 gtttcatatt aattaaatcc gagaaaaaca catttatttt caaaatttta aaaataaatg
    10921 taaaaacaaa atcaaatttc caaatttctg aaaataaaaa gattgccaat gtttccatca
    10981 acaatctttt tatacatatt tagattaaag tgctaagttt tatttagcaa agccttttaa
    11041 accaacaacg tgaacatact cttggttatt ggtgatttta cgcaccaatt tataagttgt
    11101 gcctcgttca gggctaatat tttcaggggc tgcaattaat aactgcatat ccaaacgttc
    11161 gcagagttca aatagcgtat taattgaggt agcatctaat cgagccgctt catctaagaa
    11221 caataagcga gccggtagaa tatctttggc acgcatacgg cgagcttctt cttcccagct
    11281 ttgaactacc attaagagaa tcgacatacc tgtaccgatc gcctcaccgg tcgataatgc
    11341 actactttct gcacgcatcc agccgtctgc accacggaag gtttccactt ctaaatctaa
    11401 gtagttacgg taatccaata actcttcacc aatggtctgt ggtgtacgtt gccccatctc
    11461 aatatgaggg ttcacccgtt tatacaacat cgctaaggct tcggagaagc tcagtttttg
    11521 gctgtcgaat aaatctttgt gttcctcacg attattggat aacgcattga gtaaaatagc
    11581 gtgcgtatct cggatattca ccaccaaacg cacccctttt acctgaccga atgcaatatt
    11641 ttgtaaacct tggttcagtt gcaaaatgcg ttgttgttca cgctgaatgg ttttacgtaa
    11701 aatatttgcc acactttccg cactgatcgc cagttttttc tcacgaccgg ttaattcatt
    11761 ggttaagcgt gaaagctcga tttccatctg ctcaatcgca tcaatcggat catcggtttt
    11821 gataatgtct tggcgaatcc gctcacgcaa atgctgataa accgcaataa agaacgccac
    11881 tttgttttcc ggcttgcgac tatcttcaga agcccgcaag ctatcacgca ggtattcatt
    11941 atccgccacg gcggtgcgta atgccccgag agctttatcc gaaatcgaac gtaattcttc
    12001 agccgattga taagccaatt cacggcgatt taaacgtttt tccacatcgc tgttacgaga
    12061 taaacgttgc acaatacacc agctggcttt tgcctgcacc accaattcac gttgtgtatg
    12121 ataatcacgt tcggctttac gtaaggtgcg gttaaggtta tccatttccg cctcgatcac
    12181 cgcaatttgt ttatctaaat aacctttgcg ggaacgttgc tggcttaaac gttgttgcaa
    12241 ttcatcacgg cggaatctgg ctcgctcttc cgctccgcta tcaccacgca cgcccaaatc
    12301 gtcaatttca cgaattaact cttgtagcat ttggtttttc gcctcataag aactgcgtaa
    12361 gccggtcaat acttggttat attgtgaaag ttgagcttga gcttgacgca gctgatcacg
    12421 agcctgttca cgctcacgtt gtgcattttc caaacgttgg cgtagctgtt cggttaatgc
    12481 agagccttct gtacccaccg tttcttgata gctaaaatgg aggcggcgat tcattacatc
    12541 agccaagctg aacacttttt gctgtaacac tttttgctcg gcaactgaac ggcggtaatc
    12601 ggcttccaac tgttcaaata aagccggatc actttttaat gcggctgcaa tcggctcaag
    12661 ttggcttaat gttgctccaa attggcggat aaacatttca tcttcttctg ccaattctaa
    12721 ttgctcacga cattcctccg ctcgtgcttc cagcgtttca tcggctaata aattcgcaag
    12781 cggtagaatt ttattcaaca tttgcaactg ggcttttacg ctttctaatt ggtgacgtaa
    12841 ttgctgttcg ttaccggctg attgtgccaa ttcacgttca atttctgccc gttctgccgc
    12901 aatctcttgc attaacattt cagggttttc ttggaacgct aaatttaagt gcgtgccgat
    12961 aaattggctt aagtgttgat gtaaacgctg gcatttctgc acatcaaagg cacgttcagc
    13021 gtgtttttct gcggtttcat cacgctctgc ttttaaagtc gctaaatgtt tttcacgagc
    13081 agcacgtccg aataacggca cttcagggaa tttagaataa cgccattggc gatcggagac
    13141 tttcaccacc acgccttcgc ctaattcctc ggcactaaat accgcatcgt caaaggcgga
    13201 cggatcacct tcaattaaat aaagatcact tgggcaatcg tctaatttct ctagctgtgt
    13261 tttaaccgcc tctaaatcac gcactacaat agcgtggcga gcctcgccgt ataaggcgga
    13321 gaaataaggc gcatcttcaa ttgatacatc atcatataac tcagagagta acactccacc
    13381 aaaacgttct gccaactggt ttaagcgggc gtcttccgag ccgtccggct ggcttaagcg
    13441 attaatttgc tcatcaagca tttgttcttt acgagccaat tcatcacgag caagggtggc
    13501 ttcacgctct ttgctcagca tattttgcat aaactgcatc actgattggc tggcttcaaa
    13561 cttctcgcca cattgctctt ctaaacgagt cagagccgat tgtgccgtat gccaagccgg
    13621 tgcattcttc gctaattgct gatattgttg attaagctgt tcacgttgtt ggcgttgggt
    13681 tgaacgttgt tctacaaagt ccgaaagctc tgcctctaaa tcttctaggc gagcttgctg
    13741 ctcttcaaaa taggcgtcta attcttccgc tgaattgagt tgttgttgcg atttttggtt
    13801 aaattccgcc actaaacgct gggcattttg ctgttgttgc aaacgctgtt ctaaatcgtt
    13861 gagtttttga cgtaaactca ccgcttgctg agcttgcatt ttttgctcag ggaaggcaga
    13921 aagtaacgca cgagcctctt cccacgcttg caagcggtca atttcaccgg aaattttgca
    13981 aaccaattca aacgcttttt caaattgggt tttcgccata tccgacacgc ttaaacgttg
    14041 ttccagctca aatacttgat cggtaagatc ttcggcttga gccacaaatt ctgcgtggta
    14101 atcttcaata ttatttaaat ctaaattcac taagccggtt agctgtttgg ctttttctaa
    14161 cgcattcacc gcttgttggt attgcaatgc acgagtttgc tgtgcatcta aggcttgttg
    14221 gtaatccgcc atttgagaac gcaattcttc aacgtgatca tctgcctcat ccgcacgagc
    14281 ctgagcattt tcggcaattt ccgcaatttc ttccaatgcc tcttgctgtt cttccagctt
    14341 aatattcagc tcttcaactt cgtcttggta gcgttcgatt ttctcttggt ggcgtaacgc
    14401 attcatcact aaatttagat gatcgttcgc actattgtaa tccgcctcta acgccagctc
    14461 tgcttcggca atatccgcac tttcacggct aaattccaca aagcgttgct gttcgagcaa
    14521 aattttggat tttgccgcat accactcttt gcgttgctct aaggcttgtt gtacattgcc
    14581 acggcgttca ttcgcattac gcatataatc cgccgacaca taattggtcg attcggtaat
    14641 taagcgtttg aacatatccc gatccgattg cgtgacctta atcgcctcta aggtcatacg
    14701 gttttcacgc agagcggatt ccatatcttg gaacgcttgg cgaacgcccg tattttccgg
    14761 caacaagtaa tcacgcaagg atttggtaat cacacttgaa ataccaccat aaagcgaggc
    14821 ttcgattaat ttgtagaatt tgctacggtc ggctgccgaa cgaaggcgtt ttgggattac
    14881 gcccaaatcg aacataaaac tgtggtaatc agtaatcgaa tggtactgtt tgaattggac
    14941 ttcgctgttc tcaaattgat ctttgagttc atttaacgcc agcactcgag ccttattccc
    15001 cacttgttcg gtcagtaggc tgataatgct ttgctcttga ggaatattct ggagcgagaa
    15061 cgaacgaata tcgacttttt tatcccgtcc gacaatttgt tgcaaacgca cgccggtaat
    15121 aatccgttgc ccacgggaat tgaatgactc taacaccgca tagcaaacac ccgcttttaa
    15181 cttaccgtat aagcctttat cacgagaacc ggcggttgag cctgcttcag tcgtattacg
    15241 gaaattaagc aaggttaaat ctgggatcaa ggcggtcaca aaccctgcca ttgtggtgga
    15301 cttacctgcc ccgttaccgc ctgaaagcgt ggtcactaag tcatctaaat caaaggttcg
    15361 agcaaaaaaa ccgttccagt taatcagcgt taaagagaga aatttaccgc gttgtacatc
    15421 attcgggcgt gcaagcggtg caatttgagg attattttgc aattctgtgg tatcaatcat
    15481 tatgttttct cactaattgt cctagcacgc taaagcgtac taggttaggt ataggtgagt
    15541 agctccgcta ctctaatcgc aacctcagcc ttggagggct gctttatgct taacctagtt
    15601 cggctttacc gtgtctaggg cagactcatt aaatgctgaa tctattcgaa tgaaatcact
    15661 cattttctcc gtcaaagggg gcttcatctg caatattttc atctatttca accgcttgtt
    15721 cgtttaacaa cgcaggggtt gtcgcttcac catcacgaat taagcgaagc tgtgcctctc
    15781 ttgggtcatc accggtacgc acatcagccc caaaacggaa gaccgattct gaaatcacaa
    15841 attttttgct gttttgctcg cctactcggg taataatgcc gatacgggct aatctgcgta
    15901 acgctccgcc ggctttttct gccagcttgg cacggtctaa atcggaaccg gtcgaacgtg
    15961 ggtttaccgc ttttaataat ttgctttcat cggcaagact gagtaattct tcatacacat
    16021 catcttggct gaaaatcccc tgctgagcca aacgttccgg acttaaatag aggtagcaca
    16081 acaccttacc cactaacatt tccatttctg acattgccga acgggcaatt agtgtcgagg
    16141 ctttcgggcg taggtagaaa aagccttccg gtgctcgaat caactcaacg tgataacggc
    16201 ggtaaaaact ctctagttcc gcttgaaaat ccatcaaaaa gacgtgttgg tcaagctgct
    16261 cggtattgat atggcgaccg gctcgtaatt ggctgtctag ctccggaaaa atcgggttgg
    16321 caatcgcaag tgccagtttc ggggaaatga aatcttggat attctctgtc attgtcattc
    16381 tcttcaattt tgcaaaattc tgggtaaaaa cgaccgcttg ttatttattg tattggtcga
    16441 taacattcgc ctgcacttcc gccccttgct cgttaatcgg ctgccattgt gggtaaacgg
    16501 cttggctatc ttggcttgcc atacctaact taacagcttg atcgacaata atacgagcca
    16561 cgtcaaaatg gcgggattcc gggaatcggg caagctgttc acgcaagata acgcctaaat
    16621 ctatcggttt accttcagca cggaacggcg ctaaatgagc ttgcattgcc gaaacaattt
    16681 gctcttgcac atctgaaagc gactcatact ctaactcact tggcaactcg cccaccgatt
    16741 ctgcctcatt taacattgct tcatcatcac gcaagtccag taacgaatcg gcttttgcag
    16801 tataaagcaa ccaagggctg ttgtaataat cttgaatcga ttggcgtaac cgttgcccga
    16861 atacacggtt tttgtccata tcaatcgctg tacgaataaa tttatgcaca tggcggtcat
    16921 agccgatcca aagatcgata gcttgttgtc cccagctgat aatacggtct aacttatttt
    16981 gtagattcac aatcagctga tcgataaaat ccaaatcatt acgagccatc aggcaacttt
    17041 gaatccgcaa taattgagct tgcagtttat caccagcggc atttaaggta tcttgcaact
    17101 cacgcaaatt ccccgaggtt tcgtctaaca attgctcaca actcataatt gcttcgtgcc
    17161 agttttggct aagcagttcg gctattcgtt cacggatttg gtgctgattt tcgtccataa
    17221 tccgttgtga aagatcgatg ctgtcaaaga tttccgccac cgaatatttc aatggggcaa
    17281 acacattatt tcgccaaaaa cgttcatctt gtgcctgctc tattccctct tccgctgcta
    17341 ctgaagctcg ctgaatttca tctgccacaa tcgaaagttg aatcgataaa cgcagggtag
    17401 aaaattcccg ctggcgaacg taataatttg aaattcccac ccctaacggc gtaacacgat
    17461 aaatcgccaa accttccgta aattcgctac taaaacggtt taacaaccgt tgtctgacta
    17521 aatcattaat cgcattattg gcacgctggg taaaagtggc atcagattgc tcaaacgaat
    17581 ttgaaacata acggaaaaga tcaataagat cactttctaa caattcacca tctgtctgtt
    17641 cttggttata aatagagata gcaagtagaa acgctaagcg gtcggaagaa agcgaaagtg
    17701 aaaattcacg atctttcgtc caagagatga gttctggaat agtctgtgcc aattcgttct
    17761 gcatacgggc ttaatcttta atttctatac aaaaatggta tttattgtaa ctgaatgtaa
    17821 tcaaaatggg aatggataaa acgcagacaa gagaaatgaa caatataagc ggtcaaatat
    17881 gggtgatttt ttgcaaaaag tattttaaag gtaaatgaat ccgaaaattt attatcacta
    17941 cgctaattta tgataccata aatagaaaag actggatcca atagaatatc agacacagcc
    18001 ccttagatca tagtctaaac tctaaggctt agagtgattt agctaactct ttaataaatg
    18061 ctttaaattc ttttccgcat ttgtcatgat ttaaactata ttctacaaat gctttcatat
    18121 agccgacttt ataaccacaa tcaaatgagc gccctgtcat atgaaaagct tcaaccgttt
    18181 cttggtgaat caacatatca attgcatccg tcagctggat ttcatcacct acgcctactg
    18241 gcgttttttc taataaattc caaatatttg aggaaaatac ataacgtcct actaccgcta
    18301 aattagaagg cgcctcttca atacttggtt tttcaaccat tttcgcaata ggcgctgccc
    18361 ccccgagagg gatatctaca ccatggcagt cagcaacccc atagctactt acattttcca
    18421 ttggaaccgg cgcaaccata atttggctat atccggtttc ttggaaacgc ttcaccatcg
    18481 cagctaaatt ttccgttttt tggtttgctg taaattcacc aagtaataca tctggtaata
    18541 caaccgcaaa cggttcatcg ccaaccactg ttcgtccaca tagaaccgca tgacctaaac
    18601 ctttggcttg cccttggcga acgtgaatta aggtaacatc ttttggtaca atagaacgta
    18661 catcatctaa taattgacgt tttactcgtt tctccagcat cgtttccaat tcaaaagagg
    18721 tatcaaaatg gttttcgata gcattctttg aagagtgagt aaccaataca atttctttaa
    18781 aacctgcagc cacacattca tttacaatgt attgaataag aggtttatct gcaaggataa
    18841 gcatttcttt tggaatagct ttggttgcgg gtaacatgcg cgttcccaat ccagcaacag
    18901 gaataatgac tttcatttgg aatcctttga tgacttaaca tattagatat aactgaaata
    18961 aaccgcttag acataacagg cggtcaattt tcagaaaatt ttgcattgcc tgcttcgctg
    19021 ttatcatcta gcagctttac agttaaaatg cttattccgc attttcctct tctactgagg
    19081 cttttattct ttcataaatc tctcggcggt gtacagagat ttcttttggt gcattcacac
    19141 ctaatttaac ttgatttcct cggatgctga gtaccgtaat ctcaacatca tctcctacga
    19201 gtaaaacttc cccaatctta cgagttagaa taagcataat tgtctcctaa aaagtgaaaa
    19261 actctataaa tacttaaata tagagtaaag ttttaaaggc gagttcagct cgccttgtta
    19321 ttatttttaa agttttgctg taatccattc ttgagcaagt gacaatgctt gcaataaatg
    19381 ttgtggttct gagcctccgg ccattgccat atcaggacgt ccgccccctt tacctcccac
    19441 tttttcagcc attgcaccaa ctaattgacc agcattgact ttatcggtta aatctttggt
    19501 cacacctaca atcaaattga ctttatcttc cgccgtagtc gcaaatacaa caactgcact
    19561 gcctaattga ttttttaggt catcaaccat cgttctcaat gcttttggtt caacattctc
    19621 taattgttga atcactacat tcacgccatt gatttgggta gcttgtttgg ctaaatctga
    19681 acctgcttgt gctgcaagtt tatcttttag ctgttgaagc tctttttctg tacgtttagc
    19741 cttctcttgt aattgaacaa ttttctcaac gaatgaatga ctgtctgctt ttaacaattc
    19801 agcactttgt tgaacggctt gttgtaaggt atgcaaccaa gcaatcgcat tttcaccagt
    19861 gacagcctct atacggcgta cacctgctgc taccgcacct tcagaggtaa ttttgaataa
    19921 gccaatatca ccggtttgtt taacgtgtgt gccgccacaa agttcaatcg agaaatctga
    19981 catttccact acacgcacta cttcgccata tttttcacca aataacgcca ttgcaccttt
    20041 cgcttttgca gattcaatat ccatttcttc aatgattacc tgaatatttt cacgcacttt
    20101 agcattcacg atacgttcaa cttcttcaag ttgtgattta gtaattgctt ccggctgaga
    20161 aatatcaaaa cgtaaaatat tttctgacac taatgagcct ttttgagcaa cgtggtcgcc
    20221 tagcacttgg cgtaacgcag aatgcagtaa gtgggtagca ctgtggttta atgtaatagc
    20281 atgacgacgc tctctatcta cgatcgtatt aactttgtcg ccaacagaaa gtgagccgga
    20341 agttaattgc ccaatatgcc cgaatacttg accatatttt tgcgtatcta ctacctcaaa
    20401 attgcaaatt tctgcggaaa tttgaccgct atctcccact tgtccgccca tttctgcata
    20461 gaatggggtt ttatctaaaa tcactaccgc attttcaccc gattgaatag actcaaccga
    20521 ttttccatta ctaaataacc caattacagt agcatcattt aagctggttt cagtatatcc
    20581 actaaagcat gttttactgt ccactttaat cacattgtta taatctgtgc caaagctact
    20641 gctggctttc gcacgctcac gttgtgcggt catttctgca ttgaagccgt cttcgtcaat
    20701 tttaatatca cgttcacggc aaacatctgc ggttaaatct aacgggaagc cataagtatc
    20761 ataaagtttg aacgcaactt cgccagataa ggtgttattt tcaaccttcg ctaatgcttc
    20821 ttctaataaa ttcaatccac gctcaagagt acgggcaaat tgctcttctt ctgctttgag
    20881 tgtcttttga atatgcgctt gtttttgggt cagcacctca ccagcttgcc ccattaccgt
    20941 tgcaagtgtt ggcaccaatt tatagaaaaa ggcttctttt gcacccaaaa tattaccgtg
    21001 acgaaccgcc cggcggataa tacggcgtaa tacatagcct cttccttcat ttgaaggtaa
    21061 aacaccatcg gcaatcagat aggaacaagc acgaatatgg tctgccacta cacgtaaaga
    21121 tttattatct aaatctttca cattaagcaa agtagcgact tctttaatta aagtttggaa
    21181 aatatccgtt tcgtagttgg agtttacgtg ttgcattacc gcagtcatac gttctaaccc
    21241 catccctgta tctacagaag gcttaggcag tttttccatc gtaccgtctg ctaaacgatt
    21301 gaactgcata aatacaatat tccatacctc aatatagcgg tcgccatctt cttctgggct
    21361 acccggtaag ccaccccaat gttcaggccc gtgatcatag aaaatctcgg tacaagggcc
    21421 acaagggccg gtatcgccca tcgcccagaa gttatctgaa gcataaggtg cgcctttatt
    21481 atcgccaatg cgaataatat gttccgatgg tacacctact tctttatgcc aaatatcgta
    21541 ggcttcatca tcagtttcat acacagttac atataatttt tcttttggta agccaagcca
    21601 ttgtggagaa gttaaaaact cccaaccgaa tttgattgca tcttgcttga agtaatcacc
    21661 aaagctgaaa ttccccatca tttcaaaaaa agtatgatgg cgagcggtat aacctacgtt
    21721 ttctaaatca ttgtgtttac cacctgcacg tacacaacgt tgtgccgtag tcgctctgct
    21781 ataagggcgt ttttctaacc caagaaaaac atctttgaat tggttcatgc ccgcattggt
    21841 aaataataat gtcggatcat tctcgggaac aagagagctg cttggaacaa tcgtatgtcc
    21901 tttagtttgg aaaaactcta gaaaagattg tctgatatct gaagttgttt tcattaaaaa
    21961 tcactctttt tgtaaataga agttaaacat ttagttatct tgctatttta cacat
//
LOCUS       DANLZQ010000029        21181 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.029, whole genome shotgun sequence.
ACCESSION   DANLZQ010000029 DANLZQ010000000
VERSION     DANLZQ010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 21181)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21181)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21181
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.029"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..370
                     /locus_tag="PXE50_001024"
     CDS             <1..370
                     /locus_tag="PXE50_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5621950.1"
                     /translation="LDKPELVSVSFFVNNLIAVLLQSDFSRKLNLTVHKLIYIAPILI
                     ILQIMPWFYALQWLSTITAFLYLVIFATITVYANTALSNMLVKLDNGKNQGLMFGSSK
                     LILAITTLGVMNVLPYIFLI"
     gene            complement(367..1500)
                     /locus_tag="PXE50_001025"
     CDS             complement(367..1500)
                     /locus_tag="PXE50_001025"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HDL5621951.1"
                     /translation="MLIFMMNEYSPNYYIGVMSGTSLDGVDIALLDFAKNPPKMTACD
                     FFPMPEELRADISALLKTGETNLQKLGEIDHRLGLLYAETINAFLAKNQLKAEDIQAI
                     GCHGQTVWHSPDSEYPFTTQIGDMNLVAEQTGITTIADFRRKDMAVGGQGAPLVPAFH
                     QAIFSDPNRLTVVLNIGGISNISVLNPNSPTVGYDVGAGNTLMDSWIEQHQGKRYDKN
                     GEWARTGKLNTELLATLLDESFFAKAPPKSTGRELFNLTWLAKKLENLTACQPQDVQR
                     TLAEFTAQSIANELLRFESSLPRLLLVCGGGSRNPLLMERISALLPEWEVTTTTEFGL
                     DIDYVEAAAFAWLAYQRIHNLPSNMPSVTGAKKAVSLGVIYPA"
     gene            complement(1692..2531)
                     /gene="queF"
                     /locus_tag="PXE50_001026"
     CDS             complement(1692..2531)
                     /gene="queF"
                     /locus_tag="PXE50_001026"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HDL5621952.1"
                     /translation="MNYNDKSLSALKLGQKTEYKSEYDASLLQPVPRKLNRDSLGITQ
                     EQPFNRGADVWTCYELSWLNQNGLPQVAIADVAIDFKSENLIESKSFKLYLNSFNQTK
                     FSSIEEVGKTIQADLARCASGQVSVKIYQLSHYTQQPIVDFAGDCIDEQDIQIDSYAF
                     STHYLENIAEDELVEETLVSHLLKSNCLITSQPDWGSVQIRYKGKKLNREKLLRYLVS
                     FREHNEFHEQCVERIFCDLMQFAEPEKLTVYARYTRRGGLDINPFRSNFEEVPENLRM
                     ARQ"
     gene            complement(2536..3084)
                     /gene="gmhB"
                     /locus_tag="PXE50_001027"
     CDS             complement(2536..3084)
                     /gene="gmhB"
                     /locus_tag="PXE50_001027"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HDL5621953.1"
                     /translation="MGKKAIFLDRDGTINIDHGYVHQIDDFQFIDGVGKALKQLQDKG
                     YLLVLVTNQSGIARGYFSEAQFMQLTEWMDWSLDEDYGVVLDGIYYCPHHPEGKGEYR
                     KDCDCRKPKAGMFTQAIQDLNIDPSQSYMVGDKLEDILAAEAAGVKTKVLVRTDKAVT
                     EEGQAKADLVLDSLVDLVKYIK"
     gene            complement(3084..3551)
                     /gene="bcp"
                     /locus_tag="PXE50_001028"
     CDS             complement(3084..3551)
                     /gene="bcp"
                     /locus_tag="PXE50_001028"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HDL5621954.1"
                     /translation="MNILQAGDKAPKFTLQNQADEPVSLSQFAGKKVLVYFYPKALTP
                     GCTTQACGLRDSKSELDELNVVVLGISTDLPKKLAQFVEKKALNFTLLSDPDHQVAEA
                     FGVWGEKKFMGKTYDGIHRISFLIDEQGGVEQVFDKFKTGEHHQMIVDYLRGR"
     gene            complement(3638..3835)
                     /locus_tag="PXE50_001029"
     CDS             complement(3638..3835)
                     /locus_tag="PXE50_001029"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5621955.1"
                     /translation="MKFGYLNGVLEGKGKMRFDEAKLHAESEFEKYRIVQDRLFESDF
                     DKVLKEMLRSENQYRPSFSTT"
     gene            complement(3804..4286)
                     /locus_tag="PXE50_001030"
     CDS             complement(3804..4286)
                     /locus_tag="PXE50_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence RhuM family protein"
                     /protein_id="HDL5621956.1"
                     /translation="MIDKQIRNSTAEFLIFTQQNGAENITVRYEDNEIWLTQKLIAQL
                     FDCSTDNVSLHLKNIFNSRELDPNSVTEDFSVTAADVKNYRTKHYNFDAVISIGYRVN
                     SVRATQFRQWATKVLRNFAQKGYVIDRQRMENGTFLNEDYFEQLLAEIREIWLSERRS
                     "
     gene            complement(4429..5586)
                     /gene="hemW"
                     /locus_tag="PXE50_001031"
     CDS             complement(4429..5586)
                     /gene="hemW"
                     /locus_tag="PXE50_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HDL5621957.1"
                     /translation="MNLILPPLSLYIHIPWCVQKCPYCDFNSHAQKGLIPEQEYIEHL
                     LADLSQDLTAYRVAIGDRKLYSIFIGGGTPSLFSAEGIAYLLIEVEKRIAFEPNIEIT
                     LEANPGTAEAERFLGYAQGGVTRISMGIQSFEPEKLLKLGRIHDANEAKQAIKFAQNS
                     AKSGLQSFNIDLMHGLPNQSVKQALADLETGISLNPPHLSWYQLTIEPNTMFYYRKPT
                     LPDDDELWDIFEQGHQLLTNAGYEQYETSAYAKKGYQCRHNLNYWRFGDYLAIGCGAH
                     GKISYPTGEIYRFSKIKHPKGYMRGEYRYSQDLIELDDRPFEFFMNRFRLLEATPKQE
                     FEWFTGLDREVVRPTIDWALNQNYISETATHWQITQHGKLFLNELLEGFLE"
     gene            5808..7391
                     /locus_tag="PXE50_001032"
     CDS             5808..7391
                     /locus_tag="PXE50_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5621958.1"
                     /translation="MKKQFEHNESRRGFMKLIAGVGAGMAFSGTLGTFTPKAFAAPAA
                     GSTIEAGIAYPISTGFDPLTSSGASSMAANLHIFEGLVDLHPATRKPYLALAAAEPEK
                     IDDVTYRITLRDGAKFHNGNPVTTEDVVYSFERVLDPAKASLFAQFIPFIDTVKKVDD
                     KVVEFKLKYPFALFKERLTIVKIVPKAVVEAGQAAFDANPVGTGPYKFVSATKDDRIV
                     FEAFADYNGGYPAQVEKMTWFLLSDDAARVTAQESGRVQAIESVPYLDAERLKRKGTV
                     ESVQSFGLLFLMFNCEKAPFNNPKVRQALHYGLDTQKLIDVVFLGNAKAATSYVQDTH
                     PDYVKANSQYDFDKAKAEALLAEAGVTELKFELLATDHSWVKECAPLILESWNSLKGV
                     KVSLKHLQSGALYGTHVDKGAYEVVIAPGDPSVFGNDLDLLLSWWYRGDVWPKRRFRW
                     SETAEYAEVQKLLDEAAKNPAASKEAWAKAINIIAEQVPLYPIIHRKLPTAWNDKALT
                     GFQPLPTTGMSFIGVGRAK"
     gene            7603..8556
                     /locus_tag="PXE50_001033"
     CDS             7603..8556
                     /locus_tag="PXE50_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5621959.1"
                     /translation="MEIILRLLWRRLMALPVMILGVTALVFIVLQFTPGDPATVALGE
                     SASEAAKEIYREQHGLNDPLLVQYFRFLGNLFVLDFGMTTPPEQPIVDMIAKAFPLTL
                     QLTFIGVFLAAIVSFTLGVTAALYRDTWIDQLIRLISVAAVATPSFWLGILLIQYFSL
                     KLDWLPSGGFIPFSEDPKGYVNSMVLPSLALAVPVCASLIRVVRTTMVEEMDKDYVRT
                     AIGNGVPYSTVIRHNVLRNALITPVTVLGLRVGYLLGGAVVIEQIFDLPGMGKLIFNG
                     IVNHDLNLVQGVVLTIAFTFVLVNIIVDILYLLINPKIRSL"
     gene            8558..10528
                     /locus_tag="PXE50_001034"
     CDS             8558..10528
                     /locus_tag="PXE50_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/oligopeptide/nickel ABC transporter
                     permease/ATP-binding protein"
                     /protein_id="HDL5621960.1"
                     /translation="MFRQGLAARLASGGARFRALSTSSKIALLFIVFIALVAIFAPLV
                     APYDPLQTLRPVQAPSGDYLFGTDRLGRDIFSRMVWGARTSLFIGLGAVGVAILFGSI
                     LGATAATADKFGNEVIMRFMDILMAFPGIALAAVLLATFGNSVPVIIVTIAVVYTPQL
                     ARVVRANVVSQWEEDYVRAERVIGGSRTYILLKHVVRNTAAPVLVFATVMVADAIVFE
                     ASLSFLGAGVQPPFPSWGNILSEGRNLVLSGFWWATTFAGIMILLTVLALNILAEGLT
                     DALVNPKLKRSTQSKEDVAKPLATDVQEAMSETLALKRYLLKLHEKETTRTDRMQLNS
                     TAKPILQVKNLSIRFPNRYGETPLVDNISFTVHEGETMGLVGESGCGKSITAFSIMGL
                     LPKTAKITGEILFTDRSGKQHNLLESADLNALRGHEISMIYQDALSALNPSMRIKDQM
                     AQLISRGGKQSAETLLQWVKLDPEKTLNRYPHELSGGQRQRVLIAMALAREPKLLIAD
                     EPTTALDVTVQAEVIKLLNELREKLGFAMVFVSHDLALVAQIAHHITVMYAGQVVETA
                     PTTPLLANPTHEYTRGLLGSVLSTELRAERLYQIPGSVPSPFDFAKGDRFASRSLRPD
                     ANPEQHLKLVPTGDHPQHFWASHLEDPQSKEA"
     gene            10543..11349
                     /locus_tag="PXE50_001035"
     CDS             10543..11349
                     /locus_tag="PXE50_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5621961.1"
                     /translation="MSMKFIKEQPIIELSNIVVQFASRDGTLFNPKKFTAVNDVSLAI
                     HAGETVGLVGQSGCGKSTLASVMIGLQKPTSGTVKFNGLEMKYGSAEARKYFGSQVSV
                     IFQDPATALNPRMRVLDILKDPMDIHNILQPQEREKRVYDLLSRVGLPRSAALVEPTR
                     LSGGQKQRVAIARALALNPKLIVADEPTSALDVSVRAQVLNLLADLKKELNLAMVFIS
                     HDLQTVHQVSDRIVVMNGGKIVEMGDASDVFERPTQEYTRTLIEAAPSLL"
     gene            11412..12998
                     /locus_tag="PXE50_001036"
     CDS             11412..12998
                     /locus_tag="PXE50_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HDL5621962.1"
                     /translation="MIQITQTINIDLLIVGSGIAGLSAAVEAKEKGINTLLISKSTIG
                     SGASYFPLKATLGIQVTGDEADKIHFKEDIENIGKGKINPNVVQAYIEDSPQAIELLH
                     RIGFQPWKRNDNRPACFAKYPRPIYLIKDWRESALRAKQILQEQHIAFYENATLLHIV
                     TDNNQVQGAVFSLTTSGQISYIFCKTKHLILAAGGIAGLYKDNLYPADVIGSLHYVAQ
                     QAGATLVNLAFIQFIPAFVEPKYKVLFGEHTLKYVTQITDSKGNNLFPHLNAEQFAKM
                     VLERSHYAPFSLDFAGVEFDLVMMKHLLENPHEKGIYLKYSPKLYEDTEEFYTVYLNW
                     LKNEVGIDLVQDKIAIKPFAHSCNGGIQINQWGESAVKGLFAIGEISHCIEGANRMGG
                     NSVGGGLVFAKRAVSEIVRSLEQNDLQKNSEISPLAMAEKALNQLANSTANLELTASE
                     VLSTIREKMALYANVYRTRSNLKLLLEELNRLEQEFDPIYHAQYQGIEIYNALKTAQL
                     VVNQMLNEQSLGAHYLDEQN"
     gene            13044..14426
                     /gene="nhaC"
                     /locus_tag="PXE50_001037"
     CDS             13044..14426
                     /gene="nhaC"
                     /locus_tag="PXE50_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HDL5621963.1"
                     /translation="MNNYLLKLKPMTAVILSLLTVFILGFTMIGLGWVPQISILAVIV
                     MLLLFGLINKIPFKNMQEGMASGLMSSIGAVYLFFFIGLLVSALMMSGAIPTLMYYGL
                     SVISPELFYISAFALSSVVGIALGSSLTTTATIGVAFIGMASAFGANPAIVAGAVVSG
                     AFFGDKTSPLSDTTTIAASVVGIDMFAHIRNMLYTTIPAWILTALFLWFLTEPTDAQN
                     LANIENLKTNLQETGLIHGYSLLPFVTLILMAIKRVNSIYIIVTTVTLSLIITYIHSS
                     PTLEQLGNYFFTSYKPVEGVDLGEVASLVSRGGINSMFFTITIVLLALSLGGLLQILG
                     ILPALLNGISGFLTSTGRVTLVVASTAVGINVLIGEQYLSLLLSGNTFRSTYERLGLE
                     VKNLSRTIEDAGTVINPLVPWGVCGVFISSVLNVPVLDYLPYAFFCYICLILTLIFGF
                     TGVTISKKAN"
     gene            complement(14469..15665)
                     /gene="ispC"
                     /locus_tag="PXE50_001038"
     CDS             complement(14469..15665)
                     /gene="ispC"
                     /locus_tag="PXE50_001038"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HDL5621964.1"
                     /translation="MKKLVILGSTGSIGKSTLSVVEHNPNPNQYEVFALVGGKNVELM
                     LEQCRQYQPTFAAMDDEKSAQALKTALATLGSKTEVLAGQAAICELAAHSEVDMVMAA
                     IVGAAGLLPTLSAVKAGKTVLLANKESLVTCGQIFIDEARKSGAKLLPVDSEHNAIFQ
                     SLPPEAQQKVGFCPLAELGVSKIILTGSGGPFRTKPLNEFDAITPAQAVAHPNWSMGK
                     KISVDSATMMNKGLEYIEARWLFNATAEEMDIIIHPQSIIHSMVRYIDGSVIAQMGNP
                     DMCTPIAHTMAYPNRINAGVPPLDFFKLKELTFIEPDFARYPNLKLAIEAFAEGQYAT
                     TAMNAANEIAVEAFLNEQIRFTDIVNVNRTVVENIAPIQVSEIADVLHIDKLARELAK
                     QAVLQL"
     gene            complement(15784..17982)
                     /gene="relA"
                     /locus_tag="PXE50_001039"
     CDS             complement(15784..17982)
                     /gene="relA"
                     /locus_tag="PXE50_001039"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP diphosphokinase"
                     /protein_id="HDL5621965.1"
                     /translation="MVAIRYSHQLEPNNFELSSWCASLNMSPVTFEQIHNAWSYAQEK
                     LDTDYSLMWYGIEMVEVLHGLNMDDDSLVAAMLFPLVKHNVIDLVQLKEDFSNDIKNL
                     VKGVLEMENIRQLSANNVSDLQIDNIRRMLLAMVDDFRCVVIKLAERIAYLRDSNHHS
                     EEDTVLAAKECSHVYAPLANRLGIGQLKWELEDYCFRILHPVSYTQIAKFELGERRVD
                     RERYIANFVADLTACLSPEIKNVQIYGRPKHIYSIWKKMQKKRLRFNQLFDIRAVRVI
                     VPTLEDCYTALGIIHTKYTHLPEHFDDYIANPKPNGYQSIHTVVLGEGEKTIEVQIRT
                     QQMHDDAELGVAAHWKYKEGATAGRSGYEEKIVWLRKLLEWQNDLADSGDMVAEMRSQ
                     IFDDRVYVFTPRGEVIDLPQKATPLDFAYAIHSEIGHRCIGAKVAGRIVPFTYHLQMG
                     DQVEIITQKEPNPSRDWLNPNTGFVNTGKARSKIIAWFKKLDREKNIPIGKEALEAEM
                     EKFGFTLKQIEEYALPRYNLKQFDDLYAGIGGGDIRLHQLMHFLQSKLIKPTAEQEDE
                     AVLKQVNKNTNQPKPSKGYVIVEGVGNLMHSIARCCQPIPGDEIVGYITQGRGISIHR
                     ADCEQLFELQSLNPERVVEADWGEGYTSGLSLTIRVIANDRNGLLRDVSAIMANEKVN
                     VLGVSSRTDVKRSLATIDMEIQLNNVEILNKLLARIAQLDDVIEAKRLSS"
     gene            18236..19543
                     /locus_tag="PXE50_001040"
     CDS             18236..19543
                     /locus_tag="PXE50_001040"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HDL5621966.1"
                     /translation="MTILALGINHKTASVGLREKVAFVDDKRKLALEQIQTSGLAESV
                     VILSTCNRTELYFHQPNISPREESEENIQWREQCFRWFAQIHQLDESELRECLYFKQN
                     LEAANHLMKVASGLDSLILGEPQILGQVKQAYQYSEDFYQHQQKAMSTKLSRLFQRTF
                     ATAKRVRSETEIGSQAVSVAYAACGLARQIFDNFGKLRFLLVGAGETIELVARYLIQH
                     GAKNIMLANRTHIRAEMLAEKLNAPMQILSLSALQLGLNQADVVISSTGSPDTLISKE
                     MVEIAQKQRQFDPLLLIDIAVPRDIDEKAGDLEGVYAYSVDDLQNIIQRNMAQREEAA
                     KQAAEIVKEESKAFFEWLKQQQSSDLIKRYRQDAEQTRQELLEKALQAISQGQDSQKV
                     LSELSYKLTNQLLHAPTQALQAMAKSGNSTGLQSFSRALRLEE"
     gene            19728..>21181
                     /gene="der"
                     /locus_tag="PXE50_001041"
     CDS             19728..>21181
                     /gene="der"
                     /locus_tag="PXE50_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HDL5621967.1"
                     /translation="MTPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGH
                     ANIAGYDFIVIDTGGIDGTEEGVEEKMAEQSLLAIEEADVVLFLVDARAGLLPADVGI
                     AQYLRQREKTTVVVANKTDGIDADSHCAEFYQLGLGEVEQIAAAQGRGVTQLIEQVLA
                     PLGEQLNAEQFNQEQAGENAKNVANEETDEWDTEFDFENEEDAALLDEALAEEAEESI
                     EDKNIKIAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGQQYTIID
                     TAGVRKRGKVNLAVEKFSVIKTLQAIQDANVVLLTIEAREGISDQDLSLLGFILNAGR
                     SLVIVVNKWDGLSQDIKDQVKSELDRRLDFIDFARVHFISALHGSGVGNLFDSVKEAY
                     ACATQKTSTSMLTRILRMAADEHQPPLVNGRRVKLKYAHPGGYNPPIIVIHGNQVEKL
                     ADSYKRYLSNYFRKSLKIIGSPIRILFQEGNNPFA"
BASE COUNT         6059 a         4565 c         4243 g         6314 t
ORIGIN      
        1 tctggataaa ccagaattag tctctgtctc attctttgtg aataatttaa ttgcagtgtt
       61 attgcaatct gatttttcac gaaaattaaa tctgacagta cataaactta tttatattgc
      121 accaatactg attatacttc aaataatgcc ttggttttat gcactccaat ggctttcaac
      181 catcactgca tttctctatt tagtgatttt tgccactatt accgtgtatg cgaatacggc
      241 actatctaat atgctagtga aattagacaa tggtaaaaac caaggcttaa tgtttggaag
      301 ctctaaatta attttagcta ttaccactct cggagtaatg aatgtattac cttacatttt
      361 cttaatctaa gcagggtaaa tcacgcccaa actcacggct ttttttgctc ctgtcacgct
      421 aggcatatta ctgggtaaat tatggattcg ctggtaagct aaccaagcaa aagcggcagc
      481 ctctacataa tcaatatcta aaccaaattc tgtagtggtt gtaacctccc actcgggaag
      541 taaagcagaa atccgttcca ttaataacgg atttcttgac ccaccaccac aaactaaaag
      601 caagcgaggc agagagcttt caaagcgtaa taactcattg gcaatacttt gagcagtaaa
      661 ttctgccagc gtgcgttgca catcttgtgg ctgacaagcg gtcaaatttt ccaatttttt
      721 tgcaagccac gttaaattaa acagctcccg cccagtgctt ttaggcgggg ctttagcaaa
      781 aaacgactcg tctaataacg tcgctaacag ttcagtattg agcttgcccg ttctcgccca
      841 ttcgccgttt ttatcgtatc ttttgccttg atgttgttcg atccaactat ccatcaaagt
      901 atttccggct cctacatcat aaccaactgt aggggaattg ggatttaaca ccgaaatatt
      961 gctgatgccg ccaatattca gcaccactgt tagacgattt ggatcgctaa aaatagcttg
     1021 atgaaatgcc ggcacaagcg gagccccttg cccacctact gccatatctt tacgccgaaa
     1081 atcagcgata gtggtaatac cggtttgctc tgccaccaaa ttcatatcgc caatttgggt
     1141 ggtgaaggga tactcagaat ccggtgaatg ccacaccgtc tgcccgtgac aacctatggc
     1201 ttgaatatct tctgctttta gctgattttt cgctaaaaac gcattgatcg tttctgcata
     1261 aagcaagcct aaacggtgat caatttcccc cagtttttgg agattggttt cgccggtttt
     1321 aagtaacgca gaaatatccg cccgtaattc ctccggcatt ggaaaaaaat cacaagcggt
     1381 cattttcggt ggattttttg caaaatccag caaagcaata tccaccccat caaggctcgt
     1441 gccggacatt acgcctatat agtaatttgg gctatattca ttcatcataa aaatcaacat
     1501 ctgctatttg ttacttttct ttgctttgcc aaagaaaagt aaccaaaaga aaggcaaccc
     1561 gagcttcacc gctatcctcg cttagtttga attggcttaa cggcaaattt acattcgctc
     1621 cgctcagagt aaatttacct accaattcaa acacgctcag gcggttcaga cgggaacaaa
     1681 aaacaacaaa atcattggcg tgccattctt agattttccg gcacttcctc aaaattcgat
     1741 ctaaacggat tgatgtctag cccgcctcgt ctggtgtagc gtgcgtaaac tgttaatttt
     1801 tccggctcgg caaattgcat taaatcacag aaaatgcgtt ccacacattg ttcgtggaac
     1861 tcattatgct cacggaacga cactaaataa cgtaacagtt tttcacggtt tagctttttg
     1921 cctttgtagc gaatttgcac acttccccag tcaggctgtg acgtaattaa gcagttagat
     1981 ttgagcaaat ggctgactaa ggtttcttcc accaactcat cttctgcaat gttctctaaa
     2041 taatgagtcg aaaacgcata actgtcgatt tgaatatctt gctcatcaat gcaatcgcct
     2101 gcaaaatcaa ctatcggctg ttgcgtgtag tgtgataatt ggtaaatttt taccgaaacc
     2161 tgaccgcttg cacagcgagc cagatccgct tgaatcgttt tcccaacttc ttctattgag
     2221 ctaaatttgg tttggttaaa actgttcaaa tagagcttga aacttttcga ttcaattaag
     2281 ttttcgctct taaaatcaat ggcgacatct gcaatcgcta cttgcggtag cccattttgg
     2341 ttcaaccaag atagctcata gcaagtccac acatcagccc ctcggttaaa aggctgctct
     2401 tgtgtaatgc ctaaactatc acggtttaat ttacgaggaa caggttgcaa aagcgaggca
     2461 tcatattcgc ttttgtactc ggttttttgc cctaatttca gggcggaaag ggatttatcg
     2521 ttataattca ttgctttatt taatatattt tactaaatca actaaactat ctaacaccaa
     2581 atcggcttta gcctgaccct cttccgtcac tgctttgtca gtgcgaacca gcactttggt
     2641 tttcacgccg gcggcttctg cggcaaggat atcttctaat ttatcgccca ccatataaga
     2701 ttggcttggg tcgatgttta aatcttgaat cgcttgagta aacatacctg ctttaggctt
     2761 acggcaatca caatctttac ggtattcgcc tttgccttcg gggtgatgtg ggcagtagta
     2821 aataccgtct agtaccacgc cataatcttc atcgagcgac cagtccatcc attcggttag
     2881 ttgcataaat tgtgcttcgc taaaatagcc tcgggcaatg ccagattgat tggttaccag
     2941 caccaataaa taacctttgt cttgtagctg ttttaacgcc ttgccgacac cgtcaataaa
     3001 ttgaaaatca tcaatttgat gcacatagcc gtgatcgata ttaattgtgc cgtcacggtc
     3061 taaaaaaatg gctttttttc ccattagcga ccccgtagat aatccacgat catttggtga
     3121 tgttcgccgg ttttaaattt atcaaacact tgctcaaccc ccccctgctc atcaattaaa
     3181 aaactgatgc gatgaatgcc gtcataggtt tttcccataa atttcttttc gccccataca
     3241 ccaaaggctt ctgcaacttg gtgatccggg tcagataata aggtaaaatt aagtgctttt
     3301 ttctctacaa attgagctaa ttttttcggt aaatcggtgc taattccgag aacaaccaca
     3361 ttgagctcat caagttctga tttgctgtca cgcagtccgc acgcttgcgt agtgcaaccg
     3421 ggtgtaagag ctttcggata aaaataaacc agtacttttt tgccggcaaa ttgagagaga
     3481 gaaaccggct cgtcagcctg attctgaagg gtaaatttag gggctttatc gcctgcttgt
     3541 aagatattca tttgtaattt ttccataaaa aataaccgct tgcattatac acggcaagcg
     3601 gtcaaacttg gcaaaaaatt tgcaaaatgc ggttgtttta tgttgttgaa aatgatggac
     3661 ggtattgatt ttccgaacgc aacatttctt tcaatacctt gtcaaaatcg ctttcaaata
     3721 atctgtcttg aacaatgcgg tatttctcaa attcgctttc tgcgtgcaat ttcgcttcat
     3781 caaaacgcat tttgcctttg ccctcaagaa cgccgttcag ataaccaaat ttcacgaatt
     3841 tctgccagca actgctcaaa ataatcttca tttaaaaatg taccattttc cattctttgg
     3901 cggtcaatca catagccttt ttgggcgaaa ttccgtaata ctttagttgc ccattggcga
     3961 aattgtgtcg cccgcaccga gtttacccta tagcctatcg aaataacggc atcaaagttg
     4021 tagtgtttgg tacgataatt tttgacatct gcggcagtta ccgagaaatc ctcggtaact
     4081 gaatttggat cgagttccct actattaaaa atgtttttta aatgcaaaga aacattatct
     4141 gttgagcaat caaaaagctg agcaattaat ttttgcgtaa gccaaatttc gttatcttca
     4201 tagcgaacgg taatattttc tgccccattt tgttgagtaa aaatcaaaaa ttcggcggta
     4261 ctattacgga tttgtttatc gatcataagc tctccttatt gtgaaggcta tgctactaaa
     4321 tactgttttt ttgtctagta aaaaatgagg atttttcgac gcagatcaca aaaaacgcct
     4381 gtaatttagc attacaatgc ggtctttttt tagtcgtttt tttgcaaatt attccaaaaa
     4441 tccttccagt aattcattta aaaacaattt accgtgttgg gtaatttgcc aatgggttgc
     4501 ggtttcggaa atatagtttt ggtttaacgc ccaatcgatt gtcgggcgaa caacttccct
     4561 gtctaaccct gtaaaccatt caaattcttg ttttggtgtc gcttcaagta atctaaagcg
     4621 gttcataaaa aactcaaacg ggcggtcgtc taattcaatc aaatcttggc tgtagcgata
     4681 ttcacctcgc atataacctt tcgggtgttt gattttgcta aagcgataaa tttccccggt
     4741 cggatatgaa attttgccgt gagcgccaca accaatcgcc aaataatccc caaatcgcca
     4801 ataatttaaa ttgtgtctgc attggtagcc ttttttggca taagccgagg tttcatactg
     4861 ctcatagccg gcattcgtta aaagttgatg cccttgctcg aaaatatccc ataactcgtc
     4921 atcatcaggc aaggttggct tacgataata gaacatcgta ttcggctcaa tcgtgagctg
     4981 ataccacgat aaatgcggtg gattgagtga aatccctgtt tctaaatccg ccaaggcttg
     5041 tttaaccgat tggtttggta agccgtgcat taaatcaatg ttgaaacttt gcaagcccga
     5101 ttttgcagaa ttttgggcaa atttaatcgc ttgttttgct tcatttgcat cgtgaatccg
     5161 tcctaatttc aataattttt ccggctcaaa actttggatt cccattgaaa tgcgggttac
     5221 gccaccttgt gcgtaaccta aaaatcgctc tgcctctgcg gttcccgggt tcgcttccag
     5281 tgtaatttcg atatttggct cgaatgcaat ccgtttttct acttcaatta ataaataagc
     5341 tatcccttcc gctgaaaata agctcggggt gccgccgcca ataaaaatag aatataattt
     5401 acgatcacct attgccactc ggtaagcggt caaatcttgg gataaatctg caagtaaatg
     5461 ttcgatatat tcttgctcgg gaattaatcc tttttgagcg tgcgagttaa aatcgcaata
     5521 agggcatttt tgcacgcacc aagggatatg gatataaagg cttaaaggcg gtaaaatcag
     5581 gttcactgtc aatttttcat ttatgattaa attggcgaat aataacgaaa agcacgtgaa
     5641 gtgaaaagca aagattttcg tgagctagat cacaaattca ataattcttg ctttaccact
     5701 ttgacattaa tgatatgata aattcaattc aaaaaagtgc attttttgat aaattcactt
     5761 cagcaaataa taccgcccct atcataaaaa cttaaaggag ctttaagatg aaaaaacagt
     5821 ttgaacacaa cgaatcccgc cgtggtttta tgaaactaat tgcaggtgtc ggtgccggta
     5881 tggcatttag tggcacttta ggtacattta cacctaaagc atttgcagcc cctgccgccg
     5941 gctcaacgat tgaggccggt atagcttatc ccatatcaac cggatttgac ccgcttacct
     6001 caagcggtgc atcctcaatg gcggcaaacc tccatatttt tgaaggcctc gtggacttac
     6061 atccagccac tcgcaaacca tatttagcat tggcagcagc agagcctgaa aaaattgatg
     6121 atgtaaccta tcgaattact ttacgtgacg gggctaaatt ccacaatggt aatccggtta
     6181 ccactgaaga cgtagtttac tcatttgaac gtgtattaga cccagctaaa gcatcacttt
     6241 tcgcacaatt cattccattt attgacactg tgaaaaaagt tgatgacaaa gtggttgaat
     6301 tcaaattgaa atatccattt gcgttattca aagagcgcct aaccattgtt aaaatcgtac
     6361 caaaagcagt ggtagaagcc ggtcaagctg catttgatgc taatccagtg gggactggcc
     6421 catataaatt tgtatccgca actaaagatg atcgtattgt tttcgaagca tttgcagatt
     6481 ataacggtgg ctacccggca caagtcgaga aaatgacttg gttcttactt tctgatgatg
     6541 ccgctcgtgt aaccgctcaa gaatctggcc gtgttcaagc aattgagtct gtgccttact
     6601 tagatgcaga acgcttaaaa cgtaaaggta ccgttgagtc agtacaatca ttcggcttac
     6661 tgttcttaat gtttaactgt gaaaaagcac cgtttaacaa cccgaaagtt cgccaagcgt
     6721 tacattatgg cttagatacc caaaaattaa ttgatgtggt gttcttaggc aatgcaaaag
     6781 ctgctacatc ttacgtgcaa gatactcacc cggattatgt gaaagcaaat tcgcaatatg
     6841 atttcgataa agcgaaagcc gaagcgttat tagcagaagc gggtgtgaca gagttaaaat
     6901 ttgaattgtt ggcaaccgat cactcttggg tgaaagaatg tgcgccatta attcttgaat
     6961 cgtggaacag cttaaaaggc gtgaaagttt cactcaaaca cttacaatca ggtgcattat
     7021 atggcacaca cgttgataaa ggtgcatacg aagttgtgat tgcacctggc gacccatcag
     7081 ttttcggtaa tgacttagac ctattattaa gctggtggta tcgtggtgat gtatggccga
     7141 aacgtcgttt ccgctggtct gaaacagctg aatatgcaga agtacaaaaa ctgcttgatg
     7201 aagcggccaa aaatcctgct gcttctaaag aagcctgggc gaaagcaatc aatattatcg
     7261 ctgaacaagt gcctctttac ccaattattc accgtaaatt gccaactgcg tggaatgata
     7321 aggcattaac aggtttccaa ccattaccaa caacaggtat gtcatttatc ggtgttggtc
     7381 gtgctaaata gtcgtaacgg ctagctaaat gcaagcggta atattttaca aaaaatttac
     7441 cgcttgcata aataaaaatc aaaatgatgt aatattcgtc ttatatcact cagaattctt
     7501 accatttcta tattttcatt tataatccta catatcacta tattagcttg taggtaaact
     7561 tagatttaat tttggagtgt aactacactc aaggagaaga aaatggaaat tatactccga
     7621 ttattatggc gtcgcctaat ggctctgccg gtaatgatct taggcgtaac tgccttggta
     7681 tttattgttt tacaattcac ccccggagat ccggcaaccg ttgctctcgg tgaaagcgcc
     7741 agcgaagccg ctaaagaaat ctatcgtgaa caacatgggt taaatgatcc attgcttgta
     7801 caatattttc gctttttagg gaatttattc gtattagatt tcggtatgac aacccctcca
     7861 gaacagccta ttgttgatat gattgctaaa gcattccctt taacattaca gcttaccttt
     7921 attggggtct tcttagctgc tatcgtctct ttcacattag gtgtaacggc agcactttac
     7981 cgtgatactt ggattgatca attaatccgt ttaatctcgg ttgccgctgt tgccacacct
     8041 tctttctggt tgggtatttt attgattcaa tacttctcct taaaattaga ttggttgcct
     8101 tcaggcggtt ttattccatt tagcgaagat ccaaaaggct atgtaaactc aatggttctc
     8161 ccttcactcg ctttagctgt tcctgtatgt gcctcattga tccgtgtcgt gcgtacaaca
     8221 atggtagaag aaatggataa agattatgtt cgaacagcca tcggtaatgg tgtaccttac
     8281 tcaacggtga ttcgccacaa cgtgcttcgt aatgccttaa ttactccggt aacagtatta
     8341 ggtttacggg ttggttattt attaggtggt gcagttgtga ttgaacagat cttcgactta
     8401 ccgggaatgg gtaaattaat tttcaacggt atcgtcaatc acgacttgaa cttagtgcaa
     8461 ggtgtagtat taactatcgc atttactttc gtgttggtga atatcattgt tgatattctt
     8521 tacttgctca ttaatccaaa aattcggagt ttataatatg tttcgccaag gattagctgc
     8581 tcgacttgct tcaggcggtg caagatttag agcattatca accagctcaa aaatcgcctt
     8641 actctttatt gtatttatcg cattagtcgc tatttttgca ccattagtag cgccttatga
     8701 cccactgcaa acgctacgtc cagtgcaagc tccaagcggt gattatttat tcggtacaga
     8761 ccgtttagga cgtgatattt tctcgcgtat ggtatgggga gcaagaacat ctctctttat
     8821 cggtttaggt gcggtaggcg ttgcgattct attcggtagt attttagggg caactgcggc
     8881 aaccgccgat aaattcggta acgaagtgat tatgcgtttt atggatatct taatggcatt
     8941 cccgggtatc gcattagctg ctgtattact tgccactttc ggtaactctg tacctgtgat
     9001 tatcgtgact attgcggttg tttacactcc ccaacttgcc cgagtggtgc gtgctaacgt
     9061 agtatctcaa tgggaagaag attatgtgcg tgccgagcgt gtaattggtg gtagccgtac
     9121 ttatattcta ttaaaacacg ttgtgcgtaa tactgctgca ccggttttag tattcgcaac
     9181 agtgatggtt gctgatgcca tcgtatttga agcatcactt tcattcttag gtgcaggtgt
     9241 ccagcctcca ttcccatctt ggggaaatat cttatctgaa ggtcgtaacc ttgtattaag
     9301 tggcttctgg tgggctacaa ctttcgcagg gattatgatt ttattaaccg tacttgcgtt
     9361 aaatatcctt gctgaaggct taaccgatgc gttagtaaat ccaaaactaa aacgttcaac
     9421 tcaaagtaaa gaagatgtcg caaaaccatt ggcaacagac gttcaagaag caatgtctga
     9481 aactcttgcg ttaaaacgtt acttactcaa attacacgag aaagaaacga cccgtactga
     9541 ccgtatgcaa ttaaactcaa cggccaaacc gattttacaa gtgaaaaact tatcaatccg
     9601 tttcccaaat cgttatggtg aaactccgct tgttgataat atcagcttta ctgttcacga
     9661 aggcgaaacc atgggcttag tgggtgaatc tggttgtggt aaatcaatca ccgcattctc
     9721 aattatgggt ttattaccaa aaactgcaaa aatcactggt gaaatcctct ttaccgaccg
     9781 ttcaggtaaa caacacaatc ttttagaatc agccgattta aatgcccttc gtggtcacga
     9841 aatctcgatg atttaccaag atgcattaag tgcgttaaac ccatcaatgc gtattaaaga
     9901 ccaaatggca caattaatca gccgtggtgg taaacaatca gcagaaacat tattgcaatg
     9961 ggtaaaactt gacccggaaa aaacgctcaa ccgttatcct cacgagttat ctggaggaca
    10021 acgtcagcgt gtattaattg caatggcact tgctcgtgaa ccgaaactat tgattgctga
    10081 tgaaccaaca acagcattag acgtaaccgt tcaagctgaa gtgatcaaat tattaaacga
    10141 attacgtgag aaacttggat ttgcaatggt attcgtgagc cacgacttag ctttagtggc
    10201 acaaatcgct caccacatca cggtaatgta tgctggtcaa gtggttgaaa ctgcaccaac
    10261 tacgccatta ttggcaaacc caacacacga atacacacgt ggattattag gctcggtact
    10321 ttctaccgaa ttgcgtgcag aacgcctata ccaaattccg ggcagtgtgc cttcaccatt
    10381 tgattttgcg aaaggtgacc gttttgcgag tcgttcatta agaccagatg caaaccctga
    10441 acagcacttg aaattagtgc caaccggtga tcacccacaa cacttctggg cttcacactt
    10501 agaagatcca caatctaaag aagcataaag gagagcaata cgatgagtat gaaatttatc
    10561 aaagaacagc caattattga actgtctaat attgttgtgc aatttgcttc tcgtgacggc
    10621 accttattta acccgaaaaa attcacggcg gtaaatgatg tcagcctagc aattcacgcc
    10681 ggtgaaacag tcggtctggt tggacaatct ggttgtggca aatctacttt agccagtgtg
    10741 atgatcgggc ttcaaaaacc aacctccggc acagtaaaat ttaacggctt agagatgaaa
    10801 tatggcagtg cggaagctcg caaatatttc ggtagccaag tgtcagtaat tttccaagac
    10861 ccggcaaccg ccctaaatcc gcgtatgcgt gtgttggata ttttaaaaga tccgatggat
    10921 attcataata tcttacaacc gcaagaacgt gagaagcggg tttatgattt gctctctcga
    10981 gtcggtctac ctcgttcagc ggcgttggtc gagccaaccc gattatctgg tgggcaaaag
    11041 caacgtgtag cgattgctcg tgcattggca ttaaatccga agctgattgt ggctgatgaa
    11101 ccaacctctg cacttgacgt atcggttcga gctcaagtac tgaacctgct ggcagacttg
    11161 aaaaaagaac tcaatttagc gatggtattt atctctcacg acttacaaac cgttcaccaa
    11221 gtttcagacc gcattgtggt tatgaacggc ggtaaaattg tggaaatggg cgatgcttca
    11281 gacgtatttg aacgcccaac gcaagagtac acccgaacct taattgaagc agcaccatct
    11341 ttattataat tgtgctttgt gcctacaagc ggtaaaattt ttcgcaaatt ttaccgcttg
    11401 tgtttttatt tatgatccaa attacccaaa ccattaacat tgatttatta attgtcggct
    11461 ctggcatcgc tgggctttct gctgcagttg aggcaaaaga aaaaggcatt aataccttac
    11521 tgattagcaa atctacgatt ggctcgggag cgagctactt tccgcttaag gcaacacttg
    11581 gcattcaagt aaccggcgat gaagccgata aaattcactt taaagaagat attgaaaaca
    11641 tcggcaaagg caaaatcaac cctaatgtgg tacaagccta tatcgaagat tcaccacaag
    11701 cgattgaact actccaccgt atcggctttc agccttggaa gcgtaacgac aaccgtccgg
    11761 cttgttttgc caaataccct cgcccaattt atttaattaa agattggcgg gaatctgccc
    11821 tacgagcgaa acagattttg caagagcaac acattgcttt ctatgaaaat gctacccttt
    11881 tacacatcgt cacagacaat aaccaagtgc aaggtgcggt attttcgctc actacaagcg
    11941 gtcaaatttc ctatattttt tgcaaaacca agcatcttat tttagccgca ggcgggattg
    12001 ctgggctgta taaagataat ctctacccgg ctgatgttat cggttcactt cattatgtgg
    12061 cacaacaagc cggggcaacc ttggttaatc ttgcctttat tcagttcatt cctgcctttg
    12121 tcgagccaaa atacaaggtg ctatttggcg aacatacatt gaaatatgtc acccaaatca
    12181 ccgattctaa gggtaacaat ctatttccac acttaaatgc cgagcaattt gcaaaaatgg
    12241 tgctggaacg tagccattat gctcctttca gccttgattt tgccggcgtg gagttcgatt
    12301 tagtgatgat gaaacatttg cttgaaaacc ctcacgaaaa aggcatttac cttaaataca
    12361 gccccaaact gtatgaagac acggaagagt tttataccgt ctatttgaat tggctcaaaa
    12421 atgaagtcgg gattgattta gtgcaagata agattgcaat caagccgttt gctcatagct
    12481 gtaacggcgg cattcaaatt aatcaatggg gcgaaagtgc agtaaaaggg ctatttgcga
    12541 ttggtgagat ttctcactgc attgaagggg caaaccgtat gggtggtaac tcagtcggcg
    12601 gtggcttagt gtttgccaaa cgtgcggtat cggaaattgt tcgttcgcta gaacagaatg
    12661 atttgcaaaa aaacagcgaa atctcaccgc ttgcaatggc agaaaaagca ttaaatcagc
    12721 ttgctaattc aactgctaat ctagaactaa ctgccagtga agtgctttct actattcgag
    12781 agaaaatggc gttatacgcc aatgtgtacc gcactcggag caacctcaaa ctactacttg
    12841 aggaattaaa ccgtttggaa caagaatttg acccaatcta tcacgctcaa tatcaaggca
    12901 ttgaaattta caatgcgtta aaaaccgctc aattagtggt caatcaaatg ctaaatgagc
    12961 agagtttagg cgcgcactac ttagatgaac aaaattagtc tataatagcc aacttattta
    13021 aaaataataa attaggagta taaatgaata actacctact taaattaaaa ccaatgacag
    13081 cggtcatact ttcgcttttg acggtcttta tcttaggttt tacaatgatt gggcttggct
    13141 gggtgcctca aatttcaatt ctagccgtga ttgtaatgct gctacttttc ggcttaatca
    13201 ataaaattcc gtttaaaaat atgcaagagg gtatggcaag cgggctgatg tccagtattg
    13261 gtgcggttta cctattcttt tttattggat tattggtttc agctttgatg atgtctggtg
    13321 cgattccaac cttaatgtat tatggcttaa gtgtgatttc acctgaatta ttttacattt
    13381 ctgcattcgc attaagttct gtagtaggta ttgcgttagg cagtagttta accacaaccg
    13441 ccaccatcgg tgttgctttt atcggtatgg cttctgcttt cggtgcgaac cctgcgattg
    13501 tagcaggtgc ggtggtttca ggggcgtttt ttggcgataa aacctctcca ctttcagaca
    13561 ctactaccat tgctgcttcc gtagtgggca ttgatatgtt cgctcatatc cgtaatatgc
    13621 tttataccac catccctgcg tggattttaa cagcattatt cctttggttt ttaaccgaac
    13681 ctactgatgc acaaaattta gcaaatatag agaacctaaa aaccaatttg caagaaacag
    13741 gattaataca cggctactct ttgctacctt ttgttacgtt aattttaatg gcaattaagc
    13801 gtgttaattc aatttatatt attgtaacta cagtaacact ctcgctaatt attacctata
    13861 tccacagttc gccaaccctt gaacagctag ggaattattt ctttaccagc tataaacctg
    13921 ttgaaggcgt agatttaggc gaagtggcat cattagtctc tcgtggtggc attaatagta
    13981 tgttctttac catcactatt gtattgcttg cgttaagttt aggtggtctt ttacaaatcc
    14041 tcggcatttt accggcacta cttaacggca ttagcggctt tttaaccagc acaggacgtg
    14101 ttactcttgt agttgccagc actgcggtgg gaattaacgt cttaatcggt gagcaatatt
    14161 tgagcttatt gttatcaggt aatactttcc gctcaactta tgaacgttta ggcttagaag
    14221 tgaaaaactt atctcgcacc attgaagatg caggcacggt aatcaaccca ttagtccctt
    14281 ggggcgtgtg cggtgtgttt atcagtagcg tattaaatgt accggtgtta gattatctac
    14341 catacgcatt cttctgttat atctgtttaa tccttacctt aatttttgga tttaccgggg
    14401 taacaatcag taaaaaagct aactaatatg tgaaaaatgc ctacaaattt gtaggcattt
    14461 tcttttcatt agagctgaag aacagcttgt ttggctaact ctctggcgag tttatcaata
    14521 tgcaatacat cagcaatttc actgacttga attggagcaa tattttccac caccgttcta
    14581 ttcacgttca caatatccgt aaagcggatt tgctcgttta aaaacgcctc aacggcaatt
    14641 tcattggcgg cattcatcgc tgttgtcgca tactgtcctt ctgcaaaagc ctcaatcgct
    14701 aattttaagt tcgggtaacg ggcaaaatcc ggctcgataa aggttagctc ttttaattta
    14761 aagaaatcta atggtggcac accagcatta attcggtttg gatatgccat cgtgtgagca
    14821 atcggcgtac acatatccgg gttgcccatt tgagcaatca ccgagccatc aatataacgc
    14881 accatcgaat gaataattga ttgtgggtga atgatgatat ccatttcctc ggctgttgca
    14941 ttaaacaacc agcgggcttc aatatactcc aagcctttgt tcatcattgt ggctgaatcg
    15001 actgaaattt tcttacccat agaccaattg gggtgagcaa ctgcttgagc cggtgtaatc
    15061 gcatcaaatt catttaatgg cttagtacgg aacggtccac ccgatcctgt taaaataatt
    15121 ttactgacac ccagttcagc gagtggacaa aacccgactt tttgctgtgc ctccggtgga
    15181 agcgattgga aaatcgcatt gtgttcacta tctaccggta agagcttcgc accggattta
    15241 cgagcctcat caataaaaat ttgcccacag gttaccagcg attctttatt tgccaacaat
    15301 acggttttac ccgctttcac cgcagaaagt gtcggtaata accctgctgc tcctacaata
    15361 gcagccatta ccatatccac ttcggaatgt gcagcaagct cacaaatagc tgcttgaccg
    15421 gctaacactt cagttttaga ccccaaagtt gccaatgccg tttttaatgc ttgtgcggat
    15481 ttttcatcat ccattgccgc aaaagtcggc tgatattgac gacattgctc cagcattaat
    15541 tcaacattct ttccaccaac taacgcaaac acctcatatt ggtttgggtt tgggttatgc
    15601 tcaactaccg ataaagtgct tttaccgata gaacctgttg aacctaaaat cactaatttt
    15661 ttcattttgt ttctctttat ctaatgactg ataagggcga aagatttttc gcccctacgc
    15721 cgtaattatg cggatactca ttcgttgttt gtaaattgtt tagcaaaaac aaccgcttgt
    15781 agattaactc gaaagccgtt ttgcttcgat aacatcatct aattgagcga tacgagccaa
    15841 taatttattc aaaatttcaa cgttgttaag ctgaatttcc atatcaatgg tggcaaggct
    15901 acgtttcaca tcggttcggc tggaaacgcc taacacgttt actttttcat ttgccataat
    15961 tgcactgaca tctcgcagta agccgttgcg gtcattggca atcactcgaa tggttaagct
    16021 taaaccagag gtatagcctt cgccccaatc cgcctccaca actcgttctg ggttgagact
    16081 ttgtaattca aacagttgct cacaatctgc acggtgaatc gaaatccctc tgccttgtgt
    16141 gatgtaaccc acgatttcat cacccggaat cggctggcag caacgggcaa tggaatgcat
    16201 taagttccct acgccctcta caatcacata gcctttgctt ggcttcggct gattggtgtt
    16261 tttattcacc tgtttaagta ccgcttcgtc ttcttgttcg gcggtcggtt taattaattt
    16321 tgattgcaag aagtgcatta actgatgaag acgaatatcg ccaccgccaa taccggcata
    16381 gagatcatca aactgtttta agttatagcg aggcagagca tattcttcaa tttgcttgag
    16441 cgtaaaaccg aatttttcca tttcggcttc aagggcctct ttgccgattg gaatattttt
    16501 ctctcggtct aattttttaa accacgcaat aatttttgag cgagctttgc ctgtattcac
    16561 aaaaccggta ttcggattga gccaatctcg gcttgggttc ggctcttttt gggtgataat
    16621 ttcaacctga tcgcccattt gcagatgata agtaaacggc acaatccgcc ctgccacttt
    16681 tgctccaatg caacgatgcc cgatttcact atgaattgca taagcaaaat caagtggtgt
    16741 agctttttgc ggtaaatcga tcacctcgcc tcttggggta aagacataaa cacgatcatc
    16801 aaaaatttgc gaacgcattt ctgccaccat atcgcctgaa tcggcaagat cgttttgcca
    16861 ctcaagcaat ttgcgtagcc acacgatttt ttcttcgtag cccgaacgcc ctgcggttgc
    16921 cccctcttta tatttccagt gagcggctac gcctagctcc gcatcatcgt gcatttgctg
    16981 ggtacgaatt tgcacttcaa tcgttttttc accttcgcct aatacaactg tatgaataga
    17041 ctgataaccg ttaggttttg ggttagcaat ataatcatcg aaatgttccg gcaaatgggt
    17101 atatttggtg tgaataatgc ctaatgccgt gtagcaatct tctaacgttg gcactattac
    17161 ccgcacagcc cgaatatcga aaagctgatt aaatctcaac cgttttttct gcattttctt
    17221 ccaaatgctg tagatatgtt tcgggcgtcc ataaatctgc acattcttga tttcaggact
    17281 taaacaagcg gtcagatctg ctacaaaatt tgcaatataa cgctcacgat ccacacggcg
    17341 ttcgcccaat tcaaatttag caatttgagt gtaagagaca gggtgtaaaa tgcggaaaca
    17401 gtaatcttcc agctcccatt tgagctgccc gatacccaat cgattggcaa gcggtgcata
    17461 aacgtgagaa cattctttag cggcgagaac ggtatcttct tcggaatggt ggttactatc
    17521 acgcaggtag gcaattcgtt cggcaagttt aatcaccaca cagcggaaat cgtccaccat
    17581 cgccaacaac atgcgacgga tattgtcgat ttgcagatcc gacacattat tggcactaag
    17641 ctggcggata ttctccattt cgagtacgcc tttaactaag tttttgatgt cgttactgaa
    17701 atcttctttt aattgcacca agtcgatcac attgtgtttt accagaggaa aaagcattgc
    17761 ggcaactaag ctgtcatcgt ccatattcaa gccgtgcaat acttcaacca tctcaatgcc
    17821 ataccacatc agactatagt cggtatccag tttttcctgt gcataactcc acgcattgtg
    17881 aatctgctca aaagtcacag gagacatatt caggcttgca caccaactcg acaactcaaa
    17941 attattcggt tcaagttgat gggaataacg aattgctacc ataaggcctc cttgtaaatt
    18001 tttgtggaaa ttagaccgct tgtacagctt aaaatggagt tttattatac gtggaaattc
    18061 agaaaaaatt tacccctaat cgaaaattta atccaagtta tcttatcctc tttactcctt
    18121 aagaggtagc aaccttgtga taaatcaaac ctatcaacac aatcatttgc acgacttcac
    18181 gctcttgatt aaaatacttg cgtttttatt ttgatcttta tttttgtggg tagcaatgac
    18241 aattttagct ttaggaatca accataaaac cgcctctgtg ggtttaagag agaaagtggc
    18301 gtttgtagat gacaaacgta aactggctct tgaacaaatc caaacgagcg gattggctga
    18361 aagcgtggtc attctctcta cctgcaaccg caccgagctc tacttccacc agcctaatat
    18421 ttctccccgt gaagagagcg aggaaaatat ccaatggcgt gaacaatgtt tccgctggtt
    18481 tgcccaaatt catcaacttg atgaaagcga gttgcgtgaa tgtttatatt ttaaacaaaa
    18541 tttagaagcc gctaaccact taatgaaagt ggcaagcgga ttagattcac taattttagg
    18601 cgaaccacaa attttagggc aggttaaaca agcctatcaa tatagcgaag atttctacca
    18661 acatcagcaa aaagcgatgt ccaccaagct atcacgcttg ttccaacgca cctttgccac
    18721 cgcaaaacga gtacgttccg aaaccgaaat cggcagccaa gcggtgtcag ttgcttatgc
    18781 agcttgcggt ttagcccgtc aaattttcga taattttggc aagttacgct ttttgctggt
    18841 aggggcaggc gaaaccattg aattagtcgc ccgctattta attcaacacg gggcgaaaaa
    18901 tataatgttg gcaaaccgca cccatattcg ggcggaaatg ttggcggaaa aactaaacgc
    18961 tccaatgcaa attctgtcgt taagtgcttt gcaactcggt ttaaaccaag ctgatgtagt
    19021 tattagctcc accggtagcc ctgataccct aatcagtaaa gaaatggtgg aaattgcgca
    19081 aaaacaacgc caatttgacc cacttttgct gattgatatt gccgttcctc gtgatattga
    19141 cgaaaaagcc ggcgacttag agggcgttta cgcttatagt gttgatgatt tacaaaatat
    19201 tatccaacgc aatatggctc agcgtgaaga agccgccaaa caagccgctg aaatcgtcaa
    19261 agaggaaagc aaagcatttt ttgaatggtt aaaacaacag cagtctagtg atttaatcaa
    19321 acgctatcgt caagatgcgg agcaaacccg ccaagaattg ttggagaaag ccctacaagc
    19381 aatcagtcaa gggcaagaca gccaaaaagt attaagtgag ctaagctaca aactcaccaa
    19441 ccagttacta cacgccccaa cccaagcgtt acaagcaatg gcaaaaagtg gcaactccac
    19501 cggcttacaa agtttttcaa gagcattacg gctagaagaa tgatgctcag cacattcttt
    19561 taggcatatt tgcaaaaaat tgaacatttt taaccgcttg cggacgcacg ccgtgcgtcc
    19621 ctccccgtgt tcccgatctt cttctaattt caacttcccc aaatttccgc tataataagc
    19681 caatttttgc aactattttg caaataaccg gatatagagg atacaaaatg actcctgttg
    19741 ttgccctagt gggcagacct aatgtcggca aatcgacttt atttaaccgt ttaacccgta
    19801 ctcgagatgc cttagtagca gatttccccg gcttaacccg agaccgtaaa tatggtcacg
    19861 ctaatattgc cggctacgat ttcattgtaa tcgacaccgg tggtattgat ggtacagagg
    19921 aaggcgtgga agaaaaaatg gcggaacaat ctttattggc gattgaagaa gccgatgtgg
    19981 tgcttttctt ggttgatgcc cgagccggat tattacctgc cgatgtcggc attgctcaat
    20041 atttacgcca acgtgaaaaa accacggtgg tggttgccaa taaaaccgat ggtattgatg
    20101 ccgactctca ctgtgccgaa ttctatcaat taggcttagg cgaagtagaa caaattgctg
    20161 cagcacaagg gcgtggggtt acgcagctta tcgagcaagt gttagctcct ttaggcgaac
    20221 agctaaatgc cgagcaattt aaccaagaac aagcgggcga aaatgctaaa aatgttgcaa
    20281 atgaagaaac agacgaatgg gataccgaat tcgactttga gaacgaagaa gatgcggcat
    20341 tattagatga agccttggca gaagaagcag aagagtcgat tgaagataaa aatatcaaaa
    20401 ttgcgattgt cggtcgtccg aatgttggta aatcaacact gaccaaccgc attttaggcg
    20461 aagagcgtgt ggtagtttat gatatgccag gaacaacccg tgattctatt tatattccaa
    20521 tggagcgtga cggtcagcaa tataccatca ttgataccgc cggtgtgcgt aaacgtggca
    20581 aagtgaattt agcggttgag aaattctcgg taattaaaac cttgcaagcc attcaagatg
    20641 caaacgtggt gctattaact attgaggccc gagaaggtat ttccgatcag gatttatcac
    20701 tactcggctt tattctaaat gctggtcgtt cattggtgat tgtggtaaac aaatgggacg
    20761 gcttgtcgca agatattaaa gatcaagtga aatcagagtt agatcgccgt ttagatttta
    20821 ttgattttgc cagagtgcat tttatctcgg cattgcacgg ctcaggcgtg gggaatttgt
    20881 ttgattcagt aaaagaagcc tacgcttgtg caacgcaaaa aacctcgacc tcaatgctga
    20941 ctcgcatttt gcgtatggct gctgatgaac accaaccacc attggttaat ggtcgccgag
    21001 tgaaattaaa atatgctcac ccgggtggct acaacccacc aattattgtg attcacggca
    21061 atcaggttga aaaattagcg gattcttaca aacgttattt aagtaattat ttccgtaaaa
    21121 gtttaaaaat tatcggctcg ccaattcgga ttttattcca agaaggcaat aatccttttg
    21181 c
//
LOCUS       DANLZQ010000030        20990 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.030, whole genome shotgun sequence.
ACCESSION   DANLZQ010000030 DANLZQ010000000
VERSION     DANLZQ010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 20990)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20990)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20990
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.030"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(161..1510)
                     /locus_tag="PXE50_001042"
     CDS             complement(161..1510)
                     /locus_tag="PXE50_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HDL5621968.1"
                     /translation="MLLFIMFAAIILLLVLIMKFKVHAFVALIIVSLLTALAAGIPVD
                     KILPTLLNGFGSTLASVALLVGLGAMIGRLLEITGGAKVLADTLINKFGKERAPFALG
                     VASLLFGFPIFFDAGLVVMLPIIFSVAKQFGGSVLRYAFPSAGAFAVMHAFLPPHPGP
                     VASGDLLGVNMGLLVLVGLVCAIPTWYIGTYLFSQFISKRIHVDLPKAFLNGLSANEM
                     AVQNPPSFGKVLTVLVLPIILILFDTGLNTLSVAKVIDGSEMWVQSLRLIGKTPVALL
                     ITLIVAIMLLRDNRSFDQIEKICNNALGPICSIVLVTGAGGMFGGVLRASGIGDVLSE
                     MMKDTGMPIVVAAFIIATVFRVAQGSATVALTTTAALIAPTVAAATDLSQFDLCFIVI
                     AIASGATVLSHVNDSGFWLMSRFLEMDEKTTLKTWTMLETAIGLTGFACALIGSWLL"
     gene            1697..2212
                     /locus_tag="PXE50_001043"
     CDS             1697..2212
                     /locus_tag="PXE50_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HDL5621969.1"
                     /translation="MANGKAFILMGVSSTGKTSVGTAVAQRLGIKLIDGDDLHPRANI
                     LKMASGTPLNDADRTPWLERINDAVFSFEQKSEKGIIVCSALKKKYRDQIRQGNADVT
                     FLFLHGSFELVLARMQQRKGHFMKPEMLQSQFNTLEIPQADEPDVIFIDIDGSFDEVV
                     ERCVKAVEPLL"
     gene            complement(2266..3265)
                     /gene="gntR"
                     /locus_tag="PXE50_001044"
                     /pseudo
     CDS             complement(2266..3265)
                     /gene="gntR"
                     /locus_tag="PXE50_001044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674159.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate operon transcriptional repressor GntR"
     gene            complement(3358..4518)
                     /locus_tag="PXE50_001045"
     CDS             complement(3358..4518)
                     /locus_tag="PXE50_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator"
                     /protein_id="HDL5621970.1"
                     /translation="MIEQSYKIALLFNANKIYDRGVMQGIGQFIQASQCTWDIFVEDD
                     FVYHKNSIESLSIDGIIADFDDLETVELLKDIDVPIVAVGGSYQNPDYYPDLPYVATD
                     NYALVEAAFLHLKQKGINQFAFYGYPAETEKHWAIERKNAFIQLMEKYEHHPNCYIGD
                     QFHSDNWVELQAKLGEWLQTLPAHTGIIAVTDARARHLLQTCEHLKIAVPEQLCVIGI
                     DNEELIQYLSRVSLSSVTQGTSQIGYHAAKLLYRKLNNLPVSTKPILIPPVKVEERRS
                     TDYRSLQDPMVIQAMHFIRHRACQGIKVEQVLDHLKISRSNLEQRFKQEMNKTIHQVI
                     HEEKLARATYMLKFTEISTQEIANVCGYPSLQYFYAVFKKEFGKTPKEFRQE"
     gene            complement(4641..5027)
                     /gene="rplQ"
                     /locus_tag="PXE50_001046"
     CDS             complement(4641..5027)
                     /gene="rplQ"
                     /locus_tag="PXE50_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HDL5621971.1"
                     /translation="MRHRKSGRQLNRNSSHRQAMFRNMASALVEHEIIKTTLPKAKEL
                     RRVVEPLITLAKADSVANRRLAFARTRNVDTVAKLFNELGPRFAQRAGGYTRILKCGF
                     RAGDNAPMAYIELVDRPEVATEAAAE"
     gene            complement(5063..6052)
                     /gene="rpoA"
                     /locus_tag="PXE50_001047"
     CDS             complement(5063..6052)
                     /gene="rpoA"
                     /locus_tag="PXE50_001047"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005970247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HDL5621972.1"
                     /translation="MQGSVTEFLKPHLVNIEQVSSTHAKVTLEPLERGFGHTLGNALR
                     RILLSSMPGCAVTEVEIDGVLHEYSSKEGVQEDILEVLLNLKGLAVKVQNKDDIILTL
                     NKSGIGPVTAADITHDGDVEIVNPDHVICHLTDKNASINMRIRVQRGRGYVPASARLH
                     TQNDDRPIGRLLVDARFSPVDRIAYNVEAARVEQRTDLDKLVIEMETNGTLDPEEAIR
                     RAATILAEQLAAFVDLRDVRQPEVKEEKPEFDPILLRPVDDLELTVRSANCLKAETIH
                     YIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASIAED"
     gene            complement(6083..6709)
                     /gene="rpsD"
                     /locus_tag="PXE50_001048"
     CDS             complement(6083..6709)
                     /gene="rpsD"
                     /locus_tag="PXE50_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004410410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HDL5621973.1"
                     /translation="MARYLGPKLKLSRREGTDLFLKSGVRAIESKCRNRLDVAPGQHG
                     ARKPRLSDYGSQLREKQKVRRIYGILERQFRNYYTEANRLKGNTGENLLVLLEGRLDN
                     VVYRMGFAATRAEARQLVSHKSIVVNGRVVNIPSFQVSVDDVVAVREKSKKQARIKAS
                     LELATQREKPTWLEVDATKMEGVFKRRPERSDLSADINEHLIVELYSK"
     gene            complement(6738..7127)
                     /gene="rpsK"
                     /locus_tag="PXE50_001049"
     CDS             complement(6738..7127)
                     /gene="rpsK"
                     /locus_tag="PXE50_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HDL5621974.1"
                     /translation="MAKTPVRARKRVKKQIADGVAHIHASFNNTIVTITDRQGNALAW
                     ATAGGSGFRGSRKSTPFAAQVAAERCAEMVKEFGLKNLEVMVKGPGPGRESTIRALNA
                     AGFRITNITDVTPIPHNGCRPPKKRRV"
     gene            complement(7144..7500)
                     /gene="rpsM"
                     /locus_tag="PXE50_001050"
     CDS             complement(7144..7500)
                     /gene="rpsM"
                     /locus_tag="PXE50_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019935869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HDL5621975.1"
                     /translation="MARIAGINIPDQKHTVIALTAIYGIGKTRAKAICAATGIAEDVK
                     IRELSEEQIEKLREEVGKFTVEGDLRREVTLSIKRLLDLGCYRGLRHRRSLPVRGQRT
                     KTNARTRKGPRKPIKK"
     gene            complement(7638..7751)
                     /gene="rpmJ"
                     /locus_tag="PXE50_001051"
     CDS             complement(7638..7751)
                     /gene="rpmJ"
                     /locus_tag="PXE50_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006232360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HDL5621976.1"
                     /translation="MKVRASVKRMCRNCKVIKREGVVRVICSDPKHKQRQG"
     gene            complement(7776..9095)
                     /gene="secY"
                     /locus_tag="PXE50_001052"
     CDS             complement(7776..9095)
                     /gene="secY"
                     /locus_tag="PXE50_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HDL5621977.1"
                     /translation="MAKQPGYQGSTQKGTGELKSRLLFVLGALIVFRIGSFIPVPGID
                     ASVLSELIRQQQGTIIDMFNMFSGGALSRASIFALGIMPYISASIIIQLLTAIHPPLA
                     ELKKEGEAGRRKISKYTRYGTLLLAFIQSIGISLALPNMVHGLVPNPSILFYVTSVVS
                     LVTGTMFLMWLGEQITERGIGNGISLIIFTGIVADLPATIGQTIEQARQGELSFIVLL
                     LVAIIAFAVTYFVVFVERGQRRIVVNYASRQQGRMMAPARTSHLPLKVNMAGVIPAIF
                     ASSIILFPASITQWFGQSEGFEWLFNLSQLLQPGQPLYVVLFTMAVIFFAFFYTGMQY
                     NPRDTADNLKKSGAFVPGYRPGEQTSRYIDKVMTRLTLIGALYIAFVCLVPYIITSLW
                     KVPFQLGGTSLLIVVVVIMDFIAQVQSHLMSQQYDSVLKKANLKGLN"
     gene            complement(9098..9532)
                     /gene="rplO"
                     /locus_tag="PXE50_001053"
     CDS             complement(9098..9532)
                     /gene="rplO"
                     /locus_tag="PXE50_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011095501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HDL5621978.1"
                     /translation="MRLNSLSPAEGAKHSAKRLGRGIGSGLGKTGGRGHKGQKSRTGG
                     GVRRGFEGGQMPLYRRLPKFGFTSLKSFHVAEIRLNDLAKVDGNEVTLETLKAANIIT
                     KDILSAKVILAGKIERAVVVKGLRVTKGAKAAIEAAGGSIEE"
     gene            complement(9537..9713)
                     /gene="rpmD"
                     /locus_tag="PXE50_001054"
     CDS             complement(9537..9713)
                     /gene="rpmD"
                     /locus_tag="PXE50_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012147215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HDL5621979.1"
                     /translation="MAKIKVTQTRSSIARLPKHKATLKGLGLRHIRHTVELEDTPAVR
                     GMINQVSYMVKVEE"
     gene            complement(9720..10220)
                     /gene="rpsE"
                     /locus_tag="PXE50_001055"
     CDS             complement(9720..10220)
                     /gene="rpsE"
                     /locus_tag="PXE50_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004106339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HDL5621980.1"
                     /translation="MSNIEKQAGELQEKLIAVNRVSKTVKGGRIMSFTALTVVGDGNG
                     RVGFGHGKAREVPAAIQKAMEKARRNMINVALNEGTLQHPVKGSHTGSRVFMQPASEG
                     TGIIAGGAMRAVLEVAGVRNVLSKAYGSTNPINVVRATIDALENMKSPEMVAAKRGKT
                     VEEILG"
     gene            complement(10235..10588)
                     /gene="rplR"
                     /locus_tag="PXE50_001056"
     CDS             complement(10235..10588)
                     /gene="rplR"
                     /locus_tag="PXE50_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005970258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HDL5621981.1"
                     /translation="MDKKVARIRRASRARHLMREQGATRLVVHRTPRHIYAQVIAPNG
                     SEVLAAASTVEKVIKEQVKYTGNKEAAAVVGKIVAERAIAKGIKAVAFDRSGFKYHGR
                     VQSLADAAREAGLQF"
     gene            complement(10603..11136)
                     /gene="rplF"
                     /locus_tag="PXE50_001057"
     CDS             complement(10603..11136)
                     /gene="rplF"
                     /locus_tag="PXE50_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003031129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HDL5621982.1"
                     /translation="MSRVAKAPVNIPAGVEVKLNGQLLTVKGKNGELSREIHNAVEVK
                     QEADALTFAPREGIANADAQAGTARALVNNMVIGVTEGFTKKLQLVGVGYRAQMKGNA
                     VALSLGFSHPVEHTLPAGVTGECPSQTEIILKSADKQLIGQVAADIRAYRKPEPYKGK
                     GVRYSDEVVRTKEAKKK"
     gene            complement(11153..11545)
                     /gene="rpsH"
                     /locus_tag="PXE50_001058"
     CDS             complement(11153..11545)
                     /gene="rpsH"
                     /locus_tag="PXE50_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HDL5621983.1"
                     /translation="MSMQDPIADMLTRIRNGQAANKVAISMPSSKLKVAIANVLAEEG
                     YIESVKVVEGVKPELEITLKYFQNKPVVESIQRVSRPGLRIYKRKDELPKVMGGLGIA
                     VVSTSKGVMTDRAARQAGLGGEIICYVA"
     gene            complement(11582..11887)
                     /gene="rpsN"
                     /locus_tag="PXE50_001059"
     CDS             complement(11582..11887)
                     /gene="rpsN"
                     /locus_tag="PXE50_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HDL5621984.1"
                     /translation="MAKQSMIARDVKRAKLADKFYAKREELKKIISDVNASDEDRWAA
                     VLKLQTLPRDSSPIRQRNRCRQTGRPHGVLRKFGLSRIKVREAAMRGEIPGLKKASW"
     gene            complement(11899..12438)
                     /gene="rplE"
                     /locus_tag="PXE50_001060"
     CDS             complement(11899..12438)
                     /gene="rplE"
                     /locus_tag="PXE50_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HDL5621985.1"
                     /translation="MAKLHDYYRDTVVNELKAKFNYSSVMQVPRIEKITLNMGVGEAL
                     TDKKLLDNAVADLAAISGQKPLVTKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFER
                     LITIAVPRIRDFRGLNAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTSA
                     KTDEEGQALLAAFNFPFRK"
     gene            complement(12456..12767)
                     /gene="rplX"
                     /locus_tag="PXE50_001061"
     CDS             complement(12456..12767)
                     /gene="rplX"
                     /locus_tag="PXE50_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000729185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HDL5621986.1"
                     /translation="MAAKIRQNDEVIVLTGKDKGKRGKVTKVLPNGKVFVEGINIITK
                     HEKPVPALGKAGGLVKKEAAIDVSNVAIFNPETNKADRVGFRFEDGKKVRFFKSNEKT
                     I"
     gene            complement(12778..13149)
                     /gene="rplN"
                     /locus_tag="PXE50_001062"
     CDS             complement(12778..13149)
                     /gene="rplN"
                     /locus_tag="PXE50_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012728338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HDL5621987.1"
                     /translation="MIQEQTMLDVADNSGARSVMCIKVLGGSHRRYAAIGDIIKVTVK
                     EAIPRGKVKKGDVLKAVVVRTKKGVRRPDGAVIRFDGNACVILNNNTEQPIGTRIFGP
                     VTRELRSEKFMKIISLAPEVL"
     gene            complement(13372..15207)
                     /gene="glmS"
                     /locus_tag="PXE50_001063"
     CDS             complement(13372..15207)
                     /gene="glmS"
                     /locus_tag="PXE50_001063"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HDL5621988.1"
                     /translation="MCGIVGAVAQRDIAEILVDGLHRLEYRGYDSAGVAVLNADDKTM
                     QIVRRVGKVKALDEALDTKPLLGGTGIAHTRWATHGEPSETNAHPHRSGKIAVVHNGI
                     IENYEELKIVLQERGYVFQSQTDTEVIAHLVEWELRSASSLLEAVQKTVVQLRGAYGT
                     VVLNEEEPEHLIVARSGSPLVIGYGVGENFLASDPLALLSVTRRFAYLEEGDVAEITR
                     RTVDIYDREGNKAEREIHEGNFEADAADKGQYRHYMQKEIFEQPVAIMNTLDGRIKDG
                     KVDISAIAPNAAEILSKVEHVQIVACGTSYNAGMVSRYWFESIAGVSCDVEIASEFRY
                     RKFVTRPNSLLITLSQSGETADTLAALRLAKESGYMAAMTVCNVASSSLVRESDFAFL
                     TKAGVEIGVASTKAFTTQLTCLLLLNVAIGRLQGRMSEEQEHHIVQSLQRLPAQIESA
                     LVFDKQIEKLSEDFADKHHTLFLGRGEYYPVAMESALKLKEISYIHAEAYAAGELKHG
                     PLALIDSDMPVVVVAPENDLLEKVKSNIEEVRARGGQLYVFADHDAGFEEAEGFKTIV
                     MPKVDEVTAPIFYTVPLQLLSYHIALIKGTDVDQPRNLAKAVTVE"
     gene            complement(15255..16016)
                     /locus_tag="PXE50_001064"
     CDS             complement(15255..16016)
                     /locus_tag="PXE50_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR family transcriptional regulator"
                     /protein_id="HDL5621989.1"
                     /translation="MSKRNTQQRRHLIVQMVQEKNEVSVDELAHFFETSEVTIRKDLT
                     ALEESGFLLRKYGGAVKIPSEMMEEAFIEQLSIQKKMIAQAARDCIRDHNRIIIDSGS
                     TTGALVKALNQTGLVVMTNSLNLATELTSLECEPTVLMTGGTWDSRSESFQGKVAEQV
                     LRSYDFDQLFIGADGLDLARGTTTFNELVGLSQVMAEVSREVIVLIESQKIGRKMPNI
                     ELKWQNITKIITDSQLSFETKEQIEKMGVEVVIAK"
     gene            complement(16173..16373)
                     /locus_tag="PXE50_001065"
     CDS             complement(16173..16373)
                     /locus_tag="PXE50_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HDL5621990.1"
                     /translation="MKSILKVVGAMVLMVAVSGCNNMTKTQRNTAIGAAIGGVAGHAI
                     GESTGATLGGAALGGVIGSQIK"
     gene            16598..17632
                     /locus_tag="PXE50_001066"
     CDS             16598..17632
                     /locus_tag="PXE50_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5621991.1"
                     /translation="MKLKKLSLALSTLLLGSAFANSALAEGRLTVYCSATNELCEQEV
                     QAFGKKYNVKVAFVRNGSGSTLAKIEAEKNNPQADVWYGGTLDPHSQAAEMGLLEPYK
                     SPNLEQIIEKFRDPAKLKGNYSSAVYMGILGYGVNLDRIKKLGIEKVPSTWEDLLDPR
                     LAGEIQIADPQSSGTAYTAIATFVQLLGEEKAFDYFRKLHKNISQYTKSGITPARNTA
                     RGETAIGIGFLHDYAIEKKNGANIEMTAPTDGTGYELGGVSILKGARNLDNAKLFVDW
                     SLSKEAQELSWQKGNAFQVLTNTTAESSPYALDPKNLNLINYDFEKYGSSEERKRLID
                     KWVNEVKLAK"
     gene            17700..19736
                     /locus_tag="PXE50_001067"
     CDS             17700..19736
                     /locus_tag="PXE50_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016534092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDL5621992.1"
                     /translation="MQNFSFSRPLVWVLIGLLGFLLLPSKALDYGLFDSTSDELLAAM
                     GWASLNITWAWFLPLLVFLLPNSTACKTRAKLELVGLGVLFAFIFLSAIVLKISLGYA
                     VLPLIIAIMGLATPNLATLKVMQGDRFIIGSLLSIILLIFFFIVYPTIAIFVSMFYNG
                     SEFVPSQVLTILQQPYVVRVIGNSLSVAGTVGVLSTLFGLAFALYTTRIAKRSAFIGR
                     IFSILPIVTPPFVVGLGVTLMLGRSGYVTEFLVDYFGFANNWLYGFTGIVIAHTLALT
                     PMSFMILEGALKSIHPSVEEAAYTLRSNRYQAFFNIIFPLLKPALANSFLVVAIQSLA
                     DFSTPLVLGGSFDVIATQIYFYIAGSQLDYASASTLGAILLVFSLAIFVIQYLWIGNR
                     SYVTVSGKSYRGDVQDLPSGMKWLIICTLLFWGTFNLVLYGSIFYGSFTVNWGVDYTL
                     TLDNYIKLFGQGFSDGGFPSLIQTVIFAAAAAPITALFGLLIAYVTVRRDFKGKKTLE
                     FLTLLCFAVPGTVAGVSYILAFNDAPIYLTGTGMIIILSMVMRNMPVGMRAAIAGLGQ
                     LDKSLDEASLSLKAGSFKTMLFVVLPLLKPALLSALVTSFVRAMTTVSAIVFLVTADT
                     RVATSYILNRVEDGEYGIAIAYGSILIVVMMAIILIFDWIVGDTRIARSKAKKM"
     gene            19834..20883
                     /gene="fbpC"
                     /locus_tag="PXE50_001068"
     CDS             19834..20883
                     /gene="fbpC"
                     /locus_tag="PXE50_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric ABC transporter ATP-binding protein"
                     /protein_id="HDL5621993.1"
                     /translation="MNNDFLVLKNVTKSFGKVTVIDNLNLSIPQGKMVTLLGPSGCGK
                     TTVLRLVAGLENPTSGQIFIDGEDVTQSSIQHRDICIVFQSYALFPHMSIGDNVGYGL
                     KMQGVPKEERLQRVKEALELVDLGGFEDRFVDQISGGQQQRVALARALILKPKVLLFD
                     EPLSNLDANLRRSMREKIRELQQRLNITSLYVTHDQSEAFAVSDEVIVMNKGKIMQKA
                     PAKELYLRPNSLFLANFMGESSIFEGTIAGNQININGYQFTLANAEQFELPDGEYLVG
                     IRPEAIHLAEQGNISQLCKIKNAVYMGNHWEIIAEWEGKDLLVNTKPENFYPHIKQAY
                     VHFIEQGVFLLKKEL"
BASE COUNT         5930 a         4686 c         4166 g         6208 t
ORIGIN      
        1 taatgcagca gaaaggtttt ggaataattt acaaaatatt cagtttataa atgaagatat
       61 attaaataaa ccctaacatt ctataataag aaaaagcggt cgattctctg ccaaattttg
      121 caaattttag aagaaaacag accgcttgtc agggttggaa ttagagtaac cagctgccaa
      181 tcaatgcaca ggcaaaaccg gttaaaccga tggcagtttc aagcattgtc cacgttttga
      241 gggtagtttt ttcgtccatt tcaaggaaac ggctcatcag ccagaaaccg gagtcattga
      301 cgtgggaaag caccgtcgca ccggaggcga tagcaatcac gataaaacag aggtcgaact
      361 ggcttaaatc agtcgctgcc gccacagttg gcgcaatcaa cgctgctgtg gtggttaaag
      421 caacggttgc cgagccttgt gcgacacgga ataccgtagc aataataaag gcggcaacca
      481 caatcggcat tccggtgtct ttcatcattt ccgataatac atcgccaatc ccgctggcac
      541 gcaacacgcc accaaacatt ccgcctgcac cggttactaa gacaatcgag cagattgggc
      601 caagggcatt gttacagatt ttttcgattt ggtcgaaact gcgattatcc cgcaacagca
      661 taatcgccac aattaaggta atcagtaaag caacaggggt tttgccgatt aagcgaaggc
      721 tctgcaccca catttcactg ccatcaatca ctttagcaac ggagagggta ttcaagccgg
      781 tatcaaacaa aatcaggata atcggcagca ccaacaccgt gagtaccttg ccaaaacttg
      841 gcgggttttg tactgccatt tcgtttgccg ataagccgtt taaaaacgct ttcggcaaat
      901 caacgtgaat gcgtttgctg ataaattggc tgaacaggta agtgccgata taccacgttg
      961 ggattgcaca aaccaagccc accaagacta acagccccat attcacacca agcagatcgc
     1021 cggaggcaac cgggccgggg tgcggaggta gaaaggcgtg cattaccgca aacgcaccgg
     1081 cagacggaaa cgcatagcgc aacaccgaac cgccgaactg ttttgccacg ctaaaaataa
     1141 tcggtaacat caccaccaag ccggcatcaa agaaaatcgg gaagccgaat aacagcgagg
     1201 caacgcccaa cgcaaaaggc gcacgttctt tgccgaattt attgataagc gtatccgcaa
     1261 gcactttcgc cccgccggtg atttcaagca agcgaccaat catcgcccca agccccacca
     1321 gtaacgccac tgatgccagc gtactaccaa aaccattcaa caatgttggc aggattttat
     1381 ctaccggaat accggcagct aatgcagtga gcaggctcac aataatcaat gccacaaaag
     1441 cgtggacttt aaatttcata atcagcacca gcaataaaat gatggcagca aacataatga
     1501 acagtaacat aggatctcct aaggttgaat tgttatcggt aacataacca aaaagcagtt
     1561 tagagtaaac ggttgcaggg cttttatttt aaaaatgtga tctacttcaa gttttctgga
     1621 aatagcagat gatttttcag cataacctgt tacattaacg gctaagttaa cgttaccagt
     1681 aacacaagga aattcaatgg caaacggcaa agcatttatt ttgatgggcg tgtccagcac
     1741 cggcaaaacc agcgtgggaa cggcagtcgc acagcggttg ggaataaaat tgattgatgg
     1801 ggacgactta caccctcgtg ccaatatact gaaaatggca agtggcacgc cactcaatga
     1861 tgcagatcgc acaccgtggt tggagcggat taacgatgca gtgttcagtt ttgaacaaaa
     1921 aagcgaaaaa gggattatcg tctgctcagc attgaagaaa aagtaccgag accagatccg
     1981 acaaggcaat gccgatgtga cttttctatt cttgcacggc tcgtttgaac tggtgctggc
     2041 tcgaatgcaa caacgcaaag ggcattttat gaaaccggaa atgcttcaaa gccaatttaa
     2101 tacgctggaa attccgcagg cagacgaacc agatgtgata tttattgata ttgacggcag
     2161 ttttgacgag gtggtggagc gttgcgtgaa agcagttgag ccgttgcttt aatcacaagt
     2221 ggtggatttt gcggattttt ttgcaaattt aaccgcttgt ccgggctaca cactttcccc
     2281 caaatggatc tgatagccca agttaattat ggagctttgt tgtggtacgc cgtgaatacg
     2341 gttgagcagc tcttgggcgg caactctgcc tatttcaagg cgaggtgtga tgacgctggc
     2401 aagctgtggc gtgagggatt gcccgacatc gtgtccgtga aagccggcga ttttaatctg
     2461 ctgcggcaca tgaatgccta accgttggca ctcaaataat gccccgattg ccaaatcgtc
     2521 attggtgcaa aaaatgccgt ctagctgcgg aatgtgttgc agggcttgtt ttagctggct
     2581 tgcgccaagc gtgaaagaag aatgctctgc agtagtaatg ctgtgtgggc ttaagccgtg
     2641 tttgagcatt gcctgttcgt agccctgcat tttcagctga gagcgtttat ccattctcgc
     2701 cccgaaatac accacctgtc ggcagcctcg atgaatcatt gtctcgacca ttgcttgagc
     2761 cgcagaaata ttgtcaatat ccgaccgctt gttgaatgcc acattcgccg ctttccatta
     2821 tctcaatcac cggaatattc gccacttcca gcattttcaa ggtgcggggc gagtggtgat
     2881 tttccgataa gataatgccg tcaatattgt acgaaagcag cgactcaatc cgctgctctt
     2941 ccttttgttc gctgtaacca tagtgggcga gcatggtttg atagctggct tggtcggtaa
     3001 tctgctcaat gcctttaatc acatcggcaa acacttgatt ggtaagcgaa ggaaccagca
     3061 cgccaattgc acggcttttg gcattcgaga gaatatccgg tgcacggttt gggatatagc
     3121 caaacagctc aatcgcttgt gcaatccgct cgccggtctc cttggcaacg gtgtttggat
     3181 cccgcaaaaa gcgactgacc gtcattttgg taatgccgag atgggtagcg atgtcttgca
     3241 aagttgggcg tttcggtttt ctcattggaa tagataacga aaaaatttaa tttcgctgat
     3301 tataactgaa gataaggcaa taattgcaaa atattcggtg aaattgaccg cttgttacta
     3361 ctcttgcctg aactctttcg gggttttacc aaactctttt ttaaacacgg catagaaata
     3421 ttgtaaagag ggataaccgc acacattggc aatttcttgg gtcgaaatct cggtaaattt
     3481 gagcatatat gttgctcttg ctaatttttc ctcgtgaatc acctggtgaa ttgtcttatt
     3541 catttcctgc ttaaaacgct gttcaaggtt agagcgggaa attttaagat gatccagtac
     3601 ttgctctact ttaatgcctt ggcaagctcg gtgacgaata aagtgcatag cttggattac
     3661 cattgggtct tgcaaagaac gataatcggt cgaacggcgt tcttccactt ttaccggcgg
     3721 gattaaaatc ggcttggttg aaaccggtag attatttaat tttcgatata ataacttcgc
     3781 agcgtgatag ccgatttgtg atgttccttg tgtgactgaa gaaagagaaa cccgagagag
     3841 gtattgaatc aactcttcgt tatcaatgcc gatcacgcaa agttgttcag gtacagcgat
     3901 ttttaaatgc tcacaggttt gaagcaggtg tcttgccctt gcgtcagtaa cggcaataat
     3961 gcccgtgtgg gctggtaagg tttgtaacca ctcgcctaat ttggcttgta attcaaccca
     4021 attatctgaa tgaaattgat caccaatata acaatttggg tgatgttcat atttttccat
     4081 caactgaata aaggcatttt ttcgctctat cgcccaatgt ttttccgttt ctgcaggata
     4141 gccgtaaaac gcaaattggt tgattccttt ttgttttagg tgtaaaaatg ctgcctcaac
     4201 taaggcgtaa ttgtcggtag caacataagg aaggtcaggg taatagtcag ggttttggta
     4261 agaaccgcct actgctacaa tggggacgtc aatatcttta agtagctcaa ctgtttccaa
     4321 atcgtcaaaa tcggcaataa tgccgtcaat cgacaggctt tcgatactat ttttatgata
     4381 gacaaaatca tcttccacaa aaatatccca agtacattgt gatgcttgaa taaactgccc
     4441 aatgccctgc attactcctc tgtcataaat tttgttagca ttaaaaagta aggcaatttt
     4501 ataagattgt tctatcatta cttcctccag tacccacttt caaaagtaac tataaaataa
     4561 aattattttt tgatcaaaac gaataaaaga ataaaacccc ggtatttcta ccagggtttt
     4621 aagctcaatt ttgattaaga ttattccgca gctgcttcag ttgcaacttc tgggcgatcc
     4681 actaactcaa tgtaagccat tggagcatta tcacctgcac ggaaaccaca ttttaaaatg
     4741 cgagtgtaac cacccgcacg ttgtgcaaaa cgtggaccta attcattgaa taatttagca
     4801 actgtatcaa cgttgcgtgt acgggcaaaa gctaaacggc gatttgcaac gctgtctgct
     4861 ttagctaaag taattaacgg ctcaactaca cggcgtaact ctttcgcttt tggtaaagtt
     4921 gtcttgatga tttcgtgttc aacaagcgca cttgccatat tacggaacat cgcttggcga
     4981 tggctgctgt tacggtttaa ttgacgtcca ctcttacgat ggcgcataac ctattccttc
     5041 ttagaaaatc tataccgaaa aactagtctt ctgcaatact tgcaggtggc cagttttcaa
     5101 ggcgcatacc gagtgataaa ccacgagaag caagaacatc cttaatctct gtaagagatt
     5161 ttttacccaa gttcggggtt ttaagaagtt caacttctgt acgttgtact aaatcaccga
     5221 tatagtgaat tgtctctgct ttcaaacagt tagcagaacg aactgtcagc tctaggtcat
     5281 ctactggacg aagaagaata ggatcaaatt ccggtttttc ttctttcact tcaggttgac
     5341 gaacatcacg caaatcaacg aatgcagcaa gttgttctgc taaaatcgtt gcagcacgac
     5401 ggatagcttc ttcaggatct aacgttccgt tagtttccat ctcaataaca agtttatcta
     5461 agtctgtacg ttgttcaaca cgagcagctt cgacattgta agcaatgcga tctacaggtg
     5521 aaaaacgtgc atctactaat aaacgaccga tagggcggtc atcgttttga gtatgaagac
     5581 gtgctgatgc aggaacataa cctcgaccac gttgaacacg aatgcgcata ttaattgatg
     5641 cattcttatc tgttaaatga cagattacgt gatcaggatt cacaatttct acatcgccat
     5701 cgtgtgtgat gtcggctgca gttacagggc caattccaga tttatttagt gtcaaaataa
     5761 tatcatcttt attttgcact tttaccgcta gacctttaag gtttaataat acctcaagaa
     5821 tatcttcctg aacgccttct ttgctgctgt actcatgcag tacaccatca atttcaactt
     5881 cagtaactgc acaacccggc atagatgaaa gtaaaatgcg gcgaagtgcg ttacctaatg
     5941 tatggccaaa accacgctct aacggctcta atgtcacttt agcatgagtt gaactaactt
     6001 gttcaatatt tactaagtgc ggctttaaaa attctgtcac agaaccctgc attttttcct
     6061 ctctttgcgg ttaagctaac tattatttag agtaaagctc aacgatcaga tgttcattaa
     6121 tatctgctga tagatcagaa cgctctggac gacgtttaaa tacgccttcc attttagttg
     6181 catcaacttc taaccaagtt ggtttttcac gttgagttgc taattctaat gatgctttaa
     6241 tacgtgcttg ttttttcgat ttttcacgaa cagcaacaac atcatcaaca gaaacttgga
     6301 atgaaggaat gtttactaca cgaccgttta ctacgattga tttatggcta acaagctgac
     6361 gtgcttctgc acgtgttgct gcaaaaccca tacgataaac tacgttatct aaacgacctt
     6421 ccaataatac tagtaagttt tcaccggtat taccttttaa gcggttcgct tctgtataat
     6481 aattacggaa ttgacgctct aagataccat aaatacggcg aactttttgt ttttcacgta
     6541 attgactacc atagtcagat aaacgtggct tgcgagcacc atgttgacca ggcgctacat
     6601 caagtctatt tctacatttt gattcaatcg cacgaacgcc tgattttaag aataaatcag
     6661 taccttcacg acggcttagc ttgagcttag gacccaaata tcttgccatt ttctttctcc
     6721 aattctttta acgtcaatta aacacgacgt tttttcggtg gacgacaacc gttatgtgga
     6781 atcggagtca catcagtaat attcgtgata cggaaacctg ctgcatttaa tgcacggatt
     6841 gttgactcac gacctggacc cggtccttta accataactt ccaaattctt taaaccaaac
     6901 tctttaacca tttctgcaca acgctctgca gcaacttgag cagcgaatgg agtcgattta
     6961 cgagaaccac ggaaacctga accacctgca gttgcccaag ctagagcatt accttgacgg
     7021 tcagtaatag taacgattgt gttattgaaa gatgcgtgga tatgagctac gccatctgca
     7081 atctgttttt ttacgcgctt acgtgcgcga actggtgttt tagccattat ttatctactc
     7141 cgactatttt ttgatcggtt tgcgtggacc tttacgggta cgcgcattag tcttagtacg
     7201 ttgaccacgt accggtaaac tacgacgatg acgtaaacca cggtagcaac ctaagtctaa
     7261 aagacgtttg atgcttaaag ttacttcacg acgtaaatcc ccttcgacag taaatttacc
     7321 aacttcttca cgcagttttt caatctgctc ttcagacaat tctctgatct ttacatcttc
     7381 agcaataccc gttgcagcac agatggcttt tgcacgagtt ttaccgatac cgtaaattgc
     7441 agttaatgcg attacagtgt gtttttgatc aggaatgtta atgcctgcaa tacgggccac
     7501 tatgcactcc tattatttaa gtttattgat atactgatct tgaaaagccc gtttcaggat
     7561 actcaaacag tatatcagga cgaatgagct gagcagtata actgctcagc gggttctttg
     7621 caagaaatat gcgtaaatta accttgacgt tgtttgtgtt taggatcgct acaaattaca
     7681 cgaaccacac cttcacgttt gattacttta caattacggc acattctttt tactgaagca
     7741 cgaactttca ttgcttatcc tttattaacg gcctattaat ttagaccttt taagttagct
     7801 ttcttcaaca cagaatcata ttgttgagac attaaatgac tctgaacctg tgcgatgaaa
     7861 tccataataa caaccactac aatcaataat gatgtaccac ctaattggaa tggcaccttc
     7921 cataacgacg taatgatgta aggaaccaaa caaacaaaag caatatataa cgcaccaatt
     7981 aaggttaaac gtgtcattac tttatcgata taacgagatg tttgttcgcc tggtcggtaa
     8041 cctggtacaa acgcacctga tttcttaaga ttatccgctg tatcacgagg attatactgc
     8101 attcctgtat aaaagaaagc aaagaaaatc actgccattg tgaataatac aacatacagt
     8161 ggttgacctg gctgtaatag ttgtgaaagg ttaaataacc actcaaatcc ttcgctttga
     8221 ccaaaccatt gagtaatgct tgccgggaat aaaataatac ttgaagcaaa aattgccggt
     8281 attacccctg ccatattcac ttttaatggt aagtgagaag ttcttgcagg cgccatcatt
     8341 cgaccttgtt ggcgacttgc atagtttaca actattcttc tttgtccacg ttcaacaaaa
     8401 acaacaaaat aagttactgc aaatgcaatt attgcaacta gtagtaagac gataaatgat
     8461 aactcgcctt gacgggcttg ttctattgtc tgccctatcg ttgctggaag atctgcaaca
     8521 atacctgtaa aaataatcaa tgagataccg tttccgatac cacgctcagt gatttgttcg
     8581 cctagccaca ttaggaacat tgttcctgtc actaagctta ctacagaggt tacatagaat
     8641 aatatacttg gattaggaac taatccatgt accatattcg gtagggctag tgaaatacca
     8701 atagattgaa taaatgctaa taacagtgtg ccatagcgtg tatatttact gattttccga
     8761 cgacctgctt caccttcttt ctttaattca gctagaggtg ggtgaatcgc tgtcaataat
     8821 tggataataa ttgacgctga aatataaggc ataataccta gtgcaaatat agatgcacgg
     8881 cttaaagcac caccagagaa catattaaac atatcaatga tggtgccttg ctgttgtcga
     8941 attaattcgg ataatacaga agcatcaatg ccaggaacag gtataaaaga accgatacgg
     9001 aaaacgatta acgcacctaa aacaaacaat agtcttgatt taagctcgcc agtccctttt
     9061 tgtgtactac cttggtaccc tggttgcttt gccatcttta ttcctcgata gaaccgccag
     9121 cagcttcaat agcagcttta gcgcctttag ttacacgtaa gcctttaaca actactgctc
     9181 tttcaatttt gcctgctaaa attactttag cagataaaat atctttagta atgatgtttg
     9241 ctgcttttaa tgtctctaaa gttacttcgt tgccatctac tttagctaag tcgtttaaac
     9301 gaatttcagc cacatggaat gattttaatg aagtaaaacc aaattttggc aaacgacgat
     9361 ataaaggcat ttgaccaccc tcgaaaccac gacgaacacc gccgcctgta cgagattttt
     9421 gacctttatg accgcgccca ccagttttac ctaaaccaga accaatacca cgacctagac
     9481 gttttgcact gtgcttagca ccttcagctg gagaaagaga atttaaacgc attctattac
     9541 tcctctactt taaccatata agacacttga ttgatcatac cacgcactgc tggtgtatct
     9601 tcaagttcta cagtatgacg aatatgacga agacctaagc cttttaacgt tgctttatgt
     9661 ttcggtaaac gagcgataga gctacgagtt tgagttactt taatttttgc catatccaat
     9721 taccccaaaa tttcttcaac tgttttgcca cgttttgcag caaccatttc aggtgatttc
     9781 atgttctcaa gtgcatcgat tgttgcacga acaacgttaa ttgggttagt tgaaccatac
     9841 gctttagaaa gaacgttacg aacacccgca acttctaata ctgcacgcat tgcaccacca
     9901 gcgatgatac ctgtaccttc acttgctggt tgcataaata cgcgtgaacc tgtatgtgaa
     9961 cctttaactg gatgttgtaa tgtaccttca tttaaagcta cattaatcat attgcgacga
    10021 gctttttcca tcgctttttg gattgctgct ggaacttcac gtgctttacc gtgaccaaaa
    10081 cctacacgac cgttaccatc gcccactact gttaaagcag tgaaactcat aatacgacca
    10141 ccttttacgg tttttgaaac acggttaacc gcgattagct tttcctgcag ttcaccagct
    10201 tgtttttcga tgtttgacat ctcaaattcc tctattagaa ctgtagacca gcttcacgag
    10261 cagcatctgc taatgattgc acacgaccgt ggtatttaaa accagaacgg tcaaaagcaa
    10321 ccgctttaat acctttggca attgcacgct cagcaacgat tttacccact actgctgcgg
    10381 cttctttatt gccggtatat ttaacttgct ctttaattac tttttcaaca gttgaagctg
    10441 ctgctagtac ttctgagcca ttaggtgcaa tcacctgcgc atagatatgg cgaggtgtgc
    10501 gatgcacaac taaacgtgtt gcaccttgct ctctcattaa atgacgtgca cggcttgcac
    10561 gacggatacg agctactttc ttatccatag tgttacctta ctttactttt tcttcgcttc
    10621 ttttgtacgc actacttcat cagagtaacg tacaccttta cctttataag gttcaggttt
    10681 gcgatatgca cgaatatctg ctgccacttg accaattaac tgtttgtcag cacttttcag
    10741 aataatttct gtttgtgatg gacattcacc agttacgcct gctggcaacg tgtgttctac
    10801 tgggtgagag aaacctaaac ttaaagcaac agcattgcct ttcatttgtg ctctataacc
    10861 aacacccact aattgcaatt tcttagtaaa gccttcagta accccgatta ccatattatt
    10921 tactagtgca cgagcagtac ctgcttgagc atctgcatta gcgatacctt cacgtggagc
    10981 gaaagttaat gcatctgctt cttgttttac ttcaactgca ttgtgaattt cacgagataa
    11041 ctcgccgttt ttacctttaa ctgttaatag ctgaccgtta agttttacct caacaccggc
    11101 aggaatatta acaggtgctt ttgcaacacg agacattttt cctacctctc tattatgcta
    11161 cgtaacagat aatttcaccg ccgaggcccg cttgacgcgc agcacggtcg gtcattacac
    11221 ctttagatgt agaaacaact gcgataccta aaccacccat tacttttggt aattcgtctt
    11281 tgcgtttata aatacgcaga cccggacggc tcacacgttg gatactttct acaaccggtt
    11341 tgttttggaa atattttaaa gtaatttcca gttcaggttt aacaccttca acaactttaa
    11401 cgctttcgat ataaccttct tcagctaaaa catttgcaat agcaactttt aacttagatg
    11461 aaggcatact gattgcaact ttgttcgcag cttgaccgtt acgaatacgg gtcagcatat
    11521 ctgcgattgg atcttgcatg ctcatgtatt tactcccatg attccaaatt aaaagaggtt
    11581 attaccagct tgccttctta agacccggaa tttcaccgcg catagcagct tcacgaacct
    11641 taatacggct taaaccaaac ttacgaagta cgccatgtgg acgaccagtt tggcggcaac
    11701 gattacgctg acggattggg ctagaatcac gaggaagtgt ttgtaatttt aacactgctg
    11761 cccaacggtc ttcatcagat gcattcacat cagagatgat tttctttaat tcttcacgtt
    11821 ttgcgtagaa tttatcagct aatttagcac gttttacatc gcgtgcgatc attgattgtt
    11881 ttgccacgat aacctacctt atttacggaa tgggaaattg aaagcagcta ataaagcttg
    11941 accttcttca tcagttttcg ctgaggtggt gatagtaata tctaaaccac gaacacgatc
    12001 tactttatcg tagtcgattt cagggaaaat gatttgttca cgaacaccca tactgtaatt
    12061 accacgacca tcgaatgact tagcgtttaa accgcggaag tcacgaatac gtggaacagc
    12121 gatagtaatc aatctttcaa agaattccca catacgttca ccacgtaggg ttactttgca
    12181 accgattgga tacccttgac ggattttaaa gcctgcaaca gatttgcgag ctttagttac
    12241 taaaggtttt tgaccgctga ttgctgctaa atccgctact gcgttatcta acagtttttt
    12301 gtcggtcaat gcttcaccca cacccatgtt aagggtaatc ttttcgattc gtgggacttg
    12361 catgacagat gagtagttga attttgcttt taattcatta actactgtat ctctgtagta
    12421 atcatgcagt ttcgccatca cattactcca gttaattaaa ttgttttctc gttagatttg
    12481 aagaaacgca cttttttgcc atcttcgaat ctaaatccta cacggtcagc tttgttggtt
    12541 tcagggttga agatcgcaac gtttgaaaca tcgattgcag cttctttctt cactaaacca
    12601 ccagctttgc ctaatgcagg aactggtttt tcgtgtttag tgatgatgtt gataccctca
    12661 acaaaaactt taccatttgg taacacttta gttaccttac cacgtttgcc cttatcttta
    12721 ccggtaagaa caattacttc atcgttttga cggatttttg cagccattac attctcctta
    12781 tagtacttct ggagctaaag agatgatttt cataaacttc tcagaacgaa gttcacgagt
    12841 caccggtcca aaaatacgag taccgattgg ttgctcagtg ttattgttta aaattacaca
    12901 agcattgcca tcgaaacgaa taactgcgcc atctgggcga cgaacaccct tcttggtgcg
    12961 cacaacaact gcttttaaca catcaccttt tttcacttta ccgcgtggaa ttgcttcttt
    13021 tacagtaact ttaatgatat cgccaatagc agcgtaacga cggtgcgatc cacctagaac
    13081 cttgatacac attacgctac gagcccctga gttatcagca acatccagca tagtctgttc
    13141 ttggatcata ttagtgctcc gttaaaataa aaaaacaccc tttcgggacg aacctattta
    13201 tacaaatata aatagggtgc aaaatatact acaaaaacca ctagttaatc aagtgaattt
    13261 ttaagctaat ttaatagttt aagtaagctt atttataaat tgtttcaact atcaataaac
    13321 tgtcctataa ctcatataaa aaccccaaga tatcttgggg tttaactaac attactctac
    13381 agtcaccgct tttgcaaggt tacgaggttg gtcaacgtcc gttcctttga ttaaggcaat
    13441 gtgatatgaa agtagttgta acggcacggt gtagaaaatc ggtgcggtta cttcatcaac
    13501 tttcggcatt acaatcgttt tgaagccttc tgcttcttca aaacctgcat cgtgatcggc
    13561 aaacacatat aactgaccgc ctcttgcacg cacttcttca atattggatt tcactttctc
    13621 aagcaagtca ttttccggtg ctaccaccac taccggcata tcgctatcaa ttaatgctaa
    13681 cgggccgtgt tttaactcgc ctgcggcata agcttctgcg tgaatatatg aaatctcttt
    13741 taatttcaat gcagattcca tcgcaaccgg gtaatattct ccacgaccta agaacaatgt
    13801 gtggtgttta tccgcaaaat cttccgataa tttttcgatt tgtttatcga acactaacgc
    13861 actttcaatt tgtgctggta agcgttgtaa agattgcacg atatggtgtt cttgctcttc
    13921 actcattctg ccttgtaagc gtccaatcgc cacatttaat aacaataagc aagttaattg
    13981 agtagtgaat gctttggttg atgctacacc aatttcaaca ccagctttgg ttaagaatgc
    14041 aaaatcggat tcacgcacta atgaagaact tgccacatta cacaccgtca ttgccgccat
    14101 atagccagat tctttcgcta aacgcagtgc agctaacgta tctgcggttt cacctgattg
    14161 tgaaagcgtg attaataagc tgttcgggcg agtaacgaat ttacggtaac ggaattcgga
    14221 ggcaatttcc acatcacagc tcacgcctgc aatggattca aaccaataac gtgaaaccat
    14281 accagcattg taagaggttc cacaagccac aatttgcacg tgttctactt tcgataaaat
    14341 ctctgccgca ttcggtgcaa tggctgaaat atctacttta ccgtctttga tacgaccatc
    14401 taaggtattc ataatcgcaa ccggctgctc aaaaatctct ttttgcatat agtgacgata
    14461 ttgtccttta tctgccgcgt ctgcctcaaa attgccttcg tgaatttcac gctctgcctt
    14521 gttgccttca cggtcataaa tatccactgt gcgacgggta atttcggcta catcaccttc
    14581 ttctagataa gcaaaacggc gagttacgct taataatgca agtgggtctg aagcaaggaa
    14641 gttctcgcct acaccgtaac caatcactaa cgggctacct gagcgagcca caattaaatg
    14701 ctccggctct tcttcattta ataccactgt gccgtaagca ccacgcagtt gcaccacggt
    14761 tttttgtacc gcttccaata atgaagaagc agaacgcaat tcccattcaa ctaaatgagc
    14821 aatgacttcg gtatcggttt gagattggaa cacataacca cgctcttgta acactatttt
    14881 taactcttcg tagttttcga taatcccgtt atgaactact gcaattttgc cactgcggtg
    14941 tgggtgagca ttagtttctg acggctcgcc gtgcgttgcc cagcgagtgt gtgcgatccc
    15001 agtgccgcct aatagtggct tagtgtctaa cgcctcatct aaggctttga ctttaccgac
    15061 acggcgtaca atttgcattg ttttatcatc tgcatttaat actgctacac cagcagagtc
    15121 atatccacgg tattctaagc gatgtaaacc atcaaccaag atttctgcga tatcacgttg
    15181 tgctactgca cctacaattc cacacataaa tttgctttcc tatgtttaag tttaaaaatt
    15241 catttgagct actgctattt tgcaataacc acttcgacac ccattttttc gatttgttct
    15301 ttcgtttcaa aacttaattg actgtcggta ataattttgg taatattttg ccatttcaat
    15361 tcaatattcg gcattttccg accgattttt tgcgattcaa ttaacacaat cacttcacgg
    15421 ctcacttctg ccatcacctg acttaagcca actaattcat taaaggtagt cgtgcctcga
    15481 gccaaatcta aaccgtccgc accaataaaa agctgatcga aatcatatga acgcaatacc
    15541 tgttctgcta ctttgccttg aaaggactca gaacggctat cccaagtgcc gccggtcatc
    15601 aacactgttg gttcgcattc gagggaagtc aattccgtcg ctaaattcag cgaatttgtc
    15661 atcaccacca agccggtttg gttcaatgct tttaccaaag ctccggtcgt gctgccgctg
    15721 tcaataatga tgcgattatg atcacgaata caatcacgtg cggcttgagc aatcattttc
    15781 ttttgaatcg aaagttgctc aataaacgct tcttccatca tttccgatgg aatttttacc
    15841 gccccaccat acttacgcaa taaaaaacca ctttcttcca aagcggttaa atcttttcta
    15901 atcgtaactt cagacgtctc aaagaaatga gcgagttcat ctacactcac ttcatttttc
    15961 tcttgtacca tttgaacaat taaatggcgg cgttgttgcg tgttacgttt tgacattata
    16021 atcttcactt aaatttcgtt tcaaaacttt tgcattataa agaaagctcg cgaaaagaaa
    16081 agcagaaaat gcaaaattta caaaatctat acaaaataaa accgcttgta atattgattt
    16141 acaagcggtt gatttcttga aattttttgc aattatttga tttggctacc aatcacgcca
    16201 ccaagtgcgg caccacctaa agttgcaccg gtagattcac caatcgcgtg accagccaca
    16261 ccgccaattg ctgcaccgat tgcagtatta cgttgcgttt ttgtcatatt gttacagcca
    16321 gacacagcaa ccattaatac cattgcacca acaactttca aaatagattt cataataatc
    16381 cctcataatt aatcaatttc aaataagcca atattcttgg ctatgctata agatttaatt
    16441 tatttagaaa ggttcaacta ctaccaccta tgaattgcaa attttttcac aatttaggcc
    16501 gcttgttgat tgaactgtga gcttgctcac agaattttat ggtatttctt gctatattgt
    16561 atagcaatct atgcgataac tcattaagga aataaaaatg aaattaaaaa aattatcttt
    16621 agcactctcg actttattac tcggttcagc ctttgccaac tctgctttag cggaaggtcg
    16681 tttaaccgtt tattgtagtg ccactaatga actttgtgag caagaagtgc aagcattcgg
    16741 caaaaaatat aatgttaaag tagcatttgt gcgtaatggt tcaggcagta cattggcgaa
    16801 aattgaagcg gagaaaaaca atcctcaagc tgatgtatgg tatggcggta ctttagatcc
    16861 acattcacaa gctgcagaaa tgggtttact cgagccgtat aaatcaccga atctcgaaca
    16921 aattatcgaa aaattccgtg atccggcaaa attaaaaggc aactactctt cggctgtgta
    16981 tatggggatt ttaggttatg gtgtgaattt agaccgaatc aaaaaactcg gcattgaaaa
    17041 agtgcctagc acttgggaag acttgctcga cccacgccta gccggtgaaa tccaaattgc
    17101 cgacccacaa agctccggca cggcttatac tgcgattgcg accttcgtac aacttttagg
    17161 agaagaaaaa gccttcgact atttccgcaa attacacaaa aacatttcac aatataccaa
    17221 atccggcatc acaccggcac gcaataccgc ccgtggtgaa accgctatcg gtatcggttt
    17281 cttacacgac tatgcgattg agaagaaaaa cggggctaac attgaaatga ccgcaccaac
    17341 agacggcaca ggctacgaat taggtggtgt gagtatcctc aaaggtgcaa gaaatcttga
    17401 taatgcaaaa ctgttcgtgg attggtcgct ttctaaagaa gctcaagaac tctcttggca
    17461 aaaaggcaat gcgttccaag tattaaccaa caccaccgca gaatcttccc cttatgctct
    17521 agatccgaaa aacttaaact taatcaacta tgatttcgag aaatacggct cgagcgaaga
    17581 gcgtaaacgc ttgattgata agtgggtaaa tgaagtaaaa ttagcgaaat agtgttaatc
    17641 tttccactga ggggataagc aattatcccc tctctaatta taagaatctg tgaggtgtta
    17701 tgcagaattt ttccttttcc cgaccgcttg tttgggtgct tatcgggtta ctcggttttc
    17761 tcttgttacc gtctaaagcc ttagattatg ggctgtttga ctcaacctct gatgaactgc
    17821 tcgccgcaat gggctgggcg agtctgaaca tcacttgggc gtggttttta ccgcttttgg
    17881 tatttttatt gccaaattcg accgcttgta aaactagagc caagctggaa ttagtagggc
    17941 tgggcgtgct gttcgccttt attttcctgt cagcgattgt gctgaaaatc agcctcggtt
    18001 atgcggtgtt gccgttgatt attgccatta tggggcttgc gaccccaaat ttagcaacgc
    18061 tcaaagtaat gcagggtgac cgctttatta tcggctcgtt actgagcatt attctgctga
    18121 ttttcttttt tattgtgtat ccgaccatcg ccatttttgt gtcgatgttc tacaacggct
    18181 cggaatttgt gccaagccaa gtgctgacaa ttttgcaaca accttatgtc gttcgagtca
    18241 tcggtaactc gctctcggtt gccggcacgg tgggcgttct ctccacccta ttcggcttag
    18301 cctttgctct ctacaccact cggattgcta aacgctcggc gtttatcggg cggattttct
    18361 cgattttacc tatcgtcacc ccgccgtttg tggtcggttt aggcgtaacc ctgatgcttg
    18421 ggcgttccgg ctatgttact gaatttttag tggattactt tggctttgcc aacaattggc
    18481 tgtacggttt caccggtatt gtgatagccc ataccctcgc gctcacgcca atgtcgttta
    18541 tgattttgga aggggcattg aaatccattc acccatcggt ggaagaagca gcttacaccc
    18601 tgcgttccaa ccgctatcaa gcctttttta acattatttt cccattgtta aaaccggcat
    18661 tggcaaactc ctttttagtg gtggcaattc aatccctcgc cgatttcagt acgccgttag
    18721 tattgggcgg tagctttgat gtgattgcaa cccaaatcta cttctacatt gccggttctc
    18781 aactggatta tgcctctgct agcacgcttg gggcaatttt gttggtgttc tccttagcca
    18841 ttttcgtgat ccaatacctc tggatcggca atcgctctta tgtgacggtg tccggcaaat
    18901 cctatcgggg tgatgtccaa gacttaccaa gcggtatgaa atggctgatt atttgcacct
    18961 tattgttctg gggaaccttc aacttagtgc tgtacggcag tattttctac ggcagtttca
    19021 ccgtgaactg gggtgtggat tataccttaa cccttgataa ctacatcaag ctattcgggc
    19081 aagggtttag cgatggcggt ttcccttcgt taattcaaac cgtgattttc gctgccgctg
    19141 ccgccccgat tactgcacta ttcggcttgc tgatcgccta tgtgacagtt cggcgtgatt
    19201 tcaaaggcaa gaaaaccctg gaatttttaa ccctgctctg ctttgccgta ccgggaacgg
    19261 tggcaggtgt ttcttacatt ctcgccttta acgatgcccc gatttaccta accggcaccg
    19321 gtatgatcat cattctctca atggtaatgc ggaatatgcc tgtgggtatg cgagcggcaa
    19381 ttgccggctt agggcagttg gataaatcgc tggacgaagc ctcgctctcg ctgaaagccg
    19441 gttcgttcaa aacgatgctg tttgtggtgt taccgctact caaaccggca ctgctctccg
    19501 ccctcgtcac cagctttgtg cgggcaatga cgactgtcag tgcgattgta ttcttagtca
    19561 ccgccgacac tcgtgtggca acctcctaca ttctcaaccg tgtggaagac ggtgaatacg
    19621 gcattgcgat tgcctacggc tcaattttaa ttgtggtgat gatggcgatt atcctgattt
    19681 ttgactggat tgtcggcgac acccgtatcg cccgttctaa ggcgaaaaaa atgtaaaaag
    19741 acatctactc tctcccttta tgggagagag acagaaaaat acttcgttca gaagtatttt
    19801 tcagagagag ggatataatt aaaaggacaa tatatgaaca acgatttctt agtattaaaa
    19861 aacgtcacca aatctttcgg caaggtgacg gtcattgata atctcaacct cagtattccg
    19921 caaggtaaaa tggtgacatt actcgggccg tccggctgtg gtaaaaccac cgtactgcgt
    19981 ttagtggcag ggctggaaaa cccgacttcg gggcaaattt ttattgatgg cgaagatgtt
    20041 acccaaagtt cgatccaaca ccgtgatatt tgcattgtgt tccaatctta tgcgttattt
    20101 ccgcatatgt cgattggcga taatgtcggc tacggcttga aaatgcaggg cgtaccgaaa
    20161 gaagaacggc tgcaacgagt gaaagaggcg ttggaattgg tggatttagg cggctttgaa
    20221 gatcgctttg tcgatcaaat ctctggcgga caacaacaac gtgtcgccct cgcccgtgcc
    20281 ttaattctga aaccgaaagt gctactgttc gatgaaccgc tgagtaacct tgacgctaac
    20341 ttacgccgtt caatgcggga gaaaatccgt gaattacagc aacgtttaaa cattacttcc
    20401 ctttatgtga ctcacgatca gtccgaagcc tttgcggttt cagatgaagt aattgtgatg
    20461 aacaagggaa aaattatgca aaaagctcca gccaaagagt tataccttcg ccctaattct
    20521 ttattcttag caaattttat gggtgaaagc agcatttttg aaggcacgat agctggcaac
    20581 caaattaata taaatggata tcaatttacg ttagcaaatg ctgaacaatt tgagttaccc
    20641 gatggggaat acttagttgg cattcgtcca gaagctattc atttagctga acaaggaaat
    20701 ataagtcaac tctgtaaaat taaaaatgca gtttatatgg gaaatcattg ggaaattata
    20761 gctgaatggg aagggaaaga tttattagtc aatactaaac ctgaaaattt ttaccctcat
    20821 atcaaacagg cctatgtaca ttttatcgaa caaggtgttt ttcttttaaa gaaagagcta
    20881 taacgaattt atactaaatt aagaggaagg tagttataac tatttagcaa ttttgagaaa
    20941 aataggccgc atgcaaaatc tcttgatgac aagcggtctt ttctcgccga
//
LOCUS       DANLZQ010000031        20848 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.031, whole genome shotgun sequence.
ACCESSION   DANLZQ010000031 DANLZQ010000000
VERSION     DANLZQ010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 20848)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20848)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20848
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.031"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            78..2009
                     /locus_tag="PXE50_001069"
     CDS             78..2009
                     /locus_tag="PXE50_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5621994.1"
                     /translation="MIFFTDLILKRGHSVLIDNSSVTIHTGQKVGLVGKNGCGKSSLF
                     ALLKNELQPEGGDVSLPKNWAISWVNQETPALAISALDYVIQGDREYTHLMAELDIAN
                     EKNDGNRIAIIHTQLDTIDAWTIQSRAATLLNGLGFSTEQLQLPVKSFSGGWRMRLNL
                     AQALICRSDLLLLDEPTNHLDLDAVIWLERWLSNYRGTLLLISHDRDFLDPIIDRVIH
                     IEHQKLNEYTGNYTSFEIQRATKIAQQNAAYQQQQRKVAHLQSFIDRFKAKATKAKQA
                     QSRIKALEKMELIAPAYADSPFEFEFRPPLALPSPLLMMEKVSAGYAEKTVLESVKLN
                     LVPGSRIGLLGRNGAGKSTLIKLLAGELPPQNGSIQLAKGVQLGYFAQHQVDTLRFDE
                     SPLWHLQKLAPEKTEQELRNYLGGFDFKGDKVVQAVKSFSGGEKARLVLALIVWQRPN
                     LLLLDEPTNHLDLEMRQALVDALTYYEGSLVVVSHDRHLLRSTVNEFYLVHDRKVEKF
                     KGDLDDYQKWLNEQNALANEPKSVLAKDSANSTACSSTNENSAAQRKEQKRLEAERRQ
                     QTAPLRKKITQLEKELEKATEKLNKLEAMLTESDIYEAENKAKLTETLAKQLEAKRLV
                     EEIEMQWLEAQEEFETMLR"
     gene            2288..2545
                     /locus_tag="PXE50_001070"
     CDS             2288..2545
                     /locus_tag="PXE50_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5621995.1"
                     /translation="MKNLRLSIHSSEHIWLRELFLKRRLELGLTQRTLGEKMGVLYSF
                     IGKVETGDRRLDIFEFIAYCKGLDLDPLSVLQEIEQQFPHK"
     gene            complement(2592..3212)
                     /locus_tag="PXE50_001071"
     CDS             complement(2592..3212)
                     /locus_tag="PXE50_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HDL5621996.1"
                     /translation="MKLWYSTTSPFARKALAVIKHHQLDDKVEMLRVTKAMDPNSPHN
                     QDNPLGRIPALQRNCGRWLFGSLLISEYLDQKGNNTPLLPKEGKPRWAVLALHNLADG
                     IMENTMPTLLQERMARPENEWWVSRHEQLMERNIRSFRQLEEALQEFGTELNLGTLTA
                     VALIDWWAFRLDKIGYDLAKNYPNLTAWAEEMNNKYAILAETKPSM"
     gene            complement(3214..3867)
                     /locus_tag="PXE50_001072"
     CDS             complement(3214..3867)
                     /locus_tag="PXE50_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01621 family pseudouridine synthase"
                     /protein_id="HDL5621997.1"
                     /translation="MTPTLPICYQHRDFIIINKPEGLSVHKDEAEIGLTELVARQLNV
                     KQVWLVHRLDKITSGLLILALNKEAAARFYHLFEQHKIYKTYWALSDKKPKKKQGRIV
                     GDMQKSRNGAWKLCHSKENPAVTQFISHSVEDSLRHFILQPKTGKTHQLRVAMKSLGS
                     PILGDKLYSGSQADRVYLHAYQLDFEYENEKISVQALPTSGHFWQKICKSNHIKHGE"
     gene            3916..4575
                     /locus_tag="PXE50_001073"
     CDS             3916..4575
                     /locus_tag="PXE50_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HDL5621998.1"
                     /translation="MAVTIYLVRHGRTVWNLEGRLQGSGDSALVEEGIIGAKKTGIAL
                     KHIPFTAAYSSMQKRAQDTANYILAENERSNIPHFHHKGLNEFDFGSWEGMKSVDLQE
                     NDEYWVMKRTPAEYLAKANGGERFEQLYQRVTQAFNQIAELHQNDGKVLIVSHGMTLT
                     LLTAVLKGIAWQDFRNEEKHSFVFNTAITKVEVENGKVTVLEFNNTDHLDNVPTSQYK
                     R"
     gene            complement(4612..5658)
                     /locus_tag="PXE50_001074"
     CDS             complement(4612..5658)
                     /locus_tag="PXE50_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01620 family protein"
                     /protein_id="HDL5621999.1"
                     /translation="MSKQIFNEEELKTTEHFEPKQEFDLENAIIEEEEKAVEAELIIE
                     ESLKPSRFWIRVLLATLALFGVAVIAQSIQWLIDTFQQREWIYFAFSIVFFIVSLLGV
                     GAIISEWRKLVYLRNHQKNQQMSNQLLLEQLPSNDGEQAVKFCENIANQLNHLPSIAQ
                     AEQLWKSELNEAYNAKEVLYLFSENVLKPIDKQVKQMISRNAAENAVIVAVSPLAIVD
                     VLLMAARNIALVNKITKAYGMELGYISRLKLFKMVLKNMVFAGATEIATDVGMDFFSQ
                     NLTAKLSLRAAQGIGVGLLTARLGIKAMEFCRPVAFQANEKPRISAIRQELLTSVKNT
                     VFAKTETKEKVFSD"
     gene            complement(5658..6611)
                     /gene="dusC"
                     /locus_tag="PXE50_001075"
     CDS             complement(5658..6611)
                     /gene="dusC"
                     /locus_tag="PXE50_001075"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(16) synthase DusC"
                     /protein_id="HDL5622000.1"
                     /translation="MNPIPNVILAPMQGVLDPFVRNLLTSVNDYDLCISEFVRVVDQR
                     LPKKTFYRLAPELYQGGLTDSGTPVRVQLLGQHPQWLAENAALAIELGSHGVDLNCGC
                     PSKTVNGSNGGASLLKDPELIYRATKAMREAVPSDKIVSVKVRLGWDSVSQCFEIADA
                     VEQGGANEITVHGRTKVDGYRAERINWQAIGEIQQRLSIPVIANGEIWDFESAKNCQK
                     ITACKALMMGRGALNTPNLSKVVKYNVPKMAWNEVLQLLFKYVQMENQFDTGFYHVAR
                     IKQWLRYLDKEYPQAVELFDILKTEHGYDGLKAHIEKAVEE"
     gene            complement(6689..7315)
                     /locus_tag="PXE50_001076"
     CDS             complement(6689..7315)
                     /locus_tag="PXE50_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2238 domain-containing protein"
                     /protein_id="HDL5622001.1"
                     /translation="MDSRSHIIPLFLAIVITVIAVWSGLNPTDRAVWYAEVIPIFIVF
                     ALLIITYPKFQFSGLAYFLMSLWLIMHLIGAKYTFANVPFEWANQFLTPILGEDRNHF
                     DRVAHYIIGFYSFPMAEWLLRKRKCGMGVAFFFSLFFIMSVAAAYEIIEWQYAVIEGG
                     NAGVEFLGSQGDIWDAQKDMLADTLGALTALMIYLIARPDLRIHDRHF"
     gene            complement(7315..8172)
                     /gene="djlA"
                     /locus_tag="PXE50_001077"
     CDS             complement(7315..8172)
                     /gene="djlA"
                     /locus_tag="PXE50_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone DjlA"
                     /protein_id="HDL5622002.1"
                     /translation="MQFIGKIVGFFLGYQLFHGLFGGILGAFIGHLADKKLYELGSVR
                     SSLFGKNLTRQSLFTQTTFAVLGHIAKAKGRVTEADIELARALMARLKLDSAAQQLAQ
                     NAFTLGKEPDFPLRQVIQEFREACGARTDLLRFFVEVQMQAALQDGQLDVNEQQILFT
                     IAETMGMSRFQFEQMIAMIMAAQQFRNGGYYQQNGSYHQQSQGGYQGSYQQPAQPSIE
                     AAYTVLGVTAQDDQNTVKRAYRKLMNEHHPDKLAAKGLPDEMMELAKEKAQQIQAAYD
                     LICKVKEWK"
     gene            complement(8220..8930)
                     /locus_tag="PXE50_001078"
     CDS             complement(8220..8930)
                     /locus_tag="PXE50_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL5622003.1"
                     /translation="MWKNRQLFFGYAENRLLLLSRSITGLLGILCGVYIIDHLVLSDV
                     DMIGKLTSFILIILSAIFLKERASLLQWILCLIAFIGALFIIKPAVDIRFMPYLVGVI
                     GSVFAAIAYLCLRLLAKTKKVESPNTIVFFFSAFSTLILLPFVAIDYVVLTNLQTIYL
                     VLAGVTSAVGQFCVTTAYKYAAAKDISIYSYASVLFSAILGLLFFEQYPDMLSWLGYA
                     IIFVSSWLMFVLTKKQSK"
     gene            complement(9166..9651)
                     /locus_tag="PXE50_001079"
     CDS             complement(9166..9651)
                     /locus_tag="PXE50_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HDL5622004.1"
                     /translation="MKKFAKVLMVAVPAFALAACSSSSDDAAANAAANAAANAAANAA
                     GEFGGLTAEQLKAQYNTVYFGFDSYAVEGEYRQLLDAHAQLLAKTQGNVTIAGHADER
                     GTPEYNIALGQRRADAVKGYLAAKGANNTSTVSYGEEKPAVLGHSEADYAKNRRAVLE
                     Y"
     gene            complement(9678..10964)
                     /gene="tolB"
                     /locus_tag="PXE50_001080"
     CDS             complement(9678..10964)
                     /gene="tolB"
                     /locus_tag="PXE50_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HDL5622005.1"
                     /translation="MKLFSRISGVIGIFSALLTTQVVADSDVRISIDEGVSMAQPIAV
                     VPFKASGVPADVAQIISDDLRNSGKFTPLERSQMPAQPGSAAEVVADQWSAIGIDNIV
                     VGQVSSTGGGYNVAYQLIDTLGTSGTAGGVIAQGSFIVPAAQIRQGAHTVSDEVFEKL
                     TQIRGAFRTKIAYVVQRGVSSYELRVSDYDGFNAFTITTSKEPLMSPEWSPDGSRLAY
                     VTFENKKAQVVVHDIRSGARRVVAALKGHNGAPSFSPDGSRIAFASNQDGELNIYVVG
                     SGGGTPSKLTANAGNNTEPSWSPDGSTIYFTSDRAGSPQVYRMSSSGGGASPMGGSGS
                     YNAKVSSDGKNLIMIAGDRVVKRDLASGGTEVLSSTFLDESPSISPNGIMVIYSSTKG
                     TSKVLQLVSADGRFKANLPGAGGHYKFPAWSPYLTK"
     gene            complement(10980..12203)
                     /gene="tolA"
                     /locus_tag="PXE50_001081"
     CDS             complement(10980..12203)
                     /gene="tolA"
                     /locus_tag="PXE50_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein TolA"
                     /protein_id="HDL5622006.1"
                     /translation="MKSQQDRLELAVIVSILLHILLIGLLLLGSLFTKTELAAAGGSG
                     GDSDSFEAVMVDTGQVAAEYGQLLAEKKGSKASKPKVEPKEEAVEEDVEDKPTPEEIQ
                     KQKQAELAAIQEKQRQQEIERQQKLQEQQKQEQAKQEELKKQQAEEATRKKAAEAAKL
                     KADAEAKRLEAAAKQAEEEKKAKEALEKKLEQQKKAEAEKKLKEQKELKEQQAKEAKE
                     AKEKAEKEAKAKAEKEAKEKAEKEAKAKAEKEAKEKAEKEAKAKAAAEAKAAQAKNNK
                     ALDDFLNSGDIGGGSSKGGNKNSAGSQGSGGTSGLGQGTNVDGNAYGQRIKKLIQSRY
                     RVDPSFAGKQCDVKIFLSRDGTITNYQVISGDKAVCDAAVSAIVATRKVPPAPSDAVY
                     NMFKSPTLDFSLKVK"
     gene            complement(12217..12654)
                     /gene="tolR"
                     /locus_tag="PXE50_001082"
     CDS             complement(12217..12654)
                     /gene="tolR"
                     /locus_tag="PXE50_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin uptake protein TolR"
                     /protein_id="HDL5622007.1"
                     /translation="MSRRLKRNDIKSEINIVPFLDVLLVLLLIFMATAPIISQSVEVN
                     LPEDTHSQSVSNEDKTPVILEVAGVGEYKLKIDGNYVQSNGQENINESEVVAYAGEQF
                     QKDNNTLFLVAGDKVVPYEEIMKGITLLKDAGVKSVGLMTEGK"
     gene            complement(12796..13476)
                     /gene="tolQ"
                     /locus_tag="PXE50_001083"
     CDS             complement(12796..13476)
                     /gene="tolQ"
                     /locus_tag="PXE50_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein TolQ"
                     /protein_id="HDL5622008.1"
                     /translation="MQTEFSLLSLFLEASIVVKIVMLILIVFSILSWAVIIQRSKILT
                     KAKKDSLAFEDRFWSGEDLNRLHQGLENRRDALNGSEQIFYVGFKEFTRLQQANPDAP
                     ESIIQGSTRAMNLALNREMESLENYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSAV
                     KQATLQSVAPGIAEALIATAIGLFAAIPAVMAYNRLNLRLGKVEQGYVNFIDEFTTLL
                     HRQAFSKR"
     gene            complement(13498..13899)
                     /gene="ybgC"
                     /locus_tag="PXE50_001084"
     CDS             complement(13498..13899)
                     /gene="ybgC"
                     /locus_tag="PXE50_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HDL5622009.1"
                     /translation="MDFPIRVYYEDTDAGGVVYHSNYLNFFERARTEFLRQQHFSQQE
                     LFSQSLAFVVKRIEIDYKLPARLDDLLNVETTLSELKKATLIFKQRLWKDGDCLSEAN
                     VTVACVDLIKMKPVAIPDDIRQALQKSYFSI"
     gene            complement(14062..14349)
                     /gene="ybgE"
                     /locus_tag="PXE50_001085"
     CDS             complement(14062..14349)
                     /gene="ybgE"
                     /locus_tag="PXE50_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyd operon protein YbgE"
                     /protein_id="HDL5622010.1"
                     /translation="MIHKLYNLTAKGLLKALSFILAAVLFATIWVNSTAFALSFGGKT
                     PYLAMLVFYGMAILWVHGIGFEIRAAIWKVIFLPLLGYLIVIPALWILLVK"
     gene            complement(14349..14447)
                     /locus_tag="PXE50_001086"
     CDS             complement(14349..14447)
                     /locus_tag="PXE50_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CydX/CbdX family cytochrome bd oxidase small
                     subunit"
                     /protein_id="HDL5622011.1"
                     /translation="MFYVTWVLGVLLAIFFATVITISIEKTGKFDE"
     gene            complement(14462..15595)
                     /gene="cydB"
                     /locus_tag="PXE50_001087"
     CDS             complement(14462..15595)
                     /gene="cydB"
                     /locus_tag="PXE50_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HDL5622012.1"
                     /translation="MIDYEILRFIWWILIAVLLIGFAITDGFDMGVLNLLPIIGKSNV
                     ERRIMINTIAPHWDGNQVWLLTAGGAIFAAWPTVYATSFSGFYIAMVLVLAALFFRPV
                     GFEYRAKIDNPKWRSAWDWGLFIGGFVPSLVFGVAFGNLLQGVPFEFNNINQSQYTGS
                     FFGLLNPFALVCGIISLMMLTTQGATWLQMKTTDELHNNSRKVAQVTASIVLVAFILA
                     GVWLYFKDGFVITSELDHNAQSLLTNKTVAVQAGAWFRNYAEMPVLWVVPALVVVGAL
                     LTIIASKANRSGLAFFSSSLMIVGVILTAAVSMFPFIMPSITHPEMSLTVWDATASHT
                     TLTVMLFVAGIFVPLVLAYTIWSYIKMYGRLDASYLEENKAAY"
     gene            complement(15608..17158)
                     /locus_tag="PXE50_001088"
     CDS             complement(15608..17158)
                     /locus_tag="PXE50_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HDL5622013.1"
                     /translation="MLDVVELSRLQFALTALYHFLFVPLTLGLSFVLVVMETLYVTTG
                     KEVYKDMTKFWGKLFGINFALGVTTGITMEFQFGMNWSYYSHYVGDIFGAPLAIEGLM
                     AFFLESTFVGLFFFGWERLSKAKHLLATYCVAFGSNFSALWILVANGWMQNPIASEFN
                     FETMRMELSSFSELVLNPVTQSKFLHTVTAGYVCGAIFVLGISSYYILKGRDLGFAKR
                     SFSVGASFGLIAIISVLIMGDESGYEIGKAQPTKLAAMEGEFETQPAPAAWNAFVIPN
                     TAEMKNEFSIHIPYAAGIIATRSLDKEIKGLKDIRVINEQRVRTGMVAYGLLEKLRSG
                     NYTEADKEAFKAVQKDLGFGLLLKQYTPNVVDATEEQIQKAADNTIPNVGPTFWAFRV
                     MMLSGFLMLILITTAFIQNMRGKVESSRFLLRGLLFGLPLPWIAIESGWFLAEYGRQP
                     WAIYEMLPVGVSNSALTTGDLWFTIGLLCGLYTLFLVVEMYLMFKYGRLGPSALKTGR
                     YYFEQSTK"
     gene            17574..17900
                     /locus_tag="PXE50_001089"
     CDS             17574..17900
                     /locus_tag="PXE50_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5339 domain-containing protein"
                     /protein_id="HDL5622014.1"
                     /translation="MLKRILGITLCTILVSSNAIASVKTSSLTVAKPTLSKNLPTECE
                     KMFNTANKLVSDAERQPGTHTQVLKMKNKLSLTKQQILKMDSELQQKSCEKGLTALNS
                     LKQKHQ"
     gene            complement(18025..19665)
                     /gene="groL"
                     /locus_tag="PXE50_001090"
     CDS             complement(18025..19665)
                     /gene="groL"
                     /locus_tag="PXE50_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608625.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HDL5622015.1"
                     /translation="MAAKDVKFGNDARVKMLKGVNILADAVKVTLGPKGRNVVLDRAY
                     GAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNE
                     GLKAVAAGMNPMDLKRGIDKAVAAVVEELKAISKPCETSKEIEQVGTISANSDSTVGQ
                     LIAQAMEKVGKEGVITVEDGTGLEDALDVVEGMQFDRGYLSPYFINKPEAGTVELENP
                     YILLVDKKVSNIRELLPVLEGVAKAGKPLLIIAEDIEGEALATLVVNTMRGIVKVAAV
                     KAPGFGDRRKAMLQDIAILTAGTVISEEIGMELEKATLEELGQAKRVVISKDNTTIID
                     GIGDETQIKGRVAQIRQQIEDSTSDYDKEKLQERVAKLAGGVAVIKVGAATEVAMKEK
                     KDRVDDALHATRAAVEEGIVPGGGVALVRAANKVADTLKGDNEEQNVGIKLALRAMEA
                     PLRQIVANAGEEASVVARNVKEGSGNYGYNAGTEQYGDMLEMGILDPTKVTRSALQFA
                     ASIAGLMITTECMITDLPKEEKLDPAAMGGMGGMGGMM"
     gene            complement(19734..20024)
                     /locus_tag="PXE50_001091"
     CDS             complement(19734..20024)
                     /locus_tag="PXE50_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000027827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HDL5622016.1"
                     /translation="MALRPLHDKVILKREEVETKSAGGIVLTGSAATKSTRGKVIAVG
                     TGRILDNGSVQPLAVKVGDVVIFNEGYGVKTEKIDGEEVLILAEHDILAIVE"
     gene            20258..>20848
                     /locus_tag="PXE50_001092"
     CDS             20258..>20848
                     /locus_tag="PXE50_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622017.1"
                     /translation="MKKYLMLCSLWFLSACFNESYDFRGKEFEEPVQAILVESDKIYF
                     IGSTIDAIFDKTLIDNTKASDVIYFLNKLLQSPYGRKISNHLITLAIYDENIQIQYSP
                     QFIAKNLTMSDIQALQKLGFQFSHSKEYLWKSYAGLGGKITQFKNRKEILEKYKFKQP
                     IIAKAKSYQKSIEFSFDDTISVIAAPITIPASIILFV"
BASE COUNT         6386 a         4547 c         3703 g         6212 t
ORIGIN      
        1 attttagttc acaaagcaat ggctttgctt ttttatgcta aaatacgcaa aatttttaac
       61 aaaatagacc gcttgcaatg atctttttta cagacttaat tttaaaacga gggcattccg
      121 ttctcattga taacagctcc gttaccattc acaccgggca gaaagtcggt ttggtgggaa
      181 aaaacggctg tggcaaatcc tctctttttg ccttactgaa aaatgaatta caacctgaag
      241 gtggcgatgt atcgttgccg aaaaactggg cgatctcgtg ggtaaatcaa gaaacgcctg
      301 cgttagctat ttcagcgtta gactatgtga ttcaaggaga tcgggaatat acccatctta
      361 tggctgagct agatatcgca aatgaaaaga atgacggcaa ccgcattgcg attatccata
      421 ctcaacttga taccattgat gcttggacaa ttcaatcccg tgccgctacc ctgcttaacg
      481 gcttggggtt tagcaccgaa caactgcaac tgccggtgaa atccttctcc ggtggctggc
      541 gtatgcggtt aaatttggca caagctctga tttgtcgttc cgatctgtta ttgcttgacg
      601 agccaaccaa ccacttagac ttagatgcgg ttatttggtt ggagcgttgg ctgagtaact
      661 atcgtggcac tttattgtta atttcgcacg accgtgattt tctcgatccg attatcgatc
      721 gggtgattca tattgaacat caaaagctca atgaatacac cggcaattac acctcgtttg
      781 agattcaacg tgcgaccaaa atcgcccagc agaatgccgc ttatcagcaa cagcaacgta
      841 aagttgctca tttgcagagt tttatcgatc gctttaaagc caaagcgact aaagcgaaac
      901 aggcacaaag ccgaattaaa gcgttggaaa aaatggagct tattgcccca gcctatgctg
      961 attcgccgtt tgaatttgaa tttcgcccac cgcttgcact gcctagcccg ttattaatga
     1021 tggaaaaagt cagtgccggc tatgcggaaa aaacggtgtt ggaatcggtc aaactgaatt
     1081 tggttcccgg ctctcgtatt ggtttactcg ggagaaacgg tgcagggaaa tccacgctga
     1141 ttaaattatt ggcgggcgaa cttccgcccc aaaacggctc aattcaactg gcaaaaggcg
     1201 tgcaactcgg ctatttcgcc caacatcagg tggatacact acgttttgat gaaagcccac
     1261 tttggcattt acaaaaactc gcaccggaaa aaaccgagca ggaattacgc aattatttag
     1321 gcggtttcga ttttaaaggc gataaagtgg tacaagctgt gaaatcattc tccggcggag
     1381 aaaaggcccg tttagtgctt gccttaattg tatggcaacg cccgaattta ctgctattag
     1441 atgagccaac caaccattta gatttagaaa tgcgacaagc cctggttgat gcactgacct
     1501 attacgaagg ctcgctagtg gtggtttcgc acgaccgcca tttattgcgt agcaccgtga
     1561 atgaatttta tttagtgcac gaccgcaaag tggaaaaatt taaaggtgat ttagacgatt
     1621 accaaaaatg gctcaatgag caaaacgcct tagccaacga gccgaaatcc gtacttgcaa
     1681 aagattcggc aaattcgacc gcttgctcta gcaccaatga aaatagtgca gctcaacgca
     1741 aagagcaaaa acgcttagag gcagagcgcc gccaacaaac cgccccattg cggaaaaaaa
     1801 ttactcaact ggaaaaagag ttagaaaaag caaccgaaaa attaaataaa ctcgaagcaa
     1861 tgcttaccga aagcgacatt tatgaagccg aaaataaagc aaaactaact gaaacacttg
     1921 cgaaacagtt agaggcaaaa aggctggttg aagaaattga aatgcaatgg ttggaggctc
     1981 aggaggagtt tgagaccatg ttacgctagg gttctacaag atagcgcaag cgtccacgct
     2041 tgtgccattt aagggaacta tacacctcaa aaaaacaatg atcattaagc tagctttttt
     2101 ataaatttaa aaacctatag attaaataaa taatgatatt aatagtaaaa tcacgagtgc
     2161 aactacactg acgataataa aatcaggcat acttattctc cctataaaat gtggtaatgt
     2221 aactacaaat taattatata atgaacctaa aaaaggttca acattatttg tacctaatat
     2281 aggtgcaatg aaaaatctta gattatcaat acattccagc gagcatattt ggttaagaga
     2341 actattctta aaacgccgtt tggaactagg gctaacacaa cgcacattag gagaaaaaat
     2401 gggcgttctt tactcattta tcggaaaagt agaaacagga gatcgcagat tagatatttt
     2461 tgaatttatc gcttattgca aagggttaga tttagatcct ttatctgtat tgcaagaaat
     2521 tgaacaacaa tttcctcata aataaaggca ttgagttata actcaatgcc tttattttct
     2581 atgtcaaatc tctacatgct cggcttagtc tctgccagaa tggcgtattt attattcatt
     2641 tcctctgccc aagcggttaa atttgggtaa ttttttgcaa gatcgtagcc tatcttatct
     2701 aagcggaatg cccaccagtc aattaatgct actgcggtta atgtgcctaa attcagctct
     2761 gtgccaaact cttgcaatgc ctcttctaat tgtctgaacg aacggatatt gcgttccatt
     2821 aattgctcgt ggcggctgac ccaccattca ttctcggggc gagccatacg ttcttgtaat
     2881 aaagttggca tcgtattttc cataatgccg tccgccaaat tatgtaatgc caacactgcc
     2941 cagcgaggtt taccctcttt aggtaacagt ggagtgttat tgcctttttg gtcaagatat
     3001 tcgctaatta acaaactacc gaaaagccaa cgtccgcagt tgcgttgtag ggcaggaata
     3061 cgtcctaacg ggttatcttg attatgtggc gaatttggat ccattgcttt tgtcacccgc
     3121 aacatttcga ctttatcgtc taattggtgg tgtttaatca ccgcaagggc tttgcgggcg
     3181 aaagggctgg tggttgagta ccaaagtttc atactattct ccgtgtttga tgtgattgga
     3241 tttgcaaatt ttttgccaaa aatgaccgct tgtcggcaag gcttgcactg agattttctc
     3301 attttcgtat tcaaaatcaa gctgataagc gtgcaaataa acacggtcgg cttggctacc
     3361 tgaatagagt ttatcaccta aaatcgggct gcccaaactt ttcattgcca ctcttaattg
     3421 gtgagttttg cctgttttgg gttgcaaaat aaaatgcctg agcgagtctt caacagaatg
     3481 agaaataaat tgcgttactg ccgggttttc cttactgtgg cataatttcc acgctccatt
     3541 tctgcttttt tgcatatcgc caacaattct accctgcttt ttcttcggct ttttatcgct
     3601 taatgcccaa taggttttgt agattttatg ctgttcaaat aaatggtaaa accttgctgc
     3661 cgcctcttta ttcaacgcta aaatcagtaa acctgaggtg attttatcca gacggtgaac
     3721 cagccaaacc tgctttacat tcagttggcg agccactaat tccgttaagc cgatttcagc
     3781 ctcatcttta tgcacactca agccttccgg cttattgata ataataaaat cacgatgttg
     3841 ataacaaata ggcaatgttg gggtcatttt gctataatcc ttccaatttt tgactatttt
     3901 agcaaggaaa ttacaatggc tgttaccatt tatttagtac gacacggcag aaccgtgtgg
     3961 aatttggaag gcagattaca aggctcgggc gattccgctt tagtagaaga agggattatc
     4021 ggagcgaaga aaaccggcat tgcgttaaaa catattccgt ttaccgccgc ctattccagt
     4081 atgcagaaac gggctcaaga taccgcaaac tacattttag cagaaaatga acgcagtaat
     4141 attccgcatt ttcatcataa aggcttgaat gaatttgatt ttggcagctg ggaaggaatg
     4201 aaatctgtcg atttgcaaga aaatgatgaa tattgggtga tgaaacgtac accggcagaa
     4261 tatctggcaa aagcaaacgg tggcgagcga tttgagcaac tttatcaacg ggtgactcag
     4321 gcgttcaatc aaatcgccga gctacaccaa aatgacggca aagtgctgat tgtttcacat
     4381 ggtatgacct taaccttact cacggctgtg ttaaaaggca ttgcgtggca agatttccgc
     4441 aatgaagaaa aacatagctt tgtgttcaat actgccatta cgaaagtaga agtagagaat
     4501 ggcaaagtaa cggtgctgga atttaataat accgaccatt tggataatgt gccaacaagc
     4561 caatacaaac gataatatta agggcggaac attgtccgcc catagcattt tctaatcaga
     4621 gaacactttt tctttcgttt ctgttttagc aaataccgta tttttgaccg aagtaagcaa
     4681 ctcctgacga atagctgaaa ttcttggctt ctcattcgct tgaaaagcaa caggacgaca
     4741 aaattccatt gctttaatgc caaggcgagc agtgagtaaa cccacaccaa taccttgtgc
     4801 ggcacggagc gataatttcg ccgtaaggtt ttgcgagaag aaatccattc caacatcagt
     4861 agcgatttcg gttgcaccgg cgaacaccat atttttcagc accattttga acagttttaa
     4921 gcggctgata taacccaatt ccattccata ggctttggta attttattca ctaaagcgat
     4981 atttcttgcc gccattaaca acacatcaac tattgccagc gggctaaccg ccacaatcac
     5041 cgcattttct gccgcattgc gggaaatcat ctgcttaacc tgtttatcta tcggctttag
     5101 cacattttcg ctaaacagat atagtacctc tttggcatta taagcctcgt tcagttcgct
     5161 tttccaaagt tgctcggctt gagcaatgct cggcaagtga ttaagctgat ttgcaatatt
     5221 ttcgcaaaat ttgaccgctt gttcgccatc attggaaggc agctgttcca gcaataattg
     5281 gttactcatt tgttgatttt tctgatgatt tcgcaaatac accaactttc gccattcgga
     5341 aataatcgcc ccaacgccca acaagctgac aataaaaaag actatcgaga acgcaaaata
     5401 gatccactct ctttgctgga acgtatcaat caaccactga atactttgag caattaccgc
     5461 cacgccaaac aaggcaagtg tggcaagtag tactcgaatc caaaagcggg aaggcttaag
     5521 gctttcttca ataatcagct ccgcctcaac tgctttttcc tcttcttcaa taatcgcatt
     5581 ttcgagatca aactcttgtt taggttcaaa atgctcggtt gtttttagct cttcttcatt
     5641 aaaaatttgc ttactcatta ttcctccact gccttttcaa tatgtgcttt tagaccatca
     5701 tagccgtgtt cggttttcaa gatatcaaat aattctaccg cttgaggata ttctttatcc
     5761 aaataacgta gccattgttt gatgcgagca acgtggtaaa aaccggtatc aaactgattt
     5821 tccatctgaa cgtacttaaa caatagctgt agcacttcat tccacgccat tttcggaaca
     5881 ttatatttca ccactttgct taaattcggt gtgtttaacg ccccacgccc catcattaat
     5941 gccttgcaag cggttatttt ttggcaattt ttcgccgatt caaaatccca aatttcgccg
     6001 ttggcgataa caggaataga cagccgttgt tgaatttcgc caatcgcctg ccaattaatt
     6061 ctttctgctc gataaccatc aactttggtt cgcccgtgaa cggtaatttc attcgctccg
     6121 ccctgttcta ccgcatcggc aatttcaaaa cattggctaa cggaatccca acctaatcgc
     6181 acttttacgg aaacgatttt atcgcttggc acagcttcac gcatcgcttt ggttgcacga
     6241 taaatcagtt ccggatcttt taataacgaa gccccaccat tgctgccatt taccgtttta
     6301 gaggggcagc cacagttgag atctaccccg tgtgaaccaa gctcaatggc aagagctgca
     6361 ttttctgcca gccactgtgg gtgttgccct aaaagctgta cccgcactgg tgtgccggaa
     6421 tcggttaatc cgccttgata tagctcaggg gctaggcgat aaaaggtttt cttcggtaaa
     6481 cgttgatcga ccactcgcac aaattcggaa atacagagat cgtagtcatt cactgaagtt
     6541 aaaaggttgc ggacaaaagg gtctaaaacc ccttgcatcg gggcaagaat aacgttagga
     6601 attggattca ttggtaaaat aaaaaataca agcggttatt ttttctcaac attttgcaaa
     6661 aaattggcaa gaaacaaccg cttgaaggtt aaaaatgtct atcgtgaatg cgcaaatcgg
     6721 ggcgagcgat caggtaaatc atcagtgcgg ttaatgcccc aagagtatcc gcaagcatat
     6781 ctttttgagc gtcccaaata tccccttgcg agcctagaaa ttccacgccg gcattgccac
     6841 cttcaatcac ggcatattgc cattcaataa tttcgtaagc tgccgccacc gacataatga
     6901 aaaacagcga gaagaaaaat gctacgccca ttccgcactt gcgtttacgc agtaaccatt
     6961 ctgccatcgg gaagctgtaa aaaccgataa tgtaatgtgc tactcgatca aaatggttac
     7021 gatcttcacc taaaatcggg gttagaaatt gatttgccca ctcaaacggc acattggcaa
     7081 aggtatattt tgccccgatc aagtgcataa tcagccaaag cgacatcaaa aaataagcta
     7141 acccactaaa ctgaaattta gggtaagtga taattaaaag ggcaaaaacg ataaaaatcg
     7201 gtatcacttc cgcataccaa actgcgcggt ctgtcggatt taaccctgac caaaccgcaa
     7261 tcacggtaat aacaatcgct aaaaatagag ggatgatatg cgagcgtgaa tccattattt
     7321 ccactctttc actttacaaa ttaaatcgta cgccgcttga atttgttgag ctttctcttt
     7381 tgccaactcc atcatctcat caggcaaacc tttagcggct aatttatccg ggtgatgttc
     7441 gttcattaac ttacgataag cccgtttcac tgtattttga tcgtcttgtg cggttacgcc
     7501 taatacggta taggctgcct caatgcttgg ttgtgcaggc tgctgataac tgccctgata
     7561 gccaccttga gattgctgat gataactccc attttgctga taatagccac cattgcggaa
     7621 ttgttgagct gccataatca ttgcgatcat ctgctcaaat tggaagcgag acattcccat
     7681 tgtttcggca atcgtaaaca gaatttgttg ctcgttcaca tcaagttgcc catcttgcaa
     7741 ggctgcctgc atttgcactt cgacaaagaa acgtaataag tcagttcttg ccccacaggc
     7801 ttctctgaac tcttgaatga cttggcgtaa cgggaagtca ggctctttac ctaaggtaaa
     7861 ggcattttgc gctaattgct gggctgcact atctaatttt aagcgagcca ttaacgctcg
     7921 ggctaattca atatccgctt cagtaacacg cccttttgct ttcgcaatat gccccaacac
     7981 cgcaaaagtg gtttgggtga aaagcgattg gcgagttaaa tttttaccga aaagacttga
     8041 acgaactgaa cctaattcat agagtttttt atcggctaaa tgcccgataa aagcgccaag
     8101 tatcccacca aataaaccgt gaaaaagctg atagcccaag aaaaaaccga ctatttttcc
     8161 gataaattgc atttttttat ccttttatag aaatgaataa acgttattct aacaaaattt
     8221 tactttgatt gctttttagt taatacaaac ataagccagc ttgagacaaa aataattgca
     8281 taacctagcc aactcaacat atccgggtat tgttcaaaga acaacaaccc taaaattgca
     8341 ctaaatagca cagaggcata actataaatt gagatgtctt tcgccgccgc atatttatag
     8401 gcggtagtta cacaaaactg cccgaccgct gaagttaccc ctgctaacac taagtagatt
     8461 gtctgtaaat tggttagcac tacataatca atggcgacaa aaggcaataa tatcaaggtc
     8521 gaaaaggcag aaaaaaagaa aacaatggta ttaggtgatt ctactttttt ggtttttgcc
     8581 aataacctta agcataaata ggcaatggct gcaaacacag agccaatcac gccaaccaga
     8641 taaggcataa agcgaatatc aactgccggt ttgataataa aaagtgcccc gataaaggca
     8701 ataaggcata aaatccattg caggagagat gctctctctt ttaaaaaaat cgcagaaaga
     8761 ataattaaaa tgaacgacgt gagtttgcca atcatatcga catcacttag cacaaggtga
     8821 tcgatgatat atacaccaca taaaatcccc aataacccgg tgatggaacg gcttaataat
     8881 aacaaacgat tttctgcata accaaagaat aattggcgat ttttccacac aatataaccg
     8941 cttatcaatg ctgtgcgttg cgaaaaatcg ctttttgtgc aatcggtaca tcccccgaaa
     9001 gacgaagaaa agcagccata atcgcaaagc ttagtgccga caaaagcaca caaaaaatgg
     9061 ctttaaataa cggcgagagc gaattccaaa aattcatagc ataaaggctt ttaataaaaa
     9121 taaagccctg attattcagg gcttcaattt agaatcaact aagaattagt attctaatac
     9181 tgcacgacgg tttttcgcgt agtcagcttc tgagtgacct aatactgctg gtttctcttc
     9241 accgtaagaa acagttgaag tgttgttagc acctttagct gctaagtaac ctttaactgc
     9301 atctgcgcga cgttgaccta atgcgatgtt gtactctgga gtaccacgct catcagcgtg
     9361 accagcaata gttacgttac cttgagtttt tgctaataat tgagcgtgag cgtctaataa
     9421 ttgacggtat tcaccttcaa ctgcatagct gtcaaaaccg aagtatacag tgttgtattg
     9481 tgcttttaat tgttcagctg ttaaaccacc gaattcgcct gctgcatttg ctgctgcatt
     9541 tgctgctgcg tttgctgctg cgtttgctgc tgcatcatct gatgagctgc tacatgctgc
     9601 taatgcgaaa gctggtactg ctaccattaa tactttagca aattttttca tttgttgctc
     9661 ctaatagaga aatattatta tttagttaag tatggtgacc atgcagggaa tttataatgt
     9721 ccacctgcgc caggcaaatt agctttaaaa cgcccatctg cagacaccaa ttgtagcact
     9781 ttactcgtac ctttggtaga gctataaata accataatgc cattcggtga aatacttgga
     9841 ctttcgtcta agaaagttga actcagtact tctgtgccac ctgaagcgag atcgcgtttc
     9901 acaactctat caccggcaat catgattaaa ttcttaccat cagatgatac tttcgcatta
     9961 tagctaccgc taccgcccat tgggctagca ccaccacctg atgaactcat tctataaact
    10021 tgaggagaac ctgcacggtc agacgtaaag tagattgtgc taccatctgg agaccagctt
    10081 ggttcagtat tatttccagc attagcggtc aatttacttg gtgtaccacc gccactacct
    10141 acaacataaa tatttaactc accatcttga tttgaggcaa acgcaatgcg agaaccgtct
    10201 ggagagaatg atggcgcacc attatgtcct ttcaatgctg ccactacacg gcgagcacct
    10261 gaacgaatat cgtgaacaac aacctgcgct tttttatttt caaatgtcac ataagctaat
    10321 ctgctaccat ctggtgacca ctctggcgac attaaaggct ctttactggt tgtaatagta
    10381 aaggcattaa aaccatcata atcagatact cgtaattcat acgatgatac gccacgttga
    10441 accacatacg caattttagt tctaaatgca ccgcgaattt gggttaattt ttcaaatacc
    10501 tcatcactta ctgtatgcgc accttgacga atttgggctg ccggaacaat aaatgaacct
    10561 tgggcaatga caccacccgc tgtacccgat gtaccaagag tatcaattaa ttgataagcg
    10621 acattataac cgccacctgt gctactcact tggccaacta caatattatc aataccgata
    10681 gcactccatt gatctgccac cacttccgct gctgatcccg gttgagcagg catttgagag
    10741 cgttcaagcg gtgtaaattt accactattt cgcaaatcat cagaaataat ttgtgcaaca
    10801 tctgccggca caccgctggc tttaaatggc acaaccgcaa tcggctgagc catacttaca
    10861 ccttcatcaa tagaaattcg cacatcagaa tcagcaacca cctgagttgt caataatgct
    10921 gaaaagatgc ctattacacc cgatatacga gagaataatt tcatttgtag tcctctaaat
    10981 tatttaactt ttaaactaaa atcaagtgtt ggtgatttaa acatattata taccgcatct
    11041 gatggtgcag gtggtacttt tctagttgcc actattgcac ttaccgctgc atcacatact
    11101 gctttatcgc cactgataac ttgatagtta gtaattgtgc catctcgact taagaatatc
    11161 ttaacatcac attgttttcc ggcaaaactt ggatcaaccc gatatcgaga ttgaattaat
    11221 ttcttaattc gttgaccata tgcattacca tctacattag taccttgccc taagccactt
    11281 gtaccaccag aaccttgtga tcctgctgag tttttgttac cacctttact tgaaccacca
    11341 ccgatgtctc cactattgag gaaatcatca agtgctttat tgtttttcgc ttgggcggct
    11401 tttgcctcag cagctgcctt cgctttagct tctttctcgg ctttctcttt ggcttctttt
    11461 tctgcttttg ctttggcttc tttctcagcc ttttcttttg cttctttttc tgccttggct
    11521 ttagcttctt tttctgcttt ttccttcgct tctttagctt cttttgcctg ctgttccttc
    11581 agttcttttt gctcttttaa ctttttctca gcttccgctt tcttctgctg ttcaagcttc
    11641 ttttcaagtg cttctttagc ttttttctct tcttcagctt gtttagcagc agcctctaaa
    11701 cgcttagctt ctgcatctgc tttcagtttt gctgcttcag ctgctttttt acgagttgct
    11761 tcttctgctt gctgcttttt aagctcttct tgcttagctt gttcttgctt ttgctgttct
    11821 tgtagttttt gctgacgctc aatttcttgc tgacgctgtt tctcttgaat cgccgctaac
    11881 tcagcttgtt tctgtttttg gatctcttcc ggagtcggtt tatcttccac atcttcttca
    11941 acagcttcct ctttaggctc tacctttggc ttcgatgctt ttgagccttt tttctctgcc
    12001 aataactgcc catattcagc agccacttgc ccagtatcta ccatcacagc ttcaaagcta
    12061 tcgctatcgc caccactgcc accagccgca gcgagttccg tcttagtgaa aagagacccg
    12121 agcaataaca acccgattaa caatatatgc aataagatcg aaacaataac cgctagctct
    12181 agtctatctt gttgagattt cacacgttat ccttggctat ttaccttctg tcattaaacc
    12241 taccgatttc actccggcgt ctttaagtag tgtaatacct ttcataattt cttcataagg
    12301 tactacttta tcaccggcaa ctaaaaataa ggtattgtta tctttttgaa attgttcccc
    12361 tgcataggca acaacttctg attcattaat attctcttgc ccattacttt gcacatagtt
    12421 accgtcaatt ttcaatttat attcaccaac acctgccacc tccaaaatca ctggagtttt
    12481 atcttcatta gaaactgatt ggctatgcgt atcttccggt aaattaactt ctacactttg
    12541 actgataatt ggggccgttg ccataaaaat cagcaataat accaacaata catcaagaaa
    12601 tggaacaatg ttgatttctg atttaatgtc attacgtttt aaacgacgag acatatattc
    12661 ctctttacag gtgcttagca ccttaattga tctgaaataa ccggcacagt gtcccggtct
    12721 cgaataatgc ggttacaagc ggtctttttt acgaaaaact ttacaaattt tcattaaaaa
    12781 tcaaccgctt gtagattatc tttttgaaaa agcctgacgg tgtaataagg tcgtgaactc
    12841 atcaatgaaa ttcacatacc cttgctcaac tttacctaaa cgtaaattca aacggttata
    12901 tgccattact gcaggaatcg ccgcaaataa accgatagcc gttgcaatta atgcttctgc
    12961 aatacccggt gcgactgatt gtaaagttgc ttgcttaact gcacttaatc ccataaagga
    13021 gtgcataatt ccccaaaccg ttccgaataa accaatatat gggctgattg aacccactgt
    13081 gcctaaaaac ggaatgtagt tttctaaact ttccatttca cggtttaatg ctaagttcat
    13141 cgcacgggta gaaccttgaa taatcgattc tggcgcatct gggttcgctt gttgtaaacg
    13201 ggtaaattct ttaaacccaa cataaaagat ttgctctgaa ccatttaatg catcacgacg
    13261 attctctaaa ccttggtgta aacggtttag atcttcccct gaccagaatc gatcttcaaa
    13321 agcaagggaa tcttttttgg ctttagttaa aattttgctg cgctgaataa tcaccgccca
    13381 agacaaaatt gagaatacaa taaggatcag catcacgatc tttaccacaa tacttgcttc
    13441 taaaaataac gaaagaagac taaattcagt ttgcattaat aaaactccga atagttttta
    13501 aatagaaaaa taactttttt gtaatgcttg acgaatatca tcaggaattg caaccggctt
    13561 cattttgatt aaatcaacac aagcgaccgt aacatttgcc tcactcagac aatcgccatc
    13621 tttccacaat cgttgtttaa agataagggt tgctttcttc aattctgaga gtgttgtttc
    13681 cacatttaat aaatcatcta aacgagcagg gagcttataa tctatttcaa tcctcttaac
    13741 aacaaaagca agggattggc taaaaagttc ctgctgtgag aaatgctgct gtctcaaaaa
    13801 ttccgttctt gcccgctcaa aaaaattcag atagttggaa tgataaacta ctccgccggc
    13861 atcagtatct tcataataaa cacgaatcgg gaaatccata agcattattt ctctcattca
    13921 aaatgaaaaa acgcccaaaa tttaggcgca aattgtgaga tattttagga tcagaaatat
    13981 tgttatgcaa gtatattttt tggtaaattg caaaaatatt ttttatctat caaaaataaa
    14041 aatagagaca taaaaatgcc tctatttaac aagtaaaatc cataatgccg gaataacaat
    14101 aaggtaacct agaagtggta aaaaaatcac tttccaaata gcagctcgga tttcaaatcc
    14161 aattccatgt acccataaaa tagccatacc ataaaatacc aacattgcta aatacggcgt
    14221 ttttccacca aaagaaagag cgaaagcggt cgaatttacc caaatagttg caaataatac
    14281 agccgctaaa ataaaagaaa gggcttttaa caagcccttt gctgttaagt tatagagttt
    14341 atgaatcatt actcgtcaaa cttacctgtt ttttcaatgc tgatcgtgat gactgttgca
    14401 aagaagattg caagcaatac acctaagacc caagttacat aaaacatatt gtgtctcctt
    14461 attagtaagc tgctttattt tcttctaaat aactagcatc taaacgacca tacattttga
    14521 tatatgacca aatagtatat gctaatacta acggtacaaa gataccagca acaaataaca
    14581 ttacagttaa tgttgtgtgg ctagcagtag cgtcccaaac cgttaagctc atttctggat
    14641 gagtaattga cggcataatg aatgggaaca ttgatactgc agcagttaaa atcaccccaa
    14701 caatcatcaa tgatgatgag aagaatgcta aacctgaacg atttgctttt gaggcaataa
    14761 tagtcagtaa tgcacctact acaactaatg caggaacaac ccataataca ggcatttcag
    14821 cataatttct aaaccatgca ccagcttgaa ccgctacagt tttattcgtc aatagagatt
    14881 gtgcattatg atctaactcg cttgtgatca caaaaccatc tttaaaatat aaccatacac
    14941 ctgcaagaat aaatgccact aatacaatag aagctgtcac ttgtgccact tttcttgagt
    15001 tgttatgtag ctcatcagta gttttcattt gtaaccaagt tgcaccctgt gtggttaaca
    15061 tcattaagct gataataccg cacactaatg caaatggatt taataaacca aagaatgaac
    15121 ccgtatattg tgattggtta atattattaa attcaaatgg tacaccttgt aataagttac
    15181 cgaatgcaac accgaatact aatgatggaa cgaaaccacc aataaataat ccccaatccc
    15241 aagcactacg ccatttcgga ttatcaattt ttgcacgata ctcaaaacct acagggcgga
    15301 aaaataatgc tgcaagcaca agcaccattg caatatagaa acccgagaac gaagttgcat
    15361 agactgttgg ccatgcagcg aagatcgcac caccagcggt caataaccat acttggttac
    15421 catcccagtg aggggcaatt gtgttgatca taatacgacg ttcaacatta cttttaccaa
    15481 tgataggtaa aaggtttaat acgcccatat caaaaccatc agtaattgca aagccaatta
    15541 acaataccgc aattaagatc caccaaataa agcggagaat ttcataatcg atcatttcta
    15601 actcctatta tttagttgat tgttcaaaat aataacggcc tgtttttaat gcactagggc
    15661 caagacgacc atatttgaac attaaataca tttctacaac taagaatagt gtatataaac
    15721 cacacaataa gccgattgta aaccataaat cacctgttgt taatgcagag tttgacacac
    15781 cgacaggtaa catttcatag atagcccaag gctgacggcc atattcggca aggaaccaac
    15841 cagattcaat cgcaatccaa ggtaacggaa gaccgaataa caagcctctt aataagaaac
    15901 ggctactttc tactttacca cgcatatttt gaataaatgc tgtcgtaatc aagataagca
    15961 tcaagaagcc agataacatc attacacgga atgcccagaa tgtagggcct acatttggaa
    16021 ttgtattatc tgctgctttt tgaatttgtt cttcagtcgc atcaaccaca ttaggtgtat
    16081 attgttttaa caataaccca aagcctaaat ctttttgtac agctttaaat gcttctttat
    16141 ccgcctctgt ataattgcca gaacgtaatt tttctaatag tccgtaggct accataccgg
    16201 tacgaacacg ttgttcatta attacacgaa tatcttttag gcctttaatt tctttatcta
    16261 aagaacgggt tgcaataata ccagctgcat aaggaatatg aattgagaat tcatttttca
    16321 tttccgcagt atttggaatc acaaaagcat tccaagcagc tggagcaggc tgagtttcga
    16381 attcaccttc cattgcagct aatttagtcg gctgagcttt accgatttca taaccagatt
    16441 catcacccat aatcagtaca gagatgatcg caattaaacc aaaacttgca cctactgaga
    16501 atgaacgttt tgcaaagcct aagtcacgac cttttaagat atagtatgaa ctaataccta
    16561 atacaaaaat agcaccacaa acatagcctg cggttacagt atgtaagaat ttagattgtg
    16621 taactgggtt taatacaagt tcagagaaac ttgaaagctc cattcgcatg gtttcaaagt
    16681 tgaattcaga agcaatcggg ttttgcatcc aaccattagc aactaaaatc catagtgcag
    16741 agaagttaga accaaacgca acacagtaag ttgctaataa atgtttcgct ttcgataaac
    16801 gttcccagcc aaagaagaac aagcccacaa aggtagattc taagaagaac gccattaaac
    16861 cttcaatcgc taatggagcg ccaaaaatat cacctacata atgagaataa tatgaccagt
    16921 tcataccaaa ctggaattcc attgtaatac cagttgttac ccctagggca aagttaatac
    16981 caaataattt accccagaat ttagtcatat ctttatatac ttctttaccc gtagttacat
    17041 acagggtttc catcaccaca aggacgaaag aaagacctaa tgtaagcggt acgaataaga
    17101 agtgatagag tgcagttaga gcaaactgca aacgtgagag ttcaactaca tctaacatct
    17161 caaacctctt atattaatat actaatttga caattagatt actgtaaaag taatcaccca
    17221 caaattcact caattctaat aaataaccca aattggttaa ttttataata aagtgtcgac
    17281 gagtattcta cctgtaaata gctaattaaa aaatagtaat tttgttatat tcgtcacaaa
    17341 attggtttat ttatgtaata attgctattt aacatactaa ataacacggt tatacttaac
    17401 aaataagtaa caatttattt actatttttt atactaacga tcttgaaaat ttattcttgg
    17461 caaaaagatc ttagttttag atgactttaa attaaagttc tgataacatc agcaagcttt
    17521 attaaataac atattagatt tttactttta aacacttaat gtgtggagaa cgcatgctaa
    17581 aaagaatttt aggaataaca ctttgtacca tattggtttc cagtaatgct atagcaagtg
    17641 ttaaaacctc atcacttaca gttgcaaaac ctactttaag taaaaatttg ccaactgaat
    17701 gtgagaaaat gtttaacacg gcaaataaat tggtctctga tgcagaaaga cagcctggta
    17761 ctcatactca agtgctaaaa atgaaaaata aactttcttt aacaaagcaa caaatcctaa
    17821 aaatggattc tgaattacag caaaaaagtt gtgagaaagg tttaacagca ctaaacagcc
    17881 ttaaacaaaa acatcaataa acgctaaaac caagcttact tgcttggttt tttatttgca
    17941 aaaaatagca taaatttaac cacttgttac caacaaaaaa gctactgaat taatttcagt
    18001 agcttttgtt cactcaatgg gcaattacat cattccgccc attcccccca taccgcccat
    18061 tgcggcagga tctaatttct cttcttttgg cagatcggta atcatacatt ctgtagtgat
    18121 cattaaacct gcaatagaag ccgcgaattg aagtgctgaa cgagtcactt tagttgggtc
    18181 taaaattccc atttcaagca tatcgccgta ctgctctgta cctgcgttat agccgtagtt
    18241 gcctgaacct tctttcacgt tgcgggctac aactgaggct tcttcacctg cattggcaac
    18301 gatttggcgt aatggagcct ccattgcacg caaggcaagt ttgataccta cattttgctc
    18361 ttcgttatcg ccttttagtg tatcagccac tttgttggct gcacgcacta aagcaactcc
    18421 gccccccggt acaatacctt cttccaccgc agcacgggtt gcgtgaagag catcatcaac
    18481 acggtctttt ttctctttca tagccacttc agttgccgca cctactttaa ttaccgcaac
    18541 accaccggct aattttgcta cacgctcttg tagtttttct ttgtcgtaat ctgaagttga
    18601 atcttcgatt tgttggcgga tttgtgctac acgacctttg atttgagttt catcaccaat
    18661 accgtcaata attgtggtgt tatctttgct gataaccaca cgttttgctt gaccaagctc
    18721 ttcaagggtt gctttttcaa gctccatacc gatctcttca gaaatcacag tacctgcagt
    18781 taagatcgca atatcttgta acattgcttt acggcgatca ccaaagccag gtgctttcac
    18841 tgccgccact ttcacgatac cacgcatagt gttcaccact aaggtagcta acgcctcgcc
    18901 ttcaatatct tcggcaataa ttaataacgg tttacctgct tttgcaacac cttctaacac
    18961 cggtaataat tcacgaatgt tagacacttt tttatccact aaaagaatat atgggttttc
    19021 taactcaacc gtaccggctt ccggtttatt gataaagtat ggcgataagt aaccacggtc
    19081 aaattgcata ccctcaacca cgtctaatgc atcttctaaa cctgtaccgt cttcaacagt
    19141 aatcacgccc tctttgccca ctttttccat tgcttgagca attaattgac cgactgttga
    19201 atctgagttt gcagaaatcg tccctacttg ctcaatttct tttgaggttt cgcacggttt
    19261 tgaaatcgct tttaactctt caaccactgc tgcaaccgct ttatcgatac cacgttttaa
    19321 atccattggg ttcatacccg cagccactgc ttttaagccc tcgtttacaa tcgcttgagc
    19381 taatacagtt gcggtagttg taccgtcacc ggcggcatca ttggctttag aggcaacctc
    19441 tttcaccatt tgagccccca tattttcaaa tttatcttct aattcgattt cacgggcaac
    19501 cgacacaccg tcttttgtaa tcgttggtgc accataagca cgatctaaca ccacattacg
    19561 acctttcgga cctaaagtta cttttaccgc atcggctaaa atattcacgc cttttaacat
    19621 ttttacgcgt gcatcgttac caaatttcac gtcttttgct gccattttct aaatcctttg
    19681 tatttgaaat atgtaaaaaa ttttgctttt ttaaccgctt gtgcagaacg aaattattct
    19741 acaatcgcca aaatatcgtg ctctgctaaa attagcactt cttcgccgtc aattttctcg
    19801 gtttttacgc cgtagccttc gttaaaaatc actacatcgc ccactttaac tgctaaaggc
    19861 tgaacagaac cattgtctaa aatgcgacct gttcctactg caattacttt gccacgggtt
    19921 gattttgttg ctgccgaacc ggttaaaaca ataccgcctg ccgattttgt ttcaacttct
    19981 tcacgtttta aaataacttt atcgtgtaat ggacgaagtg ccataatatg ttccttttct
    20041 taaaaatgaa taaataaaac ttcacgcaaa atgcgtaacg cctaacaata taaaggcaga
    20101 ttttagagtt tcaagtgcaa gcggtcaaat ttgtaaaatt ttttacaaat ttgaccattt
    20161 ttgataaaac tatataccta agaaatctgt ttctgtttag aaaaacccca attctcttat
    20221 accatttaaa ctattaattt caagatagga taataaaatg aaaaaatact taatgctctg
    20281 ctcactatgg tttctctccg catgctttaa cgaaagttat gattttagag gaaaagaatt
    20341 tgaagaacct gtacaagcaa ttttggttga atcagataaa atttatttca ttggttccac
    20401 aattgatgcg atatttgata aaacgctgat agataataca aaagcttcag atgttattta
    20461 ttttttgaat aaacttcttc aaagtccgta tggaaggaag atcagtaatc acctaattac
    20521 tttagccatt tatgatgaaa atattcaaat tcagtacagt ccgcaattta ttgcaaaaaa
    20581 tctcaccatg agcgatattc aagctctaca aaagttaggt tttcaattta gccattcaaa
    20641 agaatatcta tggaaaagct atgcaggtct tggtggtaaa atcacacagt ttaaaaatcg
    20701 caaggaaata ctagaaaagt ataaatttaa gcaacctata atcgctaaag cgaaaagtta
    20761 tcagaaaagc atagaattta gctttgatga caccatttcg gtcattgcag caccaattac
    20821 gattcccgca tctattattt tatttgta
//
LOCUS       DANLZQ010000032        20004 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.032, whole genome shotgun sequence.
ACCESSION   DANLZQ010000032 DANLZQ010000000
VERSION     DANLZQ010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 20004)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20004)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20004
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.032"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            137..385
                     /gene="rpsP"
                     /locus_tag="PXE50_001093"
     CDS             137..385
                     /gene="rpsP"
                     /locus_tag="PXE50_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HDL5622018.1"
                     /translation="MVTIRLTRGGAKKRPFYQIVVVDSRSPRDGRFIERIGFFNPLAA
                     GQAERLRLDVAKVDAWVAKGADLSDRVASLVKEARKAA"
     gene            418..945
                     /gene="rimM"
                     /locus_tag="PXE50_001094"
     CDS             418..945
                     /gene="rimM"
                     /locus_tag="PXE50_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005626427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HDL5622019.1"
                     /translation="MSEQKIEVVGKLGSTYGIRGWLRLYSSTEQTESIFDYQPWFLKI
                     KGQWQQVELESWRYHSNDLIVKLKGTEDREAAQLLTNAEIGVDLSVFPELEEGDYYWH
                     DLIGCSVVNLEGYTMGTVAEMMETGSNDVLVVRNNGKDAFGKQERLIPFLYEQVVKRV
                     DLATKTITVEWDAGF"
     gene            990..1745
                     /gene="trmD"
                     /locus_tag="PXE50_001095"
     CDS             990..1745
                     /gene="trmD"
                     /locus_tag="PXE50_001095"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HDL5622020.1"
                     /translation="MWIGIISLFPEMFKAITDFGVTGRAVKQNLLQVECWNPRDFTFD
                     KHKTVDDRPYGGGPGMLMMVQPLRDAIHAAKKAALAVEGGEAKVIYLSPQGRKLDQNG
                     VQTLASNQKLILICGRYEGVDERLIQTEVDEEWSIGDYVLTGGELPAMTLIDAVARFV
                     PGVLGKQASALEDSFAEGLLDCPHYTRPEVLDGMPVPEVLMSGHHEQIRKWRLEQSLE
                     RTWLRRPELLDSLALTDEQRVLLAKIKKQHKIS"
     gene            1772..2122
                     /gene="rplS"
                     /locus_tag="PXE50_001096"
     CDS             1772..2122
                     /gene="rplS"
                     /locus_tag="PXE50_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HDL5622021.1"
                     /translation="MSNIIKQLEQEQLKQDLPSFRPGDTLEVKVWVVEGSKKRLQAFE
                     GVVIAIRNRGLHSAFTLRKVSNGVGVERVFQTHSPVIDSISVKRKGAVRKAKLYYLRE
                     RSGKSARIKERLGD"
     gene            2278..2634
                     /locus_tag="PXE50_001097"
     CDS             2278..2634
                     /locus_tag="PXE50_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622022.1"
                     /translation="MKQLSIRLPDDEFTFIKTFASAHKLTLQNFVMSAIQAKVAEMSA
                     KNKISEESNIHQPLSKDEKIMLNEAKVFYSARSHLKAENVILPSDFMEQIKSGCGAEK
                     MAEMMGYTKEDWESMK"
     gene            2636..2959
                     /locus_tag="PXE50_001098"
     CDS             2636..2959
                     /locus_tag="PXE50_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622023.1"
                     /translation="MGQITFSNIFTKVIFENVLSASTKEKIKQMLFQSVVALPPLHSE
                     RKMILQLKKQKITIFYQVIEEQSVQILAYQFGGTDKLTGVSKAHFKTLDAIFQMTDEE
                     KEGKF"
     gene            complement(2969..3301)
                     /locus_tag="PXE50_001099"
     CDS             complement(2969..3301)
                     /locus_tag="PXE50_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MazG-like family protein"
                     /protein_id="HDL5622024.1"
                     /translation="MQIEQYQQWVRQFYQQQGWYERSPFMRVTYLAEEIGEVACAVRA
                     IEIGRERPDETEASQQQKRDNLIEELGDVMDNLFVLADKYGISMTEVLERHQAKFEKR
                     YLQKNMEK"
     gene            complement(3394..4590)
                     /locus_tag="PXE50_001100"
     CDS             complement(3394..4590)
                     /locus_tag="PXE50_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HDL5622025.1"
                     /translation="MNIPFCLPENISPETFLREYWQKRPLLIRNGLPQIVGLFEPEDI
                     LELALEEEVTARLIQCENEKWSVKSSPLVEEDLEELPVQWSVMVQNLEQWSPELGELW
                     QAFGFIPQWQRDDIMVSCSPLNGTVGKHYDEYDVFLVQGYGQRRWQLGKWCDPSTEFK
                     PNQPIRIFDDMGELVMDEVMNPGDVLYVPSRMAHYGVSESEQGLTFSFGLRYPNATDL
                     LENLCKTIEQQADNINSSEFHLPFRLTPNEQPNALLDPKMVKMFKHQLIDLLQNSEQF
                     DELLTHSVATAASSRRYELLQTDNEYYPDEVQEILEAGGWLQQDANVKILYTENPQRV
                     YVNGEWIDELNEAEMALLIRIANGDSISWNKLASKVQDQAELELMLDTICDWLDSGWI
                     ILSEAE"
     gene            complement(4739..6082)
                     /gene="accC"
                     /locus_tag="PXE50_001101"
     CDS             complement(4739..6082)
                     /gene="accC"
                     /locus_tag="PXE50_001101"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015431873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HDL5622026.1"
                     /translation="MLEKVVIANRGEIALRILRACKELGIKTVAVHSTADRELKHVKL
                     ADETICIGPAPSVKSYLNIPMIIAAAEVTNADAIHPGYGFLSENANFAEQVEKSGFIF
                     IGPTADVIRLMGDKVSAINAMKKAGVPCVPGSDGPVGNDPKKNKEIAKRIGYPVIIKA
                     SGGGGGRGMRVVHHEKDLEESIAMTKAEAKAAFNNDMVYMEKYLENPRHIEIQVLADT
                     HGNAVYLAERDCSMQRRHQKVVEEAPAQGITPELRQFIGERCANACREIGYRGAGTFE
                     FLYENGEFYFIEMNTRLQVEHPVTEMITGVDLVKEQLRVAAGLPLSITQDDIKVKGHA
                     IECRINAEDPNTFLPSPGKITRLHVPGGLGVRWDSHIYSGYSVPPHYDSMIGKLITFA
                     ENRDIAIRRMENALSETIVEGIKTNIPLHTQILADKEFRKGGTNIHYLEKKLGLK"
     gene            complement(6154..6621)
                     /locus_tag="PXE50_001102"
     CDS             complement(6154..6621)
                     /locus_tag="PXE50_001102"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HDL5622027.1"
                     /translation="MDIRKIKKLIELVEESGITELEVSEEEGTVRISRAAPAVAPAAV
                     QYAAAPVVAPAAPQVASTVPVAAPAEAPKAAETSGHAVLSPMVGTFYRSPSPDAKPFV
                     EVGQTVKIGDTLCIVEAMKMMNRVESDKAGVVKEILVNDGEPVEFDQKLFIIE"
     gene            complement(6874..7656)
                     /locus_tag="PXE50_001103"
     CDS             complement(6874..7656)
                     /locus_tag="PXE50_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
                     /protein_id="HDL5622028.1"
                     /translation="MAVKNEQFIVICNGVFRLFGNIVKILSYPFHALFPKKRFTIPEY
                     SPAKIQSSIPSKITKTIWQTNYSNKVTLPMYANYLFNRLMSLSYDYRYVSTEEREAYI
                     KANADERTFNAYSKLTDGAAQADFWRIFTLLREGGIYIDIDGHLVYPLSKIIGENDSE
                     VLIKRRDKYTNFFLASEAGNWILKDTLELIISNIENRRIEGGVFVMTGPDTLNNAIGD
                     KEVNFRRDKVTCAQGTFTNEYFQYIDKPGSKWNYKKNEDLLK"
     gene            complement(7666..8103)
                     /gene="aroQ"
                     /locus_tag="PXE50_001104"
     CDS             complement(7666..8103)
                     /gene="aroQ"
                     /locus_tag="PXE50_001104"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HDL5622029.1"
                     /translation="MKKILLLNGPNLNMLGKREPQIYGSQTLADIENHLKKLAAAQDV
                     ELESFQANGEEPIINRIHQAFQHTDFIIINPGAFTHTSVAIRDALLSVSIPFVEVHLS
                     NVHSREPFRHHSYLSDIAKGVICGLGAKGYEYALDFAISHLKA"
     gene            complement(8189..8557)
                     /locus_tag="PXE50_001105"
     CDS             complement(8189..8557)
                     /locus_tag="PXE50_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDL5622030.1"
                     /translation="MAFTIRKMVEQDTHQVFPLMQKLAVFEHYIDSFAITPEVVMESG
                     FRKSPPDFYCLVAENASNIIGILVYYFLPYTAQNRPAIYMKELYVDETARNQKVGEAL
                     MQALKNEAKAHHCKTIKSLE"
     gene            complement(8617..9441)
                     /gene="dapD"
                     /locus_tag="PXE50_001106"
     CDS             complement(8617..9441)
                     /gene="dapD"
                     /locus_tag="PXE50_001106"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HDL5622031.1"
                     /translation="MSLQAIIEAAFERRAEITPKTVDAETKAAVEEVIAGLDNGSLRV
                     AEKKDGEWVVNQWVKKAVLLSFRIADNEIIDGAETKFYDKVPTKYGNYTEEQFKADGI
                     RAVPGAVVRKGSHIEKNVVLMPSFVNIGAYVGEGTMVDTWVTVGSCAQIGKNVHLSGG
                     VGIGGVLEPLQANPTIIGDNCFIGARSEIVEGVIVEDNCVISMGVFIGQSTKIYDRET
                     GEVHYGRVPAGSVVVSGSLPSKDGSHNLYCAVIVKKVDEKTLSKVGLNDLLRSIDE"
     gene            9589..10251
                     /locus_tag="PXE50_001107"
     CDS             9589..10251
                     /locus_tag="PXE50_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HDL5622032.1"
                     /translation="MENFANLLTGKTREHLVPLPNALSDKHYLQPQVVEAFLTLQHAA
                     KQAGFNLQPASTFRDFERQKGIWNAKFRGERKVHDDNGVAIDMAALSDLEKCKAMLRW
                     SAVPGASRHHWGTEIDIFDPDLLPENTPLLLEPWEYLEGGYFADLTKWLHVNAETFGF
                     YFPFDGKHSRVGFEPWHISYRPISNEYEQRFNDEILKAAWQDEEVAGKECLLEHFEEL
                     LK"
     gene            10248..11000
                     /locus_tag="PXE50_001108"
     CDS             10248..11000
                     /locus_tag="PXE50_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDL5622033.1"
                     /translation="MIQLINETQQHDKFRQICDKWQLVEDKSSPLALVLTEERLELRK
                     LDEPKLGAIAVNFVDGTMAHRRKFGGGRGEAVAKAVGIKGDYLPTVIDATAGLGRDAF
                     VLAAVGCKVLLVERNPIVAALLEDGLNRAYQDVEIGSFMQERMILADVRDISQLDPQS
                     QMAEVVYLDPMYPHKQKSALVKKEMRVFQHLVGADLDSDSFFLPAKGLAKKRVVVKRP
                     DYAPFLAEQKPDFSHTTKNHRFDVYLSHLKND"
     gene            11091..11927
                     /gene="ftsN"
                     /locus_tag="PXE50_001109"
     CDS             11091..11927
                     /gene="ftsN"
                     /locus_tag="PXE50_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HDL5622034.1"
                     /translation="MPQRDYVARSNEKKSKKNQKESNVKKILMRIIGVILFFGIGLWF
                     LKSSAPVPTVPSAPQPANSQTKSELPSRPEETWSYIRDLETRTVITDNSQTSQERLAQ
                     LTAEQKQQIEERRKQEEARLAAEQAQQKPATDVSATELAPKTEEVKSLTEEELAAKKA
                     QEQALAQKQAEEKRRQAELKKQQEAKKEQPAKIVASAATLADKAANQAGKFGLQCGAF
                     KNKAQAENMQARLAMAGFNARIASSADWNRVFVGPIGDRAATSRAQSNARSVAECVIV
                     AM"
     gene            complement(11969..13150)
                     /locus_tag="PXE50_001110"
     CDS             complement(11969..13150)
                     /locus_tag="PXE50_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HDL5622035.1"
                     /translation="MKTELDMIVIGGGMIGAATALGLAKQGLRLALLEKNPLPTFNPD
                     SDYDLRISAISMGSIQLLEKLGVWEQIVAMRSTPYTQLETWEIDGFNTLFSAADLGLE
                     KLGDMVENNVIQIALWEQLKQYPNCLQAVGFEQIFANKAGEYWEVTVDGNTFAAPLLI
                     AADGANSQVRQWAGIGLTAWQYRQHCLLATVTTEKPAPSGTWQQFYPTGPRAFLPLSG
                     NHGCVVWYDSPQKIAELKMLPAEKLGVAIEQHFPSRLNAELGNIQVQASGAFPLTRQH
                     AQHYVQNGVVLVGDAAHTINPLAGQGVNLGFKDVKTLLEVIEQAVKKGKNFASEQVLQ
                     RYEQKRKPDNLLMQTGMDVFYKAFKTDLLPLKIARNVGLVLADKVSPIKKQALKYAIG
                     I"
     gene            13257..13595
                     /locus_tag="PXE50_001111"
     CDS             13257..13595
                     /locus_tag="PXE50_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622036.1"
                     /translation="MSCKTHANHEHEHGEGCGHTAIKHNDHIDYLHDGHLHHNKHGDH
                     YDEHVLEVNETNPADCNAAHCCGDHVHGEVCGHEAVPHGDHIDYIVNGRLHHQHGDHC
                     DDHGPVEIVK"
     gene            13727..14596
                     /locus_tag="PXE50_001112"
     CDS             13727..14596
                     /locus_tag="PXE50_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HDL5622037.1"
                     /translation="MTLAIVYSRASIGVEAPLVTIEVHISNGQPKLTIVGLPEATVKE
                     AGDRVRSALLNANFIYPPQRITINLAPADLPKEGGRFDLPIAIGILAASGQIDSDLLT
                     QFEFLGELALTGHLRGVHGTIPAVISADKAKRQMILAKQNANEASLVSNATTYFAGSL
                     LEVVNMLNKRDKLPICQHISQHSAEIRPLVSRDLTDIIGQQHAKRALMIAAAGQHNLL
                     FLGPPGTGKTMLASRLADLLPEMTDEEAIETASVTSLVQNELNFQNWKQRPFRSPHHS
                     ASMVALVGGGCEN"
     gene            14688..16499
                     /locus_tag="PXE50_001113"
     CDS             14688..16499
                     /locus_tag="PXE50_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622038.1"
                     /translation="MFYLNNDNFKREPYRGYCPSHLEKLFTKPHLDIRGNGYYYPDNE
                     YVVAWYESDFIFKSRKAQAHAKVKLVNLTCPKYTGKNSAEYLSVLYISVPLNYLHYFT
                     IGSIWKGGVAKEQFALEEFYITVEAENQDGKRENLSIVSFGESEENGLEKPFDYTIYT
                     IPTEYHNYGDDLNRLLSISYQNQKFIIHPLHIFMMHYGYSTDIKRILATYPLDEVRER
                     LFIDKVVENFDVERYVVLPKYFVKKDAIFLYHFKYDEETTGTRVKKLVSQFRLNIHNQ
                     THPIEIDFWHTQKVELKIRGVRLGNAVLCAEIIGLNQPEGEDITLVLSQSKREKSGNK
                     TEEQNNEVNNVPITRVYTREPELDELPLTDNSPDNRTVEYNKRQFELLGRQRQIRALK
                     KAREESNQKMKALTPDEIDSLGVGESDGRNGKVGLAFCFLDDTPVGKSSKLYKLWQHA
                     KAVAEWNHGEAHWYTPNLGFRNDDELLPVSLETNKCFDYPEIAIIIRLQIYGETFFLI
                     DFSMKQRDISIRGLGYKPDPNEDFLYESDMSKSELSELLSAVHHHEHLPKEYIEKKNK
                     EKTKLTTFNHSEAESSNWAYNAVQKLTSRAITKPTYF"
     gene            16508..19288
                     /locus_tag="PXE50_001114"
     CDS             16508..19288
                     /locus_tag="PXE50_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HDL5622039.1"
                     /translation="MNAEQRVIVTPTFWGKFFGKIKSVELQQNKVIVTDKKNNITEHD
                     LGKTFDFPAIQKSFFGTKLFFKDDSTEVVLSKLAKKQTDSLLLEIEKVVASNIKVKVK
                     EGFQHFANLAENQYLRDSDIPTLNDRVRLSVLSYGDNKEHFQKYFDESLVKKIQYISS
                     LFPVNAINAQTIRREYEQHVLNHRKHFFDVIESNPLTEQQRLSVIRNNDINMVLAAAG
                     TGKTSVMVAKALDLIDSGACKSEDILILAYNRDAATELSERLQERAREANLDLENSPS
                     ISTFHALGRRIIKECGKSVHLSKFAEDPMKLDRWFNKWLEDYIKEDPDNLAKFIQLAY
                     QPIDPFQFKTKDEYDRYVNDNDYRTLQGERVRGYQELLIANWLFSHSVEYEYEPRYVS
                     KRRIEIGFDYKPDFSLGDGVYLEHFGIDRQGRTRADINAQEYNANIQRKRELHAEHNT
                     TLLETYHYNWVENTLYKRLEQLMNEQFIPLKPKSQQEILDALNESGIFKENKNRYLKC
                     LQAIRTERLDYQQILKRLTDAKIVYAKEYATLLMRIHDAYVKELRSANEIDFDDMILL
                     ATQLVKTGEFKPKWKHILVDEFQDISMARLELLKEIYTKGPRPIWTVVGDDWQSIYRF
                     SGGKLEVTTRFNDMVGSHTLSKLEKTYRYNNSIADTAGQFIMQNPEQYQKNVVTHTKV
                     ADSCVHLYDSHVVKDEKSEANISLKASAILKLIRQKAPEATVAILARYRYLLEDAKSV
                     IKDKNVKFWTFHGSKGLEADYCILLGFFQGKVGFPNQNKEEAVVEALLPMLDSFPHSE
                     ERRLFYVALTRAKKESYLIADANAPSEFINELLSPKYKIDIVSKRFQERYRTIFKCNE
                     CSTGYFVMKQGKFGQFYSCTSGEVCRSSPRICEKCGRPMKLREGKFGQFWGCSGYGIK
                     GDQCTNTRKYFM"
     gene            19310..>20004
                     /locus_tag="PXE50_001115"
     CDS             19310..>20004
                     /locus_tag="PXE50_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine methyltransferase"
                     /protein_id="HDL5622040.1"
                     /translation="MDLFESKKQLIELIKKYDSDKEIYSSSSYNESQLRTDFLDPFFG
                     LLGWDITNSKNKLTSEREVIVEEPLKEKVSENVKKPDYTFRFNSQRKFFVEAKKPSVK
                     IKTDPLPAHQVRRYGFTAKLSISVLSNFEYLAIYDCSEIVDVQQDALYARVRLYHYTE
                     YVKFFDEIMNLLGRESVYSGHFDNEWREISQKIENSKQTVDELFFEQINKWRHVLGSE
                     LLKINPCISNNEL"
BASE COUNT         6060 a         4009 c         4234 g         5701 t
ORIGIN      
        1 atatcaatga atctcccttg tctttccgca aaaaatctgt ataatttgac cgcttgtttt
       61 ctcttttgaa acaagttcgt taccctcacc tcgaacgagg gtttattttt tactatcaac
      121 atttagagga aaggttatgg taaccattcg tttaactcgt ggcggagcta aaaaacgccc
      181 attttaccaa atcgtggtag tggacagccg ttcacctcgt gatggtcgct ttatcgagcg
      241 tatcggtttc ttcaacccat tagcagcagg tcaagctgag cgtttacgct tagatgtggc
      301 taaagtagat gcttgggttg ctaaaggtgc tgatttatca gaccgtgttg cttctttagt
      361 aaaagaagct cgcaaagcag cttaattttt aagccaaaat taaataagta ggtgagtatg
      421 agcgaacaaa agatcgaagt tgtcggaaaa ttaggttcaa cctatggtat ccgtggttgg
      481 ttgcgtctct attcatcgac agaacaaact gagagcattt tcgactacca gccgtggttt
      541 ttaaaaatta aaggtcagtg gcagcaggtc gaattagaaa gctggcgtta tcatagcaat
      601 gatttgattg ttaaattgaa aggcactgaa gaccgtgaag ccgcacagtt attaaccaac
      661 gctgaaattg gcgtggattt gtctgtgttt cctgaattgg aagagggaga ttactattgg
      721 cacgatttga tcggctgttc ggtagtaaac ttagagggct acacaatggg aacagttgcc
      781 gaaatgatgg aaacaggttc aaatgatgtg cttgtggtgc gtaataacgg caaagatgct
      841 ttcggtaaac aagaacgatt aattccgttt ttgtatgaac aagtagttaa aagagtagat
      901 ctcgccacca aaaccattac ggtggagtgg gacgctggtt tctaacctca ggtatgcggt
      961 gagctttgga aaacatttaa ggcgttaaaa tgtggattgg tattatttca ctgtttcctg
     1021 aaatgtttaa agcaattacc gatttcgggg tgacaggacg tgcagttaaa caaaatctac
     1081 tgcaagttga atgttggaat cctcgtgatt ttacattcga taaacataaa actgtagatg
     1141 atcgccctta tggcggtggt ccgggaatgt tgatgatggt gcaacctttg cgtgatgcga
     1201 ttcacgcagc gaaaaaggcg gcattagcag tagaaggcgg tgaagctaaa gtgatttatc
     1261 tttcgccgca aggacgtaaa ctcgatcaaa acggtgtgca aacactggct tcaaatcaga
     1321 aactgatttt aatttgtgga cgatatgaag gcgtggacga gcgattgatt caaacagaag
     1381 ttgatgaaga atggtcaatc ggtgattacg ttctcacagg gggggaatta cctgcaatga
     1441 cattaattga tgcagttgca aggtttgttc ccggggtatt aggcaaacag gcttccgcgt
     1501 tagaggattc tttcgcagag ggattattag attgcccaca ttatacccgc cctgaagtat
     1561 tagacggtat gcctgttccg gaagtgctga tgtctggaca ccatgaacaa attcgtaaat
     1621 ggcggttgga acaatcgctg gaacgaacgt ggttaagacg ccctgagcta ttggatagcc
     1681 tagctctgac tgacgaacag cgtgtgttgt tagctaaaat taaaaaacag cacaaaatca
     1741 gttaattcta ggattataga aggtttttaa aatgagtaac atcatcaaac aacttgaaca
     1801 agaacagtta aaacaagact tacctagctt ccgtccgggt gacacattag aagttaaggt
     1861 atgggtagta gaaggtagta aaaaacgttt gcaagcgttc gaaggcgtgg ttattgcaat
     1921 tcgtaaccgt ggcttgcact ctgcattcac tctacgtaaa gtttcaaatg gcgtaggcgt
     1981 tgagcgtgta ttccaaactc actcacctgt aattgacagc atttctgtta aacgtaaagg
     2041 tgcggtacgt aaagctaaac tttactactt acgtgagcgt tctggtaaat ctgcacgtat
     2101 caaagagcgt cttggcgact aattgctaca aaacagtgaa atgcacaaaa gccttgagga
     2161 aactcaaggc ttttgctttt tgtacttaca agcagttatt tttcctcaat gatttacaaa
     2221 tcttgctttc ttttttgtta taatgttaac aagataacat taatgatagg tgtcgatatg
     2281 aaacaattaa gtattagatt gccagacgat gaatttactt ttattaaaac atttgcttct
     2341 gctcataaac tgactttaca aaattttgtg atgtccgcaa tccaagctaa agttgcagaa
     2401 atgtctgcta aaaataaaat atctgaagaa agtaacattc atcaacctct ttctaaagat
     2461 gaaaaaataa tgctaaatga ggcaaaagta ttttattctg ctcgttcgca tttaaaggca
     2521 gaaaatgtga ttcttccgag tgattttatg gagcaaatta aatcaggctg tggagcagaa
     2581 aaaatggcag aaatgatggg atataccaaa gaagattggg agtcaatgaa gtaatatggg
     2641 gcagattaca tttagtaata ttttcacaaa agtgattttt gagaatgtgc tttctgcttc
     2701 aactaaagag aaaataaaac aaatgctttt tcagtctgtg gttgcattac ctcctctcca
     2761 ttcagaaaga aaaatgattt tacagttgaa aaagcaaaaa attaccattt tttatcaagt
     2821 tattgaggaa caatctgtgc aaatcctcgc ttatcaattt ggtggaactg ataaattgac
     2881 aggtgtgtct aaagctcact ttaaaacact agatgccatt tttcaaatga cggatgaaga
     2941 gaaagaagga aaattctaat gtaagcggtt atttttccat atttttttgc aaataacgtt
     3001 tctcaaattt tgcttgatgg cgttcaagca cttccgtcat cgaaatgcca tatttatcgg
     3061 ctaatacaaa aagattatcc atcacatcgc ctaactcttc gattaagtta tctcgttttt
     3121 gctgttgtga agcttcggtt tcgtccggtc gttcacgccc gatttcaatc gctcttactg
     3181 cacaagccac ttcgccgatt tcttctgcta gataagtcac ccgcataaaa gggcttcgtt
     3241 cataccaacc ttgttgttgg taaaactggc gaacccattg ttgatattgt tcaatttgca
     3301 ttttatttct gattcaaaaa gtagggacga aaaatttttc gcccttttat aagaaaatgt
     3361 atcagggcaa atgatgattt gcccctagga gtgttactct gcctcagaga gaataatcca
     3421 gccactatcc agccagtcgc aaatggtgtc tagcattagc tccagctccg cttggtcttg
     3481 cactttggag gcaagtttgt tccacgaaat cgaatctcca ttggcgatac gaatcagtaa
     3541 tgccatttct gcttcgttta actcatcaat ccactcgcca tttacataaa cccgttgagg
     3601 gttctcggtg tagaggattt ttacatttgc atcttgctgt aaccagccgc cggcttcgag
     3661 aatttcttgc acttcgtcag ggtaatattc attgtcagtt tgcaataatt cataacggcg
     3721 ggagcttgcc gcagtggcaa cactgtgagt gagtaactca tcgaactgtt cggaattttg
     3781 gagcaagtcg attaactgat gtttaaacat tttcaccatt ttcggatcaa gcaacgcatt
     3841 cggctgttca ttcggcgtta agcggaacgg aagatgaaat tccgatgaat taatgttgtc
     3901 ggcttgttgt tcgatggttt tgcagagatt ttccagtaaa tcggtcgcat ttggataacg
     3961 taaaccaaaa gagaaagtta aaccttgctc gctttcggaa acaccatagt gagccattcg
     4021 agacggcaca taaagcacat cacccgggtt cattacctcg tccattacca gttcgcccat
     4081 atcatcaaaa atgcggatcg gttggtttgg tttgaattcg gtgcttggat cgcaccattt
     4141 gcctaattgc caacgacgtt gcccatagcc ttgcaccaag aacacatcgt actcatcata
     4201 atgtttgccg acagtgccgt tgagcggtga gcaagaaacc ataatgtcat cacgttgcca
     4261 ttgcgggata aaaccaaaag cctgccaaag ctcgcctagc tcaggagacc attgctcgag
     4321 gttttgcacc attacagacc attgtacagg taactcttcc aaatcttcct caacaagcgg
     4381 gctggattta acagaccatt tctcgttttc gcattgaatc aggcgtgcag tgacttcttc
     4441 ctctaatgcc agttctaaaa tatcttccgg ctcaaacaat ccgacaattt ggggtaagcc
     4501 gttacgaatt aatagcggtc gtttttgcca atattctcgc aaaaaggttt cagggctgat
     4561 attttcaggt aagcagaatg gaatgttcat aatggctcct tgctacgtgc ttctttgaga
     4621 ttactgatat tctacccgag aaatcaggaa aaacgggaaa ttttttatga tttagcgaca
     4681 tcattcacat tttgaagagg aaataatgaa aaaggcgaac attgttcgcc tttgaaattt
     4741 attttaaacc gagttttttc tcgagatagt ggatattggt gccacctttg cggaattctt
     4801 tatccgcaag aatttgagta tgtaaaggaa tattggtttt aatgccttcc acaatggttt
     4861 cggaaagggc attttccatc cggcgaatcg caatatcacg attttcagca aaggtaatca
     4921 atttaccaat cattgaatcg taatgtggcg gcacgctata gcctgagtaa atatgtgaat
     4981 cccaacgcac acctaaacca cccggaacgt gtaaacgggt aattttaccc ggcgatggca
     5041 agaaggtgtt tggatcttct gcgttgatac ggcactcaat ggcgtgacct ttcactttaa
     5101 tatcatcttg tgtgatcgaa agtggtaagc cggctgccac acgcagttgc tcttttacca
     5161 agtccacacc ggtaatcatt tcggttacag ggtgttctac ctgtaagcgg gtgttcattt
     5221 caatgaagta aaactcgccg ttttcatata agaactcaaa agtacctgca ccacggtagc
     5281 caatttcacg gcaggcattg gcacaacgct ccccaataaa ttgacgcaat tcaggtgtaa
     5341 taccctgagc aggtgcttct tccaccactt tttggtggcg acgttgcatt gaacagtcac
     5401 gctctgctaa ataaaccgca ttaccgtgag tatcggcaag tacttggatt tcaatatggc
     5461 gtggattttc taaatatttc tccatataca ccatatcgtt attaaatgcc gctttcgctt
     5521 cggctttcgt cattgcgata gattcttcca aatctttctc gtgatgaacc acacgcatac
     5581 cacgaccgcc accaccacct gatgctttga tgatcaccgg gtagccgata cgtttagcga
     5641 tttctttatt tttcttcgga tcgttaccaa ccggaccgtc agaacccggt acgcaaggca
     5701 cgccggcttt tttcattgca ttgatagcag agactttatc gcccattaag cgaatcacat
     5761 cagccgttgg accaataaag ataaagcctg atttctcaac ttgttcggca aagtttgcgt
     5821 tttcagataa gaaaccgtag cccggatgaa tagcatcggc attcgttact tcggcagcgg
     5881 caataatcat cgggatattt aaatagcttt ttaccgatgg agcaggaccg atacaaatgg
     5941 tttcatcggc taatttaacg tgttttaatt cacggtcggc agttgaatgc actgcaaccg
     6001 ttttaatgcc caattcttta caagcacgca aaatacgcag ggcaatttca ccacggtttg
     6061 cgataacaac tttttctaac atagggaaat tccttgtgtt ctagaaaatg tagggcgtgt
     6121 tgcacacgcc cgttggataa tttaaggaag agcttattca atgatgaata atttttggtc
     6181 gaattctacc ggttcgccat cattaactaa gatttctttt accacaccgg ctttgtctga
     6241 ctcgacacgg ttcatcattt tcattgcttc tacaatacat aacgtatcac cgattttcac
     6301 ggtttgaccc acttcaacga acggttttgc atctgggctt gggctacggt agaaagtccc
     6361 caccattggt gaaagcactg cgtggccact cgtttctgcg gcttttggtg cttcagccgg
     6421 agctgcaaca ggtactgtcg aagctacttg aggtgccgct ggtgcaacaa caggagctgc
     6481 tgcatattga actgcagctg gtgcaacagc tggagcagca cggctaatac gcaccgtacc
     6541 ttcttcttca gacacttcta actcggtaat gccagattct tcaactaatt caataagttt
     6601 tttgattttg cgaatatcca taataagatt ccgtatgtga ttaaataaaa taaaaaagag
     6661 aactccacat ttggggtata aattcaaatg tagagttaaa aaatgctggg cgtagaatac
     6721 ctgaatttcg ctaattttgc gaataaaatc tgataatttt ggcgaaaatg gacgatttta
     6781 gcattcatcg taccagttag gatttttgga aaatggtgac tcacaagcga ttgaaaattg
     6841 ccaatttttt gtaaaaaaca accgcttgtc agattatttc aataaatctt catttttctt
     6901 gtaattccac ttgctaccgg gcttgtcgat atactgaaaa tattcgttgg taaaagtacc
     6961 ttgagcacaa gttactttgt ctcggcggaa atttacttct ttatcaccaa tggcattatt
     7021 tagggtgtca ggaccggtca taacaaacac gccaccttca atccgacgat tctcaatatt
     7081 gctgataatc agctcaaggg tgtcttttag aatccaattt ccagcttccg aagccaagaa
     7141 aaagttggtg tatttatcac ggcgtttaat taacacttcg ctatcatttt cgccaataat
     7201 tttagagagt gggtaaacca aatgcccgtc aatatcaata taaatgccac cttctcggag
     7261 caaagtaaaa attcgccaaa aatcagcttg tgccgcacca tcggttaatt tgctataggc
     7321 gttaaaggtg cgttcatcgg cgttggcctt gatgtatgcc tctcgttctt ctgtgctaac
     7381 gtagcgataa tcgtagctca atgacattag gcggttaaac agataattcg catacattgg
     7441 caaggtgact ttgttagaat aattcgtttg ccaaatggtt ttggtaattt tgctcggaat
     7501 gcttgattgg atttttgccg ggctatattc cggaatggtg aaacgttttt tcggaaaaag
     7561 tgcatggaac ggataactca atattttgac gatattaccg aataaacgga agactccgtt
     7621 acagatcaca ataaattgtt catttttaac agccatttta ttaccttatg cttttaagtg
     7681 tgaaattgca aaatccaacg catattcata gccttttgcc cctaaaccgc aaataacgcc
     7741 ttttgcaata tcacttagat aggagtgatg gcgaaaaggt tcacggctat gaacgttaga
     7801 caaatgcacc tcaacaaacg gaatcgacac actcaataac gcatcacgaa ttgccacgct
     7861 ggtgtgagta aatgccccgg ggttaataat aataaaatcg gtatgctgaa aggcttggtg
     7921 aatacggttg ataatcggct cttcaccgtt ggcttgaaag ctctccagct caacatcttg
     7981 ggccgcagcc aattttttta agtggttttc aatatccgcc aaagtttgcg aaccgtaaat
     8041 ttgtggctca cgtttgccca acatatttaa attcgggccg ttaaggagaa ggattttttt
     8101 catatttact tattcaactt gtaattcata attaagccat tcacggtttt ctttcgcccc
     8161 caagcgttga taaaaacgaa taccaccgtc attccaagga ttttattgtc ttacaatgat
     8221 gtgccttcgc ctcatttttc aaggcttgca ttaacgcctc tcccactttc tgattccgag
     8281 cagtttcatc aacataaagc tctttcatat aaatagcggg gcggttttgg gcagtgtaag
     8341 gaagaaaata ataaaccaat atgccgataa tgttagacgc attttcagcc actaaacagt
     8401 aaaaatcggg tgggcttttg cgaaagccgg attccattac aacttcagga gtaatcgcaa
     8461 aagaatcgat atagtgctca aacacagcca gtttttgcat cagagggaac acttggtggg
     8521 tatcttgttc gaccattttg cggattgtaa atgccataaa attccttaca agcggtaaaa
     8581 aaatccctca cttttgcaaa gcgagggagg ttttaattat tcgtcaatag aacgtaataa
     8641 gtcgtttaag cccactttgc ttaaggtttt ctcatccact tttttcacaa tcaccgcaca
     8701 gtagaggttg tgtgaaccat cttttgatgg aagcgagcct gaaaccacaa cagagcctgc
     8761 cggcacacgg ccgtaatgta cttcgccggt ttcacggtcg taaattttgg tagattgacc
     8821 gataaacacg cccattgaga tcacgcagtt atcttcgaca atcacgcctt ctacgatttc
     8881 agaacgtgca ccgataaagc agttgtcgcc gatgatggtt gggttcgctt gtaatggctc
     8941 taacacacca ccgatgccca cgccaccaga aaggtgaaca tttttaccga tttgcgcaca
     9001 agaacccact gttacccaag tgtccaccat tgtgccttcg ccaacgtatg caccgatgtt
     9061 cacgaaagat ggcattaaca ccacgttttt ctcgatatgt gaacctttac gcaccaccgc
     9121 acccggcacg gcacgaatgc catctgcttt gaattgctct tcggtgtagt tgccgtattt
     9181 ggttggcact ttgtcgtaga atttggtttc tgcaccgtcg atgatttcat tgtcggcaat
     9241 acggaatgaa agtaataccg cttttttcac ccattggttt actacccact cgccatcttt
     9301 tttctcggca acacgcagtg aaccgttgtc taatcctgcg atcacctctt ctactgctgc
     9361 tttggtttca gcatcaacgg ttttcggagt aatttccgca cggcgttcaa atgccgcttc
     9421 aataatagct tgtaaagaca ttgttgtgtt ccttcaatat ataaattaaa acagaaaatt
     9481 cggctcactt tttaacatag aaaggcgttt atttccacaa gaaaaaacat atcgcagaaa
     9541 tttagtttat aattccaagc cacttatttg atacaagcgg tgatttttgt ggaaaatttt
     9601 gcaaatctgc ttaccggtaa aacgcgtgag catttagtgc cgttgccgaa cgctctttcg
     9661 gataaacatt accttcagcc tcaggtggtt gaggcttttt tgacgttgca gcatgctgca
     9721 aaacaagccg gctttaattt acagcctgcc agtacttttc gtgattttga acgccaaaaa
     9781 gggatttgga atgcgaagtt taggggtgag cgtaaggttc acgatgataa cggggttgcg
     9841 attgatatgg cggcgttatc ggatcttgaa aagtgcaaag caatgttgag atggtctgcg
     9901 gtgccggggg caagtcggca tcattgggga acggaaattg atatttttga ccctgattta
     9961 ttgccggaaa atacgccttt attgcttgag ccgtgggaat atttggaagg tggctatttt
    10021 gccgatttaa ccaagtggtt acacgttaat gcggaaacat ttggctttta tttcccgttt
    10081 gacggtaaac attctcgagt gggctttgag ccgtggcaca ttagctatcg cccgatttca
    10141 aatgaatatg agcaacgctt taacgatgaa atcttaaaag ctgcgtggca agatgaagaa
    10201 gtggcgggta aggaatgctt acttgaacat tttgaagaat tactaaaatg atccaattaa
    10261 ttaacgaaac ccaacaacac gacaaattcc gccaaatttg cgacaaatgg cagctggttg
    10321 aagataaatc cagcccgtta gccttagtgc taacggagga acgattggaa ctacgcaaat
    10381 tagacgaacc caagctcggg gcgattgcag tgaattttgt ggacggtacg atggcacatc
    10441 ggcgtaaatt cggtggtggg cgaggtgaag ccgttgcgaa agcggtcggc attaaagggg
    10501 attatttgcc aactgtgatt gatgcgacag ccggtttagg gcgagatgct tttgtattag
    10561 cagcggttgg ttgtaaagtg ctgttagtgg aacgcaatcc aattgtcgct gccttgttgg
    10621 aagatggttt aaaccgagct tatcaagatg tggaaatcgg cagttttatg caagaaagaa
    10681 tgatcttagc cgatgttcga gacatttctc agctagatcc acaatcccaa atggctgagg
    10741 tagtgtattt agatccgatg tatccgcaca aacaaaaaag tgcgttggtg aaaaaagaaa
    10801 tgcgggtgtt tcaacattta gttggggcag atttagattc ggacagcttt ttcttaccgg
    10861 caaaaggatt ggcaaaaaaa cgtgtggtag tgaagcgtcc ggactatgcc ccgtttttag
    10921 cggagcaaaa gcctgatttt tcacacacca ccaaaaatca ccgttttgat gtttatcttt
    10981 ctcacctgaa aaatgattaa aggtgggtca tgcgataggc aagcggttat ttttacagta
    11041 aaatttacaa attatgttat cgtttattta tatttaaaaa ggcggttatc gtgccacaac
    11101 gtgattatgt cgctcgttcc aacgagaaaa aaagtaaaaa aaatcaaaaa gaaagtaatg
    11161 ttaaaaagat tttaatgcgg attatcgggg taattttatt cttcggtatt ggtttatggt
    11221 ttttgaaatc cagtgcacct gtaccaacag ttccgtcagc accgcagcct gctaattcac
    11281 agactaaaag cgaattacca agtcgaccgg aagagacgtg gagctatatt cgtgatttag
    11341 aaacccgtac ggtaattacc gataatagcc aaacttcaca agaacgtttg gcacaattaa
    11401 cggcggaaca aaagcagcaa attgaagaaa gacgcaaaca agaagaagca cgcttagccg
    11461 ctgagcaagc tcaacaaaag cctgcgaccg atgtatctgc tacagaattg gctccgaaaa
    11521 cagaggaagt taagtcgtta acggaagaag aattagcagc aaaaaaagca caggagcaag
    11581 ctttagcaca aaagcaagcg gaagagaaac gcagacaagc agagcttaaa aaacagcagg
    11641 aagcgaaaaa agagcagccg gctaaaattg tagcaagtgc tgcaacactg gcagataaag
    11701 ctgcaaatca ggcgggtaaa tttgggttac agtgcggtgc atttaaaaat aaagcccaag
    11761 ccgaaaatat gcaagcaaga ttggcaatgg caggttttaa cgcccgtatc gcaagcagtg
    11821 ccgattggaa ccgtgttttt gtcggcccga taggtgacag agcggcaact tccagagctc
    11881 aatccaatgc acgcagtgta gcggaatgtg tgattgtggc gatgtaaaat tgattgaaat
    11941 attgaagaga gctataggct ctcttttttt atatcccaat cgcatatttc aaggcttgct
    12001 ttttgatggg tgacacttta tcagccaata ctaaaccgac attgcgggca attttgagcg
    12061 gtaataaatc ggtcttaaac gctttataaa acacgtccat gcctgtttgc atcagtaaat
    12121 tatccggttt acgtttttgc tcatagcgtt gaagcacctg ctcacttgca aaatttttgc
    12181 cttttttgac cgcttgttcg atcacctcaa gcaaggtttt aacatcttta aagcctaaat
    12241 ttacaccttg tccggcaagc ggattaatgg tgtgagccgc atcgccgact aataccaccc
    12301 cgttttgcac atagtgctga gcgtgctggc gggttagcgg gaaagcccct gaagcctgca
    12361 cctgaatgtt gcctaattct gcgttgagcc ggcttgggaa atgttgctca atcgcaactc
    12421 ccagcttttc tgctggaagc attttcagtt cggcaatttt ttgtggtgaa tcgtaccaaa
    12481 caacgcagcc gtgattgccg gaaagcggta aaaaggctcg agggccggtt ggatagaatt
    12541 gttgccaagt gccgcttgga gcaggttttt cggtggtaac ggtggcgagt aaacagtgtt
    12601 ggcgatattg ccaagcggtt aaaccaatgc ccgcccattg gcgaacctgt gaatttgcac
    12661 cgtctgcggc aatcagcagt ggggcagcaa aggtgttgcc atcaaccgtc acttcccaat
    12721 actcgcccgc tttatttgca aaaatttgct caaatccgac cgcttgtagg cagtttggat
    12781 attgctttaa ttgctcccat aacgcaattt gaataacgtt gttttcgacc atatcgccga
    12841 gcttttccaa acccaaatca gctgccgaaa aaagagtgtt gaatccatca atttcccagg
    12901 tttcgagctg ggtataaggg gtgcttctca ttgcaacaat ttgctcccac acgcccaatt
    12961 tttctaacag ttgaatcgag cccatactaa tggcggaaat tcgcaaatcg tagtctgaat
    13021 caggattaaa ggtcggcaga gggtttttct ccaacaaggc taaacgcagc ccctgttttg
    13081 ctaagcctag agctgttgct gccccaatca taccgccacc gattacaatc atatctaatt
    13141 cagttttcat tttttcttcc tttttagtta ggcaaaatac tgctaaaacg ccttgaattg
    13201 tagtgcattt cagattagga tcaaaccgat ttatctattt atctaaggag cgttttatgt
    13261 cttgcaaaac tcatgcaaac cacgagcacg aacacggcga aggctgtggt catactgcta
    13321 ttaaacataa cgaccatatc gactatttac acgatgggca tttacaccac aacaaacacg
    13381 gcgatcacta tgacgaacac gttttagaag tgaatgaaac caacccggca gactgtaatg
    13441 ccgcccattg ctgcggcgac cacgttcatg gtgaggtttg cggacacgaa gctgtgccgc
    13501 acggcgatca tatcgactac atcgtgaatg ggcgtttgca ccaccaacac ggcgaccact
    13561 gcgatgacca cgggccggtt gaaattgtga aataagattt ttgatgggag gttttagcct
    13621 cccattatta tttttgcgat ctcgctcgaa aaattgaaca ttcctgctac ccctcttccg
    13681 attttccttt tatgctctcg gtattgattt ctaataccga aatgtgatga ccttagcgat
    13741 tgtttacagc cgagcctcca ttggcgttga agccccgttg gtgacgattg aagtgcatat
    13801 tagcaacgga caaccaaaat taaccattgt cggcttgccc gaagccacag tgaaagaggc
    13861 tggtgatcgt gtgcggagtg cgttgctgaa cgctaatttt atctacccgc cacaacggat
    13921 cacgattaat cttgctccgg cagatttacc caaagaaggc ggacgttttg acttgccgat
    13981 tgcgattggc attctggcag cctcagggca aattgattct gatttattaa cgcagttcga
    14041 gtttttgggc gagttggcac tgacagggca tttgcgagga gtgcacggca cgattccggc
    14101 agtgatttct gccgataaag ccaaacggca gatgatctta gccaagcaaa atgcgaatga
    14161 ggcatcgctt gtttccaatg ccaccaccta ctttgccggc tcgttgttgg aggtggtaaa
    14221 tatgctcaac aaacgggata aactgccgat ttgtcagcac atttcgcaac attctgccga
    14281 aattcgaccg cttgtcagcc gagatcttac tgatattatc gggcaacaac acgccaagcg
    14341 agccttaatg attgccgctg ccgggcaaca taatttgctg tttctcggac caccgggaac
    14401 gggtaaaaca atgttggcaa gccggctggc ggatttactg ccggaaatga ccgatgagga
    14461 ggcgattgaa accgcctcgg tgaccagcct tgtgcaaaat gagctgaatt ttcagaactg
    14521 gaaacaacgc ccgtttcgtt cgccccatca cagtgcatca atggtggcat tagtgggagg
    14581 tggctgtgaa aactagaaat aaatgtcaaa aacaagaaat aaatgtcaca aatctttctc
    14641 taatttcgct ataattcgat catcaaaact ttaaggggaa atccgttatg ttctacctca
    14701 ataacgacaa tttcaaacga gaaccttatc gtggatattg tccgagtcac cttgaaaagc
    14761 tttttactaa accacacctt gatattagag gtaacggtta ttattaccct gacaatgaat
    14821 atgttgtagc ttggtatgaa tcggacttca ttttcaaatc aagaaaagct caagcacatg
    14881 caaaagtaaa gcttgttaat ttaacttgcc ccaaatacac tggcaaaaac agtgctgaat
    14941 atttaagcgt tttgtatatc tccgttcccc ttaattatct acattatttc actatcggca
    15001 gtatctggaa aggcggtgtc gccaaagagc agtttgctct cgaagaattt tacattacgg
    15061 ttgaagctga aaatcaagat ggtaaacgag aaaacctctc aatcgtttca ttcggtgaga
    15121 gtgaggaaaa cggtttagag aaaccatttg attacacaat ctacactatc cccacagaat
    15181 atcacaacta cggtgatgac ctaaaccgac tactttccat ctcttaccaa aatcaaaaat
    15241 tcattatcca tccgctacat atttttatga tgcactacgg gtactctacg gacatcaagc
    15301 gtatcttggc aacataccca cttgacgagg taagagaacg cctatttata gataaggtcg
    15361 ttgagaattt tgatgtagag cgttatgtcg ttttaccgaa atactttgta aaaaaagatg
    15421 cgattttcct ctatcacttc aaatatgacg aagagactac gggaacaagg gtaaaaaagc
    15481 ttgtaagcca gtttaggtta aatattcaca atcaaacaca tccaatagaa atagattttt
    15541 ggcacacgca aaaggttgaa ttgaaaatcc gtggtgttcg acttggaaat gctgtgttat
    15601 gcgcagaaat tatcggtctt aatcagcccg aaggcgaaga tattacgcta gtgctatctc
    15661 aatcgaaaag agaaaaatcg ggtaataaaa ccgaggaaca aaataacgag gtaaataacg
    15721 ttcctattac cagagtttat acacgagaac ctgaattgga tgagttacca ctcaccgata
    15781 actccccaga taatcgaaca gtcgaataca acaagcgaca atttgaactc ttgggccgtc
    15841 aacgccaaat cagagcgctc aagaaagcac gcgaagagag taatcagaaa atgaaagcct
    15901 tgactccaga tgagatagac tcactgggtg taggtgaatc agatggccga aacggtaagg
    15961 ttggactcgc tttctgtttc cttgatgata cacctgttgg caaaagctcc aaactataca
    16021 aattatggca gcacgcgaag gctgttgcgg aatggaatca cggtgaggcg cactggtaca
    16081 cgcctaatct cggttttaga aatgacgatg aactccttcc cgtttcctta gaaaccaaca
    16141 aatgtttcga ctaccctgaa atcgcgataa ttatccgcct ccaaatatac ggagaaacat
    16201 ttttcctgat tgatttctca atgaagcaaa gagatataag cattcgtggc ttagggtata
    16261 aacccgatcc aaacgaagat tttctctatg aaagtgatat gagcaaaagc gaattatccg
    16321 aattattgtc cgcagttcat catcatgaac atctgccaaa agagtacata gagaaaaaga
    16381 acaaagaaaa aaccaaactc actacattta accatagcga agccgaaagt agtaactggg
    16441 cttataacgc ggtgcaaaaa ttaacttcaa gggcaattac taagccgaca tatttttaat
    16501 tatttttatg aatgcagaac aacgtgtaat tgttactccg acattttggg gtaaattttt
    16561 tggaaaaatt aaaagtgttg aacttcaaca aaacaaagtt atcgtaactg acaaaaagaa
    16621 taatataact gaacatgatt taggaaaaac ttttgacttt ccagctatcc agaagtcttt
    16681 ctttggtact aaattatttt ttaaagacga tagcacagaa gttgttttat caaaacttgc
    16741 gaaaaaacaa actgatagtc tattacttga aatcgaaaaa gtagttgcat ctaatattaa
    16801 agtgaaagta aaagagggtt ttcaacactt tgcaaattta gccgaaaatc aatatctcag
    16861 agattccgac attcctacat taaatgatcg tgtaagattg tcagtgcttt cctatgggga
    16921 taacaaagaa cattttcaaa aatactttga tgaaagtttg gttaagaaaa ttcaatatat
    16981 ctcttcactt tttcctgtaa atgccataaa tgctcaaaca attcgaagag aatacgagca
    17041 acatgtttta aatcatcgca agcatttctt tgatgtcatt gaatctaatc cgcttactga
    17101 gcaacaaaga ttgtcagtca ttcggaacaa cgacatcaat atggttcttg ctgccgcggg
    17161 gacaggaaaa acgtctgtaa tggtcgcaaa agcattggac ttaattgatt ctggtgcttg
    17221 taaaagcgaa gatattttga ttcttgcata caaccgcgat gcagcaaccg aactatccga
    17281 acgcttacaa gaacgtgcac gagaagccaa tttagatctg gaaaatagcc ctagcatctc
    17341 gactttccat gcgcttggcc gaagaattat taaagaatgt ggaaaatcag tccacttgtc
    17401 aaaatttgcc gaagatccga tgaaattaga tagatggttc aacaaatggc tagaggacta
    17461 catcaaagaa gatcctgata atcttgcaaa attcattcaa cttgcatacc aacctatcga
    17521 tccattccaa ttcaaaacga aagacgaata cgatagatat gtaaatgaca atgactatcg
    17581 aaccttacaa ggcgaacgcg ttcgtggtta tcaagagtta ttgatcgcga actggctttt
    17641 tagccacagc gtagaatatg agtatgaacc aaggtatgta tcaaaacgcc gtatcgagat
    17701 tggttttgac tacaaacccg atttctcttt gggtgatggt gtttaccttg aacatttcgg
    17761 cattgaccga caaggtagaa ctcgcgcaga tattaacgcg caggaatata atgccaatat
    17821 ccaaagaaaa cgtgagttac acgccgaaca taatacaaca ttactggaga cataccacta
    17881 caactgggtg gaaaatacgt tatataaacg actagagcaa ttgatgaatg aacagttcat
    17941 tcctctgaag ccaaaatcac aacaagagat tttagatgca ctcaatgaat caggaatctt
    18001 caaagaaaac aaaaatcgct atttgaagtg ccttcaagct attcgtacag agcgattaga
    18061 ctatcaacaa atcttaaaac gtctaaccga tgcgaaaatt gtctatgcta aagaatatgc
    18121 gacattgctc atgcgtattc atgatgccta cgttaaagaa ctacgtagcg caaatgaaat
    18181 cgactttgac gatatgattt tgttggctac tcaactggtg aaaacaggtg agtttaaacc
    18241 taaatggaaa catattttag tcgatgaatt tcaagatatt tctatggctc gattggagtt
    18301 attgaaagaa atttatacta aagggcctcg accgatttgg actgttgttg gagatgactg
    18361 gcaatcaatc tatcgtttct ctggcggtaa actagaagtt actacgcgat ttaatgatat
    18421 ggtcggctca cacacgctaa gtaaactaga aaaaacctac cgctataaca atagtattgc
    18481 tgacacagca ggtcaattca ttatgcaaaa tcctgagcag tatcagaaaa atgttgtaac
    18541 gcatacaaag gtcgctgatt cttgtgttca tttgtatgac tctcatgtcg taaaggatga
    18601 aaaatcagaa gccaatatca gtttaaaagc ctcagcaata ttaaaactga tacgtcaaaa
    18661 agcacctgaa gccactgtcg caattttggc tagataccgt taccttttag aagatgcaaa
    18721 aagtgtaatc aaagataaga atgttaaatt ttggacgttc cacggctcaa aagggttgga
    18781 agcagattac tgcattttac ttggtttctt ccaaggaaaa gtcggatttc ccaaccaaaa
    18841 taaagaagaa gccgttgtag aagcattgct tcctatgcta gacagttttc cacactcaga
    18901 agaacgtagg ttattttatg tggcattaac gcgtgcgaaa aaagaaagtt atttgatcgc
    18961 agatgcgaac gcgccatcag aatttatcaa tgaattatta tcaccgaaat acaagataga
    19021 tattgtgtca aaacgattcc aagaacgtta tcggacaatc tttaaatgta atgaatgtag
    19081 cactggctat ttcgtgatga aacaaggtaa atttggtcag ttctattctt gtacatcagg
    19141 ggaagtatgc cgctcttcgc cacggatttg tgaaaaatgt ggccgtccta tgaagctgcg
    19201 agaaggtaaa tttggtcagt tttggggatg ctcaggatat ggaatcaaag gcgatcaatg
    19261 tacgaatact cgtaagtatt ttatgtaata tattattttg gaggattttg tggatttatt
    19321 tgaatcaaaa aaacaattaa tagagttaat taaaaagtac gatagtgata aagaaattta
    19381 ttcttcatcc tcatacaatg agtctcagtt aagaactgac tttttagacc ctttctttgg
    19441 tttacttgga tgggatataa ctaactcaaa gaataaactc acatctgaaa gagaagtgat
    19501 tgttgaagaa ccactaaaag aaaaagtttc agaaaatgta aaaaaaccag attatacatt
    19561 tagattcaat tctcaaagaa agttttttgt tgaagctaaa aagccaagtg tcaaaatcaa
    19621 gactgaccct ttacctgctc atcaggtaag acgatatggc ttcacagcaa aattaagtat
    19681 ttctgtttta tctaattttg aatatcttgc tatatatgat tgttcagaaa tagttgatgt
    19741 acaacaagat gctctatacg caagggtacg attatatcac tatacagaat atgtgaaatt
    19801 ttttgatgaa attatgaatc tcttaggtag agaaagtgtt tattcaggtc attttgataa
    19861 tgaatggcgt gaaatctctc aaaaaataga aaactctaag caaacagtgg atgaactatt
    19921 ttttgaacaa attaataagt ggcggcatgt tctgggtagt gaattactta aaattaaccc
    19981 ttgtatttca aacaatgaat taaa
//
LOCUS       DANLZQ010000033        19911 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.033, whole genome shotgun sequence.
ACCESSION   DANLZQ010000033 DANLZQ010000000
VERSION     DANLZQ010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 19911)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19911)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19911
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.033"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(82..720)
                     /locus_tag="PXE50_001116"
     CDS             complement(82..720)
                     /locus_tag="PXE50_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HDL5622041.1"
                     /translation="MRYTTEQIIEKLRQLKVVPVIALDKAEDILPLAKTLSENGLPVV
                     EITFRSEAAEEAIKLVQANYPEVLIAAGTVLTKEQVLTAKNAGADCIVTPGFNPTIVK
                     YCQVLGLPVTPGVNNPMAIEAALELGIQAVKFFPAEASGGVKMIKALLGPYGNLQIMP
                     TGGISPQNINDYLAIPNVVACGGSWFVEKSLIKEQKWEEIGKLTKEVVELVK"
     gene            complement(808..1755)
                     /locus_tag="PXE50_001117"
     CDS             complement(808..1755)
                     /locus_tag="PXE50_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HDL5622042.1"
                     /translation="MKKLAILGECMIELNGEPFGEMHQTYGGDSLNTATYLARVSSPE
                     QIEVRYISALGTDKLSQGMLAAWQVDNINTDFVLRDEHRQPGLYLIQLDKQGERTFLY
                     WRNQSAARYLLQHPGYPKALSALNEVDMVYLSGISLAILPENDRTLLIAQLRELKTQG
                     VKIAFDSNYRPKLWESVAAAQAHYAELLQLVDLALVTFDDEQLLWGDVNEQATFDRLT
                     QYGIQTIVVKQGSLGATVLQNGERTFVPTVAVEKVVDTTSAGDSFNAGFLNGYLLGKD
                     VVTCCQQGNAVAGIVIQHKGAIIAKSATTHLKSQFEQSI"
     gene            complement(1772..2617)
                     /locus_tag="PXE50_001118"
     CDS             complement(1772..2617)
                     /locus_tag="PXE50_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDL5622043.1"
                     /translation="MSIAQNHNFKDKVVVITGAGGVLCAYFAKEIAKTGAKVALLDIN
                     LEAAQNFASEIADEGYIAKAYQTNVLELESIKQARDEILKDFGTCDILINGAGGNNPK
                     ATTDNEFHDINLPENTKSFFELDKAGIEFVFNLNYLGTLLPTQVFAKDMLGKEGANII
                     NISSMNAFTPLTKIPAYSGAKSAISNFTQWLAVYFSKVGIRCNAIAPGFLVSNQNKAL
                     LFNADGTPTARANKILTNTPMGRFGQADELVGAILFLMDHHYSSFINGVVLPVDGGFS
                     AYSGV"
     gene            complement(2629..3900)
                     /locus_tag="PXE50_001119"
     CDS             complement(2629..3900)
                     /locus_tag="PXE50_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005668000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HDL5622044.1"
                     /translation="MLWLFLGSLFLFLFLGVPVALSMLLSASFMLWKMDMFDAQLITE
                     NFVMGTNNFPLMAIPFFMLTGEIMKHGGISERIINFAMSMVGHIKGGLGYVVIISGLI
                     FAGLSGSAVADTAALGAILIPMMVARKYDVARSTGLICAAGIISVVIPPSIPMIVYGI
                     TAGASITKLFMGGMVPGFLMVLGLWLVWKFLYRNEEQTVEPKKTGKERWAAFKSAFLP
                     LLLPIIIIVGLRGGIFTPTEAGVVAAIYAAIISIILKGLTLDKIQDVFLGTIKTTAMV
                     MFVAAAAMISAFAVTVAQIPMELVEFIKGITDSPTVLMFVIMIFLLLVGCVMDLIPAV
                     LIFVPVLLPLLRAYNIDIAYFGIMMVINLSIGLITPPVGTVLYVGSGIAKIGIARLTK
                     GIYPFLLVYAAILFLLILFPEIIIVPMNWLS"
     gene            complement(3903..4382)
                     /locus_tag="PXE50_001120"
     CDS             complement(3903..4382)
                     /locus_tag="PXE50_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HDL5622045.1"
                     /translation="MQISTALDRTLKLLAIIALSTMIILVFFNAVLRYFFDSGIAWSE
                     EFARICFVYMIFLGIILVAKERGHLTVDIVVSALPAKVQMYLLFFADILVLVALSFIT
                     YGAYQLMLLTYTQKMPATEISSAFLYFAAVISSISYFAIVFTNLWKHIRLAFIKEEK"
     gene            complement(4443..5426)
                     /locus_tag="PXE50_001121"
     CDS             complement(4443..5426)
                     /locus_tag="PXE50_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HDL5622046.1"
                     /translation="MKLKTFTKALLISSLMFTGSAFAKTIIKIGHYNSDVHPSNIALQ
                     EYFKKTIEEKTEGRYEIRIFPNNQLGGEDQIVNGLRNGTIEGGITGLLLQNVDPIFGV
                     WEWPYLFKDNAEAKKVLESPIAQEIGEKMEKYGIKLLAYGMNGFRVISSNKKVENFDG
                     FKGLRLRVPLNSLFVDWAKAMHINPQSMPLSEVFTALEQKVIDGQENPYMLIKDSGLY
                     EVQKYIIESNHIFSPGLLQLSLKTWNKMSKEDQTIFLEAAKLYQEKEWELAMKMEQDV
                     KDFFHKNGKEVIVPSEQFKADMLKASETLYQNFYQKYDWAKDVISKIHAAK"
     gene            complement(5455..6480)
                     /locus_tag="PXE50_001122"
     CDS             complement(5455..6480)
                     /locus_tag="PXE50_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HDL5622047.1"
                     /translation="MEKPLKSVCLVEPNKVGIQTVSYPVKGENDVLIKVEGMGICGSD
                     IGAFRGTNPLVTYPRILGHEIVGTVIESGKGMPNNINVGDRVIIEPYIYCGHCYPCSI
                     GRTNCCESLKVLGVHIDGAMQEVVRHPAHMIIKTPDMPIHELALAEPLTISLHAIHRT
                     KVKAGEHVAIIGAGAIGLMAALVAKAYGATPILIDILDKRLDYAKSIGIPHTINPTKE
                     NDLEAIKSITNGRMAEVVIEASGANVAVQNTLKYTSFAGRIALTGWPKTETPLPTNLI
                     TFKELNIYGARTSKGAFEEALELLASRRIEPKDIISKVITFDEIPHYIEELSANPDDY
                     LKIIAVF"
     gene            6644..7405
                     /locus_tag="PXE50_001123"
     CDS             6644..7405
                     /locus_tag="PXE50_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FCD domain-containing protein"
                     /protein_id="HDL5622048.1"
                     /translation="MQNSSRTYTKIGKILKEEIAQGKYRVGDKLPTERDISERFEVSR
                     TIVREAIVMLEVEKLIEVKKGSGVYVIRVPELFPEDFPEEKDNELRDVGPFELLQARQ
                     LLESSIAEFAAQQATKQDIQVLRNILESEKKLLLEKMDDYSADKEFHLALAHMTGNDV
                     LIQLQEQLWRYRFNSAMWAQLHSRILQHDHHHLWIEDHERILNAIQRKNPALARKAMW
                     QHLENVKTKLLELSDVEDPKFDGYLFNVNPVVVGI"
     gene            7435..8619
                     /gene="uxuA"
                     /locus_tag="PXE50_001124"
     CDS             7435..8619
                     /gene="uxuA"
                     /locus_tag="PXE50_001124"
                     /EC_number="4.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012341261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannonate dehydratase"
                     /protein_id="HDL5622049.1"
                     /translation="MEQAWRWYGPNDPVSLDDVRQAGATGIVTALHHIPNGQVWSVEE
                     INKRKALLAEKGLVWSVVESVPVHEEIKTQTGNYQQWIDNYKQTLRNLASCGIDTVCY
                     NFMPVLDWTRTDLEYEMPDGSKALRFDQVAFAAFELYILKRPGAEATYSSAEQAEAKA
                     YFEQMSDADIAKLTKNIIAGLPGSEEGYTLEEFQAQLDRYQGLSAEKFRTHLAYFLNE
                     IVPVAQEVGIRMAIHPDDPPRPILGLPRIVSTIEDMQWFVETQPLAANGFTFCTGSYG
                     VLAENDLVKMAEQFADRIYFAHLRATQREENPQSFHEADHLAGDVDMFGVVKALLTEE
                     YRRKANGDHRLIPMRPDHGHQMLDDLKKKTNPGYSAIGRLRGLAEFRGLELALKKVYF
                     ND"
     gene            8670..9539
                     /locus_tag="PXE50_001125"
     CDS             8670..9539
                     /locus_tag="PXE50_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL5622050.1"
                     /translation="MFKKYFGEIILFLVTFIAAAGWFFSKHALVGLPPIGFMGGRFIL
                     ASLILLPFSYRELYRLDKVQVKYSVITGLTYGIYTIFWVLGLAFSTVFGEGAFLVSLA
                     MLIAPLLSWLIFKHTPPKIFWLALPIALSGLYFLSAEKGIFHFSLGSTIFLVSSVFGA
                     LYFVLNNQYAKQVSLFPLITIQLAIVGAVCSLYSYFMESWHFPILTEVWLWFAASVLI
                     ATNLRFLMQTLGQKYCHIGTSALIMLLEPVWTLLLSVMLLGEQLSATKWLGCSLILIA
                     LIIYRLPILRLKK"
     gene            9707..10021
                     /gene="rsfS"
                     /locus_tag="PXE50_001126"
     CDS             9707..10021
                     /gene="rsfS"
                     /locus_tag="PXE50_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HDL5622051.1"
                     /translation="MEQNLVEFLTKTLDDLKAQDILAIDVKGKSSITDTMILATGTSS
                     RHVASTAERLITEAKQAGFEVFGDEGKAVADWIVVDFGKAMVHLLQSDSREMYQLEKL
                     WA"
     gene            10098..10565
                     /gene="rlmH"
                     /locus_tag="PXE50_001127"
     CDS             10098..10565
                     /gene="rlmH"
                     /locus_tag="PXE50_001127"
                     /EC_number="2.1.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010618862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HDL5622052.1"
                     /translation="MKIQLIAVGTKMPAWVTTGFEEYQRRFPKEMPFELVEIPAGKRG
                     KNADTKRILELEGKAMLAAAGKAKIVTLDIPGKAWTTEQLATQLEGWKNDGRDVALLI
                     GGPEGLSPECKAAAEQSWSLSPLTLPHPLVRVVVAESLYRAWSVTINHPYHRE"
     gene            10589..12538
                     /gene="mrdA"
                     /locus_tag="PXE50_001128"
     CDS             10589..12538
                     /gene="mrdA"
                     /locus_tag="PXE50_001128"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HDL5622053.1"
                     /translation="MFGKLAKFTASNQREKVRDGQAESNLYARRALVAFLGVLALSGV
                     LLTNLYHLQVVNYEDYQTRSNGNRIKLLPVPPARGLIYDRNGKVLAENLTYFGLFIVP
                     EKTENIEQTLTELKDIVGLTDEDIENYHKEKKRSSRYTPIMLKGNLNEAQMARFAVNQ
                     YRFPSLDVQAYYKRNYPYGELLTHIIGYVAKINENDKKKLQEAGKFGNYAGSHDMGKL
                     GIEKFYEDQLHGVTGFEEVEINNRGKVIRKLRDQAGVAGSSIRLSIDVELQQYVMSLI
                     AKHKGAVVVLDPRDSSILAMVSNPSYDNNLFVGGISGQDYKALLDDPTRPLYSRTTQG
                     TYPPASTIKPFMAVAGLEEGMITPSTTISDPGYWILPGTTQRYRDWKRSGHGATNVNK
                     AITESSDTFFYQLAYKMGIDKMSDWMKKFGFGVKTGIDIFEESAGVMPTREWKQKRYK
                     KPWVQGDTIPVGIGQGYWISTPLQLAKATAVLINNGRVNTPHLMLEVQSSNSVTPYQD
                     PLLYEDIKGVPDVYWNLAKQGMYNVNHAANGTARKVFAGAFYHSAGKTGTAQVFNLNG
                     KNYDKNAIKKELHDHAWFIGYAPYEQPKIVVALILENAGGGGSAAAPVARQIMDYALR
                     KGIGEQPDSQNSEQNKPLVTEEHHE"
     gene            12531..13658
                     /gene="rodA"
                     /locus_tag="PXE50_001129"
     CDS             12531..13658
                     /gene="rodA"
                     /locus_tag="PXE50_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HDL5622054.1"
                     /translation="MNSGFKKLFWKIFSLDLLLLSGLLAITGYGLLVLYSASGANERM
                     FTSRLIQVSLGLGLMLIMAMVPPRFYQKVSPYLYIFCLILLILVDLVGETSKGAQRWL
                     NLGFVRFQPSEIAKLAVPLMVATYLGKRPLPPSFKDTFIALAIIIVPTLLVAIQPDLG
                     TSILVCSAGIFVLFLAGLSWKLIGAGVVFLAGFIPIMWFFLMHDYQKTRVMTLIDPNK
                     DPLGAGYHIIQSKIAIGSGGINGKGWMEGTQSQLEFLPEPHTDFIFAVLSEEHGMIGV
                     LILLAIYLFIIARGLVIGTKSDSAFGRILSGGTALLFFVYVFVNIGMVSGILPVVGVP
                     LPLFSYGGTSYVTLMAAFGLMMSTYVHRKRVGSNNPYDKLK"
     gene            13750..14409
                     /locus_tag="PXE50_001130"
     CDS             13750..14409
                     /locus_tag="PXE50_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HDL5622055.1"
                     /translation="MRLGKIVTLLLAGFLTFSSLNSLAATKNTKAKSSILAKKQATSK
                     AIKKVGISKVKKKEVVAKATKKKTISTVTTKPIKSTKKLARKVVKKTVTAKKKLVKKQ
                     HKPLVKKHFQTGVASYYANYFNGRRTANGETFNNAKMTAAHRTLPFGTLIEVTNLRNG
                     RSVVVRVNDRGPYAHARVLDLSSAAAKKIGMHHSGTARVKIAIVDKSKLGSTNQFYVM
                     N"
     gene            14423..15601
                     /locus_tag="PXE50_001131"
     CDS             14423..15601
                     /locus_tag="PXE50_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HDL5622056.1"
                     /translation="MKKTLVKAMSVVGFAVSSIAYADLNTNFNLSAPQINAQTYILMD
                     YNSGEVLVSLNPDQRQYPASLTKMMTSYVVGEALKSGKVQNSDMVIVTENSWAQKFPG
                     SSLMFLDLNSKVSVGELMKGLIIVSGNDASVALAEHVSGSQAAFINEMNKYAQQFGLK
                     NTHFTTVHGLDDPEQYSSARDMAIIGSHIIRDQPEEYKIYAEKEFQYNIKKPQPNRNG
                     LLWDKTIQVDGMKTGHTDKAGYNLVASAINPNTRLISVVMGVPTYKGREVESKKLLQW
                     GFANFETIKSIPAAQSVAEQSVYYGEVNKVQLGSVQDSFVTIPKGRSADLKARYELEK
                     KNLEAPLAKGQVVGKMIYQLDGKDVASTNLQVLQDVPEAGIFGKAWDWIALTVKSLFD
                     "
     gene            15769..16068
                     /locus_tag="PXE50_001132"
     CDS             15769..16068
                     /locus_tag="PXE50_001132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HDL5622057.1"
                     /translation="MSQPKAINLQDLPQAKLKDLLEFPCHFTFKVVGANREDLVDDVV
                     VVTQKYAKGDYNPRQQKSSKGTYNSVSIDIVAENIEQVETLYTELAKINGVRMVL"
     gene            16130..16783
                     /gene="lipB"
                     /locus_tag="PXE50_001133"
     CDS             16130..16783
                     /gene="lipB"
                     /locus_tag="PXE50_001133"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HDL5622058.1"
                     /translation="MKLIIRQLGIQPYEEIWHQMQSFTDSRDGNTDDEIWLVQHPAVF
                     TQGSAGKPEHLLNPTNIPVVQSDRGGQITYHGEGQQIMYVLIDIKRLKSLGKEVSVRD
                     LVTALEQTVVQTLAEYGIESYPKADAPGVYVDGKKICSLGLRIRKGCSFHGLALNINM
                     DLTPFQNINPCGYAGLEMCQLSELVHRPDLRCEEVAPKLVAHFSTILGYNNQQIINN"
     gene            16798..17805
                     /gene="lipA"
                     /locus_tag="PXE50_001134"
     CDS             16798..17805
                     /gene="lipA"
                     /locus_tag="PXE50_001134"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HDL5622059.1"
                     /translation="MATSTAQTTATATVKKMSPFKMEKGVKYRDAAKTSVIQVRNIDP
                     DQELLKKPEWMKIKLPANSAKIDSIKNGMRRHGLHSVCEEASCPNLHECFNHGTATFM
                     IMGAICTRRCPFCDVAHGKPLPLDPDEPRKVAETVQDMKLKYVVITSVDRDDLPDRGA
                     AHFSATVREIKALNPHCKVEILVPDFRGRVEQAVAILKENPPDVFNHNLENVPRLYRE
                     VRPGADYKWSLELLKIFKQEFPHIPTKSGLMVGLGETNEEILEVMQDLRDHGVTMLTI
                     GQYLQPSRHHLKVERYVPPAEFDMFREEAEKMGFEHAACGPFVRSSYHADLQAKGELV
                     K"
     gene            17992..19095
                     /locus_tag="PXE50_001135"
     CDS             17992..19095
                     /locus_tag="PXE50_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5622060.1"
                     /translation="MKKLLLNSVFAATLLAFGATANAEIKTITDVLGREVKVDVPAKR
                     VALTFYYPDYIAVTGVENFDKVVGISREFWEKFNPGSWALFAEKMPNLKNIADLGYVN
                     SGTFSTEKTIALKPDVLVLPEIQYQALASEISRIEQAGIPVVVDFNKQTIENHTKSVR
                     VFGQLTGTEERAEKIAKEYEEGIADIQSCIDNAKVSKPKIYAEFGNKGPKEHSFTFGK
                     NMWGAIAETVRGDNISAPFVENWGQINPEQVLVSKPDVIMISGTELGNDTNPEIMSMG
                     INIEEADAQKRLKGFIERTGWKELPAVKSGRVYGLYHTASRSISDLASAQFMAKALYP
                     ELFKDIDPEKTYLDFHNNYLPITPKGTFFMQLK"
     gene            complement(19186..>19911)
                     /locus_tag="PXE50_001136"
     CDS             complement(19186..>19911)
                     /locus_tag="PXE50_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDL5622061.1"
                     /translation="SVVADKINLHFEQGKIYTLLGPNGAGKSSLLKTLFGEIAHQGTI
                     DFDGNKLTSSHLHSWRKEIGYMPQDTQVEASLSALEVILLGQLDSLNMYISDELLNEA
                     VDIMDKLGISHLAHQDIMRLSGGQRQMVMFAQVLLRKPHILLLDEPVSALDMYHQINL
                     LEYVNAYTRANNLITIMVLHDLSLAAQFSDSVMLLSEGKFKHKAELVICWNAILFRDS
                     IMSILRFYMMETARRLSARFANV"
BASE COUNT         5939 a         3835 c         4318 g         5819 t
ORIGIN      
        1 aatatttgtt atgctttgta aataagagga aagagatcca ttttgggtag aaaatagctc
       61 attgcttgga actttaaatg gttatttcac caattcaacc acttccttcg tcaatttccc
      121 aatctcctcc cacttctgtt ccttaatcag ggatttctcc acaaaccaag agccgccgca
      181 ggcgactacg ttgggaatgg cgaggtagtc gttgatgttt tgtggcgaga tgccgccggt
      241 cggcataatc tgtaagttgc cgtaagggcc gagcagggct ttaatcattt tcacgccgcc
      301 actggcttcg gcagggaaaa atttaactgc ttgtatgcca agttcgaggg cggcttcaat
      361 cgccatcggg ttgttcacac ccggtgtaac aggcaaacct aacacttggc aatacttaac
      421 gatagtcgga ttaaaacccg gagtcacaat gcaatccgcc ccagcgtttt tggcagttaa
      481 gacttgctct ttggtcagca ctgtgcctgc tgcaatcaat acttccggat agttggcttg
      541 cactaattta attgcctctt cagctgcttc cgagcggaaa gtgatttcca ccaccggcaa
      601 accgttttcg gaaagggttt tcgccagcgg taaaatatct tctgctttat ccaaagcaat
      661 cacgggaaca actttcagtt gtcttaattt ttcaatgatt tgttcggtgg tgtaacgcat
      721 ttctagcctc attatgttgt attgcaagcg gtcgcttttg taaaaaattt tgcaaattta
      781 accgcttgtc gttgtgctat tgttggtcta aatggattgt tcaaactgcg atttcaaatg
      841 agtagtggcg gatttggcaa taatcgcccc tttgtgctga atgacgatac cggcaacggc
      901 atttccttgt tggcaacagg taacgacatc tttacccaat aagtaaccgt taaggaagcc
      961 ggcattaaag gaatcgccgg cggaagtggt atcgaccacc ttctctaccg caacagttgg
     1021 cacaaaagta cgctccccgt tttgcaacac cgttgccccc agagagcctt gtttcaccac
     1081 aatggtctga atgccatatt gagtgagacg gtcaaaggtg gcttgctcat tcacatcgcc
     1141 ccaaagcagt tgctcgtcat caaaggtcac gagagctaaa tcgactaatt gcaacagctc
     1201 ggcatagtga gcttgggcag cagccacact ttcccacagt ttcggccggt aattgctgtc
     1261 aaaggcgatt ttcacccctt gtgttttgag ctcacgcaac tgtgcaatca gcaaagtgcg
     1321 gtcgttttcc ggcaagatgg caaggctgat accgctcaag taaaccatat ctacctcgtt
     1381 tagtgccgag agtgctttgg gatagccggg gtgttgcaac aaataacggg cggcagattg
     1441 atttcgccaa tagaggaacg ttcgctcgcc ctgtttatcc aactgaatca gatacagccc
     1501 cggctggcgg tgctcgtcac gcaacacaaa atccgtgttg atattatcca cctgccacgc
     1561 cgctaacatt ccctgactga gcttatccgt gccgagagcg gaaatataac gcacctcaat
     1621 ctgttcaggc gaactcaccc gagccaaata ggtagcggtg ttgagcgaat ccccaccata
     1681 ggtttggtgc atctccccaa acggctcccc gtttaactca atcatacatt caccgagaat
     1741 ggcgagtttt ttcataggaa taccttctaa gttacacgcc gctataagca gagaatccgc
     1801 catcaacagg taatacaacg ccattgataa agctggaata atggtgatcc attaaaaata
     1861 ggattgcacc taccaattca tcggcttgtc cgaaacgtcc cataggggta ttcgtgagga
     1921 ttttattagc tctagctgtt ggcgtaccat cggcgttaaa tagtagagct ttattttgat
     1981 tactcactaa aaatcccggt gcaatagcat tacagcggat acctactttt gagaaataaa
     2041 ctgctaacca ttgtgtaaag ttactgattg cagattttgc tccagaatag gcagggattt
     2101 tagttaatgg agtaaaggca ttcatactgg atatattaat gatattagcg ccctctttac
     2161 ccaacatatc ttttgcgaaa acctgtgttg gtaatagtgt gcctaagtaa tttaaattaa
     2221 atacaaattc aatccctgct ttatctaatt caaaaaaaga ttttgtattt tccggtaagt
     2281 taatatcgtg aaattcatta tctgtcgttg cttttggatt attcccacct gcaccattaa
     2341 ttaaaatatc acaagtgcca aaatctttta gaatttcatc tcttgcctgt tttatgcttt
     2401 ctaattcaag tacattagtt tggtacgctt tcgcaatata gccttcatcg gcaatttcag
     2461 aagcaaaatt ctgtgctgct tctagattga tatcgagtag tgcaactttt gcacctgttt
     2521 ttgcaatttc ttttgcaaaa taagcacata gcacaccacc tgctccggta ataacaacaa
     2581 ctttatcttt aaaattatga ttttgggcaa tagacataat aagaactcct aagataacca
     2641 attcattggt acgataataa tttcagggaa aagtattaat aagaacagta ttgcagcata
     2701 gactagcaag aatggataga tacctttggt taatctagca ataccaattt ttgctatacc
     2761 agaaccaaca tataataccg ttccaacagg aggcgtaatt aaaccgatag ataggttaat
     2821 taccatcata ataccaaagt aagcaatatc gatgttatac gctcttagta atggtaatag
     2881 tactggtaca aaaattaata ctgctgggat taagtccatt acacagccga ctaataataa
     2941 gaaaatcata atgacgaaca ttagtacagt cgggctatcg gtaatacctt tgataaactc
     3001 aactaactcc ataggtattt gagcaacagt aactgcaaat gcagatatca ttgccgccgc
     3061 tgcaacaaac ataaccattg cagttgtttt gatagtgcct aagaaaacat cttggatttt
     3121 atctaaggtt aaccctttta agataatgct gattattgct gcataaattg ctgctacaac
     3181 tcccgcttct gttggtgtaa agatgccgcc tcttaaacct acgataataa taattggaag
     3241 tagcaatggt aagaatgctg atttaaatgc agcccaacgt tctttacctg tttttttcgg
     3301 ttcaacggtt tgttcttcgt ttcggtataa gaatttccaa actaaccata aacctaaaac
     3361 cattaaaaag cctggaacca ttcctcccat aaataatttg gtaattgatg caccggctgt
     3421 aataccatag acaatcattg gaatgcttgg tgggataact acagaaataa tacctgctgc
     3481 acagattaag cctgttgaac gtgcaacatc atattttctt gcaaccatca tcggaataag
     3541 aattgcaccg agagccgcgg tatcagcaac agcggagccg gataaacctg cgaaaattaa
     3601 gcctgaaata atcactacat agcccaatcc gcctttaata tggccgacca tgctcattgc
     3661 aaaattgata atacgttcgg aaataccgcc gtgtttcata atttcaccgg tcagcataaa
     3721 aaacgggata gccatcagcg gaaaattatt tgtacccatt acgaaattct ccgtgattaa
     3781 ttgggcatca aacatatcca ttttccatag cataaaactg gcactaagta gcatagagag
     3841 agcaacgggc actcctaaaa agagaaagag gaatagactt cctaaaaata gccataacat
     3901 atttatttct cctctttaat gaaagctagc cgaatatgtt tccataaatt tgtgaataca
     3961 atagcgaaat aggagataga tgaaataact gctgcaaaat atagaaacgc agatgaaatt
     4021 tcagttgctg gcattttttg tgtgtatgtc aataacatta actggtatgc accgtaagta
     4081 ataaatgaca gtgcaactaa gactaaaata tcagcaaaga acagtaagta catttgtact
     4141 tttgccggta gtgcagaaac aacaatatca acggtgaggt gtcccctttc ctttgcaacg
     4201 aggattattc ctagaaagat catatagaca aagcagattc tggcgaattc ctcagaccaa
     4261 gctattccgg agtcaaaaaa atatcgtaaa accgcattaa aaaagactag gataatcatt
     4321 gtagatagag caattatcgc aaggagtttg agagttctat ctaatgctgt agaaatttgc
     4381 ataaatttct ccttcttcat ttagatgggc gacctctttt atccggtcgc ctcgcttatt
     4441 gcttatttgg ctgcgtggat ttttgaaata acatctttag cccaatcata tttctgatag
     4501 aaattttgat aaagcgtttc ggatgctttt aacatatcag ctttaaattg ttcactcgga
     4561 acaatgactt ctttgccatt tttgtggaag aaatctttta catcttgttc catcttcatc
     4621 gctaattccc actctttttc ttggtagagt tttgctgcct ctaagaagat tgtctgatct
     4681 tctttagaca ttttattcca agttttcaaa ctaagttgta gtaagccagg tgagaaaata
     4741 tgattagatt caataatata tttttgcacc tcgtataaac cagaatcttt aattaacata
     4801 tatggatttt cttgcccatc aatgactttt tgttctagtg cggtaaatac ttcacttaaa
     4861 ggcatacttt gagggttaat atgcattgct tttgcccagt ccacaaacaa cgaatttagt
     4921 ggaaccctta atcgcaaacc tttaaatcca tcaaaattct caactttttt attggaagag
     4981 ataacacgga agccattcat accatacgct agtaatttaa tgccgtactt ctccattttt
     5041 tccccgattt cttgagcaat aggagattct agaactttct tagcttcggc attatcttta
     5101 aatagatatg gccactccca tacgccaaaa attggatcaa cattttgtag taataaacct
     5161 gtaatgccac cttcaatcgt gccattacgc aaaccattta caatttgatc ttctcctccc
     5221 aactggttat ttgggaaaat acggatttcg tagcgtcctt ctgttttttc ttcaatggtt
     5281 tttttgaagt attcctgcaa tgcgatattt gatggatgaa catctgaatt atagtgacca
     5341 atcttaatga tagtcttcgc aaatgccgaa ccggtgaaca tcaggctaga aattaataga
     5401 gctttagtga aagttttgag tttcatagtt attacctcgt aggtgagtta gtatttaaaa
     5461 tacagcgatg atttttaagt aatcatcagg attagctgag agttcttcga tatagtgagg
     5521 tatttcatca aatgtaatta ccttactaat gatatctttt ggttcaattc ttcttgatgc
     5581 cagaagctct aatgcttctt caaatgcccc cttgcttgtt cttgccccat aaatattaag
     5641 ttctttgaag gtgattaaat tagttggtaa tggtgtttct gttttcggcc atccggttaa
     5701 agcaatacgt ccagcaaaag aggtgtattt aagcgtattt tgtactgcga catttgctcc
     5761 tgacgcttca ataaccacct ctgccattct tccattggta attgatttaa tagcttcaag
     5821 atcgttttct tttgttggat taattgtgtg tggaatacca atagattttg cgtaatccaa
     5881 tcgcttatct aaaatgtcaa ttaaaatcgg cgtcgctcca taagctttgg caaccaatgc
     5941 agccattagc ccaattgccc ctgctccaat gatagcaaca tgttcaccag ctttgacttt
     6001 tgttctatga attgcgtgta aggaaatagt taagggttct gctaacgcta attcgtgtat
     6061 tggcatatca ggtgttttga ttatcatatg ggctggatgt ctaacaacct cttgcattgc
     6121 cccatcaata tgtaccccca atacttttag agattcgcaa caatttgttc taccaatgga
     6181 gcagggatag caatgtccac aatagatgta aggttcaatg atgacacgat ctcctacatt
     6241 aatattattt ggcatacctt taccagactc aattactgtg ccaacgattt catgccctaa
     6301 aattctagga taagtaacaa gtggattagt gcctctaaat gctccaatat cagagccaca
     6361 tatccccata ccttctactt tgattagcac atcattttca cctttaacag gataagaaac
     6421 ggtttgtata ccaactttat taggttctac aagacatact gatttgagtg gtttttccat
     6481 gattttgtcc ttttttgata aagttaatcg acattttgta gtgtcaatgg tattttatgc
     6541 acagatacta acaccaaaaa acaagtttgg cattccaatt tttgtgattt tgtgaacctg
     6601 atcacaaaaa tgaaattttg gaattccaat ttcgtgagga tttatgcaaa atagttccag
     6661 aacttacact aaaataggaa aaattctcaa agaggaaatt gctcaaggaa aatacagagt
     6721 aggagataag ttacctactg agagagatat ttctgaaaga tttgaagtga gtagaactat
     6781 cgtaagggag gcgatagtga tgctagaagt agaaaagctt attgaggtaa aaaaaggatc
     6841 gggcgtgtat gtcattagag tcccggagct ttttccagaa gattttccag aagagaaaga
     6901 taatgagcta agggatgttg ggccatttga actacttcaa gcacgacaat tattagaaag
     6961 cagtattgct gagtttgcag cacagcaggc taccaaacaa gatatacaag tacttcgtaa
     7021 catattagaa agtgagaaga aacttttgtt agagaagatg gatgactaca gtgcagataa
     7081 ggaatttcat cttgcattag ctcatatgac gggtaacgat gttctgattc aattacaaga
     7141 acagctttgg cgataccgct ttaatagtgc gatgtgggct cagctacact ccagaatttt
     7201 acagcatgat catcaccact tgtggataga ggatcatgag cgaattttaa atgcaataca
     7261 gagaaaaaat cctgcattag ctcgtaaagc aatgtggcaa catctagaaa atgttaaaac
     7321 taaattgctt gaattgtctg atgtagagga tcctaaattt gatggatatc tattcaatgt
     7381 aaaccccgtt gtagtaggta tctaaaacct aaactacaca atgaggagtt tactatggaa
     7441 caagcatggc gttggtatgg accaaacgat ccggtatctt tagatgatgt aagacaagca
     7501 ggggcaacgg ggattgtgac agcgttgcac catattccca acgggcaggt gtggtcggtt
     7561 gaggaaatta ataaacgtaa ggcattatta gctgaaaaag ggctggtttg gtcggtggta
     7621 gaaagtgtgc ctgttcacga agaaatcaaa actcaaacag gcaactatca gcaatggatt
     7681 gataactata agcaaacctt gcgtaatttg gcaagctgtg ggattgatac ggtgtgctat
     7741 aactttatgc cggtgctaga ttggactcgt accgatctgg agtatgaaat gcctgatggc
     7801 tcaaaagcat tgcgttttga ccaagtggcg tttgcggcgt ttgagttata tatcttaaaa
     7861 cgcccgggag cggaagccac ttactcatca gcagaacaag ccgaagccaa agcctatttt
     7921 gagcagatga gtgacgctga tattgcaaaa ttaaccaaaa atatcattgc cggtttgccg
     7981 gggtctgagg aaggctatac gctcgaagaa ttccaagcac agcttgaccg ctatcaaggg
     8041 ctctcggctg aaaaattccg tacccattta gcctatttct taaatgagat tgtgccggtt
     8101 gcacaagagg tgggcattcg tatggcgatt caccctgacg atccgcctcg cccgatttta
     8161 ggcttgccac gcattgtttc aaccatagaa gatatgcaat ggtttgtgga aactcaaccg
     8221 cttgcagcca atggcttcac gttctgtacc ggttcatacg gcgtattagc cgagaatgat
     8281 ttggtcaaaa tggcagagca gtttgcagat cgcatttatt ttgctcactt acgagctacc
     8341 caacgtgaag aaaatccaca aagtttccac gaagcggatc atcttgccgg tgatgtcgat
     8401 atgtttggcg tggtgaaagc attacttacc gaagagtatc gccgcaaggc aaatggcgat
     8461 caccgattaa ttccaatgcg tccggatcac ggccatcaaa tgctcgatga tctgaagaaa
     8521 aaaaccaacc caggctattc tgcgattggt cgtttaagag gattagcgga gttccgtgga
     8581 ttggagttgg cacttaagaa agtctatttt aacgattagc cttatttatt ataatgccct
     8641 ctactgtaga gggcatttta tagtttgata tgttcaaaaa atatttcggc gaaataatcc
     8701 tttttctcgt tacctttatt gctgcagcgg ggtggttttt ctctaaacac gctttagttg
     8761 gattaccgcc tattggcttt atgggagggc gttttatatt agcctctttg attcttctgc
     8821 ctttttctta ccgagagctg tatcgtttag ataaggttca agttaaatat tcggtgatta
     8881 ccggtcttac ttacggaatt tatactattt tttgggtatt ggggctggct tttagtacag
     8941 tgtttggtga aggggctttt ttggtgagcc ttgcgatgct gattgctcct ttgctctctt
     9001 ggttgatatt caaacatacg ccaccgaaga ttttttggtt agccttaccc attgcattaa
     9061 gtgggcttta ctttctttct gcggagaaag gcatctttca tttttcctta ggcagtacga
     9121 tttttctggt gtcatcagtg tttggggcgt tatattttgt gttaaataat caatacgcca
     9181 aacaagtctc attgtttcca ttaattacta tccaattggc gatagtcggt gcggtctgta
     9241 gcttgtattc ctattttatg gaaagttggc atttcccgat tctcaccgaa gtgtggctct
     9301 ggtttgccgc aagtgtattg attgcgacaa atttacgttt tttaatgcaa acactggggc
     9361 aaaaatattg ccatattggt acttctgcac tcattatgtt acttgagccg gtttggacat
     9421 tgttattgag cgtgatgtta ttgggggaac aacttagtgc gacaaaatgg ctaggttgca
     9481 gcttgatttt gatagcattg attatttatc gactccctat tctacgactc aaaaaatagg
     9541 taaaacaaaa gcaaatatgc catagtattg gaagcagtta ggcattttag agtaagtaac
     9601 aagcggtcat ttttgcaaaa aatcttgcaa aaatgaccgc tttctttctt ttatccgttc
     9661 aatctatgtt aaaattctac atttttataa gatgagagag agaaacgtgg aacagaattt
     9721 agtcgaattt ttaaccaaaa ccttagatga tttaaaggca caagatattt tagccattga
     9781 tgtgaaaggg aaatctagca ttactgatac gatgatttta gccaccggta catcgagccg
     9841 tcacgttgct tcaacggcag agcgtttaat tacggaagca aaacaggctg ggttcgaggt
     9901 atttggagat gaaggtaaag cagttgccga ttggatcgtg gtcgattttg ggaaggcaat
     9961 ggttcacttg ttgcaatccg atagccgtga gatgtaccaa ttagagaaac tttgggcgta
    10021 gcagttcaat aaggaacgac aagcggtgat ttttgcaaca ttttttgcaa attaaaccgc
    10081 ttgtaagtga aagagagatg aaaattcaat taattgcggt tggcactaaa atgccggcgt
    10141 gggtaacgac agggtttgaa gagtatcaac gccgttttcc gaaagagatg ccgtttgagt
    10201 tggtggaaat tccggcagga aaacggggca agaatgctga tactaaacgc attcttgagc
    10261 ttgaaggcaa agcaatgttg gcggcagcgg gcaaggcaaa aatcgtgact ttggatattc
    10321 cgggcaaagc gtggacaacc gagcagttag ccactcagtt agagggctgg aaaaacgatg
    10381 ggcgagatgt agcgttattg attggcggcc cggaaggatt atcaccggaa tgcaaagccg
    10441 ctgccgagca gagttggtcg ttgtcgcctt taaccttacc tcacccactg gtgcgggtgg
    10501 tggtggcgga aagtttgtat cgggcgtggt cggttaccat taatcaccct tatcatcgag
    10561 agtagtgagt cattttagat agtgttatat gtttggtaaa ttagcaaaat tcacagcttc
    10621 aaaccagcga gaaaaggtgc gagacgggca ggcagaaagc aatctgtatg cccgccgtgc
    10681 cttagttgcg tttctggggg tgttggcgtt aagtggtgtt ttattaacca acttgtatca
    10741 cttgcaagtg gtgaattatg aggactacca aacccgttca aacggtaacc gcattaaatt
    10801 gttgcctgtg ccaccggctc gaggcttaat ttatgaccgt aacggtaaag tattggcgga
    10861 aaatttaacc tatttcgggc tgtttattgt gcctgaaaag acggaaaaca ttgagcagac
    10921 tttaaccgag ttgaaggata ttgttgggct gacggacgaa gatatcgaga attatcataa
    10981 agagaaaaaa cgcagttctc gctatacccc aattatgctc aaaggcaatt tgaatgaggc
    11041 tcagatggct cgttttgcgg tgaaccaata ccgttttcca agtttagatg tgcaggcgta
    11101 ttataagcgg aattatcctt acggcgagct tttaacccat attatcggtt atgtggcgaa
    11161 aattaacgaa aacgataaga aaaagctgca agaagccggg aaattcggca attatgccgg
    11221 ttcgcacgat atggggaaat tggggattga aaaattctat gaagatcagc tccacggtgt
    11281 caccggtttt gaagaggtag aaattaataa ccgagggaaa gtaatccgta aattgcgtga
    11341 ccaagcaggg gttgccggta gcagtattcg cttgagtatt gatgtggaat tacagcaata
    11401 tgtgatgtcg ttaattgcta agcataaagg ggcggtggtg gtgcttgacc ctcgtgatag
    11461 cagtatttta gcgatggtct caaacccaag ttatgacaat aatttatttg tgggcggtat
    11521 ttcagggcag gattataaag cattattgga cgatccaacc cgaccacttt atagccgtac
    11581 tacacaaggc acttatccac cggcttcaac tattaagcca tttatggcgg tggcaggttt
    11641 ggaagaggga atgattaccc cttctaccac catttcagac cccggctatt ggattttgcc
    11701 cggcactaca caacgttatc gagattggaa acgtagcgga cacggtgcaa ctaatgtgaa
    11761 taaagcaatt accgaatcgt ctgatacctt tttctatcaa ttagcctata aaatggggat
    11821 tgataaaatg tcggattgga tgaaaaaatt cggtttcgga gtgaaaaccg gtatcgatat
    11881 ttttgaggaa tccgcagggg taatgccaac ccgtgaatgg aaacaaaaac gctataaaaa
    11941 accttgggtg cagggcgata ctattccggt tgggattggg cagggctact ggatttcgac
    12001 cccgttacag ttggcgaaag ccacggcggt gttaatcaac aacgggcggg tgaatacacc
    12061 gcatttaatg cttgaagtgc aaagcagtaa ttcggttacg ccgtatcaag acccattgtt
    12121 gtatgaagat attaaaggcg tgccggatgt ctattggaat ttagcaaaac agggaatgta
    12181 taacgtaaac cacgccgcaa acggtacggc acgaaaagtg tttgccggtg cattttatca
    12241 ttcagcaggg aaaaccggta cggctcaggt gtttaactta aacggtaaaa attacgataa
    12301 aaatgcgatt aaaaaagagt tgcacgacca cgcttggttt atcggctatg ctccttatga
    12361 acaacctaaa atagtggtgg cattaatttt agaaaatgca ggcggtggtg gtagtgccgc
    12421 ggctcctgtt gctcgtcaga ttatggatta tgctttgaga aaaggcattg gtgaacagcc
    12481 ggattcgcaa aattctgagc aaaataaacc gcttgtcaca gaggaacatc atgaatagtg
    12541 gctttaaaaa acttttctgg aaaatttttt cactcgatct ccttttatta tcaggattat
    12601 tagctattac cggttatggt ttattagtac tatatagcgc aagcggtgca aatgagcgga
    12661 tgtttaccag tagactgatt caagtttcgc tagggcttgg gctaatgttg ataatggcaa
    12721 tggtacctcc tcgcttttat caaaaagttt cgccttatct gtatattttc tgtctgatat
    12781 tattgatttt ggtggatttg gtcggcgaaa ccagtaaagg agcgcaacgt tggttgaatt
    12841 taggatttgt tcgctttcag ccttctgaga ttgccaagct cgctgtgcca ctgatggtag
    12901 ccacttattt aggtaagcgg ccgcttcctc cgagttttaa agatactttt atcgccttag
    12961 ccattattat tgtgccaacc ttattggtgg caattcagcc cgatttggga acatctattt
    13021 tagtgtgttc tgccggtatt tttgttttat ttttggcagg gctaagttgg aaattaattg
    13081 gcgcaggtgt ggtgttttta gccggtttta tcccgataat gtggtttttc ttaatgcacg
    13141 attatcaaaa aacccgggtg atgaccttaa ttgatcctaa taaagacccg ttgggtgccg
    13201 gctatcatat tattcaatcc aaaattgcga taggctctgg tggcattaat ggaaaaggct
    13261 ggatggaagg aacgcaatcc cagcttgaat ttttacctga accgcatacc gattttattt
    13321 ttgcagtgtt aagcgaagag catggtatga taggtgtgct gattttatta gcgatttatt
    13381 tgtttattat tgcccgaggt ttagtgattg gcacaaaatc ggattctgct ttcgggcgta
    13441 tattatcagg tggtacagcc cttctatttt ttgtttacgt ttttgtaaat attggtatgg
    13501 tgagtggtat tttacccgta gtcggtgtac cattaccgct tttcagttac ggcggaacct
    13561 cctatgtgac gctgatggcg gcatttggtt tgatgatgtc aacctatgtt caccgtaagc
    13621 gtgtaggtag taataatcct tatgataaac tgaaataaat taaacttttg cttttttgcg
    13681 gtatcaaaaa gcagtgaaac gatcatcgtt acaaacaata acgacatcca catagaggaa
    13741 aaaacttata tgagattagg taaaattgta accctgttgt tagctggatt tctgacattt
    13801 agttcattaa attctttggc tgcgacaaag aatacaaaag ctaaatcgag tattttagcc
    13861 aagaagcaag caacttctaa agcaataaaa aaagtaggta tttctaaagt taagaaaaaa
    13921 gaagtagtgg ctaaagctac aaaaaagaaa acaatttcta ctgttacaac taagccgatt
    13981 aaatctacaa aaaagctggc tcgcaaggtt gtcaagaaaa cggtaaccgc taagaaaaaa
    14041 ttggtaaaaa agcagcataa gccactggtc aaaaaacatt tccagactgg tgttgccagc
    14101 tattatgcaa attactttaa tggtcgccga accgctaatg gggagacttt caataacgca
    14161 aaaatgacgg ctgcacatcg aactttacca tttggtactt taattgaagt gacgaattta
    14221 cgaaatggtc gttctgtggt ggtgcgtgta aatgatcgcg gaccttatgc tcacgcacgg
    14281 gtcttggatt tatcatcagc cgcagcgaaa aaaatcggta tgcaccattc ggggacggca
    14341 agagtgaaaa ttgcgattgt tgataagtca aaattgggat cgactaatca gttttatgta
    14401 atgaattaat ttaagaggga atatgaaaaa aacattagtg aaagcgatga gcgtggtagg
    14461 ttttgcggtt tcaagcattg cctatgcgga tttaaacact aacttcaatt tatcggcacc
    14521 ccagatcaac gcacaaacct atattttgat ggattacaac tccggtgaag ttttagtgag
    14581 cctaaatccg gatcaacgtc aatatcctgc atcattgacc aaaatgatga ctagctacgt
    14641 agttggtgaa gccctaaaat cgggaaaagt gcaaaacagt gatatggtga tagtcaccga
    14701 aaattcgtgg gcgcaaaaat tccccggctc ttcattaatg tttttagatt taaacagcaa
    14761 agtttcagta ggtgagttga tgaaagggct gattatcgtc tcgggtaatg atgcctctgt
    14821 ggcgcttgct gaacatgttt caggctcaca agcggcgttc attaatgaaa tgaacaaata
    14881 tgcccaacag tttggcttaa agaatactca ctttaccact gttcacggtt tagatgaccc
    14941 tgagcaatat tcttctgctc gtgatatggc gattattggt tcgcatatta ttcgtgatca
    15001 gccggaagag tataaaattt atgcggaaaa agagttccaa tataacatca aaaaaccaca
    15061 accaaaccgc aacggattat tgtgggataa aaccattcaa gttgatggta tgaaaacagg
    15121 gcatactgat aaagccggct ataacttagt cgcatcagca attaacccga atacacgttt
    15181 aatttctgta gtgatgggcg tgccaactta taaagggcgt gaagtggaaa gtaagaaatt
    15241 actgcaatgg ggctttgcga actttgaaac cattaaatct attccggcag ctcaatcggt
    15301 ggcagagcaa agtgtctatt acggtgaagt caataaagta caattaggct cggtgcaaga
    15361 tagctttgtg actatcccga aaggtcgctc ggcagattta aaagcccgtt atgagttaga
    15421 gaagaaaaac ctcgaagctc ctttagcaaa agggcaggta gtgggtaaaa tgatctacca
    15481 acttgacggc aaagatgttg caagcactaa cttacaagtc ttacaagatg taccggaagc
    15541 cggtattttc ggcaaagcgt gggattggat tgcccttact gtgaagagct tgttcgatta
    15601 atcttgttat ttgccttttt atccccatct agggagcaat gcaagcggtg tgattttgca
    15661 aaaaatttgc aaaatttcac cgcttaccgt tttagatatg aatgtataaa aagtgtagtg
    15721 gcgaaaaatt tttcgcccct cgaagaaaga atagaagaag gatcaaaaat gtctcaaccc
    15781 aaagcgataa acttacaaga tttacctcaa gccaaattaa aagatctgct agagtttccg
    15841 tgccatttca cgttcaaagt ggtgggagca aaccgagaag atttggttga tgatgtggta
    15901 gtggtcacgc aaaaatatgc caaaggcgat tacaatccac gtcagcaaaa aagctcaaaa
    15961 ggtacctata attccgtttc gattgatatt gtggcggaaa atattgagca agtagaaact
    16021 ctctacacgg aacttgccaa aattaatggc gtaagaatgg tattataatg cgaggggcga
    16081 atgacattcg ccctcaattt ttcaataaag cgatgttgga aaatagaaaa tgaaattaat
    16141 aattcgccaa ctaggcattc agccttatga agaaatttgg caccaaatgc aatctttcac
    16201 agatagccgt gatgggaata ccgatgatga gatctggctg gttcagcacc cggctgtgtt
    16261 tacgcaagga tcggcaggca aaccggagca tttgttaaat ccaaccaata ttccggtggt
    16321 gcaaagcgac cgtggcggtc aaattactta ccacggcgag gggcagcaaa ttatgtatgt
    16381 gctgattgat atcaaacggc tgaaatcctt gggtaaagaa gtgtcggttc gagatttagt
    16441 gactgccctg gagcaaaccg tggtacaaac gttggcagaa tatggcatag aaagttatcc
    16501 aaaagccgat gcacccgggg tgtatgtgga cggcaagaaa atctgctcac ttggtttacg
    16561 aattcgaaaa ggttgctctt tccacggttt ggcattaaat atcaatatgg acttaacgcc
    16621 ttttcaaaac atcaatccgt gcggttatgc agggctggaa atgtgccaat taagtgaact
    16681 ggttcatcgc cctgatttgc gttgcgaaga ggttgctcca aaattagtgg ctcatttcag
    16741 cacaatttta ggctataata accaacaaat tattaacaat taggataaaa cacagtaatg
    16801 gctacatcga cagctcaaac gacggcaact gctacagtga aaaaaatgag ccctttcaaa
    16861 atggaaaaag gggtgaaata tcgtgatgcc gccaaaacct ctgtgattca ggtgcgtaat
    16921 atcgacccgg atcaagaact cttaaaaaaa ccggagtgga tgaaaatcaa actgccggca
    16981 aattcggcaa aaattgatag cattaaaaac ggtatgcgtc gccacggctt gcactcggtg
    17041 tgcgaggaag cctcttgccc gaatttacac gaatgtttta accacggtac tgcaaccttt
    17101 atgattatgg gggcaatctg tacccgtcgt tgcccgttct gtgatgtggc acacggcaaa
    17161 ccgcttccgc ttgacccgga cgaacctcgc aaagtggcag aaacggtgca agatatgaaa
    17221 ctcaaatatg tggtgattac ctcagtggat cgtgatgatt tgcccgaccg tggtgcggct
    17281 catttctctg cgaccgtgcg tgaaatcaaa gccttaaatc cgcattgtaa ggttgaaatt
    17341 ttagtgcctg atttccgtgg acgtgtggag caagcggtgg caattctcaa agaaaatcca
    17401 cctgatgtct ttaaccacaa cctagaaaat gtgccacgtc tctatcgtga agttcgtccg
    17461 ggagcggatt acaaatggtc gttggaatta ttgaaaatct tcaagcaaga gttcccgcat
    17521 attccgacca aatccggctt aatggtaggc ttaggtgaaa ccaacgaaga aatcttggaa
    17581 gtaatgcaag atttacgaga ccacggcgtg acgatgctca ccatcgggca atacttacaa
    17641 ccaagccgcc accacttaaa agtggaacgt tatgtgccac cggcagagtt tgatatgttc
    17701 cgtgaggaag ctgaaaaaat gggctttgaa cacgcagcct gcggaccgtt cgtgcgttct
    17761 tcttaccacg cggatttaca agcgaaaggc gaattggtga aataaaatcg ataagggcga
    17821 atattatttg ccctttgttt ttgtggtttg caaagtttta gcaaaattaa accgcttgta
    17881 atctcttcta atttactctt ctatagataa tttcgttgtt gcgaattatt ttcattgact
    17941 atttgttata gaaagttaca attcaacttt ccatttcttt ttggagttcc aatgaaaaaa
    18001 ttactattaa acagcgtatt tgctgccaca ttgcttgctt ttggtgcaac tgccaatgcc
    18061 gaaattaaaa ccatcactga tgtattaggg cgtgaggtca aagttgatgt gcctgctaaa
    18121 cgtgttgcac tgactttcta ttaccctgac tatattgcgg taaccggtgt tgaaaatttc
    18181 gataaggtag tagggatttc acgagagttt tgggaaaagt tcaacccagg cagttgggca
    18241 ttatttgcag aaaaaatgcc aaatctaaaa aacattgccg atcttggcta tgtgaatagt
    18301 ggtacttttt caacagaaaa aaccatcgca ttaaaaccag atgtgttagt gctacctgaa
    18361 attcaatatc aagcgttagc cagtgaaatt tcacgcattg agcaagctgg cattcctgtt
    18421 gtagtagatt tcaacaagca aactattgaa aaccatacaa aaagcgtgag agttttcggt
    18481 cagcttacag gcactgaaga gagagcggag aaaattgcca aagagtatga agagggcatt
    18541 gctgatattc agagctgtat tgataatgca aaagtaagta agccgaaaat ctatgctgaa
    18601 tttggtaata aaggcccgaa agagcatagt tttacctttg gtaaaaatat gtggggagcg
    18661 attgccgaaa cggtgcgagg cgataacatt agtgccccgt ttgtagaaaa ctgggggcag
    18721 attaaccctg agcaggtgtt agtttctaaa cctgatgtga ttatgatttc aggtacggaa
    18781 ctaggcaacg acactaaccc tgagattatg tcgatgggga ttaatattga agaagccgat
    18841 gctcaaaaac gcttaaaagg ctttattgag cgtacaggtt ggaaagagtt acctgcggta
    18901 aaatcagggc gtgtttatgg tttatatcat acagcttctc gctcaatttc agatttagcg
    18961 agtgctcaat ttatggcaaa agcactttat cctgaattgt ttaaagatat cgatcctgaa
    19021 aaaacgtatt tggatttcca caacaactac ttaccaatta cgccaaaagg cacattcttt
    19081 atgcaactga aataaaaata acaagcggtc attttgcaga tttattttgc aaaatgaccg
    19141 cttgtattcg cttttactat ttgcggttca aacagcaatc aatatttaaa catttgcgaa
    19201 gcgggcggat aatcggcgag ccgtttccat catataaaat ctcaatattg acattataga
    19261 gtctctgaat aatatcgcat tccaacatat cacaagctct gccttgtgct tgaatttccc
    19321 ctcgcttaat agcatcacac tatccgaaaa ttgagccgca aggcttaaat cgtgcagcac
    19381 cataattgta attaggttat tcgctcgagt gtaggcattc acatattcaa gtaagttgat
    19441 ttgatgatac atatccaacg cactgacagg ctcatctagc agcagaatgt gtggtttacg
    19501 tagcaatact tgtgcgaaca ttaccatttg ccgttgcccg ccacttagcc gcataatatc
    19561 ttgatgagct agatgtgaaa taccgagttt atccataata tcaacggctt cattgagtaa
    19621 ttcatcgcta atatacatat tcaggctatc aagttgccct aataaaataa cctctaaggc
    19681 actgagtgag gcctctacct gtgtgtcttg tggcatatag ccaatttctt tacgccaact
    19741 atgcaagtgg cttgaggtta atttattacc gtcaaaatca attgtgcctt gatgagcaat
    19801 ttccccaaat agagttttaa ggagagaaga tttacccgca ccatttgggc caagtaaagt
    19861 atagatcttg ccttgttcaa aatgtagatt gattttatca gccaccactg a
//
LOCUS       DANLZQ010000034        19363 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.034, whole genome shotgun sequence.
ACCESSION   DANLZQ010000034 DANLZQ010000000
VERSION     DANLZQ010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 19363)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19363)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19363
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.034"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(52..1092)
                     /locus_tag="PXE50_001137"
     CDS             complement(52..1092)
                     /locus_tag="PXE50_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDL5622062.1"
                     /translation="MQTTLSPQQIAKKHRTIEKKRSFLLLFFLLICLLSLIFDIMTGP
                     SLLPFNEVWKALFQLGEIEETTKVIVYELRLPMAIMALVVGAALGVGGAEIQTLLNNP
                     MASPYTLGLAAAAGFGASIVIAFGGFGLPTEISVPVGAFVMTLFSSAILFAFSSLGRF
                     SSAILVLVGIALLFLFQSLLSLVQFISAPEVSQQILFWLFGNLTKATWQTISIAFGVT
                     TVCILLLFKDAWKLTALRLGEARALSLGINLTWLRMKTLLIVSVMTATCISFVGIIGF
                     IGLVAPHIARMLLGEDQRFFLPGSMLVGAAFLSMSSVLSKSLVPGALFPVGIITALVG
                     VQFFFWIVLAKR"
     gene            complement(1181..1771)
                     /locus_tag="PXE50_001138"
     CDS             complement(1181..1771)
                     /locus_tag="PXE50_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein phosphodiesterase"
                     /protein_id="HDL5622063.1"
                     /translation="MNFLTHSLISLEIDTQTKQQTLYGNFAGDFYKGLIPHLNLADNL
                     KSGVVLHRSIDKISDRPDSLTTQLLQGTFGRYKGIVSDIMIDHFLAKHFQRLFAKDLN
                     EVQAQIFQQIEQQRTIFPEQFVPMFNWLQSRKALTHYADLDFLEQVFLGMSSRVKKGE
                     ILRNAVTEIWQNYTLLEEAAIQEFFTVKDRATRELS"
     gene            complement(1772..3145)
                     /gene="modF"
                     /locus_tag="PXE50_001139"
     CDS             complement(1772..3145)
                     /gene="modF"
                     /locus_tag="PXE50_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter ATP-binding protein
                     ModF"
                     /protein_id="HDL5622064.1"
                     /translation="MVVDGNGSGKTTFSLALQGKISLYSGDYGNSFQHIQLLSFEQQQ
                     KMLEQIFKDRNNDSVSPDDFGLTARQVILNGSPKEALCEEYAHKLHIQHLLERPFMHL
                     STGESRKVLFCQMLVSEPDLFILDEPFEGLDQQSVQYWQQLIAELQSKMALVLIVNRF
                     NDIPDAANHIELLDNLSLILQGERAEIEQQAVYSQLKFAEENVNVPLPDSAAPLLSLP
                     ENINPFELENVNIQYGEKKILDNLSWTVQPKQHWWIKGPNGAGKSTLLSIITGDHPQS
                     YANKVRLFGKQRGSGETIWDIKKNIGYVSSQLHMDYRVNCSAMEVILSGFFDSIGVYQ
                     QVPNALQLKAMEWLERLNLSNVAKKPFRSLSWGQQRLLLITRAMVKHPSILILDEPLQ
                     GLDGINRKLVKQFIEQLVTNSQTQLLFVSHQDSDAPNCITHLFEFVPKGETNEFGFEY
                     HQTALGA"
     gene            complement(3263..4216)
                     /gene="fmt"
                     /locus_tag="PXE50_001140"
     CDS             complement(3263..4216)
                     /gene="fmt"
                     /locus_tag="PXE50_001140"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HDL5622065.1"
                     /translation="MSKLNIIFAGTPDFAAQHLQALLDSEHNVIAVYTQPDKPAGRGK
                     KLQASPVKQLAEAHNIPVYQPKSLRKEEAQAELKALNADVMVVVAYGLILPEAVLNAP
                     KYGCLNVHGSLLPRWRGAAPIQRSIWAGDTETGVTIMLMDVGLDTGDMLHKVTTPIEP
                     NETSASLYAKLAELAPLALLEVLNGLANHTFKAEKQDEALSNYAEKLSKEEAKLDWQL
                     PAVQLERNIRAFNPWPFSFLTLTVDGVEQSIKIHQATVLPHQEKAAGTVINVDKTGIQ
                     IATQQGVLNITQLQPAGKKPMSVQDFLNGRADWFVSGTQLS"
     gene            4331..4942
                     /locus_tag="PXE50_001141"
     CDS             4331..4942
                     /locus_tag="PXE50_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HDL5622066.1"
                     /translation="MEFFIPKADTIFEEEIKKSRFITYLRHTEGMEQAKAFWQELKIQ
                     HPHARHWCWATVAGLPNDSQQYGFSDDGEPSGTAGKPMLNYLLGSGLGEITAVVVRYY
                     GGIQLGTGGLVKAYGNGVQQALLQLERIRKVLRKNYRLQCEYEQFNTISHLISEKDIV
                     IVEQLFSDKVDLLLAFNPSEVEAFADELTQRFSGKLALIKEEI"
     gene            4946..6430
                     /locus_tag="PXE50_001142"
     CDS             4946..6430
                     /locus_tag="PXE50_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter"
                     /protein_id="HDL5622067.1"
                     /translation="MQFFSIIRIVGILVMCFSFTMLVPATVALIYGDGGGRAFLEAFA
                     LNFMVGTLLWWLCRDNKNELRSREGFLIVVLFWVVLGLLGAVPFIILENPDLNVAESI
                     FESFSGLTTTGATVITGLDSLPKAILFYRQFLQWLGGMGIIVLAVAIIPLLGIGGMQL
                     YRAEMPGPLKEQKMRPRIAETAKALWLIYLSLTILCAVAFWLAGMTVFDAISHSFSTV
                     SIGGFSTHDASIGYFNNAAISYITVFFLLLSACNFALHFAVIDRIRDAQSRKKGGILS
                     RLYWGDYEFRFFLMVQLGLFLVCTLVLVGYGYFDNTSVTIEQALFQSVSISTTAGFTT
                     NDFSQWSSFLPTLLVLSSFIGGCAGSTGGGLKVIRVLLLYLQSKREIHRYIHPNVIQP
                     IKLGNHVLSERVVDGIWAFFSAYFFVFVICWLATIACGMETFDALNAVIASLNNLGPA
                     LGSVSSNFTQVPDSAKLVLTFAMVCGRLEVFTLLVILSPVFWKD"
     gene            6431..6958
                     /gene="hemG"
                     /locus_tag="PXE50_001143"
     CDS             6431..6958
                     /gene="hemG"
                     /locus_tag="PXE50_001143"
                     /EC_number="1.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone-dependent protoporphyrinogen IX
                     dehydrogenase"
                     /protein_id="HDL5622068.1"
                     /translation="MKTLILYFTTDGQTKKIAERLADVITHEVELISLKDQAVDFAEK
                     IANADQIVIGASIRYGHFNPLVYQFVEQHYPALNAKKTAFYGVNLTARKDNRNTPETN
                     TYVRKFLAKVKWKPTHIEVIAGALLYLRYKPFDRLMIRFIMKITKGETDTSKEYEYTD
                     WQQVENFGKLLANQL"
     gene            7090..7485
                     /gene="mscL"
                     /locus_tag="PXE50_001144"
     CDS             7090..7485
                     /gene="mscL"
                     /locus_tag="PXE50_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="large-conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HDL5622069.1"
                     /translation="MSILKEFREFAVKGNVVDMAVGVIIGGAFGKIVSSLVSDVVMPP
                     IGWLIGGVDFKDLAIEIAPAKEGAEAVMLKYGAFIQNVFDFLIIALAVFGMVKVINSL
                     KKAPVVEEAPAEPTAEEKLLTEIRDLLKK"
     gene            complement(7598..7861)
                     /gene="rpsT"
                     /locus_tag="PXE50_001145"
     CDS             complement(7598..7861)
                     /gene="rpsT"
                     /locus_tag="PXE50_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HDL5622070.1"
                     /translation="MANIKSAKKRAVQSEKRRQHNASQRSMMRTFIKKVYAAVAAGDK
                     AAAQTAFVEMQKVVDRMASKNLIHANKAANHKSKLAAQIKKLA"
     gene            8125..9699
                     /gene="murJ"
                     /locus_tag="PXE50_001146"
     CDS             8125..9699
                     /gene="murJ"
                     /locus_tag="PXE50_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HDL5622071.1"
                     /translation="MSKKLLRSGMIVSFMTLISRILGLIRDIVVATILGTGVSADIFL
                     FANRIPNFLRRLFAEGAFSKAFVPVLAEYNADNDPNKTREFIAKVSGTLGGLVTVVTL
                     VAMIASPVVAALFGTGWFLDWLYDGPNAEKFTQASFLLKITFPYLWFITFVALSGAVL
                     NTIGKFGVMAFSPVLLNVAIIAVALWGRDYFDSPDIALAWGVFLGGLLQFLFQIPFMK
                     KEGLLVKPKWAWKDEGVTKVRKLMIPALFGVSVTQLNLLLNQVIASFLITGSISWMYY
                     ADRLIEFPLGLFGIAISTVVLPSLSRIAKNKELTEIQRGEHFQNTMDWGVRMVLLLGI
                     PAMIGMAVLAQPIIMTMFMRGKFGFEDVLATSYPLWVMCLGLNSYMLISVLANGFYAN
                     QNTKTPVKVGIIAALSNICFGLAFAPFLGYIGLALASACSALVNVSLLYVNLSKNGYY
                     KVSHKTVLFVLKLFIAACVMGALVAYFTPEIELWALMTMWQKVYWLIWLMILAGGSYF
                     ASILVLGIRKKDFRSA"
     gene            9701..10168
                     /locus_tag="PXE50_001147"
     CDS             9701..10168
                     /locus_tag="PXE50_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HDL5622072.1"
                     /translation="MKSLKLKIPPPAWFLLCAALMWLVAQYVPVSLPNYQHTAIFFSG
                     LAVAIIGGAVAVSALWVIHQAKTTYSPFRPQHTAKLVTWGIYRKSRNPMYLSLLLGLI
                     AWALWLGAMLAWLVLPLFVWLITYFQIKPEEQILAQKFGTHYAKYCNQVRRWL"
     gene            complement(10233..12242)
                     /locus_tag="PXE50_001148"
     CDS             complement(10233..12242)
                     /locus_tag="PXE50_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HDL5622073.1"
                     /translation="MDLIKKLNTGSTFRVPIFLPSLLFVSFVAVFCIIFPQQAQTSLD
                     TIKNSLFQHFSWFYIFAGSIFFLFLIFLSFSRLGDIKLGADTDEPEFGFGSWIAMLFA
                     AGMGIGLMYFGVAEPILHYLKPVQQNLTEPERMKEAMMTTFYHWGIHAWAIYGVIALA
                     LAYFGFRYKLALTIRSGFYPLLKHRISGFWGHLIDIIALCSTIFGLTTTLGFGVMQVS
                     AGFNNLGLIEQSNFTVLAIIVTVAMALAVLSAVSGVGKGVKILSEINLTLAGLLLIFV
                     IITGPTLLLFSSFTENLGYYFSSLLEMSFRTFAYEPEHQGWLSGWTVLYWAWWASWAP
                     FVGLFIAKISKGRTIREFILGVLFVPSLFNILWMTSFGSSAIWFDQQTAGALAEVSGN
                     TEQLLFTFFEQLPFGSIASFVAVIVISIFFITSADSGIFVLNSIASQGEENAPKWQSV
                     LWGALLAILALSLLYSGGLASLQTMTLIIALPFTFIMLILCIGLWKGLMVDNQYFNKK
                     FSQGSQHWAGKDWKQRLEKIINPSNKQDVRHFFIKVARPAFLELIEEFESYGLIAKMN
                     FTNEQNPKLEFEVVKENLRNFIYGIESVPRELSDLVVGDDNLPNIEQNTIYEPITYFL
                     DGRKGYDVQYMTKEELIADVLQQYERFINLAMDNSHDLMTADFNH"
     gene            12434..12969
                     /locus_tag="PXE50_001149"
                     /pseudo
     CDS             12434..12969
                     /locus_tag="PXE50_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251153.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            12997..13608
                     /locus_tag="PXE50_001150"
     CDS             12997..13608
                     /locus_tag="PXE50_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5622074.1"
                     /translation="MKYEAKPLIISPNHIQQRLHGKLLARALLIIALLMLAKFIYIAS
                     LSNYFTFYLMEKFQLNIAMAQLSLFTFLGAVALGAFVGGPIGDKIGRNAVIWFSFLGM
                     APFALLLPHADLFWTIVCAIFAGFIMSSAFSAMVVYAQEAVPGRVGLISGTMFGLMFG
                     IGGLSAAVLGFFADEYGLESIFKACAYLPLLGFAALGLPKRNI"
     gene            complement(13619..14509)
                     /gene="rarD"
                     /locus_tag="PXE50_001151"
     CDS             complement(13619..14509)
                     /gene="rarD"
                     /locus_tag="PXE50_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HDL5622075.1"
                     /translation="MNISGKLQGWHYALLCYLTWGTFPIYWYPINQSGMPAEQILAQR
                     VLWSALFAVFLLLIFQQGRAVINAFKQPKVLGLFVLSSFMIGVNWLVYLWAIVNEHIL
                     DASLGYFINPIFNVFVGRLILKEQLNKAQLLALLFAISGILWLAIPAGQIPWVALILA
                     ASFCIYGLIRKLAPMEPLSGLALETLLMSPFAITYLCFCYHQNILVFSELNPLQMAVL
                     LCSGIATTLPLLWFAMGARRISMSLLGMLQYISPTLQFLCGVLIFNETLSAERAVGYI
                     LVWIGVGVFLLGMKKAGVKR"
     gene            complement(14591..15574)
                     /gene="epmA"
                     /locus_tag="PXE50_001152"
     CDS             complement(14591..15574)
                     /gene="epmA"
                     /locus_tag="PXE50_001152"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P--(R)-beta-lysine ligase"
                     /protein_id="HDL5622076.1"
                     /translation="MNNLQLDNIDWQPTASIPHLIQRSKIITEIRKFFTDRGLLEVET
                     PILSEFSVTDVHLSTFNTQFQSPFSPEAKTLHLMTSPEYHMKRLLAAGSGPIFQLCKV
                     FRNEEAGKRHNPEFTMLEWYRPHFDMYRLINEVDDLLQQILDCEPAESFSYQFVFQTY
                     VGLDPLSATKAQLVEKARKHGLQCDDDEQRDTLLQFLFSEVVEANIGQERPTAVYHFP
                     STQAALAQISSEDHRVAERFEFYYKGLELCNGFHELDDADEQIHRFEQDNLQREKMGL
                     EPQQLDVRFLAALKAGFPNCSGVALGVDRLLMLAMDAEKIEEVISFGIEKA"
     gene            15907..17709
                     /gene="frdA"
                     /locus_tag="PXE50_001153"
     CDS             15907..17709
                     /gene="frdA"
                     /locus_tag="PXE50_001153"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010944100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase (quinol) flavoprotein
                     subunit"
                     /protein_id="HDL5622077.1"
                     /translation="MQSVNFDVAIIGAGGGGLRAAIAAAEANPNLKIALISKVYPMRS
                     HTVAAEGGSAAVIKDTDSFDNHFNDTVGGGDWLCEQDIVEYFVEHSPIEMTQLERWGC
                     PWSRREDGEVNVRRFGGMKIERTWFAADKTGFHILHTLFQTSIKYPNIVRFDEHFVLD
                     ILTDNGEARGCVAMNMMEGTLVQINANAVVIATGGGCRTYRFNTNGGIVTGDGLSMAY
                     RHGVALRDMEFVQYHPTGLPNTGILMTEGCRGEGGILVNKDGYRYLQDYGLGPETPIG
                     KPENKYMELGPRDKVSQAFWQEWRKGNTLKTAKGVDVVHLDLRHLGEKYLLERLPFIC
                     ELAKAYEGVDPAKAPIPVRPVVHYTMGGIEVDMNAETSIKGLFAVGECASSGLHGANR
                     LGSNSLAELVVFGKVAGENAARRALEVTARNQPQIDAQAKDVVARLHALANQEGNESW
                     SDIRNQMGDAMEEGCGIYRTQESMEATVNKIQELKERYKNISVKDKSSVFNTDLLYKI
                     ELGFILDVAQSIACSAVERKESRGAHQRLDYVERDDVNYLKHTQAYYNAEGTPTIKYS
                     DVKITKSQPAKRVYGAEAEAQEKVKKAAEAQAQQ"
     gene            17725..18456
                     /locus_tag="PXE50_001154"
     CDS             17725..18456
                     /locus_tag="PXE50_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005639269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HDL5622078.1"
                     /translation="MANLDKMTIEVLRYNPESDSEPHLDRYEVPYDSQTSLLDALGFI
                     KDELEPELSYRWSCRMAICGSCGMMVNGKPKLACKTFLRDYSGFMRIEPLANFPIERD
                     LVVDLSHFIDSIEAIKPYIIDNKAPEGQRTKQTPAQLEKYRQFSMCINCGLCYAACPQ
                     FGLNPEFIGPAAITLAHRYNLDNRDNGREERMKLLSSKNGVWSCTFVGYCSEVCPKHV
                     GPASAVNQGKLESAKDYVISMIKPR"
     gene            18466..18858
                     /gene="frdC"
                     /locus_tag="PXE50_001155"
     CDS             18466..18858
                     /gene="frdC"
                     /locus_tag="PXE50_001155"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdC"
                     /protein_id="HDL5622079.1"
                     /translation="MSATKRRPYVRGMKASWWKKLDFYKMYMVREATCLPTVWFCIVL
                     FYGAVALSKGTFTTDFVDFLQNPLVVILNIISLAAMLYHAATLFVMTPAVMSVMVKGK
                     HLPVSVGRNILWAATGVISVIALILVYI"
     gene            18872..19219
                     /gene="frdD"
                     /locus_tag="PXE50_001156"
     CDS             18872..19219
                     /gene="frdD"
                     /locus_tag="PXE50_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdD"
                     /protein_id="HDL5622080.1"
                     /translation="MSLDQNPKRSNEPPVWLLFSAGGMVSALFFPVVIFIIGLLLPFG
                     LVSPDNIISFAHTWIGKLAIMVLAIFPMWAGMHRIHHGLHDLKVHTPAGNVIFYGLSI
                     LYTILVIIAVVQI"
BASE COUNT         5483 a         3809 c         4333 g         5738 t
ORIGIN      
        1 taagtttcca cgcttaatag ttacatcgtt taagttgagc atagaaaatc cttatcgttt
       61 cgccaataca atccagaaaa agaactgcac accgactaat gccgtaataa taccgaccgg
      121 aaataatgcg cccggcacaa ggctttttga tagcacggat gacatcgata aaaatgccgc
      181 acccactaac attgaaccgg gcaggaaaaa gcgttggtct tcgcctagca acattcgggc
      241 aatatgcggg gcaactaagc caataaagcc gataatgcct acaaagctaa tgcaggtggc
      301 cgtcattaca gacacaatca gcaatgtttt cattcgtaac caagttaagt taatgcctaa
      361 gctcaatgct cgagcttcgc ccaaacgcaa ggcagttaat ttccacgcat ctttgaataa
      421 taataaaata cagactgtag ttacgccaaa ggcaattgag atagtctgcc aagtagcttt
      481 agttaaatta ccgaatagcc aaaacagaat ttgttgggat acctcaggtg cagaaataaa
      541 ttgcaccaat gacagtaaag actgaaataa aaacaataag gcaattccta ccagcactaa
      601 tattgccgag ctaaaacgtc ctaaagagga aaaggcaaat aaaatggcgg aagaaaatag
      661 tgtcatcaca aaagccccga caggtacaga aatttcggtg ggtaaaccaa atccaccaaa
      721 ggcaatcaca atcgaagcac caaagccggc tgcagctgct aaacccaatg tataagggct
      781 tgccattgga ttattaagca aagtttgaat ttcagctccg ccaacaccaa gtgctgctcc
      841 aaccaccaat gccattattg ccattggtaa gcgtagctca tagacaatca ctttggtggt
      901 ttcttcaatt tcgcctaatt ggaataaggc tttccaaact tcattaaacg gaagcaggga
      961 agggcctgtc ataatatcga aaatgaggct gagtaaacaa atgagtaaga aaaagagtaa
     1021 taaaaaactg cgtttctttt caatagttcg gtgcttttta gctatttgtt ggggagagag
     1081 cgttgtttgc ataaaaatgt aatgtttgag aattattatc agacaggata agagaaaaga
     1141 tcgataaatt caagaatatc caagataccg actaaagtat tcaactaagt tctcgagtag
     1201 ccctgtcttt tacagtaaaa aactcctgaa tagcggcttc ttctaaaaga gtataattct
     1261 gccaaatttc ggttacagca tttcttaaaa tctcaccttt cttaactctt gatgacattc
     1321 ccaagaatac ctgttctaag aaatctaaat cggcataatg agttaatgct tttcgtgact
     1381 gtaaccagtt aaacatcggc acaaattgtt caggaaaaat cgtgcgttgt tgttcgattt
     1441 gctgaaagat ctgtgcttgt acctcattta aatctttagc aaataaccgt tggaaatgtt
     1501 tagcgagaaa atggtcgatc ataatatccg acacaatgcc tttataacgc ccgaatgtgc
     1561 cttggagtaa ttgggttgtg aggctgtccg gtcggtccga aatcttatca atcgagcggt
     1621 gtaacaccac accgcttttt aagttatccg ctaaattgag atgcggaatt aaacctttat
     1681 agaaatcacc ggcaaagttg ccatataggg tctgttgctt ggtttgggtg tcaatttcaa
     1741 gtgaaatcag cgaatgggta agaaaattca tttatgctcc aagtgcagtt tggtgatact
     1801 caaacccaaa ctcgttggtt tcgcctttcg gtacaaactc aaataaatgc gtaatgcaat
     1861 ttggagcatc gctgtcttgg tgcgaaacaa aaagtagttg cgtttggctg ttagtcacta
     1921 attgttcaat gaactgtttg actaatttgc ggttaatgcc gtctaaacct tgtaacggtt
     1981 cgtctagaat cagaattgat gggtgtttca ccattgctcg ggtaatcaaa agtaagcgtt
     2041 gttgccccca cgagagagag cgaaacggct ttttggcaac attgcttaaa ttgaggcgtt
     2101 ccaaccattc cattgctttt aattgcaagg cattcggcac ttgttgatac acgccgatgc
     2161 tgtcaaaaaa gccagaaaga atgacctcca ttgcggagca atttacccga taatccatat
     2221 gcaactggct gctgacatag ccgatatttt tcttaatatc ccaaatggtt tcgccacttc
     2281 cccgttgttt gccaaatagt cggactttat tggcataaga ttgtgggtga tcgccggtga
     2341 taatcgaaag caaggtcgat ttcccagctc cattcgggcc tttaatccac cagtgttgtt
     2401 taggctgaac cgtccaactt aggttatcta aaatcttctt ctccccatat tgaatattca
     2461 cattttccaa ctcaaacgga ttgatgtttt ccggcaggct gagtagcgga gctgcactat
     2521 caggcagtgg cacattgaca ttctcttctg caaattttag ctgagaatag accgcttgtt
     2581 gttcaatttc tgctcgctct ccttgcagaa ttaatgataa attatctaat aactcaatat
     2641 gattggcagc atcaggaata tcgttaaaac gatttacaat cagcactaac gccattttgc
     2701 tttgtagttc ggcaatcagt tgttgccaat attgcaccga ctgctgatcc agcccttcaa
     2761 acggttcgtc taaaatgaat aaatccggct cgctcactaa catttggcaa aatagcactt
     2821 tgcggctttc accggtggaa aggtgcataa acgggcgttc aagcagatgt tgaatatgca
     2881 atttgtgggc atattcctca cataacgcct cttttggact gccatttaaa attacttgtc
     2941 gtgcggttaa gccgaaatca tcgggcgaga cactatcgtt gttccgatct ttgaaaatct
     3001 gctccaacat tttttgttgt tgctcgaaag agaggagctg aatatgttgg aacgaattac
     3061 catagtcgcc ggaatagagc gagattttac cctgtaaagc gagtgaaaaa gttgttttgc
     3121 ctgaaccgtt tccgtctacg accacctaaa agtcattggg ttggatctgt aaggcgtcaa
     3181 tcgtgagttt atgttgttta accagtgaaa atcgggcatt ggttattgta agtgaaggct
     3241 gtgtttgcat atatttcccg ttttaactta gttgtgtccc gctgacgaac caatccgctc
     3301 gaccgtttaa gaaatcttgc accgacattg gttttttacc cgccggttga agttgggtaa
     3361 tattcagcac gccctgttgg gtggcaattt gaatcccggt tttatccaca ttaattaccg
     3421 tgccggctgc tttttcttgg tgaggtaaca ccgtggcttg gtgaattttg atactttgct
     3481 caacgccatc aacggttaag gttaaaaaac taaacggcca agggttaaaa gctcggatat
     3541 tgcgttccag ttgaactgct gggagttgcc aatccaattt agcttcttct ttggaaagtt
     3601 tctcggcgta attggacagt gcttcatctt gtttttccgc tttgaatgtg tggttggcta
     3661 aaccgtttaa cacctcaagc aatgccagag gggcaagttc tgccagtttg gcatacaagg
     3721 aggcggaggt ttcattcggc tcaatcgggg ttgtgacttt atgtaacata tcaccggtgt
     3781 ctaagccaac gtccattagc ataatggtta cgccggtttc tgtatcacct gcccaaatcg
     3841 aacgctgaat cggagctgct ccacgccagc gaggtagtag cgaaccgtgt acgtttaggc
     3901 aaccatattt aggagcattc aatactgctt caggtagaat taagccgtaa gctaccacca
     3961 ccatcacatc ggcatttagg gctttcagtt cagcttgagc ctcttcctta cgcagggatt
     4021 tgggttggta aacaggaatg ttgtgagctt cggccagctg ttttaccggg ctggcttgca
     4081 gttttttgcc tcgcccggca ggtttatccg gctgagtata aaccgcaatc acgttatgct
     4141 cggaatctaa taaggcttgt aaatgttgag cggcaaaatc aggcgtgccg gcaaaaataa
     4201 tattgagttt tgacatattt tttattcgtt caagttatca atgaaagact tattaaacca
     4261 ttaaacagca caaataaaaa gtggcttgaa tatggtatca ttgccacatt caagataaga
     4321 gaatcaaaca atggaatttt ttatccccaa agcggataca atttttgaag aagagattaa
     4381 aaaaagccga tttatcacct accttcgcca tactgagggt atggagcagg ccaaggcatt
     4441 ttggcaggag ctgaaaattc agcatccgca cgcacgccat tggtgttggg caacggtggc
     4501 aggcttgccg aatgattcgc aacaatacgg cttttcggat gatggagaac cgtctggtac
     4561 agcaggtaag ccaatgctca attatttgct tgggtcaggc ttgggggaaa ttacagcggt
     4621 ggtggttcgc tactacggtg gtatccagct tggcaccggc ggcttggtga aagcctatgg
     4681 caatggggtg caacaggcgt tattgcagtt ggagcggatt cgcaaagttt tgcgaaaaaa
     4741 ctaccgcttg caatgtgaat atgagcagtt taataccatt tctcatctca ttagcgagaa
     4801 agatattgtg attgtcgagc aactttttag cgataaagtg gatttgttgc tggcatttaa
     4861 cccgagcgag gttgaggcct ttgcagatga attaacccaa cgcttttcgg gcaagctcgc
     4921 attaataaaa gaagaaatct agtctatgca atttttttcc attattcgta ttgttggcat
     4981 tttggtgatg tgtttttcat tcacaatgct tgtgccggca acggtcgccc taatttatgg
     5041 cgatggcggt gggcgggcgt ttttagaagc cttcgctctg aattttatgg tcggtacgct
     5101 gctttggtgg ctgtgccgtg acaacaaaaa cgagctacgt tcccgtgagg gctttttgat
     5161 tgtagtactg ttttgggtgg tgctgggttt gctcggggct gtgcctttta ttattttgga
     5221 aaaccccgat ttaaacgtgg cggaatccat ttttgaatcc ttttccggct taactacaac
     5281 gggtgcaacc gtcatcaccg gcttagatag cttgcccaaa gcgattttat tctaccgcca
     5341 atttttgcaa tggctagggg gaatggggat cattgtgtta gcggttgcga ttattccgct
     5401 gttaggcatt ggtggaatgc aactttatcg tgcggaaatg cccggaccgc tcaaagagca
     5461 gaaaatgcga cctcgcattg cggaaacggc aaaagcgttg tggctgattt atctcagcct
     5521 gacgattctg tgtgcggtcg cattttggct cgccggaatg acggtgtttg atgccatttc
     5581 gcatagcttt tccacggttt cgattggcgg attttctacc cacgatgcca gcatcggcta
     5641 ttttaataat gcggcaatta gctatattac cgtgtttttc ctgctacttt ctgcctgcaa
     5701 ctttgcattg cattttgcgg tgattgatcg catacgagat gcacaatcac gcaaaaaagg
     5761 gggtatttta agccgcttgt attggggcga ttacgagttt cgttttttct tgatggtgca
     5821 gttagggctt ttcttggttt gtaccttggt gttagtgggt tacggttatt tcgataatac
     5881 ctctgttacg attgagcaag cgttgtttca atcggtgtcc atttccacca cggccggctt
     5941 tactaccaat gattttagcc aatggagttc gtttttaccc acgctgttgg tgctgtcttc
     6001 atttatcggt ggttgtgccg gctcaaccgg tggcggcttg aaagtgattc gggtgttgct
     6061 gctttattta caaagtaaac gtgaaatcca ccgctacatt caccccaatg tgattcaacc
     6121 gattaaatta ggcaaccacg ttttatcgga acgggtggtt gatggtattt gggcgttttt
     6181 ctcggcgtac tttttcgtgt tcgtgatctg ctggcttgct accatcgctt gtggaatgga
     6241 aacctttgat gctctaaatg cggtaattgc ctcactaaat aatctaggtc ctgcattagg
     6301 gagcgtgagc agcaatttca cccaagtgcc ggacagtgcc aagttagtgc tgacttttgc
     6361 aatggtatgc ggacgtctgg aagtgtttac cttgctggtg attttaagcc ctgttttttg
     6421 gaaagattaa atgaaaacct taattctcta ttttacgacc gatggtcaaa ccaaaaaaat
     6481 tgccgaacga ttggcggacg tgattactca cgaagtcgag ctgatttcgc taaaagatca
     6541 agcggtcgat tttgccgaaa aaattgcaaa tgccgaccaa attgtcatcg gtgcttcaat
     6601 tcgctatggg cattttaacc cgttggttta tcagtttgtg gaacagcatt atccggcatt
     6661 aaacgccaag aaaactgcct tttacggtgt gaatttgacc gctcgcaaag ataatcgaaa
     6721 cacgcctgaa accaatactt atgtgcgtaa atttttagct aaagtgaaat ggaaaccaac
     6781 ccacattgag gtaattgctg gggcattact ttacctacgc tataagccat tcgaccgatt
     6841 gatgattcgc tttattatga aaattaccaa aggcgaaacc gatacctcca aagaatatga
     6901 gtacaccgat tggcagcagg tggagaattt tggcaaatta ttagccaatc agttataatc
     6961 aaactgatct aaatcaaaaa aatgtaaatt tatttaaatg ttgtagaaat tttaaagatt
     7021 ttgattataa tcgccagccc acgttcttgc gaagaccgtg tttaatcatt gaatgaaagg
     7081 aaagccccct tgagtatttt aaaagagttc cgtgaatttg cggtaaaagg taatgttgtt
     7141 gatatggctg tcggtgtgat tatcggcggt gcattcggta aaattgtttc ttcattagtt
     7201 agcgatgttg taatgccacc tatcggttgg ttaatcggtg gcgtggattt caaagattta
     7261 gccattgaaa tcgccccggc aaaagaaggt gcggaagcag tgatgttaaa atacggtgca
     7321 tttatccaaa acgtatttga tttcttaatt atcgcacttg cggtattcgg tatggtgaaa
     7381 gtgattaact cactgaaaaa agctccagtt gtagaagaag ctcctgcaga gccaacagcg
     7441 gaagagaaat tattaactga aatccgtgat ttattgaaaa aataattaac tgattttgaa
     7501 acaagggcta ttttagaata tctagaatag ccctttgtgt tatggttaaa aagaaaaaaa
     7561 ccaacataaa gtcggttttt ttcatatctg ttcgatatta cgctaatttt ttgatttgcg
     7621 ctgctaattt agatttgtgg ttagccgctt tgttagcgtg gattaagttt ttagatgcca
     7681 tacggtctac aactttttgc atttcaacga aagccgtttg agctgctgct ttatcgcctg
     7741 ctgctactgc tgcatatact tttttgatga atgtacgcat cattgagcgt tggcttgcgt
     7801 tgtgttggcg gcgtttttca gattgaaccg cacgtttttt tgctgacttg atattagcca
     7861 aggtcaaact cctaaaatat ctgtgtaaaa attagatata aacaaaatcg ttgtttatat
     7921 tgcctatcga tagtttttaa ttcattttca acgagacacg tgcttgaaaa taacaccgtt
     7981 tttctgatag aaaacgatag ggcgagattt taacagtttt tttctgattt tcctataaca
     8041 aactgctaaa attatgatcg atttttagga tcagactaca agcggtctga tttttcaata
     8101 attttactaa tattactctt tattatgagc aaaaaacttt taagatcagg aatgatcgta
     8161 agctttatga ccttaatttc tcgcatactc ggtttgattc gagacattgt ggtggcaacc
     8221 attttaggca caggcgtgag tgccgatatt ttcctgtttg ccaaccgtat tcccaatttt
     8281 cttcgccgtt tgtttgccga aggggcattt tctaaagcct ttgtgccggt gttggcggaa
     8341 tataatgcgg ataacgatcc aaacaaaacg agagaattta ttgccaaagt atcgggtaca
     8401 ttaggaggtt tggtaactgt tgttaccctt gtggcaatga ttgcctcgcc tgtggttgcc
     8461 gctctttttg gtacaggttg gtttttagat tggctttacg acgggccaaa tgccgaaaaa
     8521 ttcacccaag cctctttttt gctcaaaatc actttccctt atttgtggtt tattaccttt
     8581 gtggcgttat ccggtgcggt gttaaatacc atcggtaagt ttggggtgat ggcattttcc
     8641 ccggtgttgc tgaatgtggc gattatcgcg gtagcgttat ggggcagaga ttatttcgat
     8701 tccccggata ttgccttagc gtggggggta tttttaggcg gcttattgca atttttattc
     8761 caaattccat ttatgaaaaa agagggctta ctggttaagc caaaatgggc gtggaaagac
     8821 gaaggtgtca ctaaagtccg taaattaatg attccggctt tatttggcgt ttccgttacc
     8881 cagctaaatt tactgctaaa ccaagtgatt gcctcgtttt tgattaccgg ctcgattagt
     8941 tggatgtatt atgccgaccg cttaattgaa tttccgctcg gtttatttgg aattgcgatt
     9001 tccaccgtcg tgctgccaag cctttcccgt attgcgaaaa acaaagaact cactgaaatc
     9061 caacgtggag aacactttca aaacacaatg gattgggggg tgagaatggt gctgttgctc
     9121 ggcattccgg caatgatcgg tatggcagtg ctggctcagc cgattattat gacaatgttt
     9181 atgcggggta aatttggttt tgaagatgtg ctggcaacct cttatccact ttgggtaatg
     9241 tgcttggggt taaacagcta tatgttgatt agcgtgctgg caaacggttt ttatgccaac
     9301 caaaacacca aaacaccggt aaaagttggg attattgccg ccttaagtaa tatttgcttt
     9361 ggcttggcgt ttgctccgtt tttgggatac attggtttag cgttagcttc tgcgtgttcg
     9421 gcattagtga atgtgagctt gctgtatgtg aatctctcaa aaaatggtta ctataaagta
     9481 agccataaaa ccgtgctttt tgtgttgaaa ctattcatcg ccgcttgtgt aatgggggcg
     9541 ttggttgcct atttcacgcc tgagattgaa ctttgggcat taatgacaat gtggcagaaa
     9601 gtgtattggc tgatttggct gatgatctta gccggcggta gttattttgc ctctattttg
     9661 gtattaggca ttcgtaaaaa agatttccgc tcggcataaa atgaaatcat taaaactgaa
     9721 aatcccgccg ccggcttggt tcttgctttg tgccgcttta atgtggctgg tagctcaata
     9781 tgtgccggtg agcttgccga attatcagca tacagccata ttttttagcg gtttagctgt
     9841 ggcgataatt ggcggagcgg ttgccgtctc ggcactttgg gtcatacacc aagcgaaaac
     9901 gacatacagt ccttttcgac cacaacatac cgctaaattg gtcacttggg gcatttaccg
     9961 caaaagccga aacccaatgt atctttcgtt actattaggt ttgattgcgt gggcattatg
    10021 gttgggggca atgttggcgt ggctggtttt accgctgttt gtatggttga taacctattt
    10081 ccaaatcaag ccggaagagc aaattttagc ccaaaaattc ggcacacatt atgccaaata
    10141 ttgcaaccaa gtaaggcgtt ggctttaaat gcaagcggtg agattttgtt ggaaatttgc
    10201 aaatttttcc gaaaatctca ccgcttgtgg ggttagtgat tgaaatcagc cgtcattaag
    10261 tcgtgcgagt tgtccatcgc taaattgata aagcgttcat actgttgcag cacgtcggca
    10321 atcaactctt ctttggtcat atattgcaca tcataacctt tccgcccgtc taagaaataa
    10381 gtaatcggct cgtaaatggt attttgctca atgttcggta ggttgtcgtc acctaccacc
    10441 aaatccgata attcccgtgg cacactttca atgccgtaaa tgaaattgcg taaattttct
    10501 ttcaccactt caaactctaa tttcgggttt tgttcgttgg tgaaattcat tttagcgatt
    10561 aagccatagc tttcaaattc ctcgataagt tctaaaaatg ctggtctggc aactttaata
    10621 aagaagtgac ggacatcttg cttattgctt gggttgatga ttttctccaa gcgttgtttc
    10681 caatctttac ccgcccaatg ttggctacct tgcgagaatt ttttgttgaa gtattggtta
    10741 tctaccatta atcctttcca taagccgata cagagaatca gcataatgaa ggtaaatggt
    10801 aaggcgataa tcagtgtcat tgtttgcaga gaagccaagc cacccgaata gagtagtgat
    10861 aacgctaaga tggctaataa tgctccccaa agcacgcttt gccatttcgg tgcattttct
    10921 tcgccttgtg aagcaatgct gttgagaaca aaaatccccg agtcggcaga ggtgataaag
    10981 aaaatactga taacaatgac ggcaacgaaa gaggcaatag agccaaacgg taattgctca
    11041 aaaaaggtaa ataacagttg ttcggtattg ccgctgactt cagctaaagc accggcagtt
    11101 tgttgatcga accaaatggc agagctgccg aagctggtca tccataaaat gttaaacagc
    11161 gatggaacaa atagcacccc taaaataaat tcacgaatgg ttctgccttt agagatcttg
    11221 gcaataaaca aaccaacaaa tggcgcccaa gatgcccacc atgcccaata aaggaccgtc
    11281 cagccgctta gccagccttg atgttccggt tcataagcga aggtacggaa actcatctca
    11341 agcagcgagc taaaataata gcctaaattt tcggtgaagc ttgagaaaag taatagagtt
    11401 gggccggtga ttatcacaaa aataagtagc aatccggcta atgtgagatt gatttcactt
    11461 aagattttaa cccctttgcc tacgcccgaa acggcagata acacggcaag agccattgct
    11521 actgttacga taatcgcaag aacagtaaaa ttgctctgtt caattaaacc tagattgtta
    11581 aagccagcac tgacctgcat caccccaaag ccaagtgtag tcgttaaacc gaaaatcgtg
    11641 ctacaaaggg caataatatc aattaaatgc ccccagaagc ctgaaatacg atgttttagt
    11701 aagggataaa atccggaacg aatagtgagt gctaacttat atctgaagcc aaaataagca
    11761 agagctaagg caatcacacc ataaattgcc caagcgtgaa taccccaatg atagaacgtt
    11821 gtcatcatcg cttctttcat acgctccggc tcagttaaat tttgttggac gggtttaagg
    11881 taatgcaaaa taggttctgc taccccaaaa tacattaacc cgatccccat tccggcggcg
    11941 aataacatcg caatccaaga gccaaaacca aattcaggct catcggtatc tgcccctaat
    12001 ttaatatcac ccaatcggct gaaagagaga aaaattagaa acaggaaaaa gatagagcct
    12061 gcaaaaatat agaaccagct aaaatgttgg aagagactat ttttgatggt atcaagtgag
    12121 gtttgtgctt gctgtggaaa gatgatacag aaaacggcaa caaagctgac aaagagtaaa
    12181 ctcggtagga aaatcggtac cctaaaggta cttcctgtgt ttaatttttt gattaaatcc
    12241 aatgctattt cctctatttt tgaatggtta gaggcttgaa tatagcaaaa agatataaaa
    12301 ataacaaatt taagacgtat tggtaataat attgcaacct aatgggtttg gtaaaaaaat
    12361 cgggaaattt gaccgcttgc acattcatta tttgcgagta gaatattttt catttataaa
    12421 aaacgaataa agaatgcaca cacaacataa cgctcaaaaa atggttttgc ccattttact
    12481 gctgatttcc ctttctcatt tgttgaatga tttagttcaa gcagtaatgg tttcgatcta
    12541 tccaatgcta aaagaaaatt accaactgag ttttgctcaa attggtatga tttcactcat
    12601 ttatcaaatt accgcatcta ttattcagcc gggtattggg ctttataccg atacccaaaa
    12661 ccgaatttat tgcccgtcag tatgctgatt acgcttcttt ccgtgatttt acttgccttt
    12721 tcgccgaatt ttggcgtgtt actgatagcc gctgcgttaa tggggatagg ctctgccatt
    12781 tttcaccctg aagcctctcg ggtggctcga atggcatcgg gcggtaaatt tggtacagct
    12841 cagtcgcttt tccaagtagg tggaaacagt ggatcggcgt taggtccgct cttagttgca
    12901 ttatttattg tgccgttagg gcaaagtgcg gtgatttggg ttgttgcatt tgtattattg
    12961 gcattatgat gggttttata taaagtaagc cgttgggtga aatatgaagc caaaccgctc
    13021 attatttcac caaaccatat tcaacaacgc ttacacggta aattattagc cagagcatta
    13081 ttaattatcg ctttattgat gttagcgaaa tttatttata ttgcgagcct cagtaactat
    13141 ttcacctttt atttaatgga aaaattccaa ctcaatatag caatggcaca gctctctcta
    13201 tttacctttt taggtgcagt tgctttaggc gcttttgtcg gcgggccgat tggcgataag
    13261 attggacgaa atgcggtgat ttggttctct ttcttaggta tggcaccttt tgctttgttg
    13321 ttgcctcacg cagatctctt ttggacgatt gtgtgtgcga tttttgccgg ttttattatg
    13381 tcatcagcgt tctccgctat ggtggtttat gctcaagaag ccgtaccagg cagagtaggg
    13441 ctgatttccg gcacaatgtt cggtttaatg tttggtattg gcggcttaag tgccgccgta
    13501 ttgggttttt ttgcggatga atatggcttg gagagtattt ttaaagcctg tgcctatttg
    13561 ccactacttg gttttgctgc attagggcta ccaaaacgaa atatttaacg ttttattttt
    13621 agcgtttgac accagctttt ttcataccca ataagaaaac ccccacccca atccaaacca
    13681 gaatgtagcc tacagcacgt tcggcggaaa gtgtctcatt aaaaatcagc acaccgcata
    13741 aaaattgcag ggtaggtgaa atatattgca gcataccgag tagcgacatt gaaatgcgtc
    13801 ttgcacccat tgcaaaccat agcaatggta aggtagtggc aatgccggag cagagtagca
    13861 ctgccatttg taaaggattg agttcactga ataccaaaat gttttggtgg taacaaaagc
    13921 agagataggt gatggcaaaa ggcgacatca gcaaagtttc taacgccaaa ccagacaaag
    13981 gttccattgg ggcaagttta cgaatcagcc cgtaaataca gaaactggcg gctagaatca
    14041 atgcgaccca cggaatttgt ccggcaggaa tagcaagcca taaaatgccg ctaattgcaa
    14101 acagcagagc caataattgg gctttattca gctgctcttt tagaataagc ctaccgacaa
    14161 acacgttgaa aatggggttg ataaaataac ctagactggc atctaaaata tgctcattga
    14221 cgattgccca taagtaaacc agccagttca cgccaatcat aaaagaagaa agcacgaaca
    14281 gcccgagtac ctttggctgt ttaaaggcat taataaccgc tcgcccttgt tggaaaatca
    14341 gcagcagaaa cacagcaaat agggcagacc aaagcacccg ttgagccaaa atttgctcgg
    14401 caggcattcc cgattggttg atcggatacc aataaatcgg aaaggttccc caagttaagt
    14461 agcacagtag ggcatagtgc caaccctgta atttgcctga aatattcatt ttgctttcct
    14521 aaacgagtgt acaagcggtc atatttgtcg atttttttgc aaattgcaaa tcacaaaacg
    14581 gcataaaaaa ttaggctttt tcaatgccga aagaaataac ctcttcaatt ttttccgcat
    14641 ccattgccag cattaacagc ctatcaaccc caagggcgac acctgagcag tttggaaaac
    14701 ccgctttgag tgcggcaaga aaacgcacat ctagttgctg tggctccagc cccatttttt
    14761 cacgttgcag attatcttgc tcgaagcgat gaatttgctc atcagcatcg tctaattcgt
    14821 ggaagccgtt acagagttcc aagcctttgt agtaaaactc aaaacgttcg gcaacacggt
    14881 gatcttccga gctaatttga gctaatgccg cttgggtgga agggaaatga taaacggcag
    14941 ttggtctttc ttgcccgata ttggcttcga caacctcgct gaataaaaat tgtaacaagg
    15001 tgtcacgctg ttcatcatca tcacattgca agccgtgttt tcgggctttt tccacaagtt
    15061 gtgctttggt ggcagaaagc ggatctaatc cgacataggt ttggaacaca aattgatagc
    15121 tgaatgattc tgccggttcg cagtccaaaa tttgttgcag taaatcatcc acttcattga
    15181 ttaagcgata catatcaaaa tgcgggcgat accactccag catcgtaaat tcagggttgt
    15241 gtcgcttacc ggcttcctcg ttgcgaaata ctttacacag ttggaaaatc ggtccactcc
    15301 cagcagcaag tagtcgcttc atatgatatt ccgggctggt catcagatgg agtgttttcg
    15361 cctcagggga aaaaggcgat tgaaactgcg tattgaaagt cgaaagatga acgtctgtca
    15421 ccgaaaattc gcttaaaatc ggggtttcta cctctaaaag ccctcgatcg gtaaagaact
    15481 tgcggatttc cgtaatgatt tttgaacgtt ggatcaggtg aggaatagag gctgttggtt
    15541 gccaatcaat attatcgagt tgtaaattgt tcataaaaaa tgaccgcttg aaaatgtgag
    15601 gctattttag cctaaaaaag tgagttgccc tagttaccga tcaagaaaaa taaagagagg
    15661 gttttaactt ttttgcaaca aattaaattt tctcatttta aacattagaa attttctttc
    15721 tatcactgtc caattaagag ccattctcaa tacctttatg aagctttatt accttttttg
    15781 aggtagatca caaaattaca ttttttatgt tacaaatttg taaaaatagg ttatctcatt
    15841 gctcaaatag tggcacaata tgattacttt ttaatgaatt aagttattta actttcggag
    15901 tgcattatgc aaagtgttaa ttttgatgtc gcgattatag gtgccggtgg tggtggcttg
    15961 cgtgctgcta ttgcggcggc tgaagcaaat ccaaatctaa aaattgcttt aatttcaaaa
    16021 gtttacccaa tgcgtagcca tacggttgca gcagaaggtg gttcagcggc ggtaattaaa
    16081 gataccgact ctttcgacaa tcactttaat gataccgtcg gtggtggtga ctggttatgt
    16141 gagcaagata ttgtggagta ttttgtagag cattcgccga ttgaaatgac acaattagaa
    16201 cgctggggtt gcccttggag tcgtcgtgaa gacggtgaag tgaatgttcg ccgttttgga
    16261 ggaatgaaaa ttgagcgtac ttggtttgcg gcggataaaa ccggtttcca cattttgcat
    16321 actttgttcc aaacttcgat taaatatccg aatattgtgc gttttgatga gcattttgtg
    16381 ctggatattc tcaccgacaa cggcgaagct cgtggttgtg tggcaatgaa tatgatggaa
    16441 ggcacacttg ttcaaatcaa tgcaaatgca gttgtgattg caaccggtgg cggctgccgt
    16501 acttatcgct ttaacactaa cggcggtatt gtaaccggcg acggtttatc aatggcgtat
    16561 cgtcacggtg tggctttgcg tgatatggag ttcgtacaat atcacccaac aggtttgcca
    16621 aataccggta ttttgatgac agaaggttgt cgtggtgaag gtggtatttt agttaataaa
    16681 gatggctacc gttacctgca agattatggt ttaggaccgg aaacacctat cggcaaaccg
    16741 gaaaacaaat atatggaatt aggccctcgt gataaggttt cacaagcatt ctggcaagaa
    16801 tggcgtaaag ggaacacctt aaaaaccgca aaaggcgtgg acgtagttca cttagattta
    16861 cgccatttag gtgaaaaata tttacttgag cgtttaccgt ttatttgtga attagcgaaa
    16921 gcctatgaag gggtcgatcc ggctaaagcg ccgattcctg ttcgcccggt ggttcactac
    16981 acgatgggtg gtattgaagt ggatatgaat gcggaaacct caattaaagg cttattcgca
    17041 gtaggtgaat gtgcttcatc aggcttgcac ggtgcgaacc gtttgggttc taactcatta
    17101 gcagagcttg tggtgttcgg caaagttgcc ggtgaaaatg cggctcgccg tgcgttagaa
    17161 gtgactgctc gcaaccagcc acaaattgat gcacaagcaa aagatgtggt ggctcgcttg
    17221 cacgcattag cgaaccaaga gggtaatgaa tcttggtcgg atatccgtaa ccaaatgggt
    17281 gatgcgatgg aagaaggttg tggtatttac cgtacccaag aaagtatgga agcgactgta
    17341 aacaaaatcc aagagctaaa agagcgttat aaaaacatca gcgtaaaaga taaatcaagt
    17401 gtgtttaaca ctgatttact ctacaaaatt gaattaggct tcattttaga tgtggctcaa
    17461 tccattgctt gctctgcggt agagcgtaaa gaatctcgtg gggctcacca acgtttagac
    17521 tatgttgagc gtgatgatgt gaactactta aaacacacac aagcgtacta caatgcagag
    17581 ggtacaccga cgattaaata cagcgatgtg aaaatcacta aatcacaacc ggctaaacgt
    17641 gtgtatggtg cagaggctga agcccaagaa aaagtcaaaa aagcagcaga agctcaagca
    17701 caacaataga gaaggagtag taaaatggca aatttagata aaatgaccat cgaagtgcta
    17761 cgctacaacc ctgaatcaga tagcgagcca catttagaca gatatgaagt gccgtatgac
    17821 agccaaactt cacttttaga tgcattgggc ttcattaaag acgaattaga accggaactt
    17881 tcttatcgct ggtcttgccg tatggcgatt tgtggttctt gcggaatgat ggtaaacggt
    17941 aagccgaagt tagcttgtaa aacattcctg cgtgattaca gcggttttat gcgaattgag
    18001 ccgctggcga acttcccgat tgagcgtgac ttagtagtgg atttaagcca ctttattgat
    18061 agcatcgagg caattaaacc ttatattatt gataataaag caccggaagg acagcgtact
    18121 aaacaaacgc cggcacaatt agagaaatat cgtcaattct caatgtgtat caactgcggt
    18181 ttatgttatg cggcttgccc acaatttggt ttgaaccctg aatttatcgg acctgctgcg
    18241 attacattgg ctcaccgcta taacttggat aaccgtgata atggtcgtga agagcgtatg
    18301 aagctactca gcagcaaaaa cggtgtttgg agctgtactt tcgtgggtta ctgctcggaa
    18361 gtctgtccga aacacgtcgg ccctgcttcg gctgtaaacc aaggtaaact tgaaagtgcg
    18421 aaagattatg ttatctcaat gatcaaaccg agataggagg aagaaatgtc agcaacaaaa
    18481 cgtagacctt atgtaagggg aatgaaagcc agctggtgga aaaaactcga cttctataaa
    18541 atgtatatgg tgcgtgaagc tacctgtctt ccaactgttt ggttctgcat tgtattattt
    18601 tatggagcag ttgcgttaag taaaggaaca tttactaccg attttgtgga tttcttacaa
    18661 aatccgttag ttgttatcct aaacataatt tcattggcag caatgttata tcatgcggca
    18721 acactttttg tgatgacacc tgccgtcatg tccgtgatgg ttaaaggtaa acacttacca
    18781 gtctcggttg gaagaaatat tctttgggca gcaacaggcg taattagcgt aattgcatta
    18841 atcttggttt atatttaaga aggggaagaa aatgagtctt gatcaaaacc caaaacgttc
    18901 aaatgaaccg ccggtatggt tgctttttag tgctggggga atggtaagtg cattattttt
    18961 ccctgtggta atctttatta tcggtttatt actgccattc gggttagtat caccagataa
    19021 tatcatttcc tttgcccata cttggatcgg caagctcgct attatggtat tagcgatttt
    19081 ccctatgtgg gcaggaatgc accgtatcca tcatggatta cacgacctga aagttcacac
    19141 gccagcaggt aatgtgattt tctacggatt gtctatctta tacacaattc tagtaatcat
    19201 cgcagtcgtg cagatttaaa tgagaaagac catcttgtat aaagcagatg gtcttttcat
    19261 ttttaatatg ctaacaagcg gtcgaattta taagaaaatt tgcaaatatt agaaattttg
    19321 ccgataaaac gatcgttttg tattaaatat ctgcaaaaaa gat
//
LOCUS       DANLZQ010000035        19275 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.035, whole genome shotgun sequence.
ACCESSION   DANLZQ010000035 DANLZQ010000000
VERSION     DANLZQ010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 19275)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19275)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19275
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.035"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            68..973
                     /locus_tag="PXE50_001157"
     CDS             68..973
                     /locus_tag="PXE50_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HDL5622081.1"
                     /translation="MSQKYSVAVIGLGAMGMGAAKSCIAAGLDTYGVDLNPNYLETLK
                     AAGAKKVGTSAVDFAAELDAVLLLVVNANQVNAVLFGENGLAQHLKQGTVVMVSSTIS
                     AQDAKNISQKLTDLGLVMLDAPVSGGAAKAAQGEMTVMASGSSEAFEKLKPVLDAVAG
                     KVYNIGEEVGLGATVKIIHQLLAGVHIAAGAEAMALAARAGIPLDLMYDVVTNAAGNS
                     WMFENRMKHVVEGDYTPLSMVDIFVKDLGLVNDTAKSLRFPLHLASTAYSMFTEASNA
                     GYGKEDDSAVIKIFSGIELPKKEGK"
     gene            975..2216
                     /locus_tag="PXE50_001158"
     CDS             975..2216
                     /locus_tag="PXE50_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005754893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four-carbon acid sugar kinase family protein"
                     /protein_id="HDL5622082.1"
                     /translation="MLGIIADDFTGASDIASFLTENGLKTVQMNGVPKTTLNSQVDAI
                     VISLKSRSNPVEEAIQQSLQALDWLKQNGCSQFYFKYCSTFDSTEKGNIGPVTDALMA
                     ALDTDFTVVTPALPVNGRTIFNGYLFVGDVLLNESGMRNHPITPMKDANLVRLMDAQS
                     QGKTGLVAYADVIQGAERVKARFAELKQQGYKYAVVDAADNSQLAVLAEAVADFQLVT
                     GGSGLGAYMAAYRSGGKKGTNAFVPSKGKTVVLSGSCSVMTNTQVAAYQQKAPSYFLE
                     AEKAIQDPNYVETLYQWVIANLDGDFAPMVYATVPPEKLKEIQTQFGGDKASHAIENT
                     FAKLAEKLQAAGVTNFITAGGETSSIVVQQLGFSGFHIGKQIAPGVPWLQAVEKPIFL
                     ALKSGNFGKEDFFSFAQEMFV"
     gene            2213..2845
                     /locus_tag="PXE50_001159"
     CDS             2213..2845
                     /locus_tag="PXE50_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014668373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase"
                     /protein_id="HDL5622083.1"
                     /translation="MTEQEQKIEMVNLARSLFERGYTVGGAGNLSVRLDENRILVTPT
                     GSSLGRLEADRLSVLDMQGNVLSGDKPSKESVFHLAMYQKNPACQAIVHLHSTYLTAL
                     SCLENLDTDNAMRAFTPYYVMRVGKLPVIPYYRPGDINIARELGERALDGKAFLLANH
                     GVVVTGSDLRDAVDNTEELEETSKLYFILQGQKVRYLTDDEVNDLKNRGK"
     gene            2847..3623
                     /locus_tag="PXE50_001160"
     CDS             2847..3623
                     /locus_tag="PXE50_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005547735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxypyruvate isomerase family protein"
                     /protein_id="HDL5622084.1"
                     /translation="MPKFAANLTMMFNEVPFLDRFEAAANAGFKYVEYLWPYDYPAAE
                     LKAKLEQYGLKQVLFNTAAGDVAQGEWGVSAIPGREADSHRDIDLALEYALALGCENV
                     HVMAAVVPEGEDREAYKQTFIKNVQYAADKFKPHGINVLLEALSPEVKPNYLLKSQFD
                     TLEIVEAVNRDNVFVQLDYFHAQNVDGNLSRLTDKLKGKFAHIQIAPVPDRHEPDEGE
                     INYQYIFNKLDEIGYEGYVGCEYKPRAETTSGLGWFEQYK"
     gene            3676..5034
                     /locus_tag="PXE50_001161"
     CDS             3676..5034
                     /locus_tag="PXE50_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntT protein"
                     /protein_id="HDL5622085.1"
                     /translation="MSNEMLILIGLASVVALLVIMIKGKVHPFLALGLVSIAVALTAG
                     IPMSKVIPTLISGMGSTLGSVALIVGLGAMLGKIIEKSHGADVLANWLLQRFGEKNAP
                     FALGMTGFIFGIPVFVDVGFIVLLPIIFSVARRLGGNILVYSLPIGLAMLLVHVLVPP
                     HPGIVAGAQNLNADIGFVLGIGLVAALPAYLIGQKFIPFFTKNNFVKVVTSTDLLQHQ
                     KDLIKEKGIELPSFGKVLAMISFPLILIMLGTVTATTLPKEHIVREVFSMVGSSPFAL
                     FVAVCLSAYVLGFRYGWTKHKLEEVLESALAPIAGIILITGAGGMFGKVLDASGVGKA
                     LADVLANTGLPLLVLSFILSALLRAAQGSATVATITTTTILAPAAVAAGYNDLQLALL
                     TAAIGAGSMTLSHVNDSLFWVWTKFFNVPVSVGLRTWTFLTTIFGVIAFAVVGIIWML
                     FV"
     gene            5096..6436
                     /locus_tag="PXE50_001162"
     CDS             5096..6436
                     /locus_tag="PXE50_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase"
                     /protein_id="HDL5622086.1"
                     /translation="MLKKTLLFTLLLSHSLYAEDMIQENKSANITLLAEITAQGQKIN
                     GVALEYPDNVLSGSDLRQLYQVKTALDSAEKENRSVLKAYVNNEPKVTALPQAGKFVI
                     IELDTADKNAATYSVKDANKAPMKFKSKDENGNIVETEKVQAVKIPEFFANRLIYSAE
                     QKGLLKLTSGTTLGKTEWTQTAEPDKIKTPYLDDFVAKQVSLDQSGNKLNYRLYSPLQ
                     KNGEKYPLVIFLHGSGQVGSDNLAHLLSSKGAIATLPYAPSFVLAPQYDQVFDPFDNA
                     AKGQKGGIHWQTENRINLVLKMIDETLKANPQIDTTRIYINGLSRGAEGGLNLLLARP
                     NFFAGALLMSGREAYTNEWVDGNATKTNLAAIKHIPIWFFHSKEDKVSPVKGSRINYR
                     ILKDELNAPNVKYTEFTFEQAGDNGIVNNNPHNTWDAVYNSPEVIGWLLQQKRH"
     gene            6448..7137
                     /locus_tag="PXE50_001163"
     CDS             6448..7137
                     /locus_tag="PXE50_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005577085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HDL5622087.1"
                     /translation="MFMYLSHPLDPKDLAWPGEPVVEVTRCTDVGEETPFSSFITKLP
                     NHCGTHMDAPRHFVKDGLSINELPIEYFCHKEVALIEIPKGEAEGITKEDLLPYVDIL
                     SKVSFAFLRTGFEKYRTENPAIYQNECPYISTGAGQYLSDTFPNLKGVGIDFLALGSP
                     SSRVPDAENPKNCHRAILGYYTGRFTTVIEDMHLAELPKNANIKQFFNAPWRIKGLDS
                     SQVTCIVELQQ"
     gene            7294..9111
                     /locus_tag="PXE50_001164"
     CDS             7294..9111
                     /locus_tag="PXE50_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme anaerobic degradation radical SAM
                     methyltransferase ChuW/HutW"
                     /protein_id="HDL5622088.1"
                     /translation="MIIKDTHWTSQQASPNAFPERQALMPIWGGKNIERNQWQSLWLE
                     QAPNALLQDGLAYFHIPFCASHCIFCGFYRNAWKENYSQIYTDRVISELRYESSLWRG
                     QGKIHAVYFGGGTPTALHTEDLVRLIRACYRYLPLAEDCEFTIEGRISHFDIDKAKAC
                     IEAGVNRISIGIQTFNSEIRKRLGRKHSGEEAQTYLKALSELNAVIVADLIFGLPNQT
                     DDIWQNDIEIATSLPISGLDIYAFNNYPFLPINRLIEHGKLPAPAGFDTQSLHYAYAV
                     EKLKAQGWQQVSNNHFAFPNRGERNRYNTLVKSNMPCLAFGSGAGGNFGGLSYQVQSD
                     LKTYLDSPLDQKSLSFLSKHGEHKALLGVIQHSMELGYLDTTPFEQNAKAEKLLQQWE
                     ALDLLKREKNQVYLNTSGRYWSPTLIRKLMLTLPQSSKDNNMITPLTKELENKLRTNL
                     KENPGQILEMLAGMNQCSLESVINCLPKEMVMQTGGERFVEIMQAIAGWNEAVTFIIH
                     TPDAIAEVTAKLPQGKIGRGFYNFEHGVDGGIHGHLRYENCAAIYLLDRPFMGKRTVA
                     LTFINQSGEAMFKIFVGRDEQGQLRENQIQAMRKLIGGC"
     gene            9114..9731
                     /locus_tag="PXE50_001165"
     CDS             9114..9731
                     /locus_tag="PXE50_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDL5622089.1"
                     /translation="MILVCGANGLLGRAICDKLPREKTIAVLRKDAMDTFFSERNIAV
                     EIADLLDLESCNALLQKTQPEILITVVGGKNEQGIRSDKTANINLIKAVEKYSPTTKV
                     VLVTSVGCAEQWDLISPLAQQALGEALKAKTEAEAYLQQTALNWLIIRPGGLNNDEVN
                     DEYQIVRDLPNERKMYVSRKSVATGIVRLLDSTENHQIFSIINRG"
     gene            complement(9815..10426)
                     /locus_tag="PXE50_001166"
     CDS             complement(9815..10426)
                     /locus_tag="PXE50_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentahemic C cytochrome"
                     /protein_id="HDL5622090.1"
                     /translation="MKSLSKIAFCFLAFIMPTFCFAGSNSYTTETIPLFADENLTQKI
                     GQLEAGAEIKLVQTTAKAAEIELNLWRKSKGFGRIWYHSFSKNITDAVFEKSFISNNP
                     LLEIVESKEDPNTGLVWQKVKMNVWVENAEFTQDLTNFWANTKNTYKTECSVCHKQRD
                     PKMHDANEWIAVFNGMVGFTDMDEATQKKVLRYLQMNAASSSQ"
     gene            10621..11529
                     /gene="glyQ"
                     /locus_tag="PXE50_001167"
     CDS             10621..11529
                     /gene="glyQ"
                     /locus_tag="PXE50_001167"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017806840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HDL5622091.1"
                     /translation="MSTKFNVKTFQGMILALQDYWASKGCTIVQPFDLEVGAGTSHPM
                     TCLRALGPEPMAFAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLDS
                     LKMLGFDPTQNDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPV
                     TGEITYGLERLAMYIQGVDSVYDLVWSDGELGKTTYGDVFHQNEVEQSTYNFEYADVD
                     FLFQCFEQYEKEAQYLLGLEKPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILR
                     IRALTKGVAEAYYASREALGFPGCKK"
     gene            11609..11869
                     /locus_tag="PXE50_001168"
     CDS             11609..11869
                     /locus_tag="PXE50_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622092.1"
                     /translation="MKPILYFADWCPDTAPFVAELDRLGIEYEPCDITKGGSTLKPFL
                     KLRDTHSAFDHAKANGYIGIPALLIEGEKVVLDLAELEGIFG"
     gene            11912..12946
                     /locus_tag="PXE50_001169"
     CDS             11912..12946
                     /locus_tag="PXE50_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1016 family protein"
                     /protein_id="HDL5622093.1"
                     /translation="MKTVIADNSAEFVNEISQLIQSSKQRMTVAVNAELTLLYWHIGK
                     RINDYILQGERAEYGQEVVKNLAQSLTEQFGKGWSKRHLNYTMQFATTFPNLEIVHAL
                     RAQLSWTHFKQIIHIDDPTKRGFYATMAAQERWSTRTLEDRIGSLLFERTAISKKPDE
                     TIIAELSLLREKGEYNQSMVLKDPYILDFLDLNDRYMERDLEDAILREIEQFLLELGA
                     GFTFVARQKRIQIDNDDFYIDLLFYNRKLKRLIAIELKTESFKHSHKSQMELYLAWLA
                     KYEQEADENPPLGMILCTGKKQEQVELLDLKNSDIHIAEYMTVLPSKAVLEQRLHLAV
                     ERAKERFLLK"
     gene            13324..13788
                     /locus_tag="PXE50_001170"
     CDS             13324..13788
                     /locus_tag="PXE50_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622094.1"
                     /translation="MSIKKLLSTTIDQLENIIQVSGESFEKITSDLAEKAKELNSEYN
                     IKCEKLGYAITLFEKNSEIEKRYISLLSDFDMDTSIKGFEKLSLLMNGKNDNARKEAE
                     EHFNELQNGLLEAQDYKKDLDIKIRKLARELYNENIAQLEIEEIKEHLYKNW"
     gene            13797..15863
                     /gene="glyS"
                     /locus_tag="PXE50_001171"
     CDS             13797..15863
                     /gene="glyS"
                     /locus_tag="PXE50_001171"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HDL5622095.1"
                     /translation="MTTQNFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEK
                     VEWFAAPRRLAVKVLSLAESQPSKEVEKRGPAVSAAFDAEGKPTKAAEGWAKGCGITV
                     EQAERIATDKGEWLVHRAVIEGQPTKNLLVDIIAKSLANLPIPKTMRWGDKTEQFVRP
                     VHTVTLLFGAELIEGEILGVKSGRTIRGHRFLGEREFQIENADQYPQLLKDRGSVVAD
                     FNERKALILAKSQEKATALGGVADIEEDLLDEVTSLVEYPNVLTAKFEERFLAVPAEA
                     LVYTMKGDQKYFPIYSKDGKLLPHFIFVSNINPEDPSKIIEGNEKVVRPRLTDAEFFF
                     KTDLKQKLEDQLPRLETVLFQQQLGTLRDKTARIEALAGEIAKQIGADETKAKRAGLL
                     SKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDNLPNSLVAC
                     SVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLPLDLTDLVAKSA
                     QLFGDKLTNKDVVEDVVDFMLGRFRAWYESEGIAVDVIQAVLARRPTKPADFDARVRA
                     VSHFRTLDSAEALAAANKRVSNILAKADIAIGDIDVSACVEPAEKALAEAVIALKAEV
                     QPLIAQGDYTAVLDKLANLRQPVDAFFDGVMVNAEDQKLRQNRLAILSTLQGLFLQVA
                     DISLLQ"
     gene            complement(15968..17269)
                     /locus_tag="PXE50_001172"
     CDS             complement(15968..17269)
                     /locus_tag="PXE50_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine dehydratase subunit alpha family protein"
                     /protein_id="HDL5622096.1"
                     /translation="MNIHCEKLVQSILHAVNHEVVPALGCTEPISLALASAIARQYLG
                     HLPERIEAKVSPNLMKNGMGVAVPGTATVGLPMAAAIGAIGGEPDGGLEVLKNITPEQ
                     VKQAKAMLNTDKVSVSIFETEHILYSEATLFHQANRVCVRIAEHHTNVIYIEKNGQTI
                     LSKPCAVNNDNTTEIFASLSAKDIFNFSMQIELEKIRFIEQAAQLNSALSQEGLRADY
                     GLHIGRTLQKQIGLGLISDDLLNRIVIETTSASDARMGGASLPAMSNSGSGNQGITAT
                     MPIVVVARHLNVTDEQRIRALFLSHLMAIYIHSKLPKLSALCAVTTAAMGSCAGIAWL
                     LTGKFENISMAISSMIGDISGIICDGASNSCAMKVSTSVTSSYKSILMSMDNSQVTGN
                     EGIVEHDIDRSINNLCSIASRSMQYTDRQVIEIMVNKPKLK"
     gene            complement(17283..18560)
                     /locus_tag="PXE50_001173"
     CDS             complement(17283..18560)
                     /locus_tag="PXE50_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622097.1"
                     /translation="MDTQKLSPAEFKQATKFDSTDFGWIIMSIGMAIGAGIVFLPVQV
                     GLMGMWVFLLSSIIGYPAMYLFQRLFINTLAESPECKDYPTVISGYLGKNWGIFLGVL
                     YFIMLVIWMFVYSTAITNDSASYLLTFGITNTLLSDNPFYGLVLICILVALSSRGEKL
                     LFKISTFMVLTKLFVVAALGLAMIGMWQLHNIGAMPPFGKLIKDAIITLPFTLTSILF
                     LQTLSPMVISYRAKEQSREVARYKALRAMNIAFAILFITVFFYAVSFTLAMGREEALK
                     AYEQNVSALAIAAQFFPGSWATYVGVALNIFAVMTAFFGVYLGFREATQGIVMNLLLR
                     KFPAEKINPNYVQKGIMLFSILLAWSAIVLNAPVLSFTSICSPIFGLVGCLIPAYLVY
                     KVPALFKYKGLALNIIIITGILLCISPFLTFLE"
     gene            complement(18589..19257)
                     /locus_tag="PXE50_001174"
     CDS             complement(18589..19257)
                     /locus_tag="PXE50_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HDL5622098.1"
                     /translation="MPDKLEYLHDLDKEIMLSYFSLSEAIAGLLGEFCEVVIHSLNAY
                     EKSVIKIINGHHTNRKIGSPITDKGLQLLKCYQKDQSNTELVYFSRLNNGNLVKSTTH
                     IIIGHEGKPIGLFCINLNLSTPLDKTVSSFMNYDPIPPHYKSENFITHPKELIEETFL
                     KAVTHIEQHTTKHSKLYKKSIIFYLFENGIFELKEAVPIVAEKLSLTSHAIYKHLREF
                     KNNT"
BASE COUNT         5813 a         3758 c         4316 g         5388 t
ORIGIN      
        1 gattttatct tttctattgg ttaatatacc gccatcaagt tcattaattt atttgaggga
       61 ataaacaatg agtcaaaaat atagcgtagc cgtcatcggc ttaggagcaa tgggtatggg
      121 agcagcaaaa tcttgtatcg ctgccggatt agacacatac ggtgtggatc ttaacccgaa
      181 ttatctggaa accttaaaag cagcaggtgc taagaaagtc ggcacaagtg cggtcgattt
      241 tgccgctgaa ttagatgcgg tgttgttgtt ggtggttaat gccaaccaag tgaatgcggt
      301 gttattcggt gaaaacggct tagcccaaca tttgaaacaa ggtacggtgg tgatggtatc
      361 ttccaccatt tctgcacaag atgcaaaaaa tatttcacag aagttaacag atttaggctt
      421 ggtgatgtta gatgctccgg tttcgggtgg ggcagcaaaa gcagcacaag gtgaaatgac
      481 tgtgatggca tcaggttcca gcgaggcatt cgagaaatta aaaccggtat tagatgcggt
      541 tgcaggcaaa gtgtataaca ttggcgaaga agtcggcttg ggtgcaacgg taaaaattat
      601 ccatcaatta cttgccggtg tgcatattgc cgcaggtgca gaagcaatgg cattggcggc
      661 tcgtgccggt attccgcttg atttaatgta tgacgttgta accaatgcgg caggcaattc
      721 ttggatgttt gaaaaccgaa tgaaacacgt tgttgagggc gattacaccc cactctctat
      781 ggtggatatt tttgtgaaag atttgggatt ggtgaacgac accgcaaaat ctttgcgttt
      841 cccgcttcac ttagccagca ccgcttattc tatgtttacc gaagccagca acgcaggtta
      901 cggcaaggaa gatgatagtg cggtcattaa aattttcagt ggtatcgaat tacctaaaaa
      961 agaggggaaa taagatgtta ggcattattg cagacgattt caccggtgcg agtgacatcg
     1021 ccagtttctt aaccgaaaac gggctaaaaa cggtgcaaat gaatggtgtg ccgaaaacta
     1081 cacttaacag tcaagttgat gcgattgtga ttagcctgaa atctcgctct aaccctgtgg
     1141 aagaagcaat ccaacaatca ttacaagcct tagattggct gaaacaaaat ggttgctcgc
     1201 aattctactt taaatattgt tccacttttg acagcacgga gaaaggcaat atcgggccgg
     1261 taaccgatgc cctaatggcg gcattagata ccgattttac cgtagtcaca ccggctctgc
     1321 ctgtcaatgg cagaaccatt ttcaacggct atttgtttgt gggcgatgtg ctactgaatg
     1381 aatctggtat gcgtaaccac ccgattaccc cgatgaaaga tgccaacttg gtgcgtttaa
     1441 tggatgcaca atctcaaggc aaaaccggct tggttgccta tgctgatgtg attcaagggg
     1501 cagagcgtgt gaaagcccgt tttgctgaat tgaaacagca aggctacaaa tatgcggtag
     1561 tagatgctgc cgataattca caacttgcgg tgcttgccga agcggttgcc gattttcaat
     1621 tagtcacagg cggttcaggc ttaggggctt atatggcggc ttaccgttca ggcggcaaaa
     1681 aaggcacgaa tgcgtttgta ccaagcaaag gcaaaaccgt tgtgctttcg ggttcttgct
     1741 cggtaatgac caatacccaa gtggcggctt accagcaaaa agccccaagt tatttcttag
     1801 aagcggaaaa agccattcag gatccgaact atgtagaaac gctttatcaa tgggtgattg
     1861 caaacctaga cggtgacttt gccccaatgg tttatgccac cgttccccct gaaaaattga
     1921 aagagattca aacccaattc ggcggcgata aagccagcca cgccattgaa aatacctttg
     1981 ccaaattagc cgaaaaatta caagccgcag gcgtaactaa ctttattacc gcaggcggtg
     2041 aaacttcgag cattgtggtt cagcaacttg gattcagcgg tttccacatc ggcaaacaaa
     2101 ttgcaccggg cgtgccgtgg ttacaagcgg tcgaaaaacc gatttttctt gcattgaaat
     2161 cgggtaactt cggtaaagaa gatttcttca gttttgctca ggagatgttt gtatgacaga
     2221 acaagaacaa aagattgaaa tggtcaatct tgcccgctcg ctgtttgagc ggggctatac
     2281 cgttggcggt gcgggcaacc tctccgtgcg tttagatgaa aatcgcattt tagttacccc
     2341 aaccggctct tcgctcgggc gtttagaggc agaccgcctt tccgtattgg atatgcaggg
     2401 taatgttctt tcaggagata aaccttcaaa agaatcggta ttccacttgg cgatgtatca
     2461 gaaaaatccg gcttgccaag caatagtgca tctgcattcc acttatttaa ccgcactttc
     2521 ttgcttggaa aatttggata ccgacaacgc tatgcgtgct ttcacccctt actatgtgat
     2581 gcgggtagga aaattgccgg tcattcctta ctaccgtccg ggcgacatca acattgcccg
     2641 agagctgggg gaacgagcct tagacggcaa agccttttta ctggcaaatc acggggtggt
     2701 agtcacaggt tcagacttgc gtgatgcggt ggataacaca gaagagttgg aagaaacctc
     2761 caagctctat tttattctac aaggtcaaaa agtccgttat ctcaccgatg acgaagtcaa
     2821 tgatctgaaa aacagaggaa aataaaatgc ctaaatttgc agcaaacctt acgatgatgt
     2881 ttaacgaagt gccgttttta gatcgttttg aagcggctgc caacgctgga tttaaatatg
     2941 tcgagtattt atggccttat gattatccgg cagcagaatt gaaagccaaa cttgagcaat
     3001 atggcttaaa acaggtgttg ttcaataccg cagccggaga tgttgctcaa ggtgaatggg
     3061 gtgtttctgc cattccgggg cgtgaagctg atagccatcg tgatattgat ttagcgttgg
     3121 aatatgccct cgccttaggt tgtgagaatg ttcacgttat ggcagcggtc gtgccagaag
     3181 gcgaagatcg tgaagcctat aaacaaacct ttatcaaaaa cgtgcaatat gccgccgata
     3241 aattcaaacc gcacggcatt aacgtcttgc ttgaagccct aagccctgaa gtgaaaccga
     3301 attatctgct taaaagccag tttgatacgc tagaaattgt ggaagcggta aaccgagaca
     3361 atgtgtttgt acagcttgac tacttccacg cacagaatgt ggacggcaac ttatctcgcc
     3421 taaccgacaa actcaagggt aaatttgccc acattcaaat tgcccctgtg ccagatcgcc
     3481 acgaaccgga cgaaggggaa attaactacc aatatatctt caacaaactc gatgaaatcg
     3541 ggtatgaagg ctatgtaggt tgcgagtata aaccacgagc ggaaaccacc tcaggactag
     3601 gttggtttga gcagtataaa taaccacgat gattagcgga taaatacgtg aatacaacat
     3661 ttagaaggaa actttatgtc aaatgaaatg ttaattttga ttggattagc aagcgtagtt
     3721 gctcttctgg tcattatgat taaaggtaaa gtacacccat tcttagcatt ggggttagtg
     3781 agtatcgcag ttgccttaac tgcaggtatt ccaatgagta aagtgatccc aaccttgatt
     3841 tcaggtatgg gaagtacttt aggtagcgtt gcactcatag taggtttggg agcaatgtta
     3901 gggaaaatca ttgaaaaatc tcacggtgcg gatgtattag caaattggtt gttacagcgt
     3961 tttggtgaga aaaacgctcc ctttgcatta ggtatgacag gttttatatt cggtattcct
     4021 gttttcgttg atgttggttt tatcgtattg ctcccgatta tttttagtgt agcgagacgt
     4081 ttagggggaa atatccttgt ttattctttg ccaatcgggc ttgcgatgtt acttgttcac
     4141 gttttagttc cacctcatcc aggtattgta gcgggtgctc aaaacttaaa cgcagatatt
     4201 ggctttgtat tgggaattgg cttagtagca gcgctacctg catatttaat cggtcaaaaa
     4261 tttattccgt tctttacaaa aaataatttc gtaaaagtag taacttcaac cgatctttta
     4321 cagcaccaaa aagatttgat taaagagaaa ggcattgaac taccttcttt tggtaaagtg
     4381 ttagcaatga tttctttccc gctaatcctg attatgttag gtacagtaac ggcaacaacc
     4441 ttgccgaaag aacatatcgt gcgtgaagta ttcagtatgg taggaagctc tccgtttgcc
     4501 ttatttgtgg ctgtttgtct ttctgcttat gtattaggtt ttagatacgg ttggactaag
     4561 cataaattag aagaagtact ggagtctgcg ttagcaccga ttgcggggat tattttaatc
     4621 accggtgcag gcggtatgtt cggtaaagtg ttagatgcca gtggcgtagg taaagcatta
     4681 gcagatgtat tagccaacac gggcttaccg ttattggttc tttctttcat actttctgca
     4741 ttattgcgtg cagcacaagg ttctgcaacg gtggcaacta ttactactac aactattcta
     4801 gctcctgcag ctgtagcagc aggttataat gatctgcaat tagcacttct tactgcagct
     4861 attggtgcag gttctatgac attatcccac gtgaatgatt cactcttctg ggtatggacg
     4921 aaattcttca atgttcctgt atccgtaggc ttaagaactt ggacgttttt aacgactatt
     4981 ttcggtgtaa tagcctttgc cgttgttggc attatttgga tgttattcgt ttaatatcac
     5041 tctgttactg cttaaaatcc acctcttatg aggtggattt ttttaggaga aacctatgct
     5101 gaaaaaaaca cttttattta cgctattact ttctcactcc ctctatgcag aggatatgat
     5161 tcaggaaaat aaatcagcga atattacgtt gcttgccgaa atcaccgctc aaggtcaaaa
     5221 aattaacggc gtggcattgg aatatcctga taatgtctta tcaggcagcg atcttcgcca
     5281 actgtatcag gtcaaaacgg cattagatag tgcggagaaa gaaaaccgtt cggtgctcaa
     5341 agcctatgtc aataatgagc caaaagtgac cgcacttccg caagccggta aatttgtgat
     5401 tattgaattg gatacggcag ataaaaatgc ggcaacttat agcgtaaaag atgctaataa
     5461 agcgccgatg aaatttaaat ccaaagatga aaacggcaac attgtagaaa cagagaaagt
     5521 acaagcggtc aaaattccag agttttttgc aaatcgccta atctattcgg cggaacaaaa
     5581 aggcttgctt aaattaacca gcggcacaac tctaggcaag actgaatgga cacaaaccgc
     5641 tgaacccgac aaaatcaaaa ccccttatct cgatgatttt gtcgcaaaac aagtgagctt
     5701 agaccagtct ggaaataaac tgaactaccg tctctattcg cctttgcaaa aaaatggtga
     5761 aaaatacccg cttgtgattt tcctacacgg ttcagggcaa gtcggttcgg ataaccttgc
     5821 tcacctgctt tccagtaaag gggcgattgc caccctgcct tatgccccaa gttttgtact
     5881 tgctccgcaa tacgaccaag tattcgaccc atttgataat gccgccaaag ggcaaaaagg
     5941 cggtattcac tggcaaacgg aaaatcgtat caatctcgtg ttaaaaatga ttgatgaaac
     6001 cctaaaagcc aatcctcaaa ttgataccac acgcatttat atcaatggct tatctcgagg
     6061 tgctgaaggg ggcttaaatc tgttgttggc tcgcccgaat ttctttgccg gagcattatt
     6121 aatgagcggt cgtgaagcct acaccaacga atgggtggac ggcaatgcca ccaaaacgaa
     6181 tttggcggca attaaacata taccgatttg gtttttccat agtaaagagg acaaagtctc
     6241 gccggtaaaa ggttctcgca ttaactaccg cattctcaaa gatgagttaa atgcccccaa
     6301 tgtgaaatat accgaattca cttttgaaca agccggcgac aacggcattg tcaataataa
     6361 ccctcataat acttgggacg ctgtgtataa cagccctgag gtgattgggt ggttacttca
     6421 gcaaaaacgc cactaaggag gctcactgtg tttatgtatt tgtctcaccc gttagatcct
     6481 aaagatttag cttggccggg agaacctgtt gttgaggtga ctcgctgcac agacgtaggt
     6541 gaagaaacgc catttagcag ttttatcacg aaactaccga atcattgcgg cacacatatg
     6601 gacgctcctc gccactttgt gaaagacggt ttaagtatca atgaattgcc gatagagtat
     6661 ttctgccata aagaggtcgc tttaattgaa attcccaaag gagaggcaga agggatcacc
     6721 aaagaagatt tattgcctta tgtcgatatt ctctccaagg tgtcttttgc ctttttacga
     6781 acggggtttg agaaatatag aaccgagaac cctgctattt atcaaaatga atgcccctat
     6841 atttcaaccg gtgccgggca gtatttatct gatactttcc cgaatttgaa aggagtaggc
     6901 attgatttct tggcactagg gtctccttct tcccgagtgc ctgatgcgga aaaccctaaa
     6961 aattgccatc gagcgatttt aggctactat accggcaggt ttaccactgt gattgaagat
     7021 atgcacttag cggaactccc taaaaatgcc aacattaagc agttttttaa tgcaccgtgg
     7081 cgaattaaag ggttagattc cagtcaagtg acttgtattg tggaattaca gcaataaacc
     7141 acagatatat tcattttagg agaggctatt tactatagta agcataactc aatcattaat
     7201 tgaaaataat tattatttga ttttaatcaa gtcattcata acttaatttt gttataaata
     7261 tgaccttgtt tatagcacta ttttgtttcg ataatgatta taaaagatac acactggaca
     7321 tctcaacaag cctctccaaa tgctttccca gaacgacagg cacttatgcc tatttggggt
     7381 gggaaaaata ttgaacgcaa tcaatggcaa tctttatggc tggaacaagc accaaatgcg
     7441 ttattacagg atggtttagc ttatttccat attccgtttt gcgctagtca ttgtattttt
     7501 tgtggttttt atcgcaatgc ttggaaggaa aattatagcc agatttatac tgatcgtgtg
     7561 attagtgaac ttcgatatga atcttcacta tggcgaggac aaggtaagat tcatgccgtt
     7621 tattttggtg gaggaacgcc aacagcgtta catacagaag atttagtacg attgattcga
     7681 gcttgttatc gttatttgcc actcgctgaa gactgtgaat ttactattga gggtagaatt
     7741 agccattttg atatagataa ggctaaggct tgtattgaag caggcgtgaa ccgtatttct
     7801 attggtattc agacttttaa ctccgaaatt cgcaaacgtt tagggcgcaa acatagtggc
     7861 gaagaggctc aaacttattt aaaagcctta tcggaattaa atgctgtgat tgttgctgat
     7921 ttaatttttg gcttgccaaa ccaaacagat gatatctggc aaaacgatat tgaaattgcg
     7981 actagtttac cgatctcagg cttagatatt tacgccttta ataattatcc tttcctgcct
     8041 attaatcgct taattgaaca tggaaaatta cctgcgcccg cagggtttga cacccaaagc
     8101 ttacactatg cttatgcagt agagaagtta aaagcacaag gttggcagca agtgagcaat
     8161 aaccactttg cttttccaaa tcgaggtgaa cgcaatcgct ataatacttt ggttaaatcg
     8221 aatatgcctt gtttggcatt tggctccggt gcggggggaa attttggtgg gctgagttac
     8281 caagtacaat ctgatttaaa gacctactta gattcgcctc ttgatcagaa aagcctttct
     8341 tttttgagta aacatggtga acataaagca ctgcttggtg tgatacaaca tagcatggaa
     8401 ttgggttact tagatacaac gccttttgaa caaaatgcga aagctgaaaa attattgcaa
     8461 caatgggaag cgcttgattt actgaagcgt gaaaaaaatc aagtatatct caataccagt
     8521 ggtcgttact ggtcaccaac attaattcgt aaactaatgt taacacttcc tcaatcaagt
     8581 aaggataaca acatgataac gccattaact aaagaattag aaaataaatt gcggacaaat
     8641 ttaaaagaaa acccagggca aattttagaa atgctggcag gaatgaatca atgtagcttg
     8701 gaatcggtaa ttaactgtct gcccaaagaa atggtaatgc aaacaggtgg tgagcgtttt
     8761 gtggaaatta tgcaggcaat tgctggttgg aatgaagctg tgacttttat tattcatacg
     8821 cctgatgcga ttgcagaggt aactgctaaa ttgccacaag gtaaaattgg gcgaggtttt
     8881 tataattttg aacatggtgt agatggagga attcacggtc atttacgcta tgaaaattgt
     8941 gctgctattt acttacttga tcgcccattt atgggaaaaa gaacggtggc gttaactttt
     9001 atcaatcaaa gcggtgaggc gatgtttaag atttttgttg ggcgtgatga acaaggtcaa
     9061 ttacgagaaa atcagattca agccatgcgg aaattaattg gaggatgcta gtcatgattt
     9121 tggtttgtgg ggcaaatggg ttgttaggac gagcaatctg tgacaaatta cctagagaga
     9181 aaacgatagc cgtcttacga aaagatgcta tggatacgtt tttcagcgaa cgaaatatag
     9241 cagtagaaat agcagattta ttagatttgg aatcctgcaa cgccttgtta caaaaaacac
     9301 aaccggaaat cttgattacg gtagtaggag gaaaaaatga acaaggtatt cgtagcgaca
     9361 aaacagcaaa tattaatttg ataaaagcag ttgaaaaata ttcaccaact acgaaagtag
     9421 ttttagttac tagtgttggg tgtgcagaac aatgggattt aattagccca ttagcacagc
     9481 aagctttagg tgaagcacta aaagccaaga cggaagctga agcttattta cagcaaacag
     9541 cattaaattg gctgattatt cgacccggtg ggttaaataa tgatgaagta aatgatgagt
     9601 atcagattgt gcgtgattta cctaatgaac ggaaaatgta tgtaagccgt aaatctgtcg
     9661 caacaggcat agtgcgttta ctggatagta cggaaaatca tcaaatcttc tctattatta
     9721 ataggggata gtatatttca acgaaggcaa gcgggcatat tttatggtta ttttgcaact
     9781 ataaaacaga ccgcttgtga gatctttttc tattttattg agaactggat gccgcattca
     9841 tctgcaagta gcgaagcacc tttttctggg tagcttcgtc catatcggta aaaccgacca
     9901 ttccgttaaa tactgcaatc cattcgtttg catcatgcat tttaggatca cgttgtttat
     9961 ggcacacgct gcattctgtt ttataggtat ttttggtgtt cgcccaaaag ttagtgagat
    10021 cttgggtaaa ttcggcattt tccacccaca cgttcatttt cactttttgc cataccaagc
    10081 cggtgttcgg atcttccttg ctctctacaa tctctaacag tgggttgttg ctgataaaag
    10141 atttctcaaa taccgcatcg gtaatatttt tactgaaaga atgataccaa atccgcccga
    10201 aacctttgct ttttcgccat aaattcagct caatttcagc ggcttttgcg gttgtttgca
    10261 ccaatttaat ttctgctccg gcttctagct gcccgatttt ctgtgtcaaa ttttcatcgg
    10321 caaataaagg gattgtttcc gtggtgtaac tgtttgaacc ggcaaaacaa aatgttggca
    10381 tgatgaatgc caagaaacag aaagcgattt tcgataatga tttcatcata aaccccacaa
    10441 attagatgag aaattaggtt atatgttaca caaattgagc aaaaaagcgt tgatttacat
    10501 cataaaactg attttatgtc gatttcttaa ttttttgcaa aaaaatccca aaaaatgact
    10561 gcttacaagc tataataacc agtatttttc gaccattttt caaattcaag agaaaataaa
    10621 atgagtacaa aattcaacgt aaaaaccttt caaggaatga ttttagccct gcaagactac
    10681 tgggcaagca aaggttgcac cattgtgcag ccgttcgatt tagaagtggg ggcaggcacc
    10741 tcgcacccaa tgacctgcct gcgtgcgctt ggccctgagc caatggcgtt tgcctatgtg
    10801 caaccatctc gccgcccgac agacggtcgc tacggcgaaa atccgaaccg tttacagcac
    10861 tactaccagt tccaagtggt gattaaacct tcgccggata acattcaaga actttacctc
    10921 gacagcctga aaatgctcgg tttcgaccca acccaaaacg acattcgttt tgtggaagac
    10981 aactgggaaa acccaacgct tggggcgtgg ggcttaggtt gggaagtgtg gctgaacgga
    11041 atggaagtga cccaattcac ctacttccag caagtcggcg gcttggaatg taaaccggtg
    11101 acaggcgaaa tcacctacgg cttagagcgt ttggcgatgt acattcaagg cgtggacagc
    11161 gtgtacgacc tcgtgtggtc tgacggcgaa ctcggtaaaa ccacctacgg cgacgtattc
    11221 caccaaaacg aagtggagca atccacctac aactttgaat acgctgatgt ggacttcctg
    11281 ttccaatgct tcgagcagta cgaaaaagaa gcccaatacc tgttaggcct agaaaaacca
    11341 ttgccattgc cggcatacga acgcatttta aaagccgctc acagctttaa cttattagat
    11401 gctcgtaaag cgatctcggt aactgaacgc caacgctaca ttctacgcat tcgtgcctta
    11461 accaaaggcg ttgctgaagc gtactatgcc agccgtgaag cgttggggtt cccggggtgt
    11521 aaaaaataat cgtagggacg ccacgcttgg cgtccgtcaa taaattacaa aacggacacg
    11581 aagcatcgtg tccctacaag gatttacgat gaaaccgatt ttatacttcg ccgattggtg
    11641 tccggatacc gccccatttg tggcagaact agaccgcttg ggcattgaat atgagccgtg
    11701 cgacatcacc aaaggaggct caacacttaa accatttttg aaactgcgag acacgcattc
    11761 tgcctttgac cacgccaaag ccaacggcta tattggcatt ccggcattgc tgatcgaagg
    11821 cgaaaaagtc gtgctggatt tggctgaatt agagggtatt ttcggctaac aagcggttga
    11881 atttggcgga aatgttgcaa aggagccaat aatgaagaca gtaatagcag ataattcggc
    11941 tgaatttgtg aatgaaattt cacaacttat tcaatcgagt aagcaacgaa tgaccgttgc
    12001 ggttaatgca gaattaacct tgctttattg gcatatcgga aaacggatca atgactatat
    12061 tttgcagggt gaacgtgcgg aatatgggca agaagtggtg aaaaatcttg ctcaaagtct
    12121 gacggagcaa tttggtaaag gttggagtaa acgccattta aattatacaa tgcaatttgc
    12181 tacaactttc cctaatttgg aaattgtgca cgcactgcgt gcacaattaa gctggacaca
    12241 ttttaagcag attattcata ttgatgatcc aacaaagcga gggttctatg caacaatggc
    12301 tgcacaggag cgttggagta caaggacatt agaagatcgc attggctcat tattgtttga
    12361 acgcacggca atttccaaaa agcccgatga aaccattatt gctgaattga gtttgctacg
    12421 tgaaaaaggc gaatataatc agtcaatggt gttgaaagat ccctatattt tggattttct
    12481 cgaccttaac gaccgttata tggaacgtga tctcgaagat gcgattctac gagagatcga
    12541 acagttttta ctggaacttg gggcgggttt tacctttgtc gcccgccaaa aaaggattca
    12601 gattgataat gatgatttct atatcgatct gctgttttat aaccgtaaac tcaaacgcct
    12661 gattgcgatt gaactaaaaa ccgaaagctt caaacattcc cacaaaagtc aaatggaact
    12721 ctatttggcg tggctggcga aatacgagca agaagcagac gaaaacccac cgcttggaat
    12781 gattctctgc accggtaaaa agcaggagca agtggaattg ttggatttga aaaattccga
    12841 tattcatatt gcggaatata tgaccgtgtt gccgagtaaa gcggtattgg aacaacggtt
    12901 gcatttggcg gtggaaaggg cgaaagagcg gtttttacta aaatagcaag cggttaaaat
    12961 cagcggaaat gttgcaaaat gaaagtatga tggaaacgat ttggttgcat attccgttgg
    13021 tgggtggtta gagattttca aatctccccc ctccccctct ttggctaaag agggggcgat
    13081 catttagtga gtaattttaa ttcatctgac tatttacaat cttaatgaag aaagatgaat
    13141 tataaattta cgaagatcaa attccccttt ttagcaaaga ggggctaggg gagatttggc
    13201 agaagtgaaa acgtagtgag agattgatta gtctagtact tttttgcaag ttaatcataa
    13261 agttgctctc atttcttgat aagtacaata aaagcaaaga aaaggatata ataaaggaaa
    13321 tatatgtcaa ttaaaaaatt attatctaca actatagatc aacttgagaa tataatacaa
    13381 gtatcgggcg aaagtttcga aaaaattaca agtgacttag cagaaaaagc aaaagaatta
    13441 aattcagaat ataatattaa atgtgaaaaa ttgggatacg ccataacatt atttgaaaaa
    13501 aactcggaaa tagaaaaacg ctacatatca ttattatctg actttgatat ggatacaagt
    13561 ataaaaggat ttgaaaaatt gtctctacta atgaatggca agaatgataa tgctagaaaa
    13621 gaagctgaag aacattttaa tgaattacaa aatgggctat tagaagctca agattataaa
    13681 aaagatttag acatcaaaat taggaaatta gctagagagc tttataatga aaatatagca
    13741 caattagaaa tagaagaaat caaagaacat ttatataaaa attggtaatt taaacaatga
    13801 caacacaaaa cttccttgcc gagatcggca cagaagagct gccaccgaag gcactcaaaa
    13861 aattagcgac cgcatttgcg gagaatgtag aaaacgaatt aaaccaagca ggtctttcgt
    13921 ttgagaaagt ggaatggttt gctgctcctc gccgtttggc ggtgaaggtg ttgagccttg
    13981 cggaaagcca gccgagtaaa gaggttgaga aacgagggcc ggcggtgtcg gcagcgtttg
    14041 atgccgaagg caagccgact aaggcagcgg aaggctgggc gaagggctgc gggattaccg
    14101 tagagcaagc tgagcgtatt gccaccgaca aaggcgaatg gttggtgcat cgtgccgtga
    14161 ttgaaggtca gccgactaaa aatctgttgg tcgatattat cgccaaatcg ctggcgaact
    14221 tgccgattcc aaaaacgatg cgttggggcg ataaaaccga gcagttcgtc cgccctgtgc
    14281 ataccgtgac acttttattc ggggcggagt tgatcgaagg tgagatctta ggcgtgaaaa
    14341 gcggccgtac tattcgtggt caccgtttct taggtgaacg tgagttccaa attgagaacg
    14401 ccgatcaata tccgcaactg ttgaaagatc gtggatctgt ggtagcagat ttcaatgagc
    14461 gtaaagcctt aattcttgca aaatcacagg aaaaagcaac cgctttgggt ggcgttgccg
    14521 atattgaaga agatttgctg gacgaagtga cctcgttggt ggaatacccg aacgtactca
    14581 ccgccaagtt tgaagagcgt ttccttgctg tgccggcgga agccttagtt tacaccatga
    14641 aaggcgacca aaaatacttc ccgatttatt caaaagacgg caaattgtta ccgcacttta
    14701 tttttgtgtc gaacatcaat ccggaagacc caagcaaaat catcgagggt aacgaaaaag
    14761 tggttcgccc acgtttgacc gatgcggagt tcttcttcaa aaccgactta aaacagaagt
    14821 tggaagacca actgccacgc cttgaaaccg tgttgttcca gcaacagctt ggcacattgc
    14881 gtgataaaac cgctcgcatt gaagcgttgg caggtgaaat tgcgaagcaa atcggggcag
    14941 atgaaaccaa agcgaaacgt gcaggtctcc tctcaaaatg tgacctgatg accaatatgg
    15001 tgtttgaatt tactgatacc caaggcgtga tgggtatgca ctatgcccgc cacgacggtg
    15061 aagatgaaga agtggcggtg gcgttaaacg agcagtatat gccacgtttt gctggcgata
    15121 acttgccaaa ttcattggtg gcttgctcgg tggcgttggc ggacaaattt gacacgctaa
    15181 cagggatttt cggcattggt caagccccga aaggcagtgc cgacccgttc gccctacgcc
    15241 gtgcggcact tggctcgttg cggattattg tggagaaaaa tttaccgctt gatttaaccg
    15301 atttagtggc gaaatctgct caattatttg gcgataaact caccaacaaa gacgtggttg
    15361 aggacgtggt ggactttatg ctcggccgct tccgtgcgtg gtatgagagc gaaggcattg
    15421 cggtggacgt gatccaagcc gttctcgccc gccgtccgac caagcctgcc gacttcgatg
    15481 cccgtgtgcg tgccgtgtct cacttccgca cccttgacag tgccgaagcc ttagccgcag
    15541 cgaataaacg ggtgagtaac attcttgcca aagccgatat tgcaattggc gacattgatg
    15601 tttcagcttg cgtagagcca gcagaaaaag cattagccga ggcggttatt gcgttgaaag
    15661 ccgaagttca accgctgatt gcacagggcg actacaccgc tgtgctggat aaattagcga
    15721 acctccgcca accggttgat gccttctttg acggagtaat ggtaaatgca gaagaccaaa
    15781 aactgcgtca aaaccgcctc gccattttaa gcacgctaca aggcttgttc ctgcaagtgg
    15841 cggatatttc gctgttgcaa taacaataag tttgcaataa ttgcaaaatt ttaatgaaaa
    15901 tagaccgctt gcagtaattg tgatctgcaa gcggtctttt ttgcttgaaa ttttaccaaa
    15961 ggcgggatta tttaagtttt ggtttattca ccataatctc gatgacttgg cggtctgtgt
    16021 attgcatact acgagaggca atgctgcata agttattaat tgaacgatca atatcgtgtt
    16081 cgacaattcc ttcgttgcct gttacttggc tattatccat agacatcaga atggatttat
    16141 agcttgatgt tacgctggtg gagactttca tcgcacaact gtttgaagca ccatcacaga
    16201 taataccgct aatatcgccg atcatactac taattgccat actgatattc tcaaatttcc
    16261 ctgtgagcag ccacgctatg ccggcacagc ttcccatagc cgcggttgtt acggcacaga
    16321 gtgcagataa tttcggtaac ttgctgtgaa tataaattgc catgaggtgt gataaaaaga
    16381 gtgctctaat gcgttgctca tcagtgacat ttaaatggcg ggcaacgaca acaatcggca
    16441 tagttgctgt aattccttga ttacctgaac ccgaattgct catagcaggt aaacttgcac
    16501 cgcccattct agcatcagag gcagaggtgg tttctataac aatgcgatta agcaaatcat
    16561 cactgattag acctagacca atctgttttt gcaatgtcct tccgatatgt agcccataat
    16621 cggcacgtaa tccttcttgt gagagtgcgg aatttaattg tgctgcttgc tcaataaagc
    16681 gaattttttc caattcgatt tgcatagaaa aattaaatat atcttttgcc gaaagtgaag
    16741 caaagatctc agtagtatta tcgttattga cggcacaagg tttgcttaaa atagtttgcc
    16801 cgtttttttc aatgtaaatg acattggtat ggtgttcagc aatacgaaca catactcgat
    16861 tcgcttggtg aaatagtgtt gcttcagaat atagaatatg ttctgtttcg aaaatagaga
    16921 cagacacttt atcggtattt aacatagctt tagcttgctt aacctgttct ggcgtaatat
    16981 tttttaatac ttctaatcca ccatcaggct cccctccgat tgctccaata gctgccgcca
    17041 taggcaatcc gacggttgca gttcccggta ctgctactcc catcccattt ttcatcaagt
    17101 taggggaaac ttttgcctca atacgttctg gtaaatgacc taaatattgg cgtgcaatgg
    17161 cggatgcaag ggcgagagaa ataggttctg tacagcctaa tgcagggaca acttcatggt
    17221 tgactgcatg taaaatggat tgtactaatt tttcgcagtg aatattcata gataaaacct
    17281 tattactcta aaaatgtgag gaatggagaa atacataata aaatgccggt aatgataata
    17341 atattgagtg ctagcccttt atatttgaat aatgcaggca ctttatagac taaataggcc
    17401 ggaatcaagc acccaactaa gccaaaaata ggactacaga ttgaggtaaa gcttaaaacc
    17461 ggtgcattta atacaatcgc actccaagcc agcagaatgg aaaataacat aatccctttc
    17521 tgcacataat taggattgat tttttcagcc gggaattttc ttaataatag gttcatcaca
    17581 atgccttgag tggcttctct aaaacctaaa tataccccga aaaaggctgt cataacggca
    17641 aaaatattta atgcaacacc tacataggtt gcccaactac cagggaaaaa ttgggctgca
    17701 attgctaatg cggaaacatt ttgctcgtat gctttgagcg cttcttctct ccccattgca
    17761 agtgtaaaag agacagcgta aaaaaaaacg gtaataaata agatagcaaa tgcaatattc
    17821 atcgctcgta gggctttata gcgcgcaact tcacgagact gttctttagc acggtaagaa
    17881 attaccattg ggctgagagt ttgcaagaag agtatagagg ttagggtgaa aggaagggta
    17941 atgatggcat cttttataag tttgccgaaa ggaggcattg caccgatatt atggagttgc
    18001 cacattccaa tcattgcaag ccctaaggcg gcaacgacaa atagcttagt taataccata
    18061 aatgtagata ttttaaacag tagcttttcg cctcgagaag ataaggcaac taatatacag
    18121 attagcacta agccataaaa tggattatca gagagtagtg tattggtaat gccgaaggta
    18181 agaagatagg aggcactgtc gtttgtaatt gcggtagaat aaacaaacat ccaaatcact
    18241 aacataataa aataaagtac acctaaaaag attccccagt ttttgcccag gtagccacta
    18301 ataacggtgg ggtaatcttt gcattccgga gattctgcta aagtattaat gaacagacgc
    18361 tgaaaaaggt acatcgccgg gtatccgata atagaagaaa gtagaaaaac ccacatgccc
    18421 ataagtccta cttgtaccgg taaaaagacg atgcctgccc cgatagccat accaatactc
    18481 ataatgatcc agccgaagtc ggtagaatca aattttgttg cttgtttaaa ttcggcaggc
    18541 gagagttttt gagtatccat agagtctcct taaatcgtaa cagtataatt aagtgttatt
    18601 tttgaattct cttaaatgtt tataaattgc gtggctggtt agggagagtt tttctgccac
    18661 aataggtact gcctctttta gctcaaagat gccattttca aacaaataga agataatgga
    18721 tttcttatag agttttgaat gtttggtagt gtgttgctca atgtgagtaa ctgcttttag
    18781 aaaggtttct tcaataagtt cttttgggtg agtaataaag ttttcacttt tataatgagg
    18841 cggaatagga tcgtaattca taaaagagct aacggtttta tctaatggtg tcgataaatt
    18901 taaattaata caaaataatc cgataggttt gccctcatgc ccgataataa tatgcgtggt
    18961 ggacttaact aagttaccgt tatttaaccg tgaaaagtaa accagctcag tattagattg
    19021 atctttttgg taacatttta gtaactgtaa tcctttatct gtaataggcg aacctatttt
    19081 tcggttagta tgatgtccgt taatgatttt aataacggat ttttcatagg cattcaatga
    19141 atgaataacc acctcacaga attctcctaa taaccctgct attgcttcac ttaatgagaa
    19201 ataagacagc ataatttctt tgtctaaatc atgaagatac tctaatttat ctggcataac
    19261 ttttactcca atttt
//
LOCUS       DANLZQ010000036        18843 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.036, whole genome shotgun sequence.
ACCESSION   DANLZQ010000036 DANLZQ010000000
VERSION     DANLZQ010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 18843)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18843)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18843
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.036"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            28..2463
                     /gene="plsB"
                     /locus_tag="PXE50_001175"
     CDS             28..2463
                     /gene="plsB"
                     /locus_tag="PXE50_001175"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsB"
                     /protein_id="HDL5622099.1"
                     /translation="MSGLLNFYRAFLNLPLSLLVKSRSIPTHPVAELELNLEQPIVYV
                     LPYTSQTDLLILQKNCLALNLPDPLQENVIEGQTLLRFVFLDEGRRFFKSKGAKSETE
                     SIFYRYLDLHRANAELDVQLVPVSVLWGRAPGKEDARHLQVLTSFQRFLSMVWFGRDN
                     FVRFSPAVSLRYMVTEYGADEKIAQKIARVAKMHFAKLRYSAMGPRLPNRDAMFNKIL
                     NSEVIQAAIAEEAKKSSPEKARKEAEKIINEIAADVKHESLRVADRVLSWLWNKLYQG
                     INVQNADRVRKLALEGHEIVYVPCHRSHMDYLLLSYLLYHQGLVPPHIAAGINLNFWP
                     AGPIFRSWGAFFIRRTFKGNRLYSTIFREYLAELFYRGYSVEYFIEGGRSRTGRLLEP
                     KTGMMSMSLQALQRGLNRSLSIVPVYIGYEHVLEVDTYAKELRGAAKEKENAGLVLRV
                     LKKLKNLGQGYVNFGEPILVNNYLNQYFPEWKEPSEDGRPKWLNEAVDNISHQVMVNI
                     NKAAAVNAKNLVGSALLASRQRALTREQLIEQLGSYIQLFRNVPYSKDMTLPTESAEV
                     MLNHVIHLPRSGVLIEKDNFGELVRLERESAVLMTYYRNNVQHLFVLPSLVASMVLHH
                     EAVSKDVVIKSVNRIYPFLQAELFLHFKQEELKAHIEAIIAELSRQGVIKNESDMLMI
                     NRSHIRTLQLHSAGVREILQRYYISLSVLLEQPNISRGYLEKESSSIAQRLSVLHGIN
                     APEFFDKAIFSTFTSSLKAQGYFDGDDNLAIAKVKETESLLRSLISIEVQQTIQGAMA
                     KVAESVENPNIAG"
     gene            complement(2568..3131)
                     /locus_tag="PXE50_001176"
     CDS             complement(2568..3131)
                     /locus_tag="PXE50_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate uptake transporter"
                     /protein_id="HDL5622100.1"
                     /translation="MSAPNSGTNPAPLGLCGFALTTFLLSLINNGTFSGENVGLVLAM
                     GFAFGGTSQMIAGMFEFAKGNTFGFTAFTSYGAFWWSFALFKVFFAANVSAEFVGWYL
                     VAWGTFTLMMFIGTLAKARALQAIFLSLTITFYLLAAGDFTHNTTLTNIGGNFGLLTA
                     FLAFYLAAADIINESFGKTVLPIGEPK"
     gene            complement(3329..4225)
                     /locus_tag="PXE50_001177"
     CDS             complement(3329..4225)
                     /locus_tag="PXE50_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5622101.1"
                     /translation="MDILDRLLAFAQISAGISVKCQLQGDWQLENPHQTGQAIAHIIS
                     YGQAYLQHNGKTHHLKQGDIVFFPRFADHTLRSQIQPLTSKNAVNPEQLGAFTLTQAG
                     LSQSECDMFCLHFYYDHQAELMESLPEMIVFQVAETPLKAMLDILKQEAETPNLAVKS
                     VVNSLAVVILTMILREHLVNHNNQLFGILKGWQDLHLRPLIKAILLNPEHEWQVDDMA
                     AFIHLSRAQLVRLFNKHLCISPHAFVHKIRLQKAAMLLKSQAGSVLSIALSCGFQSES
                     HFITAFKKQYCVTPSQYRQLNP"
     gene            4361..4702
                     /locus_tag="PXE50_001178"
     CDS             4361..4702
                     /locus_tag="PXE50_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HDL5622102.1"
                     /translation="MSSFQNWTEHTAHVKQSFGKLGQKHPKMLEAYKALGTAAAAEAL
                     DHKTRELIALAVAITTRCESCISVHAEEAAKAGATESEIAGALATAIALNAGAAYTYA
                     LRALEAVEEQK"
     gene            4713..5066
                     /locus_tag="PXE50_001179"
     CDS             4713..5066
                     /locus_tag="PXE50_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HDL5622103.1"
                     /translation="MKKLAWILGFAAMMPMMSSAKQASVQQVQAEKAAGIWIDVRSAE
                     EFQQGHLNGAINVTHTEIAQRIAEVAPDKNQPIHLYCRSGHRAEAALNELKKLGYSNV
                     TNHGGYDDLIKAGLK"
     gene            5126..5764
                     /locus_tag="PXE50_001180"
     CDS             5126..5764
                     /locus_tag="PXE50_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005719747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgB family protein"
                     /protein_id="HDL5622104.1"
                     /translation="MSAFNNFVNFVANIVAPMQRQFINFVRIAICIVMVWIGGLKVCQ
                     YEADGIAHFVSNSPFFSYMYKKGPNLVDDGTGKMVMEYTLHKNPEGKMVAKNIEWHKE
                     NGTYTASYIIGATIVTVGLLTLSGIWFPVSGMAGGLLTFGMSIVTLSFMITTPEIWVP
                     NLGGDMPTPAHGFPYLSAVGRLIVKDVIMMAGGLVAAAECANRILARRKAIA"
     gene            5899..7080
                     /gene="purT"
                     /locus_tag="PXE50_001181"
     CDS             5899..7080
                     /gene="purT"
                     /locus_tag="PXE50_001181"
                     /EC_number="2.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005615456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate-dependent phosphoribosylglycinamide
                     formyltransferase"
                     /protein_id="HDL5622105.1"
                     /translation="MTTIGTPLRTNATKVMMLGSGELGKEVVIELQRLGVEVIAVDRY
                     DNAPAQQVAHRAYTISMLDGNALRDLVEKEKPDFIVPEVEAIATATLVELEQEGYNVI
                     PTAKATQLTMNREGIRRLAAEELGLKTSPYRFVDNFEQFQQAIQEIGIPCVVKPIMSS
                     SGHGQSVIKSEADIQQAWDYSQQGGRAGGGRVIVEGFIKFDYEITQLTVRHIHGTSFL
                     APIGHIQVDGDYRESWQPQQMSDIALKKAQETAEKITSALGGRGIFGVELFVCGDEII
                     FNEVSPRPHDTGIVTMASQELSQFALHARAILGLPIPEIYRISPAASKAIVVEGKSDN
                     VRFGGVDKVLAEIGTNIRLFGKGEVNGHRRLGVILARDENTVRALEKARRAYDKLDIQ
                     L"
     gene            complement(7172..8665)
                     /locus_tag="PXE50_001182"
     CDS             complement(7172..8665)
                     /locus_tag="PXE50_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005556599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HDL5622106.1"
                     /translation="MFKQLQQVGKAFMLPIAILPAAGLLLGIGGALSNKATVQAYPIL
                     DNPTLQGIFQIMASAGSVVFGNLALLLCIGLGIGLAKRDKGVAALAAVVGYLIMTGTI
                     SALIPLFPPETKGIDTGVIGSLVMGLITVKLHNKYHNIQLPQILGFFGGSRFVPIVTA
                     FAAIFVGAVFFLIWPAFQQWLVSAGQGIAEMGEIGTFFYGFLMRLSGAVGLHHMIYPL
                     FWYTELGGTEVVNGETIIGAQKIFFAQLADPTHQGLFTEGTRFFAGRFDTMMFGLPAA
                     CLAMYHAVPKARRGAISGLFLGAALTSFITGITEPIEFMFLFVAPWLYVFHAFLDGVS
                     FYIADLLNISIGNTFSGGVIDFTLFGILQGNENTNWLRVIIVGLPWAALYYFSFLFLI
                     KKFNVMTPGRAEESEEVVEQQTSSLTENAHKIIAALGSANNIENVDACITRLRVAVKE
                     VKAVDKATLKKLGAIDVLEVGGGVQAVFGAKAVLYKSEVNQILGKED"
     gene            8866..10713
                     /gene="ilvD"
                     /locus_tag="PXE50_001183"
     CDS             8866..10713
                     /gene="ilvD"
                     /locus_tag="PXE50_001183"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012055207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HDL5622107.1"
                     /translation="MPILRSATSTQGRNMAGARALWRATGMKENDFGKPIIAVVNSFT
                     QFVPGHVHLKDMGQLVAAEIEKAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRDLIAD
                     SVEYMVNAHCADAMVCISNCDKITPGMLMAAMRLNIPTIFVSGGPMEAGKTKLSDQLI
                     RLDLVDAMIESADPNVSDERIDAIERSACPTCGSCSGMFTANSMNCLTEALGLSLPGN
                     GSMLATHADRKELFLRAGREIVELCRKYYQQDDESVLPRSIATFDAFENAMSLDIAMG
                     GSSNTVLHLLATAQEAGVDFKMEDIDRLSRVVPCLSKIAPNTNKYHMEDVHRAGGIMG
                     LLGELDRAGLIHRHVKTVLGLTIEEQLNQYDIIRNKDEDLHKFFRAGPAGIRTTKAFS
                     QDCRWDTVDDDRVNGCIRNVENAVTKEGGLAVLFGNIAEDGCIVKTAGVDESIWKFTG
                     TAIVFESQEDAVAGILGGKVKEGHIVIIRYEGPKGGPGMQEMLYPTSYLKSMGLGKKC
                     ALLTDGRFSGGTSGLSIGHASPEAASGGAIALINDGDTVAIDIPNRSINLMVSDEELA
                     ARRAEMEARGDKAWQPLKREREVSFALKVFGHFATSADKGAVRDKSLLK"
     gene            complement(10847..11197)
                     /locus_tag="PXE50_001184"
     CDS             complement(10847..11197)
                     /locus_tag="PXE50_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TusE/DsrC/DsvC family sulfur relay protein"
                     /protein_id="HDL5622108.1"
                     /translation="MWHFYLMTIELNNIQYPTDASGYLTNLNDWSVELAEKIAEKEQI
                     SLTAEHWEIIYLVRDFYQEYKTSPAIRMLVKTMAQKFGEEKGNSRYLQRLFPDGPAKQ
                     ATKIAGLPKPAKCL"
     gene            complement(11226..11891)
                     /locus_tag="PXE50_001185"
     CDS             complement(11226..11891)
                     /locus_tag="PXE50_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BAX inhibitor protein"
                     /protein_id="HDL5622109.1"
                     /translation="MENRLAHSYSTGESLISTHKVLRNTYMLLAMTLTFSAVVAFVAI
                     QMNAPAMPWWGLLVGFYGLLFLTNATSNSSAGILSVFALTGFLGYTLGPILNRYIGAG
                     LGDIVALAFGATALVFFACSAYVLTTKKDMSFISGMMVALFVVLLVGIIANIFLAIPA
                     LSLALSSLFVIFSSGAILLATSNIIHGGETNYIRATVDLYVSIYNLFVSFLQIFGVLG
                     SDD"
     gene            12097..12645
                     /gene="pgsA"
                     /locus_tag="PXE50_001186"
     CDS             12097..12645
                     /gene="pgsA"
                     /locus_tag="PXE50_001186"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HDL5622110.1"
                     /translation="MKLNFPTYLTLFRVGLTPLFIVAFYLPTKYAPEISTLIFFIASI
                     TDAFDGYLARKWNQTTRLGAFLDPVADKVLVAVAFVCVAEYYHTWWITIPICIMIARE
                     IIISALREWMAELGERASVAVSIWGKVKTTAQMLALGGMLWRQNQLMEILAFILLYIA
                     VGLTIWSMMQYLNASKNSLLKS"
     gene            12723..14561
                     /gene="uvrC"
                     /locus_tag="PXE50_001187"
     CDS             12723..14561
                     /gene="uvrC"
                     /locus_tag="PXE50_001187"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HDL5622111.1"
                     /translation="MSEFNAKSFLLNVPHQPGVYRMYDSKGTIIYVGKAKDLKKRLAS
                     YFRSQLSSKKTEALVANLANIETTITHSETEALLLEHNYIKENQPKYNVLLRDDKSYP
                     YILLTKHKHPRLTAFRGSKKIAGEYFGPYPNVTAVRETLNLLQKIFPIRQCEDTYYKN
                     RSRPCLQYQIGRCLAPCVEGCYSPVEYDQQVNLVRLFLQGKDHQVVEHLVQKMEDAAE
                     ALDFEGAARFRDQIQSVRAVQEKQFVSNDRLDDLDIISIVYQNGIACVHILFVRQGKV
                     LGNRSYFPKVPSNTDLTELADTFVGQFYLQMNQHRTIPNQIVIDHQLSESKALSEILS
                     EQAGHKVSILDNAIRGDKQRYLALARTNAMAALVLQLKQESHIQSRYQALKEMLKMSE
                     IKRMECFDISHTMGNQTVASCVVFDENGPLKSDYRRFNIEGITGGDDYAAMEQALLKR
                     YNRELPPEKIPDIIFIDGGKGQLNRALDVFAKLDVEWDKSKPLLIGVAKGVERKAGLE
                     TLIISKWDKEIHLPPDSLALHLIQHIRDESHQHAISGHRKKRQKAFTESGLESIAGVG
                     AKRRQALLKYLGGMQGVKSATLEEIQSVPGISKALAEVIFDTLKNS"
     gene            complement(14566..14841)
                     /locus_tag="PXE50_001188"
     CDS             complement(14566..14841)
                     /locus_tag="PXE50_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622112.1"
                     /translation="MKKLILLGLSVALTACSTPQQQSTVPMDMQAVQDYHQRVINKQT
                     VDKNTKQHDEPLNQSDKRSESINLPIHPIIYPSIGVGYHYGWKRYRY"
     gene            complement(14966..15319)
                     /gene="rplT"
                     /locus_tag="PXE50_001189"
     CDS             complement(14966..15319)
                     /gene="rplT"
                     /locus_tag="PXE50_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009635878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HDL5622113.1"
                     /translation="MARVKRGVIARARHKKVLKAAKGYYGARSRVYRVAFQAVVKAAQ
                     YAYRDRRQRKRQFRQLWIARINAAARQNGLSYSKFINGLKKASVEIDRKILADIAVFD
                     KVAFAALVEKAKSAL"
     gene            complement(15428..15625)
                     /gene="rpmI"
                     /locus_tag="PXE50_001190"
     CDS             complement(15428..15625)
                     /gene="rpmI"
                     /locus_tag="PXE50_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006708231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HDL5622114.1"
                     /translation="MPKIKTVRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRQL
                     RHKSMVAKADQVLVVACLPYA"
     gene            complement(15889..16431)
                     /gene="infC"
                     /locus_tag="PXE50_001191"
     CDS             complement(15889..16431)
                     /gene="infC"
                     /locus_tag="PXE50_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015871208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HDL5622115.1"
                     /translation="MKPVKRVQSNRAHRLNDEIRGVKEVRLTDENGEQVGIVSLQDAL
                     NRAEEAELDLVEISPNAEPPVCRIMNYGKFIYEKEKAAKEQKKKQKVVQVKEIKFRPG
                     TDDGDYQVKLRSIIRFLEDGDKVKITVRFRGREMAHQEIGMDVLERVKADTAEIAMVE
                     SAPGKLEGRQVVMVIAPKKK"
     gene            complement(16590..18389)
                     /gene="recQ"
                     /locus_tag="PXE50_001192"
     CDS             complement(16590..18389)
                     /gene="recQ"
                     /locus_tag="PXE50_001192"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HDL5622116.1"
                     /translation="MNTTAISVLNNIFGYQKFRDGQEEVINAVLENRDCLVIMTTGGG
                     KSLCYQVPALCLDGITLVISPLISLMKDQVDQLITNGIEAAYLNSTQTLEEQQLVEQK
                     ALSGQLKLLYLSPEKVMTQGFFHFISLCKISFIAVDEAHCVSQWGHDFRPEYTLLGGL
                     RNTFPNVPLMALTATADLTTRSDILHHLRLNSPHIYLGSFDRPNIRYTVQEKFKPLEQ
                     LIKFISKQQGKSGIVYCNSRKKVEEITEKLSARKISVMGYHAGMSFEQRERVQNAFQR
                     DDIQIVVATIAFGMGINKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPSEAVLFYDP
                     SDYAWLQKILLEEPESEQRNIKQHKLQAIGDFAESQTCRRLVLLNYFGEHRQEQCKNC
                     DICLDPPQQYDGLLDAQKVMSVIYRTGQIFGQHHIIAVLRGMNNLKIREHQHDQLSVY
                     GIGKEQSQHYWQNVVRQLIHLGLIIQNIANHSALQLTESARPFLRGEKQLQLALPRLG
                     ISATAFVQKQASHRYDKDLFARLRFLRKQIADLENIPPYIVFNDATLQEMAEFLPTSK
                     VEMLEINGVGERKFERFGQAFMSLIKEYQNNRK"
     gene            complement(18498..18803)
                     /gene="cyaY"
                     /locus_tag="PXE50_001193"
     CDS             complement(18498..18803)
                     /gene="cyaY"
                     /locus_tag="PXE50_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HDL5622117.1"
                     /translation="MNTAQFHQAVEQVWQQIEEKIYDEGLSVDTEIQGAVCTLTFDDE
                     SQVIINKQEAMLELWLASKLGGFHFKNVEGEWVTDEGRSFWQHLEEAFARHGESVSF"
BASE COUNT         5474 a         3598 c         4130 g         5641 t
ORIGIN      
        1 caataacgat tctaaaagga tatttatatg tctggcttat taaattttta tcgagctttc
       61 ctaaacttac cactttcact tttagtaaaa tctcgctcta ttccgactca tccggtggct
      121 gaactggaac taaatcttga acagccgatt gtctatgttc taccttatac ctcgcaaacc
      181 gatttattaa ttttacaaaa aaactgcttg gctttgaatt tgcccgatcc gttgcaagaa
      241 aatgtgattg aagggcaaac attgcttcgt tttgtatttt tagatgaagg tcgccgtttt
      301 tttaaatcta aaggggcgaa aagtgagaca gagtcgattt tttatcgtta tttagattta
      361 catcgtgcta atgctgaatt agacgtccaa ttagtgccgg tttcggtatt atgggggcgg
      421 gctccgggca aagaagatgc ccgccattta caggtgctta cctcattcca acgtttttta
      481 tccatggttt ggtttgggcg tgataatttt gtacgtttct cccctgcagt atcgttacgc
      541 tatatggtaa ctgaatatgg tgcagatgaa aaaatcgctc aaaaaatcgc gcgtgtggcg
      601 aaaatgcact ttgcaaaatt gcgttattca gcaatggggc ctcgtttacc aaatcgtgat
      661 gcgatgttta ataaaatcct gaattcagag gtgattcaag ctgcgattgc ggaagaagcg
      721 aagaaatcat cgcctgaaaa ggctcgcaaa gaagccgaga aaatcattaa tgaaattgcc
      781 gctgatgtaa aacacgagag tttgcgtgta gcagatcgag ttctgagctg gctttggaat
      841 aagctttatc aagggatcaa cgtgcaaaat gcagaccgtg tgcgtaaatt ggcattagaa
      901 ggtcacgaga tcgtttatgt gccttgccac cgtagccata tggactattt gctcctatct
      961 tatctacttt accatcaagg attagtaccg ccacatattg ccgctgggat caatttaaat
     1021 ttctggccgg caggcccgat tttccgtagt tggggagcat ttttcattcg ccgtaccttt
     1081 aaaggaaatc gcctctattc caccattttc cgtgaatatt tagcggaatt attctatcgt
     1141 ggttattcgg tcgaatattt tattgaaggc gggcgttcac gcacaggtcg tttattagag
     1201 cctaaaaccg gtatgatgtc gatgagccta caagccttac agcgagggct gaatagatct
     1261 ttaagtattg tgcctgttta tatcggttat gaacacgtct tagaagtcga tacttacgct
     1321 aaagagttga gaggtgcggc aaaagagaaa gaaaatgcgg gcttggtgct acgagtgctg
     1381 aaaaaactga aaaatttagg tcaaggatat gtgaatttcg gtgagccaat tttggtgaat
     1441 aattacttaa atcaatattt ccctgagtgg aaagagcctt ccgaagatgg acgacctaag
     1501 tggttaaatg aagccgtgga taatatttca catcaagtaa tggtgaatat caataaagcg
     1561 gcagcagtta atgcgaaaaa cttagtgggg tcagcattat tggcatctcg ccagcgtgca
     1621 ttaacccgtg aacaactcat tgaacaactt ggaagttata ttcagttatt tcgtaatgta
     1681 ccttattcta aagatatgac attaccaact gaaagtgcag aagtgatgtt gaatcatgtt
     1741 attcatttac ctcgttcggg cgttttaatt gaaaaagata attttggtga actggttcgt
     1801 ttagaacgag aatctgctgt gttaatgaca tattacagaa ataatgtgca gcatttattt
     1861 gtgttgcctt cacttgttgc aagtatggta cttcatcatg aggctgtttc gaaagatgtt
     1921 gtgattaagt cggttaatcg tatttatcca ttcttgcaag cagagttatt cttacacttt
     1981 aagcaagaag aattaaaagc acatattgaa gcaattattg cggaactaag tcggcagggg
     2041 gtgattaaaa acgaaagtga tatgttaatg atcaatcgct cacatattcg taccttgcaa
     2101 ttacattcag ctggtgtgcg tgaaatcctt caacgttatt atattagcct aagtgtcttg
     2161 ttggagcagc caaatattag tcgtggctat ttagaaaaag agagtagttc aattgctcag
     2221 cgtttatcag tcttgcatgg tattaatgcg ccggagtttt ttgataaggc gattttctct
     2281 acctttacat caagtctaaa agcacaaggg tattttgatg gtgatgataa tttagcgatt
     2341 gcaaaagtta aagaaacgga atcgttgtta cgtagtttga tttcgattga agttcaacag
     2401 accattcaag gtgcgatggc taaagtcgca gaatctgtag agaatcctaa tatcgcagga
     2461 taataaatca aagaagggcg ctaacaagcg ctcgtttctt gcaattttgt tgccaaaaat
     2521 aaaagctgaa tgcgcgacca cattcagctt ttttacttcc tatataatta ttttggttca
     2581 ccgattggta aaacagtctt accaaaactt tcattaataa tatccgcagc ggctaagtag
     2641 aacgctaaga atgcggttaa taaaccgaag ttaccaccaa tgttagttag ggtggtgtta
     2701 tgggtaaaat cacctgcggc taaaaggtag aaagtaatgg ttaaacttaa gaaaatagct
     2761 tgtaatgcac gggcttttgc tagtgtgccg atgaacatca taagtgtgaa tgttccccaa
     2821 gctactaagt accaaccaac gaattctgcc gatacattcg cagcaaagaa cactttaaat
     2881 aatgcaaaag accaccagaa tgcaccatag ctggtaaacg cagtaaagcc gaacgtgtta
     2941 cctttagcaa attcaaacat acctgcaatc atttgtgatg tgccaccgaa agcaaatccc
     3001 attgctaaaa ctaaacctac gttttcaccg ctgaatgtac cgttattgat taggcttagt
     3061 aaaaatgtag taagtgcaaa accgcataaa ccgagcggag ccgggttagt tcctgaattt
     3121 ggagctgaca ttgaaaacct ctgttatatt gttacaccat aagtgtggta attgtttatt
     3181 tacgccgata aatcagacgt tatgtgccta aaatttaggg cgataaagta tagcgatttt
     3241 gcagtaaatt gactagaaat ttccgagaca agcggtgaga tttttgcaaa attttgccaa
     3301 aaaatgaccg cttgttgttg tcatttagct atggatttaa ctgccgatat tggctgggtg
     3361 ttacgcaata ttgcttttta aaggcggtaa taaaatgcga ctcggattgg aagccgcaag
     3421 ataaggcgat acttaatacc gacccagctt ggcttttgag cagcattgct gctttttgta
     3481 gcctaatttt gtgtacaaaa gcatgtgggc taatacataa atgtttgtta aataagcgga
     3541 ctaactgggc acgagaaagg tggataaatg ccgccatatc atcgacttgc cattcgtgtt
     3601 cgggattaag caaaatagct ttgatcaaag gtcttaagtg taagtcttgc caacctttta
     3661 aaataccgaa taactgattg ttatggttaa ctagatgttc tcgtaagatc atagttaaaa
     3721 taacaacagc aagcgagtta accacagatt ttacggctaa attaggtgtt tctgcttctt
     3781 gttttagaat atctaacatt gcttttaatg gtgtctcggc aacttgaaat acgatcattt
     3841 caggtaagct ttccattaat tcggcttgat ggtcataata aaaatggagg cagaacatat
     3901 cgcattctga ttgagaaagt cctgcttggg tgagtgtaaa tgcacccaat tgttcagggt
     3961 ttaccgcatt tttgctggtc aaaggctgta tttgactacg taatgtatga tcggcaaatc
     4021 tggggaaaaa tacaatatct ccctgtttaa ggtgatgggt tttcccatta tgttgtagat
     4081 aagcttgccc atagctgatg atatgagcga ttgcttgtcc ggtttgatgc ggattctcaa
     4141 gttgccaatc tccctgtaac tgacatttca cactgattcc ggctgagatt tgagcgaaag
     4201 ctagaagcct atctaatata tccattgttc attccttata tttccacctt aaattgcgat
     4261 tatttcatta taatatgagc tgatttgata ataaagttta tcagataaac gcaataataa
     4321 atgcgttttt tcatattatt cactttagga ggaaatcaat atgtcttcat tccaaaattg
     4381 gacagaacac acagctcacg ttaagcaatc ttttggtaaa ttagggcaaa aacaccctaa
     4441 aatgcttgaa gcttataaag cattaggtac agcggccgca gcggaagcat tagatcacaa
     4501 aactcgtgaa ttaattgcat tagcagtagc gattacaaca cgttgtgaaa gttgcatcag
     4561 tgtacacgca gaagaagcgg caaaagcagg tgcaaccgaa agcgaaattg ccggtgcatt
     4621 agcgactgcg attgcattaa atgccggtgc ggcatatacc tatgctttac gtgcattaga
     4681 agcggtggaa gagcaaaaat aaggagcaat aaatgaagaa attggcttgg attttaggct
     4741 ttgcagctat gatgccaatg atgtctagtg ctaaacaagc atcagttcag caagtgcagg
     4801 ctgaaaaagc agcgggcatt tggattgatg tacgttctgc tgaagaattt cagcaagggc
     4861 atttaaatgg tgcaattaat gtaacgcata ctgaaattgc acaacgtatc gcagaagttg
     4921 ctccagataa aaatcagccg attcatcttt attgccgctc gggtcatcga gctgaagcgg
     4981 cgcttaatga gctaaaaaaa ttaggttaca gcaatgtaac taatcatggt ggttatgacg
     5041 atctgattaa agccgggttg aaataactgt tttgagtgcc aagcatttgc ttggcacttt
     5101 tcgtttatat ctgaggttaa aaattatgag tgcttttaac aattttgtta attttgttgc
     5161 aaatattgtt gctccaatgc aacgccaatt cattaacttt gtacgtattg ccatttgtat
     5221 cgtgatggtt tggattggtg gtttaaaagt ctgccaatat gaagcagacg gtattgccca
     5281 ttttgtgtct aatagcccgt tctttagtta tatgtacaaa aaaggcccga atttagttga
     5341 tgacggcaca ggtaaaatgg tgatggaata tacccttcac aaaaaccctg aaggtaaaat
     5401 ggtggcaaaa aacatcgaat ggcataaaga aaacggcact tatactgcat cttatatcat
     5461 cggtgcaacc attgtgacgg ttggtttatt gacgttatcc ggtatttggt tcccggtttc
     5521 cggtatggcg gggggcttac tcacctttgg tatgtcgatt gttacactct cttttatgat
     5581 caccacccct gaaatttggg tgccgaattt aggtggggat atgccaaccc cagcgcatgg
     5641 tttcccatat ctgtcagcag tcggtcgttt aattgtgaaa gatgtgatta tgatggcagg
     5701 cggcttggtt gccgcagcgg aatgtgcaaa tcgcatttta gccagacgta aagcgattgc
     5761 ttaattgata gtggtaatgc aagcggtcat tttcttgtaa aattttgcaa taaaatgacc
     5821 gcttgttttt tgtcaatttg ccataatttc aagtataatt caattacgta atcgtttgct
     5881 tttatggaga ggaataaaat gacaacaatc ggtacaccgt taagaacgaa cgctacaaaa
     5941 gtgatgatgt taggttcggg cgagttgggg aaagaagtgg taatagagct gcaacgctta
     6001 ggcgtagaag tgattgcggt ggatcgttat gacaatgcac ctgcacagca agtggctcac
     6061 cgtgcttata cgatttcgat gttagacggg aatgcattgc gagatttggt ggagaaagaa
     6121 aaaccggatt ttattgtgcc cgaagtagaa gccatcgcaa ctgcaacctt ggttgagtta
     6181 gagcaagagg gatataacgt aatcccaacg gcaaaagcaa cgcaattaac aatgaatcga
     6241 gaaggcattc gccgattggc ggcagaagag ttgggcttaa aaacgtcgcc ttatcgtttt
     6301 gtggataatt ttgaacagtt ccagcaagcg attcaagaaa tcggcattcc gtgtgtggtc
     6361 aaaccgatta tgtcttcttc cggacacggg caatcagtaa ttaaatctga agcggatatt
     6421 caacaggctt gggattattc gcaacagggc ggacgtgccg gcggtgggcg tgtgattgta
     6481 gagggtttta tcaaattcga ttatgaaatt acccagctta ccgttcgcca tattcacggc
     6541 acgtcgtttt tagctcccat cgggcatatt caggttgatg gcgattatcg tgaatcttgg
     6601 caaccgcagc aaatgtcgga cattgcattg aaaaaagctc aagaaaccgc agaaaaaatt
     6661 acctctgcac tgggcggaag agggattttc ggcgtggaac tttttgtctg tggcgatgag
     6721 attattttta acgaagtctc cccacgtcca cacgataccg gaatagtaac aatggcatca
     6781 caagagcttt ctcaatttgc tctgcacgcc cgtgcgattt tgggcttacc gattccggaa
     6841 atttaccgca tcagcccggc agcttctaaa gcgattgtgg ttgaagggaa atcggataat
     6901 gtgcgttttg gcggtgtaga taaggtatta gccgaaatcg ggacgaatat ccgcttattc
     6961 ggtaaaggcg aagtaaacgg acaccgccga ttaggggtaa ttcttgctcg tgatgaaaat
     7021 acagtgagag cattagaaaa agctcggcga gcttatgata agttagatat tcaattataa
     7081 agtcaggatt ttgatattcg ttgatagtag gcattttatg cctactatcc tataggcctc
     7141 taatcaaatt ggatgaaaaa gttgaagatt gttaatcctc tttgccgaga atttggttca
     7201 cttcgctctt atacaatact gcttttgctc caaatacggc ttgtacaccg ccaccgactt
     7261 ccagcacgtc aatcgcaccg agttttttca gtgttgcttt atccacggct ttcacctctt
     7321 tcactgccac acgcagacgg gtaatacaag catccacatt ttcgatatta tttgcagagc
     7381 caagagcggc gataatttta tgggcatttt cagtcagtga gctggtttgt tgttcgacta
     7441 cctcttcact ctcttccgca cgtcccggtg tcattacgtt gaattttttg atcaggaata
     7501 ggaacgagaa gtagtaaagt gccgcccacg gcaagccgac tatgatcact cgaagccagt
     7561 tagtgttctc gttgccttgc aaaatgccaa acagggtgaa gtcgatcacg ccaccggaga
     7621 aggtgttacc aatcgagatg ttgagtaagt ctgcaatgta gaacgacacg ccgtctaaaa
     7681 aagcgtggaa cacatagagc cacggggcaa caaacaggaa cataaattca atcggctcgg
     7741 taatgccggt gataaaagag gtgagcgctg cacctaagaa cagaccgcta atcgcaccac
     7801 ggcgggcttt cggcacagcg tgatacatcg ctaaacaggc ggcaggtaag ccaaacatca
     7861 tcgtatcgaa acgtccagcg aagaaacgtg taccttcggt aaataagcct tgatgggttg
     7921 gatcggcgag ttgggcgaag aagatttttt gcgccccgat aatggtttca ccatttacca
     7981 cttctgttcc gcccaattcg gtgtaccaaa acagcgggta gatcatatgg tgtaagccga
     8041 ccgcaccgct taaccgcatt aagaaaccgt agaaaaaggt gccgatttcg cccatttccg
     8101 caatcccttg ccctgctgaa accaaccact gttggaaagc cggccagatc aaaaagaaca
     8161 ctgccccgac aaaaatcgca gcaaaggcgg tcacaatcgg cacaaaccga gagccgccaa
     8221 agaagccgag aatttgcggc agctgaatgt tgtggtattt gttatgcagt ttcaccgtaa
     8281 tcaagcccat taccagcgag ccgatcacac cggtatcaat ccctttggtt tcaggaggaa
     8341 acagcggaat gagggcagaa atcgtgcctg tcataatcaa ataaccgacc actgctgcca
     8401 gtgccgctac gcctttatct cgttttgcta atccaatgcc taaaccgata cacagtaata
     8461 atgcaaggtt gccaaacacc acactgcctg ccgatgccat aatctggaaa atgccctgta
     8521 aagtcgggtt atccagtatc gggtaggctt gcaccgttgc cttattcgac aaagctccgc
     8581 caatccctaa cagcaaaccg gctgccggta aaatcgcaat cggcagcata aaagcttttc
     8641 cgacttgttg cagttgtttg aacataaaat ttctcctttt ttatggttgt atttgatggt
     8701 ttatagcata ctgaaattta gccgtatgag gtgtgatata actcacagat ttgcaaaatt
     8761 tttagcaaat tcgaccgctt gtaaaaaaat taccgcttgc ggaaaaattg aagtagaatt
     8821 aagcattttt ttagcaaaca caacataaaa aatttggaga agattatgcc tattttacgt
     8881 tcagcaactt ccactcaggg tcgtaatatg gcgggggctc gtgcattatg gcgtgcaacc
     8941 ggtatgaaag aaaatgattt tggtaagccg attattgcag tggtgaactc attcacccaa
     9001 tttgtgccgg ggcacgtcca cttaaaagat atggggcagt tggttgcggc agaaattgaa
     9061 aaagccggtg gggtggcaaa agaattcaac accattgcgg ttgatgacgg cattgcaatg
     9121 ggacacggcg gaatgcttta ttctttacca agccgtgatt taattgcaga cagtgtggaa
     9181 tatatggtga atgctcactg tgctgatgcg atggtgtgta tctctaactg cgataaaatc
     9241 accccgggaa tgttaatggc agcaatgcgg ttaaatattc cgactatttt tgtctctggt
     9301 ggcccgatgg aagccggaaa aactaaactt tccgatcaat taattcgctt ggatttagtc
     9361 gatgcaatga tcgaaagtgc cgacccgaat gtgtctgatg aacgtattga tgcgattgaa
     9421 cgtagtgctt gcccgacttg tggttcttgt tcaggtatgt tcaccgcaaa ctcaatgaac
     9481 tgtttaactg aagctttagg cttaagttta ccgggcaatg gttcaatgtt ggcaactcat
     9541 gctgaccgta aagagctttt cctaagagca ggtcgtgaaa ttgtggaact ttgccgtaaa
     9601 tattaccaac aagacgatga gagcgtgtta cctcgctcaa tcgctacctt cgatgcattt
     9661 gaaaatgcaa tgagccttga tattgcaatg ggtggttcaa gtaataccgt gcttcattta
     9721 ctagcgactg ctcaagaagc cggcgttgat tttaaaatgg aagatattga ccgcctctct
     9781 cgtgtcgtgc cgtgcttaag taaaattgcc ccgaatacca ataaatacca tatggaagac
     9841 gtacaccgtg ccggtgggat tatgggcttg ctgggcgaat tagatcgtgc aggtttaatc
     9901 catcgccacg ttaaaacagt gctaggttta acgatagaag agcaactgaa tcaatacgat
     9961 attattcgta ataaagatga agatttacac aaattcttcc gtgcaggtcc ggcaggaatt
    10021 cgtactacta aggctttctc gcaagattgc cgttgggaca ctgttgatga tgaccgtgta
    10081 aacggctgta ttcgcaatgt ggaaaatgct gtgaccaaag agggcgggtt agcggtatta
    10141 tttgggaata ttgcagaaga tggatgtatt gttaaaaccg caggggtaga tgagtctatt
    10201 tggaaattca ctggcaccgc aatcgtgttt gaaagccaag aagatgcggt agcaggtatt
    10261 ttaggcggaa aagtgaaaga agggcatatt gtgattatcc gctatgaagg tccgaaaggc
    10321 ggcccgggta tgcaagaaat gctttatcca actagttatt tgaaatcaat gggcttaggc
    10381 aaaaaatgtg ctttattaac tgacggtcgt ttctctggcg gtacctcagg gttatctatc
    10441 ggacacgctt caccggaagc cgcttcagga ggagcgattg ccttaattaa tgatggcgat
    10501 acggtggcga ttgatattcc gaatcgttcg attaacttaa tggtttcaga tgaagaactt
    10561 gctgctcgcc gtgcagaaat ggaagcccgt ggcgataaag cgtggcagcc gctaaaacgt
    10621 gagcgagaag tgtcgtttgc actaaaagtg tttggacatt ttgccacctc tgctgataaa
    10681 ggtgcggtga gggataaatc gctgttaaag taaataaatt agaaaaaaga agcatttcaa
    10741 taatatattg atctgctctt tattcagctg aatatttaat ctagctgaat ggagagcaga
    10801 tcgatagcct aatttacatc tttttgtttt gatacaggga aatgtattac aagcattttg
    10861 ccggttttgg cagacctgca attttagtgg cttgttttgc aggaccatca ggaaacaagc
    10921 gttgtaaata acggctgttg cctttttctt caccgaattt ttgtgccatt gtctttacca
    10981 gcattcgaat tgctggtgaa gttttgtatt cttggtagaa atcccgcacc agataaataa
    11041 tttcccaatg ttctgcggtt aagctaattt gctctttttc ggcgattttt tctgctaatt
    11101 ctacagacca atcatttaaa ttagttaaat agcctgaagc atcggttggg tattggatat
    11161 tatttaattc aatcgtcatc aaataaaaat gccacataat gtggcattcc tcttaaacta
    11221 aaacgctagt cgtcactacc tagcacaccg aagatttgta agaagcttac aaataggttg
    11281 tagatagaca catataaatc aacggttgca cgaatgtagt tggtttcgcc accgtgaata
    11341 atgttgctgg ttgccagtaa aatcgcaccg cttgagaaaa tgacaaacaa gctgcttagg
    11401 gctaaactta atgccggaat tgctaagaag atattggcaa taataccgac taataatacc
    11461 acaaacaggg caaccatcat tccgctgata aagctcatat cttttttggt ggttaataca
    11521 taagctgaac aagcgaagaa aaccaatgcg gttgcaccga atgcaagggc gacaatatcc
    11581 cctaaacccg caccgatgta acggtttaaa ataggaccta aggtatagcc taagaagccg
    11641 gttaaagcaa atacgcttaa gatacccgca ctgctgtttg aggtggcatt cgtcaagaaa
    11701 agtaagccgt aaaagccgac caataatccc caccacggca tagccggtgc gttcatttga
    11761 attgcaacaa aagcaacaac tgcggagaaa gtcagggtca ttgccaataa catataggta
    11821 ttgcgaagca ctttgtgggt gctaattaga gattcaccag ttgaatagct gtgagctaaa
    11881 cgattttcca taaaaattcc ttctgttttt gtgtttaaat cggaacatcc gatggattaa
    11941 tatctatgga taaatttcca taaatcaaga agtaaggtag ccgtaattta ttgtaaagtc
    12001 aatgcgattt tgtaacagaa gagtaaaaaa aaacatttag ttgtgttaca cttaatacca
    12061 ctctacttta tattcctttt catcgatgaa ttcgctatga agctcaattt cccaacttat
    12121 ttaaccttat ttcgggtagg attaacccca ctttttattg tggcttttta tctgccgaca
    12181 aaatatgcgc ctgaaatttc aacacttatt ttttttattg catcgattac cgatgccttt
    12241 gacggctatt tagcacgcaa atggaatcaa accacccgac ttggtgcatt tttagatcct
    12301 gttgcggata aagtcttggt agctgttgcg tttgtctgcg tggcggagta ttaccatact
    12361 tggtggatta ctattccaat ctgcattatg attgcccgtg aaattattat ttcggctttg
    12421 cgtgaatgga tggcggagct tggggaaagg gccagtgttg ccgtttcgat ttgggggaaa
    12481 gtaaaaacga ctgctcaaat gctcgcatta ggtggaatgt tatggagaca gaaccaacta
    12541 atggagattt tagcctttat tctgctttat attgcagtgg gtttaacgat ctggtctatg
    12601 atgcagtatt taaatgcttc aaagaatagt ctattgaagt cataagcggt catattttta
    12661 ttcttttttg caatttgtag agtggaaata tcgctctaca attttcaatt ttatcaactc
    12721 taatgtctga atttaacgct aaatccttcc tgttaaatgt gcctcaccaa ccgggtgttt
    12781 atcgtatgta tgatagtaaa ggcacgataa tctatgtggg taaagccaaa gatttaaaaa
    12841 agcgtttagc cagctatttt cgtagccaac tttccagtaa aaaaacggaa gccttggtgg
    12901 caaatcttgc taatattgaa acgacgatca ctcattctga aacagaggcg ttactccttg
    12961 aacataatta tattaaggaa aatcagccga aatataatgt gttgctcaga gatgacaaat
    13021 cttatcctta tattctgtta actaaacata agcatcctcg tttaacagca tttcgtggta
    13081 gtaaaaagat cgccggtgaa tattttgggc cttatccgaa tgttacggca gttcgggaaa
    13141 cactgaattt attgcaaaaa atttttccta ttcgtcagtg tgaagatact tattataaaa
    13201 accgttcacg accttgctta cagtatcaga tcggacgctg tttagcccct tgtgtagagg
    13261 gctgttattc acccgttgaa tacgatcagc aggttaattt ggttcgtttg tttttacagg
    13321 gaaaagatca ccaagtagtc gagcatctgg tacagaaaat ggaagatgcg gcggaggctt
    13381 tggattttga aggtgcggca cgttttcggg atcaaattca atcagtaaga gcggtgcaag
    13441 aaaaacaatt cgtctctaat gataggctag atgatcttga tattatctcg atcgtttatc
    13501 aaaatgggat tgcctgtgtg catatcttat ttgttaggca aggtaaggta ctaggcaatc
    13561 gttcttactt tccaaaagtg ccaagtaata cagatttaac cgagctcgca gatacctttg
    13621 tcggtcagtt ttatttacaa atgaaccagc accgcaccat acctaaccaa attgtaattg
    13681 atcatcaatt aagtgaatct aaggcactca gtgaaatttt aagtgagcaa gcagggcata
    13741 aagtcagcat tttagataat gccatcagag gtgataaaca gcgttattta gctttagcga
    13801 gaactaatgc aatggcagca ttagttttac aacttaagca agaatcccat attcaaagcc
    13861 gttatcaggc attgaaagaa atgttgaaaa tgtcagagat taaaagaatg gagtgctttg
    13921 acatcagtca tacaatgggc aaccaaacag tggcttcttg cgtggtgttt gatgaaaatg
    13981 ggccgctaaa atcggattac cgccgtttta acattgaggg gattaccgga ggtgatgatt
    14041 atgcagcaat ggagcaggct ctcttgaaac gctataatcg agaattaccg ccagaaaaga
    14101 tccctgatat tatttttatt gatggtggca aagggcagtt gaaccgagcg ttagatgtct
    14161 tcgctaaact tgatgtggaa tgggataaat cgaaaccgct tttaattggt gtggcaaaag
    14221 gcgtagaacg taaagctggg ctggaaactt taattatcag caaatgggat aaagaaattc
    14281 acttaccgcc agatagtctt gccttgcatt taattcagca tattcgagat gaatcccacc
    14341 agcatgccat tagtgggcat cgtaaaaaac gccaaaaggc ctttaccgaa agtggattag
    14401 aatctattgc cggtgtcggt gcaaaacgcc gacaagcgtt gctaaaatat ttaggcggaa
    14461 tgcagggggt gaagtctgca accttggaag agattcaatc agttccggga atttctaaag
    14521 cgttggcaga ggttattttt gatacattaa aaaatagtta aattatcaat agcgatatcg
    14581 cttccagccg taatggtagc ccactcctat gcttgggtaa attatagggt gaattggcag
    14641 atttatgctt tctgagcgtt tatcgctttg gtttaatggc tcatcatgtt gctttgtatt
    14701 tttatcaaca gtttgcttat tgattactcg ttgatggtaa tcctgaactg cttgcatatc
    14761 cattggtact gtgctttgtt gttggggtgt cgaacaggcg gttagtgcaa cgctcaatcc
    14821 gagtaaaatt aattttttca tatcatttcc ttatattgca aaatattttg cttttttgac
    14881 cgcttatttt gctattaatt cttaaaaaga ttattttatc cataaaaaag gacgcactag
    14941 gcgtcctcat ttctattctt taaaattaaa gagcagattt tgctttttca actaaagctg
    15001 cgaaagcaac tttgtcaaat actgcgatgt cagctaagat cttacggtcg atttcaacag
    15061 atgctttttt caagccgttg atgaatttgc tgtaagataa accgttttga cgagctgctg
    15121 cgttaatacg agcaatccat aattgacgga attgacgttt acgttgacgg cggtcacggt
    15181 aagcatattg agcagcttta actactgctt ggaaagcaac gcgatacacg cgtgaacgtg
    15241 caccataata acctttagca gccttaagaa ctttcttatg gcgtgctctt gcaataacac
    15301 cacgttttac acgagccatt atttaatctc ctaattgtct attttgattg gtggtcgtca
    15361 tcacgacctt tactaagaat tctatccgta cgtccgtact ttactacact acgctaacct
    15421 aaaaggctta tgcgtatggt aagcacgcta ctactaaaac ttggtcagct ttcgctacca
    15481 ttgatttgtg acgtaattga cgtttacgtt tagtggtttt cttagtcaaa atgtgacgta
    15541 agtgagattg tttacgttta aaaccgccgg aagctgtttt tttgaaacgc ttagcagcac
    15601 cacgtactgt tttaatttta ggcattgtta aaaaactccg cattgtttgt tagatattat
    15661 gaaaataagg cgaattttgt gaacaaaatt acttggaagc acttattctc cgctatacga
    15721 ttttcatcgt taaaaagtca agcaggctgc tgagtttgcc tgttgagcat tttctctttc
    15781 ttggctaggc aaaaaagctt gcgaatttta gcgaaaatat aaccgctatg caagccaatt
    15841 taagctttat caagaaaaaa gcacattaaa acaatgtgct tatcgaaatt atttcttctt
    15901 aggtgcgatc accatcacaa cttggcgacc ttccaatttg cctggggctg actctaccat
    15961 tgcaatttct gcagtatctg ctttgacacg ttctaaaacg tccataccga tttcttggtg
    16021 agccatttca cgaccacgga aacgcactgt gatttttact ttatccccat cttctaagaa
    16081 acggataatg ctacgaagtt taacttgata atcgccatca tcagttcccg gacggaattt
    16141 gatctcttta acttgaacaa ctttttgttt tttcttttgt tcttttgctg ctttctcttt
    16201 ttcgtagatg aacttaccat agttcataat acgacaaact ggtggttcag catttgggct
    16261 gatttccact aaatccaatt cagcttcttc tgctctattt agagcatctt gaagtgatac
    16321 aataccaact tgttcgccgt tttcatcggt taagcgaact tcttttacgc cacgaatttc
    16381 gtcattaaga cgatgtgcac gatttgattg aacacgtttt acaggtttaa tagccttatt
    16441 ccttctagta aatttttgct taaattttac cgcttgagag cgtataaata ttttagattg
    16501 cttgttttaa gtgattaaaa aacagctaaa cgtgcggatt ctataagatt ttcagtgctt
    16561 atgcaataat aaagccctta tttaactgcc tattttcggt tattttgata ttctttgatt
    16621 aaactcataa atgcttgccc aaatcgttca aattttcgtt caccaacacc attaatttct
    16681 aacatttcca cttttgaagt cgggagaaat tctgccattt cttgcaaggt ggcatcgtta
    16741 aagacgatat aaggtggaat attttcgagg tcagctatct gcttgcgtaa aaaacgtaag
    16801 cgtgcgaata ggtctttgtc atagcgatga cttgcttgtt tttgcacaaa tgcagtcgca
    16861 gatataccta aacgtggcaa tgcaagctga agttgctttt ctccacgcaa aaatggtctg
    16921 gcactttcgg ttaattgcag agcggaatgg ttagcaatat tttgaataat caaccctaaa
    16981 tgaatcagtt gccgcaccac attttgccaa taatgttggc tttgttcttt tccgatacca
    17041 taaacggaaa gttgatcgtg ttgatgttca cgaattttga gattgttcat tcctcgcaat
    17101 accgcaataa tatggtgctg accgaaaatt tgaccggtgc ggtaaatcac cgacatcact
    17161 ttttgggcat caagtaagcc atcgtattgt tgcggtggat ctaaacaaat atcgcagttt
    17221 ttgcattgct cttggcgatg ttccccaaag tagttgagta agactaaacg gcggcaagtc
    17281 tgtgattcgg cgaaatcgcc aattgcctgt aatttatgct gtttaatatt tctctgttcg
    17341 ctttccggct cttccaataa tattttttgt aaccaagcat aatcgctagg atcataaaaa
    17401 agcacggctt cagaagggag atcatctcgc ccggctcgtc cggtttcttg atagtaagat
    17461 tcgatagagc gaggtaaatc gaaatgtacc acaaaacgta cgttggattt gttgatcccc
    17521 ataccaaacg caatagtggc aaccacaatt tgaatatcat cacgctgaaa ggcattctgc
    17581 actcgttctc tctgttcaaa actcataccg gcgtgatagc ccatcacgct gattttacgg
    17641 gctgagagtt tctcggtgat ttcttccact tttttgcgac tgttgcagta aacaataccg
    17701 cttttgcctt gctgtttgct gatgaattta atgagctgtt caagcggttt aaatttttcc
    17761 tgcacggtgt agcgaatatt ggggcgatca aagctgccta aatagatatg tgggctattt
    17821 aagcgtaaat gatgcagaat atcggagcgg gttgttagat ctgccgtggc ggtgagtgcc
    17881 atcaacggca cattcgggaa agtgtttcgt aagccaccta gcagggtata ttcagggcgg
    17941 aaatcgtgcc cccattggga aacacaatgg gcttcatcaa ccgcaataaa gctgatttta
    18001 catagcgaaa taaagtggaa aaagccttga gtcattacct tttcagggga aagatagagt
    18061 aattttaatt gaccggataa ggctttttgt tccacaagtt gctgctcttc gagcgtttga
    18121 gtggagttaa gataagctgc ttcaatgccg ttggtgataa gttgatccac ctggtctttc
    18181 atcaacgaaa taagcggcga aatcaccaaa gtgatgccgt ctaggcacaa agccggcact
    18241 tggtagcaaa gggatttgcc accgcctgtt gtcataatca cgaggcaatc acgattttcc
    18301 aacacggcat tgataacttc ttcttgcccg tctcggaatt tttgatagcc aaaaatatta
    18361 tttaaaacag aaattgcggt ggtgttcatt ggtagttggt tgctacttat gatagtactc
    18421 gtcttctgag agtatctttt aaaatgaaaa taaagcactc atcaaagacg agtgctgtct
    18481 tagttaacaa ttaggcatta gaaagaaacg ctttctccgt gtcgagcaaa agcttcttct
    18541 aaatgttgcc agaacgagcg accttcatct gttacccatt cgccttctac atttttaaag
    18601 tggaaaccac ccaatttgct ggcaagccat aattccagca ttgcctcttg tttattaatg
    18661 ataacttgcg attcatcatc aaaggttaag gtgcagaccg ctccttggat ttcagtatcg
    18721 actgataatc cttcgtcata aattttttct tcaatttgtt gccatacttg ctctacggct
    18781 tggtggaatt gtgctgtgtt cattggtgta tccttatttg aatgttatat aagtagtaaa
    18841 tac
//
LOCUS       DANLZQ010000037        18768 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.037, whole genome shotgun sequence.
ACCESSION   DANLZQ010000037 DANLZQ010000000
VERSION     DANLZQ010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 18768)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18768)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18768
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.037"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(65..901)
                     /locus_tag="PXE50_001194"
     CDS             complement(65..901)
                     /locus_tag="PXE50_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HDL5622118.1"
                     /translation="MLPHIYIGTGGYADTDLIGTLYPFGTAKEDFLFVYSQHYDTLEI
                     NSTFHAPIGQKAFEGMVQKAEGRLNFSVKLHQDFSHQRTATLDQAQLFLNALAPFTAE
                     GLLANLFVQFPTQFERMPLNRRYLAELCQWFADYPLAIEFRHPSWHIPAVFDTFAKSS
                     NLIWCNVDYPQNIGLPAFHFFANQRTAYLRLHGRNPNWWKGQSAAERHDYRYSDEELK
                     GLAELLFSRRTEFDRLYLYFENTTKSHAFYNIQTLKGFLAEKGFQIKPVPENLLGQQS
                     LF"
     gene            1009..1884
                     /locus_tag="PXE50_001195"
     CDS             1009..1884
                     /locus_tag="PXE50_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL5622119.1"
                     /translation="MWIWFTLLAAVAQAGRNAFQKQLSVNVPVLGVTLARFFYAVPLA
                     SGYLYFLYQYDDNLNIPHFPPLFFVYAIGAGLAQILATSLMVQLFHLKNYAIGVGLAK
                     SEAVWAALLGVLFFGVTISGIGWLGVVLGGVAIFLMTGSGNLRQLSWKTLFLGIASGL
                     CFALTSLWVREASLQLNSHYLLSAAWVLFSVISFEAVILVIYLALLQKETLIKFFRFP
                     KLGMLTSLFSFLGSFGWFNAMSLNHVAFVKTLGQVEIFFILGISYFVFKERLKIQDFI
                     GLILVVIAAILVVLG"
     gene            2020..2460
                     /gene="nudB"
                     /locus_tag="PXE50_001196"
     CDS             2020..2460
                     /gene="nudB"
                     /locus_tag="PXE50_001196"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HDL5622120.1"
                     /translation="MNYKNPHSILVVIYAKNTQRVLMLQRKDDPDFWQSVTGSINIGE
                     TPLEAAEREVSEETGLQTFEQKQPLVDCQKQIEFEIFPHFRYKYAPNITHCVEHWFLL
                     PLDSEQEPILTEHLAYRWVSVEDAVRLTKSPNNAQAIQEYLTSK"
     gene            2473..3213
                     /locus_tag="PXE50_001197"
     CDS             2473..3213
                     /locus_tag="PXE50_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000907250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDL5622121.1"
                     /translation="MAGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGGDTS
                     SNPRLRAAVDKALSSNMTRDTINRAIERGVGGGDDTNMETKIYEGYGPGGTAVMVECL
                     SDNANRTISQVRPSFTKCGGNLGTEGSVGYLFSKKGLILVANADEDALTEAAIEAGAD
                     DIQPQEDGSFEIYTAWEDLGSVKDGIEAAGFKIENAEVTMIPSTTVELDAETAPKLLD
                     LINRLEDCDDVQNVYHNGEISDEVAALL"
     gene            3343..3870
                     /locus_tag="PXE50_001198"
     CDS             3343..3870
                     /locus_tag="PXE50_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622122.1"
                     /translation="MKLVKFVPALAATLVLAACSNANTQSAPQQAQDAVTKVAEQATQ
                     QVNEIAGNAPRASGAVKVEKATDGAKSIVYRCQSGKRVTANYVFQGEEAKAVNLLVQS
                     GGKTQKIPTLTRDASNQDSTSFKTDKYSWDLDTGFTLSSNGQSGMLTKYGAKTDTIVA
                     KLCDVDKALTSKLNK"
     gene            3937..4515
                     /gene="ruvC"
                     /locus_tag="PXE50_001199"
     CDS             3937..4515
                     /gene="ruvC"
                     /locus_tag="PXE50_001199"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HDL5622123.1"
                     /translation="MAIILGIDPGSRVTGYGVIRQNGRQLEYLGSGAIRTTAEDLPTR
                     LKRIYAGVSEIITQFQPNMFAIEQVFMAKNPDSALKLGQARGTAIVAAVNHDLPVFEY
                     AARLVKQTVTGIGSADKVQVQDMVTRMLKLSAKPQADAADALAIAITHAHSIQHSLIV
                     AKQSQQNVSSEKEQILALMKTRYSRGRFRLKG"
     gene            complement(4581..5861)
                     /gene="murA"
                     /locus_tag="PXE50_001200"
     CDS             complement(4581..5861)
                     /gene="murA"
                     /locus_tag="PXE50_001200"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HDL5622124.1"
                     /translation="MEKFRVYGPFSLNGTVDISGAKNAALPILFAAILAEKTVTLKNV
                     PDLKDVDTTFKILRQLGVTVEKGSDKGVVHIDASKINNYVAPYELVKTMRASIWALAP
                     LVARFQLGQVSLPGGCTIGARPVDMHISGLEKMGAKIELDEGYVKATSNGRLNGARIY
                     MDKVSVGATLSVMMAGTLAKGTTVIENAAREPEIVDTADFLNAMGAKISGAGTDMITI
                     EGVEHLGGCEHSVVPDRIETGTFLVAAAISGGRITCRNTKADTLDAVIEKLREAGMQV
                     DVTENTITLDSLGRRPKAVNIRTMPHPGFPTDMQAQFTLLNTVAEGTSRITETIFENR
                     FMHIPELIRMGAKAEIEGNIAICYGVEQLKSAEVMATDLRASISLVLAGCIATGETIV
                     DRIYHIDRGYEHIEEKLRQIGARIERFSAPFEGE"
     gene            complement(5971..6231)
                     /locus_tag="PXE50_001201"
     CDS             complement(5971..6231)
                     /locus_tag="PXE50_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA/IbaG family iron-sulfur metabolism protein"
                     /protein_id="HDL5622125.1"
                     /translation="MNPSQIEEILKQALSDATEVHAQGENAHFGVIVVSDSIASLSKV
                     KQQQAVYAPLAEYFTTNAIHALTIKVFSVEKWKTERLLNMVG"
     gene            complement(6264..6587)
                     /locus_tag="PXE50_001202"
     CDS             complement(6264..6587)
                     /locus_tag="PXE50_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HDL5622126.1"
                     /translation="MPQKTLQWDIQQNNESLFVKLSGELTRNTLLPLWKQRASFLSPT
                     GKQSLYWDLKEITRIDSAGFTLLAELLNHYHKIIPNSLINTPDSVRTLAALYDLDGWF
                     EQFII"
     gene            complement(6599..7234)
                     /gene="mlaC"
                     /locus_tag="PXE50_001203"
     CDS             complement(6599..7234)
                     /gene="mlaC"
                     /locus_tag="PXE50_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HDL5622127.1"
                     /translation="MLKNIKKIIVTGLVAVSALFSTTAFAETSPYVLMQQTADKLFGD
                     IKANQAKIKSNPEYLRTIVRNDLMPHVHVKYAGQLVLGKNLSAATDAQKEAFFNAFGQ
                     FVEQSYAQVLTQYQDQSVQIESPKSVDGKSIVSIRVNVSGKGAAQPIKLDFKWRKNSK
                     TGEWQAYDMAAEGVSMVATKQNEWAGVIRQKGIDALIAQVAQSAKQPITLK"
     gene            complement(7280..7804)
                     /gene="mlaD"
                     /locus_tag="PXE50_001204"
     CDS             complement(7280..7804)
                     /gene="mlaD"
                     /locus_tag="PXE50_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HDL5622128.1"
                     /translation="MRQSIKYEFWVGLFVLLGLAALVFLGLRVANVQGFSNEKTYTLY
                     ATFDNIGGLKVRAPIKVGGVVVGRVADISLDNKTYTPKVALAVNESFNQIPDTSSLSI
                     KTSGLLGEQYVALNVGFVIEGETAMMKEGDTFVDTNSAMVLEDLIGQFLYGDKKSDKT
                     EDEKASDSAEPKAE"
     gene            complement(7825..8601)
                     /gene="mlaE"
                     /locus_tag="PXE50_001205"
     CDS             complement(7825..8601)
                     /gene="mlaE"
                     /locus_tag="PXE50_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HDL5622129.1"
                     /translation="MVNFISSIGAVVINFIRTLGRSAFMLWGALIGKPEFRKHTPLLI
                     KQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFAAESSLGTLVSLSLLRELGPVV
                     TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPVLAAI
                     FTAIGIWGGSLVGVDWKGVDGGSFWSVMQNSVNTSDLINGFIKSVIFAFAVVWIALFN
                     GYDCVPTSEGISQATTRTVVNASLVILGLDFILTAIMFGG"
     gene            complement(8594..9397)
                     /gene="mlaF"
                     /locus_tag="PXE50_001206"
     CDS             complement(8594..9397)
                     /gene="mlaF"
                     /locus_tag="PXE50_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid ABC transporter ATP-binding protein
                     MlaF"
                     /protein_id="HDL5622130.1"
                     /translation="MTKTENLVEVKNLTFKRGERVIYDNLNLQVQKGKVTAIMGPSGI
                     GKTTLLRLIGGQILPESGEILFDGRDICKANNKELYEIRQRMGMLFQSGALFTDISTF
                     DNVAFPIREHTRLPEELIRKLVLLKLEAVGLRGAANLMPSELSGGMARRAALARAIAL
                     DPDLIMYDEPFTGQDPISMGVIVELIKELNQALNLTSIVVSHDVKEVLSIADYAYIVA
                     DKRVIAEGTPEILQASEDPQVVQFLAGKADGPVRFHYPAKDYTEELFNG"
     gene            9622..11016
                     /locus_tag="PXE50_001207"
     CDS             9622..11016
                     /locus_tag="PXE50_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Do family serine endopeptidase"
                     /protein_id="HDL5622131.1"
                     /translation="MNKTMKKSFLTAFILGSTIAAMPAYAEATLPTAVNGQAVPSLAP
                     MLEKVRPAVVSIAVEGKTKGDSRRSREIPEEFEFFFGPHADLFGNRSSAPRNFRGVGS
                     GAVINAEKGYVITNNHVIDNADKITVKLEDGREFKAKLVGADPLSDVALIQVEDPKNL
                     TEIKFADSDKLQVGDFTVAIGNPFGLGQTVTSGIISALGRSTGQSDEGYENYIQTDAA
                     VNQGNSGGPLINLNGELIGINTAIISPSGGNAGIAFAIPSNMANSLVTQIIEFGEVKR
                     GMLGIKGGELNADLAKEFNISTQQGAFVSEVLPDSAAAKAGFKAGDVITEINGQKIRS
                     FSELRAKVATSGVGKEIELTYLRDGKEAKAKVTLQSDSEAKVTASNLIPALKGADFNN
                     YNAKGIKGVEISNVEKGSIAEMRSLKKGDIIIGVNRHSVENIADLRKILETKPSVVAL
                     NIVRDGANFYVILQ"
     gene            complement(11068..11829)
                     /locus_tag="PXE50_001208"
     CDS             complement(11068..11829)
                     /locus_tag="PXE50_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C biogenesis protein"
                     /protein_id="HDL5622132.1"
                     /translation="MKTREQLSQENYQQAVKFAQHFADDVRQEFEREAEQRYQFERTQ
                     FEQSVLQNNAQNRPLAKIASLSCVAILLLAMTYYGLSGRYQVVQSGLQQHQDFQQQMS
                     DAHGTSKNERYILSLQNQLRENPNNGDLWYELGQAYALSNDFDSALVCYDNAEKLLGK
                     RAAILGAIATARYYDNGQKMTVEIQAIIEQALQLDKNENASLLLLASDSFLNNNFQQA
                     LDNWRKVLDSNNDSINRRAIIQSMEMARQMLNSQQ"
     gene            complement(11816..12268)
                     /gene="nrfF"
                     /locus_tag="PXE50_001209"
     CDS             complement(11816..12268)
                     /gene="nrfF"
                     /locus_tag="PXE50_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfF"
                     /protein_id="HDL5622133.1"
                     /translation="MRNSIISIGFLQKIRKILPLVFGLLLFVGTVQAEMVDTFQFQNE
                     ADRVRAISLARSLRCLQCQNQNLVESNATAAYNMRIEVYEMVNQGKSNEEIIRIMTER
                     FGSFVNYDPPFTPQTWVLWGLPVGLFSLLFLAILWRTRKNKGNKNENA"
     gene            complement(12258..12791)
                     /locus_tag="PXE50_001210"
     CDS             complement(12258..12791)
                     /locus_tag="PXE50_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin family protein"
                     /protein_id="HDL5622134.1"
                     /translation="MKKILLLIPLLLLVVIVGFLTVPLMNKDALAPTEDWQGKPFPEF
                     VGKNLLDSNAHLNNNSLPKEPYILNVWVSWCTWCIKEFPILLELKQKGVPIVGLTYSD
                     RPNDALNALKNWGNPFSLIIDDYEKGFLIQTLKVSSAPSSYLIDKHGVVRYQQKGYNP
                     DFAQDFLPKLEALRNEK"
     gene            complement(12788..14692)
                     /gene="nrfE"
                     /locus_tag="PXE50_001211"
     CDS             complement(12788..14692)
                     /gene="nrfE"
                     /locus_tag="PXE50_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfE"
                     /protein_id="HDL5622135.1"
                     /translation="MLPELGYFSLLLAAISAIFQVGFALLGEVRKQYHWLALAPLFTY
                     LQAAFTTFSFSTLAYAFLTDDFSVIYVAAHSNSQLPDFFKFAATWGGHEGSMLFWLTA
                     LVIWSAVFCKFSQKIDRLFANRTLAMLGLIALGFLLFILLVSSPFERGFPPPPEGRDL
                     NPMLQDIGLIFHPPLLYLGYVGFAVSFAMIVAALVSGGMDAAIMRWLRPWTMISWGFL
                     TAGIILGAWWAYYELGWGGWWFWDPVENASLMPWLLGTALVHSLIVSQQRGIFYYWTI
                     LLAIFAFALSLLGTFIVRSGVLTSVHAFAVDPDRGMALLILFFGLSFIALALFAFRAN
                     LWQGKVRFNLLSKETAFLLINGLFSVAASVVLLGTFYPMIFTVMNWGSISVGAPYFNS
                     VFTPLALLLMIVMGFAVVLGWKQISNKQILVKLWLLPIAVGLALGLIYASISQREHFA
                     LQPLPTIFISLAIWIILTHLPYSQKMWQIRPLAMRLAHIGFAVCVIGAMMNSYYGDEI
                     GVRLKPNQAAELAGYTFKYEDYHDLIGPNYTAEQAVFSISRDEQLLATVTPERRYYDV
                     RTMTMAEVGLFHHNLDDIYIVMGDKFGNLEYAFRLHYKPYVQALWLGGMMMVMAALLA
                     LFGYRRENKK"
     gene            complement(14962..15909)
                     /gene="nrfD"
                     /locus_tag="PXE50_001212"
     CDS             complement(14962..15909)
                     /gene="nrfD"
                     /locus_tag="PXE50_001212"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase subunit NrfD"
                     /protein_id="HDL5622136.1"
                     /translation="MNEYVPFQTPNLVWDGTIAIYLFLLGISSGAVQLAIAYRNSGVK
                     MEKPSQNWIIRSAAILGTLPTIIGLLLLIFHLTKPWTFWKLMFNYNFTSVMSMGVMLF
                     QLYMAVLVVWIAIMFKDWIVRYLPVVSGLIDFAEAKLLKPIEFILFVLAAVLGAYTGF
                     LLSALVSYPMLNNPVLPALFLASGASSGIAATFLVILLAGKLSGESHEVHFMHKFEVP
                     IMVTELGLIVAFFVGLHFGGADKSLALTHALNGFWGNVFWIGVMLIGIAIPLVANIFG
                     SHRLKHNVKFIILISVFDLIGVLCLRYFILYAGQLTVAS"
     gene            complement(15909..16586)
                     /gene="nrfC"
                     /locus_tag="PXE50_001213"
     CDS             complement(15909..16586)
                     /gene="nrfC"
                     /locus_tag="PXE50_001213"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007524349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase Fe-S protein"
                     /protein_id="HDL5622137.1"
                     /translation="MTCTRRDFVSGAGAIAVVASTGLATSITLATEKEQKKIRYAMVH
                     DETACIGCTACMDACRTTNKVPEGVSRLEIIRSEPFGEFPNVQYEFFRQSCQHCTNAP
                     CVSVCPTGASFIDPETGIIDVHSDLCVGCQYCIAVCPYRVRFIHPEKKSADKCNFCRD
                     TNLAEGKQPACVEACPTKALTFGDMNDPSSDIFHKVKNNPVYRTKTALGTEPNLYHIP
                     FGKGEHR"
     gene            complement(16586..17242)
                     /gene="nrfB"
                     /locus_tag="PXE50_001214"
     CDS             complement(16586..17242)
                     /gene="nrfB"
                     /locus_tag="PXE50_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase pentaheme
                     subunit"
                     /protein_id="HDL5622138.1"
                     /translation="MKKLISKAGRAVALIQAVVFAGFFAISSANALMPEQPKPLWQSE
                     TADDAKVAQDARRDPNKYCTQCHESANATGKPFHHAGKHFQKDVKSPNNGEPLTCISC
                     HGNISESHRKGAKDVMRFNPHGKASNPSLERSVNEQNQVCFACHTAEKLREKFWAHDT
                     HATKIACTNCHEIHPEKDPMKDIPEKDRIKLCTDCHTKIHSGEFKNPEMKATEAKGTK
                     "
     gene            complement(17261..18763)
                     /gene="nrfA"
                     /locus_tag="PXE50_001215"
     CDS             complement(17261..18763)
                     /gene="nrfA"
                     /locus_tag="PXE50_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming nitrite reductase cytochrome
                     c552 subunit"
                     /protein_id="HDL5622139.1"
                     /translation="MKFLIKSLAVATISILGCLQTALAEEAKTESLTDKAVKHEKLGV
                     KIESANHLFAEKYPLQYDSWKSTAKSTDRGSALEADPRYVILWAGYAFAKDYNKPRGH
                     FYAVTDVRDILRTGAPKDENDGPQPMACWTCKGPDVPRLIEEKGERGYFDPKWAKYGA
                     EIVNSIGCADCHDTTSEEFKQGKPALRVARPHVLRALNTVGWKFEDLDKHGKRPAVCA
                     NCHVEYYFKNKTDVTFPWDKGVDVDSIEKYYDEINFTDWTHALSKAPMLKTQHPDFEV
                     WSQGTHGKNGVTCIDCHMPKVKDKDGKVYTDHKIGNPFDQFEATCKTCHEQSKETLEK
                     RVKEYKHEVKEAMIRLEDQLVKAHFEAKAAWEAGATQEEMKEILMAIRHAQWRWDYSA
                     AGHGNHFHAPDVMLRTIATGIDRAADARAKLGVVLAKHGVTTPVAIPDISTKEKAQLA
                     IGLDIPKEQAAKDEFLKTVVPQWEKEARAKGLLPAEEADKPVAAPKAEAK"
BASE COUNT         5518 a         4141 c         3779 g         5330 t
ORIGIN      
        1 taagggctat ccattactaa atggcatggc cctttattta ctcctcaaca atgtaaatta
       61 cccatcaaaa caaactctgc tgcccaagca aattctccgg cacaggtttg atttgaaatc
      121 ctttttccgc caaaaagcct tttagggttt gaatattata aaaggcgtgg cttttagtgg
      181 tgttttcaaa gtagagatag agcctgtcaa attccgttct gcggctaaaa agcaattctg
      241 ccaagccttt taattcctcg tctgaatagc ggtaatcgtg gcgttctgcc gcactctgcc
      301 ctttccacca attcgggtta cgaccatgta agcgtaaata agcagtacgt tggttggcaa
      361 aaaagtgaaa tgccggtaag ccgatatttt gtgggtaatc cacattacac caaatcagat
      421 tagagctttt cgcaaaggta tcaaacaccg ccggaatatg ccagcttggg tggcgaaatt
      481 caatcgctaa cggataatcc gcaaaccatt ggcacaactc ggcaaggtaa cggcggttaa
      541 gtggcatacg ttcaaattga gttgggaact gaacaaataa atttgccaat aacccttcag
      601 cggtgaacgg agctaacgca ttaagaaata attgtgcttg atctaaagtc gccgtgcgtt
      661 gatggctgaa atcttgatgc agtttcaccg aaaaattcag ccgaccttcc gctttctgca
      721 ccattccttc aaaggctttc tgcccgatgg gggcgtggaa tgtgctgtta atttccagcg
      781 tgtcgtaatg ttggctatag acaaagagaa aatcctcttt tgcagtgccg aatgggtaaa
      841 gcgtgccgat taaatctgtg tcggcatagc cgccggtgcc aatataaata tgagggagca
      901 ttgtgtttat tctttcaatt ttttgcaaat tttaatggtt ttttaaccgc ttgcaaactg
      961 agaataaaag agtaagattt ggctatcttt tcttatttca tcatcattat gtggatttgg
     1021 tttactctgc tggcagccgt ggctcaagcc ggtcgcaatg cctttcaaaa gcaattaagc
     1081 gtcaatgtgc ctgtattggg ggtaacgctc gcccgctttt tctatgctgt gccgttggca
     1141 agcggttatc tctatttttt ataccaatat gacgataacc tcaacattcc ccattttcca
     1201 ccgctgtttt ttgtatatgc tatcggggct gggttggctc aaattctggc aacttcgcta
     1261 atggtgcaac tttttcactt aaaaaattat gcaataggtg tcgggctggc gaaaagcgag
     1321 gcagtatggg cggctttact gggcgtgtta ttttttggtg taaccatcag tggcattggc
     1381 tggcttggcg tggtactagg tggagtggcg attttcttaa tgaccggcag cggtaatcta
     1441 cgccaacttt cgtggaaaac actctttctc ggcatagcca gcggtttatg tttcgccctc
     1501 acatcacttt gggtgcgaga ggcaagcctg caactcaaca gccactattt gctttcagcg
     1561 gcgtgggtac tttttagcgt gattagcttt gaggcagtga tattggttat atacctagct
     1621 cttctccaaa aagagacact gattaaattc tttcgttttc caaaattagg tatgttgacc
     1681 agcctgtttt catttctcgg ctcattcggt tggttcaatg caatgagcct gaaccacgtt
     1741 gcctttgtaa aaacgcttgg acaagtggaa attttcttta ttctcggtat ttcctatttt
     1801 gtgtttaaag aacggcttaa aattcaagat tttatagggc tgattttagt agtgattgcc
     1861 gcaatcttgg tggtgctggg ctagatcgga tttttacgtt ttttatctag ctttgtaggg
     1921 tgggcgtaag cccacgcaaa accaataaat catttatccg tgggcttacg cccaccctac
     1981 gatacctaaa aaaattaaat ttcacatctt agtaataaaa tgaactataa aaatcctcat
     2041 agtatccttg tggtgattta tgctaaaaat acccaacgag tattgatgct acaacgcaag
     2101 gacgatcctg atttttggca atcggtgacc ggttcgatca atattggaga aacaccgctg
     2161 gaagcagcag aacgggaagt gagcgaagaa accggtttgc aaacttttga gcaaaaacaa
     2221 ccgcttgttg attgccaaaa gcagatagaa tttgaaattt tcccgcattt tcggtataaa
     2281 tacgcaccta atatcacaca ttgtgtcgaa cattggtttt tgctgccact tgatagtgag
     2341 caagagccta ttttaaccga acatttggca tatcgttggg tttcagtgga agatgcggtt
     2401 cgactgacta aatctcccaa caatgcccaa gcaatacaag aatatttaac atcaaaataa
     2461 ggaaacaaca gaatggcagg ccatagtaag tgggcaaata ttaaacaccg taaagcggca
     2521 caagatgcac aacgcggtaa aatttttact aaattaattc gtgaattggt gactgccgcc
     2581 aaactcggcg gtggtgatac ctcttccaac cctcgtttgc gtgcggcggt ggataaagcg
     2641 ttatccagca atatgacccg tgataccatc aaccgtgcaa tcgagcgtgg tgtaggcggt
     2701 ggcgatgata ccaatatgga aaccaaaatc tacgaaggtt acggcccggg tggtacagca
     2761 gtgatggtgg aatgtttaag tgataacgct aaccgtacga tttcccaagt tcgtccaagt
     2821 ttcacaaaat gtggcggtaa cctaggtact gagggttcgg taggttattt atttagcaaa
     2881 aaaggcttaa ttttagtggc aaatgccgat gaagatgcct taactgaagc tgctattgag
     2941 gccggtgcgg acgatattca accacaagaa gatggtagct ttgaaattta taccgcttgg
     3001 gaagatttag gctcagtgaa agacggcatt gaggctgcag gctttaaaat tgagaatgca
     3061 gaagtaacaa tgattccatc aactaccgtt gaacttgacg cagaaactgc accaaaactt
     3121 cttgatttaa tcaaccgcct tgaagattgt gatgatgtac aaaacgttta tcacaatggt
     3181 gaaatcagtg acgaagtcgc tgcattactg taataaaaaa atcacgcaaa ataagcataa
     3241 tttaggttat gcttattttt tatgaacttt tttcctatat tactgactaa cctaatgtag
     3301 tttatatgct actactttac tataacattt taaggagagt ctatgaaatt agtgaaattt
     3361 gtccctgccc tagcagcaac tttagtatta gccgcttgct ctaatgcaaa cacacaatct
     3421 gctcctcagc aagctcagga cgctgtgact aaagtggctg aacaagcaac acagcaagtg
     3481 aatgaaattg caggtaatgc acctcgtgca agtggtgcag taaaagtaga aaaagcaact
     3541 gatggtgcaa aatcaattgt atatcgttgc caaagtggta aacgtgtaac tgcgaattat
     3601 gtcttccaag gagaagaggc aaaagcagta aatctattag tccaaagcgg cggtaaaaca
     3661 caaaagatcc caacattaac tcgtgatgcc tcaaaccaag attctacttc attcaaaacg
     3721 gataaatatt cttgggattt agacacaggc tttaccttat catctaatgg ccagtcaggt
     3781 atgctaacca agtatggtgc taaaacagat accatcgttg ctaaattatg tgatgtagat
     3841 aaagcattaa cctcaaaatt aaataaataa tctttcttga ttttactact cataagcgag
     3901 aagataatat cttctcgctt attttattgc acaaagatgg ctattatttt aggaattgac
     3961 cccggctcaa gggtaacagg ttacggtgtg attcgccaaa acgggcgaca gctggaatat
     4021 ttaggaagtg gggctattcg aaccacggct gaagatctgc ctacccgctt aaaacggatt
     4081 tatgcaggcg tgagtgaaat catcactcaa tttcaaccaa atatgttcgc catagagcag
     4141 gtatttatgg caaaaaaccc tgattctgcc ttaaagctcg ggcaggctcg aggaacagcg
     4201 attgtagcag cggttaatca cgatttacct gtgtttgaat atgccgcccg attagtcaaa
     4261 caaaccgtta cgggaattgg ttctgctgat aaagtacaag tgcaagatat ggtaacccgt
     4321 atgcttaaac tctccgccaa accacaagcc gatgcggctg atgcattagc cattgcgatt
     4381 acccacgctc attcaatcca acattcactg attgttgcta agcaaagcca gcagaatgtg
     4441 agtagtgaga aagagcaaat tttagcacta atgaaaaccc gttatagccg gggaaggttt
     4501 aggttaaaag gctaactcaa tataaaatga ccgcttggaa ctaatgtttc aagcggtcat
     4561 tttttgagaa aattttacaa ttactcgcct tcaaaaggag ctgagaaacg ttcaattctc
     4621 gccccaatct gacgtaattt ttcttcgatg tgttcatagc cacggtctat gtggtaaatt
     4681 ctatccacaa tcgtttcacc cgttgcaata cagcctgcca acactaagct gatggaagca
     4741 cgcaagtcag ttgccattac ttctgctgat tttaactgct ctacaccata gcaaattgca
     4801 atattacctt caatttccgc tttggcaccc atacgaatca gctcaggaat atgcataaaa
     4861 cggttttcaa aaatcgtttc tgtaatacgg cttgtgcctt ctgcaactgt atttaataag
     4921 gtaaattgag cttgcatatc agttgggaaa cctgggtgtg gcatagtgcg aatgttcact
     4981 gctttcgggc gacgacctag agaatcaagc gtgatagtat tttccgtcac atcaacctgc
     5041 attccagctt cacgtaattt ttcgatcact gcatcaagag tgtctgcttt ggtgttacgg
     5101 caagtaattc gaccaccgga aatagccgct gccactaaaa atgtaccggt ttcaatacga
     5161 tccggcacta cgctgtgttc gcaaccgcct aaatgctcaa ccccttcaat ggtaatcata
     5221 tcggtacctg caccagaaat tttagctccc atcgcattta agaaatcggc agtatctaca
     5281 atttcaggct cacgagcagc attttcaata acagtagtac cttttgctag agtacctgcc
     5341 atcatcaccg ataaagttgc tcctacgctc actttatcca tatagattct tgcaccgttt
     5401 aaacgaccgt ttgaagttgc tttgacatag ccttcatcaa gctcgatttt cgcccccatt
     5461 ttttcaagac cggaaatgtg catatctacc ggtcttgccc cgatagtaca accgcccggt
     5521 aaagaaactt gcccaagttg gaaccgggca actaatggag ctaacgccca aattgaagca
     5581 cgcattgttt tcactaattc gtaaggtgca acgtaattat tgatcttact cgcatcaata
     5641 tgtaccacgc ctttatcgct acctttttca accgttaccc ctaattggcg taagatttta
     5701 aaagtggtgt ccacatcttt taaatcaggc acatttttta acgtaactgt tttttcagcc
     5761 aaaatagcgg caaataaaat agggagtgcg gcatttttcg cacctgaaat atcgacagta
     5821 ccatttaaag aaaatggacc atacacacga aatttttcca tttgggagat cctaaaaaat
     5881 aataatttgt aggggcgaaa aatttttcgc ccaattttcc aacgtttaca aaagagtttg
     5941 ggcgaatagt gattcgcccc tacatttcat ctatccaacc atatttagca aacgctcagt
     6001 tttccatttt tccacgctga atactttaat ggttaaagcg tgaatcgcat tagtagtgaa
     6061 atactcagct aaaggggcat aaacagcttg ctgttgtttt acttttgaaa gagaagcaat
     6121 gctgtcactt actacaataa cgccaaagtg ggcattctcg ccttgagcgt ggacttctgt
     6181 tgcatcagat aatgcttgtt ttaaaatttc ttcaatttgt gatggattca ttctgacttc
     6241 ctaaaatatg attggtaact cactcaaata ataaattgct caaaccaacc gtctaaatcg
     6301 tataatgcag ccaaagttct gacagaatct ggcgtattaa tcaaactgtt tggtatgatt
     6361 ttatggtaat gattcagtaa ttcagcaagt aaggtaaaac cggcagaatc aatccgagtg
     6421 atttctttta aatcccaata taggctttgt ttccctgttg gagataaaaa agaagcacgt
     6481 tgcttccata aagggagcaa cgtgttacga gttaattcgc ctgatagttt cacaaaaaga
     6541 ctttcgttat tttgctgaat gtcccattgt aatgtttttt gaggcataac taaactactt
     6601 attttaaagt gataggctgt tttgcagatt gtgccacttg tgcaattaag gcatcaatcc
     6661 ctttttgacg aatcacaccc gcccattcgt tttgcttggt tgcaaccata cttactcctt
     6721 cagcggccat atcgtatgct tgccattcac ctgttttgct gtttttacgc catttaaaat
     6781 ctaatttgat cggctgtgca gcacctttac ctgacacgtt tacacgaatg cttacgatag
     6841 atttaccatc caccgatttc gggctttcaa tttgcacact ttgatcttga tactgggtta
     6901 acacctgagc ataagactgc tcaacaaatt gaccaaaagc attaaagaat gcctcttttt
     6961 gtgcatcagt cgcagccgat aagtttttcc ctaacactaa ttggcctgca tatttcacgt
     7021 gaacgtgtgg cattaaatcg ttacgcacaa tggtacgcaa atattcaggg tttgatttaa
     7081 ttttcgcttg atttgcttta atatcgccaa ataatttatc tgcggtttgt tgcattaata
     7141 cataagggct agtttcagca aatgcggtgg ttgaaaataa tgcagaaact gccactaagc
     7201 ctgttacgat aattttttta atgtttttta acattattga tgctctccaa aactctaaat
     7261 tagaggttgt tgtacttaat tactctgctt ttggttcagc agaatcactt gctttttcat
     7321 cttcagtttt atctgacttt ttatcaccat ataagaactg accgattaaa tcttctaaca
     7381 ccattgcaga attggtatct acaaaagtat caccttcttt catcattgca gtttcacctt
     7441 cgattacgaa gccaacattt aacgcaacgt attgctcgcc taataagcct gaggttttaa
     7501 ttgagagcga gctggtatcg ggaatttgat taaaactttc atttaccgct aatgccactt
     7561 tcggggtgta ggttttgtta tcaagtgaaa tatcagccac tcggccaact accacaccgc
     7621 caactttaat aggcgcacga acctttagtc caccaatatt atcaaaagtt gcatacaggg
     7681 tgtaagtttt ctcatttgag aagccctgca catttgctac tcttaagcct aaaaagacaa
     7741 gagctgcaag cccaagtagt acaaataagc ctacccaaaa ttcatattta attgattgac
     7801 gcattgtctg ttcctttcaa aaaatcaacc gccgaacatt atcgcagtta aaataaaatc
     7861 caatcctaaa atcaccagtg aagcatttac caccgttctt gtggtcgctt ggctgattcc
     7921 ttctgaagtc ggtacgcaat cgtagccgtt aaataaggca atccagacca ccgcaaaggc
     7981 aaaaatcaca cttttaataa agccgttaat taaatcgctg gtatttaccg agttttgcat
     8041 taccgaccaa aaactgccac catcaacgcc tttccaatct accccgacta atgagccgcc
     8101 ccaaattccg atagcggtaa aaatagcagc taacaccggc attgaaatca cgcctgccca
     8161 aaagcgagga gcgatgatac gtctaagcgg atcaaccgcc atcatttcaa gactggaaag
     8221 ttgctctgtg gctttcatca gcccgatttc tgcggtcaat gccgaaccgg ctcgccctgc
     8281 aaataataat gcagtaacta caggaccaag ttctcgtaaa agcgagagtg aaaccaaagt
     8341 tcccaagcta ctttcggcgg caaaatcgac caataccaca tagccttgta agcctaacac
     8401 cattccgata aataagcccg acagcataat aattaagagc gattgcactc ctaacacata
     8461 aagctgttta atcagtaacg gggtatgttt tctaaattca ggtttaccga ttaatgctcc
     8521 ccataacata aaagcggaac gccctaatgt acggataaaa ttaatcacca ccgccccgat
     8581 agagctaata aaattaacca ttaaatagct cctccgtata atcttttgct ggataatgga
     8641 accgcaccgg accatcagct ttaccggcta agaattgtac cacttgcgga tcttcgcttg
     8701 cctgtaaaat ttccggtgta ccttcagcaa tcactcgttt atctgccaca atataagcat
     8761 aatcggcaat acttaatact tctttcacat cgtgagacac cacaatggag gtcaaattca
     8821 atgcctgatt taactcttta atcagctcga caatcacacc catactaatc ggatcttgcc
     8881 cggtaaacgg ctcatcatac ataatcagat ccggatctaa cgcaatcgct cgagcaaggg
     8941 cggcacgtct tgccataccg ccggaaagtt cggacggcat taaatttgcc gcacctcgca
     9001 acccaaccgc ctcgagcttc aataacacca atttgcgaat tagctcttcg ggtaaacggg
     9061 tatgctcccg aatcgggaaa gccacattat cgaaggtaga aatatcggta aataacgccc
     9121 ccgattgaaa caacatcccc attcgttggc gaatttcata caactctttg ttattggctt
     9181 tgcaaatatc tctgccatca aataaaattt cgcccgattc aggtaaaatc tgcccaccga
     9241 ttagcctcaa cagggtggtt ttaccaatcc cagaaggccc cataatggca gtcactttac
     9301 ctttctgcac ttgcagattc aggttatcgt aaatcactcg ctcccctcgc ttgaaggtca
     9361 agttttttac ttcaaccaaa ttttccgttt ttgtcatcaa ataggactca aattaataaa
     9421 agtgatattt atggtctatc aaatttgcca gaatgtcaaa aaacttttaa taatctgaca
     9481 aaaatctgcc tttacaagcg gtcagatttg ctaaattttt tgcaaaccgg ctgaactgaa
     9541 aaagaaaggt cttgtcttag ccaatacgag cgttttcact cgtagattat aaaaacatag
     9601 gatatgagga acattcacaa tatgaacaaa acaatgaaaa aatcattttt aactgcattc
     9661 attttaggct caaccattgc cgcaatgccg gcgtatgcag aagcaacatt acccacagcc
     9721 gtaaatgggc aagctgtgcc aagccttgca ccaatgctgg aaaaagttcg cccggcggtg
     9781 gtgagtattg cagtagaagg taaaaccaaa ggcgatagcc gccgcagtcg tgaaattccg
     9841 gaagaatttg aatttttctt cggtcctcac gccgatttat tcggcaaccg ctcatcagct
     9901 ccacgcaatt tccgtggcgt tggatcaggt gcagtcatca atgccgaaaa aggttatgtg
     9961 attaccaata accacgtgat cgacaatgcc gataaaatta ccgtaaaact tgaagacgga
    10021 cgtgaattta aagctaaatt agttggtgct gatccccttt cagatgtggc gttaattcaa
    10081 gttgaagatc caaaaaactt aactgaaatt aaattcgccg attccgataa attacaagtg
    10141 ggcgatttta cagttgcaat cggtaacccg tttggcttag gacaaactgt tacttcaggc
    10201 atcatctcgg cacttggtcg ttcaaccggt caatccgatg aaggctatga aaactatatt
    10261 caaaccgatg cggcagttaa ccaaggtaac tctggcggcc cgttaattaa cttaaacggc
    10321 gaattaatcg gaattaacac cgctattatt tctccaagtg gtggcaatgc cggtatcgcc
    10381 tttgcgattc caagtaatat ggcaaacagc ttggtgactc aaattattga gtttggtgaa
    10441 gtaaaacgtg gaatgttagg cattaaaggc ggtgaattga atgctgacct tgctaaagag
    10501 ttcaatattt ccacccaaca aggggcattt gtaagcgaag tcttaccgga ttctgctgct
    10561 gctaaagccg gctttaaagc aggtgatgtg attactgaaa tcaacggtca aaaaatccgt
    10621 agtttcagcg aattacgagc aaaagtagct acttcaggtg taggtaaaga gattgaactt
    10681 acttacctgc gtgacggcaa agaagccaaa gcaaaagtga ccttacaatc ggattctgaa
    10741 gccaaagtta ctgcttcaaa cctcattccg gcattaaaag gggcagattt taacaactac
    10801 aatgccaaag gcattaaagg ggttgaaatt tctaacgtag aaaaaggctc gattgctgaa
    10861 atgcgaagcc tcaaaaaagg cgatattatc atcggcgtga accgccactc ggtagaaaac
    10921 attgccgatt tacgcaaaat attagaaacc aagccatctg tggttgcact caatattgtg
    10981 cgtgacggtg caaatttcta tgtgattttg caataaacct tttgatccac tcaaacaaaa
    11041 gccgatgaca aaaatcatcg gcttttgtta ttgctgggaa tttaacatct gtcgtgccat
    11101 ttccatactt tggataatcg ctctgcggtt gatagaatca ttattgctat ctaacacttt
    11161 acgccaatta tcgagagctt gttgaaaatt gttatttaaa aagctgtcgg aggctagcag
    11221 gagtaaactg gcattttcat ttttatccaa ctgtagggct tgctcgataa tggcttgaat
    11281 ttcaacggtc attttctgcc cgttatcgta ataacgagcg gtggcaatcg cccccaaaat
    11341 agccgctcgt tttccgagta gcttctcggc attatcgtag caaaccagtg ccgaatcaaa
    11401 atcattgctt aacgcataag cctgccctag ttcgtaccat aaatcaccgt tattcgggtt
    11461 ttctcgaagc tggttttgca gactcaaaat atagcgttca tttttcgatg tgccgtgtgc
    11521 atcgctcatc tgttgttgaa aatcttgatg ttgttgcaaa cctgattgca ccacttgata
    11581 acgtccggaa agcccatagt aagtcattgc taacaacaaa atcgccacgc aactcaggct
    11641 tgcgatttta gcaagcggtc gattttgagc attattttgc aaaacgctct gttcaaattg
    11701 cgttcgttca aattggtaac gttgctctgc ctcacgctca aactcttgtc tgacgtcatc
    11761 tgcaaaatgt tgggcaaatt taaccgcttg ttggtagttt tcttggctta attgctcacg
    11821 cgttttcatt tttgttgcct ttatttttgc gagttcgcca caaaatagct agaaataaca
    11881 ggctaaacaa gccaaccggc aagccccata atacccatgt ctgtggcgtg aatggtggat
    11941 cgtaattcac aaaactgccg aaacgctcgg tcataatgcg gataatttcc tcattacttt
    12001 tcccttgatt caccatttca tacacttcaa ttcgcatatt gtaagccgcc gtcgcattgg
    12061 attcgaccaa attttggttc tgacattgca aacatcgcaa cgaacgagcc agtgaaatcg
    12121 cccgtacccg atccgcctca ttttgaaatt gaaaggtgtc caccatttca gcttgaaccg
    12181 tgccgacaaa tagcaacaag ccaaatacaa gcggtaatat tttgcggatt ttttgcaaaa
    12241 agccgatgga aattatgcta tttctcattt ctgagagcct ctaatttggg taggaaatcc
    12301 tgtgcaaaat cagggttgta acccttttgt tggtaacgca ctacaccgtg tttatcaatc
    12361 aaataactgg aaggtgcaga agagactttc agggtttgga tcaaaaagcc tttttcgtaa
    12421 tcatcaataa ttaaactaaa cggatttccc cagtttttca atgcgttgag ggcatcattt
    12481 gggcggtcgc tataagttaa gccgacaatc ggcacgcctt tttgttttag ttccaacaaa
    12541 atcgggaact ctttaatgca ccaagtacac cagctcaccc acacattgag aatataaggc
    12601 tctttcggca agctgttgtt atttaaatgc gcgttactat caagtaagtt cttgcctaca
    12661 aactctggaa acggcttgcc ctgccaatct tcagtgggag caagggcatc tttattcatt
    12721 aacggcacag tcaaaaagcc aacaataact acaagtaaca ggagcggaat aagtaacagg
    12781 atttttttca ttttttgttt tctctacgat aaccgaataa tgccaacagg gcggccatta
    12841 ccatcatcat accacctaac cataaggctt gcacataagg cttatagtgc aaacggaagg
    12901 catattctaa attgccgaac ttatccccca tcacaatata aatatcgtct aaattgtggt
    12961 ggaaaagccc tacttctgcc attgtcatcg ttcttacatc ataatagcgt ctttccggtg
    13021 tgacggttgc cagcaactgt tcatctcggc tgatagaaaa aacggcttgc tcggcggtgt
    13081 agttcggacc gatgagatcg tgataatctt catatttaaa ggtataaccg gcaagttccg
    13141 ctgcttgatt cggctttaac cgcacgccga tttcatcgcc gtaataactg ttcatcattg
    13201 ccccaatcac gcaaaccgca aagccgatat gggctaaccg catcgcaagc ggtcgaattt
    13261 gccacatttt ttgcgaatag ggcaaatgag tgagaataat ccagatcgca aggctgataa
    13321 atatggtggg taacggctgc aaagcaaaat gctctctttg cgagatggag gcataaatca
    13381 accctaacgc taaaccgact gcaatcggca gcaaccaaag ttttaccaat atctgcttat
    13441 ttgaaatctg tttccagccc agcaccaccg caaagcccat tactatcatt aacagtaacg
    13501 ctagtggcgt gaatacgcta ttgaaatagg gggcccccac tgaaatcgat ccccaattca
    13561 tcactgtgaa gatcatcggg tagaaagtcc ccagcaatac cacagaagca gccacactaa
    13621 ataagccgtt aatcaataaa aatgccgttt ctttagaaag taagttgaaa cgcactttgc
    13681 cttgccagag attcgctcgg aatgcaaaca gagcaagggc aatgaaactt aagccgaaga
    13741 ataagatcag cagtgccatt cctctgtcgg gatcgaccgc aaaggcatga accgaggtca
    13801 gtacacccga acgaacaata aacgtgccta ataggcttaa agcaaaggcg aaaatggcaa
    13861 gtagaatcgt ccaataatag aaaatgccac gctgttggct cacaattaaa ctatgcacca
    13921 atgcggtgcc aagtagccaa ggcattaggg aggcattttc caccggatcc caaaaccacc
    13981 agccacccca gccgagttcg taatatgccc accacgcccc taaaataatg ccggcggtga
    14041 gaaatcccca cgaaatcatc gtccacggac gaagccaacg cataatcgca gcgtccattc
    14101 cgcctgaaac gagggcggcg acaatcattg caaagctcac cgcaaagccg acatagccca
    14161 agtagagcaa aggcgggtga aagatgagcc caatatcttg caacattggg ttgagatctc
    14221 gcccttcagg tggtggtgga aagccacgtt caaatgggct ggaaaccaat agaatgaaaa
    14281 gtagaaaacc tagtgcaatt agccctaaca tcgctaaggt tcggttggca aacaagcggt
    14341 caattttttg cgaaaatttg caaaataccg cagaccaaat cacaagagcg gtgagccaaa
    14401 acagcattga gccttcgtgt ccgccccaag tggcggcaaa tttaaaaaaa tcggggagct
    14461 ggctgttgga atgagcggca acgtagataa ccgaaaaatc atcggttaga aaagcataag
    14521 ctaaggtaga aaaggaaaat gtggtaaaag cagcttgcaa ataagtgaaa agcggagcca
    14581 atgccagcca atgatattgc ttgcgaactt cgcctagaag tgcaaaacca acttgaaaaa
    14641 tggcactaat tgcagccaat aaaagtgaaa aatagccgag ttccggtagc ataaaaaatc
    14701 caaaaaatga ccgcttgtga atgtaaaaaa agccctctcc acttgtggga gagggacaga
    14761 tttttcttcg ttcagaagaa aaatcaggga gaggggaatt aaataatttt gctaaaaata
    14821 acaatactcc ctctctctga aaaatatttc tgaacgaaat atttttcggt ctcaatactc
    14881 gctacgctcg ctccttcgga gccgttggca aagccaacgt tcaaatgtaa acatttgtcc
    14941 cacaagggga gagagtatat cctaacttgc aaccgttagt tgccctgcat aaaggataaa
    15001 gtaacgcaag cagagtacac cgattaagtc gaaaacggaa attaagataa taaatttcac
    15061 gttatgtttc aagcggtggc taccaaaaat attggcaaca agcggaatcg caataccgat
    15121 taacattacg cctatccaga acacattccc ccagaagccg ttaagtgcat gggttaaagc
    15181 gagcgattta tctgctccac cgaagtgtaa gcccacaaag aacgctacaa ttaagcctaa
    15241 ttcggttacc ataatcggca cttcaaattt gtgcataaag tggacttcgt ggctttcacc
    15301 ggataacttg cctgcgagta aaatcactag gaaagttgct gcaatacctg acgatgcccc
    15361 tgatgccaag aacaatgccg gtaacacagg gttattcagc attggataac tcactaacgc
    15421 cgagagtaag aaaccggtgt aagcaccaag tacagcagcc aatacgaata agataaattc
    15481 aattggtttt aacagcttcg cttcggcaaa atcgatcaaa ccagagacca caggtagata
    15541 ccgaacaatc caatctttaa acattatggc gatccaaacc accaatactg ccatataaag
    15601 ttggaataac attaccccca tcgacattac tgaggtaaag ttatagttga acattaattt
    15661 ccagaatgtc caaggtttgg ttaagtggaa aatcagtaac agtaagccga taatggttgg
    15721 taatgtgcca agaatagccg cactacgaat aatccagttt tggcttggtt tttccatttt
    15781 gacaccgcta ttacggtaag caatcgctaa ctgaaccgca cctgatgaaa taccaagtag
    15841 gaataagtaa atagcgatag tgccatccca aacaaggttt ggggtttgga aaggtacata
    15901 ttcattcatt atctatgttc tcctttacca aatggaatgt gatataaatt cggctccgtg
    15961 cctaatgccg ttttggtgcg ataaaccgga ttatttttca ctttatggaa aatatcgcta
    16021 cttggatcat tcatatcacc aaaggttaaa gctttagtcg gacaagcctc tacacaagca
    16081 ggctgtttgc cttctgcaag attggtatct cggcaaaagt tacatttatc cgccgatttt
    16141 ttctcagggt gaataaaacg tacacgatac gggcaaaccg caatacagta ttggcaaccg
    16201 acacacaaat ctgagtgtac atcaataatc ccggtttcag gatcgataaa tgaagcaccg
    16261 gtcgggcaaa cactcacaca aggtgcattg gtacagtgtt ggcaagattg gcggaaaaac
    16321 tcatattgta cgttcggaaa ctcaccgaaa ggctcactac ggataatttc taaacgagaa
    16381 accccttccg gcactttgtt ggtggtgcga caagcgtcca tacaagccgt acagccgata
    16441 caggcagttt catcatgaac catcgcatag cggattttct tttgttcttt ctcagtagca
    16501 agagttatgg aggtggcaag ccctgtactt gccacaactg cgatagcacc tgcccctgag
    16561 acgaaatctc tacgggtgca agtcattatt ttgttccttt tgcttctgtg gctttcattt
    16621 caggattttt aaattcgcct gaatgaattt tggtatgaca atccgtacaa agtttaatgc
    16681 gatctttttc aggaatgtct ttcatcggat ctttttccgg gtgaatttca tgacagttgg
    16741 tacaagcaat tttagttgcg tgcgtgtcgt gagcccagaa tttttcacgc aatttctctg
    16801 ccgtatggca agcaaaacag acttgatttt gctcatttac cgaacgttca agtgatgggt
    16861 tacttgcttt accgtgtggg ttaaaacgca ttacgtcttt tgcccctttg cggtggcttt
    16921 cagaaatatt accgtggcaa cttatacaag tgagtggctc tccattattc gggcttttca
    16981 catctttttg gaaatgtttg cctgcgtgat ggaaaggctt acctgttgcg tttgccgatt
    17041 cgtgacattg agtacaatat ttatttggat cacggcgtgc atcttgagct acttttgcat
    17101 catcagccgt ttctgattgc caaagaggtt ttggctgctc aggcattaac gcattcgcac
    17161 tggaaattgc aaaaaaacct gcaaatacga ccgcttgtat gagggcgact gctcgtcctg
    17221 cttttgagat taattttttc atagttcacc tcaagctaca ttattttgct tctgcttttg
    17281 gtgctgctac cggtttgtct gcttcttctg cgggtaataa acctttagca cgagcttctt
    17341 tttcccattg aggaaccaca gtttttaaga actcatcttt tgctgcttgc tctttaggaa
    17401 tatctaaacc aatagcaagt tgtgctttct ctttagttga gatgtccgga atcgccactg
    17461 gcgttgttac accgtgtttc gctaacacta cacctaattt agcacgggca tctgctgcac
    17521 ggtcgatacc tgttgcgatg gtacgtaaca ttacatcagg tgcgtggaag tggttaccgt
    17581 gacctgccgc agagtaatcc caacgccatt gagcgtgacg aattgccatt aagatctctt
    17641 tcatctcttc ttgagttgct ccagcttccc aagcagcttt cgcttcaaag tgagctttca
    17701 ctaattgatc ttctaagcga atcattgcct cttttacttc gtgtttatac tcttttacac
    17761 gtttttccaa tgtttctttg ctttgttcat gacaagtttt acaagtcgct tcaaattggt
    17821 caaacggatt accgattttg tggtcagtat aaactttgcc gtctttgtct ttcacttttg
    17881 gcatatggca atcaatacag gttacaccat ttttcccatg tgtaccttgt gaccaaactt
    17941 caaaatctgg gtgctgcgtt tttagcatcg gagctttcga taaagcatga gtccagtctg
    18001 taaaattgat ttcatcgtag tatttttcaa tgctatctac atctacacct ttatcccaag
    18061 ggaaagttac atctgtttta tttttgaaat agtactccac atggcagtta gcgcacacag
    18121 cagggcgttt accatgttta tctaaatcct caaacttcca accaaccgta ttcaatgcac
    18181 gtaatacgtg aggacgtgca acacgtagtg caggtttacc ttgtttaaac tcttctgatg
    18241 tcgtgtcatg gcagtctgca caacctattg agtttacaat ttcagcacca tatttcgccc
    18301 atttaggatc aaaatatcct cgctcacctt tctcctcaat taagcgtgga acatcagggc
    18361 ctttacatgt ccaacaagcc ataggttgtg gaccatcatt ttcatcttta ggcgcgccgg
    18421 tgcgcaaaat atcacgcaca tcggtaactg cataaaagtg acctcgtggt ttattataat
    18481 ctttcgcaaa agcatagcct gcccacaaaa taacataacg agggtcagcc tctaacgcac
    18541 ttcctcgatc tgtggatttt gcagttgact tccaagaatc gtattgtagc ggatattttt
    18601 ctgcaaatag gtggtttgca gactcaattt tcacgcctaa tttttcatgc ttaactgctt
    18661 tatctgttaa tgattcagtt ttcgcctctt cagctaaagc agtttgtaaa caccccaata
    18721 ttgaaattgt tgccacagct aggcttttta ttaaaaattt cattttgg
//
LOCUS       DANLZQ010000038        18598 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.038, whole genome shotgun sequence.
ACCESSION   DANLZQ010000038 DANLZQ010000000
VERSION     DANLZQ010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 18598)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18598)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18598
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.038"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            114..761
                     /locus_tag="PXE50_001216"
     CDS             114..761
                     /locus_tag="PXE50_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1440 domain-containing protein"
                     /protein_id="HDL5622140.1"
                     /translation="MSIFQQTNPNRRRYGLAVFIGIIAGIISAFVKWGAEHPFPPRSP
                     IDLFTAACPQPVLDAMNAAADQVAAKTIALQECSRAFLNPPHVFLRDYIGIDPTEAAF
                     TFADHAFNWIGVTHMIFSLVFAIGYCIVAEIFPKIKFWQGIGAGIIANICVHYITFPA
                     LGLTPPVAEWPLYEHISELVGHIFWFWTIEVIRRDLRNRITREPDAEVPLDQPFR"
     gene            complement(894..2270)
                     /gene="trkA"
                     /locus_tag="PXE50_001217"
     CDS             complement(894..2270)
                     /gene="trkA"
                     /locus_tag="PXE50_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HDL5622141.1"
                     /translation="MKVIILGAGQVGSTLAENLVSEDNDIVLVDNDPTRLDKLKDKHD
                     LQVIRGEYASPQTLRDAGAGDADLLVAVTNSDEVNMIACQIAYTLFNVPTKIARIRSA
                     DYVRERERLFNDDVLPIDHIIAPEILVKEDILRLIHYPGALQITHFADELVSIVNVKA
                     YYGGPLVGYPISALRDHLPHIDARVVAIFRQDKAIVPQGSTIIEAGDEVFFICATQHI
                     RAVMSELQRLDRPHKRIMIVGGGSIGSSLARDLEDQYRVKIIERNPVRAEKLAEKLSK
                     TMVLTGDASDEELLFEEHIENIDLFLAVTSDDEANIMSALLAKRLGAKKVIILVQRPA
                     YLHLIQGGTIDIAISPQQATISALASYVRKGDILQVSSLKLGVAGAVEIIAHGDATTS
                     KVVGRQIRELKLPQGAIVGAVVRGEEVIIAHKSTMIAENDRVIIFVNDKKQIDEIEKL
                     FQLGVFFL"
     gene            complement(2270..3601)
                     /gene="rsmB"
                     /locus_tag="PXE50_001218"
     CDS             complement(2270..3601)
                     /gene="rsmB"
                     /locus_tag="PXE50_001218"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015431887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HDL5622142.1"
                     /translation="MKKQSFKALSSRAISATIILQVLDQGKSLSTLIPDAQKQLEPKD
                     LPLVQEITFGVCRVLPRLESIIKLLVEKPLKGKTRLVHCLLLVGLYQLLYMRVPAHAA
                     VDEVVNATKTLKLDSFRALTNGVLRRFLREQEEILAKVDKHWQTLHPEWLVNKLKKAY
                     PNWREIVEANNQRPPMWIRVNQQHIKTNDYAALISELVEPEFAKNSENPTACVPKCAL
                     LLERAVNVNQLPHFEQGWATVQDAHAQWSAELLGAENGETVLDACAAPGGKTTHILEK
                     APKAKVMALDIEESRLSRVRENLVRLGQIAQVICGDASKPEEWLEEGVLFDRILLDAP
                     CSATGVIRRHPDIKWLRKEGDIAELATLQGEILKALWQRLKPNGILLYATCSVLPQEN
                     SEQIQRFLQDTPNAKQLEIDFNGEKVLEKQFFPQPNGGDGFFYAKLQKVAE"
     gene            complement(3653..4078)
                     /locus_tag="PXE50_001219"
     CDS             complement(3653..4078)
                     /locus_tag="PXE50_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HDL5622143.1"
                     /translation="MYNKLLIAIDLADLKSAKYVVDTALQMTAKNPNAVYRVVSIIEP
                     VDNSLISAFLPKNFDKEVVAEANQKLHEFTKNHFPEGSKVQHIVAYGTIYEEICRIAD
                     EKSVDLIMMLASSKPNAKGLSSNTVKVARNTTKPILVLR"
     gene            complement(4171..6819)
                     /locus_tag="PXE50_001220"
     CDS             complement(4171..6819)
                     /locus_tag="PXE50_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter permease"
                     /protein_id="HDL5622144.1"
                     /translation="MSVESKVDYDDLQDMVASNDSGGRTPSGLAKKAIVYVAILWSVF
                     QIYYASPLPFVFQEWLTHAGINLNVVVDDTKARSIHLAFAMFLAFLSYPAFASSPKHH
                     IPKIDWVFAIVGAGLALYYIFFYEGLVKRFGAPNTQDIIAGCLGILLVLEATRRSLGL
                     PLVIIAIVFLIYNFFGQYFPADWIVSHRSGSLSQIINQQWITTEGVFGVALGVSTKYV
                     FLFVLFGALLDKAGAGNYFIKTAFAYLGHLRGGPAKAAVVSSALTGLISGSSIANVVT
                     TGTFTIPMMKRVGFTKEKAGAVEVASSVNGQIMPPVMGAAAFLMIEYVNMPYSQLITH
                     AFLPALISYIALVYIVHLEACKMNLQGLPRAEEPSPILVFLLRTVASILVIVGLAIGV
                     YYGLGWIRDVAEDYAFMIVCAFLGLWYLLAIRRVASYPDLEADDPNSEIVSLPKRKPT
                     VNAGLHYLIPVVVLLWCLMVEMLSPGLSAFWGTITLIFIQLTQRPLLNFFRKESVTKE
                     IIKQGVRDVVDSLEAGGRNMTGIALATATAGIIVGVVALTGFGVQLSSVIELLSMGNI
                     VLMLILVAVFSLILGMGLPTTANYIVVSSLMATVIMEVGRQNGLIVPLIAVHLFVFYF
                     GIMADVTPPVGLASFAAAAISGGSPINTGMVAFKYSLRTVILPFLFIFNTDLLLIDLR
                     YPGHGWVVFITATVGVLAFTSATMQYIVTKNKWWETALLVVAAFALFRPGFFMDRIYP
                     SERHIEPVQFEEQLLASKVGQNVTLKVEGLNPYGKEIEFYAQLPVPEGATGEERLKNL
                     GLTLIQTDEKIKVDGVETPKVVIDMVEMDSPAAKAGLNWDQTIHYIAVPQDAPSKDWI
                     FIPALLLVFGIVANQRRRVKKQCVIA"
     gene            complement(7021..7983)
                     /locus_tag="PXE50_001221"
     CDS             complement(7021..7983)
                     /locus_tag="PXE50_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005761780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HDL5622145.1"
                     /translation="MKKLVKLSFLASLVMGTASVQAAETFVTIGTGGQTGVYYVVGQS
                     ICQLVNRDSAKTGLKCNAPSTGASVANLNAIAAKEMDMGIAQSDWQYHAYNGSSSFEG
                     KKNDKIRAIFSLHPEPFTVMARTDSGIKSFDDLKAKRVNVGDPGSGTRATMNVILAAK
                     GWTDKDFKVASELKPAEMASVMCDNNLDAITYNVGHPNGALKEAAASCDAKLVPVTGP
                     EIDKLVADHSYYAKATIPGGLYKGSDEPTETFGVYATLVTSADVDADKVYNVTKAVFD
                     NFDRFKRLHPAFEHLKQEEMIKNALSAPLHEGAIRYYKEKGWIK"
     gene            complement(8167..10014)
                     /gene="selB"
                     /locus_tag="PXE50_001222"
     CDS             complement(8167..10014)
                     /gene="selB"
                     /locus_tag="PXE50_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HDL5622146.1"
                     /translation="MIICTAGHVDHGKTSLLQALTGTNTAHLPEEQKRGLTIDLGYAY
                     LPIENDILGFIDVPGHQRFLSNMLAGLGGIQHALLVISAEEGIKPQTEEHLDILHLLN
                     FQHIMIVITKADRAEETQISHLIEQVKTSYPFLAEAKTFVTSAKTQQGIEELKAHLIQ
                     LNQQHTQTHKPFRYAIDRVFNVKGAGLVVTGTTVAGKVSVGSELFLSNGKKVRVKAIH
                     AQNTPSETGVAGQRLALNIANVEKEEIKRGDWITELEPKFATDRITVQLTANQAFKEN
                     SIVHLYHFASHITGKLNLLEGQQAVKNQQFFAEVILDEPLHIAVGDKLIIRSGDDSLT
                     LAGAEVLEIHSPKRHKRTEARLALVKNLAKTTACNDFATRLDLYLQNRAMDLSLLLWA
                     EQCFAEDIAKLGFDVSSKWLFNSDFKAQAQQRVLEKMAEYHLQHQDQIGVTKARLYRI
                     ALLDLPENLANQFIEDLVEQKALVNSRGWLHLPEHRIELNADELQIWQQIRPLFEATN
                     QALWVRDIASQLSIDETQMRNLLYKVGKLGYLIPIVKDRFLLSEQIGQFATLIKDFIA
                     QNGSISVNQLRDELQYGRKLTVQLIEYFDRSGFLRRKGDVHLLRDSETF"
     gene            complement(10024..10320)
                     /locus_tag="PXE50_001223"
     CDS             complement(10024..10320)
                     /locus_tag="PXE50_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5622147.1"
                     /translation="MMKFDYNIVWLQKAEIKLFYQADYILQQSQNPIIAEQFYDAIKS
                     EVDKLSFTADVYRLRKKKEIPILNGKYQVKFLIGQENVYIVDFKSARQNSYSFL"
     gene            complement(10317..10493)
                     /locus_tag="PXE50_001224"
     CDS             complement(10317..10493)
                     /locus_tag="PXE50_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622148.1"
                     /translation="MELILAQDLAKLRTDKPQSFYTNDELDLLHQLENGLIETKSHAQ
                     VMEDLRKKLGITEK"
     gene            complement(10562..11194)
                     /gene="pdxH"
                     /locus_tag="PXE50_001225"
     CDS             complement(10562..11194)
                     /gene="pdxH"
                     /locus_tag="PXE50_001225"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005575912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HDL5622149.1"
                     /translation="MDLHHIREDYTKKVLSIRDCHSNPITQFEQWLSEAINAKVNEPT
                     AMNIATVAANGRPSSRMVLLKEVNSQGFVFFTNYQSRKGWEIADNPFGCLTFFWAELQ
                     RQVRIEGKIAKIPEAESDAYFDSRPYTSRLGAWASEQSQPIENYKALLLKSAQFALKY
                     PLSVPRPPHWGGYILIPDSIELWQGRSSRLHDRIHYWLENNEWKKERLSP"
     gene            complement(11252..12634)
                     /locus_tag="PXE50_001226"
     CDS             complement(11252..12634)
                     /locus_tag="PXE50_001226"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HDL5622150.1"
                     /translation="MQQLFRQIPSLDLLLKKPQAVELCQKFAYSSVAEQARSLLTQAR
                     QFISQQQALPDFIADENLFFIRLEQKVQALSEVKIRSVFNLTGTVLHTNLGRGLWSEK
                     AIQAATNAMRNNVALEFDIEAGKRSHRDNYISELLQILTGAEAACIVNNNAAAVLLML
                     ATFAQGKEVIVSRGELVEIGGAFRIPDIMAQAGCKLVEVGTTNRTHLKDYRNAITENT
                     AFLMKVHTSNYHIEGFTSSVSEEELVALGKEFNLPVITDLGSGSLTDMQALNLPAEPK
                     VQQKVAAGVDLVSFSGDKLLGGPQAGIIVGSQAMISQLQQHPLKRVLRCDKVILSALE
                     ATLRHYLFPEQLTDNLPTLHLLTQPLETLQHKAERLKQALHKRLNSAYILQIELSLAQ
                     IGSGALPTETLPSVAVTISAEKQSDLIALEQQFKTYPSPIIGRFAQQKFWLDLRSVAE
                     FDKLIEMLEY"
     gene            12702..12796
                     /locus_tag="PXE50_001227"
     tRNA            12702..12796
                     /locus_tag="PXE50_001227"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12736..12738,aa:Sec,seq:tca)
     gene            13003..13692
                     /locus_tag="PXE50_001228"
     CDS             13003..13692
                     /locus_tag="PXE50_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine-6-phosphate 2-epimerase"
                     /protein_id="HDL5622151.1"
                     /translation="MSTLSRDSILSQIQNGLIASCQPVDDGPMDKPEIVAAMAAASVI
                     GGAKGIRIEGVDNLKAARAAVNVPIIGIVKRDLPDSPVRITPFLEDIDALAEAGADII
                     AVDGTFRTRPVSIEEAVKRIHEKGCLAMADCSTLEEGLHCQQLGFDIVGSTMSGYTGG
                     EMPDEPDYQLVKDLKAAGCNVMAEGRYNTPELAKTAIEIGADYVTVGSALTRLEHIVS
                     WFADSVKSAQK"
     gene            13702..14604
                     /locus_tag="PXE50_001229"
     CDS             13702..14604
                     /locus_tag="PXE50_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine kinase"
                     /protein_id="HDL5622152.1"
                     /translation="MRCLAIDIGGTKIATAIVQHNQVSQRQQIQTPTDKPQADQAGSL
                     HQAIGEIMQHYQGQFDFVAVASTGIINKGVLTALNPKNLGGLAEFPLKQSIEKHTDKP
                     IALLNDVQAAVCAEYLNEDQQAVKNFVFITVSTGVGGGIILNGELQIGSNGIAGHIGH
                     TLADPNGPLCGCGRVGCVEAVAAGRAIEAVSSQWEKPCSPKEVFERFRQGNPQAVELV
                     QKSAKAIANLIADLKISLDIQKVVLGGSVGLAEGYLPQVSNYLAEMPSVYHCVLENAL
                     SGQDAGLIGAAWWAENQLNQGFTL"
     gene            14629..15507
                     /gene="nanA"
                     /locus_tag="PXE50_001230"
     CDS             14629..15507
                     /gene="nanA"
                     /locus_tag="PXE50_001230"
                     /EC_number="4.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005718701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate lyase"
                     /protein_id="HDL5622153.1"
                     /translation="MKNLKGIFSALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYV
                     GGSTGENFMLSTEEKKEIFRIAKDEAKDEIALIAQVGSVNLKEAVELGKYATELGYDS
                     LSAVTPFYYKFSFPEIKNFYETIIRETGNKMIVYSIPFLTGVNIGVSQFAELFENEKI
                     IGVKFTAGDFYLLERLRKAFPNHLIYAGFDEMMLPATVLGVDGAIGSTFNVNGIRARQ
                     IFELAQQGKIKEAFEIQNVTNDLIEGILGNGLYQTIKGLLELEGVQAGYCREPMTKEQ
                     TPAQKEVTKQLKAKFL"
     gene            complement(15568..15774)
                     /locus_tag="PXE50_001231"
     CDS             complement(15568..15774)
                     /locus_tag="PXE50_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622154.1"
                     /translation="MDNKQTNGFNDIIVKADITQNIWSTGFYDIGRELKSENTRQEKV
                     RLKYNGDTLHRGRKSRMASLIASR"
     gene            complement(15732..16370)
                     /locus_tag="PXE50_001232"
     CDS             complement(15732..16370)
                     /locus_tag="PXE50_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622155.1"
                     /translation="MKKILLLVLLLTLATQADEGNNTQVCAEQQHQIIAHYFKISQEK
                     LSARTLASACKTAPNNSTETLVSYAVIEPKYSKENYQNDENTPKWTLFVARVNDNAIL
                     QSWEQDMEIDASIDVNADSLKIDTARYILNDKVRAFGVRFNNAARGPSAPEYSANDHL
                     MLFVPEKEKLKLVFDYPMTFWSILDDKETKTETQTWYCKWITNRPTASMILL"
     gene            complement(16612..17331)
                     /locus_tag="PXE50_001233"
     CDS             complement(16612..17331)
                     /locus_tag="PXE50_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5622156.1"
                     /translation="MSKPNIYDESFSERMKWIAKNSFKDNYSEFARAVGVAQASLSRW
                     VKGEADPSRSNLVKIAEVSNVSLEWLATGKESKPQSENTSIVAREFERLEKMADDIVS
                     MINSFRTINVSAGFGSFNEGVTKPDGQEPYADSLLQSLGVKAHNCGVFWANGTSMHPT
                     IADSDQMLVDFSKREPRGDDKIYLVQNGESVWVKRIRKEWDYIELISDNESYRPIQIT
                     AEEAQNLQIIGQVVHIGHSLV"
     gene            17508..17786
                     /locus_tag="PXE50_001234"
     CDS             17508..17786
                     /locus_tag="PXE50_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5622157.1"
                     /translation="MSVLNDVKKTAQRDWHKADILAELRKKGWSLRSLAKAGNVSHNT
                     LKSVLDKPYPKMERLVANAIGVAPEVIWAGRTAERIERNRRPTLTNKF"
     gene            17831..>18598
                     /locus_tag="PXE50_001235"
     CDS             17831..>18598
                     /locus_tag="PXE50_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL5622158.1"
                     /translation="MSELSLKTHYSVAELLSFKLSSLPSAHKNVLEKAIRENWQSQKR
                     KGRGGGVEYELISLPTEVQQEIRTKLLKLLPAEISKGELSVVRQNIDLEQITDKQLST
                     ADARIMVVRWFLMQEVQLGLSRTKTLDQVIAAVASSEIPAEICKAIMAGNSKAGGKLK
                     LSKRTLHSWVLAYEAGENSAERLKQMIPLKTQKRAVPERCGWLQAFLPFYQTFSNVAL
                     TQAYAQFAMQYEGEDLPTESQVRYALKQLPDYVVQQGR"
BASE COUNT         5326 a         4118 c         3780 g         5374 t
ORIGIN      
        1 tttgcaattt aaattaattg agtgcagaat gccattagcc ttttttgaaa tcacattcca
       61 taaaatggct tgattaacac aacacaatta tcactcaaat taggattttc attatgagta
      121 ttttccaaca aaccaatcca aaccgccgtc gttatgggct agctgtattt atcgggatta
      181 ttgccggtat tatttcagca ttcgtaaaat ggggggcaga acatcctttc ccacctcgta
      241 gccctatcga tctgtttacc gctgcttgcc cgcaacctgt gttagatgca atgaatgccg
      301 cagcagacca agtggctgcc aaaaccatcg cattacaaga atgttcacgt gcatttttaa
      361 acccaccaca cgttttctta cgtgattata ttggtatcga tccaactgaa gcagcattta
      421 cctttgctga ccacgcgttc aactggattg gtgtcaccca tatgattttc tcgttagtct
      481 ttgcgattgg ttactgcatt gtggcggaaa tcttcccaaa aattaaattc tggcaaggta
      541 tcggtgccgg tatcatcgct aatatttgtg ttcactacat caccttcccg gcattaggtt
      601 taacaccacc ggttgctgaa tggccgttat atgaacacat ttctgaatta gttggtcata
      661 ttttctggtt ctggaccatt gaggtgattc gtcgcgattt acgtaaccgt attacgcgtg
      721 aacctgatgc cgaagtgccg ttagatcaac cgttccgtta atttaaaatt agctcgattt
      781 atacaaaagc cgcaatcacg ttgcggcttt cttattttac aagcggtcaa attttcatga
      841 aaatttacca aacaaaaagc acattgtttc atgtagcaat gcggagcttg gctttataag
      901 aaaaatacac caagttggaa cagtttttca atttcatcga tctgtttctt atcgttcaca
      961 aaaataatca cacggtcatt ttctgcaatc atggtggatt tgtgggcgat aataacttct
     1021 tcgcctcgca ccaccgcccc aacaattgcc ccttgcggta gttttaattc acggatttgt
     1081 cgtccaacca cttttgaagt ggttgcatcg ccgtgagcga taatttctac cgctcctgca
     1141 accccaagtt tgagtgaaga aacttgtaaa atatcgcctt ttctaacgta actagcgaga
     1201 gcagaaatag tagcttgttg tggggaaatg gcaatatcaa tagtgccacc ttgaatcagg
     1261 tgtaaatagg cagggcgttg cactaaaata atcacttttt tcgccccaag ccgttttgcc
     1321 agcagggcgg acataatatt cgcttcatca tcactggtga cggcaaggaa taaatcaata
     1381 ttctcaatat gctcctcaaa cagcaactct tcatcggagg catcaccggt aagcaccatc
     1441 gttttagata gtttttctgc taatttttcg gctcgaaccg gattgcgttc gataattttt
     1501 acccgatact gatcttctaa atcccgagct aacgaagagc cgatgctccc tccaccgaca
     1561 atcataatcc gcttatgtgg gcgatcaagc cgttgtagtt cactcattac tgctcgaata
     1621 tgttgggttg cacagatgaa aaagacttca tcacctgcct caataatagt tgaaccttgt
     1681 ggcacaatcg ctttgtcttg gcggaaaatt gccacgaccc gagcatcaat atgcggtaaa
     1741 tgatcacgca gggctgaaat cgggtaaccg accaaaggcc caccgtaata ggcttttaca
     1801 ttcacgatac tgactaactc atcagcaaaa tgagtaattt gcaacgcccc cggatagtga
     1861 ataaggcgta aaatatcttc tttgactaaa atttcagggg caataatatg gtcaataggc
     1921 aatacatcat cattaaacaa ccgctctcgt tctctcacat aatcagcact gcgaatacgg
     1981 gcaattttgg tcggcacatt aaataaagtg taagcaattt ggcaagcgat catattcact
     2041 tcatcactat tagttacagc aactaataga tcagcatcac ctgcaccggc atcacgcaag
     2101 gtttgaggtg aagcatattc gccccgaatc acctgtaaat cgtgtttatc tttgagcttg
     2161 tctaaacgag ttgggtcatt atccaccaag acaatatcat tgtcttcact caccaaattt
     2221 tctgccagcg tagaaccaac ttgtcctgcc cctaaaataa ttactttcat tactctgcca
     2281 ctttttgtag ttttgcgtag aagaaaccat caccaccgtt tggttgtggg aagaactgtt
     2341 tttctaacac tttttcgccg ttaaaatcga tttcaagttg ttttgcattc ggtgtatctt
     2401 gtaaaaaccg ttgaatttgc tcgctatttt cttgcggtaa caccgagcaa gtggcatata
     2461 acaaaatgcc gtttggcttt aacctttgcc ataacgcctt gagaatctca ccctgtaatg
     2521 tggctaattc tgcaatatca ccctctttac gcaaccattt aatatcaggg tggcggcgaa
     2581 tgactccggt tgcggaacaa ggggcatcaa gtaaaatgcg gtcaaacagc acaccctctt
     2641 caagccattc ctcaggtttg gaagcatcgc cacaaattac ctgtgcaatc tgccccagtc
     2701 ggactaagtt ttcacgcact cggcttaaac ggctctcttc aatatccaac gccataacct
     2761 ttgctttcgg tgctttttct aaaatatggg tagttttgcc acccggtgcg gcacaggcat
     2821 ctaaaacggt ttcaccattt tctgccccga gcaactccgc tgaccattgt gcgtgagcat
     2881 cttgcacggt tgcccaacct tgctcgaaat gtggcagttg gttcacattt accgctctct
     2941 ccagcaataa agcacacttt ggcacgcaag cggtcggatt ttctgaattt tttgcaaatt
     3001 caggctcaac cagctcgcta atcaacgccg cataatcatt ggtcttgata tgttgttgat
     3061 tgactcgaat ccacattggt gggcgttggt tgtttgcttc aacaatttct cgccagttcg
     3121 gataggcttt tttaagttta ttgaccaacc attcagggtg gagcgtttgc caatgtttat
     3181 ctaccttcgc taagatttct tcttgctctc gcagaaaacg gcgtagcaca ccgttagtca
     3241 aggctcggaa gctatccagt tttagcgttt tagttgcatt cactacctca tcaaccgcag
     3301 cgtgtgccgg cactcgcata taaagcagtt ggtataaacc cactaacagt aagcaatgca
     3361 ccaaacgggt tttgcctttc agcggttttt caactaataa tttgatgatc gattccaagc
     3421 gaggcagcac acggcacact ccgaaggtga tttcttgcac taagggtaaa tcttttggtt
     3481 caagctgttt ttgagcgtca ggaatcaagg tggaaagtga tttaccttga tctaacacct
     3541 gtaaaataat ggttgcactt attgctctag aagaaagtgc tttgaacgat tgttttttca
     3601 taaataaaaa tgccattccg acagaatggc actattgtaa ctgaatgcgg gattatctta
     3661 aaactaaaat tggcttggtg gtgttgcgag ccactttaac cgtattagag cttaagccct
     3721 tcgcatttgg tttgctgctt gccagcatca taattaaatc caccgacttt tcatcggcaa
     3781 tacggcaaat ttcttcataa atcgtaccat acgccacaat gtgctgcact tttgaacctt
     3841 caggaaaatg gtttttggta aattcgtgca atttttggtt tgcttcagcc accacttctt
     3901 tatcgaaatt tttcggcaag aatgcagaaa ttaagctgtt atccaccggc tcaataatag
     3961 acacaacccg ataaaccgca ttcggatttt ttgccgtcat ttgtaatgcc gtatctacca
     4021 catatttagc actttttagg tcggctaaat caatcgcaat aagtaatttg ttatacatat
     4081 ttattccgta ggggcaggtc ctgtgcctgc ccgaatatta actaaaatag cggacgggca
     4141 caggacccgt ccctacatag catataaata ctatgcaata acacactgtt ttttcactct
     4201 acggcgttgg tttgccacaa taccaaatac caacaataga gcaggaatga agatccaatc
     4261 tttagaagga gcatcttgcg gtacggcaat gtagtgaatg gtttgatccc agtttaagcc
     4321 tgctttagct gccggagaat ccatttctac catatcaatc accacttttg gtgtttctac
     4381 gccatcaact ttgatttttt catcggtttg aattagcgtt aagcctaagt ttttcaaacg
     4441 ctcttcgccg gttgctcctt ccggtacagg taattgagcg tagaactcaa tttctttacc
     4501 gtaagggttt aatccctcta cttttaaagt aacattttga cctactttgc ttgcaagcaa
     4561 ctgttcttca aactgcaccg gctcgatatg acgttcagac ggataaattc tgtccataaa
     4621 gaagcccgga cggaacaagg cgaaagcggc tacaaccagc aacgccgttt cccaccattt
     4681 gtttttagtc acaatatatt gcattgtagc agaggtaaag gcgagaaccc caacagttgc
     4741 ggtaataaac acaacccagc cgtgccccgg ataacgcaga tcaattaata ataaatcggt
     4801 attaaaaata aataagaacg gtaaaatgac ggttcttaaa ctatatttaa atgccaccat
     4861 accggtatta atcgggctac cgcctgaaat tgctgccgca gcgaacgagg ctaaaccaac
     4921 aggtggagtc acatctgcca taatcccaaa atagaatacg aataaatgca ccgcaatcaa
     4981 cggcacgatt aacccgtttt gacgaccgac ttccatgata accgttgcca ttaatgatga
     5041 caccacaatg tagtttgcag ttgtcggtaa gcccattccc aaaattaagc tgaatacggc
     5101 taccaagatc aacattagca caatgttgcc cattgatagg agttcaatca cacttgaaag
     5161 ctgaacccca aagcccgtta gtgccacaac gccgacaata atccctgctg ttgcggtagc
     5221 gagggcgata ccggtcatat tacgaccgcc agcctcaagg ctatctacca catctcgaac
     5281 accttgtttg ataatctctt tggttacgct ctctttacgg aagaaattca gtaacgggcg
     5341 ttgggttaat tgaataaaaa ttaaggtaat ggttccccag aatgcggata agcccggcga
     5401 aagcatttcc accattaagc accaaagtag cacaaccaca ggaataaggt aatgtaaacc
     5461 tgcatttacg gttggttttc tttttggtag agaaacaatt tctgagtttg gatcgtccgc
     5521 ttctaaatca gggtagcttg ccacacggcg aatagccagt agataccata agcctaagaa
     5581 agcacagaca atcataaacg cataatcttc tgccacatca cgaatccaac ctaagccgta
     5641 gtaaacgcca atcgctaatc ctacgatcac taaaattgaa gctacggttc ttagcaagaa
     5701 gactaaaatc gggcttggct cttcggctct tggtaagcct tgtaaattca tcttacaagc
     5761 ttctaaatgc acgatataca ccaacgcaat atacgaaatt aacgcaggta agaaggcgtg
     5821 agtaatcagc tggctatacg gcatattcac atattcgatc atcaagaacg ctgcagcccc
     5881 cattaccggt ggcataattt gaccgtttac tgatgaggca acttccaccg caccggcttt
     5941 ttctttggta aagccgaccc gtttcatcat tggaatagtg aatgtacctg tcgtcacgac
     6001 gtttgcaatc gaagagcctg aaatcaagcc ggttaaagcg gaagaaacca ccgccgcttt
     6061 tgccggacca ccacgcaaat gccctaaata ggcaaaggcg gttttaataa agtagttacc
     6121 tgctcctgct ttatcgagca acgccccaaa taatacgaac aggaacacat atttggtcga
     6181 aaccccaagg gctacaccaa acacgccttc agtggtaatc cattgttggt tgataatttg
     6241 agaaagcgaa cctgagcggt ggcttacaat ccaatctgcc gggaaatatt gcccgaagaa
     6301 gttatagatc aggaatacaa tcgcaataat cacaagcggt aagccaagac tacggcgggt
     6361 cgcttccagc accaataaaa tccctaaaca gccggcgata atatcttgcg tatttggcgc
     6421 tccaaaacgt ttcaccaaac cttcatagaa gaaaatataa tacaacgcta acccagctcc
     6481 tacgatggca aacacccaat ctattttagg aatatgatgt ttaggcgagc tggcaaaagc
     6541 agggtaagat aggaacgcca agaacattgc aaaggctaag tggatagaac gggctttggt
     6601 gtcgtccacc accacattca aattaatgcc tgcgtgagta agccattctt ggaatacaaa
     6661 cggcaatgga gaagcataat aaatttggaa cacagaccaa agaatggcga catacacaat
     6721 ggcttttttc gcaagaccgg acggggttcg ccccccactg tcattggagg caaccatatc
     6781 ttgtaggtca tcgtaatcaa ccttagattc aactgacata aagactcctc aaaacgcaag
     6841 cggtcatttt cttattaaat tttacaaatt tcctcaaaaa acaaccgctt gctcgtgaaa
     6901 acactgttga taagttatca attaaaggtg aaaatcgata acttatcaac agtttcaaaa
     6961 aagcaaaaaa ccagcacgct aaaaaacgtg ctgattgaat caaattacag aaaggaaata
     7021 ttacttaatc caacctttct ctttatagta acgaattgca ccttcgtgta acggagcaga
     7081 aagggcgttt ttgatcatct cttcttgttt taagtgttca aacgccggat gtaaacgttt
     7141 gaaacggtcg aagttatcaa ataccgcttt ggttacattg tacactttat ctgcatccac
     7201 atcggcagaa gtcactaacg ttgcatatac accgaaggtt tctgtcggct catccgaacc
     7261 tttatataaa ccgcccggaa tcgtagcttt ggcataatat gagtgatctg ccactaattt
     7321 atcaatttca gggccggtta ccggcactaa tttcgcatcg caagaagcgg ctgcttcttt
     7381 taacgcacca ttcgggtgac ctacgttata agtgatggca tctaagttgt tatcacacat
     7441 tacagatgcc atttctgccg gtttcaattc agaagccact ttgaaatctt tatccgtcca
     7501 gccttttgcc gctaaaatca cgttcattgt tgcacgagta ccggaacccg ggtcgcccac
     7561 gtttacacgt tttgctttta aatcatcgaa cgatttaatg cctgaatcgg tacgagccat
     7621 tactgtaaac ggttccgggt gaagcgagaa aatggcacga attttatcgt ttttcttacc
     7681 ttcaaatgag cttgagccgt tataggcgtg gtattgccag tctgattgtg caatccccat
     7741 atccatttct tttgctgcaa tcgcatttaa gtttgcaacc gatgcccctg ttgaaggagc
     7801 gttacatttt aaacctgttt ttgctgaatc acggtttact aattggcaaa tagattgacc
     7861 cacaacataa taaacaccgg tttgaccgcc tgttccgata gtcacaaatg tttcagccgc
     7921 ttgaacagat gctgttccca tcacaaggct tgcaaggaaa gaaagtttga ctaatttttt
     7981 catttttaac tcctaaaatt aaggatcaga aaacaaagat ttattgtttt gagccactgc
     8041 tcacactaca agagatacaa aacttctttg agttgcattt gcctcttaga gcttgttttt
     8101 agcatagatt ttataattag taaatttatt ttttcgcata aaaaaatcta tgcctaatgc
     8161 cacaagctaa aatgtttcac tatctcttaa caaatgcaca tcgccttttc gtcttaaaaa
     8221 accgctacga tcaaaatatt caattaattg taccgtcaat tttcgcccat actgcaactc
     8281 atctcgcaac tggttcaccg aaatgctgcc gttttgggcg ataaaatctt taattaacgt
     8341 tgcaaattgc ccgatttgtt cgcttaataa aaatctatct ttgacgattg ggattaaata
     8401 gcccaatttc ccgactttat acagcaaatt ccgcatttgg gtttcatcaa tcgagagctg
     8461 gcttgcaata tccctcaccc aaagagcttg attggttgcc tcaaacagcg gtcgaatttg
     8521 ttgccaaatt tgcaattcat cggcgttcaa ttcgattcga tgttccggca aatgtaacca
     8581 accacgacta ttgaccaagg ctttttgctc caccaaatcc tcaataaatt gatttgccaa
     8641 gttttcaggc aaatccaata acgctatgcg atataaacga gctttggtca cgccgatttg
     8701 atcttgatgt tgcaggtggt attctgccat tttttccaac acccgttgct gggcttgagc
     8761 tttaaaatcc gaattaaata accatttaga cgagacatca aaccccagtt ttgcaatatc
     8821 ctctgcaaaa cattgctccg cccataacag caaggataaa tccatcgctc tgttttgcag
     8881 atagagatca aggcgtgtcg caaagtcatt acaagcggtg gtttttgcta aattttttac
     8941 caaagctaaa cgggcttcgg tacgtttatg ccgttttggt gagtgaattt ccagcacctc
     9001 cgctccggct aacgttaggc tgtcatcacc gctgcggatg atcaacttat caccaacggc
     9061 aatatgaagt ggttcatcta aaatcacttc tgcaaaaaat tgctgatttt tgaccgcttg
     9121 ttgcccctca agcaaattca atttgccggt aatgtgcgaa gcaaaatggt aaagatgcac
     9181 aatgctgttt tctttgaagg cttgattggc agtgagttga accgtaatgc gatcggtggc
     9241 aaatttcggc tcaagctcgg taatccaatc gcctcgcttg atttcctctt tttccacgtt
     9301 agcgatattt aacgccaaac gttgccctgc cactcccgtt tccgaaggcg tattttgggc
     9361 gtgaatcgct ttgacccgca cttttttacc attcgacaaa aataactcag agccaacgct
     9421 cacttttccc gccaccgttg tgccggtaac gaccaaccct gctcctttca cattaaacac
     9481 acggtcaatc gcataacgga acggtttatg ggtttgggta tgttgttgat ttaattgaat
     9541 taaatgtgct tttaattctt caatcccttg ttgcgttttt gccgaagtaa caaaggtttt
     9601 tgcttccgct aaaaacggat agcttgtttt cacttgctca attaagtggc tgatttgagt
     9661 ttcttccgcc cgatctgcct tagtaatcac aatcataata tgctggaaat tcagcaggtg
     9721 gagaatatcc aaatgctctt cggtttgtgg cttaatccct tcttcggcag aaatcaccaa
     9781 cagggcgtgt tgaatgccgc caagccctgc cagcatatta gataaaaaac gctgatgacc
     9841 cggcacatca ataaacccta aaatatcgtt ctcaatcggt aaataggcat agcccaaatc
     9901 aatggttagc ccacgttttt gttcttcggg caaatgggcg gtgttagtgc cggttaaggc
     9961 ttgtaaaagc gatgttttgc cgtggtcaac gtgaccggcg gtgcagatga tcattgatag
    10021 tccttataaa aatgagtaac tattctggcg agcagattta aaatctacaa tatagacatt
    10081 ttcctgacca atcaggaact ttacttggta cttaccgttt aaaatgggaa tttctttttt
    10141 cttgcgaagt cgataaacat cggcagtaaa ggaaagttta tccacttcac tttttattgc
    10201 atcataaaat tgttctgcaa taatcgggtt ttgggattgt tgtaatatat aatctgcttg
    10261 ataaaacaat tttatttctg ctttctgtag ccaaacaata ttgtaatcaa acttcatcat
    10321 ttttccgtga ttcccaattt tttgcgtaaa tcttccatca cctgagcgtg ggatttagtt
    10381 tcaattaagc cattttctaa ttgatgtaat aaatcaagtt catcattagt ataaaaactt
    10441 tgtggcttat ctgtgcgtaa ttttgctaaa tcttgtgcga gtatgagttc catatttccc
    10501 ccttacaaac ttagattatt caatattgta acctgataaa actaaagttc aaggagtgta
    10561 tttaaggcga taaccgctct tttttccact cattattttc caaccaataa tgaatgcggt
    10621 cgtgtagccg gctacttctg ccttgccaga gttcaatact gtcgggaatc agaatatagc
    10681 caccccaatg cggtgggcga ggcactgaaa gtggatattt caatgcaaat tgagctgatt
    10741 ttagcaacaa agccttgtag ttttcgatag gctgactctg ctcgctcgcc caagccccca
    10801 aacggctggt gtaaggacga gagtcaaaat aggcatcgga ttctgcctct ggaatttttg
    10861 ctattttccc ttcaatccgc acttgacgtt gtaattctgc ccaaaagaag gttaaacatc
    10921 caaaaggatt atcggcaatt tcccaccctt tacggctttg ataattggta aagaacacaa
    10981 agccttgtga atttacctct ttcaacagca ccattcggct acttggtcgc ccgtttgctg
    11041 caacggtagc aatattcatt gctgtcggct cattcacttt ggcattgatt gcctcactca
    11101 accattgttc aaattgggtg attgggtttg agtgacaatc tcggattgaa agcacttttt
    11161 tggtgtaatc ttctcgaatg tggtgcagat ccataaggat tcctttatct tattctaaat
    11221 aatcggacag gcacagtctg ccctaccaaa attaatattc caacatctca atcaacttat
    11281 caaactccgc gaccgagcgt aaatctaacc aaaatttctg ctgagcaaaa cgcccgataa
    11341 tcgggcttgg gtaggtttta aattgttgtt ccaatgcaat taaatcgctc tgtttttcag
    11401 cggaaatagt cactgccacc gaaggtaagg tttctgtggg taacgcaccg ctgccgattt
    11461 gagcgaggct tagctcaatt tgcaaaatat aagcagaatt taaccgcttg tgtagtgcct
    11521 gttttaatcg ctctgctttg tgttgcaagg tttcaagcgg ttgagtgagt aaatgaagag
    11581 tcggcaagtt atcggttaat tgctccggaa ataagtagtg gcgtagcgtt gcctcaagtg
    11641 ccgataaaat cactttatcg caacgtagca cccgttttag cgggtgttgt tgcagttggc
    11701 taatcatcgc ttggctaccg acaataatgc cggcttgcgg cccgcctaat aatttatcgc
    11761 cagagaagga aaccaaatct accccagccg ctactttttg ctgaaccttt ggctcagcag
    11821 gcaaattaag agcttgcata tcagttagcg aaccactgcc taagtcggta atcacaggca
    11881 ggttaaactc tttaccgaga gccaccaatt cctcttccga caccgaactg gtgaacccct
    11941 caatgtggta gttactggtg tgaactttca ttaaaaaggc ggtattttcg gtgatcgcgt
    12001 tgcgataatc ctttaaatga gtgcgattag tcgtaccaac ttccaccaat ttgcaaccgg
    12061 cttgagccat aatatccgga atgcggaatg ccccgccaat ttccaccagc tcgccacggg
    12121 aaacgatgac ttccttgcct tgtgcgaagg ttgctaacat caacaacacc gctgccgcat
    12181 tattattcac aatgcaagcg gcctccgctc cggtaagtat ttgcaacaac tcggaaatgt
    12241 agttatctcg gtgcgagcgc ttgcctgctt caatatcaaa ttccaacgcc acattgtttc
    12301 gcattgcgtt ggttgctgcc tgtatcgcct tttccgacca caacccacgc cctaagttgg
    12361 tgtgtaacac cgtaccggtt aagttgaaca cggaacggat tttcacctca ctcaacgctt
    12421 gcactttttg ttccagcctt ataaaaaaca ggttttcatc ggcaataaaa tccggcaagg
    12481 cttgctgttg ggaaataaat tgacgtgctt gagtaagcaa actcctagct tgttcagcca
    12541 cgctggaata tgcaaatttt tggcataatt cgaccgcttg tggctttttc aacaagaggt
    12601 cgagcgaggg aatttggcga aatagttgtt gcataatgtg aatgattgag agaatatttt
    12661 ggacaattct aataaataaa gtacaatatt gccaattttt cggaagtgcg tcatctccgg
    12721 tgaggtggca ggacttcaaa tcctgttgag gacgccagcg ttctcgggtg ggttcaactc
    12781 ccatgcactt ccgccacatt tcaaaagccg ttaatcttta acggcttttt gcatttctgc
    12841 cacattctct ctttccgttt tgataaaaaa tgagacttag ctcacatttt tttatttttc
    12901 tgtttgtagt aaaaatttat taaattataa ttatttggag tattttttca caaacaaaat
    12961 ctagtccatt gactaccttt tgaacataaa aaaggaactg ttatgtcaac actatctcgt
    13021 gattctattt taagtcaaat tcaaaacggg ctgattgcct cctgccaacc ggttgatgac
    13081 ggccccatgg ataaacctga aattgtcgcc gcaatggcag cagcctctgt gattggtggt
    13141 gctaaaggca ttcgcattga aggtgtcgat aatttaaaag ccgctcgtgc ggcagtgaat
    13201 gtgccgatta tcggcattgt aaaacgtgat ttgccagatt cccctgtgcg tattacgcca
    13261 tttttagaag atattgatgc cttagccgaa gccggtgccg atattattgc ggtggacggc
    13321 acattccgca cccgcccggt cagcattgaa gaggcggtaa aacgcattca cgaaaaaggt
    13381 tgcttggcaa tggcggattg ctccaccctt gaagaaggtt tacattgcca acaattaggc
    13441 tttgatattg tgggtagtac aatgtctggc tacaccggtg gcgaaatgcc tgatgagccg
    13501 gactatcaat tagtgaaaga tttaaaagct gccggctgta atgttatggc ggaaggtcgc
    13561 tacaacacgc ctgaactggc aaaaacggcg attgaaatcg gggcggatta cgttaccgtt
    13621 ggatcggcat tgacccgctt agagcatatt gtgagctggt ttgccgactc tgtaaaatcg
    13681 gctcaaaaat aggagctgct tatgcgttgt ttagcaatag acatcggtgg cacgaaaatt
    13741 gccacggcaa ttgtgcaaca caatcaagtg tcacaacgcc aacaaattca gaccccgact
    13801 gataaaccac aagctgatca ggcaggcagt ttgcatcaag cgattggtga gataatgcaa
    13861 cattatcaag ggcaatttga ttttgtggca gttgcctcaa caggcattat caataaaggg
    13921 gtgcttaccg cattaaatcc taaaaattta ggcggattgg cagaatttcc gttgaaacaa
    13981 agcattgaaa aacataccga taagccgatt gcattattaa atgacgtgca agcagcggtg
    14041 tgtgccgaat atttaaatga agaccaacaa gcggtcaaaa attttgtatt tattaccgtt
    14101 tccaccggcg taggcggcgg cattatttta aacggcgaac tgcaaatcgg cagtaacggc
    14161 attgcaggac atatcgggca tactctagcc gatccgaacg ggcctctctg tggttgtgga
    14221 cgagtcggct gtgtcgaagc agtcgcagca gggcgtgcaa tagaggcagt ttccagccaa
    14281 tgggaaaagc cttgttcacc gaaagaggtg ttcgagcgat tccgccaagg caacccacaa
    14341 gcggtcgaat tagtacaaaa atctgcaaaa gcgattgcta atttaattgc agatttaaaa
    14401 atcagtttag atatacaaaa agtggtgtta ggtggcagtg tgggcttagc ggaagggtat
    14461 ttaccgcagg tgtccaacta tttagctgaa atgccgagcg tatatcattg cgtattggaa
    14521 aatgctctat ccgggcaaga tgccggctta atcggtgcgg cttggtgggc ggaaaaccaa
    14581 cttaatcaag gttttactct ttaacaaatt ctaactccgg agatccaaat gaaaaactta
    14641 aaaggtattt ttagtgcgtt actcgtctct ttcaacgaag acggcaccat caacgaaaaa
    14701 ggcttacgcc aaattatccg ccacaacatc gacaaaatga aagtggacgg tttatatgtc
    14761 ggcggttcaa ccggtgaaaa ctttatgctt tctaccgaag agaaaaaaga aattttccgc
    14821 attgccaaag acgaagcgaa agatgaaatc gcccttatcg cccaagtcgg tagcgtaaac
    14881 ttaaaagagg cggtagaact gggtaaatat gccacagaat taggctacga cagcttatct
    14941 gcggtcacac cgttctacta caaattcagc ttcccggaaa tcaaaaattt ctacgaaacc
    15001 attattcgtg aaaccggcaa caaaatgatt gtttactcca ttccgttctt aaccggcgta
    15061 aacatcggtg tgagccaatt cgctgaatta tttgaaaacg aaaaaatcat cggtgtaaaa
    15121 ttcactgccg gcgatttcta cctgttagag cgtttacgca aagcgttccc gaaccactta
    15181 atctacgcag gtttcgatga aatgatgcta ccggcaacgg tattaggtgt ggacggtgca
    15241 atcggctcaa ccttcaacgt aaacggtatt cgtgcaagac aaatctttga attagcccaa
    15301 caaggcaaaa tcaaagaagc atttgaaatc caaaatgtaa ccaacgattt aatcgaaggc
    15361 attttaggca acggtttata ccaaaccatc aaaggcttat tggagttaga aggtgtgcaa
    15421 gcaggttact gccgtgagcc gatgacgaaa gaacaaactc cggcacaaaa agaagtgacc
    15481 aaacagttaa aagctaaatt cttgtaattt aagttgcaaa aggctaaacg aaaatcaccg
    15541 cttgtagtaa caagcggtga ttttttctca acgacttgca attaatgaag ccattctgct
    15601 ttttctacca cggtgtaacg tgtcaccatt atattttaat cgcacttttt cttggcgagt
    15661 attttctgat ttcaactctc tacctatatc ataaaaccct gtactccaga tattttgagt
    15721 aatatccgct tttacaataa tatcattgaa gccgttggtc tgtttgttat ccatttgcaa
    15781 taccaagttt gtgtttccgt tttggtttct ttatcatcta aaatagacca aaaagtcatc
    15841 gggtaatcaa aaacaagttt taacttttct ttttccggca caaataacat caaatgatca
    15901 tttgcagaat actcaggagc acttggacca cgagcagcat tattaaacct cacgccgaaa
    15961 gctcttactt tgtcgtttag aatataacgg gcggtatcaa ttttaagact atctgcattc
    16021 acatcgatag aggcatcgat ctccatatcc tgctcccacg attgcaatat cgcattatca
    16081 ttcacacgag caacaaaaag cgtccactta ggtgtgtttt cgtcgttttg ataattttct
    16141 ttgctgtatt taggctctat taccgcataa ctcactaagg tttccgttga attgttagga
    16201 gctgttttac aggcagaagc taaagtacga gcagaaagtt tctcttgaga aatcttaaag
    16261 taatgagcaa taatttgatg ttgttgctca gcacaaacct gtgtgttatt accttcatct
    16321 gcttgagttg caagcgtaag taaaagaact aagaggagta tctttttcat atagatttat
    16381 ccgtatagaa agataactca ttctatgggg tactgactct ttttgcatag agagaaagaa
    16441 aaaaatttgg tcggaaaaat aacggcgagc ctagcgaaaa caagggttcg ccgtaatttt
    16501 atgggggaag ctatgtaaaa aacaaaatga gcaggattag aaaaaaatga gcagtttttg
    16561 cgatattttt tgcataggtt tgatcggttt taaaactatt ttaaatctgt tttaaactaa
    16621 agagtgtccg atgtggacta cctgcccgat gatttggagg ttttgagctt cttcggcggt
    16681 aatctgtatt gggcggtagg actcgttatc gctaattaat tcaatatagt cccattcttt
    16741 tctaatccgt ttaacccata cgctttcccc attctgcaca agataaatct tatcatcacc
    16801 acgaggctct cgtttgctga aatctaccag catttggtca ctgtctgcaa tggtagggtg
    16861 cattgatgtt ccatttgccc aaaacacgcc gcagttgtgg gcttttacgc cgaggctttg
    16921 cagcaggctg tcggcgtaag gttcttgccc gtctggcttc gttacgccct cgttaaagct
    16981 gccaaagcct gctgaaacgt tgattgttct gaagctgtta atcattgaaa caatatcatc
    17041 agccattttt tctagtcgct caaactctct tgccacaata ctggtattct ctgattgtgg
    17101 tttgctttcc ttacctgttg ccagccattc aaggctcaca tttgacacct ctgctatttt
    17161 tacaagattt gaacgagatg gatctgcctc tccttttacc cacctagata gtgatgcttg
    17221 ggctaccccc actgctcttg caaactcact gtaattgtcc ttaaagctat tttttgcaat
    17281 ccatttcatt ctttctgaga agctctcatc gtaaatgttt ggtttactca tcttttacgt
    17341 ttccattaat aaagttttac tcgtaaaaca tactcataaa ccattgattt ttaagttatt
    17401 tatgaataaa gcaaaaatat tttagatgtt tttatgtttt acggttgatt tgtttaaagt
    17461 tttacggtta aatacacgca tcaaatagat aaaaagaggt gtatcgaatg agtgtattaa
    17521 acgatgttaa aaaaaccgca cagagagatt ggcataaagc cgatattctt gcggaacttc
    17581 gtaaaaaagg ttggtcactt cgttctttgg ctaaagcagg caatgttagc cataacacgc
    17641 tgaagtctgt tttagacaag ccttacccca aaatggaacg cttagttgca aatgccatag
    17701 gggttgcccc tgaagtgatt tgggctgggc gaacagcaga acgcattgaa cgtaatcggc
    17761 gaccaacttt aactaataag ttttaatcat aaatgatctt taacgtaaaa gatataggag
    17821 aagaacattt atgagcgaat taagtttaaa aacgcactat tcagtggctg aattgttaag
    17881 ttttaagtta tctagcctac caagtgctca taaaaatgtg cttgagaaag caataaggga
    17941 aaactggcaa tctcaaaaac gcaaaggcag aggcggcggg gttgaatatg aattaatcag
    18001 tttacccacc gaagtccaac aggaaatccg caccaagtta ctcaaacttc ttcctgctga
    18061 aatcagcaaa ggcgaattga gtgtagtgcg acaaaacatt gatttggagc agataaccga
    18121 taaacaactt tctacggcag atgctcgcat tatggtggtg cggtggttct tgatgcagga
    18181 agtgcagttg gggctaagcc gcacaaaaac gctagaccaa gtcattgcag cggtggcaag
    18241 cagtgaaatt cctgctgaaa tttgcaaagc gattatggcg ggcaatagta aagccggtgg
    18301 aaagttaaag ctatctaaac gcaccttgca tagttgggtg ctggcgtatg aggcaggcga
    18361 aaattcagcg gaacggttaa aacagatgat accgctgaaa acacaaaaac gtgccgtgcc
    18421 cgagcggtgt ggttggttgc aagcctttct gccgttttat caaaccttta gcaatgtggc
    18481 actcacacag gcttatgctc aatttgcaat gcagtatgag ggcgaagatt tacctacaga
    18541 gagccaagtt cggtatgcct tgaagcagtt gcccgattat gtggtgcaac aagggcgg
//
LOCUS       DANLZQ010000039        18241 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.039, whole genome shotgun sequence.
ACCESSION   DANLZQ010000039 DANLZQ010000000
VERSION     DANLZQ010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 18241)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18241)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18241
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.039"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(161..4147)
                     /gene="hrpA"
                     /locus_tag="PXE50_001236"
     CDS             complement(161..4147)
                     /gene="hrpA"
                     /locus_tag="PXE50_001236"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HDL5622159.1"
                     /translation="METPLQKNHKKPPLVKLENITTADFRRLLGRLKGAENIKNIDHK
                     RSVLAEISQDLTACQARFFARTQHAQNLKIDYPDLPVSARREEILKLISENQVVVIAG
                     ETGSGKTTQLPKMCLELGRGVKGLIGHTQPRRIAARSVATRIAEELKSELGETVGYKV
                     RFNDQVSENSLIKLMTDGILLAEIQHDSYLNQYDTLIIDEAHERSLNNDFILGYLKQI
                     LHKRPDLKVIITSATIDVERFSKHFNNAPIIEVSGRTFPVEVRYRPIVEDQDQLQGIL
                     NAVDELQAEGRGDILIFMNGEREIRDTAEALQKQELRHSEILPLYARLSAAEQQRIFQ
                     PSGGLNRIILATNVAETSLTIPNIKYVIDTGTARISRYSYRTKVQRLPIEPISQASAN
                     QRKGRCGRTSEGICIRLYSEEDFNSRPQFTDPEILRTNLAAVILQMTSLGLSDIANFP
                     FVDAPDSRQIQDGIRLLEELQAIIPNEKIPSTACGGGLGRGEIRSNDGTPPLPTSPRK
                     RGDGFRLTPIGRQLAQLPVDPRLGRMVIEAAKNGSLHEVMMIVSALSIQDPRERPQEK
                     QQSADDKHRRFADKESDFLAFVNLWHFIQAQQKELSKNQFRNLCRKDYLNYNRVREWQ
                     DIYHQLRLAVREMGLKINSEPASYQPIHTALLAGLLSHIGLKDNEKMHYLGARNAHFF
                     IFPNSALFKKQPKWVMAAELVETTKLWGRMVARIEPEWVEPLAVHLTKSSYSEPHWAK
                     SKGAVMASEKVSLYGIPIVAQRSVNYGSIDPTVSREIFIRSALVEGECHNNYKFFKEN
                     HRLIREVEALEHKSRRRDILVDEQVLFEFYDQRIGTEVVSSKHFDTWWKQASKKDPEL
                     LNFEKSFLINDNANLASELDFPNFWHQGDLKLKLSYQFEVGKDHDGVTVHIPLPLLNQ
                     VEPEGFDWQIPGLRHELIVSLIKSLPKSLRRNFVPAPNYADAFLGRAEPFKKPLLDNL
                     SHELRRMTGVLVEPEQWDLSQLPPHLRMTFRVIDDKGKKLQESENLDELKFALKDEVQ
                     NTLSNIADDGIEQSGVHIWNFAELPQFYEQKKAHFSVKAYPAIVDEQTAVGVKLFETE
                     FEQARAMQAGLRRLLLLNVPSPIKYLHEKLPNKAKLGLYFAPFGKVLELIDDCIACAV
                     DQLVEEFGGFVWTEEKFTQLHEFVRANLNDKTVEIAKQVEKCLTLAYELNKRLKGKLD
                     FTMAFALSDIKTQIEGLIYPDFVTKTGYARLADLYRYLTAIERRLDKLLVDSNTDRAK
                     MLRVEAVQEAYKQLLAKLPKSKAVPDEVLEIRYMIEELRVSLFAQQLGTKYPISDKRI
                     LNVINEIK"
     gene            complement(4251..4703)
                     /locus_tag="PXE50_001237"
     CDS             complement(4251..4703)
                     /locus_tag="PXE50_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HDL5622160.1"
                     /translation="MTLQFNAVALLLVVLIILGLISQNSAVTISAAVLLIMQQTLLSK
                     FIPFVDQYGLKIGIIILTIGVLSPLVSGRITLPELAQLLNWKMALSIIAGVLVAWLGG
                     RGVNLMGSQPVLVTGLLIGTVIGVAFLKGVPVGPLIAAGILSLIVGKT"
     gene            complement(4766..5035)
                     /locus_tag="PXE50_001238"
     CDS             complement(4766..5035)
                     /locus_tag="PXE50_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622161.1"
                     /translation="MDAAMSLRFDKLRFVKRLQEANQTPEMAEAFANALDEALEQSQS
                     PLATKADLQLELEKLKNEINTTIFKAITLNITILGFLMAIMKFIN"
     gene            complement(5133..5729)
                     /gene="grpE"
                     /locus_tag="PXE50_001239"
     CDS             complement(5133..5729)
                     /gene="grpE"
                     /locus_tag="PXE50_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005712850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HDL5622162.1"
                     /translation="MTTQNEHLQEEVKQEEIQPEVVTEETQAEEQNTPQEEPLALAQA
                     RIAELEAYIAEADKREQDIQLRAQAEIQNIRRRAEQDVEKAHKFALEKFSKELLTVVD
                     NLERGLDALDKAVTDETTQALVDGVEMTHKEFINTLAKFGVVAIGEVGEAFNPELHEA
                     ISMQPAEGIEANHVSTVLQKGYTLHGRVIRPAMVMVAN"
     gene            5951..7045
                     /locus_tag="PXE50_001240"
     CDS             5951..7045
                     /locus_tag="PXE50_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HDL5622163.1"
                     /translation="MKKLAGLFAAGLATVALTACNEEKAAEPKATAAEAKPQATNQTV
                     HLYTWTEYVPEGLLDEFTKETGIKVEVSSLESNETMYAKLKLQGKDGGYDVIAPSNYF
                     VSKMAKEGMLAELDHAQLPVIKELNQDWLNKPYDQGNKYSLPQLLGAPGIAFNTADYK
                     GETFTSWGDLWKPEFAGKVQLLDDAREVFNIALLKLGKNPNTTNPDEIKEAFEELKKL
                     RPNVLSFTSDNPANSFIAGEVSVGQLWNGSVRIAKKENAPVDMVFPKEGPVLWVDTLA
                     IPANAKNKENAHKLINYLLSAKVAEKLTLAIGYPTSNVEALKVLPKEITEDTAIYPSA
                     EVLQKSQWQDDVGDAIELYEKYYQELKAAK"
     gene            7181..8572
                     /locus_tag="PXE50_001241"
     CDS             7181..8572
                     /locus_tag="PXE50_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HDL5622164.1"
                     /translation="MNLRWQEYPENARKLFKLSLPIFISQLSASGMGLADIVMAGLVS
                     DDDVSAIAVSNSIYFPLFLFVSGLLNAITPTVSYLNGSSNRHLIANQVRQGYWIVFAM
                     SIPLMAIFLNSHLILDLMQTPAEFSIKSQQYLAVMAVGLIPALLAVSLRCMNDGLSNP
                     KPAMRITFFGLLLNIPLNYIFIFGKFGLPEMGAVGCGVATAIVNLIMFFMLLHYCYTN
                     SAQKDIRLFEKWIDAPSGQILLKLCKLGLPIAFAIFTEVMLFSTSSLFLSPLGSQVVA
                     SHQAALQTSSLFFMIPMSFGIATTIMIGQTLGQKNVEGAKILSYHALITATALAIIAA
                     IIIILLKNFIPFAFTNNPISIAITAHLLIFAAVYQIPDAIQAVANGILRGYKHTQPIL
                     YVTLFCYWGVSMPLGYILARTDWIVQPMAAQGFWLVFCIGLSLAGGLLLWQMRKIQAV
                     PKAQLIAKLERIK"
     gene            8631..12155
                     /gene="recB"
                     /locus_tag="PXE50_001242"
     CDS             8631..12155
                     /gene="recB"
                     /locus_tag="PXE50_001242"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HDL5622165.1"
                     /translation="MKNLNPIQLPLNKSVLIEASAGTGKTFTIANLYLRLLLGIGCNP
                     LTVEQILVVTFTKAATEELKNRIRKNIQQCADFLKDQADGLEVESTKSYRNNLDFLAQ
                     IYPLIPNIHEALLRLSIAEREIDTASVFTIHGFCQKMLVQFAFESGVRFDLDLQPNQS
                     DLLKKLSEEVWREQFYPQDLAITYAVAEQLGTPEYALNAVRRYLSTELPEPNASLNQD
                     IAEHLAQYQQFINEVKSYWKTHSDELVETIRHDLKHKITLHGGWYRATTFEAGVEVMN
                     QWANSQHNHFPAGLYLFTTEKIAAGTKKSCEPIDSPHLAKNQAFLTAYKERFENSLSA
                     MLQYQFLIALKAKLAEYKQSHPQRSFDDLLTMLNQALKNLHTGEALSQKIRAMYPFAM
                     IDEFQDTDLTQYEIFSQIFMAENAENGFIMIGDPKQSIYKFRGADIFTYLRAAKQADE
                     QFTLGKNWRSLPEVVQAVNNLFSFANDNSPFLYEDIGFHPVEADSQKGQLVSEQGHFV
                     GYITENSKLDDLAEMCAYQIHQQLEAMAQGKFGVEKNGEFQSFAAKDIAILVRKGSQA
                     KRIKKALAKRNIKSVYLAESASVFGSEIATELCWLLQAALNPYHYKALLSALGSTLWG
                     LTAAEIHRYKENEQLWDLKVNQFVEYSNIWKEQGVLPMLHKIYLEQGIIERLKGLENA
                     DRLITDLLHLTEILQETSQALESEAELLRWYEKQVNSPDFNDEQQLRLESEEELIKIV
                     TIHGSKGLQYPIVWLPFVSQKSEGDTQTALSLYRNSQGALDWCLGSEEASFSLQYEAY
                     AEDLRLLYVALTRAESQLNLVLPKEISGWSPLHYLLADGEIPTGKVPVSDYFSQKRIA
                     ANLVEVAGELPFSLWEGEQSSDDYQAKTFSGNIRVVGQITSFTSLYAQHERFSEGKSE
                     RVMDLAQDRDVHIETIEAGYSSETAAFSPFQFPHGIKVGTVLHHFFEHCQFNEQIDRE
                     AVAKVCEQLGLSEEWIEPTALWFERILTTPLAEANFCLKAIDETKRLNEWQFYLRLKN
                     DKALHQLNALLKQHSPLAKTLPELQLPQLEGFVRGFVDCIVQVEEKFYLIDYKSNFLG
                     YLPQNYAKEHIQREMGRQRYDLQYLLYTLALHRYLTARLGEKYDYERDFGGVAYLFLR
                     AMNGENDNGVYFDKPTKQLIEEMDRLFG"
     gene            complement(12197..12679)
                     /gene="greB"
                     /locus_tag="PXE50_001243"
     CDS             complement(12197..12679)
                     /gene="greB"
                     /locus_tag="PXE50_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HDL5622166.1"
                     /translation="MAKSNYITRSGWQALDQELKFLWREERPKVTQAVSDAAALGDRS
                     ENAEYIYGKRRLREIDRRVRFLSKRLEVLQIVDYHPKQEGKVFFGAWVELENEEGEAK
                     QYRIVGCDEFDPAKNWISIDSPVARALIGKQVDDEIRVETPLGKVLLYINKIWYEQAS
                     "
     gene            complement(12730..14010)
                     /gene="pepB"
                     /locus_tag="PXE50_001244"
     CDS             complement(12730..14010)
                     /gene="pepB"
                     /locus_tag="PXE50_001244"
                     /EC_number="3.4.11.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase PepB"
                     /protein_id="HDL5622167.1"
                     /translation="MTAMKISLSTQNAPEIWGKNAILSANDAGFTVHNPNNDLATIQK
                     AARKIKNQGISTVELTGDSWDLESCWAFHQGFHSVKNQGSVQYPDLDEQQAEFDNRVK
                     CATFVRELINKPSDKLTPEKLAEQAVEFIQKMAKPNTVSYQIIRGEALQEQGYHGIWT
                     VGKGSANPPAFLVLDFNPTNDENAQVLACLVGKGITFDTGGYSLKPSDSMSTMRTDMG
                     GAALLTGSLAFAIARGLNKRVKLYLCCAENMVSHNAFKLGDIITYRNGVTVEVLNTDA
                     EGRLVLADGLIDACKQNPQFIIDAATLTGAAKVAVGNDYHSVLSMDDNLTEALFKSAK
                     TENEPFWRLPFEEFHRGQIASSFADIANIGSVPVGAGASTATAFLSYFVENYQQNWLH
                     IDASATFRKTASDLWAAGATGLGIRTVANLLLSK"
     gene            complement(14149..14970)
                     /locus_tag="PXE50_001245"
     CDS             complement(14149..14970)
                     /locus_tag="PXE50_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010869033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase, lipoprotein e(P4) family"
                     /protein_id="HDL5622168.1"
                     /translation="MKNIKLSAMSLTALFVLTACSHTHKNSDEHHQMVLQEQATLGIN
                     WMQQSGEYQALAHQAFNAAKVAFDQAKVKKGKKKAVVVDLDETMVDNSLYAGWQVKNH
                     KPFDGESWTRWVNARQTGAIAGAVEFNNYVNSHKGTMFYVSNRKDSSEKAGTIDDMNK
                     LGFSGVSEQTLLLKKDKSNKTPRFEEIEKQGYEIVLYIGDNLNDFGDATYRKSNAERR
                     AFVAENSQQFGKKFIMLPNPNYGDWEGGLDKDYYKGNAESRVKIRHNAIKAWDGK"
     gene            15118..16061
                     /locus_tag="PXE50_001246"
                     /pseudo
     CDS             15118..16061
                     /locus_tag="PXE50_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251085.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
     gene            complement(16174..17337)
                     /locus_tag="PXE50_001247"
     CDS             complement(16174..17337)
                     /locus_tag="PXE50_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDL5622169.1"
                     /translation="MKRKTLATLVLIAALGIGGYFYYQQQTNKPQIHYITQAVTRAEI
                     NKNVLATGSVRANKRTEVGAQVSGKIQKLYVELGQSVKQGDLIADIDSSNQSNTLSTA
                     QARLSSYKAQLTSAQVALEVAQSNYNRLNKLYRANSASLNDLETAKNTLASAKATVDN
                     IKAQLKSAEISVNDAKTNLTYTQIISPMDGVIVSVPVSVGQTVNSNQTSPTIVQVADL
                     SKMLIKLEISEGDIAQVKVGQKVKFSTLAEPNREYSATIDSVDPALTTLTDNNYTEQS
                     GNTEAVYYYANVSVDNADNSLRIGMTTQAQITIDKREQVLVVPTSVIKKRGKENYVLV
                     LENEQSVERKIQIGISDTQNTEVLAGLNEGDQVIVTQRADDEKISTARGPRMF"
     gene            complement(17403..18218)
                     /locus_tag="PXE50_001248"
     CDS             complement(17403..18218)
                     /locus_tag="PXE50_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HDL5622170.1"
                     /translation="MTLPFRAIISDLDGTLLNANHKIGDFTIDTLEQLSKKGVDIFFA
                     TGRNHPDVSQIIGKVNVKNAMLVTSNGARANNLEGKKILNHYLPEDLAFELMNIEFDD
                     QNVCLNSYQGDEWFINKEIAELKKFHQDSGFSYQVVNFAHHHGRNTEKVFFIGKTAEA
                     LVPIEHYIRDTYGDRVQMTYSALLCLEVMAKGVCKANALAELVKLRGYTLADCIAFGD
                     GMNDVEMLSLAGKGCLMGNADPRLKAVLPNNEVIGFNKDEAVASYLRATFGIV"
BASE COUNT         4938 a         3809 c         3957 g         5537 t
ORIGIN      
        1 ttctgatata tttagttttc taatttttat cttgagattt ttttaatcaa aaaaatgtag
       61 caggtttgct tctgaagcga gaggaatagg tattcgagaa aacaagcggt cagagttgca
      121 aaatttttta cttatctgac cgcttgttgt atagggaata ttactttatt tcattgatca
      181 cattcaaaat ccgcttatcc gaaatcgggt attttgtgcc gagctgttga gcgaacagac
      241 tgacccgcag ttcttcgatc atatatcgaa tttccagtac ctcgtccggc accgctttgg
      301 attttggcag tttggcaagg agctgtttat atgcctcttg cactgcttcc acccgtagca
      361 ttttggctcg gtcggtgttg ctgtccacca acagtttatc caaacggcgt tcgatagcgg
      421 tcaaataacg gtataaatct gcaaggcggg cgtagccggt tttggtgaca aagtcggggt
      481 aaatcagccc ttcgatttgg gttttgatgt cgcttaacgc aaacgccatc gtaaaatcga
      541 gcttgccttt taaccgcttg tttagctcgt aggccagtgt gaggcacttt tcaacctgtt
      601 tggcaatttc tacggtttta tcgtttaaat ttgcccgcac aaattcgtgc agttgggtga
      661 atttttcctc cgtccagaca aacccgccga actcttctac cagctgatct accgcacagg
      721 caatgcagtc gtcaatcagc tccaatactt tgccgaacgg ggcaaaatat aagcccagct
      781 tggctttgtt cggcagtttt tcgtgtagat atttaatcgg cgatggcaca tttagcaaca
      841 gcagacggcg aagtcctgcc tgcattgcac gagcctgctc aaattccgtt tcaaacagtt
      901 tcacccccac agccgtttgt tcatcgacaa tcgcagggta ggctttcacg ctgaaatggg
      961 cttttttctg ctcatagaac tgtggcaatt cggcaaaatt ccaaatatgc acaccacttt
     1021 gctcaatgcc gtcatcggca atgttggaaa gggtgttctg cacctcatct ttcaaggcaa
     1081 atttcagctc atcaaggttt tcgctctctt gcagtttctt gcctttatca tcaatcacac
     1141 ggaaagtcat ccgcaaatgt ggcggcagtt ggcttaaatc ccactgttca ggctcgacca
     1201 atacacccgt cattcggcgt agttcgtggc ttagattgtc cagcaacggt tttttaaacg
     1261 gctcggctcg ccctaaaaag gcgtccgcat aattcggcgc cggcacaaaa tttcgccgta
     1321 gcgatttcgg taaagattta atcagcgaga cgatcagctc gtggcgtagc cccggaattt
     1381 gccaatcgaa accttcgggt tccacttggt taagcagcgg tagcggaata tgcaccgtca
     1441 cgccatcgtg atcttttccg acctcaaact gatagctcag tttgagtttt aaatcgcctt
     1501 gatgccagaa attcgggaaa tccagctcgc tggcaaggtt ggcgttgtcg ttgatcagga
     1561 acgatttttc aaagttcagc agttcaggat cttttttgct tgcctgtttc caccaagtat
     1621 caaaatgctt gctcgacaca acttcggtgc caatccgctg atcgtaaaac tcaaacagca
     1681 cctgctcgtc caccaaaata tcacggcggc gggatttgtg ttccaatgcc tcaacttcac
     1741 ggatcaagcg gtgattttct ttgaaaaatt tgtaattgtt gtgacattcg ccttccacca
     1801 acgccgagcg gataaaaatc tcacggctga cggttgggtc tatcgagcca taattcaccg
     1861 agcgttgtgc cacaatcgga atgccgtaga gcgacacttt ttccgatgcc attaccgctc
     1921 cttttgactt cgcccagtgt ggttcgctgt aactggattt agtgaggtgt actgccaacg
     1981 gttccaccca ttccggctca atgcgagcga ccattcgtcc ccaaagtttg gtagtttcca
     2041 ccagctctgc ggccattacc catttcggct gttttttgaa aagtgccgag ttcgggaaaa
     2101 tgaaaaagtg ggcatttctt gctcctaaat agtgcatttt ttcattatct ttcaagccga
     2161 tatgcgacaa caagccggcg agcagggcgg tgtgaatcgg ctgataactt gccggctcac
     2221 tgttaatttt taagcccatt tctctaactg caaggcggag ttggtggtag atatcctgcc
     2281 actcccgcac acggttgtag ttcaaataat ccttacggca gagattacgg aactggtttt
     2341 tcgacagttc tttttgttgg gcttggataa agtgccacaa attcacaaag gctaagaaat
     2401 cgctctcttt atcggcaaaa cggcggtgtt tatcgtctgc cgactgctgt ttttcctgcg
     2461 gacgctcacg agggtcttgg attgagagag ctgacacaat catcatcact tcgtgcaacg
     2521 aaccgttttt cgccgcctcg atcaccattc tgcctaagcg aggatcgact ggcagttggg
     2581 cgagttggcg accgattggg gttaatctaa acccatcccc ccgtttacgg ggggaggttg
     2641 ggaggggggg agtgccatca ttagaacgga tttcccccct ccctagccct cccccgcaag
     2701 cggtggaggg gattttttca tttggaataa tcgcctgtaa ttcttccaac aaccgaatcc
     2761 cgtcctgaat ttgtcggctg tcaggggcat caacaaacgg gaaattggca atatcactca
     2821 atccaagcga agtcatttgt aaaataaccg ctgcaaggtt agttcgtaga atttcaggat
     2881 cggtaaattg tggacggctg ttgaaatcct cttctgaata gaggcggata cagatccctt
     2941 ccgaggttcg cccacaacgc cctttccgct ggttggcgga ggcttgcgaa atcggctcaa
     3001 tcggcaagcg ttgcactttg gtgcggtagc tataacgaga aatacgagcc gtgccggtgt
     3061 cgatcacata tttaatattc ggaatagtga gggaggtttc tgccacgttg gtcgccagaa
     3121 taattcggtt tagcccaccg cttggctgga aaatccgttg ttgttcggca gccgataagc
     3181 gggcgtaaag gggtaaaatt tcgctatgtc gcagttcctg cttttgcaag gcttcggcag
     3241 tgtcacgaat ttcccgttca ccgttcataa aaatcagaat atcgccacgc ccttcggctt
     3301 gcagttcgtc caccgcattt agaatacctt gcagttgatc ttgatcttcc actatcgggc
     3361 gataacgcac ttccaccggg aatgtccgac cagagacttc aataatcggg gcgttgttga
     3421 aatgtttgga aaaacgttct acatcaatag ttgccgaggt gatgatcact ttcagatcgg
     3481 ggcgtttgtg cagaatttgt ttcagataac ccaaaataaa atcgttgttc agcgaacgct
     3541 cgtgagcttc gtcaataatc agcgtatcgt actgatttaa atagctgtcg tgctggattt
     3601 ccgccagcag aataccgtcc gtcattagct tgattaagct gttttcactg acttgatcgt
     3661 taaagcggac tttgtaaccg accgtctcgc ccagttccga tttcagctct tcggcaatgc
     3721 gagtcgccac cgaacgtgcg gcaattcggc ggggctgggt atgcccaatc aagcccttca
     3781 ccccacgccc gagttctaag cacattttcg gtaactgggt ggttttgccc gaaccggttt
     3841 cccctgcgat caccaccacc tgattttcgc taatcagttt taaaatttcc tcacggcgag
     3901 cggaaacagg cagatcaggg tagtcaattt tcaggttttg ggcgtgctga gttcgtgcga
     3961 aaaaacgtgc ctgacaagcg gtgagatctt gcgaaatttc tgccaaaact gaccgcttgt
     4021 gatcgatgtt tttaatattt tccgcccctt ttaagcgacc gagcaggcgg cggaaatcgg
     4081 cggtggtgat attttccagc ttcacaagcg gtggtttctt atgatttttt tgcaaaggtg
     4141 tttccattta atttctcttt tgcattaaga ccttgtgatt tattgtaggg tgggcgtaag
     4201 cccacgtaac agaataggga ttttatgcgt ggacttacgt ccaccctaca ttaggtttta
     4261 ccaacaatca gtgacaaaat ccctgccgca atcaacggcc cgaccggtac gccttttaag
     4321 aacgccacgc cgatcaccgt gccgattaaa agcccagtta ccaacaccgg ctggctgccc
     4381 attaaattca cgcccctgcc acctagccac gctaccagca cgccagcaat tattgagagt
     4441 gccattttcc agttcaatag ttgggcaagt tcgggaagcg taattcgccc tgaaaccaag
     4501 gggctaagta cgccgatggt taaaatgata atcccgattt ttaagccgta ttgatcgaca
     4561 aaggggataa atttagaaag taaggtttgt tgcataatca gcaatacggc ggctgaaata
     4621 gtaaccgcac tgttttggct gatcagccct aaaataatca gcaccacaag tagaagtgcc
     4681 actgcgttaa attgtaaagt cataggatta aaacgtaaaa acccttactt catagaagta
     4741 agggagtggt taattaaacg ttgagctagt taataaattt cattattgcc attaaaaagc
     4801 caagaattgt gatatttaag gtaattgctt taaatatcgt ggtattgatt tcatttttta
     4861 gcttttcaag ttcaagttgc aaatcagctt ttgttgctag tgggctttga ctttgctcta
     4921 aggcttcatc gagagcatta gcaaatgcct cagccatttc aggtgtttga ttggcttctt
     4981 gcaagcgttt tacaaaacgt aatttgtcaa atcgtaggct catagctgca tccatttcaa
     5041 ttatcctctt gtggttaagt tataaactaa tttagcataa tcacaagcag gaattttagg
     5101 agattttgtg atcttcgtcg aaaatcgaca atttagtttg ccaccatcac cattgccggg
     5161 cgaatcactc gtccgtgaag cgtgtagcct ttttgtagca ctgtgctgac atggttggct
     5221 tcaattcctt cggcaggttg cattgaaata gcttcgtgca attcagggtt aaatgcctcg
     5281 cctacttcgc caattgccac cacaccaaat ttagccagtg tattgatgaa ttctttatga
     5341 gtcatttcaa cgccgtcaac taacgcttga gtggtttcat cggtcacggc tttatcaagg
     5401 gcatctaatc cacgttcaag gttatcaacc actgttaaca attctttgga gaatttttct
     5461 aaagcgaatt tgtgagcttt ttcaacatct tgctctgcac ggcggcggat attttgaatt
     5521 tctgcttgag ccctaagctg aatatcttgc tcacgtttgt cggcttctgc aatataggct
     5581 tctaactcgg caattcgagc ttgagcgaga gctaacggtt cttcttgagg tgtattttgt
     5641 tcttccgctt gagtttcttc agttacaact tcaggttgaa tttcttcttg ttttacttct
     5701 tcttgtaagt gttcattttg agtggtcatt ttttatcctt taaaagacta atctggaaat
     5761 gtaaatcttc cttaatatag cgataaatta agggatttca agcatatctc tttctttttg
     5821 cgaaaataat tcacttttta atcagaaaag gcttgcaaaa tacggggggg ggcttaaaat
     5881 gccctagtct tttccgccct taggcaaggc tatatttttt aatcactttt ctttaacgga
     5941 gaaaacttaa atgaaaaaat tagcgggttt atttgcagca ggtttagcaa cagttgcatt
     6001 aacagcgtgt aatgaagaaa aagcggcaga gccaaaagca actgcggctg aagcaaaacc
     6061 tcaagcaaca aatcaaacag ttcaccttta tacttggact gaatatgtgc ctgaaggttt
     6121 gttagatgaa tttacgaaag aaaccggcat taaagttgaa gtttcaagtc ttgaatctaa
     6181 cgaaacaatg tacgctaaat taaaattaca aggcaaagat ggcggttatg atgtaattgc
     6241 tccatcaaac tactttgtat ctaaaatggc gaaagaagga atgttagcgg aattagatca
     6301 cgcacaactt ccggttatta aagaattaaa ccaagattgg ttaaataaac cttacgatca
     6361 aggaaacaaa tattcattac ctcaattatt aggtgcgccg ggtattgcat ttaatacggc
     6421 agattacaaa ggtgaaacat tcacttcttg gggtgatttg tggaaacctg aatttgcagg
     6481 taaagtacaa ttattagatg atgctcgtga agtattcaac attgcgttat taaaattagg
     6541 taaaaaccca aatacaacta atccggatga aatcaaagaa gcctttgaag agttgaaaaa
     6601 attacgtcca aatgtgcttt catttacctc tgataacccg gcaaactcat ttattgctgg
     6661 tgaggtttct gtaggtcagt tatggaacgg ttctgtacgt attgcgaaga aagaaaacgc
     6721 accggttgat atggtattcc cgaaagaagg tcctgtgctt tgggtcgata ctttagccat
     6781 tccggcaaat gcgaaaaaca aagaaaatgc acataaatta atcaactact tattaagtgc
     6841 aaaagtagct gaaaaattaa cgttagcgat tggttaccca acttcaaacg tagaagcatt
     6901 aaaagtatta ccgaaagaaa ttactgaaga tacagcaatt tacccatctg cagaggtttt
     6961 acaaaaatct caatggcaag atgatgttgg tgatgcaatt gagctttacg aaaaatacta
     7021 ccaagagtta aaagcagcaa aataatagct gattaattct gaagcctcta gggagcaatc
     7081 tttagaggct ttctcttttg agttgcaaaa aatttggcaa aaacgaccgc tttctaaggt
     7141 acaatcataa aaacatactt agattttgag agattaaacc atgaacttaa gatggcaaga
     7201 atatcctgaa aatgcccgca aattatttaa actatcccta cccattttta tttctcagct
     7261 ttcagcttcc ggaatggggc tggcggatat tgtaatggct ggcttggtga gtgatgatga
     7321 tgtctcggcg attgcggtaa gtaattcgat ttactttccg ctctttctgt ttgtgtcagg
     7381 gttgctgaat gcaattaccc caaccgtttc ttacttaaac ggctcgagca atcgccattt
     7441 aattgctaac caagtaaggc agggctattg gattgtgttt gcaatgtcta ttccattaat
     7501 ggcaattttc ctaaacagcc atctgatttt agacttaatg caaacaccgg ctgagttttc
     7561 aatcaaatcg caacaatatt tagcagtaat ggcagttggg cttattcctg ctttgctggc
     7621 ggtgagttta cgttgtatga acgatggatt atctaaccct aaacctgcga tgcggattac
     7681 ctttttcggt ttattgctga acattccgct aaactatatt ttcattttcg gcaaatttgg
     7741 cttgcctgaa atgggagcgg taggctgtgg tgtagcaacc gcaattgtga acttgattat
     7801 gttttttatg ttgttgcatt attgctacac caattctgcc caaaaagata ttcgtttgtt
     7861 tgagaaatgg attgatgctc caagcggtca aattttgcta aaactttgca aattagggct
     7921 gccgattgcc tttgcgattt ttaccgaagt gatgctgttt tcgacctcat cgctgtttct
     7981 gtcaccactt ggttcacagg tggtggctag ccaccaagct gcattgcaaa ccagctcgct
     8041 attttttatg attccgatgt cgtttggcat tgcaaccacc attatgatcg gacaaacact
     8101 tgggcagaaa aatgtggagg gggcgaaaat cttaagttac cacgcactga ttaccgcaac
     8161 cgctttagct attattgccg ccatcattat tattttgttg aaaaatttta tcccttttgc
     8221 gtttaccaac aacccgattt cgattgcgat taccgctcat ttattgattt ttgcggcggt
     8281 ttatcaaata ccggatgcca ttcaagcggt agcaaacggc attctgcgtg gttataaaca
     8341 tacccaaccg attttatacg ttactctgtt ttgttattgg ggggtgagta tgccgctggg
     8401 ctacattttg gcaagaaccg attggattgt acaaccaatg gctgctcaag gtttttggtt
     8461 agtcttttgt atcggcttaa gtttggctgg tggcttgtta ttatggcaaa tgcgaaaaat
     8521 acaagcggtg ccaaaagcac aattaattgc aaaattagaa cggattaaat aacagattct
     8581 ctgctatgga acatagcagt gctttttact tttagaagat aactttgctg atgaaaaacc
     8641 taaatcctat ccaactacct ttgaataaat ccgttttaat cgaagcgtcg gcaggtacag
     8701 ggaaaacctt taccattgcc aacctgtatt tgcgtttatt gctcggcatt ggttgcaacc
     8761 cgttaacggt ggaacaaatt ttggtggtga catttaccaa agcagcaacc gaagagttga
     8821 aaaaccgtat ccgtaaaaat attcagcaat gtgccgactt tttaaaagat caagctgatg
     8881 gtttggaagt ggaaagtaca aaatcctatc gaaacaacct tgattttttg gcacagattt
     8941 atccgctcat tccgaatatt cacgaagcat tgttacgttt aagtattgcc gaacgggaaa
     9001 ttgataccgc cagcgtgttt accattcacg gcttttgtca aaaaatgctg gttcagtttg
     9061 cgtttgagtc gggcgtgcgg tttgacttgg atttacagcc aaaccaaagt gatctactta
     9121 aaaaattaag tgaagaagtc tggcgagagc aattctatcc gcaagattta gccatcactt
     9181 atgcggttgc cgaacaactt ggtacgccgg aatatgccct caatgcggta aggcgttatt
     9241 tatctactga attacctgaa ccaaatgcct ctttaaatca agatattgcc gagcatttgg
     9301 ctcaatatca gcagtttatt aatgaggtga aatcctattg gaaaacgcat tcagatgaac
     9361 tggttgaaac tatccgccac gatttaaagc ataaaattac gctgcacgga ggttggtatc
     9421 gagcgaccac ttttgaagcc ggtgtggaag tgatgaacca gtgggctaat tcgcaacata
     9481 accatttccc ggcagggctt tatttattca ctacagagaa aattgcggct ggcacgaaaa
     9541 agagctgtga gccgatagat tcccctcatc ttgcaaaaaa tcaggctttt ttgaccgctt
     9601 acaaggaacg ttttgaaaac agcttgtcag caatgttgca gtatcaattt ttaattgctc
     9661 tcaaagcaaa attggcagag tacaaacaat cgcacccaca acgcagtttt gatgatttac
     9721 tcacaatgct aaaccaagcg ttgaaaaatc tacacacggg cgaagccttg tctcagaaaa
     9781 ttcgggcgat gtatcctttt gcgatgatcg atgagttcca agataccgat ttaacccaat
     9841 atgaaatttt cagccaaatt tttatggcag agaatgcaga gaacggcttt attatgattg
     9901 gcgacccgaa acagtcgatc tataaattcc gtggggcgga tattttcacg tatttgcgag
     9961 cagcaaagca ggctgatgaa caattcacat tgggcaaaaa ctggcgttcg ttgcctgaag
    10021 tggtgcaagc ggtcaataat ttgttttctt ttgcaaatga taactctccg tttctttatg
    10081 aggatattgg ctttcaccca gtggaggctg atagccaaaa aggtcagtta gttagtgagc
    10141 aagggcattt tgtaggctac atcacggaaa acagtaaatt agatgatttg gctgaaatgt
    10201 gtgcttatca aattcatcaa cagcttgagg cgatggctca aggcaaattc ggagttgaaa
    10261 aaaacggcga atttcaatcc tttgctgcaa aagatattgc gattttagtc cgaaaaggtt
    10321 cacaagctaa gcgaatcaaa aaggcgttgg caaaacgtaa tatcaaatcc gtctatttag
    10381 ctgaatcagc ttctgtattt ggttcggaaa ttgcaacaga attgtgttgg ttattgcaag
    10441 ccgcactgaa tccgtatcat tacaaggcat tattatcggc gttaggctca accttgtggg
    10501 gcttaacggc ggcagagatc caccgctata aggaaaatga gcaactttgg gatctgaaag
    10561 tcaatcagtt tgtggaatac agcaacattt ggaaagagca gggcgttctg ccgatgttgc
    10621 ataaaatcta cttggagcag ggcattatcg aacgtttgaa aggtttggaa aatgcggatc
    10681 gcttgattac ggatttattg catttaaccg aaattttgca ggaaacctcg caagcgttag
    10741 agtctgaagc tgaactgttg cggtggtatg aaaagcaagt taattcgccc gattttaatg
    10801 acgagcaaca acttcggttg gaaagtgaag aggagctaat caaaattgtg acgattcacg
    10861 gctcgaaagg cttgcaatat ccaattgttt ggttaccttt tgtttcacaa aaaagtgagg
    10921 gagacacgca gacagcatta agtttatatc gcaattctca aggtgcgctg gattggtgtt
    10981 taggctcaga agaggcaagt ttttcgctac agtatgaggc ttatgcggaa gatttacgtt
    11041 tgctgtatgt ggcattaacc cgcgcggaat ctcagcttaa cttagtgttg ccgaaagaga
    11101 tttccggctg gtctccactc cattacttgt tagcagacgg ggaaatacct acaggaaaag
    11161 tgcctgtttc agattatttt agccaaaaac ggattgctgc taatttggtt gaagtagccg
    11221 gggaattacc tttctcactg tgggaaggag aacaatcttc agacgattac caagcaaaaa
    11281 cctttagtgg caatatccgt gtggttggtc aaattaccag ctttacttca ctttatgccc
    11341 aacacgagcg ttttagtgaa gggaaatcag aaagggtaat ggatttagcc caagatcgag
    11401 atgtacatat agaaaccatt gaggcaggtt attcaagtga aactgccgct ttctcgccat
    11461 tccaattccc acacggtatt aaagtgggca cggtgttaca tcactttttt gagcattgcc
    11521 aatttaacga acaaattgat agagaggctg ttgctaaagt atgcgagcaa ttagggctaa
    11581 gcgaggaatg gattgaacca acagcattat ggtttgagcg tattctaact acccctttgg
    11641 cagaggcaaa tttctgctta aaagcgattg atgaaaccaa acgattaaac gagtggcaat
    11701 tctatttacg cttaaaaaat gataaagcct tacatcaatt aaatgcgtta ttaaagcaac
    11761 atagcccttt agcaaaaact ttacctgaat tgcaattacc gcaattagaa ggttttgtgc
    11821 gaggctttgt agattgtatc gtgcaagtgg aggagaaatt ctacttaatt gattacaaat
    11881 cgaatttctt aggctatctg ccacaaaatt atgcgaaaga acacattcaa cgggaaatgg
    11941 gcagacaacg ctatgatttg caatatctgc tttacactct cgccttacac cgttatctaa
    12001 ctgcccgttt aggtgaaaaa tacgattatg aacgagactt cggcggagtg gcttacttgt
    12061 tcttaagggc aatgaacggc gaaaatgata acggcgttta ttttgacaag ccgactaagc
    12121 agttgattga agaaatggat cggttgtttg ggtaaatatg tgtaggggcg aaaatttttc
    12181 gcccctttat gggtaattaa ctcgcttgct cataccaaat cttattgata taaagcaaca
    12241 ctttaccaag cggagtttct accctaattt catcatcaac ctgtttgccg attaaggctc
    12301 gggcgacagg ggagtcaatc gaaatccagt tttttgctgg gtcgaactca tcgcaaccaa
    12361 caatacggta ctgttttgcc tcgccctctt cattttctaa ttccacccaa gcgccgaaaa
    12421 agactttgcc ttcttgttta gggtgataat caacaatttg tagcacctct agccgcttag
    12481 ataaaaaacg cacacggcgg tcgatttctc tcaaacggcg tttgccgtaa atatattcgg
    12541 cattttcgct tcgatcaccc aatgcggcag catcagacac cgcttgagtc actttcgggc
    12601 gttcttcccg ccatagaaat tttaattcct gatctaaggc ttgccagcct gaacgggtaa
    12661 tgtaatttga tttagccata gttatttaat tgtttatgga gcaaatagtg atttgcccct
    12721 acgaagtttc tattttgaaa gcaataaatt cgctactgtt cttattccca gtccggttgc
    12781 tcctgccgcc cataaatcgc tcgccgtttt gcggaatgtg gcagaggcgt caatatgtag
    12841 ccagttttgc tggtagtttt ctacaaagta agataaaaat gcggtggcgg tacttgcccc
    12901 agcccccacc ggcacagagc cgatattggc gatgtctgca aaggaagaag caatttgccc
    12961 acggtgaaat tcttcaaacg gtaaacgcca gaacggttca ttttccgttt tggcagactt
    13021 aaatagtgct tcggttaggt tgtcgtccat tgaaagcacc gagtggtagt cattgccgac
    13081 tgcgactttt gctgctcctg tgagggttgc agcatcaata ataaattgtg gattttgctt
    13141 gcacgcatca attaaaccat cggcaagcac taaacgccct tcagcatcgg tgtttaaaac
    13201 ttcaacagtt acgccattgc ggtaagtgat aatatcgcct aatttgaacg cattgtggct
    13261 gaccatattt tccgcacagc agaggtagag tttcactcgt ttattcaagc ctcgagcaat
    13321 ggcaaaagca agtgagccgg ttaaaagtgc cgctccgccc atatcggttc gcattgtgct
    13381 catactatcg cttggtttta gactataacc gccggtgtca aaggtaatgc ctttgccgac
    13441 caagcaagcc agtacctgtg cgttttcatc gttggttggg ttgaagtcta atactaagaa
    13501 tgcaggcgga ttggcagagc cttttccaac tgtccaaatg ccgtgatagc cttgttcttg
    13561 taatgcttcg ccacgaatga tctggtaaga aaccgtattc ggttttgcca ttttttggat
    13621 aaactcgacc gcttgttcgg ctaatttttc aggggttaat ttatctgatg gcttattaat
    13681 taattcacgc acgaaagtgg cacattttac acggttatca aattcggctt gctgttcgtc
    13741 taagtctggg tattgtaccg agccttgatt ttttaccgaa tgaaatcctt gatgaaacgc
    13801 ccagcaggat tctaaatccc aactatcgcc ggtcagctcc acggttgaaa taccttgatt
    13861 tttaattttg cgggcggctt tttgaatagt ggctaaatcg ttgttcggat tatgtacggt
    13921 aaaccccgca tcatttgcgg aaagaatagc atttttaccc caaatttcag gggcgttttg
    13981 agtagaaagt gaaattttca ttgctgtcat tatcggtttc cttagaaaat ggattttgct
    14041 ttatcctaac aaacttttgc aaagttttat acaaaaatga ccgcttgcag agcatagcct
    14101 tgacaagcgg tcattgtttc gtgtttttac aacctgatta aggacggatt atttgccgtc
    14161 ccaagcttta attgcattgt ggcggatttt aacacggctt tcagcattgc ctttgtagta
    14221 atctttatct aaaccgcctt cccagtcgcc atagttcggg ttcggtaaca taatgaattt
    14281 tttaccgaat tgttggctgt tttcggctac gaatgcacgg cgttccgcgt ttgatttacg
    14341 gtaagtcgca tcgccgaaat cgtttaagtt gtcgccaata tagagcacga tttcatagcc
    14401 ttgtttttcg atttcttcaa agcgaggggt tttgttcgat ttgtcttttt tcaacaagag
    14461 tgtttgttcg ctcacaccac taaagcctaa tttgttcata tcatcaatag taccggcttt
    14521 ttcactgctg tctttacggt ttgaaacata gaacatagtt cctttgtggc tattaacgta
    14581 gttgttaaat tccactgcac cggcaatcgc tccggtttgg cgggcattta cccaacgagt
    14641 ccagctttca ccatcaaacg gcttgtggtt tttaacctgc cagccggcat aaaggctgtt
    14701 gtccaccata gtttcatcta aatctactac cacggctttt ttcttgcctt ttttcacttt
    14761 ggcttggtcg aatgccactt tcgctgcatt gaatgcttga tgggcaagag cttggtattc
    14821 gccggattgt tgcatccagt ttatccctaa tgtagcttgc tcttgcaaca ccatttgatg
    14881 atgctcatcg ctgtttttat gcgtgtgcga acaagcagtt aatacaaata aagctgtgag
    14941 gctcatagca gaaagtttga tgtttttcat acgtatatcc ttagttttat tgttgataaa
    15001 cagagcgatt atacctaaaa agagttgctt atggctaata gtttattgct cctattcact
    15061 tttaaagcaa actaaggtag cctagtaacc tttttataac aattacacag aggctatatg
    15121 caaacattat taaaatttac acaatttatc agcaaaacct tcgccatttg ggtggtgttt
    15181 tttgctttta tcgcagcaca atttccggaa acctttaagc aattcctgcc ttggattcct
    15241 tatctgttag ggattgtgat gttgggaatg gggttaacct taactttcaa agattttgcc
    15301 gaggtaacga aaaatccgaa atcagtgatt atcggcgtga tcgctcaatt cgtggtatgc
    15361 cgagtgtagc ttatggattg gcaaaagcat ttaacttacc cgcagattta gccattggtg
    15421 tgattttagt tggttgttgc ccgggcggta cttcttcaaa cgtgatgacc tatttggctc
    15481 gtggcaacac agcgttatcg gtagcttgta ccactatttc aactttactt gccccagtgc
    15541 tcacgccggc aattttctat ttatttgcca gccaatggtt agaaattaat gcaacggcaa
    15601 tgtttatttc ggtgttgcaa atggtgctat tgccaatttt tgtgggcgtg gtgattcgta
    15661 ctattttcaa acaaaaagta gagcaattta gccaaacaat gccattaatt tcagtgattg
    15721 caatcgtatt aattgtcacg gcggtggtgt cagttagccg agatcgtatt attgaatccg
    15781 gtttattaat ttttgcggta gtagcattac acaacggttt aggttattta atcggttatt
    15841 tggcgagccg tttattaaaa ttaccgattg cagacagcaa agcggtggcg attgaagtgg
    15901 ggatgcaaaa ctcaggattg ggggcagcac ttgccgcatt acactttaaa gccaacccta
    15961 tcattgcggt gccaagtgcg gtatttagct tctggcacaa tatttcaggc ccgattttgg
    16021 cgatgatttt cgctaaaatg aaaaacgata acgaaaaata aaattcgttt taatacagac
    16081 gttttaatgt tttaataaag aatagacaaa cggttaaatt tttctaattt tttgcaaaat
    16141 gttcagaaaa tttaaccgct tgttgtttag aatttagaac attcttggtc cacgtgcagt
    16201 gctgattttt tcatcatccg ctctttgggt aacaatcact tgatcaccct catttaagcc
    16261 tgctaatact tcggtatttt gcgtatccga aatgccaatt tggatttttc tttcaaccga
    16321 ctgctcattt tccagcacca acacataatt ctctttacca cgttttttga ttacgctggt
    16381 gggtacaact aaaacctgtt cccgtttatc aatagtaatt tgggcttgag tagtcattcc
    16441 gatgcgtaaa ctgttatcgg cattatcaac ggaaacatta gcgtagtaat aaaccgcttc
    16501 ggtattaccc gattgttcgg tgtagttatt atcggtcagc gtggtgagtg ccggatcaac
    16561 tgaatcaatg gtagcactat attctcgatt tggctcagca agggtggaaa acttaacttt
    16621 ttgcccgact ttaacctgtg caatatcgcc ctccgaaatt tcaagtttaa tcagcatctt
    16681 agataaatct gctacctgta caatagttgg cgaagtttga ttggaattga ccgtttgccc
    16741 gacagaaacc ggtacagaca caatcacgcc gtccattggc gagataattt gcgtataagt
    16801 taagttggtt ttagcatcgt ttaccgaaat ttcagccgat tttaattgtg ctttaatgtt
    16861 atccaccgtg gctttggctg aagctaaggt atttttagcc gtttcaagat cgtttaaaga
    16921 ggcactattt gcccgataga gtttatttaa gcggttgtag ttcgattgag ctacttcaag
    16981 tgcaacctgt gcagaggtga gctgtgcttt ataagaagaa agccgggctt gagcggtgct
    17041 taaggtgttg ctctggttgc tggaatcaat atctgcaatt aaatctcctt gcttcaccga
    17101 ttgcccgagc tcgacataga gtttttggat tttgcccgaa acttgagccc ccacttcggt
    17161 gcgtttattc gctcgaaccg aaccggttgc cagcacattt ttgttaattt ctgcccgtgt
    17221 gacagcttgg gtaatgtaat ggatttgcgg tttattggtt tgttgctgat aataaaaata
    17281 gccgcctatt ccgagagcgg caattagcac aagagtggct aatgttttac gtttcatact
    17341 gttccttgat gatatacaag cggtcaaatt tagacaaaaa tttgcaaaaa agttgctctc
    17401 aactaaacaa tgccaaatgt ggctcgaaga tagcttgcca ccgcttcatc tttgttaaag
    17461 ccaatcactt cattattcgg taatacggct tttaaacgtg gatcggcatt acccattaaa
    17521 caacctttgc cggctaaact tagcatttcc acatcattca taccgtcacc aaaagcgata
    17581 caatcggcta aggtgtagcc ccgtaatttg accaattcgg cgagagcatt ggctttacac
    17641 actccttttg ccatcacttc aaggcaaagt agggcagagt aggtcatttg cacacggtcg
    17701 ccataggtat cccgaatata atgttcaatc ggtactaaag cttcagcagt tttgccgata
    17761 aaaaacactt tctcggtatt tcgaccgtga tgatgagcaa aatttactac ttgatagcta
    17821 aatcctgaat cttgatggaa tttttttaac tctgcaatct ctttattgat aaaccattca
    17881 tcgccttgat agctgtttaa gcacacattt tggtcgtcaa attcaatgtt cattaattca
    17941 aaggcaagat cttccggtaa ataatggttg agaatttttt taccctctaa attgttggct
    18001 cttgccccgt ttgaagtgac taacattgca tttttaacgt ttactttccc aataatctga
    18061 gacacatctg gatgattgcg accggtggcg aaaaaaatat caacaccttt ttttgatagt
    18121 tgttctaatg tatcaatagt gaaatcacca attttatgat tggcatttaa tagtgtgcca
    18181 tcaagatcgg aaataattgc acgaaatggg agagtcataa tctattccta acaataaaat
    18241 a
//
LOCUS       DANLZQ010000040        18158 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.040, whole genome shotgun sequence.
ACCESSION   DANLZQ010000040 DANLZQ010000000
VERSION     DANLZQ010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 18158)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18158)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18158
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.040"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            75..1166
                     /gene="ulaG"
                     /locus_tag="PXE50_001249"
     CDS             75..1166
                     /gene="ulaG"
                     /locus_tag="PXE50_001249"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001863918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ascorbate 6-phosphate lactonase"
                     /protein_id="HDL5622171.1"
                     /translation="MSKIQEITRESWILSTFPEWGTWLNEEIEEEVVPEGNFAMWWLG
                     CVGVWIKTPAGANICMDLWCGRGKSTKKVKDMVRGHQMANMAGVRKLQPNLRAQPMVL
                     DPFAINEVDFILASHYHSDHIDVNVAAAICNNPKLDHVKFVGPWHCAELWKKWGVPEE
                     RIIVVKPGDVVKLKDVEIHALDSFDRTCLVTLPVEGAEERGGELAGLCPSDEEMGRKA
                     VNYVFKTPGGTIYHGADSHYSIQFAKHGKQFDIDVALNNYGENPVGIADKMTSVDLLR
                     MAECLRCKVIIPVHHDIWTNFMASTQEIIDLWRMRKDRLQYQFHPFIWEVGGKYVYPR
                     DKDLIEYHHPRGFDDCFEQEPNIQFKSML"
     gene            1250..1996
                     /gene="ulaR"
                     /locus_tag="PXE50_001250"
     CDS             1250..1996
                     /gene="ulaR"
                     /locus_tag="PXE50_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator UlaR"
                     /protein_id="HDL5622172.1"
                     /translation="MNESYRHKELLALLEERKALSTADIMQLLNISPATARRDISKLD
                     GQGKLKKVRNGAEAILAPTFLQHTKITNNAQEKRRIAEAAGRLCKDGESLILTCGSTM
                     EMLGEVLCGRKLQIITNYLPLANQLIAGCHDDVVIMGGQYNKHKKVMLSINTQNEMTY
                     AATTMFTSGKGLTSEGLFKTDMIIANAEQQMAKHAERYVVLLDSTKLGKKVGMLFKEF
                     DKIDLLITGKEADPTIIQALRNKGLDIILA"
     gene            2051..2911
                     /locus_tag="PXE50_001251"
     CDS             2051..2911
                     /locus_tag="PXE50_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 3-epimerase"
                     /protein_id="HDL5622173.1"
                     /translation="MRKHKLGIYEKALPKNISWQDRLSIAKVCGFDFVEMSIDETDER
                     LARLDWSKKERAKLVKTIINTGVTIPSMCLSGHRRFPFGSCDEATRQKAYEIMEKAIQ
                     LAVDLGIRTIQLAGYDVYYEEQDEGTIQRFQQGLEWAVELAASNQVTIAVEIMDTQFM
                     SSISRWKKWDEIIKSPWFTVYPDLGNLSAWNDNVAEELKLGIDKISAIHLKDTYKVTE
                     TCKGQFRDVPFGDGCVDFAACFKTLAELNYRGAFLIEMWTEKAEEPITEIINARRWIE
                     QKMQEGGFTL"
     gene            2908..3627
                     /locus_tag="PXE50_001252"
     CDS             2908..3627
                     /locus_tag="PXE50_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase"
                     /protein_id="HDL5622174.1"
                     /translation="MTQLTELTPALQALRERVLKANLELPKYGLVTFTWGNVSEIDRE
                     TGLVAIKPSGVEYDAMTVEDIVLVDLQGNRVYGDKKPSSDTETHLELYRQFTDIGGVV
                     HTHSRNAVGWAQAGRDLLALGTTQGDYFYGAIPCTRKMTAEEIAGSYELETGKVIVET
                     FRTRGIEPKAVPGVLVHSHGPFTWGKDGHDAVHNSVVLEEVAYMNFISHQIRPQIGPM
                     QQELLDKHYLRKHGANAYYGQ"
     gene            3848..6325
                     /locus_tag="PXE50_001253"
     CDS             3848..6325
                     /locus_tag="PXE50_001253"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012311.1,HMM:TIGR02601.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HDL5622175.1"
                     /translation="MYLLEGNQKVKNRNYFVAIATILALSPEVNATELSDQLASRTRY
                     YPSATDSYYSYYKYAPIYSGYYTSNSRNGYSSWYYPGSNAGVTTRTVSTTVNGITVTK
                     VYTTHNGRTTVRTTYAPAVNKPIVNKPTPIANKPVVDTPTQPVIDANPIMDPPVQPIV
                     DNKPITDTQPNPITDNKPVIESPIDDTRPVIIRPTTPVNLHPEPVAVGVPNVGIRWND
                     RSRGYNIDDPNNKQNVKLTGEGVKVGILDSGFKNYLMQDDILKKFGNRAVIIETGRTA
                     PASATHGIEVAEMVGGGNSRNGVASKSTLLLADITKTTNAGTGLSATAPIYYDLWNRG
                     ARIFNQSYGIPKPLTYFNNNRNSSYYYLHQFDGNVLQFYKDKVKEGGLFVWAAGNNRG
                     DLDPSLQAGLPHYEADLEKGWISVVAVATRTNQGLGNFEWSNLLPYSQAGVAKNWTVT
                     AMGDYIFNLGGRNIIASGSSFAAPAVTGTAALVKQKYPWMDGNLIKQSILSTATDIGA
                     PGVDDVYGWGLLNIEKATNGPARFGKRLALADNVTVNIPNGSYEFSNNINGDAGLVKN
                     GQGELILSGASTFEGDTTLNEGAVTINGKKYVSKVNVSPSGTLVVNNTTLENGVNNEG
                     TVVNQGYSTIKRAYVASAQSTLVSDLGSNLNVKGEVDLNGSTLSLAAVKEGKAQYVTQ
                     KGLSMSAITSDSAIKGNFAAIETSGLLTATAEKTNENEVKATVSRKNVATALESSFSA
                     LDNQIEGNNGSTNATNDEFAQQAATLQNSIANINTQSVVLDSLSGQIYASAQALTFEN
                     SETVNKDLSNRLVMLGTLDNVGETAGV"
     gene            6335..7150
                     /locus_tag="PXE50_001254"
     CDS             6335..7150
                     /locus_tag="PXE50_001254"
                     /inference="COORDINATES: protein motif:HMM:TIGR01414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HDL5622176.1"
                     /translation="MYGNGTLKEIGFGEGKTNTYAGQIGFDKPVTDHVILGAALNYSK
                     AKVNFDRYGGSSKADGIGASLYARIGNKHKTPWYLQGRAGYGSVDSDVERHIILADNN
                     ASTAKINHRDRVFSAYVESGYDFKQGRFALTPFVGFSHDVVRRGAFSEQNSQFGLTAD
                     KATYKQTSGLIGLRTSLEVNLAGMKTTFQGYVNHQKAFNREDLSFKASYTGLQDAKFD
                     VKGIGLAKHKTWVGIGALAEVNKNTSLYVNYDLKLAKNSGHNNVVTAGIRINF"
     gene            complement(7237..8097)
                     /gene="pdxY"
                     /locus_tag="PXE50_001255"
     CDS             complement(7237..8097)
                     /gene="pdxY"
                     /locus_tag="PXE50_001255"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005721193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal kinase PdxY"
                     /protein_id="HDL5622177.1"
                     /translation="MKNILSIQSHVVYGYAGNKASTFPMQLLGVDVWALNTVQFSNHT
                     QYGKWGGMVMPKEQIGSIVDGIHNIGELHRCDAVLSGYIGSAEQVAEIIQAFHKVKAE
                     NPNAIYVCDPVMGHPDKGCIVADGVKEGLINLAMAQADIITPNLVELRELTGLTVENF
                     EQAVEAVKVILTKGPKKVLVKHLSRVGKESNKFEMLFANQDGIWHISRPLYQFAKEPV
                     GVGDLTAGLFVANLLNGKSDLEAFEHTANAVNEVMEQTARSGLYELQIIASRDRIVNP
                     QCSYQAVKIA"
     gene            8216..8291
                     /locus_tag="PXE50_001256"
     tRNA            8216..8291
                     /locus_tag="PXE50_001256"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8249..8251,aa:Thr,seq:tgt)
     gene            complement(8386..9339)
                     /gene="accA"
                     /locus_tag="PXE50_001257"
     CDS             complement(8386..9339)
                     /gene="accA"
                     /locus_tag="PXE50_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit alpha"
                     /protein_id="HDL5622178.1"
                     /translation="MSQEFLDFELPIAELEAKIESLRAVSEQDDKINLDDEIKRLQKK
                     SEELTKKTFANLDAWQISRMARHPNRPYTLDYIEHIFTEFDELAGDRAFADDKAIVGG
                     IARLDGRPVMVIGHQKGRTVKEKVKRNFGMPAPEGYRKALRLMEMAERFNMPIITFID
                     TPGAYPGIGAEERGQSEAIARNLREMSQLSVPVICTVIGEGGSGGALAIGVGDKVNML
                     QYSTYSVISPEGCASILWKSADKASTAAEVMGLTAPRLKELELIDNIVPEPLGGAHRN
                     VEQIAQNLKQRIVEDLAGLDQLNKEDLLERRYQRLMNYGYV"
     gene            complement(9393..10817)
                     /locus_tag="PXE50_001258"
     CDS             complement(9393..10817)
                     /locus_tag="PXE50_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HDL5622179.1"
                     /translation="MKKQITRRQFLQGSALAAGFATVPTPLLAAERPQLNIPPLMDIG
                     RGKPVRLDLRPAQTQFDKGKLVDVWGVNGQYLAPTVRVKSGDFVKLTYLNNLPQKISM
                     NIQGLQASSEMIGTVHRSLDPKSSWSPIVSINQPACTCWYHADTMLNSAFQVYRGLAG
                     LWMIEDEQSKKATLPNKYGVNDIPLILQDQLLNKDGVQVLDKNTSQFFGKRLFVNGQE
                     SPYFNVPRGWVRLRIVNASLSRAYELRLDNEQPLYLIATGLGMLAEPLETESVQLAPS
                     ERVEVLVDLSEGKAVSLISGQKRDIFYKIGQVFADNDELNDNVILELRPEGMAAVLNN
                     KPSLPAFNLEEFNLKISQERRFAIRPADYLINQKRFDPKRIDFTAQKGSVERWYLHST
                     QAVGFTLQGAKFIIETLNRKQYPIKQLAWRDTVWLEAEQEITLLVRFDNTAPEQLPFT
                     FGVSDFMLRDRGTMGQFSVIENGQ"
     gene            complement(10819..11553)
                     /locus_tag="PXE50_001259"
     CDS             complement(10819..11553)
                     /locus_tag="PXE50_001259"
                     /EC_number="2.3.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acylglycerol-3-phosphate O-acyltransferase"
                     /protein_id="HDL5622180.1"
                     /translation="MLKIFRILIVALAAIFISIFGTIYALLRLRHPSSVGVVARWFGA
                     LHKLVGLELITRKKPEINYPVVYIGNHQNNYDMVTISSMVAEKTVSIGKKSLIWIPFF
                     GLVYWATGNIFIHREKRSSAIETMNKAGQIVKERNVSVWMFPEGTRSRGRGLLPFKTG
                     AFHLAISAGVPIVPVVCSNLHNKVDLNRSNNGTVICEMLDPIDTSGYSRENVKELMEK
                     CHQIMLAKFEQLNQEVEQLENTAKNA"
     gene            11700..12197
                     /gene="tpx"
                     /locus_tag="PXE50_001260"
     CDS             11700..12197
                     /gene="tpx"
                     /locus_tag="PXE50_001260"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005578656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HDL5622181.1"
                     /translation="MSKVTLAGSPIDVAGTFPQKGDVVADFTLVNSDLSDVSLSDFDG
                     KRKVLNIFPSIDTGICATSVRVFNQKAADVANTVVLCISADLPFAQARFCGAEGIENA
                     KVLSSFRHRDLHNKLGVDIISGPLAGLTSRSVIVLDENNKVLHSELVPEIKQEPDYEA
                     ALAVL"
     gene            complement(12282..13907)
                     /gene="yidC"
                     /locus_tag="PXE50_001261"
     CDS             complement(12282..13907)
                     /gene="yidC"
                     /locus_tag="PXE50_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HDL5622182.1"
                     /translation="MNNRGLLLMGLFLVSILIFTQWQQDFDPEIQAQKQAQVAAQTQQ
                     AGDLPSASNANNPIADSITQGKTITVESDVLRLTIDTLGGDVIGSDLLKHNAELHSNT
                     PFKLLQQDGDKIYVAQSGLVGKNGIDTNAGRPQYAVTADSFKLAEGQNEISVPLTFEK
                     EGVVYTKTFTLKRGSYDVGVNFNIKNNTAQAIEVQPYGQLKHSIVESSGNLTMPTYTG
                     GAYSSSETNYKKYSFQDMEKANLSVDTKAGWIAVLQHYFVSAWVPNQDADNSLYSRTN
                     NGVATIGYRGPLTTIAPNSEANLNSKLWTGSKDQKEMGESANHLDLTVDYGWAWFIAK
                     PLFWLLTAIQKIVSNWGLAIIGVTIVVKTILYPLTKAQYTSMAKMRMLQPRITEMRER
                     FGDDRQRMSQEMMKLYREEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGW
                     IQDLSAQDPYYILPLLMGGSMFLLQKMSPTPVADPVQQKVMTFMPVIFTVFFLWFPSG
                     LVLYWLTSNLITIAQQWLIYRNLEKKGLHSRKK"
     gene            complement(14060..14485)
                     /locus_tag="PXE50_001262"
     CDS             complement(14060..14485)
                     /locus_tag="PXE50_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hotdog fold thioesterase"
                     /protein_id="HDL5622183.1"
                     /translation="MTIWKQTATCEQLNTLSQKSAVSHLGIEFTAIGEDWIEAQLQVD
                     ERTQQPFGVLHGGVSAALAETTANAGALMVCEPHQIAVGMELNISHLKSIPAGTKAIA
                     KATPLKLGREVQVWNIDIKDEQGNLCAVARLSTKTLDKR"
     gene            complement(14814..17906)
                     /locus_tag="PXE50_001263"
     CDS             complement(14814..17906)
                     /locus_tag="PXE50_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HDL5622184.1"
                     /translation="MIPRLSEVPQLDKATQSYLTELVNQHFSGEIASNYADRLSLATD
                     NSVYQQIPQAILFPKSVSDVVILTKLAQKPEYQHLTFTPRGGGTGTNGQSLNNNIIVD
                     LSRHMNQILELNVEERWVRVQAGVVKDQLNQFLKPHGLFFSPELSTSNRATLGGMINT
                     DASGQGSLQYGKTSDHILAIKSVLINGDILETQAVKSADFFAHIEGLNLSALGKTLHR
                     EIFNRCKTLRPKVLNELPQLNRFITGYDLKNVFNHGESEFNLTRILTGSEGSLAFICE
                     AKLNLLPIPKYRTLINIKYNSFDAALRSAPFMLEAKALSVETVDSKVLNLAKQDIVWH
                     SVSDLLTEDPANPILGINIVEYASSDQTQIETQVKALCQSLDQKMANNEAGIIGYQLT
                     SDVNSIEKIYAMRKKAVGLLGNAKGWAKPIAFVEDTAVPPENLADYIVEFRALLDRYN
                     LPYGMFGHVDAGVLHVRPALDLCDKAQVETFKQISDQVVELTAKYGGLIWGEHGKGMR
                     SYYGERFFGETLWQELRYIKTLFDPYNRLNPGKICTPLESETSLYPIDSQMRADFDRQ
                     IPIQVREEFKGAMNCNGNGLCFNFDVHSTMCPSMKVSGNRLYSPKGRATLVREWLRLL
                     TEQNVSPDDLIFKPRKQAVKLADFVAKIRNTLNKNKEYDFSHEVKAAMDTCLACKACA
                     SQCPIKIDVPTFRSQFNELYHSRYLRPLKDYVVSNLEFIAPLMAKQPRFFNFFSTSTF
                     AEKAANKTIGMTYLPALSVPNLQHQLVEVGYQGESLESLEQQATSGDFSAKNCKTLFI
                     VQDPFTSYYDAKVVADFIALIKKLGFKPIVLPFKPSGKAQHVKGFLHKFAKTAKNQAD
                     FLNRVAKLGLPMVAVDPALTLLYREEYKEILKEARGDFKVLLAHEWLREVIKNGELEN
                     CKKSANSDRLPWYLFAHCTESTALPSSMKEWQAIFTHFGETLLNENVGCCGMAGTFGH
                     ETKHVEMSKAIYQQSWQIKLKNKPLERCLATGYSCRSQVKRFEQQGIKHPIQALLDVI
                     "
BASE COUNT         5192 a         3658 c         3957 g         5351 t
ORIGIN      
        1 tacaaatttt tgtgattgtt tatgattggt tttgattgca ttgttcttat tttagcgtaa
       61 atcaggagac tattatgagc aaaattcaag aaatcactcg tgaaagctgg atcctttcaa
      121 ctttccctga atggggtact tggttgaatg aagaaattga agaagaagtt gtaccggaag
      181 gcaattttgc aatgtggtgg ctaggctgtg tcggtgtgtg gattaaaacc ccagctggtg
      241 cgaatatctg tatggattta tggtgcggtc gtggtaaatc caccaagaaa gtaaaagata
      301 tggtgcgtgg tcatcaaatg gcaaatatgg caggggtgcg taagctccag cctaatttgc
      361 gggctcaacc gatggtgtta gatccgtttg cgattaacga agtggacttc attctcgctt
      421 ctcactatca ctcagaccat attgatgtaa acgtggcagc ggctatttgc aataacccga
      481 aattagacca cgttaaattt gtcggccctt ggcactgtgc agaattatgg aaaaaatggg
      541 gcgtgccgga agaacgtatt attgtggtaa aaccgggcga tgtcgtgaaa ttaaaagatg
      601 tagaaattca cgccctagat tcatttgacc gtacctgttt agtgacctta ccggtagaag
      661 gtgcagaaga acgtggcgga gaacttgcag gcttatgccc atcagatgaa gaaatgggac
      721 gcaaagcggt gaactatgtg ttcaaaaccc cgggcggtac gatttatcac ggtgcagatt
      781 ctcactactc aatccaattc gctaaacacg gtaagcaatt tgatattgac gtagcgctga
      841 ataactatgg cgaaaacccg gttggtattg cggataaaat gacttcagtt gatttattac
      901 gtatggcgga gtgtttacgc tgtaaagtga ttattccggt tcaccatgat atttggacaa
      961 actttatggc aagtacgcaa gaaattattg atttatggcg tatgcgtaaa gatcgcttac
     1021 aataccaatt ccacccattt atttgggaag tgggcggcaa atatgtttac ccacgtgata
     1081 aagacttaat tgaatatcat caccctcgcg gctttgatga ctgcttcgag caagagccaa
     1141 atattcaatt taaatccatg ctataggtga gcagtcgcca ctctcactgg agagtggcgt
     1201 tttagcaagt tcattatgga gcagtagtga ttagtaatgg gataaagtag tgaacgaaag
     1261 ttatagacac aaagagttat tagccctgtt ggaagagcgg aaagcactgt caacagcaga
     1321 tattatgcag ctgttaaata tttctccggc aacagcaaga cgtgatatca gtaaattaga
     1381 tggtcaaggt aaattaaaaa aggttagaaa cggagcagaa gcaattctgg ctcctacatt
     1441 tttacagcac acaaaaataa ctaacaatgc gcaggagaaa cgtagaatag cggaagctgc
     1501 cggtcgttta tgtaaagatg gggaaagtct tattctgacg tgtggttcca caatggaaat
     1561 gctcggtgaa gtattatgtg gtagaaaatt gcaaattatt accaattatc taccgcttgc
     1621 aaaccagttg attgcaggtt gccacgatga tgtagtgatt atgggtgggc aatataataa
     1681 acataaaaaa gtgatgctct caattaacac ccaaaatgag atgacttatg ccgctaccac
     1741 aatgtttacc agtggcaaag gcttaaccag cgaaggatta tttaaaaccg atatgattat
     1801 tgccaatgcc gagcaacaaa tggcaaagca cgcagaacgt tatgtggtgt tattggatag
     1861 caccaagctc ggcaaaaaag tcggtatgct gtttaaagag ttcgataaaa ttgatttatt
     1921 gattaccggc aaagaggcgg atccgactat tatccaagca ttaagaaaca aaggcctgga
     1981 tattatcttg gcttagcctg tagcggtcaa atttaatcaa aattttactt atcatcttca
     2041 agggaaaact atgagaaaac ataaactggg tatttacgaa aaggccttgc cgaaaaacat
     2101 ttcgtggcaa gaccgccttt ctatcgccaa agtctgcggt tttgactttg tggaaatgtc
     2161 gattgacgaa acggacgaac gcttagcccg ccttgattgg agcaaaaaag aacgtgccaa
     2221 gctggtgaaa accatcatca acaccggcgt gaccattccg tcaatgtgct tgtccggtca
     2281 tcgccgtttc ccgtttggtt cttgtgatga agcgacccgc caaaaagcct atgaaattat
     2341 ggaaaaagcc attcaactgg cggtcgatct cggtattcgc accattcagc ttgccggcta
     2401 tgacgtctat tacgaagagc aggacgaagg cacaatccaa cgcttccaac aaggcttaga
     2461 atgggcggtg gagctggcgg caagcaacca agttaccatt gcggtggaaa ttatggacac
     2521 ccaatttatg agttcgattt cccgctggaa aaaatgggac gagatcatca aatcaccgtg
     2581 gttcaccgtg tatccagatt taggcaacct ctcagcgtgg aacgacaacg tagcggaaga
     2641 gctgaaactc ggcatcgaca aaatctctgc cattcactta aaagacactt acaaagtgac
     2701 tgaaacctgc aaagggcagt tccgtgatgt gccatttggt gacggttgcg tagatttcgc
     2761 cgcttgtttt aaaacccttg ccgagctgaa ttaccgtggc gcattcttaa ttgaaatgtg
     2821 gacggaaaaa gccgaagagc cgattactga aatcatcaac gcccgccgtt ggatcgaaca
     2881 aaaaatgcaa gaaggaggat ttaccctatg acgcaattaa ctgaattaac ccctgcatta
     2941 caagccttaa gagagcgtgt gttaaaagcc aatttagaat taccgaagta tggcttggta
     3001 actttcactt ggggtaacgt aagtgaaatc gaccgtgaga ccggtttagt cgccatcaaa
     3061 ccttccggcg tagaatacga tgcgatgacg gtggaagaca ttgtattggt tgatttacaa
     3121 ggtaatcgag tttacggaga taaaaaaccg tcttctgata cagaaacgca cttagaactt
     3181 tatcgccaat tcactgatat tggcggtgtg gtacacactc actctcgcaa tgctgtaggt
     3241 tgggcacaag cagggcgtga tttattggca cttggcacca ctcaaggcga ttatttctac
     3301 ggtgcgattc cttgtactcg caaaatgacc gcagaggaaa ttgccggcag ttatgagctg
     3361 gaaaccggaa aggtgattgt cgaaactttc cgaactcgag gtattgaacc gaaagcagtt
     3421 ccaggtgtgt tggtacattc acacggtcca tttacctggg gaaaagatgg acacgatgct
     3481 gtgcataatt ctgtggtatt agaagaggtg gcttacatga attttattag ccatcaaatt
     3541 cgcccacaaa ttggcccaat gcaacaggaa ttattagata agcattatct gcgtaagcat
     3601 ggtgcaaatg cttattatgg gcaatagcta ataacctaaa aattattttc caaattatca
     3661 acagctttcg aggggctttc tataatcgga atagctcctc agtctgtttg agtttatgga
     3721 tagatccaca aataattacc attttccttt tcttgatttt aattttgatt tttgttctaa
     3781 tctctgcctc ttgtttttac aagtctatta aggatccgta gtagatttga aataaacaag
     3841 agtatctttg tatttattag aaggaaacca aaaggtgaaa aatagaaatt attttgttgc
     3901 aatagcaaca atattagcct tatcgccaga ggttaacgca actgaacttt cagatcagct
     3961 tgcaagtaga acaagatatt atccttccgc cacggatagt tattatagtt actataaata
     4021 tgcaccgatt tattcgggct actatacatc gaatagccgt aatggttatt cgtcgtggta
     4081 ttatccaggt agcaatgcag gtgtaacaac cagaactgtt tcgacaacag ttaatggcat
     4141 tacagttaca aaagtttata caacgcataa tgggagaaca accgttcgta ccacttatgc
     4201 tcctgctgtg aacaaaccaa ttgtaaataa accgacaccg attgccaata aacccgttgt
     4261 agatacgcca actcaaccgg ttattgatgc caacccaatt atggatccgc cagtccaacc
     4321 aatagttgat aataaaccca tcactgatac acagcctaat ccaattacag ataacaaacc
     4381 tgtcattgaa tcgccaattg atgacacccg tccagttatc attaggccta caacaccggt
     4441 aaatcttcat cctgaacctg tagctgttgg tgtacccaat gtaggtattc gatggaatga
     4501 ccgctctcgt ggttacaaca ttgatgatcc taataacaaa caaaatgtta agttaactgg
     4561 tgaaggtgtt aaagtcggta tcttagatag tggttttaaa aactatttaa tgcaggacga
     4621 tatactcaaa aaatttggta atcgcgctgt tattattgaa acagggcgta ctgccccggc
     4681 ttctgcaaca catggtattg aggtcgcaga aatggttggg ggagggaact ctcgcaatgg
     4741 agtagcgtct aagtcaacgt tattacttgc ggatattacc aaaacaacaa atgcgggtac
     4801 aggattatcc gcaacagctc caatttatta tgacttatgg aataggggag cccgtatttt
     4861 taaccaatca tacggtattc caaagcctct tacttatttt aataacaata gaaattctag
     4921 ctattactat ttacaccaat ttgatggtaa tgtgttgcaa ttctataagg ataaagtaaa
     4981 agaggggggc ttatttgtct gggctgcggg gaataaccgt ggtgatcttg atccatcact
     5041 ccaagctggg ttacctcatt atgaagctga cttggaaaaa ggttggattt ctgttgttgc
     5101 ggtagcaacc agaactaatc agggattggg taactttgaa tggagcaatt tattgccata
     5161 ttctcaagcc ggtgtggcaa aaaattggac cgttaccgca atgggtgact acatctttaa
     5221 tttaggaggt agaaacatta ttgctagtgg ttcatccttt gcagctccag ccgttacggg
     5281 tacagcagct ctcgtgaaac aaaaatatcc ttggatggat ggtaacctta tcaaacaatc
     5341 tattctctcg acggcaaccg atatcggcgc tcctggagtt gatgatgtat atggatgggg
     5401 tttacttaat attgaaaaag ccactaatgg ccctgcgcgt tttggtaaac gactcgcttt
     5461 agccgataac gtgactgtaa atattccaaa tggaagctat gagttttcca ataatattaa
     5521 cggtgatgca ggcttggtga aaaatggcca aggcgaatta attttatcgg gtgctagtac
     5581 ttttgaaggg gatacaacac tcaatgaagg tgctgtcact attaacggta aaaaatatgt
     5641 gtctaaagta aacgtatctc caagtggtac attggttgtc aataatacca cgttagaaaa
     5701 tggcgtaaat aacgagggta cagttgtcaa ccagggttat tctacgatta agagagctta
     5761 cgttgcttca gcacaaagta cgctagtgtc agatttaggt tcaaacttaa atgtaaaagg
     5821 agaagttgac ttaaacggct ctactttatc actagctgcg gtaaaagagg gtaaagctca
     5881 gtatgtgacc caaaaaggtt tatcaatgag tgctattact tctgattccg caattaaggg
     5941 taactttgct gcaatagaaa cctcagggtt attaactgcg acggcggaaa aaaccaatga
     6001 gaatgaagta aaagcaacag ttagccggaa aaatgtcgcg actgctttag agagctcatt
     6061 ttcggcattg gataaccaaa ttgaaggaaa taatggttct acaaatgcta caaatgatga
     6121 attcgcacaa caagcggcta ctttacaaaa cagtattgca aacatcaata cgcaaagtgt
     6181 ggttttagat agcttatctg gtcaaattta tgcgtctgcg caagcgctta cttttgaaaa
     6241 ctcagaaaca gtgaataaag atctctctaa ccgtcttgta atgttaggaa cgctggataa
     6301 tgtaggtgag actgctggtg tgtgagtaac gggtatttat gggaatggta ctctaaaaga
     6361 aatagggttt ggtgaaggta aaaccaatac ctatgctggc caaataggtt ttgataagcc
     6421 agttacagac catgtgattt taggtgcggc acttaattat tctaaagcaa aagtgaactt
     6481 cgatcgttat ggcggtagtt caaaagcaga tggaataggt gcatcattat atgcccgtat
     6541 aggcaataag cataaaacac cttggtattt acaaggtcga gccggttatg gcagtgttga
     6601 ttcagatgta gagcgtcata ttattttggc ggataataac gcaagtacag caaaaatcaa
     6661 ccaccgagac agagtatttt ctgcttatgt tgaatcaggc tatgacttca agcaaggtcg
     6721 ctttgcgtta actccatttg tcggttttag tcatgatgtt gtcagacgtg gcgcattcag
     6781 tgagcaaaac agtcaatttg gtctcaccgc ggacaaagca acctataaac aaacaagcgg
     6841 attgattggt ttacgaacat ctttagaggt gaatttagct gggatgaaaa cgactttcca
     6901 aggctatgta aatcatcaaa aagcgtttaa tcgagaagat cttagcttta aagcaagtta
     6961 tacaggttta caagatgcaa aattcgacgt aaaaggtatt gggcttgcaa aacataaaac
     7021 gtgggtaggg attggtgcat tggcggaagt aaataaaaat acttccttat atgtgaatta
     7081 cgaccttaaa ctcgcaaaaa atagtggtca caacaacgtt gtgactgctg ggattagaat
     7141 taatttctaa ctgaatcttt ttaaacaaaa cgggcgttta tacgcccgtt tttttatagt
     7201 tatagagata ataatgttat tttatacttc atttaattag gcaatcttta cagcttggta
     7261 actacactgt ggattaacaa tccgatcacg agaagcaata atttgtaact cataaagccc
     7321 tgatctagcg gtttgttcca ttacctcatt gaccgcattt gcagtgtgtt caaaggcttc
     7381 tagatcggat tttccattta ataagttcgc cacaaatagc cctgcggtta aatcgcctac
     7441 accgacaggt tctttggcaa attggtagag tgggcggctg atgtgccaaa tgccatcttg
     7501 gttggcgaac agcatttcaa atttgttgct ctctttgccg actcggctta aatgtttaac
     7561 caatactttt ttcgggcctt tggttaaaat cactttcact gcctcgaccg cttgctcaaa
     7621 attttccacc gttaaaccgg ttaattctct taattccact aaatttggtg tgataatgtc
     7681 ggcttgtgcc attgccagat tgatcaatcc ctcttttacg ccgtctgcca caatgcagcc
     7741 tttgtcgggg tgtcccatta ccgggtcgca tacataaatt gcgtttggat tttccgcttt
     7801 cactttatga aaagcctgaa taatttcggc tacttgttct gccgagccga tatagccaga
     7861 gagtacggca tcgcaacgat gcagttcacc gatattgtga atgccatcaa caatgctacc
     7921 gatttgttct tttggcatca ccataccgcc ccattttcca tattgggtat ggttggaaaa
     7981 ctgtacggta tttaacgccc atacatcaac acctaacagc tgcataggaa aagttgaagc
     8041 cttattgccg gcatagccgt agacaacgtg cgattgtatg gatagtatgt ttttcattca
     8101 ttcactcctt taaaatttca atatgtgttg ttttttagtc atttgaagtt gcaaggactt
     8161 gaagctcatc aagaaatctc tataatcccg cctcgttctc ttatccattc aatatgccga
     8221 cttagctcag taggtagagc aactgacttg taatcagtag gtcaccagtt cgattccggt
     8281 agtcggcacc atcaccttta ttttctgatg agtccccttt aatgtaaaat ggcaagattt
     8341 tgcaaatttt cacaaaaatc ttaccgcttg tagggtgaaa ttgaattaga cgtaaccgta
     8401 attcattaag cgttgataac ggcgttccag taaatcctct ttattaagtt gatctaaccc
     8461 tgccaaatct tcaacaatac gctgtttaag gttttgggcg atttgttcaa cattgcgatg
     8521 agcaccgcct aagggttccg gcacgatgtt atcaatcagc tcaagctctt ttaaacgagg
     8581 ggcagttaaa cccattactt ctgctgccgt tgaggcttta tcggcacttt tccacagaat
     8641 cgaggcacag ccttcaggtg aaattaccga gtaagttgaa tattgcaaca tattgacctt
     8701 atcgcccaca ccgatcgcta atgcaccgcc cgagccacct tcgccaatta ccgtacagat
     8761 tactggcacg gaaagttgag acatttcacg caggttacgg gcaatcgctt ctgactgacc
     8821 acgctcttcc gcaccaatgc ccggataagc tcccggtgtg tcgataaagg tgatgattgg
     8881 catattaaag cgttctgcca tttccattaa acgtaacgct ttgcgatagc cttcaggagc
     8941 aggcatacca aagttacgtt tcactttctc ttttacggta cgacctttct gatgaccgat
     9001 aaccatcacc ggacgtccgt ccagacgggc aataccaccg acaatcgctt tatcatcggc
     9061 aaaggcacgg tcgcctgcca gttcgtcaaa ttcggtgaaa atatgctcaa tataatctaa
     9121 agtgtacggg cgattggggt ggcgtgccat acgggaaatt tgccacgcat ctaaattagc
     9181 aaaggttttc ttggttaatt cctcgctttt cttttgtaaa cgcttgattt catcatcaag
     9241 attaattttg tcatcttgct cgctgactgc tcttaaagac tcgatcttgg cttccaattc
     9301 agcaatcggc aattcaaaat ctaaaaattc ttggctcatt ctattttcct ttttatgggc
     9361 aaaattatgg ggcattatcg cttatcagtc ggttattgtc cattttcaat tacgctaaat
     9421 tgacccatcg tacctctatc acgcagcata aaatcgctca cgccaaaggt aaatggcagt
     9481 tgctcagggg cagtattatc aaagcgaacc aacagcgtga tttcttgctc cgcctcgagc
     9541 caaacggtgt cccgccacgc aagttgtttg atagggtatt gcttgcggtt tagggtttca
     9601 ataatgaatt ttgcaccttg tagcgtaaat ccgaccgctt gtgtgctatg taaataccaa
     9661 cgctcaacgc tgcctttttg cgcggtaaaa tcaatgcgtt ttgggtcaaa ccgcttttgg
     9721 ttgattaaat aatcagccgg acgaatggca aaacgtctct cttggctgat tttcaggtta
     9781 aattcctcta agttgaaagc cggtaaactc ggtttattat tcaataccgc tgccattcct
     9841 tcagggcgaa gctctaaaat cacgttatca ttcaattcgt cgttgtcagc aaagacctgc
     9901 ccgattttgt aaaaaatatc tcttttttga ccgcttatca gcgataccgc tttcccttcg
     9961 cttaaatcga ccaacacttc caccctttca ctcggtgcaa gttgaaccga ttcggtttca
    10021 agtggctctg ccagcattcc taagccggtg gcgattaggt acaacggctg ctcgttatct
    10081 aagcgtaatt cataagcacg ggaaagtgag gcattgacga tccgcaatct gacccagcca
    10141 cgaggcacgt taaaataagg cgattcctgc ccgttgacaa ataatcgctt accgaaaaat
    10201 tgtgaggtgt ttttatctaa cacctgtacg ccgtctttgt tgagcagctg gtcttgcaga
    10261 attaacggaa tgtcgttcac gccatattta ttcggtaaag tggctttttt gctctgttca
    10321 tcttcaatca tccacaagcc ggctaagcca cgatacactt ggaatgccga gttgagcatt
    10381 gtatcggcgt gataccaaca agtacaagcc ggttgattga tagaaacaat cggcgaccag
    10441 ctacttttgg ggtcaaggga acgatgcacc gtgccaatca tctcacttga ggcttgcaat
    10501 ccttgaatat tcattgagat tttttgcggt aaattattga gataagttaa tttgacaaaa
    10561 tcccccgatt ttacccgtac ggttggggca agatattgcc cgttcacacc ccatacatca
    10621 accaatttgc ctttatcaaa ttgggtttgt gcggggcgta aatccaaccg aaccggcttt
    10681 cctcgcccaa tatccattaa aggcggaatg ttcagttgcg gtcgctctgc tgctaatagc
    10741 ggtgttggca ctgttgcaaa tccagccgca agggcagagc cttgtaaaaa ttggcgtcgg
    10801 gtgatctgtt ttttcatatt aggcgttttt tgcagtgttt tctaactgtt cgacttcttg
    10861 attaagttgt tcaaattttg ccaacataat ttgatggcac ttttccatca gttctttgac
    10921 gttttcacgg gaatagcctg aagtatcaat cggatcaagc atttcacaga ttactgtgcc
    10981 gttatttgaa cggttcaaat ccactttatt gtgtaaatta gagcaaacta ccggcacaat
    11041 cggcacgccg gcagaaatgg ctaaatggaa tgcaccggtt ttaaatggca gtaaaccacg
    11101 cccacggcta cgagtacctt ccgggaacat ccacaccgac acattgcgtt ctttcacgat
    11161 ttgccctgct ttattcattg tttcaatcgc actggaacgc ttttcacggt gaataaaaat
    11221 attgccggtt gcccagtaaa ccaaaccgaa aaacggaatc caaatcaggc tttttttgcc
    11281 gatactcacc gtcttttctg ccaccattga ggaaatcgtt accatatcgt aattgttttg
    11341 atgattgccg atatagacaa ccggatagtt aatttccggc tttttgcggg taattaattc
    11401 caacccgact aatttatgca aagcaccaaa ccaacgagct accacaccca cgctacttgg
    11461 gtgacgtaaa cgcagtaacg cataaatagt gccaaaaata gaaatgaaaa tagcggcaag
    11521 ggcaacaatt aaaatacgaa aaatttttaa cataatggaa taaccttaaa aataaattgt
    11581 ctaggagtat agcaaaataa ggttattttc taaaggctat ccacattaaa ttgatagttt
    11641 cctattttgc aaaaaatcgg tatatttaaa ccgcttgttt atttgataag gagaaaaaaa
    11701 tgagtaaagt gactttagca ggaagcccga ttgatgttgc aggcacattt ccacaaaaag
    11761 gcgatgtggt tgccgatttt accttagtca acagtgattt aagtgatgtt tcgctttccg
    11821 attttgatgg caaacgcaaa gtgttaaata ttttcccaag tattgacacc ggcatttgtg
    11881 ccacttctgt gcgtgtgttt aatcaaaaag cggctgatgt agcgaatacg gttgtccttt
    11941 gtatttcagc ggatttacct tttgcccaag cacgtttctg tggagcagaa ggaattgaaa
    12001 atgccaaagt attatccagt ttccgtcatc gtgatttaca caacaaactg ggggtagata
    12061 ttatttcagg tccgttggca ggcttaactt cacgttcagt aattgtgtta gatgaaaaca
    12121 acaaggtatt acacagcgaa ttagtgccgg aaattaaaca agagccggat tatgaggcgg
    12181 cgttagcggt attataattt gcagaattat gctggaaaat aaccgcttgt aaagcaacaa
    12241 aaagcccgtt gattcaattc aacgggcttt gtttttagtg attatttctt acgagagtgt
    12301 aagccttttt tctcaaggtt acggtaaatc aaccattgct gtgcaatcgt gattaagttt
    12361 gaggttaacc agtaaagcac taagcctgat gggaaccata agaagaacac ggtaaagata
    12421 accggcataa aggtcattac tttttgttgt accgggtcag ctaccggtgt tggcgacatt
    12481 ttttgtaaca agaacatcga accacccatt aataaaggca aaatgtagta tgggtcttgt
    12541 gccgataagt cttgaatcca gccgaagaaa ggtgcgtggc gtaattctac cgcttccata
    12601 aatgtccaat ataaagcaat gaaaatcggc atttggatta aaattggtaa gcagccaccc
    12661 attgggttca ctttttcttc tctgtagagt ttcatcatct cttggctcat acgttggcgg
    12721 tcgtcgccga aacgttcacg catttcagta atgcgaggtt gtaacatacg catttttgcc
    12781 atcgaggtgt attgtgcttt ggttaatggg taaagaatgg ttttcactac aatagtgaca
    12841 ccgataattg ccaagcccca gttgcttacg attttttgaa ttgcggttag taaccagaaa
    12901 agcggtttag cgataaacca cgcccagccg taatctacgg ttaagtctag gtgatttgct
    12961 gattcgccca tttctttctg atctttagaa cctgtccaaa gtttgctatt taaattagcc
    13021 tctgaatttg gcgcaatcgt agttaaaggg ccacggtaac cgatagttgc taccccatta
    13081 ttggtgcgtg aataaaggct gttatccgca tcttggtttg gcacccaagc agacacgaaa
    13141 tagtgctgta ataccgcaat ccaacccgct ttggtgtcca cgcttaagtt ggctttttcc
    13201 atatcttgga aactgtattt tttgtagttg gtttctgaag aagaataagc cccgccggtg
    13261 taagtcggca tggttaaatt gccggaactt tcaactatag agtgttttaa ttgcccgtaa
    13321 ggctgaactt caatcgcttg tgcagtatta tttttgatat tgaagtttac cccaacatcg
    13381 tagctaccac gttttagcgt gaaagttttg gtgtaaacca caccctcttt ttcaaaggtt
    13441 aatggtacag aaatttcatt ttgcccttcg gctaatttga agctatctgc cgttaccgca
    13501 tattgtgggc gaccggcatt ggtatcaatc ccgtttttac ccactaaacc gctttgagca
    13561 acgtagattt tgtcgccgtc ttgctgtaat agtttaaatg gcgtgttaga gtgtaattca
    13621 gcattgtgtt ttaacaaatc tgagccgatg acatcaccgc ctaaggtatc aatagtcaga
    13681 cgtaatacat cgctttccac ggtaatggtt ttaccttgcg tgatgctatc tgcgattgga
    13741 ttattggcat tggaagcaga cggaagatca cccgcttgtt gggtttgtgc tgccacttga
    13801 gcttgttttt gtgcttgaat ttcaggatca aaatcttgtt gccattgtgt aaaaatcaaa
    13861 atagacacaa gaaataaacc cattagcagt aagccacgat tattcatgtt ggaattctct
    13921 tgttagtaat ggataaaaag aaaggtattt tataataggt tagcttgttt tccaaacgcc
    13981 ttttatgaac aagcggtcgg attttccaag ttttttgcaa aattttcgga gaatttgacc
    14041 gcttgtggag aataagaaac tagcgtttat ctaaggtttt ggtggaaagg cgagcaactg
    14101 cacacaggtt accttgttcg tctttaatgt cgatattcca aacctgtact tcacgcccta
    14161 atttcagcgg tgtagctttg gcaatcgctt ttgtgcctgc cggaatcgat tttaaatggc
    14221 tgatgtttag ctccattccc accgcaattt gatggggttc acacaccatt aacgcccctg
    14281 cattggcagt agtttccgcg agtgctgccg atacaccgcc gtgcaatacg ccaaacggct
    14341 gttgagtgcg ttcgtccacc tgaagctgtg cttcaatcca atcttcaccg atagcggtaa
    14401 attcaatccc taagtgtgac accgccgatt tttggctgag tgtgtttaat tgttcacaag
    14461 ttgctgtttg cttccaaatg gtcattatta tttcctgtct aataaaaaag ctgtctattt
    14521 agacagcttt cattatctct ttgagcgaaa catactacgc caatagtaca ttgtttggtc
    14581 gcccatatta ccttaagcca tatagcacta aggaggtgat ttatgtgaga aaatcagaag
    14641 ttttctttct ggttgcgttg ctaatattat tagcaacttc cgctagcatt aaagtactca
    14701 ccatacttga tgtgctagtt tggttattcg ctagataacc taaaatcaga cagaggcagg
    14761 ctggttacct gcctcgcttt ttattctaag tacttttagg ttacatttca accttaaatc
    14821 acgtccagca acgcttgaat tgggtgttta atgccttgtt gttcaaaacg tttgacttgc
    14881 gagcggcagg agtagccggt tgctaggcaa cgctcaagcg gtttattttt taatttaatt
    14941 tgccatgatt gctgataaat cgctttcgac atttcaacgt gtttggtttc gtgtccgaac
    15001 gtgcctgcca ttccacagca accgacattt tcattgagta aggtttcacc aaaatgggtg
    15061 aaaatagctt gccactcttt cattgagctt ggcaaggcgg tggattcggt gcagtgagca
    15121 aataaatacc acggcaagcg gtcggaattt gccgattttt tgcaattttc cagctcgccg
    15181 tttttaatca cttcccttaa ccattcgtgt gccaataaga ctttgaaatc cccccgagct
    15241 tctttgagga tctctttgta ttcttcacga taaagcaaag ttaaggcagg atcgacagcc
    15301 accatcggta gccccaattt cgccacacgg tttaaaaaat cggcttggtt tttcgctgtt
    15361 ttcgcaaatt tatgcaaaaa gcctttaacg tgttgtgctt taccgcttgg cttgaatggc
    15421 aacacaatcg gcttaaagcc taatttttta atgagagcga taaagtctgc caccactttg
    15481 gcatcgtaat aagaggtaaa cggatcttgc acaataaaca aggttttgca attttttgca
    15541 gaaaaatcac cgcttgtagc ttgttgttca aggctttcta agctctcgcc ttggtagccg
    15601 acttccacca actgatgttg cagatttggc actgacaatg ccggcaaata ggtcattcca
    15661 atggttttgt ttgcagcttt ttcggcaaaa gttgaggtgc tgaaaaagtt aaaaaaacgt
    15721 ggttgtttcg ccattaaagg ggcgataaat tctaagtttg agaccacata atctttcagt
    15781 ggtcgcaaat agcggctgtg gtaaagctcg ttaaattgcg atctgaacgt cggtacgtca
    15841 attttgattg ggcattggct ggcacaggct ttgcaggcaa ggcaggtgtc catcgccgct
    15901 ttgacttcgt gtgaaaaatc atactctttg tttttattga gcgtgttgcg aatttttgca
    15961 acaaaatcag ctaatttgac cgcttgtttg cgaggtttga agatcaaatc gtccggcgaa
    16021 acgttttgtt cggtaagtaa tctgagccat tcacgcacaa gagtagcccg ccctttcggt
    16081 gagtaaagac ggttgcccga gactttcatt gaagggcaca tcgtgctgtg tacatcaaag
    16141 ttaaaacata gcccgttgcc gttacaattc attgctcctt taaattcttc tcgcacttgg
    16201 attggaattt ggcggtcaaa atcggctcgc atttgtgagt caatcgggta gagcgaggtt
    16261 tcgctttcta atggtgtaca aattttacct gggttcaagc gattgtacgg gtcaaataag
    16321 gttttgatgt aacggagttc ttgccacaaa gtttcgccaa agaaacgttc gccgtagtaa
    16381 gaacgcatac ctttgccgtg ttcgccccaa atcaagccac cgtatttggc ggtgagttcg
    16441 actacttggt cggaaatttg cttaaaggtt tccacttggg ctttgtcgca taagtcaaga
    16501 gcagggcgaa cgtgtagcac gccggcatca acgtggccga acattccgta aggcagatta
    16561 tagcgatcta ataaagctcg aaattccacg atgtaatcgg caaggttttc cggtggcaca
    16621 gcggtgtctt ctacaaaggc gatcggtttt gcccagcctt tggcattgcc tagcaggcct
    16681 acggcttttt tccgcattgc gtagattttc tcgatagaat ttacatcact cgtgagttgg
    16741 tagccgataa tcccggcttc attatttgcc attttttgat caaggctttg gcagagtgct
    16801 ttcacttggg tttcaatttg agtctgatcg cttgaggcat attcaacaat gttaatccct
    16861 aaaatcgggt tggctgggtc ttcggttaat aaatctgaca ccgaatgcca gacgatatct
    16921 tgcttggcaa gattgagcac tttggaatca accgtttcca ccgataaggc ttttgcctct
    16981 aacataaaag gagcggagcg taaggcggca tcaaaggaat tatatttaat attaattaag
    17041 gtgcgatatt tgggaatcgg cagtaaattc agtttggctt cgcaaataaa ggcaagcgaa
    17101 ccttcagaac cggttaaaat acgggtaagg ttaaattcgc tttcaccatg gttaaacaca
    17161 ttttttaaat catagccggt aataaaacgg ttaagctgag gcagttcgtt cagcactttg
    17221 gggcgtaatg ttttgcaacg gttgaaaatt tcacggtgca aggttttgcc gagagcggag
    17281 agatttaacc cttcaatatg tgcaaaaaaa tcggcagatt tgaccgcttg tgtctctaaa
    17341 atatcgccgt taataagcac agatttgatg gcaagaatat gatcagatgt tttgccatat
    17401 tgcaaagaac cttgcccaga ggcatcggtg ttgatcattc cgcctaaagt cgctcggtta
    17461 ctggtagaaa gttcggggga aaagaaaagt ccatgtggtt ttaaaaattg attgagctgg
    17521 tctttcacca cgccagcctg cactcgaacc caacgctctt ccacattcag ttccaaaatc
    17581 tgattcatat ggcgggagag atcaacaata atattattgt taagagattg cccgttagtg
    17641 cctgtgccac cgcctcgtgg agtaaaagtt aaatgttgat attctggctt ttgggcaagt
    17701 ttggttagaa ttacgacatc agaaacggat ttcggaaaca gaatagcttg cggaatttgc
    17761 tgatacacgc tgttgtctgt tgccagtgaa agcctatctg cataatttga tgcaatttcc
    17821 ccactaaaat gctgattgac gagttcagtt aaataggatt gggtggcttt atccagttgc
    17881 ggtacttcag agagtctagg tatcataagc tgtgtttggt tttttataat aaaagcacta
    17941 aattttgctt atcttagcaa tttttctaaa aattgggaat ggaatatcaa tttgattaaa
    18001 tagtgttcga aaaatggttt tttggttaaa atatagacaa attattacgt ttctatacat
    18061 ttcatcagga aaaaacgatt gatttttcga aaatgaaacc acataatgac aatattcttg
    18121 ctcaatctaa attagaacaa gaatgttatt cagaagat
//
LOCUS       DANLZQ010000041        17767 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.041, whole genome shotgun sequence.
ACCESSION   DANLZQ010000041 DANLZQ010000000
VERSION     DANLZQ010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 17767)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17767)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17767
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.041"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(115..1830)
                     /gene="proS"
                     /locus_tag="PXE50_001264"
     CDS             complement(115..1830)
                     /gene="proS"
                     /locus_tag="PXE50_001264"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HDL5622185.1"
                     /translation="MRTSQYLFSTLKEMPNDAQVVSHQLMLRAGMIRPMASGLYNWLP
                     TGIKVLKKVENIIREEMNKGGAIEVLMPVVQPAELWVESGRWNDYGPELLRFKDRGER
                     DFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDA
                     YSFHTTQESLQETYDVMYQVYSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGE
                     DDVVFSTESDFAANIELAEAVAVGERQAPTAEMQLVDTPNAKTINELVENHGLAIEKT
                     VKTLVVKGATEEQPLIALVIRGDHELNEIKAQKHPLVADPLEFADEAEIKAKIGAGVG
                     SLGVVNMPIPVIIDRSVALMSDFGCGANIDGKHYFNVNWERDVAVPEIADLRNVVEGD
                     PSPDGKGTLQIKRGIEVGHIFQLGKKYSEAMKATVQGEDGKPLVMTMGCYGIGVTRVV
                     AAAIEQHYDDRGIIWPCDEMAPFTVAIVPMNMHKSEKVQAFAEELYANLKAQGVEVIF
                     DDRKERPGVMFADMELIGVPHMVVIGEKNLENGEIEYKNRRSGEKQMIAKESLLAFLK
                     ANVKA"
     gene            complement(1994..2155)
                     /locus_tag="PXE50_001265"
     CDS             complement(1994..2155)
                     /locus_tag="PXE50_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622186.1"
                     /translation="MEQKLNNVFGGIMFKEKDYDEYLEAKVKKGQIFTLEQANAEWQE
                     IIEQIEREN"
     gene            complement(2208..4091)
                     /gene="htpG"
                     /locus_tag="PXE50_001266"
     CDS             complement(2208..4091)
                     /gene="htpG"
                     /locus_tag="PXE50_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HDL5622187.1"
                     /translation="MANNQETRGFQSEVKQLLQLMIHSLYSNKEIFLRELISNASDAA
                     DKLRFKALSEPALYEGDGELRVRVSVDETLGTITIADNGIGMTREQVIDHLGTIAKSG
                     TKEFLNALGTDQAKDSQLIGQFGVGFYSSFIVADKVTVKTRAAGVPAEQGVIWESAGE
                     GDYTVADLEKKERGTEIILHLREDEKEFLNEWRLREIIGKYSDHIGLAVEIQTNEYDD
                     EGKASGQKWEKINKAQALWTRSKNEISDEEYTEFYKHLSHDFADPLIWSHNKVEGKQE
                     YTSLLYVPSKAPWDLFQREQKHGLKLYVQRVFIMDDAEVFMPNYLRFMRGLLDTNDLP
                     LNVSREILQENKVTQSLRSALTKRALQLLEKLAKDDAEKYAQFWQAFGVVLKEGVGED
                     FANKQQVAGLLRFASTQRDDSEQAVSFADYIARMKEGQKAIYFLTADSYQAAKNSPHL
                     ELFHKKGIEVLLLSDRIDEWLVSHLTEFDGKPLQSITKSDLDLGELADKQEEESQKAQ
                     QAEFGSFLERAKGYFGERVKNVVLTHRLTDTPAVVSTDSDEMTTQMAKLFAAMGQQAP
                     EVKYTFELNPDHPMVKKVADLADEAEFADWIELLFEQALLAERGTLENPTAFIKRVNK
                     LLG"
     gene            4255..4542
                     /locus_tag="PXE50_001267"
     CDS             4255..4542
                     /locus_tag="PXE50_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system
                     prevent-host-death family antitoxin"
                     /protein_id="HDL5622188.1"
                     /translation="MAITITSREFNQNASKVLKMAEKEPVFITKWGKIVNVVSSYMDY
                     QQKKPSEPSFEELFASSENEDVSDEFWQEFEQTLVEIRKSNKPRPVDFGDE"
     gene            4542..4970
                     /locus_tag="PXE50_001268"
     CDS             4542..4970
                     /locus_tag="PXE50_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HDL5622189.1"
                     /translation="MYRYLFDTNIVSELYKLRNDKMDVNVRQWLRGVNPSQTNISCIT
                     LSEIKTGILLKARKDKEQSDRLNDWFENNVLKAYQTKAFVVNNDIALLASEYHIPNKM
                     DLNDAYIAATAKYHNLILVTRNTKDFIRCDVRLFNPFETA"
     gene            4974..7055
                     /gene="recG"
                     /locus_tag="PXE50_001269"
     CDS             4974..7055
                     /gene="recG"
                     /locus_tag="PXE50_001269"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HDL5622190.1"
                     /translation="MSEQLLDGVPLTALSGVGAAISEKLSRIGINNVQDLLFHLPMRY
                     EDRTRITPIADVRPESFATIEGYVQLTEVQFGKRPILSVTLSDSTSKIMLKFFNFNAG
                     MKNSLATGVRVKAFGEIKRGRFMAEIHHPEYQIIRDNQPLVLAETLTPIYSTTEGLKQ
                     ASLRKLTEQALALLEKVKVAELLPDEYNPHKYSLKEALQLLHRPPPTISAEVLEKGDH
                     PAQKRLIFEELLAHNLAMQQLRLGVKQQYAEALTYQTDIKQRFLDSLPFKPTHAQSRV
                     TADIEQDLAKPHPMMRLVQGDVGSGKTLVAALAALLAIDNGKQVALMAPTEILAEQHA
                     NNFANWLNPFGIEVGWLAGKVKGKARTAQLEAIKNGDVQMIIGTHALFQDNVEFHHLA
                     LVIIDEQHRFGVHQRLTLREKGAKENNYPHQLIMTATPIPRTLAMTVYADLDTSIIDE
                     LPPGRTPITTVVISEDRRAEIVQRVYQVCKQEHRQAYWVCTLIDESEVLEAQAAAAIA
                     EDLQRALPDLRIGLVHGRLKPQEKQAIMAEFKAANLDLLVATTVIEVGVDVPNASLMI
                     IENSERLGLAQLHQLRGRVGRGATASHCVLMYKPPLGKISSKRLQVMRDSQDGFYIAE
                     KDLEIRGTGEILGTKQTGMAEFKVADLMRDRKMIPLVQRYAKQIISENQPLAEALIKR
                     WLDNKAEYTNA"
     gene            complement(7077..8011)
                     /locus_tag="PXE50_001270"
                     /pseudo
     CDS             complement(7077..8011)
                     /locus_tag="PXE50_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250489.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
     gene            complement(8064..9716)
                     /locus_tag="PXE50_001271"
     CDS             complement(8064..9716)
                     /locus_tag="PXE50_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-sugar mutase"
                     /protein_id="HDL5622191.1"
                     /translation="MTIFQVAQNWLAQDPDAETRAELEQLIQAAESDEKAKAELTARF
                     DGRLQFGTAGLRGRLQAGSMGMNRVLVAQAASGLAGFIKGYDKEPSIVIGYDGRKNSD
                     VFARDTAEIMAAAGIKTYLLPRKLPTPVLAYAIQYFDTTAGVMVTASHNPPEDNGYKV
                     YLGKANGGGQIVSPADKEIAALIDKVAAGDIRDLPRSQDFTVLDDEVVNAYIEKTASL
                     AKRPKAEINYVYTAMHGVGYEVLSKTLEKAGLPQPYLVSEQIQPDGSFPTVNFPNPEE
                     KGALDLAIKLAKEKNAEFIIANDPDADRLAVAVPDAQGNWKPLHGNVIGCFLGWYLAK
                     QFHAQGKQGVLACSLVSSPALAEIAKKYGLSSEETLTGFKYIGKVENLLFGFEEALGY
                     LVDPDKVRDKDGISAAIMFLDLVCSLKQEGKTLADYTTEFVQEFGADVSGQISIRVCD
                     LAEIGKLMTALRNNPPSEIGGFKVAEFIDHTKTTRQNDILVFVLENGSRLIARPSGTE
                     PKIKFYLDARGTDAENAEQVLAQFDESVRSLLRQEEYGKQDC"
     gene            complement(9868..10929)
                     /locus_tag="PXE50_001272"
     CDS             complement(9868..10929)
                     /locus_tag="PXE50_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDL5622192.1"
                     /translation="MAIYAIWNNKGGVGKSYLTFQIACEYAKQYPAKKVLVVDLCPQA
                     NSSSMLLGGIEKGEQELAKIHSQVNKNTISGYISERLVSPYRSINSATKYVTQVSTIN
                     EYVPKNVYLVVGDEELEIQSSGILHASQAVHVPDSWRLVHLWVRDLVSDIQNAWDNDD
                     NVVFIDCNPSFTIYTELALAASDRLIIPFSADGSSKRAVKSVLSLVYGVKRHSGDVSS
                     HFYTESQKSKLALPQIYMYVGNRLTINAKASATAFKTVVEEIGDEIYNIWKTNANLFC
                     IHPAGVGTPTNKSSFRKMFQYEVRDANTASVVSGALGIPISRLSSGKRDVLGKNVMVN
                     QSQLDAQVPNIQNLVQCIE"
     gene            complement(11010..12242)
                     /locus_tag="PXE50_001273"
     CDS             complement(11010..12242)
                     /locus_tag="PXE50_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HDL5622193.1"
                     /translation="MEHYLDELIINSQRILLLQGPIGSFFTEFARWLESEQKEVFKLN
                     FNGGDEYFYPNNSPNTFPYYDSLDNFEAYLIQFCQTHQIDNILCFGDNRYYHKVAKNV
                     CLKLKLVFWAFEEGYFRPEYITLEKWGVNAFSPIPKNHTFFLPYAELPVVSEPEKVSK
                     GFRCMAGKAIPYYWNAYKKRKAYAKYQHHRFLNLKYYLNLWTRSGIKRICYWLHDKGF
                     AKRVEKGEFGEFFIVPLQVYDDTQVRIHSEQKSVERFLREVLNSFAKFAPAHLNLIIK
                     HHPMDRGFIDYKMVIYEFLEQYPQLNGRVFYIHDVPLPVFLRYGKGMVTLNSTSGLSA
                     LLHNMPVKTLGRANYDFEGLTDKQPLDTFWANPQPPNSEVFKGYRQFHLHKTHINGNF
                     YHKSILRYPYNWENEAHR"
     gene            complement(12265..14355)
                     /locus_tag="PXE50_001274"
     CDS             complement(12265..14355)
                     /locus_tag="PXE50_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein"
                     /protein_id="HDL5622194.1"
                     /translation="MLSYLVFFSKIIKIPNLKGFLPHCEIRRRPLVGKTFIAQKRPNQ
                     IIGWGLRPSAVGARAYAQKHQLPYIALEDGFLRSLGLGVKGYPPFSLVYDDIGIYYDT
                     TCPSRLEKLLLEKPLQDQEQIKLAERALSQILTYGLSKYNHALDFSEIPSAKEKIVLV
                     IDQTFGDMAVKYGQASEVDFNKMLETAISENPEAQIWVKTHPDVLSGKKKGYLTDLPQ
                     YTDRVRIITEDVNPASLIKLCEKVYCVTSQMGFEALLLGKKVVTFGVPWFAGWGVTDD
                     RNEAVQLLVQQNRRKDRSLLQLFYAAYFDYSRYINPNTGEKGSIFDVIEYLHKATILN
                     RRLSGNVYCIGMSLWKQAVIKPFFNLPQCRLHFVRSLNSLKKRPLADNAKILVWSNGK
                     ADVLQFAQQNNIPLLRMEDGFIRSVGLGANLVAPLSLVVDDLGIYFNAENTSRLEQIL
                     LSAEHFSETDLSYAETLRQKLVASHIGKYNVGGGDVKFNAQGKKIILVPGQVEDDASI
                     KSGSPQIKRNLDLLKKVRELNPSAYIIYKPHPDVVSGNRVGQIPTAETRRFADQMVDN
                     ANILDCILIADEVHTMTSLAGFEALLRGKKVHCYGLPFYAGWGLTEDRLKSARRGKSL
                     TLSQLIAATLIYYPLYVDPISRQFIDANQAIHILSQQKRNLTNQRIKRSWVSKQYGKL
                     QHLYRAFKYASHTK"
     gene            14588..15700
                     /gene="wecB"
                     /locus_tag="PXE50_001275"
     CDS             14588..15700
                     /gene="wecB"
                     /locus_tag="PXE50_001275"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HDL5622195.1"
                     /translation="MRYLIVFGTRPEAIKMAPLVEGFKKNGLNFKVCVTAQHRQMLDQ
                     VLELFEITPDYDLDIMSNKQTLSTVTSAILEKIQPVIAEYKPTTIFVHGDTATTLATS
                     LAAYYNQIDIAHIEAGLRTHNIYSPWPEEGNRKLTGALAKYHFAPTQSTKKNLLNENI
                     TEDTIYVTGNTVIDALFFACKKLDENVDLLSSLQEKFSYIKSKRTILITGHRRENFGN
                     GFENICKAVSTLASDFPDVQFIYPVHLNPNVREPVNRLLADKSNVHLIEPCDYLSFVY
                     LMRESYLILTDSGGIQEEAPSLGKPVLVMRDTTERPEAVEAGTVKLVGTAQSEIIKQV
                     TELLNDQAAYTKMSEAHNPYGDGTAVKQILSVFQSK"
     gene            15715..16980
                     /gene="wecC"
                     /locus_tag="PXE50_001276"
     CDS             15715..16980
                     /gene="wecC"
                     /locus_tag="PXE50_001276"
                     /EC_number="1.1.1.336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetyl-D-mannosamine dehydrogenase"
                     /protein_id="HDL5622196.1"
                     /translation="MSNFNTISVVGLGYIGLPTATVFAQHGLNVIGVDVNQLAVDTIN
                     QGKIHIVEPDLDVAVHQCVSSGKLKATLTPEPAEAFLIAVPTPFKGEDYEPDLSYIQA
                     ACKAIAPVLEKDNLVILESTSPVGATEQMAEWLAEYRPELSFPQQAGEDSDIRIAHCP
                     ERVLPGQVIRELIENDRIVGGMTNKCSKQAVDLYKTFVKGDCIVTNARTAEMCKLTEN
                     SFRDVNIAFANELSIICDRLDINVWELIALANRHPRVNILQPGCGVGGHCIAVDPWFI
                     VNKTPDLAKIIRTAREVNDYKPEWVISKVNEAVIEALQKTGKSIDQIKIACLGLAFKP
                     DIDDLRESPALKITEKLAEKYVGQILAVEPNVEELPKKLAKKNISLVTVDEALKLADV
                     VVVLVDHREFRELAAIPSHITVIDTKGIY"
     gene            16994..>17767
                     /locus_tag="PXE50_001277"
     CDS             16994..>17767
                     /locus_tag="PXE50_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622197.1"
                     /translation="MKILIFGSCVTRDAFTFDKNNLFTLVRYFARSSLATAFDSLKVE
                     DKYTKKLKSAFQQKIVGADLSKEFRNYVTQQDFDYLVIDFINDRYDIFQFNNKSKVLL
                     TAELKQTDFLKRNQSKGIVIEGGSDEWFDEWKKGCIEFIELAKNQDFLHKIILNKVMW
                     TNQLANGEKFIEDDKIEKANTFLERQYEFISKFIPQENIITYSSELFKANKDYMLEQL
                     SIPTLRKDSNKLINKEQIDDSSRDYLDYIKHRIDELYNLN"
BASE COUNT         5245 a         3865 c         3404 g         5253 t
ORIGIN      
        1 cacgcattct atttcctata ttctaaaaat aatagagtat tttatacttt agttaaatac
       61 tcgctgcttt atattaaagg gcgtatttta tacgcccaat tttgttattt ataattaagc
      121 ctttacattc gcttttaaga acgcaagtaa gctctctttg gcgatcatct gtttttcacc
      181 gctgcggcgg tttttgtatt cgatttcgcc gttctcgagg tttttctcac caataaccac
      241 catatgcggc acaccgataa gctccatatc cgcgaacatc acgcccgggc gttctttacg
      301 atcatcaaaa atcacctcaa cgccttgagc ttttaagtta gcgtataact cttcagcgaa
      361 tgcctgcact ttttccgatt tgtgcatatt catcggcaca atcgccaccg taaatggcgc
      421 catttcatca caaggccaga taataccacg atcatcataa tgttgttcaa tcgcagctgc
      481 caccacacgg gtaacgccga taccgtaaca acccattgtc atcactagcg gtttaccgtc
      541 ttcaccttgc acagtggctt tcattgcttc tgagtatttt ttgcctaatt ggaaaatatg
      601 ccctacttca atacctcgtt tgatttgaag tgtgccttta ccgtccgggc ttgggtcgcc
      661 ttccaccaca ttgcgtaaat ctgcaatttc cggcacagca acatcacgct cccagttcac
      721 gttaaagtag tgtttgccat caatattcgc accgcagcca aaatctgaca tcaacgccac
      781 tgagcggtca ataatcaccg gaatcggcat attcaccaca cctaacgagc caacaccggc
      841 accgattttg gctttaattt ccgcttcatc ggcaaactca agcggatcag ccaccaacgg
      901 gtgtttttga gctttaattt cgtttaactc gtggtcgcca cgaatcacta acgcaattaa
      961 cggttgctct tcagttgccc ctttcaccac taaggttttc accgtttttt caatggctaa
     1021 accgtgattt tctactaatt cattgatggt tttcgcattt ggcgtatcca ctaattgcat
     1081 ttctgccgtt ggtgcttggc gttcacccac cgcaaccgct tcggctaatt caatattggc
     1141 agcaaaatct gattcggttg aaaataccac atcatcttca ccgcttgagg ctaacacttg
     1201 gaactcgtga gaggctgaac cgccgataga gccggtatct gcctgcaccg cacggaaatc
     1261 taagcccaaa cgggtgaaaa tattgctgta aacctgatac atcacatcat aggtttcttg
     1321 caggctctct tgtgtggtgt ggaaagaata ggcatctttc atcacaaatt cacgcgaacg
     1381 cattaccccg aaacgagggc ggacttcatc acggaatttc gtttgaattt ggtataaatt
     1441 cagcggaagt tgtttgtacg aagaaacttc acggcgaacc aagtcggtaa tcacttcttc
     1501 gtgagtcggg ccaagcacga aatcacgctc gccacgatct ttaaaacgta ataattccgg
     1561 gccgtaatca ttccaacgac cggattccac ccataattcc gccggctgaa ccaccggcat
     1621 taatacctcg atagccccgc ctttgttcat ctcttcacga ataatatttt ccactttttt
     1681 caacactttg atcccggtcg gcaaccagtt gtataaacct gacgccatcg ggcgaatcat
     1741 tccggcacgc aacattaatt gatggctaac tacttgtgca tcattcggca tttctttaag
     1801 ggttgaaaat aaatattgac ttgtacgcat tgctattcct attcttttta aactttgaaa
     1861 cctgaaaaaa tctgcttatt ttaaaacaaa gcggttaaat tttcaggaaa ttttgcaaaa
     1921 tcctataaaa aaataaccgc ttgtaagcgg ttattttgtt ttaactaagg gtattttctt
     1981 aaactgtgta tgcttaattt tctcgttcaa tttgctcaat aatctcttgc cattcggcat
     2041 ttgcttgttc aagagtaaaa atctgacctt tttttacttt agcctctaaa tattcatcat
     2101 aatctttttc tttaaacatt attcccccga atacattgtt taatttttgt tccattatat
     2161 attgaatatg gaaaaacgga aacctagatt tccgttttta gtaatggcta gcccaacaat
     2221 ttatttaccc gtttaataaa ggctgtcggg ttttccaacg tgcctcgttc agcaagcaga
     2281 gcttgttcaa acagcagttc aatccaatcg gcgaactcgg cttcatcggc aagatcagct
     2341 acttttttca ccattgggtg atctgggttc agctcaaaag tatatttcac ttctggtgct
     2401 tgttgcccca ttgctgcaaa cagttttgcc atttgggtgg tcatttcatc gctgtcagtg
     2461 gaaaccactg ccggtgtgtc ggttaagcgg tgagtcagca ccacgttttt gacccgttca
     2521 ccaaagtagc ctttcgcccg ttctaagaac gaaccaaact ccgcctgttg ggctttttgg
     2581 ctctcttctt cctgcttgtc ggcaagctcg cctaagtcta agtccgactt ggtaatgctt
     2641 tgtagcggtt tgccgtcaaa ctcggtgagg tggctaacca accattcatc aatgcggtca
     2701 gaaagcagta gcacctcaat gccttttttg tggaacagct ctaagtgcgg gctgttttta
     2761 gccgcttggt agctgtctgc ggttaagaag tagatcgctt tctgcccctc tttcattctt
     2821 gcaatataat cggcaaaact gaccgcttgt tcgctgtcat cacgctgggt ggaggcaaaa
     2881 cggagtaagc ctgcaacctg ttgtttgttg gcaaagtctt cgcccacgcc ctctttaagc
     2941 accacgccga acgcttgcca gaattgggca tatttttcgg catcgtcttt cgccaatttt
     3001 tccagcagtt gtaacgcacg cttggttaag gcagaacgga gcgattgggt aactttattc
     3061 tcttgcagaa tttcacggct gacgttgagc ggcaggtcgt tggtgtcgag caagccacgc
     3121 ataaaacgca agtagttcgg cataaagact tccgcatcgt ccataataaa tacacgctga
     3181 acgtagagtt tcaagccgtg tttttgctcg cgttggaaca gatcccacgg ggctttgctc
     3241 ggcacataca gcaagctggt gtattcttgc ttaccttcga ctttattgtg cgaccaaatc
     3301 agcgggtcgg caaaatcatg gctgaggtgt ttgtaaaatt cggtgtactc ctcgtcacta
     3361 atctcatttt ttgagcgtgt ccaaagcgct tgagctttgt taattttttc ccatttttga
     3421 ccgcttgctt tgccctcgtc atcgtattca ttggtctgaa tttccaccgc caggccgata
     3481 tggtcggagt atttgccgat aatctcacgc aaacgccatt cgtttaaaaa ctctttttcg
     3541 tcctcacgca agtgaagaat gatttccgtg ccacgctctt ttttctccag atcggcaacg
     3601 gtgtaatcgc cctcaccggc agattcccaa atcacgcctt gctcggcagg cactccggcg
     3661 gcacgggttt tgactgtcac tttatccgcc acgatgaaag aagagtaaaa gcccacgccg
     3721 aactgcccga taagctggct gtctttggct tgatcagtgc cgagtgcgtt caaaaattct
     3781 ttggtaccag attttgcaat cgtaccgaga tggtcgatca cctgctcacg ggtcataccg
     3841 ataccgttat cggcaatcgt aatcgtaccg agtgtttcat caacagagac acgcacacgc
     3901 agttcgccat caccttcata caaagccggc tcggaaaggg ctttaaaccg caatttatcg
     3961 gcggcgtcag aggcgttgga aataagctca cgcaggaaaa tttctttgtt ggagtaaagc
     4021 gagtggatca tcagttgcaa taactgtttc acttccgact ggaagccacg ggtttcttga
     4081 ttatttgcca ttgtgtattc ctttattcat taaaaaacag ggaatagatg gggcaagtgg
     4141 tcagattttc aagatttttt gcaaaatatc tgttgccaaa tagcgaatta attgaaagat
     4201 attactacat ttaataaaat acactcatct ttttactaca ttttggagag cgatatggca
     4261 ataaccatta cttccagaga atttaatcaa aatgccagca aagtgttaaa aatggcagaa
     4321 aaagagccgg tttttattac caaatggggc aaaatcgtca atgtggtgtc tagttatatg
     4381 gattatcagc agaaaaagcc tagcgagcca agctttgaag agctattcgc ctcttccgaa
     4441 aatgaggatg tgagcgatga attttggcaa gagtttgaac aaacattggt tgaaatccgc
     4501 aaaagcaata aaccaagacc tgttgatttt ggagatgagt aatgtatcgc tacctttttg
     4561 ataccaatat agtttccgag ctttataagt taagaaatga caagatggat gtcaatgttc
     4621 gccagtggct gagaggggtt aatcctagcc agaccaatat cagctgtatt acgttatctg
     4681 aaatcaaaac aggtattttg ctgaaagccc gcaaagacaa agaacaatca gaccgattaa
     4741 atgattggtt tgaaaataat gtattaaagg cttatcaaac aaaagcgttt gtggtgaata
     4801 acgacattgc tctattggca tcagagtacc atattcccaa taaaatggat ttaaatgatg
     4861 cttatattgc ggcaaccgcc aaataccaca atctgatttt agtcacccgc aacaccaaag
     4921 attttatccg ttgtgatgtg cgtttattta acccatttga aaccgcataa ataatgagtg
     4981 aacaattatt agacggcgtg ccattaaccg ccctttccgg cgtaggagcg gcaatttccg
     5041 aaaagttaag tcgaatcggc attaataatg tgcaggattt actgtttcat ctgccaatgc
     5101 ggtatgaaga tcgcacccgt attaccccga ttgctgatgt tcgcccggaa agctttgcca
     5161 ccattgaagg ctatgtacaa cttaccgaag tccagtttgg taaacgcccg attttatcgg
     5221 ttacactctc cgacagcacc agcaaaatta tgcttaaatt cttcaatttc aatgctggaa
     5281 tgaaaaatag ccttgccacc ggcgttcggg taaaagcctt tggggaaatt aagcgtgggc
     5341 gatttatggc ggaaattcac caccctgaat atcaaattat tcgggataat caaccgcttg
     5401 tactggctga aaccctgacc ccgatttact ccaccactga ggggttaaaa caagcctcgc
     5461 tgcggaaatt aaccgagcaa gccctcgctt tattagagaa agtgaaagtc gccgagctgt
     5521 tgcctgatga atacaatccg cacaaataca gcctaaaaga agcgttgcag ttattgcacc
     5581 gcccaccgcc gacgatttct gccgaagtct tggaaaaagg tgaccaccct gctcaaaaac
     5641 ggctgatttt tgaagaactg ctggcacaca atttagcgat gcagcaactc cgtttagggg
     5701 taaaacagca atatgcagag gcacttactt accaaaccga tataaaacag cgttttctcg
     5761 acagtttgcc ttttaagcct actcacgcac aaagccgagt aaccgcagat attgagcaag
     5821 atcttgccaa accacacccg atgatgcgac tggtacaagg cgatgttggt tcaggtaaaa
     5881 ccttagtagc cgccttggca gcactattag cgattgataa cggcaagcag gtggcattaa
     5941 tggcaccgac cgaaattctt gccgaacagc acgccaataa ttttgccaac tggcttaatc
     6001 cctttgggat tgaggttggc tggcttgccg gtaaagtgaa aggcaaggcg agaaccgcac
     6061 aacttgaggc aatcaaaaac ggtgatgtgc agatgattat cggcactcac gccctgttcc
     6121 aagacaatgt ggaatttcac catttagcgt tggtgattat tgatgaacaa caccgttttg
     6181 gcgtacacca acggctgacc ttgcgggaaa aaggagcgaa agaaaataac tatccgcatc
     6241 agctcattat gacggcgacc cccattccga gaacgctggc aatgacggtc tatgctgacc
     6301 tcgacacctc aatcattgac gaactgccac cgggtagaac gccaatcacg actgtggtga
     6361 tttctgaaga tcggcgagca gaaatcgtcc aacgggtgta ccaagtctgt aagcaagaac
     6421 accgccaagc ctattgggtc tgcaccctga ttgatgaaag cgaagtgttg gaggctcaag
     6481 ccgcggcagc gattgccgaa gatttacagc gagccttgcc ggatttacgc atcgggttag
     6541 tacacggacg gctgaaacca caggaaaaac aagcgattat ggcggaattt aaggcagcga
     6601 atttagattt gctggttgcg accaccgtaa ttgaagtggg agtggacgtg ccgaatgcta
     6661 gcctaatgat tatcgaaaat tccgaacgac tcgggctggc tcaactccac cagttgcgtg
     6721 gacgtgttgg gcgaggggca accgcctcgc attgcgtctt aatgtacaaa ccgccgctcg
     6781 ggaaaatttc cagcaagcgg ttacaagtga tgcgtgatag ccaagacggt ttctacattg
     6841 ccgaaaaaga tttggagatt cgaggcacag gcgaaattct cggcacaaaa cagaccggaa
     6901 tggcagaatt taaggtggcg gatttaatgc gagaccgcaa aatgattccg ctggtgcaac
     6961 gttacgccaa gcaaattatt agcgaaaatc aaccgcttgc agaggcgtta attaagcgtt
     7021 ggttagacaa caaggcggaa tataccaacg cttaaccggc aagcgggtta tttagattac
     7081 ggcaggtttt tcaccgattc aattaccaaa tcccaaaagc gggatttgtc taattttttt
     7141 gctacccaag tattacactg ttttggcggg tagcggaaat ccgccaccgt catacccagt
     7201 gtatgcgtgc ctgttagctc aatattgacc ggcacttgct gaacttcaat caggcttggg
     7261 tcaatcacat acgccaccgc acaggcatcg tgaaccggtg gagcatcaaa gccttgagcc
     7321 tgtttataca ttttggcgaa gaacgccagc aattccacca caaactgccc cgatttgctg
     7381 tttaatgcct taaagcgttc aaccacatcg ggggtcgcaa gtgcttggtg agttaagtct
     7441 aagccgacca tcgtcacctt ccaaccggca ttaaacacaa tatgagcagc ttccgggtca
     7501 attttaatat taaattctgc caccgcactc cagttgccgg tgtgataacc tccgcccatc
     7561 agcaccactt ctttcactct ttcaataata cggggctcaa ggcgggcagc tagagcaata
     7621 ttggttattg cccaccggtc ggcactaagg taatgctttt ctccgggtgc gacattatca
     7681 aatcaataat taattgagcg gcgtgttttt tctcaaattg tcgggtagat tcagggagta
     7741 caggcccatc cattcccgaa tcaccgtgaa tatccggggc attttccact tcacgcacca
     7801 gcggtctggc acaacctttg gcaaaaggaa cgttgcaaat atgagcaatt tccgcaaccg
     7861 ccaacgcatt acgcgatact ttttctaagg tttgattacc taccaccgta gtcactgcca
     7921 acaaatcaat attcggattc ccccaagcga gcatcatcgc aatcgcatcg tcatgccccg
     7981 gatcacaatc taaaataatt ttttgagcca ttattgtctc ctttaaaaaa gggagagcct
     8041 aagctccccc tcaattaatg ccattagcaa tcttgtttgc cgtattcttc ttggcgaagc
     8101 agcgaacgca cactttcgtc aaactgagcc agcacttgct ctgcgttttc agcgtctgtg
     8161 ccacgagcat ctaaatagaa tttaattttc ggctcagtac ctgaagggcg agcaatcaaa
     8221 cggctgccat tttccaacac aaacactaaa atgtcatttt ggcgtgtggt tttggtatgg
     8281 tcaataaact cagccacttt aaagccacca atttcgcttg gaggattgtt gcgtaacgcc
     8341 gtcattaatt tgccgatttc ggctaaatca caaactctga tcgaaatttg accgcttaca
     8401 tcagccccga actcttgtac aaactcggtg gtgtaatccg caagggtttt accttcttgt
     8461 ttgaggctgc acactaaatc taagaacata atggcagcgg aaatgccgtc tttatcacgc
     8521 actttgtctg ggtcaaccaa ataacctaag gcttcttcaa agccaaataa taggttttca
     8581 acttttccga tatatttaaa gccggttaag gtttcttccg agcttaaacc atattttttc
     8641 gcaatttcag ctaacgccgg agaggatact aacgagcaag ccaacacgcc ttgtttacct
     8701 tgtgcgtgga attgtttggc taaataccag cctaagaaac agccgatcac attgccatgc
     8761 agtggtttcc agttgccttg agcatcaggc acggctaccg ctaaacggtc agcatccggg
     8821 tcgttggcga taataaattc ggcatttttc tctttcgcca atttaatcgc taaatctaac
     8881 gcccctttct cttccgggtt cgggaaatta accgttggga acgaaccgtc cggctgaatc
     8941 tgctcactaa ctaaatacgg ttgcggtaag ccggcttttt ctaatgtttt gcttaacact
     9001 tcatagccca caccgtgcat tgcagtgtaa acgtagttta tttcggcttt tggccgtttg
     9061 gctagtgagg cggttttctc aatataagca tttaccactt catcgtctaa caccgtgaaa
     9121 tcttggctac gaggtaaatc acgaatatcg cctgctgcta ctttatcaat cagagcagca
     9181 atttctttat ctgccggcga aacaatttgt ccgccaccgt tggctttacc taaataaact
     9241 ttatagccgt tatcttccgg tgggttgtgg ctggcagtta ccatcacacc ggctgtggta
     9301 tcaaaatatt gaatcgcata ggcaagcact ggtgttggca atttgcgagg aagcaggtac
     9361 gttttaatgc ctgccgctgc cataatttca gcggtgtcac gggcaaacac atcggaattt
     9421 ttacgaccgt cataaccaat aacaattgac ggctctttat cataaccttt aataaaccca
     9481 gctaaaccgc tggcagcttg tgccaccaaa acacggttca tacccattga acccgcttgt
     9541 aagcgaccac gcaaaccagc cgtaccaaac tgtaaacgtc cgtcaaaacg ggctgttaat
     9601 tctgcttttg ctttctcgtc cgattctgcc gcttgaatta actgctctaa ttccgcacgg
     9661 gtctctgcat ccgggtcttg ggctaaccaa ttttgtgcaa cttggaaaat agtcattttt
     9721 tactcctatg taatttaaaa actctgttta gattagccca aagtcctttt atttaaaagg
     9781 agatatttct ttttttgtga tcgagctatc aaataaaaag atttgtcaga aataaaaaat
     9841 agcgtactta atatacgcta tttttcttta ttctatacac tgaacaagat tttgaatgtt
     9901 aggaacttga gcatctaatt gtgactgatt caccattaca tttttaccta aaacatctct
     9961 ttttcctgat gataagcgac taattggaat acctaaagca cctgaaacaa cagatgctgt
    10021 atttgcatct ctcacctcat actgaaacat ttttctgaag cttgatttat ttgtaggagt
    10081 accaacacct gctgggtgaa tacagaacaa attagcatta gttttccata tattatagat
    10141 ttcatcacct atttcctcta caactgtttt aaatgcggtt gctgatgctt tggcatttat
    10201 cgttaatcta ttacctacat acatataaat ttgaggtaat gctaacttac tcttttgaga
    10261 ttctgtataa aaatgagagc tgacatcccc agagtgcctt ttaaccccat atactagaga
    10321 taatacagac ttaacagctc gttttgatga accatcagcg gaaaaaggga tgatcaatct
    10381 atctgaagca gccaacgcta attcagtata aatagtgaaa cttggattgc aatcaataaa
    10441 tacaacgtta tcatcattat cccaagcgtt ctgtatatca gaaactaaat cacgcaccca
    10501 aagatgcact agccgccaag aatcaggaac atgaacagct tgggaagcat gtaaaatacc
    10561 agatgattgg atttctaatt cctcatcacc aacaacaaga taaacatttt ttggtacata
    10621 ttcatttata gtgctaactt gagttacata tttcgttgca ctattaatag aacggtaagg
    10681 acttactaat ctttctgaaa tatatcctga aatagtattc ttgtttactt gagaatgaat
    10741 ttttgctaac tcttgctcac ctttttcaat gccgcctaat agcatagatg atgaatttgc
    10801 ttgaggacat aaatcaacaa cgagaacttt ttttgctggg tattgttttg catactcaca
    10861 agcgatttga aaagttaaat aacttttacc aaccccacct ttattattcc atattgcata
    10921 aatagccata atgccccctc ttttaacaat aggtgtaata ataacacaat aatttagcta
    10981 taagatatta cttattttaa tattttccat cacctgtgtg cttcattttc ccaattataa
    11041 ggataacgca aaatcgattt atggtaaaaa ttaccgttaa tatgcgtttt atgtaaatga
    11101 aattgtctgt agcctttaaa tacttccgaa ttaggtggct gaggattagc ccaaaaagta
    11161 tctaatggct gtttatcggt taatccctca aaatcataat tggctctacc taaggttttg
    11221 accggcatat tatggagcaa tgcagaaagc ccactggttg aatttaaagt caccattcct
    11281 ttcccataac gtaaaaagac aggtaacggc acatcgtgaa tataaaaaac tctaccgttt
    11341 aattggggat attgctctaa gaattcataa atcaccattt tataatctat aaatcctcta
    11401 tccatcgggt gatgcttaat aattaaattg agatgtgccg gtgcaaattt ggcaaaggaa
    11461 ttcagaactt cccttaaaaa acgctctaca cttttttgtt cactatgaat cctcacttga
    11521 gtgtcatcat aaacttgtag aggcacaatg aaaaattcac caaactctcc tttttctacc
    11581 cgcttggcaa agcctttatc atgtaaccaa taacatattc gcttaattcc cgaccttgtc
    11641 cataaattaa ggtagtattt gagattcaga aaacgatgat gctgatattt tgcgtatgct
    11701 ttacgttttt tataggcatt ccaatagtac gggattgctt ttcccgccat acatctaaag
    11761 cctttagata ctttttctgg ttcactgact actggtaact cggcataagg caaaaagaaa
    11821 gtgtgatttt tagggattgg agaaaaagca tttacacccc atttttccaa cgtaatatat
    11881 tctggcctaa agtacccttc ttcaaacgcc caaaagacca actttaactt caagcaaacg
    11941 tttttagcca ctttatgata ataacgatta tcgccaaaac ataagatatt atctatttga
    12001 tgagtttggc aaaactgaat taaataggct tcaaaattat ctaagctatc atagtaagga
    12061 aaagtattcg ggctattatt tggatagaaa tattcatctc cgccattaaa atttaacttg
    12121 aagacctctt tttgctcact ttctaaccaa cgggcaaact cagtgaaaaa agagcctatc
    12181 gggccttgta acaataaaat tctctggcta ttgatgatta gctcatctaa ataatgttcc
    12241 atcttaattt cctaccctct acgcttattt agtgtgggaa gcatatttaa acgcacgata
    12301 aagatgctgt aattttccat attgtttact cacccaagaa cgtttaatcc tttgattggt
    12361 taggtttcgt ttctgttgtg acaatatatg aatcgcttga ttggcatcaa taaactgcct
    12421 gcttatagga tcaacataca gagggtaata tatcaatgtt gcggcaatta actgagataa
    12481 tgtcaaagat ttacctctgc gtgccgactt caatctatct tccgtcaatc cccaaccagc
    12541 ataaaaaggt aatccgtagc aatgcacttt tttacctctt aataatgctt cgaaaccggc
    12601 taaagatgtc attgtatgca cttcatctgc aattaaaata caatctaaaa tattggcatt
    12661 atccaccatc tgatccgcaa acctgcgtgt ttctgccgta ggaatctgac cgactcgatt
    12721 accacttacc acatcagggt gaggcttata aataatatag gcactagggt ttaattccct
    12781 cacttttttc agtaaatcca gatttctttt aatttgtgga gaacctgatt tgatcgaagc
    12841 gtcatcttct acctgccccg gtacaagaat tattttttta ccttgagcat taaattttac
    12901 atcgccaccg cccacattat attttccaat atggctagcc accaatttct gccttaatgt
    12961 ttcagcataa gacaaatcag tttcagaaaa atgctctgca ctcaataaaa tttgttctaa
    13021 tcgtgaagtg ttctctgcat taaaataaat gcctaaatca tcgactacta aagaaagcgg
    13081 tgcaactaaa ttagcgccta gtccgacaga gcgaatgaat ccatcttcca ttcttaacaa
    13141 tggaatatta ttctgctgtg caaattgcaa gacatccgct ttgccattgc tccaaactaa
    13201 aatttttgca ttatctgcaa gcggtcgttt ttttaaagaa tttagcgaac gcacaaaatg
    13261 taaacggcat tgaggcaaat taaaaaacgg cttaatgaca gcctgtttcc ataatgacat
    13321 acctatacaa tatacatttc cgcttaaacg ccggttgagt attgtcgcct tgtgcagata
    13381 ctcaatcaca tcaaaaatag agcctttttc acccgtattc ggattaatat aacgactgta
    13441 atcaaaatac gcagcataaa aaagttgcag taatgaacga tctttccgtc tattttgttg
    13501 aactaatagt tgaaccgctt cgttacgatc atctgttacc ccccaaccgg caaaccacgg
    13561 tacaccaaag gtaaccactt ttttacctaa taataatgcc tcaaacccca tttgcgaagt
    13621 tacgcaatag actttctcac acaatttaat caaacttgcc ggattcacat cttcagtaat
    13681 aattctgacc ctatcagtat attgaggtaa atcggtcaaa tagcctttct tcttgccact
    13741 taatacatcg gggtgagttt ttacccaaat ttgagcctct ggattctcac tgattgccgt
    13801 ttccaacatt ttattgaaat ccacttcact cgcttgacca tatttcaccg ccatatcacc
    13861 aaaggtttgg tcaataacta acacgatttt ttctttggca gaggggattt cactaaaatc
    13921 tagtgcgtga ttatatttag aaagtccgta agttaagatt tgagataatg ctctctctgc
    13981 aagcttgatt tgctcttgat cctgtaaagg tttttcaagc aataactttt ctaaacgaga
    14041 aggacaggtg gtatcgtaat aaatacctat atcatcataa actaaagaaa atggcggata
    14101 gccttttaca cccagcccta gtgagcgtaa aaagccgtct tctaatgcaa tatagggaag
    14161 ttgatgtttt tgtgcataag ctcttgctcc caccgctgaa ggacgaagcc cccagccgat
    14221 gatttggttc ggtctttttt gagcaataaa ggtttttccc acaagaggtc ttcgcctaat
    14281 ttcacaatga ggtaaaaaac cttttaaatt agggattttt ataattttac taaaaaacac
    14341 taaatagcta agcataaaaa attaatctca tattcgtatt tatgtattgt accatagcag
    14401 ataacatgat aatttctaac ctaccggata cttacaagaa tttacataaa atatctacaa
    14461 agtaaaagtt tttatacacc taactccata aaaacattat aatgaacacg atctttataa
    14521 ctaatttaac aaaattactt acatctagtg tattttagtt ttatctatat ttttaaagga
    14581 gtaataaatg cgctatctca tcgtcttcgg tactcgtcct gaggcaatca aaatggctcc
    14641 cttagtcgag ggctttaaga aaaacggtct aaattttaaa gtctgtgtta ctgctcagca
    14701 ccgccaaatg ctggaccaag ttttagaatt attcgaaatt actccagatt atgacctgga
    14761 tattatgagc aataagcaaa cactttctac tgtaacttct gctattttag aaaaaattca
    14821 acctgttatt gccgaataca aaccaactac tatttttgtt catggcgata ctgcaacaac
    14881 ccttgccact tcactggctg catactacaa ccaaattgat atcgctcata ttgaggcggg
    14941 tttaagaacg cataatatct actccccttg gccagaagaa ggtaatcgca agctaacagg
    15001 ggctttggca aaataccatt ttgcaccaac acaaagcacc aagaaaaatc tactcaacga
    15061 aaatattact gaggacacca tttatgtaac gggtaatact gtaattgatg ccttattctt
    15121 cgcttgtaaa aaattagatg aaaatgttga tttattaagt tcactccaag agaaattttc
    15181 ttacataaaa agtaagcgta ctattttgat tactggacat cgccgcgaaa attttggtaa
    15241 tggttttgag aacatctgta aagccgtttc aacattagcg tctgatttcc ctgacgttca
    15301 atttatctac cctgtgcatc tcaacccaaa tgtaagagaa ccggtaaatc gcctattagc
    15361 ggataaatcc aatgtgcatc tcattgagcc ttgcgactat ctctcctttg tttatttaat
    15421 gagagagtct taccttatct taactgactc cggaggtatt caagaagaag ccccatcatt
    15481 aggaaaaccg gtattagtaa tgagagacac aacagaaaga ccggaagctg tagaagccgg
    15541 aacagtaaaa cttgttggaa ctgcacaatc tgaaattatt aaacaagtta ctgagttact
    15601 caatgatcaa gctgcttata caaaaatgtc tgaggctcac aacccttatg gcgatggcac
    15661 agctgtgaaa caaattctct cagtatttca atcaaaataa taaggaataa atgtatgtcg
    15721 aactttaata ccatttcagt agtaggctta ggctatattg gcttgccaac cgccactgta
    15781 tttgcccaac acggtctaaa tgtaattggc gtagatgtta atcagctcgc cgtagacact
    15841 atcaatcaag ggaaaattca cattgtcgag cctgatttag atgttgctgt tcaccaatgt
    15901 gtatctagcg gaaaattaaa agccacactg acacctgaac cagcagaagc atttttaatt
    15961 gctgtaccaa cgccttttaa aggcgaggat tatgagcctg atttaagtta tattcaagct
    16021 gcttgtaaag ctattgcacc tgtgctggaa aaagataatt tagtcatttt agaatccacc
    16081 tctccggttg gcgcaacaga acagatggct gagtggcttg ccgagtaccg tccagagcta
    16141 agcttccctc agcaagcagg tgaagattct gatattcgta tcgcccattg cccagaacga
    16201 gtgctaccag ggcaagtgat acgtgaattg attgaaaatg accgtattgt gggtggtatg
    16261 acaaataaat gctctaaaca agcggtcgat ttatacaaaa cttttgtaaa aggcgattgt
    16321 atagttacca atgctcgtac cgcagaaatg tgcaaattga ccgaaaatag tttccgtgat
    16381 gtcaatattg cttttgcaaa tgagctttct attatttgtg atcgcctgga tattaatgta
    16441 tgggaactaa ttgctttggc taacagacac ccacgagtca atatcttaca accgggttgt
    16501 ggtgtgggtg gacactgcat tgctgtagat ccttggttta ttgtgaataa aactcctgac
    16561 ttggcaaaaa ttattcgtac tgctcgtgaa gtaaatgact ataaacctga atgggttatt
    16621 tcaaaagtaa atgaagcagt aattgaagct ttgcaaaaaa caggaaaatc tatcgaccaa
    16681 atcaaaattg cttgcctagg tttggctttt aaacctgata ttgatgattt acgtgaaagc
    16741 ccggccttaa aaattaccga aaaattggca gaaaaatatg taggtcaaat cttagcagtt
    16801 gagccaaatg ttgaagagct accgaaaaaa ttggctaaga aaaatatctc tttagttact
    16861 gttgatgaag cactaaaact ggctgatgta gtggttgtgt tggtggatca tagagaattt
    16921 agagaacttg ctgcgattcc atcacatatt actgttattg atactaaggg tatctattaa
    16981 ttaaggaaat aaaatgaaaa tattgatttt tggaagttgt gtaacacgag atgcctttac
    17041 ttttgataaa aacaacctat tcacattggt ccgatatttt gctagaagct ctttagcgac
    17101 tgcttttgat tctttaaaag tggaagataa atatacaaaa aaacttaaat cagcttttca
    17161 acaaaaaatt gttggtgctg atttatctaa agaatttcga aactatgtta ctcagcaaga
    17221 ttttgactat ttagttattg attttattaa tgaccgatat gatattttcc aatttaataa
    17281 caaaagtaaa gttctgctga cagcagaact taaacagact gatttcctaa aaagaaatca
    17341 gagcaaaggt attgttattg aaggagggag tgatgaatgg tttgatgaat ggaagaaggg
    17401 ttgcattgaa tttattgagt tagcaaaaaa tcaagatttt ctccataaaa ttatcttgaa
    17461 taaggtgatg tggacaaacc aattagctaa tggtgagaag tttattgaag atgataaaat
    17521 tgagaaagct aacacctttt tagaaaggca gtatgagttt atcagcaaat ttattcctca
    17581 ggaaaatatc attacttatt caagtgagtt attcaaagcc aataaagatt atatgttaga
    17641 acaattatca atccctactt taagaaagga tagtaataag ttaattaata aagaacaaat
    17701 tgatgatagt tctcgagatt atctagacta tattaagcac agaattgatg aattatataa
    17761 tcttaac
//
LOCUS       DANLZQ010000042        17663 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.042, whole genome shotgun sequence.
ACCESSION   DANLZQ010000042 DANLZQ010000000
VERSION     DANLZQ010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 17663)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17663)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17663
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.042"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            173..1306
                     /gene="carA"
                     /locus_tag="PXE50_001278"
     CDS             173..1306
                     /gene="carA"
                     /locus_tag="PXE50_001278"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HDL5622198.1"
                     /translation="MFKPAILVLTDGSVFSGKSIGADGHTIGEVVFNTAMTGYQEILT
                     DPSYTKQIVTLTYPHIGNTGINLEDKESPNVCASGLIIRDLPLLHSNFRASSSLSDYL
                     IQQNIVAIADIDTRRLTRILREKGAQAGCILVGDATEENIANALAFANSFGSMAGKDL
                     AQSVTCNELYKWTDGEWQLGKGYVPQQQTEFHVVAYDYGVKHNILRMLAERGCRLTVV
                     PAKTSAEAVLALNPDGIFLSNGPGDPEPCDYAITAIRKLLETQKPIFGICLGHQLLGL
                     AAGGKTKKMVFGHHGANHPVQDLDSQKVLITSQNHGFEVDESSLPSNVRVTHRSLFDG
                     TVQGIELTDRPAFSFQGHPEASPGPNDVAYLFDRFVSEMKKVK"
     gene            1409..4615
                     /gene="carB"
                     /locus_tag="PXE50_001279"
     CDS             1409..4615
                     /gene="carB"
                     /locus_tag="PXE50_001279"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HDL5622199.1"
                     /translation="MPKRTDINTILIIGAGPIVIGQACEFDYSGAQACKALREEGYKV
                     VLVNSNPATIMTDPNMADVTYIEPIEWKTVEKIIEKERPDAILPTMGGQTALNCALDL
                     SKNGVLKKYNVELIGATEDAIDKAEDRGRFKEAMTKIGLNTPKSFVCHSFEEALAAQE
                     QVGFPTLIRPSFTMGGSGGGIAYNRDEFIAICERGFEASPTHELLIEQSVLGWKEYEM
                     EVVRDRADNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIG
                     VDTGGSNVQFAINPANGEMIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLNE
                     LRNDITGGLIPASFEPTLDYVVTKIPRFAFEKFANADDRLTTQMKSVGEVMAMGRTFQ
                     ESLQKALRGLETGICGFNLLSEEPEKIRRELANPGPNRILYVADAFGAGFSLEEVHHY
                     SKIDPWFLVQIQDLVLEELALEKKQFSDLDANEIRRLKRKGFSDKRIAQLTKVSEKMV
                     RDYRHTYAILPVYKRVDTCAAEFASDTAYLYSTYEEECEAKPSDRKKVMILGGGPNRI
                     GQGIEFDYCCVHASLALREAGYETIMVNCNPETVSTDFDTSDRLYFEPLTLEDVLEIV
                     RVENPWGVIVHYGGQTPLKLANALSDAGVNIIGTSADSIDAAEDRERFQQILNTLGLK
                     QPANRTARNALEAVALANEVGYPLVVRPSYVLGGRAMQIVYNDEELNRYMREAVSVSN
                     DSPILLDHFLNNAIEVDVDCICDGENVLIGGIMQHVEQAGIHSGDSACSLPAYSLSGH
                     VLDEIRKQTNAMAFALGVKGLMNVQFAVQNEVVYVLEVNPRASRTVPFVSKATGRPLA
                     KIAARVMAGETLADLNALEEIIPSKFFVKEAVFPFIKFPGVDTILGPEMRSTGEVMGI
                     GNTFAEAFFKAQLGAGERIPKVGKVFMSVIEEHKPALIYIAKRFQEQGYGLCATFGTA
                     NFLRQHGIAVQTVNKVREGRPHIVDAIKNGEIALVINTVSGEPEVIADSHSIRRTALQ
                     QRVPIYTTLAGADAISYGVKHINEFDVYSVQELEQKAN"
     gene            complement(4690..5481)
                     /locus_tag="PXE50_001280"
                     /pseudo
     CDS             complement(4690..5481)
                     /locus_tag="PXE50_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012072249.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose isomerase"
     gene            5684..6682
                     /gene="yiaK"
                     /locus_tag="PXE50_001281"
     CDS             5684..6682
                     /gene="yiaK"
                     /locus_tag="PXE50_001281"
                     /EC_number="1.1.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005757429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydro-L-gulonate 2-dehydrogenase"
                     /protein_id="HDL5622200.1"
                     /translation="MRVSYEELKAQFKRVLLARNVREEIAEECATVFADTTQAGAYSH
                     GVNRFPRFIQQLENGDIVPEAVPTKVLSLGAIEQWDAHQAIGNLTAKKMMDRAMELAS
                     ENGIGVVALRNANHWMRGGSYGWQAAEKGYIGICWTNALAVMPPWGAKECRIGTNPLI
                     IAVPTNPITMVDMSCSMYSYGMLEVHRLAGRQTFVDAGFDDDGNPTRDPATVEKNLRL
                     MPMGFWKGSGLSIVLDMIATLLSNGESTAAVTEDKDDEYCVSQVYIAIEVDRLIDGKT
                     KDEKLNRIMEYVKTAERADPDVAVRLPGHEFTQILADNKANGIPVDDTVWAKLQAL"
     gene            6807..7172
                     /locus_tag="PXE50_001282"
     CDS             6807..7172
                     /locus_tag="PXE50_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhcH/YjgK/YiaL family protein"
                     /protein_id="HDL5622201.1"
                     /translation="MFFGHISQVKANRYPPAIQIALNYLKNTDFDAMEAGVYELKGRQ
                     IYVQVLDLNTKSKHEFQPEVHRNYLDVQYLHRGKEIMAAAVDTGTNPIAMEYNPERDI
                     QYYQSVANENEFRCVEGNF"
     gene            7236..7715
                     /locus_tag="PXE50_001283"
     CDS             7236..7715
                     /locus_tag="PXE50_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HDL5622202.1"
                     /translation="MKALAQLVGKLLEILVVVILSAMSILVFVNVVLRYGFNSSISVT
                     EEVSRYMFVWLAFLGAVLAFSENQHVKVTMLTDKLSPTARNILSVVTDLAMLFCCYLI
                     VDGSWIQFNLNLNNFAPISGLPQGITFLASTVAGVLIGLLIIARIVATVGVIAKGEK"
     gene            7716..8993
                     /locus_tag="PXE50_001284"
     CDS             7716..8993
                     /locus_tag="PXE50_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017806296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HDL5622203.1"
                     /translation="MTVVIFLSVLLGSILLGIPVAFALLVCGVALMLHLDLFDAQILA
                     QQIVSGADSFSLMAIPFFILAGEIMNEGGLSKRIIDLPMKLVGHKRGGLGFVAILAAM
                     IMASLSGSAVADTAAVVAMLLPMMKTTGYPIDRSAGLIGTAGIIAPIIPPSIPFIVFG
                     VASGVSITKLFLAGIFPGIMMGICLAALWWWQAKRLDLMTFSKATKEELCISFKNSIW
                     ALLLPVIIIGGFRSGMFTPTEAGAVATFYALIVSLFVYREMKFKDLYKVVLAAAKTTA
                     VVMFLVAAANVTGWLITVAELPMMLTELLEPLIESPTTLLLVIMLAVFIIGMVMDLTP
                     TVLILTPVLMPLVEEAGIDPVYFGVLFILNTSIGLITPPVGNVLNVITGVSKLPFDQA
                     AKGVMPYLVMMICLLLLFVFFPSLVLVPLSWMQ"
     gene            9096..10082
                     /locus_tag="PXE50_001285"
     CDS             9096..10082
                     /locus_tag="PXE50_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HDL5622204.1"
                     /translation="MKLFNLKTLFALVAGVAVMSGSAMAETSLRFGYEAPRSDTQHIA
                     AKKFDELLAAKTKGEIKLKLFPDSTLGNAQTMISGVRGGTIDIEMSGSPNFTGLEPKL
                     NVIDIPFIFKDREHVYKVLDGEVGQGLLKDLEAQGLKGLAFWDVGFRAFSNSKHPVTK
                     PEDIKGLKVRTNQNPMYIQAFTLLGGNPVPMPLSELYTALETRAVDAQEHPIGIFWSA
                     KLFEVQKHLSLTNHGYTPLIVVMNKAKFDGLAPELQTALVEAAKEAGQFQRDLNVKNE
                     KEIIEKLRKQGIEVIEQVDNAPFKAAIEAEVRKAFVEKHGDELLKKVDALAQ"
     gene            10156..11139
                     /locus_tag="PXE50_001286"
     CDS             10156..11139
                     /locus_tag="PXE50_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HDL5622205.1"
                     /translation="MKLFNLKTLAAFVAGFALFSTAQAETSFRFAYEAPRSDTQHIAA
                     KKFNDLLQEKSQKGLKLSLFPDSTLGNAQTAISGVRGGTIDIAMSSSSNFTGLEPKLN
                     VIDIPFIFKDRDHAYKALDGEIGQGLLTALEAHGLKGLAFWEVGFRAFSNSKHPITKP
                     EDIKGLKIRTNQNPMYIQAFSILGANPVPMPLSKLYTALETKAVDAQEHPIGIFWSAK
                     LYEVQKYFSFTNHGYTPLIVAINKAKFDALPAEQQTALVEAAKEAGKYQRQLNLENEQ
                     KIIDSLKKAGIEFVDNLDTTPFKDAVSAETRKAFIEKNGDGLVKAIDALAK"
     gene            11270..12754
                     /locus_tag="PXE50_001287"
     CDS             11270..12754
                     /locus_tag="PXE50_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HDL5622206.1"
                     /translation="MQHIIKRFGSHTAVNDVSLDIHSGEIVALLGENGAGKSTLIKIL
                     AGIYDRDEGDILFHNQKIQSAHAIEKGNKKPIAFIHQDLGLIEWMTIAENMAFVMGFP
                     RKFGLIDWAKVREQSQKALDFVGIKLSADTRVFDLSRTEKALLAIARAIAVNAEILVL
                     DEPTASLPASDVEHLFTVLNRLRSQGVGMIYVTHRLDEVIAISDRILVMRDGFPVAEG
                     QTKLYDVKGLVKAIVGEESRGRQRVDLPTDTPEILSLQNVVVGDTGPVNFRLHKGEMI
                     ALAGLRGAGQEEIGRLLFGERTLDKGEIQLDKRSYSAKDPQDAIAKGVALVAGDRTRE
                     SVFMSMTTSENLFINPVLSGHSPLKRYSRREEWGESWYKFQLFDIRPKNLFIDASALS
                     GGNQQKIVLARWMHLNTPVLILEDPTAGVDVGARAEIYDLLNKALAEGVAIIVISTDF
                     EEIAHLCNRALVFNRGEIAGELLNEEVTFANLLALASDSQSKKQ"
     gene            12949..13995
                     /locus_tag="PXE50_001288"
     CDS             12949..13995
                     /locus_tag="PXE50_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5622207.1"
                     /translation="MAQTNIKSTALEQPVSIARDGFMAWFSQMSTRYGLLWLCVLLVI
                     IFSLTTESFASMLTLNAILESKSKIALLALAATTTMIVGKIDLNVGFGIVLWHILVIT
                     LQVQYGFSWYMAILIVLVIAALYGLLNGILVALADIDSFVATLGSGTVLYAVALWHSG
                     GRQIVGDLPDEFIALNSTEIFGIPISAFYVLAVAIVMWLVTEHTPTGRCMYAVGGNPT
                     AARLNGINIKKYTIVPFIVSSVITAFTGVLISAQQGVGQASVGMDYLLPALVGAFLGS
                     TTIRPGRINVWGTVVGIAILAIGISGIQQFGGAFWVEPLFNGATLLLSITIAGYAQRK
                     RLLNQKAVQKKSTN"
     gene            14008..15117
                     /locus_tag="PXE50_001289"
     CDS             14008..15117
                     /locus_tag="PXE50_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005757420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDL5622208.1"
                     /translation="MKKAFRTTLTAIATLTAIAFGNNAFANDDPFVQEAKQLVAAATA
                     KQEKWDGPTTGPQLQKEKTVIFIASDMKNGGVLGVIDGMKEAVGVTGWKLDVLDGAGT
                     VNNQLAALNQAIARKPDAIVIGGWNPNVAKIPLQKATKNGIKLAAWHATPEPGAIDKY
                     GIFYNVTSDSDEIARLSAMLAVAESNGKAKAIILTDSLYEIALRKANVMKEVIEKCKE
                     CKVLEFIDTPLADTSSRMPNLTFSLLQKYGDDLEYALAINDLYFDFMAPSLRTAGKDK
                     PFSISAGDGSVTAYQRIRNGDKQFATVPEPLNLHGWQLVDELNRAFANEKPSGYITPA
                     HLVTKENVAFDGGENNLYAPQNGYKGAYKAIWGVK"
     gene            15222..16112
                     /locus_tag="PXE50_001290"
     CDS             15222..16112
                     /locus_tag="PXE50_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HDL5622209.1"
                     /translation="MSNKFIPKISNPRFNELVGNTFELEELFDKAIWAEGPAWSKPQQ
                     ALYFSDVKGCTMYRWTEQDGTQVFRQPSYFSNGNAFDANDNLITCEHGNRGISLTTPS
                     GEYRFLVGQLDGKRLNSPNDVVVKSDGIIWFTDPPYGILSDNEGKQSPSEIIGCYIYC
                     YDPKTDKLNIATFNTMRPNGLAFSSDEKQLFVADMSSVEFDEDGLHHLVVFDVDGNKL
                     KNRRDVAEISPGIPDGFRIKQNGVIFCSCEEGIIALLPDGTELGRFVLGKLTSNCSFG
                     DDEQTLFITCSNSVYRLTIK"
     gene            16184..17653
                     /locus_tag="PXE50_001291"
     CDS             16184..17653
                     /locus_tag="PXE50_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005610664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase"
                     /protein_id="HDL5622210.1"
                     /translation="MDNKMNYTLGIDCGGTFIKAALFDTQGNIQALHRENVSVISEQA
                     GYAERDMSQLWAICAEVVRSTIEKSGVNPADIKAVGISAQGKGAFLLDKQNRPLGRAI
                     LSSDQRSLEIVKQWQAEGIPQQLYPITRQTLWTGHPVSILKWVQQNEPERYAQIGAVL
                     MSHDYLRFCLTGELHCEETNISESNLYNMEKGEYDQQLADLLGMPDVLEKLPPVIEPN
                     KISGYVTENAAKLTGLAVGTPIVGGLFDVVSTARCANLDDETKLNAVLGTWSVVSGIT
                     DHIDASQSLPFVYGRYAEAGKFIVHEASPTSAGNLEWFVNQWKLDYVKINQAVAQLPP
                     AASSVLFVPFLYGSNAGLGMQAGFYGMQAHHTQAHLLQAIYEGVLFSLMSHLNRMFIR
                     FPKADVLRVTGGPVKSKVWMQMLADLTGMRLEIPQMEETGCLGAALMAMQGVGLDISQ
                     VQALNNEMQVFEPNPENYAAYQTKYQRYQKLTEALNTMI"
BASE COUNT         4964 a         3866 c         4148 g         4685 t
ORIGIN      
        1 attcataata attgcatata ttttcacttc cgagtagaaa atgaaataaa aaaagaagaa
       61 agaaataggc aaaataacta atttttactt gaatgcaaac gtttgcttga ttaaacttag
      121 tcgcctactt ctaaggctac acagataaaa tttgatgatt aggagtaaaa caatgttcaa
      181 accagcaatt ctggttctca ctgacggttc tgtcttttcc ggcaaatcca ttggtgctga
      241 cggtcacact atcggtgaag tggtatttaa cactgcgatg accggttatc aagaaatcct
      301 taccgatcct tcttatacta aacaaatagt caccctgact tacccccaca ttggcaatac
      361 cggcattaat ttagaagata aagaatcccc caatgtttgt gcctccggct taattattcg
      421 tgatcttcct cttctccata gcaacttccg tgcgtcctcc tcactttcag attatctcat
      481 tcaacaaaac attgtcgcta ttgccgatat tgatacccgc cgtttaaccc gaattttacg
      541 cgaaaaaggg gcacaagccg gttgtatttt agtaggcgat gccacagaag agaatattgc
      601 taacgctttg gcatttgcca acagtttcgg ttctatggct gggaaagatt tggctcaaag
      661 tgtcacctgc aatgaattat ataaatggac agatggtgaa tggcaattag gtaaaggtta
      721 tgtaccgcaa caacaaaccg agttccacgt agttgcctat gattacggtg taaaacacaa
      781 cattttgcga atgcttgccg aacgaggctg tcgcttaacc gttgtgccgg caaaaacctc
      841 tgctgaagct gtgcttgcgt taaatccgga cggtattttc ctttctaacg gcccggggga
      901 cccggagccg tgcgattatg ccattaccgc aatccgaaaa ttattggaaa cgcaaaaacc
      961 cattttcggc atttgcttag ggcatcaact tttaggttta gcggcaggcg gtaaaaccaa
     1021 aaaaatggtg tttggtcatc acggagctaa tcacccggta caagatttag acagccaaaa
     1081 agtgctcatc accagccaaa accacggttt tgaagtagat gaatccagct taccatctaa
     1141 tgtgcgagtg actcaccgct cactgtttga cggcacggtg caggggattg aactcactga
     1201 tagaccggcg ttttcgttcc aaggtcaccc ggaagccagc ccggggccga atgatgttgc
     1261 ctatttattt gaccgatttg tcagtgagat gaaaaaagtg aagtaaggac gtacctatgt
     1321 gtgtccatca agcggtcgaa atttgcaaaa aacttaccaa aaatgaccgc ttgtagcctg
     1381 aaataaacga gataaaagag agcccaaaat gccaaaaaga acagacataa acactatcct
     1441 aattatcggt gccggtccga ttgtgatcgg tcaagcgtgt gaatttgact actccggagc
     1501 ccaagcgtgc aaagcgttgc gtgaagaagg gtataaagtg gtgttggtga actccaaccc
     1561 tgcaaccatt atgaccgacc cgaatatggc agatgtgact tacattgagc cgattgaatg
     1621 gaaaacggtt gaaaaaatca ttgaaaaaga acgccctgat gccattttac cgactatggg
     1681 cgggcagaca gcgttgaact gtgccttaga tctttcgaaa aacggtgtgc tgaaaaaata
     1741 taatgtagag ctgatcggag ctaccgaaga cgcgattgat aaagccgaag atcgtggtcg
     1801 ttttaaagaa gcaatgacta aaatcggctt gaatacgcca aaatcattcg tttgccacag
     1861 ttttgaagag gccttagcag cacaagagca ggttggcttt ccaaccctga ttcgcccctc
     1921 tttcacgatg ggaggctccg gcggtggtat tgcttataat cgagatgaat ttatcgccat
     1981 ctgcgaacgt ggttttgaag cctcgcctac tcacgaatta ctgattgaac aatccgtact
     2041 aggctggaaa gagtatgaaa tggaagttgt gcgtgaccgt gccgataact gcattatcgt
     2101 ctgctcgatt gaaaacttcg acccgatggg tgtacacacc ggcgactcca ttaccgttgc
     2161 tccggcacaa acgctaaccg ataaagagta tcaaattatg cgtaacgctt cgctggcggt
     2221 attgcgtgag atcggcgtgg acaccggcgg ttcaaatgtg caatttgcga ttaaccctgc
     2281 aaacggcgag atgatcgtca ttgaaatgaa ccctcgtgtg agccgttctt ctgcactcgc
     2341 atctaaagcc accggcttcc cgattgccaa agttgcggcg aaattggctg taggctacac
     2401 actcaacgaa ttgcgtaacg acatcaccgg agggctgatt ccggcttcat tcgagccgac
     2461 tttagattat gttgtgacca aaattccacg cttcgccttt gaaaaatttg ccaatgcaga
     2521 cgaccgatta accactcaaa tgaaatcggt aggcgaagta atggcaatgg gaagaacctt
     2581 ccaagagagt ttacaaaaag ccttgcgagg cttggaaacc ggcatttgcg gctttaactt
     2641 gctttccgaa gagcctgaaa aaatccgccg tgaacttgcc aaccccggac caaaccgtat
     2701 tttgtatgtt gccgatgcct ttggagcagg cttttcattg gaagaagttc accactattc
     2761 taaaatcgac ccgtggttct tggtgcaaat tcaagactta gtacttgaag aattagcgtt
     2821 agagaaaaaa cagtttagcg atctagatgc taacgaaatc cgccgcttaa aacgcaaagg
     2881 cttctcagac aaacgtatcg cacagcttac caaagtcagc gaaaaaatgg tgcgggatta
     2941 ccgccatact tacgctattc taccggtgta taaacgggta gatacctgtg cagccgagtt
     3001 tgcctcagat acggcttacc tctattctac ttacgaggaa gagtgtgaag ccaaaccgtc
     3061 tgatcgcaaa aaagtgatga ttttaggcgg cggaccaaac cgtatcgggc aggggattga
     3121 atttgactac tgctgcgttc acgcctcgct tgctctgcgt gaggcaggtt atgaaaccat
     3181 tatggtgaac tgcaaccctg aaaccgtttc caccgatttc gacacctccg accgcctcta
     3241 tttcgagccg ctaacattag aagatgtact ggaaattgtg cgtgtagaaa acccgtgggg
     3301 cgtgattgtg cattacggcg gtcaaacacc actgaaatta gcgaatgcct tatctgatgc
     3361 cggtgtaaac attatcggga cttccgccga cagcattgat gccgccgaag accgtgaacg
     3421 tttccaacaa attctaaaca ctctcggttt aaaacagccg gcaaatcgca ccgcccgtaa
     3481 tgcgttggaa gcggtggcat tggcaaatga agtaggctat ccgctggtgg ttcgcccatc
     3541 ttatgtgcta ggtggtcggg caatgcaaat tgtgtataac gatgaagagc taaaccgcta
     3601 tatgcgtgaa gcggtatcgg tttccaacga cagcccgatt ttactcgacc acttcctcaa
     3661 taatgcgatt gaagttgatg tggattgcat ttgtgacggc gaaaatgtac tcattggcgg
     3721 cattatgcaa cacgttgagc aagccggtat tcacagtggc gatagtgcct gctcactacc
     3781 tgcctattcg ttaagcggtc atgttttgga cgaaattcgc aaacaaacca acgcaatggc
     3841 gtttgctctc ggtgtgaaag gcttgatgaa cgtacaattt gcagtacaaa atgaggtcgt
     3901 ttatgtgttg gaagttaacc ctcgagccag ccgtactgta ccgtttgtca gcaaagctac
     3961 cggtcgccca ctggcaaaaa tcgctgctcg cgtgatggct ggtgaaaccc ttgccgactt
     4021 aaatgcatta gaggaaatta tcccaagcaa attcttcgtt aaagaagcgg tattcccatt
     4081 catcaaattc ccgggtgtgg ataccattct cgggcctgaa atgcgttcta ccggcgaagt
     4141 gatgggcata ggtaatacct ttgctgaagc gttcttcaaa gcacaactgg gtgccggtga
     4201 acgaattcca aaagtcggca aagtgtttat gtcggttatt gaagagcata aacctgcttt
     4261 aatttacatt gccaaacgtt tccaagaaca aggctacggt ttatgtgcca ccttcggcac
     4321 tgcaaacttc ctacggcaac acggaattgc agtccaaacg gtaaacaaag ttcgtgaagg
     4381 gcgaccgcat attgtcgatg cgatcaaaaa cggcgaaatt gcgttggtaa tcaacaccgt
     4441 cagcggcgag cctgaagtga ttgccgacag ccactctatc cgccgtaccg ccttgcaaca
     4501 acgtgtgcct atttacacca cccttgcagg tgctgatgct atctcctacg gcgtaaaaca
     4561 tatcaatgag tttgatgtgt attcagtgca ggaattagaa caaaaggcta actaaaataa
     4621 agctaaaatg acaagcggtc agattttgca aattttttac aaattctgac cgcttgtgtt
     4681 tgtagaggat tatttagtaa atttatatgc taaatcattc cagcgtaatt catttttgag
     4741 ttgtggtagc tcggtatttt ggttgatatg gataaactca ataccaaaat attcagcgaa
     4801 cattcgtagc atatcggcat caatatctaa actaaataca ctatgatgag caccgccggc
     4861 tagaatccat gcttgagtac ctacataaaa atttggttga agcttccaaa aagcatgccc
     4921 aactggtaaa tttggcattg gatttggtga ggcgatagcg tctaaatccg caacaaccat
     4981 tctaaaacgg tctcccatat ctacaacggt tgcattcact gcttttcccg ccttactact
     5041 gaaaattaag cgaacaggat ctgccttacc gccaatacct agcggtcgaa tggctaatgt
     5101 tgatttctct ttggcaatag acggacaaac ttcaagcata tgagccccca ataccacttg
     5161 gttttgttca tctaaatcat aggtgtagtc ttccataaag gaagaaccgt ttggtaagcc
     5221 ataacccatc actttcactt cacgcacaag agctgcggtt ttccaacctc cttcaccacc
     5281 aaatccgtag ccttgttcca ttaaacgctg aacagccaag cccggtaatt gtttaatccc
     5341 atttagattt tggaaattat cagtaaaagc tttaaatcca ccattatcta agaatgtttt
     5401 taagccgatt tcaatacgag cagaatatgc gagagattct cttgctgaac cattttcttg
     5461 caagctatcc tcaacattat acaagcggtc agattttgca aaaaaatgac cgcttgttgc
     5521 catttctaaa gtgtgatcta cctctcaaat ttacaaaatt ttttataaca tattgattta
     5581 aaatgttttt tatatttttc ctttaattga ctttaatttg tcttaagagt aacttataaa
     5641 acgtgatttt actatttgaa atattgaggt attcaagatg actattcgag tttcctatga
     5701 agaattaaaa gctcaattta aacgtgttct gttggctcgc aatgtgcgtg aagagattgc
     5761 cgaagagtgt gccactgtgt ttgccgacac cactcaagcg ggtgcttatt cacacggggt
     5821 aaaccgtttc ccacgcttta ttcagcagtt agagaacggt gatattgtgc cggaagccgt
     5881 gccgactaaa gtgctttcac tgggggcgat tgagcagtgg gacgctcacc aagccatcgg
     5941 taacttaacc gcaaaaaaaa tgatggacag agcaatggag cttgcatctg aaaacggcat
     6001 cggcgtagtg gcgttacgta atgcaaacca ctggatgcgt ggcggttctt acggatggca
     6061 ggcggcagag aaaggctata tcgggatctg ctggacgaac gcccttgcgg taatgccgcc
     6121 ttggggggcg aaagagtgcc gtatcgggac taacccgtta atcattgcgg tgccgactaa
     6181 cccaatcacg atggtggata tgtcttgctc aatgtactca tacggaatgt tggaagtgca
     6241 tcgccttgct ggtcgtcaaa cctttgtcga tgctggtttt gatgatgacg gcaacccaac
     6301 ccgtgatccg gcaacggtcg agaaaaacct ccgtctaatg ccgatgggct tctggaaagg
     6361 ttcgggctta tcgattgtgt tagatatgat cgccaccttg ctctctaacg gtgaatccac
     6421 tgcggcagtc accgaagata aagacgatga atattgcgtg tcgcaagttt atatcgctat
     6481 tgaagtggat cgcttaattg acggcaaaac caaagacgaa aaactcaacc gtattatgga
     6541 atatgtgaaa accgcagaac gtgccgaccc tgatgtggca gtacgtttac cgggccacga
     6601 gttcacccaa attctagccg ataacaaagc caacggcatt ccggtggatg acaccgtttg
     6661 ggcgaaatta caggcgttgt aattgcaaat tgaccggtag ggtgggcgta agcccacgca
     6721 ttagacacaa tcataagatg acgtgggctt acgcccaccc tacaagcggt catttttccg
     6781 cagaatttta caaaacggag gtatgaatgt tttttggtca tatttcacaa gttaaagcga
     6841 atcgataccc gccggcgatc caaattgcgt tgaactatct gaaaaatacc gattttgatg
     6901 cgatggaagc aggggtttac gaactcaaag gcagacaaat ttatgtgcag gtgttggatt
     6961 tgaacaccaa atcgaaacac gaatttcagc cggaagtgca tcgcaattac ctcgatgtgc
     7021 agtatctaca ccgaggcaaa gagataatgg ctgcggcggt ggataccggc accaatccga
     7081 ttgcgatgga atacaaccct gagcgggata ttcaatatta tcaatccgtt gccaacgaaa
     7141 atgaatttcg ctgcgttgaa ggcaattttt gacggcacgg aaaccattcg caaagtggtg
     7201 gtaaaaattg cgatgagcga aattgaggag caacgatgaa agccttagct caattagtcg
     7261 gaaaactgtt agaaatcttg gtggtggtga ttttatccgc aatgtcgatt ttggttttcg
     7321 tcaatgtggt actacgttac ggttttaaca gcagcattag cgtgaccgaa gaggtgtctc
     7381 gctatatgtt tgtttggttg gcgtttttag gggcggtgtt ggcatttagc gaaaatcaac
     7441 acgttaaagt cacaatgctg accgataaat tatcgccaac ggctcgtaat atcttaagcg
     7501 tagtcacaga tttagcgatg ttgttctgtt gctacttaat tgtggacggt agctggattc
     7561 aatttaacct caacctgaat aactttgccc cgatttcagg cttaccgcaa ggcatcactt
     7621 tccttgccag cacagtggca ggggtattaa tcggtttatt aattattgcc cgcattgtgg
     7681 caacggttgg cgtgattgca aaaggagaaa aatagatgac tgtggtaatt tttctttccg
     7741 tcttgcttgg ctcgatttta ttgggcattc cggtagcttt cgccctgttg gtctgcggtg
     7801 tggcgttaat gttgcattta gatctgttcg atgcccaaat tttggctcaa caaattgtga
     7861 gcggtgcaga cagtttctcg ctaatggcaa ttccgttctt cattcttgcc ggtgaaatta
     7921 tgaacgaggg cggtctctcc aaacggatta tcgacctgcc gatgaaatta gtcggtcata
     7981 aacggggcgg tttaggtttt gtagcaattt tagcggcgat gattatggca agcctttccg
     8041 gttcggcggt ggcggatacc gcagcggtag tcgcaatgct actgccgatg atgaaaacca
     8101 ccggttatcc gattgaccgc tctgccggtt taatcggtac ggcagggatt atcgccccaa
     8161 tcattccgcc aagcattccg tttatcgtat ttggtgtggc tagtggcgtg tccattacca
     8221 aactgttctt agccggtatt ttcccgggca ttatgatggg gatctgcttg gctgcccttt
     8281 ggtggtggca ggcaaaacgt ttggatttaa tgaccttctc caaagcgacc aaagaagaac
     8341 tttgcatttc atttaaaaac agtatttggg cgttattgtt gcctgtcatt attatcggtg
     8401 gtttccgctc gggaatgttc accccaaccg aagcgggtgc ggtcgcaact ttctatgcct
     8461 tgattgtttc actgtttgtt taccgtgaaa tgaagttcaa agatttatac aaggtagtgt
     8521 tggcggcagc gaaaaccacg gcagtagtga tgttcttagt ggcagcggca aatgtgaccg
     8581 gctggctgat taccgtagcg gaattaccga tgatgctcac cgagctgtta gagccgttaa
     8641 ttgaaagccc gaccacactc ttattggtga ttatgttagc ggtgtttatt atcggaatgg
     8701 tgatggactt aaccccaacc gtgctgattt taacgccggt attaatgccg ttggtggaag
     8761 aggcaggcat tgacccggtt tacttcggtg tgctgtttat tcttaacacc tccatcggct
     8821 tgattacacc accggtcggc aacgtgctaa acgtgattac cggcgtgtcg aaactgccgt
     8881 tcgaccaagc ggctaagggc gtaatgcctt acctcgtaat gatgatttgt ttactactgt
     8941 tgttcgtgtt cttcccgtca ctggtgttag tgccgttaag ctggatgcag taatggtttg
     9001 aaccgaaaca agcggtcgaa ttgacgcaaa aatttgcaaa tttttttggc aaaacagacc
     9061 gcttgcaact caatttttaa tcacaggaga accctatgaa attatttaat ttaaaaacct
     9121 tatttgcctt agtggcaggc gttgcggtaa tgagcggctc tgcaatggca gaaacctcac
     9181 tgcgttttgg ttatgaagcc ccacgttccg atacccaaca catcgccgcc aaaaaattcg
     9241 atgaattatt ggcagcaaaa accaaaggtg aaattaaatt aaaactgttt ccggacagca
     9301 ccttaggtaa tgctcaaacg atgatcagcg gcgtgcgtgg cggtactatc gacattgaaa
     9361 tgtccggctc gccaaacttt accggcttag agccaaaact aaatgtgatt gatattccgt
     9421 ttattttcaa agatcgtgaa cacgtttaca aagtattaga cggcgaagtt ggtcaaggct
     9481 tattaaaaga tttagaagcc caaggcttaa aaggcttagc cttctgggac gttggcttcc
     9541 gtgctttctc caactcaaaa caccctgtga ccaagccgga agacatcaaa ggcttaaaag
     9601 tccgcaccaa ccaaaacccg atgtacattc aagccttcac cttactaggc ggcaacccgg
     9661 tgccaatgcc actttctgag ctttacaccg cactcgaaac ccgtgccgtt gatgcccaag
     9721 aacacccaat cggcattttc tggtcggcaa aactgtttga agtacaaaaa catttaagtt
     9781 taaccaacca cggctacacc ccgttaatcg tggtgatgaa caaagcgaag tttgacggct
     9841 tagctcctga attacaaacc gcattagttg aagccgcaaa agaagccggt caattccaac
     9901 gtgatctcaa cgtgaaaaac gaaaaagaga tcatcgaaaa attacgcaaa caaggcatcg
     9961 aagtgatcga acaagtggat aacgccccgt tcaaagcagc gattgaagcg gaagtccgca
    10021 aagctttcgt ggaaaaacac ggcgatgaat tattgaaaaa agtggatgcg ttagcacagt
    10081 aattgacttt attttagtct aaagctccct ccgtttgggg ggagttgttg tatagactct
    10141 actataggag agactatgaa actgtttaat ttaaaaactt tagccgcttt cgttgccggt
    10201 tttgcactgt tttcaaccgc acaagcagaa acctcattcc gctttgcgta tgaagctcct
    10261 cgttctgata ctcaacatat tgcagcgaaa aaatttaatg atttgctgca agaaaaatcc
    10321 caaaaagggc tgaaattaag cctcttccct gatagcacgc tcggcaacgc acaaacggcg
    10381 attagcggtg tgcgtggcgg tactattgat attgcaatgt ccagctcctc taactttacc
    10441 gggttagaac caaaactgaa tgtgattgat attccgttta ttttcaaaga cagagaccac
    10501 gcctataaag ccttagatgg agagattggt caaggtttat taaccgcatt agaggctcac
    10561 ggtttgaaag ggttggcgtt ttgggaagtt ggtttccgag cgttttccaa ctccaagcac
    10621 ccgatcacca aaccggagga tattaaaggc ttaaaaatcc gtactaacca aaacccgatg
    10681 tatattcaag ccttctctat tttaggtgca aatccggtgc caatgccgct ttccaagctt
    10741 tacactgcac tggaaaccaa agcggttgat gcccaagaac acccaatcgg cattttctgg
    10801 tcggcaaaac tctatgaagt acaaaaatat ttcagcttta ctaaccacgg ttacaccccg
    10861 ttaattgtgg cgattaacaa agcgaaattt gatgcactgc cagccgagca acaaaccgca
    10921 ttagttgaag cggcaaaaga agccggaaaa taccaacgcc aacttaacct agaaaatgag
    10981 cagaaaatta tcgactcgct caaaaaagca ggtattgaat ttgtggataa cttagatacc
    11041 acaccgttca aagatgccgt atcggctgaa acccgcaagg catttatcga gaaaaacggt
    11101 gatggcttag ttaaagccat tgatgcattg gcgaagtaaa aatagagcta caaagtgctc
    11161 ggttaaacta acctcacacg aatcgtgtga ggtacaagcg gtcaaaatcc gcaaaatttt
    11221 tacacatctt tcctcaaagg aggaacaaat ggcacagccc attttaagta tgcagcacat
    11281 catcaaacgc tttggtagcc atacggcggt gaatgatgtc agccttgata tccactcagg
    11341 cgagatcgtt gccttactcg gtgaaaacgg tgcaggtaaa tcgaccctaa tcaaaatcct
    11401 tgccggtatt tatgaccgtg acgagggtga tattcttttc cataaccaaa aaatccaatc
    11461 tgcccacgct attgagaaag gcaacaaaaa gcccatcgct tttatccacc aagatttagg
    11521 cctaatagaa tggatgacga ttgccgaaaa tatggcattt gtaatggggt tccctcgcaa
    11581 atttggcttg attgactggg cgaaagtgcg agagcagtcg caaaaagccc ttgattttgt
    11641 aggcattaaa ctctctgccg acactcgagt gtttgattta agccgtaccg aaaaagcctt
    11701 actcgccatt gcccgtgcga ttgccgtcaa tgcagaaatc ttggttttag acgaacctac
    11761 tgcttcccta cctgcctctg atgtagagca tcttttcact gtgttaaacc gcttacgttc
    11821 ccaaggtgtg ggaatgattt atgtgaccca ccgtttagat gaagtgatcg ccatttccga
    11881 ccgcattttg gtgatgcggg acggtttccc ggttgcagaa gggcaaacca agctctatga
    11941 cgtcaaaggc ttggtcaaag cgattgtagg cgaagagagc cgtggcagac agcgggtgga
    12001 tttaccaacc gatactcctg aaattttaag cctgcaaaat gtcgtggttg gcgacaccgg
    12061 cccggtgaat ttccgtctgc acaaaggtga gatgattgcc cttgccggct tgcgtggagc
    12121 agggcaggaa gaaatcggcc gcttattatt tggggagcga accttagaca aaggcgaaat
    12181 tcagttagac aagcggtcat attctgctaa agatccgcaa gatgcgatag ccaaaggtgt
    12241 ggcattggtt gcgggagacc gcacccgtga aagcgtgttt atgtcaatga ctaccagtga
    12301 gaacctgttt atcaacccgg tactaagcgg tcattcacca ttaaaacgct actcccgccg
    12361 tgaagagtgg ggtgagagct ggtacaaatt ccaactattc gatattcgtc cgaaaaattt
    12421 gtttattgat gccagtgcgt tatccggtgg taatcagcag aaaatcgtgt tggcacgttg
    12481 gatgcacctc aatacgcctg ttctgatttt agaagacccg actgccggcg tggatgtagg
    12541 agcaagggca gagatttacg acttgctcaa caaagccctt gcagaagggg tcgcaattat
    12601 tgtgatttcc accgactttg aagagatcgc tcatttgtgt aaccgagcat tagtcttcaa
    12661 ccgaggggaa attgccggtg aactactgaa cgaagaggtg actttcgcca atttgctggc
    12721 gttggcatcg gatagtcagt cgaaaaaaca ataacttact ctcgcccgct tgcgggagag
    12781 agacagctaa aaatagcgtc aggctatttt tagcagagag agggtaaaca agcggtcatt
    12841 tttcttaaaa aatattgcga accctctccc tccgaaagcc taacggcttt ctcctccctc
    12901 tcccgcaagc gggcgagggg aaaatgcaga attttaacgg agtaatttat ggctcaaaca
    12961 aacatcaaat caaccgcact ggaacaaccg gtatctatcg cccgtgacgg ttttatggca
    13021 tggttttcac aaatgtccac tcgttatggc ttactgtggt tatgtgtgtt attggtgatt
    13081 attttctcac ttaccaccga atctttcgcc tcaatgctga cattaaatgc gattttagaa
    13141 agtaaatcga aaattgccct acttgctttg gcagccacaa ctacaatgat tgtcggcaaa
    13201 atcgacctga acgtgggttt cggtattgtg ttgtggcaca ttcttgtgat tactctgcaa
    13261 gtccaatacg gcttctcgtg gtatatggcg atcttaatcg tgttagtgat tgccgctctt
    13321 tacggcttgc tgaatgggat tttagttgct cttgctgata tcgatagctt tgtggcaaca
    13381 cttggctcag gcacagtgct ttatgccgta gcactctggc actcgggcgg tcgccaaatt
    13441 gtcggggatt tacccgatga atttatcgca ctcaacagca cagaaatttt cggtatcccg
    13501 atttctgctt tctatgtgct ggcagtggct atcgtaatgt ggttggtgac agaacatacc
    13561 ccgaccggtc gttgtatgta tgcggttggt ggcaacccaa cggcagctcg cctaaatggt
    13621 atcaatatta aaaaatacac cattgtgccg tttattgtct ctagtgtaat cactgctttc
    13681 acaggcgtat tgatctctgc tcaacaaggc gttggtcagg caagtgtcgg tatggactac
    13741 ttactgcccg cattggttgg ggcattctta gggagtacca ctattcgccc agggcgtatt
    13801 aacgtatggg gaacagtggt ggggattgcc attcttgcca tcggtatttc aggtattcaa
    13861 caattcggtg gagcgttctg ggttgagcca ctctttaacg gtgcaacact gttactttcc
    13921 atcactattg caggctatgc ccaacgcaaa cgcttgttaa atcaaaaagc tgtacagaaa
    13981 aaatcgacca actaagagga tttgattatg aaaaaagcat ttcgtacaac cttaactgca
    14041 atcgcaacct taactgctat tgctttcgga aataatgcgt ttgccaatga cgacccgttc
    14101 gtacaagaag caaaacagct tgtcgcagca gctacggcta agcaagaaaa atgggacgga
    14161 ccgacaaccg gccctcaatt acaaaaagag aaaactgtga tttttattgc ctctgatatg
    14221 aaaaacggtg gtgtacttgg tgtgattgac ggaatgaaag aagctgttgg cgtaacgggc
    14281 tggaagttag atgtattaga cggtgcaggt acggtaaaca accaactcgc cgcacttaac
    14341 caagcgattg cccgcaaacc ggatgcgatt gtgattggtg gctggaaccc gaatgtggcg
    14401 aaaatcccac tacaaaaagc gactaaaaac ggcattaaac ttgcagcttg gcacgcaaca
    14461 ccggagccgg gtgcgattga taaatacggc attttctaca acgtgacctc tgactcagac
    14521 gaaattgcac gcttatcggc aatgcttgcg gtggcagaat ctaacggtaa ggcaaaagcg
    14581 attattttaa ccgactcgct atatgaaatt gcgttacgca aagcgaacgt catgaaagaa
    14641 gttatcgaaa aatgtaaaga gtgtaaggtg ttagagttta tcgacacgcc attggcggat
    14701 acctcaagcc gtatgcctaa cctcactttc agcttactgc aaaaatatgg cgacgattta
    14761 gagtatgcgt tggcaattaa cgatctctac tttgacttta tggctccgtc tttacgcacc
    14821 gctggtaaag ataaaccgtt tagcatttcc gcaggtgatg gctcagtaac ggcttatcaa
    14881 cgtattcgca atggtgataa acagtttgca accgtccctg agccacttaa cttacacggc
    14941 tggcagttag tcgatgagct aaaccgtgct ttcgctaacg aaaaaccgtc tggttatatc
    15001 acaccggctc acctagtgac taaagaaaat gtggcgtttg acggtggtga aaacaacctg
    15061 tatgccccac aaaacggtta caaaggcgct tacaaagcga tttggggcgt gaagtaatga
    15121 cgtaggggca aataaatatt tgcctcgaac aagcggttgt tttttgcaaa gattttgcga
    15181 aatttaaccg cttgtcataa aaaatagaga gggtaataca aatgagcaat aaatttatcc
    15241 ccaaaatctc caaccctcgt tttaatgagc tggttgggaa tacgtttgaa cttgaagagc
    15301 tttttgataa ggcaatctgg gcagaagggc cggcgtggag caagccacaa caagccctct
    15361 attttagtga tgtaaaaggt tgcacaatgt accgctggac agagcaagat ggtacacagg
    15421 ttttccgcca gccgtcttat ttttctaacg gcaatgcgtt tgatgcaaac gacaacttga
    15481 ttacctgtga acacggcaat cgaggtatca gtttaaccac gccaagcggt gaatatcgtt
    15541 ttttggtcgg tcaattagac ggaaaacgac tgaactcacc caatgatgtg gtggtaaaat
    15601 cagacggcat catttggttc actgatccac cttacggtat tttgtcggat aacgaaggca
    15661 aacagtcgcc aagcgaaatt atcggttgtt atatttactg ctatgatccg aaaaccgaca
    15721 agctgaatat tgcaactttc aacacgatgc gaccaaacgg cttggccttc tcgtcagacg
    15781 aaaaacaact ctttgtggca gatatgtcga gcgtggaatt tgacgaagat ggcttacacc
    15841 acttagtcgt atttgatgtg gacggtaata aactaaaaaa tcgccgagat gtggcggaaa
    15901 ttagtcccgg cattccggac ggcttccgaa ttaaacaaaa cggcgtaatt ttctgctctt
    15961 gtgaagaggg aattattgct cttttacctg acggcacgga gctgggacga tttgtgctgg
    16021 gtaagctaac ctcaaattgt agctttggcg atgatgaaca aacactgttt attacttgtt
    16081 cgaatagcgt ttatcgttta acaattaaat agcagaatgc attaagtgcg tctgttgtag
    16141 cattacaagc ggtttctttt tcaaaatttt ttacaaacaa ataatggata acaaaatgaa
    16201 ctacacactc ggcattgatt gcggtgggac ttttatcaaa gccgctcttt ttgatacaca
    16261 aggtaatatt caagcccttc atcgtgaaaa cgtttcggta atcagtgaac aggcaggtta
    16321 tgcagagcgt gatatgtcac aactctgggc tatttgtgcg gaagtagtgc gttcaaccat
    16381 tgaaaaaagt ggggtaaacc cagcggatat taaagcagta gggatttccg ctcaaggcaa
    16441 aggggcgttt ttactggata agcagaatcg accgttgggg cgtgcgattt tatcttccga
    16501 ccaacgttcc cttgagattg ttaaacaatg gcaggctgaa ggcattccgc aacaacttta
    16561 cccgattacc cgccaaactc tttggacagg acaccctgtg tcgattttga agtgggtgca
    16621 gcaaaatgaa ccggagcgtt atgcacaaat cggggcggtg ttgatgtcgc acgactattt
    16681 gcgtttttgc ttaaccggtg agttgcattg cgaagagacc aacatttccg aaagcaatct
    16741 ttacaatatg gaaaaaggcg aatacgacca acagttagcc gatttgttgg gaatgccgga
    16801 tgtgttggag aaattaccac cagtgattga accgaataaa atttcgggat atgtgactga
    16861 aaatgccgcc aaattaaccg gtttagcggt gggtacgccg atagtcggtg gcttgtttga
    16921 tgtggtttct accgcacgtt gtgccaattt agatgacgaa accaaactga atgcagtgct
    16981 gggaacgtgg tcggtggtga gcggcattac cgatcatatt gatgcaagcc aatcattacc
    17041 ttttgtttat gggcgttatg ccgaggcagg gaaatttatc gtccacgaag caagcccgac
    17101 ttctgccggt aatttagagt ggtttgtgaa tcagtggaaa ctcgattatg tgaaaatcaa
    17161 ccaagctgtt gcccaattac cgccggcggc aagctcggtg ctgtttgtgc cgtttctgta
    17221 tggctcaaat gcaggcttag gaatgcaagc cggtttctat ggtatgcaag cccaccatac
    17281 ccaagcccat ctcttgcagg caatttacga aggagtgttg tttagcttga tgagccattt
    17341 aaaccgtatg tttatccgct ttccaaaggc tgacgtgctg cgagttaccg gcggaccggt
    17401 gaaatctaaa gtttggatgc aaatgttggc cgatttaacc ggaatgcggc ttgaaatacc
    17461 acaaatggaa gaaaccggct gcttgggtgc ggcattaatg gcaatgcaag gggttgggct
    17521 ggatataagc caagttcaag ccctaaataa tgaaatgcag gtgtttgagc caaatccgga
    17581 aaattatgcg gcttatcaga cgaaatatca gcgttaccaa aaattaactg aagcattaaa
    17641 tacaatgatt taacctgaat tta
//
LOCUS       DANLZQ010000043        17520 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.043, whole genome shotgun sequence.
ACCESSION   DANLZQ010000043 DANLZQ010000000
VERSION     DANLZQ010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 17520)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17520)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17520
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.043"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(251..1384)
                     /locus_tag="PXE50_001292"
     CDS             complement(251..1384)
                     /locus_tag="PXE50_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis PLP-dependent protein"
                     /protein_id="HDL5622211.1"
                     /translation="MTKFNNIETTLVQIGNRTDPRTGAVAMPIILSTAYGRDGLGEST
                     GWDYTRTKNPTRAVLEQGIADLEGGDAGFAMASGMAAIQLVMSLFKAPDEWIISSDVY
                     GGSYRLFDFSHKNHGTLKPVYVNTADLAAIEAAITPNTKAIFVETPSNPLMEECDVAA
                     IAKIAKKHNLMLIVDNTFLTPALFRPIEHGADIVIHSATKYLSGHNDVLAGLIVAKDS
                     DATKVNGQNLTERLFYFQNCAGAVLSPFDSYLAVRGMKTLALRMERHQSNATELAKFL
                     AEQPEIDSVLYSGKSGMLSFRLQKEEWVAKFLKAIKLITFAESLGGAESFITYPATQT
                     HMDIPEAERITRGITNNLLRFSVGLEHVEDIKADLLQAFKQLK"
     gene            complement(1401..2213)
                     /gene="dapB"
                     /locus_tag="PXE50_001293"
     CDS             complement(1401..2213)
                     /gene="dapB"
                     /locus_tag="PXE50_001293"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005696006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HDL5622212.1"
                     /translation="MTLKIGIVGAGGRMGRQLIQAVHNAQGVELGSAFERKGSSLVGS
                     DAGEVAGVGTLGVVISDDVAQNVAGFDLLIDFTRPEGTLEHLDICVAHHKQMVIGTTG
                     FDDAGKAAIKAASEKIGIVFASNYSVGVNLVFKLLEKAAKVMGDYCDIEVIEAHHRHK
                     VDAPSGTALSMGEHIAKTLGRDLKTHGVFERNGITGERKRDEIGFATIRAGDVVGEHS
                     VWFADEGERVEIAHKASSRMTFANGAVRAAKWLNGKQNGLFDMTDVLDLNNL"
     gene            complement(2264..2641)
                     /locus_tag="PXE50_001294"
     CDS             complement(2264..2641)
                     /locus_tag="PXE50_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622213.1"
                     /translation="MGIKVLFGTKISAELQYLPEKDLVKILQFKQHVEIYGLENLAGR
                     NKSSDDVPTNDPYWAEKVAKAQKYSLWHYHIGIPEYDTSQGFGNYTSEYILHYVKGEN
                     FIQIVDFTSHPPFKLPSESYLQN"
     gene            complement(2631..3104)
                     /locus_tag="PXE50_001295"
     CDS             complement(2631..3104)
                     /locus_tag="PXE50_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622214.1"
                     /translation="MMKNLPLSMADTLAVIYPAFDFAADDKPATEQQISLLNFRITMA
                     NQLLIACIETIEKNPNFWAEIDLNDFKKYLNQNKVVIFDTQQYFTDGSRTMAILDNMK
                     SNIRKIEQQLSQATAFNFDLERMKERLNDTFHEVPKDITNVNEFRNWLKGVANGH"
     gene            complement(3172..4260)
                     /gene="rlmM"
                     /locus_tag="PXE50_001296"
     CDS             complement(3172..4260)
                     /gene="rlmM"
                     /locus_tag="PXE50_001296"
                     /EC_number="2.1.1.186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015432676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (cytidine(2498)-2'-O)-methyltransferase
                     RlmM"
                     /protein_id="HDL5622215.1"
                     /translation="MFNKLALYCRAGFEKEVAGEITDKAAQQGIFGFANLKENSGYVI
                     FECYQAGEADRLAQALKFEQLIFVRQMLVVGDLLQNLSENDRISPILAQYAELNPRQS
                     SDVFVETPDTNEAKELLTFCRKFTVPLRSALKKQGWLGKSENMQGSVSLHILFTRPGA
                     CYVGYAYNHNKSPFFMGIPRLKFPAEAPSRSTLKLEEAILTFIPQAEEKKRFNDTMVG
                     VDLGACPGGWTYQLVKRGVFVYAVDHGKMAASLHETGRIEHCPEDGFKFQPPKRKQID
                     WLVCDMVEQPIRISKLIAKWLTNGWCRETIFNLKLPMKKRYQEVQLCLNFLEEELTKH
                     GFWFKMQAKHLYHDREEITVHIAVMGQK"
     gene            complement(4260..4652)
                     /locus_tag="PXE50_001297"
     CDS             complement(4260..4652)
                     /locus_tag="PXE50_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HDL5622216.1"
                     /translation="MKNKFVAIAAFSGLFTVAFGAIASHALSAQLSPKALGWIETGIK
                     YQMFHTLAILALGLFQIANFGQNPPVCRAKAFNIIGSNWALGILLFSGNLYLLALNVP
                     TIHWLTPIGGLCFMLGWIALIYISVRKA"
     gene            complement(4759..6160)
                     /locus_tag="PXE50_001298"
                     /pseudo
     CDS             complement(4759..6160)
                     /locus_tag="PXE50_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252330.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
     gene            complement(6315..8672)
                     /locus_tag="PXE50_001299"
     CDS             complement(6315..8672)
                     /locus_tag="PXE50_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin guanine dinucleotide-containing
                     S/N-oxide reductase"
                     /protein_id="HDL5622217.1"
                     /translation="MNTALEKGKFVFLDKPKNTITTAAHWGALNVTVENGKVVKSEGS
                     LAKNHQNELQDVVADQLYSPVRVKYPMVRKGYLEGNKDTTLRGRDKWVRISWDKAFEL
                     VSGEIQRVREQYGSESIFGGSYGWYSSGSLHASRTLLQRYLNVTGGFTNTKGDYSTGA
                     VQVIMPYVLGNIEVYAQQTSWHTIVESTELLVIWSSNPLNTLRIAWTSAEPEGIDYLA
                     KLKASGKRIICIDPVKSETCQFLEAEWLPINTGTDVALILGIAHTLITENKHDHDFLT
                     KYTVGFEQFADYVLGKADNLPKTAEWASQICDIPEEVIKTLANDFVTHRTMLMSGWGL
                     QRLQHGEQSHWALVTLAAMLGQIGLPGGGFGLNYRYSTNGLNVNSGVRLGAINAGKPN
                     PDMPFFPVSRIADALLKPNQPYDYNGQTLHYPNIKLVYWAGGNPFAHHPDTNYLVKAW
                     QQPETMIVNECYWTPTARMADIVLPATTSYERNDLTVAGDYVAKHIIPMKQVVEPQFE
                     AKNDYDIFAELAKRAGKEQAFTEGKSEMEWLKEFYQVAFEAGEKANTPLLDFEAFWAE
                     NKVLSFEAEHQNNTFVRYQDYRTDPIKHKLATPSGKIEIFSETIAKMNYEDCKGHPTW
                     FEHHEYSGKTNEAEPLALVTPHIKYRLHSQLAYSSLRQYYEVNGREPMLIHTKDAADR
                     GITSGDIVRIFNKRGQVLAGAVVTDGIIQGTVALYEGGWYDPQDLGKTDTPLCKNGNP
                     NVLTRNEGSSKLGQGNAPNTTTVQVEKYVGDAPEVTVFKAPFFSE"
     gene            complement(8808..11414)
                     /gene="acnB"
                     /locus_tag="PXE50_001300"
     CDS             complement(8808..11414)
                     /gene="acnB"
                     /locus_tag="PXE50_001300"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014391308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HDL5622218.1"
                     /translation="MENFIENYQQQVDERAALGVVPQPLSAEQTAQLVELLKNPPAEQ
                     AVFLLDLFTNRIPAGVDEAAYVKAAFLADITKGVATSPLISPAHAVKLLGTMQGGYNI
                     ETLLSALDNPELAPIAVEALSKTLLMFDNFHDVKERADQGNPFAQQVLESWANADWFT
                     SRPKLAEKLTVTVFKVTGETNTDDLSPAQDAWSRPDIPLHALAMLKNERDGIFPDENG
                     HTGPIKQLEALKEKGFPLAYVGDVVGTGSSRKSATNSVLWFMGEDIPYIPNKRAGGVV
                     LGGKIAPIFFNTLEDAGSLPIEVDVTNLNMGDVIDIYPYAGKICKHNSDEVLAEFELK
                     TEVLLDEVRAGGRIPLIIGRGLTHKARVALGLPESDVFIKPQSVSESNKGYTLAQKMV
                     GRACGVEGVRPGQYCEPRMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAA
                     YPKPVDVITHHTLPDFIMNRGGVSLRPGDGVIHSWLNRMLLPDTVGTGGDSHTRFPIG
                     ISFPAGSGLVAFAAATGVMPLDMPESVLVRFSGTMQPGITLRDLVHAIPYYAIQQGLL
                     TVEKKGKKNIFSGRILEIEGLEDLKIEQAFELSDASAERSAAACTIKLNKEPIIEYLN
                     SNITLLKWMIAEGYDDKRTLERRIANMQAWLDNPELLEADENAEYAAVIEINLDEIKE
                     PIVCVPNDPDDARLLSQVQGDKIDEVFIGSCMTNIGHFRAAGKLLSQAQGELPTKLWI
                     APPTKMDAGLLTEEGYYSIYGKSGARVEMPGCSLCMGNQARVANNANVVSTSTRNFPN
                     RLGQGANVYLASAELAAVSALLGKLPTPQEYLDYMNNLQKDKDDIYRYMNFDQINSYV
                     KKADNVIVQVAV"
     gene            complement(11434..12681)
                     /gene="icd"
                     /locus_tag="PXE50_001301"
     CDS             complement(11434..12681)
                     /gene="icd"
                     /locus_tag="PXE50_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010907250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HDL5622219.1"
                     /translation="MQTQVQIPQGETIQLNQDGSLQVPDNPIIPFIEGDGIGVDVTPA
                     MKAVLDAAVEKAYQGKRKIAWMEIYAGEKANKLYGENTWLPDETLELIRQYHVAIKGP
                     LMTPVGGGIRSLNVAMRQGLDLYNCLRPIRYYDGTPSPVKHPELVDMVIFRENSEDIY
                     AGVEWVAGSPEANKVIEFLQQEMGVKKIRFTEDCGIGIKPVSKQGTQRLVRAALQYVI
                     DNNRKSLTLVHKGNIMKFTEGAFKEWGYQVAEEFGAKLIDKGPWMSLTNPKTGEEIII
                     KDSIADAFLQEILLHPTEYDVIATLNLNGDYISDALAAQVGGIGISPGANIGFEAAIF
                     EATHGTAPKIAGQNKGNPGSLILSGEMMLRHLGWVEAADLVVKAVSKTIANKTVTFDF
                     AEMLEGVTLRSTSEFAQDIIANM"
     gene            12915..14195
                     /locus_tag="PXE50_001302"
     CDS             12915..14195
                     /locus_tag="PXE50_001302"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005762304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HDL5622220.1"
                     /translation="MSKATLTLETGEKLELNMQKGTLGYQTIDIQPFLKHKLFAYDPG
                     LVSTAVCRSNITYVDGDEGVLLYRGYPIDQLAKHSDYLEVGYMLLFGERPTKEEYKDF
                     VQLIKKHTLVHEQLTKFFSGFRRDSHPMAVMCGVSGALAAFYHDAIDVNNQAHRELTA
                     IRLLAKIPTLAAMCYKYSIGQPFMFPQNHLSYAGNFLYMMFATPCEPYEVNPVLERAL
                     DRIFILHADHEQNASTSTVRTAASSGANPFACIAAGIASLWGPAHGGANEACINMLKE
                     IGTVDRIPEFIARAKDKNDPFRLMGFGHRVYKNYDPRAKVMRETCHEVLKELNIDNPL
                     FEVALELERIALSDPYFIEHKLYPNVDFYSGIVLKAIGIPTSMFTVMFALARTVGWIA
                     HWKEMYLQGNIKIVRPRQIYTGHTKRDFEPMDKS"
     gene            complement(14268..15497)
                     /locus_tag="PXE50_001303"
     CDS             complement(14268..15497)
                     /locus_tag="PXE50_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622221.1"
                     /translation="MFQAEPKNGKVTVEVLKQYLIDELKIDEEEIAIVIGNQHELDNI
                     DLFNPQCKINYIITVEALKEGWDCPFAYIFCSVQNVSSSKEAEQLLGRVLRMPYAKHR
                     QIEDLNRAYAPLSSKSFGETARNLQDKLIGMGFEALEVAEMLRIPQQENWIGNEGDLF
                     YTPTTVLALTQLPEMSDLSEAKRSQLKITEQEGHILVQVKGNLSEKLEKALIRTATGK
                     KKEQIEQQLQIHQNRVEILSSPAEKGEIFKVIPQLCMNIQGEFDLADSQVLLDYQSWN
                     LLDYPAKLDGFRLQENSQSFEIDVEDKRVSYHFNQQQLSFSDDWLRNPVKRGFSLPLA
                     HQNFYPDFIVELIDGRILIVEYKGEQLKSNEDSKEKALIGNLWEKLSQGKGLFIMAVK
                     SDENGQDVRTQLLNKLA"
     gene            complement(15464..16453)
                     /locus_tag="PXE50_001304"
     CDS             complement(15464..16453)
                     /locus_tag="PXE50_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HDL5622222.1"
                     /translation="MKLKNYQNEALNRVSHYFSACLQSDAKTAFSQIQPEYSYKIPSE
                     HSNLRDVPYVCVRIPTGGGKTLLASHSIARIAKQYLDCDFPVTLWPVPSRTIKTQTTE
                     ALKNPQHPYRAVLDKTFNREVMVIESEDFDLLRPQDFGNKAIVIVSTIQNFRVENQDG
                     RKIYAFNEKLTAHFERLLPHIQANLEKISTTDLQENGLTSKQTGKIKCSFANLLRAYQ
                     PLVIVDEAHNARTSLSFDVLSQLSPSAILEFTATPNTDRKAGSNVLYHVSASHLKAEE
                     MIKLPIVLTEHHNWQQAIDGAVINRGALAQKAQYESEYVRPIYCFKLSRKTAK"
     gene            complement(16469..16987)
                     /locus_tag="PXE50_001305"
     CDS             complement(16469..16987)
                     /locus_tag="PXE50_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HDL5622223.1"
                     /translation="MNRRYIGIEIGEHAKTHVVPRLKKVIEGEQGGISKAVNWQGGGS
                     FRFCELGEEVFDAFGSLNPNIRFDDLAAHIWYLENHFPLQKNSEKSPLVGTFNGKAYY
                     LLYNGILGDKRPQSGNVLTRKLMAELPYFAEFIQQGMDIVVYGEACRLGEVQLAEKKI
                     TFKQIPYDVMSR"
     gene            complement(16997..17068)
                     /locus_tag="PXE50_001306"
                     /pseudo
     CDS             complement(16997..17068)
                     /locus_tag="PXE50_001306"
                     /inference="COORDINATES: protein motif:HMM:NF013704.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(17075..>17520)
                     /locus_tag="PXE50_001307"
     CDS             complement(17075..>17520)
                     /locus_tag="PXE50_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HDL5622224.1"
                     /translation="YPLYNAGNSREILVFPPRSIKFKKHSDGLYKPTIFSKKTSSITL
                     ISELIIEDQWNKNTVEIEGEWRYSQKSIDEQLKNGDYYIIKSLDFRPRRVFERSAEKK
                     KIHNLISRAHYDMATNEDSASEHLELFGEDIAEDSFDYPKPEKLI"
BASE COUNT         5049 a         3946 c         3264 g         5261 t
ORIGIN      
        1 tttgaacaaa cgaagcgaca gcgttagcaa aaacttaaaa tgatgtacgg atttaaaaat
       61 ctgttcgttt gcttgtttta taagcaaact aatttcgcat aattattatt atgttaaata
      121 gatagttaaa ataacacatt taattaaatc ttttcgtgtt tctctcctcc tttattaaaa
      181 aagaaaacgg tcagattggt aaaatctata cctaatatga ccgcttgtga atacaaaaaa
      241 attacttcaa ttacttcaac tgtttaaagg cttgcagtaa atcagcttta atatcttcaa
      301 cgtgttctaa accaacggaa aaacgcagta aattattcgt aatgcctcgt gtaatacgtt
      361 ctgcttccgg aatatccata tgggtttgtg ttgcaggata agtaataaaa ctttctgcac
      421 cgcctaaact ttccgcaaag gtaatcaatt taattgcctt gagaaatttc gctacccact
      481 cttctttttg taaacggaaa gataacatac cacttttgcc tgaatataac acgctgtcaa
      541 tttcaggttg ctctgctaag aatttagcca gttcggtggc attagactga tggcgttcca
      601 ttcgtaatgc caaggttttc ataccacgca cggcaaggta agaatcaaat ggcgacagca
      661 ctgcaccggc acagttttgg aaatagaata aacgctcggt caaattctgc ccgtttactt
      721 tggtagcatc agaatctttc gcaacaatta agccggctaa cacatcatta tgccccgaaa
      781 gatacttggt cgcactgtga atcacaatat cagctccgtg ctcaatcgga cggaataacg
      841 ctggggttaa gaacgtatta tcaacgatca acattaaatt gtgttttttc gcaattttag
      901 caatggcagc aacgtcgcac tcctccatca atggatttga cggcgtttcc acgaaaatcg
      961 ccttagtatt cggtgtaata gctgcttcaa tcgctgctaa atccgctgta ttaacataaa
     1021 ccggctttaa tgtgccgtga tttttgtggc taaaatcaaa caagcggtaa gaaccaccat
     1081 aaacatcgct ggaaataatc cattcatcag gtgctttaaa taatgacatt actagctgaa
     1141 tcgctgccat tccagatgcc atcgcaaaac cggcatcacc gccttctaaa tccgcaatcc
     1201 cctgctctaa tacagctcga gttgggtttt tggtacgggt gtaatcccag ccggtagatt
     1261 cgcctaagcc atcacgcccg taagcagttg ataagataat cggcattgcc accgcccctg
     1321 tacgaggatc agttctgtta ccgatttgca ctaatgtggt ttcaatatta ttgaattttg
     1381 tcattgttat tatccttcaa ttacagatta tttagatcca atacgtctgt catatcaaac
     1441 aagccatttt gtttgccatt taaccatttt gcagcacgca ctgcgccatt ggcaaacgtc
     1501 attcgactag aggctttatg tgcgatttcg acacgttcgc cttcatcagc gaaccataca
     1561 ctatgctccc ctacaacatc accggcacga atagtagcaa agccgatttc atcacgtttg
     1621 cgttcgcctg taataccgtt acgttcaaat acgccatgag ttttcaagtc acgcccaaga
     1681 gttttggcaa tatgttctcc cattgataaa gccgtacctg atggtgcatc aactttatgg
     1741 cgatggtgtg cctcaatcac ttcaatatca caataatcgc ccattacttt tgctgctttt
     1801 tcgagcagtt taaacaccag attcacccca acgctgtagt ttgaggcaaa aacgataccg
     1861 attttttcac tcgctgcttt gattgcagct ttacctgcat catcaaaacc ggttgtgcca
     1921 atcaccattt gtttatgatg agccacacaa atatccaaat gttctagcgt gccttcaggg
     1981 cgagtaaaat caattagtaa atcaaaacct gctacatttt gggcgacatc atcagaaatc
     2041 accacaccta atgtaccaac cccggctact tcaccagcat cactacctac taatgatgaa
     2101 cctttacgct caaaagcaga ccctaattct acgccttgtg cattatggac ggcttgaatt
     2161 aattgacgcc ccattcgccc accggcaccg acgattccaa tttttaatgt catatttgtt
     2221 cttccttttt atatttgttt tttacaagcg gttacatttt taattaattt tgcaaatagc
     2281 tttctgatgg caatttaaaa ggtgggtgag aagtaaaatc aacaatttga ataaagtttt
     2341 cacctttcac ataatgtaaa atatactcag aagtataatt accaaatcct tgactggtat
     2401 catattctgg aatgccgata tgataatgcc ataaagaata tttttgtgct ttagccacct
     2461 tctctgccca ataaggatca ttcgttggca catcatcaga acttttattt cgaccagcta
     2521 gattttccaa tccataaatt tcaacgtgtt gtttaaactg caggattttg actagatctt
     2581 tttcaggcaa atattgcaat tcggctgaaa tttttgtacc aaataaaact ttaatgccca
     2641 tttgcaacac ctttcaacca gtttctaaat tcattaacat tcgttatatc tttaggcact
     2701 tcgtgaaaag tatcatttaa ccgctctttc attcgctcta agtcaaaatt aaatgcggtt
     2761 gcttgagaga gttgctgttc aattttgcga atattggact tcatattatc caatatagcc
     2821 attgtccttg agccatcagt aaaatactgt tgggtatcga aaatcaccac cttattttga
     2881 tttaggtatt ttttgaaatc gtttaaatca atttcagccc aaaagtttgg atttttttcg
     2941 atagtttcaa tacaggcaat taataattga tttgccattg taatacgaaa atttaacaat
     3001 gagatttgct gctctgttgc aggtttatca tcagctgcga aatcaaatgc cggataaatc
     3061 actgcaagcg tgtcagccat agataagggt aaatttttca tcatctctcc ttacggaaga
     3121 agttgtcatt atctactgga ttacttaaaa aaacaactta ttcattttat gctatttttg
     3181 ccccatcacc gcaatatgta ccgtaatttc ctcacggtcg tggtagaggt gtttagcttg
     3241 cattttgaac caaaacccgt gtttcgttag ctcttcttcc aagaaattga ggcatagttg
     3301 cacttcttga taacgttttt tcatcggcag ttttaggttg aaaatcgttt ctcgacacca
     3361 accgttagtc agccattttg caatgagttt cgagatacga atcggctgct ctaccatatc
     3421 acaaaccagc caatcgattt gtttacgctt aggcggttgg aatttaaacc catcttcagg
     3481 gcaatgctca attcttccgg tttcgtgtaa acttgctgcc attttgccgt gatcgactgc
     3541 atagacaaaa acaccacgtt tgactaattg ataagtccaa ccacccggac aagccccaag
     3601 atcgacccct accatcgtat cattaaagcg ttttttctcc tctgcttgcg gaataaaagt
     3661 taaaatcgcc tcttctaatt taagcgttga gcgactaggt gcctcagccg ggaattttaa
     3721 acggggaatc cccataaaaa acggcgattt attatggttg tacgcatagc ccacatagca
     3781 agctcccgga cgagtaaata aaatatgcaa gctcacacta ccctgcatat tttccgattt
     3841 ccccaaccaa ccttgttttt tcaatgccga ccgtaatggc acagtaaatt tacgacagaa
     3901 agttaataat tctttcgctt cgttggtatc cggtgtttcg acaaatacat cagaactttg
     3961 gcgaggatta agttcggcat attgggctaa aatcggcgaa attcgatcat tttcagacag
     4021 attttgcaac aaatccccaa caaccaacat ttggcgaaca aaaataagct gttcaaactt
     4081 taacgcttgg gctaatcgat ctgcttcccc tgcttgatag cactcaaaaa tcacatagcc
     4141 actattttct ttaaggttgg caaagccaaa aatgccctgt tgtgcagctt tatccgtgat
     4201 ttcgcctgct acctcttttt caaaccctgc tcggcaatat aaggctaatt tattgaacat
     4261 taggcttttc tcacactgat ataaattaac gcaatccaac caagcataaa gcagagacca
     4321 ccaataggcg taagccaatg aatagtcggc acatttaacg ccagtaagta caggttgcca
     4381 ctaaaaagca gaatgcctaa cgcccaattg cttccgatga tgttaaaggc tttggctcta
     4441 caaacgggtg gattttgccc aaaatttgca atttggaata aacctaaagc taaaatggca
     4501 agggtgtgaa acatttgata tttaatcccc gtctcaatcc agcctaaggc tttaggcgat
     4561 aattgagccg ataatgcgtg gctggctatc gccccaaatg ccacagtaaa taagccgctg
     4621 aatgcggcaa ttgctacaaa tttgtttttc ataagttgaa gataggtatg atgttagatg
     4681 gcttactata tcatattatc gaaaccaaca agcggtgaaa ttttgcaaaa aaattacaaa
     4741 aaatcaccgt ttgtatgctt aatggttcaa gataatatcc acatcttccg atttatcgtg
     4801 aaccccaaat ctatctacta aggttttgct ggcctcattt aatccgataa tttctacctc
     4861 aacatcactt tttcgatatt tcaacacaac tttatctaac gctgaaactg ccgttacgtc
     4921 ccaaaagtga gcgtgggtta aatcaatgtg gacttttttc agttctgaac gggtaaaatc
     4981 aaattgtgcg ataaaatcat cagatgaggc aaaaaatact tgcccgataa catcataacg
     5041 caattcctct ttctctatag cacttgtttt aaccgccata taacgtccaa ttttattcgc
     5101 aaagaataat gccgagagca acacgccgga aaatacacca agggctaagt tatgtgtata
     5161 aaccacaatt gcaacagtga ctaacatcac tacattaaag ccgattgggt gcgtttttag
     5221 ctcttttaag gaatgccaat taaaggtgcc gatagagacc ataatcatca ctgcaactaa
     5281 tgcagccatc ggaatcactc tcaaaatatc gctcaaaaag accacaaaaa tcagtaataa
     5341 tattggcaat gccctgccct ttacattcac ggtttttatc gctgtctgtc tctgtcattt
     5401 catcaacaat cgttgccgtc attaaagatt ccaataaccc tactgcggcc aagctgaaag
     5461 aataaggcaa aataatccat aaggtgtcta aattaagcgg aatatcgggt aataaaaaca
     5521 ccggtaaggt atcgggtaat tgccccatat ccccaacggt acgaacatca atgccttgcc
     5581 ataatgtgaa aagtgttaaa gcaataatgg tcactaatgg tgagggaatg atttttccaa
     5641 tcaccggtac ataaggaaaa agataaatga tagcaagccc tgctaccacc agtgcataag
     5701 tatgccaagt tgtattttgt aactcaggta gttgtgccat aaaaattaaa atggcaagtg
     5761 cattaacaaa cccaatcact acggctcgtg ccacaaaccg cataagcgag ccgagtttta
     5821 accaaccggc aataatttgc aacacgcctg ttaataaggt ggccgctagc atatattgta
     5881 aaccgtgatc cctcactaag cctgctaata ccagagccat tgcaccggtt gctgcagaaa
     5941 tcatcgccgg tctgccgccc acaaaactga taattactgc aatacaaaat gaggcatata
     6001 aaccaatttg tggatcaacc cctgcaataa ttgaaaatgc tatggcttct ggaattaacg
     6061 ccaaagccac cactaaacca gagagaacat cacctcgtac atttgaaaac cattgttgtt
     6121 taattaccgt aggcgaaaat tgctgaaata aagttgtcat tattaccctt aaataaaaag
     6181 aaaagccgag caaagtcggc taaaaatgag gcgagagagt agcaaattag tgaaaagtcg
     6241 tcaaataaac aagcggtctt ctttcgctct ttttttgcaa aaaatagtag aaaaatgacc
     6301 gcttggatta attgctattc actaaaaaaa ggggctttaa acaccgtcac ttcaggtgca
     6361 tctcccacat atttttccac ttgaaccgtg gtagtgttcg gtgcattgcc ctgcccgagt
     6421 tttgatgaac cctcattacg ggttagcaca ttcgggttgc cgtttttgca tagtggagta
     6481 tctgttttgc ctaaatcttg cgggtcatac caaccacctt cgtataacgc tactgtgcct
     6541 tgaatgatgc catcagtcac cactgctcct gccaacacct gccctcgctt gttaaaaatt
     6601 cgcacaatat caccgcttgt aatgcctctg tcagcggcat cttttgtgtg aattagcatt
     6661 ggttctctgc cgtttacctc gtaatattga cgtaatgagg agtaagcaag ctggctgtgt
     6721 aaacggtatt taatatgcgg tgtaactaat gccaacggct cggcttcgtt ggttttgcct
     6781 gaatattcgt gatgttcaaa ccaagtcggg tgtcctttac aatcttcata attcatcttg
     6841 gcaatggttt cggagaaaat ctcaattttg cctgatggcg ttgccaattt gtgtttaatc
     6901 ggatcagtac gataatcttg atagcgaacg aaagtattat tttgatgttc tgcctcaaag
     6961 ctcaacactt tattttccgc ccaaaatgcc tcgaaatcca gcaatggcgt attagctttt
     7021 tcccccgcct caaaggcaac ttggtaaaat tccttaagcc attccatttc gcttttgcct
     7081 tcggtaaatg cttgttcttt accggctcgt ttcgctaatt cggcaaaaat atcgtaatca
     7141 ttcttcgcct caaattgcgg ttcaaccacc tgtttcatcg ggataatatg ttttgctaca
     7201 taatcaccgg caacggtgag atcgtttcgc tcgtagctgg tggttgcggg caatacaata
     7261 tctgccattc gagcggtcgg tgtccagtaa cattcattga cgatcatcgt ttccggctgt
     7321 tgccacgctt tcactaaata gttggtatcc gggtggtgag caaacggatt accccccgcc
     7381 caatagacta atttgatgtt cgggtaatgt aatgtttgcc cgttgtaatc ataaggctga
     7441 ttcggtttga gcaacgcatc ggcaattcga gacaccggga aaaacggcat atcggggtta
     7501 ggtttacctg cattgattgc ccctaaacga acaccggaat taacatttag cccattggta
     7561 gaataacgat aatttaagcc gaaaccgccg cccggcaagc caatttgccc gagcatagcg
     7621 gcaagagtca ctaacgccca gtggctttgc tccccgtgtt gcaggcgttg caagccccag
     7681 ccggacatca acattgtgcg gtgagtaaca aaatcatttg ctaaggtttt aatcacctcc
     7741 tccggaatgt cacaaatttg gctcgcccac tctgctgttt taggtaaatt atctgctttt
     7801 cctaacacat aatcagcaaa ttgctcgaaa ccaacagtat atttagttaa gaagtcgtga
     7861 tcgtgcttgt tttcagtaat aagggtgtgg gcgatcccta aaatcagtgc aacatccgtg
     7921 ccggtattaa taggcaacca ctctgcctct aaaaattgac aggtctcgct tttcaccggg
     7981 tcgatacaaa taatccgttt accgcttgct tttaatttgg cgagataatc aatcccctcc
     8041 ggttcggcag aggtccacgc aatgcgaagt gtattcagtg gattagacga ccaaattacc
     8101 aataattctg tgctttctac aattgtgtgc caactggttt gttgagcata cacctcaata
     8161 ttgcctaata cataaggcat aatcacttgc accgcaccgg tggaataatc gcctttagta
     8221 ttggtaaagc cgcctgtgac gtttaaataa cgttgcaaaa gcgtgcgaga ggcgtgcagt
     8281 gaaccactgc tataccagcc gtaagaaccg ccgaaaatgg attcgctgcc atattgctct
     8341 cttacccgtt ggatttcgcc ggaaaccagc tcaaaggctt tgtcccaaga gattctcacc
     8401 cacttatctc gccctcgcaa agtggtgtct ttattccctt ccaagtagcc tttccgcacc
     8461 atcggatatt tcacccgaac cgggctatag agctgatccg ccaccacatc ttgcaattcg
     8521 ttttggtgat ttttcgctaa actgccctct gatttcacca cttttccgtt ttccaccgtt
     8581 acatttaatg caccccagtg ggcggcggtg gtaatggtat ttttcggttt atccaaaaag
     8641 acaaacttcc ctttttctaa tgctgtgttc atttaaatta atgccttttc tgttacaaaa
     8701 ttgagaggaa tttactggat taagccaaaa gttgcaacca caagcggttg tttttagcca
     8761 aaaatttgca aaacaaaacc cacctaaaaa ggtgggcttc aaggaagtta aacggcaact
     8821 tgaacgatta cattgtccgc ttttttcaca taactattga tttggtcaaa gttcatatag
     8881 cggtaaatat cgtccttatc tttctgcaag ttattcatat agtctaggta ctcttgcggt
     8941 gtcggcaatt tacccaataa cgcagaaact gcggctaatt ctgctgaggc taaatacaca
     9001 tttgcccctt gccctaaacg gttcgggaag tttcgggtag aggtagaaac cacattagca
     9061 ttatttgcca ctcgggcttg gttacccata cagagagaac agcccggcat ctctaccctt
     9121 gctccgcttt tgccgtaaat gctgtaatag ccctcttcgg tcagcaagcc tgcgtccatt
     9181 ttagtcggcg gagcaatcca taatttagtc ggcaattcgc cctgtgcttg gcttaacagt
     9241 ttacctgccg cacggaaatg cccgatatta gtcatacaag aaccaataaa gacttcatca
     9301 attttatcgc cctgtacttg agaaagcagg cgagcatcgt cagggtcatt cggtacgcac
     9361 acaatcggct ctttgatttc atctaagttg atctcaatca ctgcggcata ctccgcattt
     9421 tcgtctgcct ctaaaagctc cggattatcc aaccacgctt gcatattggc gatacggcgt
     9481 tctagcgtgc gtttatcgtc atagccttcc gcaatcatcc attttaaaag cgtaatatta
     9541 gaattcagat actcgataat cggctctttg ttgagcttga tggtacaggc tgcagcagag
     9601 cgttcagcag aagcatcaga aagctcgaag gcttgttcga ttttcagatc ttccaaccct
     9661 tcaatttcta aaattcgacc ggagaaaata tttttcttac cttttttctc caccgtcagc
     9721 aagccttgct gaatggcata atacggaata gcgtgaacca gatcccgtaa ggtaatgccc
     9781 ggttgcattg tgccggaaaa acgcaccaag accgattccg gcatatctaa cggcatcacc
     9841 cctgttgccg cagcaaaggc aactaagccc gaaccggcag ggaatgaaat cccgattggg
     9901 aaacgggtgt gggaatcgcc gcctgtaccg acagtatccg gcaataacat acggtttagc
     9961 caagagtgaa tcacgccatc acccgggcga agtgacacac cgccacggtt cataataaaa
    10021 tcaggcaaag tgtggtgggt aattacgtcc accggtttcg ggtaagcggc agtatggcag
    10081 aacgattgca tcacaagatc tgccgagaag cctaaacagg ctaaatcttt cagctcatct
    10141 cttgtcattg gtcctgtggt atcttgtgaa ccgacagacg tcattcgagg ctcgcaatat
    10201 tgccccggtc gaacgccttc tacgccacaa gctcgcccta ccattttttg agcaagggtg
    10261 tagcctttgt tactctctga aaccgactgc ggtttaataa atacatcact ttcaggcaag
    10321 ccaagtgcta ctctggcttt atgggtcaaa ccacgtccga taatcagcgg aattcgcccg
    10381 cctgcacgca cttcatcaag caatacttcg gtttttagct caaattcggc taagacttca
    10441 tcggagttgt gtttgcaaat tttgcctgca taagggtaaa tgtcgattac atcgcccata
    10501 ttcaggttgg ttacatccac ttcgatcggt aaagaaccgg catcttctaa tgtgttaaag
    10561 aaaatcgggg caattttacc gcctaacacc accccaccgg cacgtttgtt tggaatgtaa
    10621 ggaatatctt cccccataaa ccaaagcacg gagttggttg cggatttacg agaagagccg
    10681 gtgccgacta catcaccgac ataggctaac gggaaacctt tttcttttaa tgcttccagt
    10741 tgcttaatcg ggccggtatg accgttttca tcggggaaaa taccgtcacg ttcatttttc
    10801 agcattgcta atgcgtgaag tggaatatca gggcgagacc aagcgtcttg agccggggaa
    10861 agatcatcgg tattggtttc gcctgtgact ttaaataccg ttaccgttaa tttttcggca
    10921 agtttcgggc gagaggtaaa ccaatcggca ttcgcccaag attccaatac ttgttgtgca
    10981 aacggattac cctgatctgc ccgttctttt acatcgtgga aattatcaaa catcaataat
    11041 gttttagata aggcttctac cgcaatcggt gcaagctcag ggttatccaa cgcagacaat
    11101 aaggtttcaa tgttataacc accttgcatt gtgccgagta atttcactgc gtgagcaggc
    11161 gaaatgagcg gcgatgtggc aacccctttg gtaatatcgg ctaaaaaggc ggctttaaca
    11221 taagcggctt catcaacacc tgccggaata cgattggtaa aaagatccaa taaaaagacc
    11281 gcttgttcag ccggtgggtt tttcaataat tcaaccagtt gagccgtttg ttccgcagaa
    11341 agtggctgag gcacaacacc cagtgccgca cgttcatcaa cctgttgttg ataattttct
    11401 ataaaatttt ccatcatcat tccctctcca actttacata ttggcaataa tgtcttgtgc
    11461 aaattctgag gttgagcgta gagttacccc ctccagcatt tccgcaaaat caaaggtgac
    11521 agttttattg gcaatggttt tagacaccgc ttttaccact aaatcagccg cttcaaccca
    11581 acctaaatgg cgtaacatca tttccccact taaaattaat gacccaggat tgcctttatt
    11641 ttgccctgca attttagggg ctgtgccgtg tgtggcttca aaaatagccg cttcaaaccc
    11701 aatattcgct cccggtgaaa taccgattcc gcctacttgt gcggctaaag catcagaaat
    11761 atagtcgccg tttaggttca gtgtagcaat cacatcatat tcggttgggt gtaacaagat
    11821 ttcttgtaaa aaggcatcgg caatgctgtc ttttataatg atttcctcac cggttttcgg
    11881 attagtcaag ctcatccaag ggcctttatc aattaatttt gccccaaatt cttccgcaac
    11941 ttggtagccc cactctttaa atgctccttc ggtaaatttc ataatgttac ctttatgcac
    12001 aagcgtgagc gatttacggt tgttatcaat tacatattgc aatgcagcac gcaccaagcg
    12061 ttgtgtgcct tgcttagaaa ccggcttaat tccgataccg caatcttcgg taaagcggat
    12121 ttttttcacg cccatctctt gttgtaaaaa ttcgatcact ttattggctt caggcgaacc
    12181 ggcaacccat tctacaccgg cataaatatc ttccgagttt tcacggaaaa tcaccatatc
    12241 caccagctca gggtgtttaa ccgggcttgg cgtaccgtca taataacgaa ttgggcgtaa
    12301 gcagttgtat aaatctaatc cttgacgcat cgccacattt aaagaacgaa taccgccacc
    12361 caccggtgtc attaaaggac ctttaatcgc cacgtgatat tggcggataa gctctaaggt
    12421 ttcatccggc aaccaagtgt tctcaccata taatttattc gccttttcgc ctgcgtaaat
    12481 ttccatccaa gcaatttttc gcttgccttg ataggctttt tctaccgccg catctagcac
    12541 tgctttcatt gcaggagtaa catcaacacc gatgccgtca ccttcaataa atggaataat
    12601 cggattatcc ggaacttgta aagaaccgtc ttggttcagt tgaatagttt cgccttgtgg
    12661 aatttggact tgtgtttgca ttgattttac ccccgtaatg acgaaaaagt agtgacgaaa
    12721 aatgaatgtt gacaatcagc caacaatgga ttaactataa acagtaaatt tctaaatgta
    12781 aataaagcaa aatgggctga gagagaattt gtgatctaac gcacatttat gtaaataaaa
    12841 tgtaaaaaat cgttgtgatt cttttggaaa tcatctagtt tatcttataa atctcaaata
    12901 aataggagta agctatgtca aaagcaacat taacactcga aacaggtgaa aaacttgaac
    12961 tcaatatgca aaaaggaacc ttagggtatc aaacgattga tattcagcct ttcttaaagc
    13021 ataagttatt tgcttatgat cccggattgg tttcgaccgc tgtatgccga tccaatatca
    13081 cttatgttga tggcgatgaa ggggttttac tctatcgagg ctacccgatt gaccaattag
    13141 ccaaacattc tgattactta gaagtcggtt atatgctgtt attcggcgaa cgccctacca
    13201 aagaagaata caaagacttc gttcaactca tcaaaaaaca cactcttgta cacgaacaac
    13261 taaccaaatt cttctccggt ttccgccgag attcgcaccc aatggcggtg atgtgtgggg
    13321 taagtggagc tttggctgcc ttctaccacg acgccattga tgtaaacaac caagcccacc
    13381 gtgaattaac cgccattcgt ttgttagcca aaatcccaac ccttgcggcg atgtgttata
    13441 aatactctat cggtcagccg tttatgttcc cacaaaacca cttatcttac gccggcaact
    13501 tcttatatat gatgtttgcc actccttgtg aaccgtacga agtgaaccct gtgttagagc
    13561 gtgcgttaga ccgaattttc attttacatg cagaccacga acaaaacgct tcgacctcaa
    13621 ccgtgcgaac cgccgcttca tcaggtgcaa acccatttgc ttgcattgct gccggtattg
    13681 cctctctctg gggacctgca cacggaggag caaatgaagc ctgtatcaat atgttgaaag
    13741 aaatcggcac tgtggatcgc attcctgaat ttattgctcg agccaaagat aaaaatgacc
    13801 cgttccgctt aatgggcttt gggcatcgtg tctataaaaa ctacgaccct cgtgcgaaag
    13861 taatgcgtga aacctgccac gaagtgttaa aagaactgaa cattgataac ccactatttg
    13921 aagtggcatt ggaattagaa cgtattgcgt taagcgaccc ttatttcatt gagcataaac
    13981 tttatccaaa cgtagatttc tactccggaa tcgtgctaaa agccatcggt attccaacct
    14041 caatgtttac cgtaatgttt gccctagcca gaaccgttgg ctggattgct cactggaaag
    14101 agatgtatct ccaaggcaat atcaaaatcg ttcgtccacg tcaaatctac accggacata
    14161 ctaaacgtga ttttgagcca atggataaat cataagattg gcaaaaaatc gaaaaatttt
    14221 aaccgcttgt ttccacaagc ggttatattt tgcataaaat ttgcaaatca ggctaattta
    14281 tttagcagtt gtgttctaac atcttgacca ttttcatcgc tttttacagc cataataaat
    14341 aagccttttc cttgacttaa tttctcccaa agattgccaa ttaaggcttt ttctttagaa
    14401 tcttcattac tttttaattg ttccccttta tattccacaa ttaaaattcg accatcaata
    14461 agctctacaa taaaatcagg gtaaaaattc tgatgagcta atggtaaaga aaaccctctt
    14521 tttacaggat ttcttaacca atcatcagaa aaactcagtt gctgctgatt aaaatggtaa
    14581 gaaacccgtt tatcttccac atcaatttca aaactttggc tattttcttg taatctaaat
    14641 ccatcaagtt tggctggata atccaataaa ttccaacttt ggtaatctaa tagcacttgt
    14701 gaatcagcta agtcgaattc gccttgaata ttcatacaca gttgaggtat tactttaaat
    14761 atttcccctt tttcggcagg agaagataat atttcaactc tattctggtg aatttgtaac
    14821 tgttgctcaa tttgctcttt tttcttacct gttgcagttc gaatcaacgc tttttctaac
    14881 ttttcactta aattaccttt tacttgcact aaaatgtgac cttcttgctc ggtaatttta
    14941 agttgagaac gttttgcttc gcttaaatca gacatttcag ggagttgcgt taatgctaaa
    15001 actgttgtcg gtgtatagaa taaatctcct tcgtttccaa tccaattttc ttgttgtggg
    15061 atacgaagca tttcagctac ttctaatgct tcaaacccca ttccaatcaa tttatcttgt
    15121 aaattacgag ccgtttcgcc gaacgactta gaggaaagcg gagcataagc acgatttaaa
    15181 tcttcaattt gacggtgttt agcataaggc attcgcaata ctcgccctaa tagctgctcc
    15241 gcttccttgc tagaggaaac attttgtact gagcaaaaaa tataagcaaa agggcaatcc
    15301 cacccttctt ttaatgcctc aaccgtgatg atgtaattga tcttgcattg tggattaaat
    15361 aaatcgatat tatctaattc gtgttgatta cctatcacaa tggcaatctc ttcttcatca
    15421 atttttaact catcaattaa atactgtttt aagacttcta ctgttacttt gccgtttttc
    15481 ggctcagctt gaaacaataa atcggacgaa cgtactcgct ctcatactgt gctttttgtg
    15541 ctaatgctcc tctattgatt acagccccat ctattgcttg ttgccagttg tgatgttcgg
    15601 tcagcacaat aggcaatttg atcatctctt ctgcttttag atggcttgcc gaaacgtgat
    15661 acaacacatt acttcctgct tttctatctg tgtttggcgt agcagtaaat tctaaaatag
    15721 ctgatgggga aagttgagat agcacatcaa aagagagtga agtccgagca ttatgtgctt
    15781 catcaacaat gaccaaaggc tgataagctc gcaacaaatt tgcaaaagaa cacttaattt
    15841 tgcccgtttg tttggaggtt aaaccgttct cttgtagatc agtagtggaa atcttttcta
    15901 aatttgcctg aatatggggt agtaaacgct caaaatgagc tgttaatttt tcattaaaag
    15961 catagatttt tcgcccatct tgattttcta cccgaaaatt ttgaatagta gaaacgatta
    16021 caatcgcctt attaccaaaa tcttgtgggc gaagtaaatc aaaatcttca gactcaataa
    16081 ccattacttc tcggttaaaa gttttatcaa gtactgcacg gtaagggtgt tgcggatttt
    16141 ttaatgcttc tgtagtttgg gttttaattg tacgagaagg cactggccac aaggtaaccg
    16201 ggaaatcgca atccaaatac tgctttgcaa tacgagcaat actatgcgag gctaacaacg
    16261 ttttaccgcc accagttgga attcgtacac aaacataagg cacatcacgc aaattactgt
    16321 gttcacttgg gatcttgtaa ctatattcag gttgaatttg gctaaatgcg gtttttgcat
    16381 cagattgcaa acaagccgaa aaatagtggc tgacacggtt taatgcctca ttttggtaat
    16441 tttttaattt catttttttc tcctactatt aacgagacat tacatcatat ggaatctgtt
    16501 taaatgtaat tttcttttca gctaactgca cttctcctaa acggcacgct tcgccatata
    16561 ccacaatatc cattccctgt tgaataaatt cagcaaagta tggtaactcc gccattaatt
    16621 ttcgtgtcag aacattacca ctctgcggac gtttatcgcc taaaattccg ttatataaca
    16681 aatagtaggc tttgccgttg aaagtgccga caagcggtga tttttcgctg tttttttgca
    16741 aagggaaatg attttctaaa taccaaatat gggcggctaa atcgtcaaaa cgaatgttcg
    16801 gattaagtga accgaatgcg tcaaatactt cctcgcctaa ctcacaaaag cgaaacgatc
    16861 caccaccttg ccaatttact gcttttgaaa taccgccttg ctcaccttca attacttttt
    16921 tcaaccgtgg gacaacatgg gttttagcat gttcgccaat ctcaataccg atataacgac
    16981 ggttcatttt atgagcaact gctgcagttg tacctgagcc aagaaagcta tcgaggacga
    17041 gatcatatgg ttcagtcgat gcttctaata caaattagat taatttttca ggtttaggat
    17101 aatcaaatga atcttctgca atatcctccc caaataattc tagatgttca ctagcagagt
    17161 cttcatttgt tgccatatca taatgagctc tgctaattaa gttatgaatt tttttctttt
    17221 ccgcacttcg ctcaaatact ctccttggtc gaaagtctaa actttttata atatagtaat
    17281 caccattttt taattgctca tcaatacttt tttggctata ccgccattca ccttcaattt
    17341 ctaccgtatt tttattccat tgatcttcaa taattaattc cgaaatcaac gtaattgaac
    17401 tcgttttttt agaaaaaatg gttggcttat ataatccatc actatgtttt ttaaatttta
    17461 tagaacgagg agggaaaact aaaatttctc ttgaatttcc agcattgtat aatggatagg
//
LOCUS       DANLZQ010000044        17479 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.044, whole genome shotgun sequence.
ACCESSION   DANLZQ010000044 DANLZQ010000000
VERSION     DANLZQ010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 17479)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17479)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17479
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.044"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..588
                     /locus_tag="PXE50_001308"
     CDS             <1..588
                     /locus_tag="PXE50_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase large subunit"
                     /protein_id="HDL5622225.1"
                     /translation="GDYLESSDAQIFRDKYQELEFKPNPDFNGPYYGLDFGFANDPTA
                     CVKCWVFDDDLYIEREAGKVRLELDETAAYLANALPDLSNYTVRADSARPESISYLKR
                     HGLPYIQPVPKWKGSVEDGVEHIKSYRKVYIHPSCTEVLKEFRLYSYKTDRLSGDVLP
                     IIIDAHNHYIDAIRYALNPLIQARGEAKQCALKVY"
     gene            601..2004
                     /locus_tag="PXE50_001309"
     CDS             601..2004
                     /locus_tag="PXE50_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4055 domain-containing protein"
                     /protein_id="HDL5622226.1"
                     /translation="MPNSISADFAALKAKTKIIDDLLGGTQKMRQAGQTYLYKMKMEE
                     EDGYKNRLNRSTLYPALRETLSQMLGRVFFNPINVEDVHKQIEPLFDDIDLEGNNLDV
                     FASRWFYAALAYGVSYCLVDFVRVENARSLAEEKAQNARPYLVHIKPQQVLGFKTAKI
                     NGKTAFTQFRYKETVTEDDGEFASKQVNYIYVYEIGRVRKYKNDEGGLSLVADMQIKA
                     QNTPLAFVPIVPFITKPIDVWGMGEPPLMELAYLNIKHWQSQSDQDNILNIARVPLLA
                     IFSDTQIKSLEIGSSAISLPKDSTMQFIEHSGSSINAGLTSLKELEDQMKTAGAKLLT
                     KTALAMTDSQAKDEAGKEISQLRHYANKFEDALDLAFEYIGHWLGIGVDEVGTSQISG
                     NIDNDLDPNASMATIIQLRNAGVISNHSTFEEAKRRGLLSDSAKWEDEQARLQAEGLS
                     DDFTNPFNSNQSENAAS"
     gene            1952..3613
                     /locus_tag="PXE50_001310"
     CDS             1952..3613
                     /locus_tag="PXE50_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HDL5622227.1"
                     /translation="MTLQIHSIRTKVKTPLAKRIAHALTDRKILQFRFDAHLRNQVWQ
                     RLTKTQKALLNRINAAGIDALPKRELDKLLKELKAEIAKNYQETTAYIQPELSGFFAV
                     EKQALTELYNDEIGYDFFNQVPSYQRKATQQATIIAGMPLESWFEKQGSELSFKFEST
                     IRQGLLEGRQTPEIAKATAELFGISRRHADTLVITAVAKVADDAHKALRDENLDLIKG
                     EMHLSTLDTRTSTVCQVRDGKMWDTDYKPIGHSLPYQRPPLHPRCRSILQLVMKDWKE
                     LGFDDVKEMPKSTRASADGQVSEKTNYEEWLSSKTPEEQDKALGKGKADLWRRGVITF
                     SDMLDQSARPLTLKELYSLKNSSSVDKMDSVELVRKKAVAVEPMITRDVVSIITASGG
                     EPAGLDFRLKSLSSLQRKIDTEIMAGVSKEQAIASIRDVIRYTAILDEQRFVEQYQKM
                     QKDLEKQGYSTIIVKNTWKSNNAYKGINTFVSTFIEKNNIIFELQYHTKQSFELKNGK
                     LHELYEKFRDLNIPLAKKSEILLEMQKLSANLKEPKNIDLIKEKK"
     gene            3613..3831
                     /locus_tag="PXE50_001311"
     CDS             3613..3831
                     /locus_tag="PXE50_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622228.1"
                     /translation="MYQYYLAQVGNEQQKLIRGMPDNLLSFSVYEPEQEDWDNKFGPF
                     WADKILISGFDAYEEISEKEAIRFIKVH"
     gene            3832..4245
                     /locus_tag="PXE50_001312"
     CDS             3832..4245
                     /locus_tag="PXE50_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HDL5622229.1"
                     /translation="MCQAEQFARQLHYGQTDKAGKPYIEHLAFVAENISTKNEETEAV
                     AWLHDSVEDTQCSINDIRHIFGDVIADAVEAITKKQGESYFCYLDRVKSNPIAKVVKL
                     ADLTHNLCLERLPKITEKDLKRAEKYKSALEYLQA"
     gene            4363..5097
                     /locus_tag="PXE50_001313"
     CDS             4363..5097
                     /locus_tag="PXE50_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622230.1"
                     /translation="MKLKLDENGHVVVENGMPVYIHDDGKEIPFDALKATQKITQLNA
                     EAKQHREAKEKAEADLKAFSGIDDPKAALEALKTVANLDAKKLIDAGDAEKVKAEIIK
                     GYDEKLAVATAQAEKLQQQLHAELIGGSFARSKYAQEHLNIPSDVVQAFFGKHFSISD
                     DGKVVAKFADGGEIFSRTRPGEKADFEEALEALVSAYPNKDAILKPSGSSGAGAGGGS
                     RSSSMPKTLSDCKTDEERIAYLQANS"
     gene            5163..6110
                     /locus_tag="PXE50_001314"
     CDS             5163..6110
                     /locus_tag="PXE50_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005643804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622231.1"
                     /translation="MAFDLQVFNKQTQLALTETVDQAIEKFNAASGGAIILQNKPAEG
                     DFDIRASFKGIAGLVRRRNVYGTGTVDAKRLEQLLDVAVKVAAGTAPIEYQPSQYKWI
                     LLNPELAAIEIGTQLAKARVADMLNTAIAGTVAAISGNTAMTLDEKTAAPTFRILNKG
                     AAKMGDRAGSLKAWVLHSTTLHGLYDNALTNAENLFKYENVNVIRDPFGRVFVVTDSP
                     ALMASDGTFNTLGLVENAVVVSGNNDFDSVLVPKTGGENLSAVYQAEWTYNLGILGYK
                     WDMTAGGKSPNDTALGTPTNWDKSVTSNKDTAGVLVKTK"
     gene            6170..6520
                     /locus_tag="PXE50_001315"
     CDS             6170..6520
                     /locus_tag="PXE50_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622232.1"
                     /translation="MKRILYFTTDFSAKNIAFAKAHGVLMRNLNAYHPSDTLENADAV
                     CGNVPQAYQHLPLFELPESNQKSGQDLKTLKTEEIKEKLTELGIAFEANAKKETLLTL
                     LTQAVGRDGTNDAK"
     gene            6510..6947
                     /locus_tag="PXE50_001316"
     CDS             6510..6947
                     /locus_tag="PXE50_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622233.1"
                     /translation="MLNSYMTVEQANAYHDIRMSREAWNALSDQEKQQRLVSASDFLD
                     FNYRFSGEKADLTQEREFPRKGFEAIGIPKAVQFAVCELALQDNLTANQEAQMSSVRV
                     GPVSVNYDNSSPQNSVNRFEYVRQLLSTWLDRSSFGTVKLERS"
     gene            6947..7318
                     /locus_tag="PXE50_001317"
     CDS             6947..7318
                     /locus_tag="PXE50_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622234.1"
                     /translation="MADFYGNLGKISHSLIKQFGQPCSVTINEQGRYNPATGERKKGS
                     STVHAGYCLFDNLAFDFRNQQSVSVQQGDVMIYLTADCKPVLNAVIEANGEKWSVINV
                     QPIRPAATTMIYQVQGRKADG"
     gene            7311..7724
                     /locus_tag="PXE50_001318"
     CDS             7311..7724
                     /locus_tag="PXE50_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HDL5622235.1"
                     /translation="MGSFHAQIARFVEQTQQKADRALRVIALQTLSGVQKKSPVDTGQ
                     LRRSWTVALNGFPSSYNGSQTVLNSAKFGDMIVIATNKPYAPMLEYGLYPNPPKKPTG
                     KTKNGYSIQAPNGMVRITVQEMQAFIRNNPQLGVS"
     gene            7724..8116
                     /locus_tag="PXE50_001319"
     CDS             7724..8116
                     /locus_tag="PXE50_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622236.1"
                     /translation="MRPIIRSVLEQHLAELNPFNTVWEGIIDSPKLPYQTVSMTTSTN
                     ETATIGNTPKAKQSGFLQVTLYYPLDQGTKAIEERADEIFRHFFGQVWIEENVQILVQ
                     QPPLVASLYRLDNSIALPVTIYFTAYEL"
     gene            8126..9148
                     /locus_tag="PXE50_001320"
     CDS             8126..9148
                     /locus_tag="PXE50_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622237.1"
                     /translation="MSILGNSQGTKRTVVFAKESSFGTKAAPTGAKIMPRVETSLNTN
                     FESYQSEEIRDDLQRSASVIGFEKVEGDIKGELAAGQWAAFFAAALRGSFTAQAKKPI
                     ITKTTDGTGEKNGKILIVPKTSHTSDSFTLEDVFKDINVSRQYLGCRVSKLSLDVQPN
                     GIASITVSFLGQRGEESTTAYFTNPTDLTQSGKLAGVKGSLQVNKRPVGLVTAFKLDI
                     DLGASSEPVLGAKYAPDVFIGTVAVSGSFTMYFQDKTMIDAVRNGTDLSLALRMDAEE
                     RTNTDYLTIILPGVKVTSNELDDGAKNIMQTLNFDAFPAVWDSASQIDNVLKVATTMI
                     VQDSLA"
     gene            9238..9639
                     /locus_tag="PXE50_001321"
     CDS             9238..9639
                     /locus_tag="PXE50_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622238.1"
                     /translation="MNLNALSKEKQLAEHRFELVHPVSGEPLGVFMSVVSAKSDKAQR
                     FAEKQLRQEQMRELENAKSRKPKFKGLGDMIAESRAMAIDRLTGWENVEWNEKPLEFS
                     DQNAELLLTECDWIVEQIFEHSNDLGKFLKS"
     gene            9654..9980
                     /locus_tag="PXE50_001322"
     CDS             9654..9980
                     /locus_tag="PXE50_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622239.1"
                     /translation="MYAEKTFKLDKKLKGSESTLREHLQAIEMQTGITPEELHNPEPS
                     PAVAYLLGWFFELAMSRQSGMSLNPISYTEIDAWSRLFARHLEQWEISVIKQLDMIYL
                     NVQQTE"
     gene            9982..10305
                     /locus_tag="PXE50_001323"
     CDS             9982..10305
                     /locus_tag="PXE50_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005714385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5622240.1"
                     /translation="MDTFNFQPNWGLNVQRKPEVMKIAFGDGYEQVAPKGLNHNLRTY
                     SAVFTGTEARIKQIEAFFERQGGYKAFLWTPYGGKEGKFRCEEWEVSISSGKWTLSAT
                     IREVL"
     gene            10392..11084
                     /locus_tag="PXE50_001324"
     CDS             10392..11084
                     /locus_tag="PXE50_001324"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622241.1"
                     /translation="MKKIFVSALLLTCSLSALGNSSYELIIDSMQDLEKHKPEILSIP
                     EADRNTFIRYMMRKELRIKLNQGRLADGLTVREAIQNQQAFEKDRNSKMQQEKQKKET
                     EKAEKEKAVTDFNQKFELSITGARKAKNALNQDILLVSLSLKNNSDKPIIAVQPDIQF
                     VLGEDKQTISSMRPKKFENGIPPNGSEIFEFGFDLDDMFALKAEKNIEKLRAVFQTAE
                     VLFADGTTEKLQ"
     gene            11148..11972
                     /locus_tag="PXE50_001325"
                     /pseudo
     CDS             11148..11972
                     /locus_tag="PXE50_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015691083.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tape measure protein"
     gene            14016..14174
                     /locus_tag="PXE50_001326"
                     /pseudo
     CDS             14016..14174
                     /locus_tag="PXE50_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251214.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
     gene            14182..14898
                     /locus_tag="PXE50_001327"
     CDS             14182..14898
                     /locus_tag="PXE50_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HDL5622242.1"
                     /translation="MPISISNQMKLDLAKLEQNAMLDLYEVDLRNLKDKSGNAGRVYR
                     FYSGLNELKTSIVWQGRTYDPYPIEASGFERNSSGPSNRPTLTLSNLFGLITSIANQF
                     DECIGAIVRRHQVYAQYLDAVNFAGGNAKADPNQEIISHFVIEQLTSLTRETATFTLA
                     LPIETDNAKIPSRIIMADTCTWIYRSAECGYTGKQYFDEKDKSTSDPKADKCSHCLNG
                     CELRGNQRNFGGFVSVNKLG"
     gene            14902..15633
                     /locus_tag="PXE50_001328"
     CDS             14902..15633
                     /locus_tag="PXE50_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDL5622243.1"
                     /translation="MELEQQIIDYALQHEPHEMCGFVVFDGNKNRFIPCENQAEDKAN
                     YFEISDLDYIKAEEKGELVAVVHSHPEPNGKPILSVLDRKMQVQTGLDWWLVHNRQIH
                     KFRNVPHLIGREFKHGTMDCYTLYRDAYMLAGYEMDEFERQDDWWHSGQNLYLDNIQG
                     QGFERVETPQIGDVILMQVGADVPNHAAIYIGEQMVIHHSPNRLSKRDLYDGYWLRHT
                     HSIWRHKLAEKLDFDGILNDIAVQD"
     gene            16267..16929
                     /locus_tag="PXE50_001329"
     CDS             16267..16929
                     /locus_tag="PXE50_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005826391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bro-N domain-containing protein"
                     /protein_id="HDL5622244.1"
                     /translation="MTTQTKLSTFNFETQQIRVIAVNGEPWFVAKDLCDTLGISNPSK
                     AILNLDDDEKMISSDSNLKLGSAGNGAQSLSLVSESGMYTLILRCREAVKKGSVPHRF
                     RKWVTAEVLPQIRKTGAYTKPVEQEPKFTHTLTSDELRDLAWLWFEASKMAETMNTLY
                     QPLMAIGSNLAPMVYSQGVEYGNHIQRMGKLIYRLTYGVDFSNNPTPFRHLQQGVALP
                     HR"
     gene            17012..>17479
                     /locus_tag="PXE50_001330"
     CDS             17012..>17479
                     /locus_tag="PXE50_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HDL5622245.1"
                     /translation="MVKVKFYGHLRKFGTDFKLEVKDTAEAIRALCTQIRGLREALRD
                     GVYKVRIGKQYLDPSALEKGLFYCLKKGQTIHFTPVIKGAKSGGVFQAVLGVALIGAA
                     FFLGPVGWGVLGASSAMMMGAMGASMLLGGVSQMLTKMPKAPTMGNETEKESST"
BASE COUNT         5527 a         3389 c         4045 g         4518 t
ORIGIN      
        1 ggggactact tagaatcctc tgatgctcaa atctttagag ataaatacca agaattagaa
       61 tttaagccta accctgattt taacggtcct tattacgggc tggactttgg ttttgccaat
      121 gacccaacag cctgtgtgaa atgttgggtg ttcgatgatg acttatatat cgagcgtgaa
      181 gcagggaaag taagactaga gctcgatgag accgctgctt atttagcaaa tgctttgcct
      241 gatttgagta attatactgt tagagcagat tctgctcgcc cagaatccat cagttattta
      301 aaacgacatg gattgcctta tattcaacct gttccaaagt ggaaaggctc agtcgaagat
      361 ggggttgagc atataaaatc ttatcgtaaa gtatatattc atccaagttg tacagaggta
      421 ttgaaagaat ttcgccttta tagttacaaa acggacagat taagtggtga tgtactgcct
      481 atcattattg acgctcataa ccactatatt gatgccattc gttatgcctt aaatcctctt
      541 attcaggcaa gaggcgaggc gaagcaatgt gcattaaagg tttattaaaa tgaggtaaca
      601 atgcctaact ccatctcagc cgattttgcg gcattaaaag caaaaacaaa aatcatcgat
      661 gatttactcg gtggcacaca aaaaatgcga caagcgggtc aaacctacct ctataaaatg
      721 aaaatggaag aggaagatgg atataaaaac cgattaaatc gttctacgct ttatccggca
      781 ttgagggaaa cgctttcgca gatgttgggg agagtgtttt ttaatccgat caacgtagag
      841 gatgtgcata aacaaatcga accattgttt gatgatattg atttagaggg taacaatctt
      901 gatgtattcg cttctcgttg gttttatgct gcattggctt atggcgtatc ttattgcttg
      961 gtggattttg tgagggtaga gaatgcccgc agtcttgcag aagaaaaagc tcaaaatgca
     1021 cgtccgtatt tggtgcatat taagccgcaa caagtgctgg gctttaaaac agccaaaatc
     1081 aacggtaaaa ctgcttttac ccaatttcgt tataaagaga cagttacaga agatgatggc
     1141 gagtttgctt ctaaacaggt gaactacatt tatgtttatg aaatcggacg tgtccgaaaa
     1201 tataagaacg atgagggtgg cttatcactg gttgctgata tgcaaatcaa agctcaaaat
     1261 acaccgcttg catttgtgcc tattgttcca tttatcacta aaccgattga tgtttgggga
     1321 atgggtgagc cgcctttaat ggagctggct tatttaaata ttaagcactg gcaaagtcag
     1381 tcagatcaag acaatatttt gaatattgct cgtgtaccgc tattagctat tttctctgat
     1441 actcaaataa aatcccttga aatcggctca agtgcaatat ctctgccgaa agacagtaca
     1501 atgcagttta ttgagcattc aggttcgtct attaatgccg gtttaaccag tctgaaagaa
     1561 ctagaagacc aaatgaaaac tgccggtgcg aaactgctaa ctaaaacagc attagcaatg
     1621 acggatagtc aggctaaaga tgaagcaggt aaagagatct cacagcttag acattatgct
     1681 aacaaatttg aagatgctct cgatttggct tttgagtaca ttgggcattg gctaggtatc
     1741 ggcgttgatg aagttgggac ttcgcaaatt tcaggcaata tcgacaatga tttagatcca
     1801 aatgcgtcaa tggcaaccat tattcagcta cgcaatgccg gtgtcatttc aaatcactct
     1861 acgtttgaag aagctaaaag acgaggttta ttgtcagata gtgcaaaatg ggaagacgaa
     1921 caagcaaggt tacaagcgga aggtttaagc gatgacttta caaatccatt caattcgaac
     1981 caaagtgaaa acgccgctag ctaaacggat cgctcacgca ttaacagatc gtaaaatatt
     2041 gcagttccgt tttgatgctc atttacgaaa tcaagtttgg caacgactca caaaaacgca
     2101 aaaggcatta ttaaaccgaa ttaatgcagc cgggatagat gccttaccga aaagagagtt
     2161 ggataaactg ctcaaagaac tcaaagcaga aattgcaaaa aattaccaag aaacgaccgc
     2221 ttacattcag cctgaattaa gcggtttttt tgcggttgaa aaacaggcac tgactgagct
     2281 ttacaatgat gaaatcggct atgatttttt caatcaagtg ccgtcatatc aacgtaaagc
     2341 tacgcaacaa gcgactatta ttgccggaat gccgcttgaa agttggtttg aaaagcaagg
     2401 atcagagctt tcgtttaaat ttgaaagcac cattcggcaa ggcttgttag agggtaggca
     2461 aacgcctgag attgccaaag ctacggctga attatttggt atatccagac ggcacgctga
     2521 tacacttgtc attactgctg tggcaaaagt ggcggacgat gctcacaagg cattgcgaga
     2581 tgaaaatctt gatttaatta agggtgagat gcacttatca acgctcgata cccgcaccag
     2641 tactgtttgt caagtgcgag acggtaagat gtgggacact gattacaagc ctatcggaca
     2701 cagtttgccg tatcaacgcc caccacttca ccctcgctgt cgttcgattc tgcaactggt
     2761 gatgaaagac tggaaagagt taggctttga tgatgtgaaa gaaatgccga aaagcactag
     2821 ggcgagtgca gacgggcaag tgtcggagaa gacaaactat gaagagtggc tcagtagcaa
     2881 aacaccggaa gagcaagata aagcgctagg caaaggcaag gcggatttgt ggcggcgggg
     2941 agtgataacg tttagcgata tgttagatca aagtgctaga ccattgacac taaaagagct
     3001 atattcatta aaaaatagtt cttcggtaga taaaatggat agtgtggaac ttgtccgtaa
     3061 aaaggctgtt gcagttgagc ctatgattac tcgtgatgta gtatcaatta ttacagcatc
     3121 tgggggcgag cctgccggct tagattttcg cttgaaatca ctatcatctt tgcagcgaaa
     3181 aattgatacg gaaataatgg ccggagtgtc aaaagagcaa gcgatagcaa gtattcgaga
     3241 tgttattcgc tacactgcaa tcttagatga acagcgtttt gttgagcaat accaaaaaat
     3301 gcaaaaagac ttggagaaac aaggttattc tacgatcatt gttaaaaaca cttggaaatc
     3361 aaataatgct tataagggca ttaatacgtt tgtgagcact tttattgaaa agaataatat
     3421 aatttttgaa ttgcaatatc atacaaaaca aagttttgag ttgaaaaacg gtaaattgca
     3481 cgagctctat gaaaaattca gagatctgaa tatacctctt gcaaaaaaat cagaaatttt
     3541 acttgaaatg cagaagttaa gtgctaatct aaaagagcca aagaacattg atttaatcaa
     3601 ggagaaaaaa taatgtatca gtattattta gctcaagttg gcaatgaaca gcaaaaactt
     3661 attcgtggta tgcctgacaa tctacttagt ttctcggttt atgagcctga acaagaagat
     3721 tgggataata agttcggccc attttgggca gacaagatct tgataagcgg atttgacgct
     3781 tacgaggaaa tttcagaaaa ggaagcaatc cgatttatca aggtacatta aatgtgtcaa
     3841 gctgaacaat tcgctcgcca actgcattat ggacaaacag ataaagctgg aaagccatac
     3901 attgagcatc ttgcttttgt tgcagaaaac attagcacaa aaaatgaaga gacagaagca
     3961 gtagcttggt tgcacgacag tgtagaagat actcagtgtt caattaatga tattcgtcat
     4021 atatttggcg atgttattgc tgatgcagtt gaggctatta ctaaaaagca aggcgaaagt
     4081 tatttttgct acttggatag agtaaaatca aatcctattg ctaaggtggt taagttagct
     4141 gatttgactc ataatctttg ccttgagcga ttgcccaaga tcactgaaaa ggatcttaaa
     4201 cgagcagaaa aatacaaatc agcattggaa tatctacaag cctagcctaa aacgctaggc
     4261 ttttttatcg caatttttta ccccaaactg accgtttgtg agccatcaca ggcggttttt
     4321 tattatcggg cggaagccca ccagcaatga gaggaagctc aaatgaaatt aaaattagac
     4381 gaaaacggac atgtagtagt tgaaaatggt atgcctgtgt atattcacga tgacggaaag
     4441 gaaattccgt tcgatgcact aaaggcgaca cagaaaatca cacaactgaa cgctgaggca
     4501 aagcaacatc gagaagctaa agagaaagcg gaagccgact taaaagcatt ctcagggatt
     4561 gacgatccga aagctgcact cgaggcatta aagacggttg ccaatttaga tgctaaaaag
     4621 ctgattgatg ccggtgatgc ggaaaaagtc aaagcggaaa tcatcaaagg ttacgatgag
     4681 aaattagctg tggcaaccgc tcaagccgaa aaactgcaac agcagttaca cgctgaatta
     4741 atcggtggtt cgtttgctcg gtctaaatac gctcaagaac acttgaatat tccgtctgat
     4801 gtcgtacagg cattcttcgg taagcatttt agtatttcgg atgacggcaa agtggtagct
     4861 aaatttgctg acgggggcga aatctttagt cgcacccgcc cgggcgaaaa agcagatttt
     4921 gaagaggcat tagaagcttt agtaagtgct tatccaaata aagacgctat tttaaaacca
     4981 agtggttcaa gtggggcagg agcaggtggc ggatcacgca gttcatctat gccgaaaaca
     5041 ttatcggact gcaaaacaga tgaagagcgt atcgcttatc ttcaagcaaa ttcgtaaggt
     5101 gcaagaggtt gcaccttttt tattttcggt gcaatcgcac cactttttag aggaaaatca
     5161 aaatggcatt tgacctacag gtttttaaca aacaaacgca attagccttg accgaaactg
     5221 tcgatcaggc tattgaaaaa ttcaatgcag catcaggcgg tgcaatcatt ttacagaaca
     5281 agccagctga aggtgatttt gatatccgtg ctagctttaa aggtattgcc ggtttagttc
     5341 gccgccgtaa tgtgtacggt acaggtacgg tagatgcaaa acgtttagag caattactgg
     5401 acgtagcagt taaagtggcg gcaggtacag caccgattga ataccagccg agtcaatata
     5461 aatggatttt attaaatcct gaattggcgg cgattgaaat cggcacacaa cttgccaaag
     5521 cccgtgttgc tgatatgctc aatacggcta ttgccggcac ggttgctgca attagtggca
     5581 atacagcaat gacacttgat gaaaagaccg ccgctccgac attccgcatt ttaaacaaag
     5641 gtgcagcgaa aatgggtgat cgtgccggtt cgcttaaagc gtgggtgttg cactccacaa
     5701 ccttacacgg cttatacgat aatgccttaa ccaatgcgga aaacttattc aagtacgaaa
     5761 acgtgaacgt aattcgtgac ccgtttgggc gtgtatttgt cgtcacagac agcccggctt
     5821 taatggcttc agacggtaca tttaacacct taggcttggt tgaaaatgcg gtggtagttt
     5881 ccggcaacaa tgactttgac agcgtgttag tgccgaaaac cggcggagaa aacctttcag
     5941 cagtttacca agctgaatgg acctataact taggaatcct aggttataaa tgggatatga
     6001 ccgctggtgg taaatcaccg aacgataccg ccctaggcac accgacgaac tgggataaat
     6061 cggttacctc caacaaagac accgccggtg tattggtaaa aacgaagtaa tttttaaccg
     6121 cttgtagata aggtttacaa gcggttgttt ttttatctgg agtttgcaaa tgaaacgaat
     6181 actttatttt acaacggatt tttcggcaaa aaacattgcc tttgccaaag ctcacggtgt
     6241 attaatgcgg aatctgaacg cttaccaccc atcagacacc ttagaaaatg cagatgcagt
     6301 gtgcggtaac gtacctcaag cttatcaaca tttaccgttg tttgaattgc ctgagtctaa
     6361 ccaaaaatca ggtcaagatt tgaaaacctt aaaaaccgaa gaaattaagg aaaaactgac
     6421 tgaattaggt attgcttttg aggcgaatgc caaaaaagaa acattactaa ccttactcac
     6481 tcaggcggtg ggacgtgacg gaacaaacga tgctaaatag ttatatgacg gttgagcaag
     6541 ccaacgccta tcacgacatc agaatgagcc gtgaggcgtg gaatgcgtta agcgatcaag
     6601 aaaaacagca acgattggtg tcagcgtctg attttctgga tttcaattat cgtttttcag
     6661 gcgaaaaagc agatcttact caagagcgtg aatttccacg caagggtttt gaagctatcg
     6721 gtattcctaa agccgtgcaa tttgcggtat gtgagttggc attgcaagat aacttgaccg
     6781 caaatcaaga agctcaaatg agtagcgtaa gagttggccc ggtttcagtt aattatgata
     6841 acagttcacc gcaaaacagc gtgaatcggt ttgagtatgt gaggcagttg ctttccactt
     6901 ggttagatcg atcttctttc ggcacggtta agttggagcg tagttgatgg cggattttta
     6961 cggcaattta gggaaaatct cccattcttt gattaagcaa ttcgggcagc cttgtagtgt
     7021 aacaattaac gaacaaggca gatacaaccc tgcaaccggt gagcggaaaa aaggtagctc
     7081 aacggttcac gcaggctatt gtctgtttga taatttggcg tttgatttcc gcaatcagca
     7141 atctgtcagc gttcaacaag gcgatgtgat gatttatctc actgccgatt gcaaaccggt
     7201 attaaatgct gtgattgaag caaacggcga aaaatggtcg gtcatcaacg tccagcctat
     7261 acgcccagca gctaccacga tgatttatca agtacaaggg agaaaagccg atgggtagtt
     7321 ttcacgctca aatcgcccgt tttgtggaac aaacgcaaca aaaagcggat agggcgttaa
     7381 gggtaattgc cctgcaaacc ttaagtgggg tgcagaagaa atcgcctgtc gataccggac
     7441 aacttcggcg tagctggacg gtggcattaa atggtttccc gagcagttat aacggcagtc
     7501 aaaccgtgct gaatagtgct aaattcggcg atatgattgt gattgctacc aataaacctt
     7561 atgcaccaat gctcgaatat gggctttacc cgaacccacc aaaaaaaccg accggcaaga
     7621 ccaaaaacgg ttattcaata caagcaccta atggaatggt gcgaattacc gtgcaggaaa
     7681 tgcaagcctt tatccgcaat aatccacaat taggagtaag ctgatgcgac cgattatccg
     7741 ctcggtatta gagcaacatc ttgccgaact caatccgttt aatacggttt gggagggcat
     7801 catcgacagc ccgaaactgc cgtatcaaac cgtatcaatg acgacttcaa ccaacgaaac
     7861 cgccacgatt ggtaatacgc cgaaagccaa acagagcggt tttttgcagg tcacgcttta
     7921 ctatccgcta gatcagggga caaaggcgat tgaggaacga gccgatgaga tcttccgcca
     7981 ctttttcggg caggtctgga ttgaggaaaa tgtgcaaatt ctggtgcaac agccaccgct
     8041 tgtagcctca ctttatcgac tggataacag cattgcctta cccgtcacca tctattttac
     8101 cgcttatgaa ctataggaga acccaatgtc tattctaggc aattcacaag gcacaaaacg
     8161 tacggtcgtt tttgccaaag agagttcttt cggcacgaaa gctgctccga caggcgcaaa
     8221 aattatgcct cgtgttgaaa cctcactcaa taccaatttt gaaagttatc aatcggaaga
     8281 gatcagagat gatttacaac gctccgcctc tgtgatcggc tttgaaaagg tcgaaggcga
     8341 tattaaaggc gaactagccg ccggacaatg ggcggcattt tttgcggctg cattacgtgg
     8401 ttcatttacc gctcaggcga aaaagccgat tattaccaaa accacagacg gcaccggcga
     8461 gaaaaacggt aaaattttga ttgtgccgaa aaccagccac acctccgaca gtttcacgct
     8521 ggaagatgtc ttcaaagaca tcaacgtcag ccgccagtat ttgggatgtc gtgtatcgaa
     8581 actcagcctt gatgtgcaac caaacggtat tgcctcgatt acagtctcat ttttagggca
     8641 acgaggcgaa gaaagtacaa cagcctattt taccaatccc accgatttaa cccaatccgg
     8701 caagctggca ggggtaaaag gctcattgca ggtcaataaa cgcccagtcg ggttagtgac
     8761 ggcctttaaa ctggacattg atttaggggc aagcagtgag ccggtattag gggcaaaata
     8821 cgcccctgat gtctttatcg gtacagtggc agtgagcgga tcgtttacga tgtacttcca
     8881 agacaagacg atgattgatg cggtgcgtaa cggcacagat ttatcccttg ctttgcggat
     8941 ggatgccgaa gagcgtacca ataccgacta tttaaccatt atcttaccgg gtgtcaaagt
     9001 gacctcaaac gagttggacg atggggcgaa aaacattatg cagacactca attttgacgc
     9061 attccctgcg gtatgggatt cagcaagcca aatcgacaac gtgctaaaag tcgccaccac
     9121 aatgattgtg caagacagcc tcgcttaatc gaaattttgc aaaaaaataa ccgtatctaa
     9181 ccgcttgccc tcaaacaagc ggtctttttt atccccaatt tacaaaagga aacccaaatg
     9241 aatttaaacg cattaagtaa agaaaaacag ttagccgaac accgttttga gctggttcac
     9301 cctgttagtg gcgaaccgct cggcgtgttt atgagcgtcg tgagtgctaa gagtgataag
     9361 gctcaacgct ttgccgaaaa acaattacgc caagaacaga tgagagagct ggaaaatgcc
     9421 aaatcccgca agccgaaatt caaaggctta ggcgatatga ttgccgaaag tcgtgcaatg
     9481 gcgattgacc gcttaaccgg ctgggagaat gtcgaatgga acgaaaaacc gttggagttt
     9541 tccgaccaga atgcggagct acttttaacc gaatgtgatt ggattgtgga gcaaatcttt
     9601 gagcattcga acgatctggg aaagttcttg aagagctaat tgatgattta caggtgtatg
     9661 cagagaaaac gtttaagttg gataaaaaac ttaaaggcag cgaaagtacc ttgcgagagc
     9721 atttgcaggc aatcgaaatg caaactggca ttacaccaga agaattgcat aaccctgaac
     9781 ccagtccagc ggtggcctat ctgctgggct ggttcttcga gttggcaatg agccgacaat
     9841 cgggtatgag cttaaaccca attagctaca ctgaaattga tgcgtggagc aggctttttg
     9901 ctcgtcatct cgaacaatgg gagatcagcg taattaagca gcttgatatg atttacttga
     9961 acgtacaaca aacggagtag tatggatact ttcaactttc agcccaattg ggggcttaac
    10021 gtacagagaa agccagaagt gatgaaaatc gcctttggtg acggttacga acaagtcgcc
    10081 cctaaagggt taaaccataa tctccgcact tattccgctg ttttcaccgg cacagaagca
    10141 cggattaaac agattgaggc attttttgaa cgacaaggcg gctataaggc ttttctttgg
    10201 acaccttacg gcgggaaaga ggggaaattc cgctgtgaag agtgggaggt aagcataagc
    10261 agcgggaaat ggacgctgtc ggcgacgata agagaagtgt tgtagttttt tctgattttg
    10321 tgaactggtt cacactctgt gggttggata taggttagaa tttaagtcta atttgcttaa
    10381 cggagtcttt tatgaaaaaa atttttgttt cagccttatt gctcacttgc tcgttatctg
    10441 cacttggaaa ttcctcgtat gagttgatta ttgactcaat gcaagatctt gaaaagcata
    10501 aacccgaaat tctatctata ccagaagcgg atagaaatac ttttattcgt tatatgatgc
    10561 gaaaagaact gcggataaag ttaaatcaag gcagattagc ggatggtcta actgtgagag
    10621 aagctattca aaatcaacag gcatttgaaa aagatagaaa tagcaaaatg cagcaggaga
    10681 agcaaaaaaa agaaacagag aaagcagaaa aagaaaaagc tgttacggat tttaaccaaa
    10741 aatttgagct atccattaca ggggcgagaa aggcaaaaaa tgcactaaat caagatattt
    10801 tgcttgtttc attaagtcta aaaaataact cagataagcc aattatcgct gtacaaccgg
    10861 atattcaatt tgtactgggt gaagataaac aaactatttc atccatgcgt ccaaaaaaat
    10921 ttgaaaacgg cattccgcct aatggctcag agatttttga gtttgggttt gatttagatg
    10981 atatgtttgc tttgaaagca gaaaaaaata tagagaaatt gagggcagtc ttccaaacag
    11041 cagaagttct ttttgctgat ggaacaactg aaaaacttca atagtaattg gtaaatcttc
    11101 attggccgct tgtagaaata caggcggttt ttttattgga gcaagctatg gcagatttag
    11161 caacactggc gattaaaatc gaaacagaag gcgcaagccg agcaagtgca gatctaagta
    11221 aggtcgagca atctgcaaag aacacagaga aagccgcaga taatctgacg cgcgcaatgg
    11281 gaaatttgaa gcggatttta gcgattgcag ggctggctgg tgggttatcc gcttacctag
    11341 atatggctga aagaatgcag tcgttaaacg cacagcttaa atttgttact aactctcaat
    11401 acgaattcaa tagcgcacaa aaagagcttt ttgcgattgc gcagaatacg cgcgctagtt
    11461 tggaaagcac cacgcaactt tatattaaat cttctcaggc actgaaagat tacggctacg
    11521 cgcaaaagga tattctcaca tttaccgaaa ccattaacaa agcaatggca gttggcgggg
    11581 ttaagccaca agagcaagct agtgctttac tccaattatc acaggcatta ggttcaggga
    11641 aactgcaagg agatgaattc cgttcaattt cagaagctgc accgattatt ttagatacgc
    11701 ttgccgagta tatgggtaaa agtcgcgatg aagtaagaaa actcgcatcc gagggtaagc
    11761 tcaccgcaga cttactgttc aatgcgttta acggttcaag cgctaaaatt accgaaaaat
    11821 ttaatcaaat gccgctaaca tttggcggtg caatgcagca gttgcagaat gccacattga
    11881 aatttatcgg tgacctagat agtgcaaatg gcttgagtgg aatgttagct caagccatta
    11941 gttttttagc acagaatttt gatgtgttag gcaaggcttt gatttatgca accggtgctt
    12001 atattgcgtt taatgcagtt gcctttgctc agaattttgc aaaagcaacc ggtggtgtcg
    12061 gtttattaag tagtgcattt ggttatttga ctacgatgat ccgaggtgca actgttgcaa
    12121 tgatggctaa tcctatcgag cttttaacaa ctgcaattat tggggctgct tttgtatttg
    12181 atgcttttat cagtgatata gaggtaggtg cagcaacctt tgatgcgact tggggagatg
    12241 ttgcgacagc tgtgtgggat gattttaaag atttaacttc agatgcggca gattggttag
    12301 tcactcaatg ggataaagca accgccagtg cagcgagttc gttcagttcc ttaggtgttg
    12361 atattggctc agtatgggag acggtgcaat ccattacgaa aacattgatc aatagtatta
    12421 ttggtctgtt tgttggagct tatcaagcca tcgtgcttgc ttggaataat tttcctgcca
    12481 caatggaaaa cttgggtgtg atggcggtaa atgctcttgt cgatttggtt caaaaaggca
    12541 tcaatagcat tattcagctt atcaaattac cgattgagct tttaaacaga gcctcatcta
    12601 cttttggtgg aggaaatctg attgatacat caggttggaa ggcaagctta gatgatttta
    12661 aactaaaggc aagccgcgag gcagaagttg ttggtcaatc aattagccaa gcatttgcgg
    12721 atagtatcac cacagattac ataggcaatg cagttaattc agtgagtgac tatattgatg
    12781 gagcggcagt tcgtgggcgc ttaaaacgtc aattagatga aaccgcctct gacgatcaag
    12841 gtacgcagtc accagctaaa aaaacattag ctggaaataa taactctgct agtgactgga
    12901 aaaactacct caatgaactt gaacgagcca atgccgatgg attagcccgt attgcacttg
    12961 agcaagatcg ctcaatgcgt gaaatgttgg aaaaggcgaa gaaagccggt gcaagtcacg
    13021 ctgaaattga aaaagccaaa atgctgatta cagaacgtta tgctaaagag cgaatggaaa
    13081 ttgccgagaa gtatgtgccg agtctgaagt ttgaggaaga actcaaagat cagattaagg
    13141 aaattgatga actgcaaaag ttaaacctga ttaccaccga gcaagcaggt cttgcgaaag
    13201 aggcgttagc aggcaaatat cagccggtag ttgaaatcca acagcaatac atcaatcaac
    13261 tgagagagat tgaagcatta aaacaagccg gtgtattaag caaacctcaa gcagaagtag
    13321 cggccgaaaa agccaaatgg gacgccggca cacaaaaagc caaaatcgca ggtaaaaacg
    13381 ccgttagccc ttatgaaaaa tggaaatcgg aatttgaccc aatgcaggca attcaaaatg
    13441 agcaagcctc aaagttggca gaagtgcaat cgatgtacga tcagcatttg atccaatatg
    13501 aggattttat caacgctaaa gcacaaattg atgctaaggc gactgctgat actcatcaac
    13561 tgtttatgaa cagtattagt gggtttggtt cggcgataga tacgatgtta ggcgtgatga
    13621 aaaacgcagg gcaagagcaa tcaggtattt accgcacgat gtttgcgatg tcgaaagcgt
    13681 ttgctattgc ggaatcaatt ctgaacttga atcgtgcaat tactcaagca atgagcgatc
    13741 aaacagctat tacaccggct caaaaatttg caaatatggc ggctattgct agtgccgggg
    13801 cgagcttgat ttctaatatc cagtcagtct cattaggcgg tatggctcac agcggtattg
    13861 acaatgtgcc gaaagaaggc acttggttgc tggataaagg tgagcgtgta gtggatagtc
    13921 gtactaacca agacttaaaa acctttttat ccaatgctaa tcgtggcggt gcaagtggtc
    13981 aaagatcggc gataaatgtc aaaattatta ataacgggca acccgtagag gcgaaagtca
    14041 gcagtgaaga gactgtagat ggcaatatcc aaatgacggt ggaactgctg aagaaaatgg
    14101 atcaaatcgc cgatcaacgc taccgtagaa atcagttaaa tgatttaaga acaggtggaa
    14161 cattatctaa ataggtgaag tatgccaatt agtatttcta accaaatgaa actagatctt
    14221 gccaaacttg agcaaaatgc aatgctggac ttgtacgagg ttgatttgcg caatctcaaa
    14281 gataaaagtg gtaatgctgg cagagtttac cgcttttatt ctgggctaaa tgaactcaaa
    14341 acaagtatcg tctggcaagg gcggacttac gatccgtatc ctattgaggc aagtggattt
    14401 gaacgaaaca gtagcggccc gagcaatcgc ccgactctca cgctatcaaa tctgtttggt
    14461 ttaattacca gtattgcgaa tcagtttgac gaatgtatcg gtgcgattgt ccgccggcat
    14521 caggtttatg ctcaatattt agatgccgtg aattttgccg ggggtaatgc gaaagctgat
    14581 ccaaatcagg aaataatcag tcattttgtg attgagcagc ttaccagcct cacccgagaa
    14641 acggcgacct ttacgctggc attaccgatt gaaaccgata atgccaagat ccccagcaga
    14701 attattatgg cggacacctg cacttggatt taccgctcgg cggaatgtgg ctacaccggc
    14761 aagcagtatt ttgatgaaaa agacaaatca acctcagacc caaaagcaga taaatgtagt
    14821 cattgcctta atggttgtga attaagaggc aatcaacgca attttggcgg gtttgtatcg
    14881 gtaaataaat tggggtaatg aatggaattg gaacaacaaa taatcgacta cgccctccaa
    14941 cacgaaccgc acgaaatgtg cggctttgtt gtttttgacg gcaataaaaa tcgatttatc
    15001 ccttgcgaaa accaagcgga agacaaagcc aattactttg aaatatccga tcttgattac
    15061 atcaaagcag aagaaaaagg cgaactggta gcggtggtac attcacatcc cgagccaaac
    15121 ggcaagccta tattatctgt gcttgatcgc aaaatgcagg tacagaccgg tttagattgg
    15181 tggctagtgc ataatcggca aatccataaa ttcaggaatg tgccgcattt aatcgggcgt
    15241 gagtttaaac acggtacaat ggattgttat acgctctatc gtgatgccta tatgcttgcc
    15301 ggttatgaga tggacgagtt cgagcggcaa gatgactggt ggcatagcgg gcaaaatctc
    15361 tatttggata atattcaagg gcaaggtttt gagcgagtag aaaccccaca aatcggcgat
    15421 gtgattttaa tgcaggttgg agctgatgta cctaaccacg ctgccattta cattggcgaa
    15481 cagatggtaa tccatcatag cccgaaccga ttatctaagc gtgatttata cgacggctat
    15541 tggttacgtc atacccacag catttggcgg cataaactgg cggagaagtt agattttgat
    15601 ggcatattga atgatattgc tgttcaggat tagcaaaaaa tctttaaagc agtttaaaag
    15661 aaatttagcc attaagttgt gaaaatacat ttgacaaagc aaaggtgtgg aagtccttcc
    15721 tcattacaca gacaatgagc attgttatga tttcacaacg caatcggaaa aaacaaaccc
    15781 cgaagcgttt gcagcacttc ggggtttttc atatccaaat acctaataaa aaggaatgta
    15841 tatatacaat ggaaattatt gcatttattg tcacttcaat caaggagatt atcacaatgt
    15901 ttgaagaatt atcaacgtgg cgatttatcg ctattttaat cacgatcatc atctgttttg
    15961 ctgtgtggaa atcgcctgaa atcgtaaaag tactttacaa caagaaaagt tcagagtagt
    16021 atttacccca taggtgtcga aacctacata aaaggcggta atccgcaacc gaaaccccta
    16081 tgcggttttt ttgtacccga aatttggggc agaaaaggtc tattaaattt ttgtctatga
    16141 tcgagtgggt ggcgaataca acacccgaaa gggaaataag cccagccgac cttttacggc
    16201 tttcgaacca cttgatcgcc ctaatctacg gattaggaaa tgtcgaaaat ttaaaaggat
    16261 ctcactatga ctactcaaac aaaactctca acattcaact ttgaaaccca acaaatccgt
    16321 gttatcgcag taaatggcga accttggttc gttgcaaaag atctctgtga tacattggga
    16381 atttcaaatc caagcaaagc aattcttaac ttagatgacg atgaaaaaat gatttcttcc
    16441 gactctaact taaagttagg gtcggcagga aatggtgctc aaagtctaag tttagtttcc
    16501 gaaagcggaa tgtacaccct aatcctccgc tgtcgtgaag cggtgaaaaa aggttcagtg
    16561 ccacaccgtt tcagaaaatg ggtaaccgcc gaagtgttac cgcagatccg aaaaacaggt
    16621 gcttatacca aacctgttga gcaagagccg aaatttaccc atactctaac aagcgatgaa
    16681 ctacgggatt tagcgtggct ctggttcgag gcaagcaaaa tggcggaaac aatgaacacg
    16741 ctttatcaac cgctgatggc tattggctct aatcttgccc cgatggtgta tagccaaggt
    16801 gtggaatacg gcaaccatat tcagcgaatg ggcaaactca tctaccgcct cacctatggc
    16861 gtagatttta gcaataatcc gacaccgttc cgccatttac agcaaggcgt tgcactaccg
    16921 caccggtaat tcgcaaactt ttacaaaaaa atgaccgctt gcaggaaact gcaagtggct
    16981 tttggcatac attaaattta ttggagcaaa tatggtgaaa gtcaaatttt acggacacct
    17041 gagaaaattc ggtacagact ttaagcttga ggtaaaagac accgctgagg caattcgtgc
    17101 cttatgtaca cagattagag gattgcgtga ggcattgcga gacggtgttt ataaagtccg
    17161 tatcggtaag caatatttag acccatcagc ccttgaaaaa gggctttttt attgcttgaa
    17221 gaaagggcaa accattcatt ttacccctgt tatcaaaggg gcgaaaagcg ggggtgtttt
    17281 ccaagctgtg ttaggtgtag ccttaattgg agccgcattt tttctcgggc cggtcggttg
    17341 gggagttcta ggggcttctt ccgcaatgat gatgggagca atgggggcat caatgttact
    17401 aggaggagtt tcccaaatgc tcaccaaaat gccaaaagcc cccacaatgg gtaatgaaac
    17461 agaaaaagaa agctcaacg
//
LOCUS       DANLZQ010000045        17341 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.045, whole genome shotgun sequence.
ACCESSION   DANLZQ010000045 DANLZQ010000000
VERSION     DANLZQ010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 17341)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17341)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17341
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.045"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(30..632)
                     /locus_tag="PXE50_001331"
     CDS             complement(30..632)
                     /locus_tag="PXE50_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDL5622246.1"
                     /translation="METLIEFFSSYGYWAVFLVLLACGFGVPIPEDITLVSGGVISGL
                     GYTNVHWMLVVSMLGVLVGDSTMYWLGRIYGEKILKFPLIRNVATPERFATVQERFEK
                     QGWKLLFMARFLPGLRAVVYLVSGITRKVSFVKFLLVDFCAAIISVPIWVYLGDYGAS
                     NLDWLKEQVANGQHLIFAILGIVILFLGWKWYKNKKQYKK"
     gene            complement(634..1653)
                     /gene="purR"
                     /locus_tag="PXE50_001332"
     CDS             complement(634..1653)
                     /gene="purR"
                     /locus_tag="PXE50_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor PurR"
                     /protein_id="HDL5622247.1"
                     /translation="MATIKDVAKYAGVSTTTVSHVINKTRFVAEDTTKAVWEAIKALN
                     YSPSAVARSLKINTTKSIGMIITTSESPFFAEIVLAVEEFCYSKGYSLFLCNTQNKLE
                     KIQNHLDMLIKKRVDGILVMCSEYTANSFDIFENSNIPMVIMDWGRSDERSDIILDHG
                     VEGGYIATQHLIENGHQDIAVITGNRDKEIARTRFEGFKKALSEAGLSIREEWIQEGD
                     FEPEGGYECMNNLLKSSEKLPTAVFCFNDSMALGAISAITEKGLNVPQDISVIGYDNV
                     HSSRFYAPPLTTIHQSKSRLGSAALELLLERIEDNENAKEPKVLEFFPELVKRKSVRN
                     LNIKE"
     gene            complement(1789..2517)
                     /gene="cmoA"
                     /locus_tag="PXE50_001333"
     CDS             complement(1789..2517)
                     /gene="cmoA"
                     /locus_tag="PXE50_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy-S-adenosyl-L-methionine synthase CmoA"
                     /protein_id="HDL5622248.1"
                     /translation="MQRDTLFSAPIEKLGDFTFDESVAEVFPDMIQRSVPGYSNIITA
                     IGMLAERFVTDNSNVYDLGCSRGAGILSIRRNVNAKNVQIIGVDNSQPMVERCKTHLS
                     AYHSEIPVTILLDDIRHIEIKNASMVVLNFTLQFLPREDRLALLQKIYQGLNSNGILV
                     LSEKFTFESEEMNELLIDLHHTFKRANGYSELEVSQKRNALENVMRTDSIETHKKRLQ
                     EAGFTQVELWFQCFNFGSMIAIKA"
     gene            complement(2527..3309)
                     /locus_tag="PXE50_001334"
     CDS             complement(2527..3309)
                     /locus_tag="PXE50_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HDL5622249.1"
                     /translation="MTEKSQLNFNYQPSNNHANAQTMIFLHGLFGDLNNLGAIAKPFA
                     ERYSILMVDLRNHGRSFHSDEMNYALIAQDLAQLLTELNIQNAIVVGHSMGGKSAMAL
                     AAFAPELVEKLVVIDIAPVTYTQNRHQQVMAALFAVKEAKPQNRQQAKAIMAEYIRDE
                     GVQQFMLKSFDAQSEQSFRFNLQALKDNYQNVMGWQQVFVDKPTLFIKGALSDYIQAE
                     HTQTILAQFPQAKSFIVANADHWVHAEKTGTVVRAINKFLEK"
     gene            3428..3994
                     /gene="seqA"
                     /locus_tag="PXE50_001335"
     CDS             3428..3994
                     /gene="seqA"
                     /locus_tag="PXE50_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation negative regulator SeqA"
                     /protein_id="HDL5622250.1"
                     /translation="MKRIEIDDELYQYIASRTQSIGETASDILRRLLRLPQSPQPFVL
                     VQEHMINELKELVKTPSRATKKNESNAEKTVEKLENILNSEHFMNENKNVVRFTMLLA
                     ALYRANPEAFAKATEKVRGNERIYFSQSEAEILATGSGVKAKQIPDSPFWVITNNNTA
                     RKGLILKGVMESMKVPSQLIERIQALFI"
     gene            4004..5422
                     /gene="menE"
                     /locus_tag="PXE50_001336"
     CDS             4004..5422
                     /gene="menE"
                     /locus_tag="PXE50_001336"
                     /EC_number="6.2.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate--CoA ligase"
                     /protein_id="HDL5622251.1"
                     /translation="MLINSTRFPTQFWAAHSAQNVAIIWEKGTSDYLNHLPSNITWYS
                     LNQLIAQAIFVLQQQGATPHSLIAYCGSHRLIGLLTYCASLALGAKILMLNPAQTASQ
                     RQAVLDDNGVELIINDADFAKFSAKTTACNAFPTIDFEKPATLTLTSGSSGKPKAVVH
                     SIAAHLYSAEGVCELMAFEQPNSWLLSLPLFHVSGQGIIWRWLFKGATLYVHEDKSDF
                     FLSAQKVSHLSLVPTQLQRYLNQLDSMVSQKCLLGGSMLPAELIAQAQQSGMTTFSGY
                     GMTEMASTICAVENDLNSVGFPLKHRELKLENGEIWVKGKSLGLGYWQKNGQIRPLVN
                     TQGWFATKDRGEWNHKKQLVIKGRLDNMFISGGENIQPEEIEQLIFRSQLVEQIIVLP
                     IEDKQFGHRPVAFLQFKQSDSKNELHKLKIWLSDKLERFKQPVAYYLLDIEKYQKQGL
                     IKLSRTQLQQDLKLKVLKEIYV"
     gene            5415..8792
                     /gene="mscK"
                     /locus_tag="PXE50_001337"
     CDS             5415..8792
                     /gene="mscK"
                     /locus_tag="PXE50_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive channel MscK"
                     /protein_id="HDL5622252.1"
                     /translation="MFRPILKTFVLSLGLMLNSYALAELPTQQVVQTQLDSAKKLDQA
                     DADNKALVQTLEDTLAFLAQIDKQKADNQALNKSIQDSQKALKTSQHNLEKLKEVTIA
                     SVDNLTQKATTDLQKELTSTQSQLETVQHDLSIINNNLVAQNTAPDKAQTALTEMVKR
                     KQEISSQLSATNIKNELQTKLEVELELIELKNTYNQILLGGSEDLSALYSAQLDEKKQ
                     EQQNLQAEIANLQTAINNKIVEESQNKLDQAQAVQNQQNNATTNPVILRELDINTKVT
                     QELLKQTKDMTQLSQDNLRIKSVLDNLQQTQRNIEEQISSLQGTLVLSRIINKQKQSL
                     PQDEMISGLSKQIADLRVRVFDITEFKDSFADINAYISRIEQDEKTTFTSKEKEQLSK
                     ILQERSDTLTEMIKSLNNQLNLLINIELNQQQVQTISDALQQKLQQQSFWVKSNNPID
                     LEWFSKFVDITHYQFIDIGKKLNFSNWRDNLLPASILVGILLLLAIFINRQKDKIKQK
                     LHQINNRLKIVATDSQWNTPLAIFWTLVLCLPSTLMFLAGFVAITYISFENPQEVWTW
                     GLKMAIYWLYFAFLVAMLRPHGIGHIHFNMPQKSNEIFRNILKRSVWIIALLLNTSIF
                     TNLEMGISYDMLGQTMTIFVLILMIWMIVPAFRQAISTYENVTTEEKKESKSILLTIV
                     KLVLLLAPIILIILIALGYYYTALVIIEHLVDSYFAIITWIIIRNILYRAFSISSRRL
                     AYRRLQEKREAAEAKTRAKAEQNDENPDGVELPFELKEDSIAVSEVKNQMLKLTDFVL
                     WIGLFVLLYWVWSDLITVALYLDGVTLWQQSVTTEAGIVMESITLLNLLTAILIIVVM
                     VVLIRNLSGLLEALIFSHFKLSQGTPYTITTLLTYLIIALGAIFAFGTLGMSWSKLQW
                     LLTALSVGLGFGMQEIFANFVSGIIILFERPMRIGDTITIGTYSGTVSKIRIRATTLV
                     DFDGKEVIVPNKAFVTERLVNWALSSTATRIIVQVGVAYGSDLELVKRLLLQVAEENP
                     KVLKDPQPRAYFLTFGASTLDHELRAYVNDLSDRNPTIDALNTRIHQLFNEHNIDIAF
                     NQLDVYIKNNDTQDEIKVDSKRFEFERPNNITAKEKE"
     gene            8795..9877
                     /gene="aroC"
                     /locus_tag="PXE50_001338"
     CDS             8795..9877
                     /gene="aroC"
                     /locus_tag="PXE50_001338"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012072711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HDL5622253.1"
                     /translation="MAGNSIGQLFKVTTFGESHGIALGCIVDGVPPNMALSEADLQPD
                     LDRRKPGTSRYTTPRREDDEVQILSGVFEGKTTGTSIGLIIKNGDQRSQDYGDIAEKF
                     RPGHADYTYQQKYGIRDYRGGGRSSARETAMRVAAGAIAKKYLREQFGIEVRGYLSQI
                     GNIKIDPKTVENIEQIDWHAVNSNPFFCPDPVAIEGFDALIRELKKEGDSVGAKLTVI
                     AERVPVGLGEPVFDRLDADLAHALMSINAVKAVEIGDGFAVVEQRGSQHRDEMTPQGF
                     LSNHAGGILGGISSGQPIIAHIALKPTSSITIPGRSVNKNNEAVEVITKGRHDPCVGI
                     RAVPIAEAMMAIVLLDHLLRFKAQCR"
     gene            9896..10723
                     /gene="mepA"
                     /locus_tag="PXE50_001339"
     CDS             9896..10723
                     /gene="mepA"
                     /locus_tag="PXE50_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HDL5622254.1"
                     /translation="MKLLKTLLVSSLAFTATALNATQWEKIKTPVQGKAQSIGGYSNG
                     CIIGAQPLALKGEGYQVIRSARNRYYGHPQLLDYLTHLGKKTKAAGVPTILIGDMGMP
                     AGGRFASGHASHQTGLDADIWFKFGPMDDETARNPAGLATIMVNRSTERVDDSLWNQH
                     HTNLVKLAATDPRVDRIFVNPAIKVKLCQTAGNDRAWLRKIRPWYGHDSHFHVRLTCP
                     ADAASCENQALVPAGDGCGEELYSWFEPKEASGTPKAKVLPTAPVQCQMILSEQGLN"
     gene            10796..12715
                     /locus_tag="PXE50_001340"
     CDS             10796..12715
                     /locus_tag="PXE50_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HDL5622255.1"
                     /translation="MRLFVAEKPSLARAIADVLPKPHTKGDGFIQCGEHDTVTWCIGH
                     LLEQAEPDVYDERFKMWRMEHLPIVPEQWKLIPKKETLKQFKVVEKLIKKADVLVNAG
                     DPDREGQLLVDEVFGYLNLSAERKSQIQRCLVSDLNPNAVSRAIEKLQKNSDFIPLAT
                     SALARARADWLYGINMTRAYTLQGRWAGYKGVLSVGRVQTPVLGLIVRRDLEIEHFVP
                     KDYFEVLAQIVVPETQERFKAQWQPSKACEDYQDEDGRVLSRPLAENVVKRITDQPAT
                     VTEYQNKIEKETAPLPYSLSVLQMEAAGRYGLSAQAVLDICQKLYETHKLITYPRSDN
                     RYLPTEHFNDRFKVMAAIAHHLPEYQQKPEVIDATIRNRCWNDKEVEAHHAIIPTARQ
                     GTVHLTENEKRVYQLIARQYLMQFCPDAEYRKSKIGLEIAGGSFVAQARNLVIAGWRA
                     LLGKEDSLDDAEPLLPIVKKGQILHCEKGEIVSKKTQPPRHFTDRSLLSAMTGIARFV
                     QDKELKKILRETDGLGTEATRAGIIELLFKRGFLIRKGKNIHSTEAGRILIQALPDSA
                     TQPDMTAHWEMQLNQISKKETSYQQFMFDLNQQLPHLLQSPNRQVLQNLAKITPLASG
                     NKPRYFKKRTQTAEN"
     gene            12821..13147
                     /gene="secG"
                     /locus_tag="PXE50_001341"
     CDS             12821..13147
                     /gene="secG"
                     /locus_tag="PXE50_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HDL5622256.1"
                     /translation="MLINVLTIVYLVVAVLLIAFVLMQQGKGADAGASFGAGASATVF
                     GSAGSANFLSRTTALLATIFFAISLVIGNLSSHNVAPKSQFEDLSQVEQKQVEPVKIE
                     NSDIPQ"
     gene            13172..13257
                     /locus_tag="PXE50_001342"
     tRNA            13172..13257
                     /locus_tag="PXE50_001342"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:13206..13208,aa:Leu,seq:gag)
     gene            13460..14701
                     /locus_tag="PXE50_001343"
     CDS             13460..14701
                     /locus_tag="PXE50_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL5622257.1"
                     /translation="MARTTKALNKTQIENAKSKDKEYILSDGDGLNLRVKPLPKGSKI
                     WIFNYTNPQTKNRTNLTIGRYPLITLAEARTICDGYRSLIEKGIDPQEEKKRLQQEAE
                     NRVNDTFRNVAESYFNGIYKEKAKNPITREKNWIRLENHIFPYIGDKHVEEIKVKALV
                     DIYSKVADKSNTLKKLHQLVSAVMDHAITQGIIESHNCRLAVKNFYIKPSTPNPTIEL
                     EELPQLFTDLHNAKLSKQTYALVCWSFLTALRPNEAVNAEWKEIDFEKKLWNIPKEKM
                     KGKADKKRPHSVPLSSQALKILEMMKMHSNSSPFVFPGRSSNSKPMSNATVNSTLKRN
                     GYKDRLTAHGIRAFVKTFLSSRKVDRHVSESILSHLLEGGDDLENTYNRYDFLEERVP
                     VMQLLGDYCEQCGMNLELVRG"
     gene            complement(14860..16728)
                     /locus_tag="PXE50_001344"
     CDS             complement(14860..16728)
                     /locus_tag="PXE50_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HDL5622258.1"
                     /translation="MFKKLLELRQQKAAIEAEMRSILTKADEEKRSTTEAEGAKFDEL
                     RSQAENLVKEIARYEAITDEQRNQPGQQVETANVKVSDDELRHWIKTGELRSLATNTN
                     GGADGGYSVIPELDKQVMKRLTDDSVMRQIANVVKLTQGKEYKKLVSAGGAAVNHIGE
                     GEARTETATPKMNEVTIAVHNIYAYPKTTQEILDFGGVDILGWLTEEISESFVETEET
                     DLTNGTGTKQAKGFLAYPRTTANDKTRPFGTLQKMEVQPATVIGWNSKGQPETLTPYP
                     PYSVNVQRTVNRQNWLTAYIPHSYDENVAETPHFDQWLNFVSDGKQDKAKNILAALYA
                     ILTNRYNWQVFFQVTGKGGSGKSVFAGIATLLAGEKNTASARLENFDDERKIAGLEDK
                     KLIICSEQTKYAGDGGGLKAITGGDMVRVDPKNKHPFNARIAAMIMIVNNDPCKWTER
                     NGGIDRRIVNFRFNKRPPENERDPYFMDKITLEIGGIIRKVLDTFPDPLEAKRALEEQ
                     KESLEALEIKKQSDPLTDFFEYLYTTENTDGLYIGTGNTLGHDKIRTHLYPAYLAFVK
                     AKNVLELGLNTFVVGIEQAVKQHGNKHDFTKRKTNKGQRTNVHFKNFDDFQSDILN"
     gene            complement(16739..17134)
                     /locus_tag="PXE50_001345"
     CDS             complement(16739..17134)
                     /locus_tag="PXE50_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5622259.1"
                     /translation="MISNEAIRQEVIDLLQGNIQGIQHFHNGRAVFTDVENELPAIAV
                     FIDEAEYSQLTLCDGECNAYLKIGIYLPMFSTENDLDLVAQKISDVMNQATFHSMDEC
                     VLAKYSYDYDANESAWKTATLHYNINYLN"
BASE COUNT         5372 a         3601 c         3371 g         4997 t
ORIGIN      
        1 tttttaagat gaaatgctcg tcttttgttt cactttttat actgcttttt atttttatac
       61 catttccagc ctaaaaatag aataacaatg cctaaaatgg caaaaatgag gtgctgccca
      121 ttagctactt gttcttttag ccaatccaaa ttagatgccc catagtcgcc taaataaacc
      181 caaattggca cagagataat agcggcacag aaatcaacta ataaaaattt tacgaagctg
      241 acttttctgg taatacctga aactaagtaa accaccgcgc gcaagccagg taaaaaacga
      301 gccataaaaa gtagtttcca tccttgtttt tcaaaacgtt cttgcacggt tgcaaaacgt
      361 tcaggtgtcg caacattcct gattaatgga aatttgagaa ttttttcgcc atagattcta
      421 cctagccagt acattgtgct atcgccaact aatactccta acatactaac aaccagcatc
      481 caatgcacat tggtgtagcc taatcctgaa ataacaccac cggatactaa cgtaatatct
      541 tcaggaatcg gcacaccgaa accacaggca agtagcacaa gaaaaacagc ccaataacca
      601 tagctactaa aaaattcaat caatgtttcc atattactcc ttaatgttta aattccgaac
      661 cgatttacgt ttgaccaatt caggaaagaa ctctaatact ttaggctctt ttgcgttttc
      721 gttatcttca atacgttcta ataataattc taatgctgcc gagcctaagc gagattttga
      781 ctgatggatt gtcgtaagag gcggtgcata aaagcgtgag ctatgcacgt tatcataccc
      841 gatcactgaa atatcttgcg gcacattcag ccctttttcg gtaatagctg aaattgcccc
      901 tagtgccatt gagtcattaa aacaaaaaac cgcggttggt aatttttcac tgctcttaag
      961 caaattattc atacactcat accccccctc aggttcaaaa tcgccttctt gaatccattc
     1021 ttcacgaata gacaaacccg cctcagatag cgctttttta aaaccttcaa aacgggttct
     1081 tgcaatttct ttatctctat tgccggtaat tacagcaata tcttgatgcc cgttttcaat
     1141 taaatgctga gtcgcaatat agccaccttc aacaccgtga tctaaaataa tatcactgcg
     1201 ttcatcactt cgtccccaat ccataatcac cattgggata ttgctgtttt caaagatatc
     1261 aaatgaatta gctgtatatt cggagcacat caccaaaatg ccatcaaccc gttttttgat
     1321 gagcatatct aaatgatttt gaattttctc aagtttgttt tgagtattgc acaaaaatag
     1381 tgaataccct ttgctatagc aaaattcctc taccgctaac acaatttcag cgaaaaacgg
     1441 tgattcgctg gttgtaatga tcataccgat agatttagtc gtattaattt tcaaactccg
     1501 cgctacagca ctaggagaat agttcagcgc tttaatagcc tcccaaactg cttttgtagt
     1561 gtcctctgct acaaagcggg ttttgtttat aacgtgagaa accgttgtag tcgatacacc
     1621 agcatatttt gcgacatctt ttatcgttgc catacctttt tcctcctaaa taagtagtgg
     1681 tgcattataa ctgattctaa ctgactttta ttataaagaa atagatagaa tgcaagcggt
     1741 tgctttttat caagaatttg caaaaaattt tacaaatatc accgcttgtt aggctttaat
     1801 tgcaatcatt gagccaaaat taaagcattg aaaccaaagt tcaacttgtg taaaaccagc
     1861 ttcttgcaga cgttttttat gggtttcaat actatctgtt cgcatcacat tttccaaagc
     1921 attacgcttt tggctgactt ccaattcact gtagccattt gctcgtttga atgtgtgatg
     1981 aaggtcgatc aatagctcgt tcatttcctc actctcaaag gtaaattttt ccgataacac
     2041 taaaatgcca ttggaattta atccttgata aatcttctgt aataatgcta ggcgatcttc
     2101 tcttggtaaa aattgcaagg tgaaattaag taccaccatt gaagcatttt taatttcaat
     2161 gtggcgaata tcatcaagta aaatcgtcac cgggatctca gagtgataag cacttaaatg
     2221 ggttttacaa cgctcaacca tcggctgaga attatctacc ccgataatct gcacattctt
     2281 cgcattcaca ttacggcgaa tagataaaat ccctgcgcct cgtgaacaac ctaaatcata
     2341 aacatttgaa ttatctgtga caaaacgctc cgccaacatt ccaatagcag taataatatt
     2401 ggaatagccc ggcacggagc gttggatcat atccggaaac acttcagcaa ccgattcatc
     2461 aaaagtaaaa tcgcccaatt tctcaatcgg agcggaaaat aatgtatctc tttgcatttt
     2521 tctcccttat ttttctaaaa atttattgat tgctctcaca acagttcctg ttttttctgc
     2581 gtgaacccaa tgatcagcgt ttgccacaat gaaagatttg gcctgcggaa attgtgccaa
     2641 aatcgtttgt gtatgctctg cttgaatata atccgataat gcacctttaa taaacaaggt
     2701 cggtttatcc acaaatacct gctgccaccc catcacattc tgataattat cttttagcgc
     2761 ctgtaaatta aaacggaaag attgctcgct ttgggcatca aaagatttca acataaactg
     2821 ttgcacgcct tcatctcgaa tatattcagc cattatcgct ttagcttgct gacgattctg
     2881 gggtttagct tctttcaccg caaataaggc tgccataacc tgctgatgcc gattttgggt
     2941 ataagtgacc ggggcaatat caatcactac caatttctcc accagttcag gagcaaatgc
     3001 agccaatgcc atcgcacttt ttccgcccat tgaatgccca accacaatag cattttggat
     3061 atttaattct gtgagtaatt gtgctaaatc ttgtgcaatc aaagcataat tcatttcgtc
     3121 tgaatgaaaa gatcgcccgt gatttctgag atcaaccatt aaaatggagt aacgttctgc
     3181 gaatggtttt gctattgcgc ctaggttatt taaatctcca aacaatccat gtaagaagat
     3241 catcgtctga gcattagcat gattattcga aggttggtaa ttaaagttta actgcgattt
     3301 ttctgtcata taaatgtcat tgttcatata aattttcagc gatgttcctc tataaaaaac
     3361 aatagaaatg cgtataatag caagcactat taacgcattt aatacccgca gatatttgag
     3421 gatcccgatg aaacgaatcg aaattgatga tgaattatat cagtatattg caagccgtac
     3481 acaatctatt ggtgaaactg cgtcagatat attacgccgt ctattacgcc tgccacaatc
     3541 gcctcagcct tttgttttag tacaagaaca catgatcaac gagcttaaag agcttgtcaa
     3601 aacgccttct cgtgctacga aaaaaaatga atccaatgca gaaaaaaccg ttgaaaaatt
     3661 ggaaaacatt ttaaattccg agcattttat gaacgaaaat aaaaatgtag tgcgttttac
     3721 tatgctatta gccgcattat atcgagcaaa tccggaggct tttgctaaag caaccgaaaa
     3781 agtgcgtggt aatgaacgta tctacttttc gcaaagtgaa gccgaaattt tagctactgg
     3841 gagtggagta aaagccaagc agatcccaga ttcaccgttt tgggtaatta ccaataataa
     3901 taccgcacgc aagggactta ttctcaaagg cgtaatggaa tccatgaaag taccaagcca
     3961 gttaatcgaa cgcattcaag cgctttttat ctaattaatt gaaatgctca tcaattctac
     4021 tcgctttcct acccaatttt gggctgctca ttcagcccaa aatgtggcga ttatttggga
     4081 aaaaggaaca tcagactatc ttaaccacct tccatcaaac atcacttggt atagtttgaa
     4141 tcagttgatt gcgcaagcta ttttcgtgtt gcaacaacaa ggtgctactc cgcacagttt
     4201 gattgcctat tgtggttctc atcggctcat tggcttgctc acttattgtg ctagccttgc
     4261 tttgggggct aagattctaa tgcttaaccc tgctcaaaca gcaagtcaac gacaagcagt
     4321 cttagatgac aatggtgttg agctcattat taatgatgcc gactttgcaa aattttcagc
     4381 aaaaacgacc gcttgtaatg ccttccctac gattgatttt gaaaaaccag ctaccctaac
     4441 cctaacctca ggctcaagcg gtaaacctaa agcagtggtg cattctatag cggcccatct
     4501 ctatagtgcc gaaggagtat gtgaattaat ggcatttgag cagccaaact cttggctact
     4561 gagcttgcct ctgtttcacg tttccggaca aggcattatt tggcgttggt tatttaaagg
     4621 tgcaacactg tatgttcacg aagacaaaag tgattttttt ctttcagcac aaaaagtgag
     4681 ccatctctct ttagtcccca cccaattaca acgctattta aaccaattag attctatggt
     4741 cagccaaaaa tgtttactgg gtggatctat gcttccagcc gaattgattg ctcaagcaca
     4801 acaatctggg atgactacct tttcaggcta cggaatgact gagatggcat caaccatttg
     4861 tgcagtagaa aatgatttaa acagtgttgg ttttccgtta aaacatcggg aactaaaatt
     4921 agaaaatggt gaaatttggg taaaaggcaa atcactcggc ttaggctatt ggcaaaaaaa
     4981 tgggcaaatt cgaccgcttg taaacacaca aggctggttt gccactaaag atcgtggcga
     5041 atggaatcac aaaaaacagc ttgtaataaa aggacgattg gataatatgt ttatttcagg
     5101 aggggaaaat atccaacctg aggaaattga acaactgatt tttcgttctc agcttgtcga
     5161 acagattatc gtgttgccga ttgaagataa gcaatttgga catcgaccag tggcgttctt
     5221 acaattcaag caatctgatt caaaaaatga actccataaa ttaaaaattt ggctgtctga
     5281 taaattagaa agattcaaac agcctgttgc ctattattta ctggatatag aaaaatacca
     5341 aaaacaaggc ttaattaaac tatcaagaac acaattacaa caagatttaa aactcaaagt
     5401 attaaaggaa atctatgttt agaccgattt taaaaacatt tgtgcttagt ttaggcttaa
     5461 tgctaaatag ttatgcatta gctgaattgc caacccaaca ggtagtgcaa acgcagttag
     5521 atagcgccaa aaaattagat caagccgatg cggataataa ggcattggtt caaacacttg
     5581 aagatacgct tgctttctta gcccaaattg ataaacaaaa agcagataat caggcattga
     5641 ataaatctat tcaagattcc caaaaagcat taaaaacaag ccaacataat cttgaaaaat
     5701 taaaagaggt gactattgca agtgtcgata atttaacaca aaaagcgaca acagatttac
     5761 aaaaagagtt aacctctaca caatctcagc tggaaacagt acaacacgat ttaagtatta
     5821 ttaataataa tttagttgca caaaataccg caccggataa ggctcaaacg gccttaaccg
     5881 agatggttaa acgtaaacag gaaattagta gccaactttc agcgactaac attaaaaatg
     5941 aactacagac aaagttagaa gtagaattag aattaataga attaaaaaac acttacaatc
     6001 aaatattact tggtggcagc gaggatttat ctgcgcttta ctctgctcaa ttagatgaaa
     6061 aaaagcaaga gcagcaaaat ctacaagcag aaattgcaaa cctgcagact gctatcaaca
     6121 ataaaattgt agaagagtct cagaacaagc tagatcaagc acaagcggtt caaaatcagc
     6181 aaaataatgc aacgacgaac ccagttatct tgcgtgaatt ggatataaat accaaagtca
     6241 cacaagagtt gctaaaacag accaaagata tgacgcagtt atcacaagat aatttgcgaa
     6301 tcaaaagtgt gctagataac ttacagcaaa cccaacgtaa tattgaagaa caaatcagtt
     6361 ctctgcaagg tacgttggtg ctttctcgta ttattaataa gcaaaaacaa tcattaccac
     6421 aagatgaaat gatttccgga ctatcaaaac aaattgcaga tttacgtgta cgtgtttttg
     6481 atatcactga atttaaagac tcttttgcgg acataaatgc ttatatcagc cgcatagagc
     6541 aagatgaaaa aacaaccttt acgagtaaag agaaagaaca actgagtaaa attttacagg
     6601 aacgttctga cactttaact gagatgatta aatcattaaa taatcagctc aatttattaa
     6661 tcaatattga actaaaccag caacaagtgc agaccattag tgatgcgtta cagcaaaaac
     6721 tgcaacagca aagcttctgg gttaaaagta acaaccccat tgatcttgaa tggtttagta
     6781 aatttgtcga tattacccac tatcaattta ttgatattgg aaaaaaactc aatttttcaa
     6841 attggcggga taatttatta cctgcaagta ttttagtcgg aattttattg ctattagcca
     6901 tctttattaa tcgccaaaaa gataaaatta aacaaaaatt acaccaaatt aataatcgac
     6961 taaaaattgt cgccacagat agccaatgga acacccctct tgctattttt tggacattag
     7021 tgctttgcct gccaagtaca ctaatgttct tagccggatt tgttgctatc acttatattt
     7081 catttgaaaa tcctcaggaa gtctggactt ggggattaaa aatggcaatt tattggctgt
     7141 attttgcctt tttagtggcg atgctacgcc cgcacggcat aggacatatt cactttaata
     7201 tgccacaaaa aagtaatgaa atcttccgta atattttaaa acgttcggta tggatcattg
     7261 ctttattact gaacacctct atttttacaa acttagagat gggaatatct tacgacatgc
     7321 ttggacaaac aatgactatt tttgtcctta tattaatgat ttggatgatt gtaccggcat
     7381 ttaggcaagc tatttctacc tatgagaatg tcacaacaga agagaaaaaa gaatctaaaa
     7441 gtattttact cactattgtc aaattagtgc tactgcttgc ccctatcatt cttatcattc
     7501 tgattgcatt gggctattac tatactgcac tggtgatcat tgagcattta gtagattctt
     7561 attttgcgat cattacttgg attattattc gtaatattct ctatcgagca ttctctattt
     7621 catcacgccg tctggcttac agacgtttac aagaaaaaag agaagcagct gaagccaaaa
     7681 cacgagctaa agcagaacaa aatgatgaaa acccggacgg tgtcgagctt ccttttgagc
     7741 taaaagaaga ctctattgcc gtaagcgaag tcaagaacca aatgttgaaa ttaactgatt
     7801 ttgtgctttg gattggctta tttgtgctgc tttactgggt ttggtcggac ttaattactg
     7861 ttgcactcta cctagacggc gttaccttat ggcaacaaag tgttacaaca gaagccggga
     7921 ttgtaatgga atccattacc ctgctgaatt tactcactgc tattctgatt attgtggtaa
     7981 tggtggtact cattcggaac ttatccggtt tacttgaagc cctgattttc tcgcacttca
     8041 agttatcgca aggtacacca tacacaatta ccacactctt aacctatttg attattgcgt
     8101 taggggcaat ctttgcgttc ggtacattag ggatgtcttg gagcaagctc caatggctac
     8161 taactgcact ttctgtcggt ctgggttttg gtatgcaaga gatctttgca aacttcgttt
     8221 cagggattat catcttgttt gaacgtccaa tgcggattgg cgacaccatt accatcggca
     8281 cttacagcgg tacggtttcc aaaattcgta ttcgtgccac aaccttagtc gattttgacg
     8341 gcaaagaagt gattgtacca aacaaagcat tcgtaaccga acgcttggtg aactgggcat
     8401 taagcagcac cgcaacccgc attattgttc aagtcggcgt ggcttacggg tctgatttag
     8461 aattagtcaa acggctgtta ttacaagtgg cggaagaaaa tccgaaagtc ttgaaagatc
     8521 cacaaccaag ggcttatttc cttacctttg gtgcaagcac tttagatcac gaattaagag
     8581 cctatgtgaa cgatttatct gatcgtaacc caactattga tgcactaaat acacgcatcc
     8641 accagctctt taatgaacat aatattgata ttgcatttaa ccaattagat gtttatatca
     8701 aaaacaacga tacacaagat gaaattaaag tagattcaaa acgctttgag tttgaacgac
     8761 caaataacat aacagcaaaa gaaaaggaat aacaatggca ggcaacagca tcggacaatt
     8821 atttaaagtg accactttcg gcgaatctca cggtattgca ttaggctgta tcgtagatgg
     8881 cgtaccgccg aatatggctt taagcgaagc agatttacag ccggatttag accgccgtaa
     8941 acccggtact tcacgctaca ccacgcctcg ccgtgaagat gatgaagtgc aaattttatc
     9001 gggagtcttt gaaggcaaaa cgacgggaac aagcattggt ttaatcatta aaaacggtga
     9061 ccaacgctca caagactatg gcgacattgc cgaaaaattc cgcccggggc acgcagatta
     9121 tacctatcag caaaaatacg gcattcgaga ttaccgtggc ggtgggcgtt cttctgctcg
     9181 ggaaaccgca atgcgggttg ccgccggggc gattgccaaa aaatatttgc gtgagcaatt
     9241 tggcattgaa gtgcgaggct acctctcaca aatcggcaat atcaaaattg acccgaaaac
     9301 cgttgaaaat attgaacaaa ttgattggca cgcagtcaat agtaatcctt tcttctgccc
     9361 cgatcccgtt gcgattgaag gctttgatgc cttaattcgt gagctgaaaa aagagggcga
     9421 ttcggtgggg gcaaaattaa ccgtgattgc agagcgtgta cctgtagggt taggcgaacc
     9481 tgtgtttgac cgcctagatg ccgaccttgc ccacgcctta atgtcgatca acgccgtgaa
     9541 agcggtggaa attggcgatg gttttgcagt tgtggaacaa cgtggtagcc agcaccgaga
     9601 tgagatgacg ccgcaaggct ttctctctaa tcacgccggc ggaattttag gtggtattag
     9661 ctccggtcag ccgattatcg ctcatattgc gttaaagccg acctcaagca ttactattcc
     9721 cggcagaagc gtgaacaaaa acaacgaagc cgttgaagtg atcactaaag gcagacacga
     9781 cccctgtgta ggtattcgtg ctgtgccgat tgcagaagcg atgatggcga ttgtactact
     9841 cgaccatctg ttaagattta aggctcaatg ccgttaaaca cataaaattg gaaaaatgaa
     9901 attattaaaa acacttttag tctcaagcct tgcttttaca gctaccgcac tgaatgcaac
     9961 gcaatgggag aaaatcaaaa ctccggttca aggaaaagca caatctatcg gcggttatag
    10021 taacggctgt attattgggg cacagcccct tgcattaaaa ggcgaaggct accaagtgat
    10081 ccgctcggct cgtaaccgct attacggaca cccacaactg ctcgattatc tcactcactt
    10141 aggcaaaaaa accaaagctg ccggtgtgcc gaccatttta atcggcgata tgggaatgcc
    10201 tgccggtggg cgttttgcct ccggtcacgc ctcccatcaa accgggctgg atgctgatat
    10261 ttggtttaag ttcggaccga tggacgatga aaccgcccgc aatccagcag ggcttgccac
    10321 cattatggta aaccgtagta ccgagcgggt tgatgattca ctctggaatc aacaccatac
    10381 taatttagta aaacttgctg caaccgatcc tcgagtggat cgcatttttg tcaatcctgc
    10441 cattaaagtg aaactctgcc aaaccgcagg caatgatcgt gcttggttac gcaaaattcg
    10501 cccgtggtac ggacacgact cccatttcca cgtccgttta acctgcccgg ctgatgccgc
    10561 aagttgtgaa aatcaagccc ttgtgcctgc cggtgacggc tgtggtgaag agctttactc
    10621 gtggtttgag ccgaaagaag cctccggcac accaaaagcc aaagtgctac ccacagcgcc
    10681 tgttcaatgt cagatgattt tatctgaaca aggcttgaat taattgcaaa ataacaacct
    10741 tttttgaccg cttgtcagcc cacaagcggt tcattttctt aaataattta cgattatgcg
    10801 tttatttgtt gccgaaaaac ccagccttgc ccgagcgatt gccgatgtgt taccaaaacc
    10861 ccataccaaa ggagatggct ttatccaatg cggcgaacac gacactgtta cttggtgtat
    10921 cggtcattta ttggaacagg ctgaacccga tgtctatgat gagcgtttca aaatgtggcg
    10981 aatggaacat ttgccgattg tgcctgaaca atggaaattg attcccaaaa aagagacgct
    11041 caagcagttt aaagtggtgg aaaagctgat taaaaaagcc gatgttttag tcaatgccgg
    11101 agacccggat cgagaagggc agctgttggt ggacgaagtt tttggctatt tgaatttatc
    11161 tgctgaacgc aaaagccaaa ttcagcgttg tttggtaagc gatctcaacc cgaatgcggt
    11221 gagccgagcc attgaaaaat tgcaaaaaaa cagcgatttt ataccgcttg caacctctgc
    11281 tctcgcccga gccagagcgg attggctgta tggtatcaat atgacccgag cctataccct
    11341 acaggggcgt tgggcaggct ataaaggcgt gttatcagtc ggacgtgtgc aaacgccggt
    11401 attagggctg attgttcgcc gagatctgga gatcgagcat ttcgtgccaa aggattattt
    11461 tgaggtgttg gcacagattg tcgtgccgga aacccaagag cgatttaagg cgcagtggca
    11521 accgagcaaa gcctgtgaag attatcaaga tgaagatggg cgggtgctgt ctcgtccatt
    11581 ggcagaaaat gtggtaaaac ggattaccga ccagccggca accgtcaccg aatatcaaaa
    11641 taaaattgaa aaagaaactg caccgctgcc ttattctctt tcggtattac aaatggaagc
    11701 cgccggcaga tatgggctat ccgcccaagc ggtgttggat atttgccaaa agctgtatga
    11761 aacccataaa ctaattacct accctcgttc tgataatcgg tatttgccga ccgaacattt
    11821 caacgacaga tttaaagtga tggcggcgat tgctcatcat ttacctgaat atcaacaaaa
    11881 accggaagtg attgatgcca ctattcgcaa tcgttgctgg aatgataaag aggtggaagc
    11941 ccaccacgcc attattccca ctgcacggca agggacggta catttaaccg aaaatgaaaa
    12001 aagagtttat caactcattg cccgccaata tctaatgcaa ttctgccctg atgcggaata
    12061 tcgcaaaagt aaaatcgggc ttgaaattgc aggtggtagt tttgtcgctc aagcacgcaa
    12121 ccttgtaatt gccggctggc gagcgttact gggtaaagaa gatagccttg acgatgcaga
    12181 gccactacta ccgattgtca aaaaagggca aatcctccat tgtgaaaaag gggaaattgt
    12241 cagcaaaaaa acacaaccgc cccgccactt tactgatcgc agtttgcttt cagcaatgac
    12301 cgggatcgcc cgttttgtac aagataaaga attgaaaaaa atcttgcgtg aaaccgatgg
    12361 tttaggcacg gaggcaaccc gagccggtat tatcgaattg ctgtttaaac gtggtttttt
    12421 aatccgtaaa gggaaaaata tccacagtac cgaagccggc agaatattga ttcaagcact
    12481 tcccgactct gctacccagc cggatatgac cgctcattgg gaaatgcagc tgaatcaaat
    12541 cagcaaaaaa gagaccagct atcagcaatt tatgtttgat ctaaaccaac agctcccaca
    12601 tttattacaa agcccaaacc gccaagtgtt gcaaaattta gcgaaaatca caccgcttgc
    12661 aagcggcaat aaacctcgtt attttaaaaa gcgaacacaa actgctgaaa attaaatcaa
    12721 gcaggtaaaa attactgttt agcacttgtc aaacgggcgt aaattctata ttatgcacgc
    12781 cattgcaaat ttcgcataaa gaatacaaga gaataaatta atgttaatta atgtactcac
    12841 tattgtttat cttgtagttg ccgtattact gatcgcattt gtattaatgc aacaaggtaa
    12901 aggcgctgat gcaggtgctt ctttcggggc gggtgcttca gcaacagttt tcggctcagc
    12961 aggatcagca aattttttat caagaacaac tgctctactt gcaacgattt tcttcgcaat
    13021 tagtttagtt atcggtaatt taagctcaca caatgtagca ccgaaaagcc aatttgaaga
    13081 cttaagccaa gttgaacaaa agcaagtaga acctgtaaaa atagaaaata gcgatatccc
    13141 tcaataatcg cttaacatta aaaagaataa agctctggtg gtggaattgg tagacacgcc
    13201 atcttgaggg ggtggtggac acagtccgtg cgagttcaag tctcgcccag agcaccattc
    13261 aactaaattt ggctcaacgg agctaaacta aaaaagcctt agaaagcctg taaaatcaac
    13321 atttacaggc ttttttacta tcttaactca acggctctaa acgtttccta tcacaaattt
    13381 tagttacacg tttagttaca cgttttaaat cgtgttacta tactttcaat aatcgtgtaa
    13441 cacttcgtag gtttaattta tggctagaac aactaaagca ttaaataaaa ctcaaataga
    13501 aaatgccaaa tcaaaggata aagaatatat tttatccgat ggcgatggat taaatcttag
    13561 agttaaacct ctccctaaag gctctaaaat ttggattttt aactacacta acccacaaac
    13621 taaaaacaga acaaatttaa ctattgggcg ttacccctta attacacttg cggaagctcg
    13681 cactatatgt gatggctacc gctcgttaat agagaaaggc atagatccac aggaagaaaa
    13741 aaagcggctg caacaagaag cagaaaatcg agtaaatgat actttccgga atgtggccga
    13801 aagctatttc aatggtattt ataaagagaa agcaaaaaat ccgattactc gtgaaaagaa
    13861 ttggataagg ttagaaaatc atattttccc ctatatcggg gataaacacg ttgaagaaat
    13921 caaagtaaaa gcccttgttg atatttattc taaagtggca gataaaagca acacattaaa
    13981 aaaactgcat cagcttgtat ctgctgtaat ggatcacgcc attacgcaag gcattataga
    14041 aagccataac tgccgattag cagttaaaaa cttttatatc aagccatcta cgccaaatcc
    14101 cactattgag cttgaagaat taccgcagtt atttactgat ttacataatg cgaagttatc
    14161 aaagcaaact tacgcccttg tttgttggtc gttcttgact gctctacgcc caaatgaagc
    14221 cgttaatgct gaatggaaag aaatagactt tgagaaaaag ctatggaata tccctaaaga
    14281 gaagatgaaa ggaaaagcag ataaaaaacg ccctcactct gtgccgttat cctcccaagc
    14341 gttaaagata ttagagatga tgaaaatgca ctctaattct agcccttttg tttttccagg
    14401 tcgttcatca aatagtaaac caatgagcaa cgcaacggta aattcaacat taaaaaggaa
    14461 tggatataaa gatagactaa ccgcacacgg tattcgggca tttgtgaaaa catttctatc
    14521 ttctcgcaaa gtagatcgcc acgtttccga aagtatatta tcccatttat tagaaggtgg
    14581 agatgattta gaaaacacat acaaccgata tgatttttta gaagagcgtg tgccagtaat
    14641 gcagctttta ggtgattatt gcgaacagtg cggaatgaat ttagagttag ttcggggtta
    14701 gggaggtaaa atatatgatt ttagtcgtca cgtcatcact tttcccactt tcccctttaa
    14761 aatcaaatag ttaagtggtg atgactggtt ttaaagtcat cattaagtca tcacaaaaag
    14821 gtgatgacct agaaaaaaag aggggtttcc ccctctttgc taattcaaaa tatcactttg
    14881 aaagtcatca aaatttttga aatgaacgtt tgttcgttgc cctttattcg tctttcgttt
    14941 tgtgaaatcg tgcttattgc cgtgttgctt tactgcttgc tcaataccta ctacaaaagt
    15001 atttaagcct agttctagca cattcttagc cttaacaaag gctaaatatg ccggataaag
    15061 gtgcgttctt attttgtcgt gtccaagcgt gttgccagtt ccgatataaa gcccgtctgt
    15121 attttctgtt gtatatagat actcgaaaaa atccgttaat gggtcagact gctttttaat
    15181 ctccaacgcc tctaggctct ctttttgctc ctctaaggct cttttagctt cgagtgggtc
    15241 agggaaggta tcaagcactt tacggataat gccccctatc tctaatgtaa ttttatccat
    15301 aaaatacgga tcacgttcat tttcaggcgg tcttttatta aaacggaaat tgacaatccg
    15361 cctatctata ccgccattcc gttctgtcca tttacaaggg tcgttattga cgatcataat
    15421 cattgccgca attcttgcgt taaatgggtg cttgttcttc ggatcgactc gcaccatatc
    15481 accgccagta atcgctttca atccgccacc atctccagcg tatttcgttt gctcggaaca
    15541 gataatcagc tttttatctt ccagccctgc gattttgcgt tcatcatcaa agttttctag
    15601 ccttgctgaa gctgtgttct tttctccagc taatagtgtc gcaatgccag caaataccga
    15661 tttaccgctt ccgcctttcc ctgttacttg gaagaatact tgccagttgt agcggtttgt
    15721 taaaatcgca tagagagcgg ctagaatgtt cttcgccttg tcttgcttgc cgtctgatac
    15781 aaagttaagc cattgatcaa agtgtggtgt ttcggctacg ttctcgtcat agctatgtgg
    15841 aatataagcc gttagccagt tttggcggtt aacggttctt tgaacattta ccgaataagg
    15901 tgggtaaggg gttaaagttt cgggttgccc cttgctattc caaccaatca ccgtagccgg
    15961 ttgtacttcc attttttgaa gcgtgccgaa tggtcgggtt ttatcgttgg ctgtcgtgcg
    16021 tggataagct aagaagcctt tagcttgttt tgtgcctgta ccgttggtta aatcggtttc
    16081 ttcagtttcg acaaaggatt ctgaaatttc ttcagtcagc cagcctagaa tatctacacc
    16141 accaaagtct aaaatctctt gcgtggtttt cgggtaagcg taaatattat gaacggcaat
    16201 cgttacttca ttcattttcg gggtggcggt ttcggtgcgt gcttcgcctt caccgatatg
    16261 atttaccgct gcaccgccag ccgatactaa ttttttatat tctttgcctt gggtcagttt
    16321 caccacgtta gcaatttgtc gcataacaga atcatctgtt aggcgtttca ttacttgctt
    16381 gtcaagttcc ggaatcactg aatagccacc gtctgcccct ccatttgtat tcgtagcaag
    16441 cgaacgcaat tcgcctgttt taatccagtg gcgaagctcg tcatcagata ctttcacatt
    16501 tgcggtttca acctgttgcc ccggttggtt acgctgttca tcagtaatcg cttcataacg
    16561 tgcgatttct tttactaaat tttcagcttg tgagcggagt tcatcaaact tagccccttc
    16621 tgcttcagtt gttgagcgtt tttcttcgtc tgctttggtt aaaattgaac gcatttctgc
    16681 ttcaatagcc gctttttgtt ggcggagttc taaaagtttt ttaaacattg ccttatcctt
    16741 aattcaaata attgatattg tagtgaagcg ttgctgtttt ccacgctgat tcgttagcat
    16801 cataatcata gctatactta gccagcacac attcgtccat actgtggaat gtggcttgat
    16861 tcatcacatc actgattttt tgagccacta aatctaggtc gttttcggtt gaaaacattg
    16921 gtaagtaaat gccgattttc aaataggcgt tgcattcgcc atcgcaaagc gtgagttggc
    16981 tatattccgc ttcatcaatg aatacggcga tagccggtaa ttcattttct acatcggtga
    17041 atacggctcg gccgttatgg aaatgttgaa tgccttgaat gttaccttgt aataagtcga
    17101 taacttcttg gcggattgct tcgttagaaa tcataaaaaa gtcctcttaa ttaagaaggc
    17161 tacaattagc cacagaacaa tataggcata atttcaacgg agtaaatagg gtaaaattta
    17221 atcgtttagc tacgtttgaa cacgttaaga ggataatttt taaatgatta ttttttattc
    17281 aacaaaagac aaaatggaag gaaataaacg aataatttta tagaagtgat gactgtgact
    17341 a
//
LOCUS       DANLZQ010000046        17193 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.046, whole genome shotgun sequence.
ACCESSION   DANLZQ010000046 DANLZQ010000000
VERSION     DANLZQ010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 17193)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17193)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17193
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.046"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            268..3132
                     /locus_tag="PXE50_001346"
     CDS             268..3132
                     /locus_tag="PXE50_001346"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012771641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HDL5622260.1"
                     /translation="MTKQFTMEDRFNPSAVEQALYQHWESQGYFKPSEDINAPSYCIA
                     IPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVERKIAA
                     EEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERFTMDEGLSNAVK
                     EVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPLANGAKTAD
                     GLDYLVVATTRPETMLGDTAVAVHPEDERYQALIGKSVILPLANREIPIIADEYVDRE
                     FGTGVVKITPAHDFNDYEVGKRHGLPMVNVMTLNADIRAEAEIIGTDGKPLSDYTAPI
                     PADYQGLERFAARKKIVADFEALGLLDQIKPHDLKVPYGDRGGVPIEPMLTDQWYVSV
                     KPLAEVATKAVEDGEIQFVPKQYENLYFSWMRDIQDWCISRQLWWGHRIPAWYDEQGN
                     VYVARDEAEVRAKHNLPADLPLKQDEDVLDTWFSSGLWTFSTLGWPEQTKELKMFHPT
                     DVLITGFDIIFFWVARMIMFTMHFIKDENGKPQVPFKTVYVTGLIRDEQGQKMSKSKG
                     NVLDPIDMIDGISLDDLLEKRTGNMMQPQLAEKIAKATRKEFAEGIVAHGTDALRFTL
                     TALASNGRDINWDMKRLEGYRNFCNKLWNASRYVLTNDKLDLSEGDVEFSLADRWIES
                     QFNRTVETFRTALSQYRFDLVANAIYEFTWDQFCDWYLELTKPIFFKGTDVQRRGASR
                     TLVNVLEKLLRLIHPVMPFITEEIWQKVKGFVGIEADTIMLQKFPQFDPLAIDETAES
                     QINFIKEVIVAVRNIRAESNIAPSKGLDLIARNFSADEVSILNANEVLLKSMAKLDSV
                     KVLENGENAPLSVAKLVANGEILIPMAGFINKEAELARLTKEMDKLKGEVARIEGKLS
                     NEAFVAKAPEQVIAKEREKMQEYLSGLEKLQVQYQEIEAL"
     gene            complement(3203..3796)
                     /locus_tag="PXE50_001347"
     CDS             complement(3203..3796)
                     /locus_tag="PXE50_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylneuraminate cytidylyltransferase"
                     /protein_id="HDL5622261.1"
                     /translation="MLTDQDIFNRYQTKKSEFEKQADISLIGHSLFDMWGDMENGTPN
                     LAGKTVANLGLSGTSTRQYLDVITRQERIQHVGDNVFIFLGVNDIVKEPDYSPKQVLE
                     WIGEIVDSLRKINPNANFFLLEATPVNNITTTNNAAIKELNAYFEANIPSDLTYVKTW
                     EYFADKEGNLDLTLCHDGLHFTQAGYDRLEAILTKHL"
     gene            complement(3931..5385)
                     /gene="gnd"
                     /locus_tag="PXE50_001348"
     CDS             complement(3931..5385)
                     /gene="gnd"
                     /locus_tag="PXE50_001348"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005714317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating NADP(+)-dependent
                     phosphogluconate dehydrogenase"
                     /protein_id="HDL5622262.1"
                     /translation="MSQKGDIGVIGLAVMGQNLILNMNDNGFKVVAYNRTTSKVDEFL
                     EGAAKGTNIIGAYSLEDLAAKLEKPRKVMLMVRAGEVVDQFIEALLPHLEEGDIIIDG
                     GNSNYPDTNRRVKALAEKGIRFIGSGVSGGEEGARHGPSIMPGGDESAWQYVKPIFQA
                     ISAKTDKGEPCCDWVGRDGAGHFVKMVHNGIEYGDMQLICEAYQFLKDGLGLSYDEMH
                     EIFKEWKNTELDSYLVDITTDILAYKDEDGEPLVEKILDTAGQKGTGKWTGINALDFG
                     IPLTLITESVFARCVSAFKDQRVAASRLFNKEIGKVEGDKKVWVEAVRRALLASKIIS
                     YAQGFMLIREASEQFGWDINYGNTALLWREGCIIRSRFLGNIRDAYEANPYLVFLGSD
                     PYFKDILENCLADWRKVVAKSVEIGLPVPCMASAITFLDGYTSARLPANLLQAQRDYF
                     GAHTYERTDKARGEFFHTNWTGRGGNTASTTYDV"
     gene            complement(5468..6157)
                     /locus_tag="PXE50_001349"
     CDS             complement(5468..6157)
                     /locus_tag="PXE50_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HDL5622263.1"
                     /translation="MKTLGILGGMSAESTVSYYLDINRSVNKVLGGNSSAKILISSVN
                     FEEIVQCQKQGNWQAAAEILSEQARLLEQAGAEGILLATNTMHKIADQISSHISVPFL
                     HILDCVAEAISAQGLQKVALLGTKFTMSDNFYKDGLLERGITSIVPDEETQQEIHRII
                     FEELCLGKITESAKAFYLQTIQQLSEQGAEGVILGCTEIGLLINQNDNPLPFFDTAAL
                     HSQMAVEFILG"
     gene            complement(6167..7054)
                     /locus_tag="PXE50_001350"
     CDS             complement(6167..7054)
                     /locus_tag="PXE50_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ORF6N domain-containing protein"
                     /protein_id="HDL5622264.1"
                     /translation="MNPIQLIEPNINSKIFTIRGEQVMLDVHLAELYQVDTRTFNQAV
                     KRNEERFPDIFRFQLTENEWLSLRSQFVILNENSGRGQHRKYLPYVFTEQGIAMLSAV
                     LRSEVAVQVSIKIMQAFVQMRHLLQTNSGLVQRLESVERKQLEMSGQLEQVFQSLEGN
                     KPKMQGVFFEGETFNAYQFVTELVRGAKSSLILIDNYVDDTVLTLFTKRSHNVSVTIY
                     TKQISKQLALDLEKYNSQYAHINVKIFDKSHERFLIIDEKELYHIGASLKDLGKKWFA
                     FSKMDLSMSRILEKLAENQ"
     gene            complement(7230..7928)
                     /gene="pgl"
                     /locus_tag="PXE50_001351"
     CDS             complement(7230..7928)
                     /gene="pgl"
                     /locus_tag="PXE50_001351"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HDL5622265.1"
                     /translation="MNKVIFPTAQAAVEQIAKEFIEYSHQNRPVHISLSGGSTPKLLF
                     KTLAQAPFNTEIQWQNLHFWWGDDRMVAPTDPESNYGEVQKLLFDHIDIPSENIHRIR
                     GEENVEQELARFSAELTACVPNLAFDWIILGMGTDGHTASLFPHQTDFNDQNVAVIAK
                     YPETGQIRISKTASLIEKAKRITYLVTGASKAEILKEIQTTPAENLPYPAAKIQAENG
                     VTEWYLDSEAANLL"
     gene            complement(8068..9555)
                     /locus_tag="PXE50_001352"
     CDS             complement(8068..9555)
                     /locus_tag="PXE50_001352"
                     /EC_number="1.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HDL5622266.1"
                     /translation="MNAENSCIVIFGASGDLTFRKLIPALYNLYKIGRLGEHFSVLGV
                     SRSELTDESFRQKMRDALVKFEKASGEELDKFCEHLYYQAVNTSDAVDYAKLLPRLDE
                     LHDKYQTAGNTLYYLSTPPSLYGVIPECLAAHGLTTEEFGWKRIIVEKPFGYDIETAK
                     KLDVQIHKCFEEHQIYRIDHYLGKETVQNLLVLRFSNGLFEPLWNRNFIDYVEITGAE
                     SIGVEDRGGYYDGSGAMRDMFQNHLLQVLAMVAMEPPAIINANSMRDEVAKVLYCLHP
                     LTEEDVKHNVVLGQYARGTVDGKEVPAYLEEKGVPADSNTETFMAVKCKIDNWRWAGV
                     PFYVRTGKRLPTRVTEIVIHFKTTPHPVFSQNAPENKLIIRVQPDEGISMRFGLKKPG
                     AGFEAKEVSMDFRYSDLSSSSSLLTAYERLLLDALKGDATLFARTDAVHACWKFVQPI
                     LAYKANRGRVYEYESGTWGPTEADKLIARHGKVWRKPSGTMKKKV"
     gene            complement(9630..10448)
                     /gene="cysQ"
                     /locus_tag="PXE50_001353"
     CDS             complement(9630..10448)
                     /gene="cysQ"
                     /locus_tag="PXE50_001353"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HDL5622267.1"
                     /translation="MQTLTQPLLENIINIAKAAGEQLKQLYARSVAIKIKADCTPVTE
                     ADLIISQFLTERLKQLTPDIPVLSEEFCDIPFAERQQWQEYWIIDPIDGTQQFINRTG
                     QFSVVIALVQKREGRNQPVLGVIHAPILGKTYFSMEGSGSFLQENGEIRPLVKPKRAE
                     NALLIVTVGSDLHAEQAKNAISAPQIECVKYGSGSLKAGLVAEGKADCYIRFGDTGEW
                     DTAVAEVLLSEMGGKIFDFNFSPLTYNQRESLINPYFVMVADGSIDWDKIFLFK"
     gene            complement(10462..11004)
                     /gene="nudE"
                     /locus_tag="PXE50_001354"
     CDS             complement(10462..11004)
                     /gene="nudE"
                     /locus_tag="PXE50_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP compounds hydrolase NudE"
                     /protein_id="HDL5622268.1"
                     /translation="MIKQLPEILNIKTVAKSRIFEVQAVDLRFSNGEERTYERLTPNR
                     RSSVMVIPIQNNELIFVKEYAVGSERYELGFPKGIVDAGEEPIESANRELQEEIGFGA
                     KKLDFLRSLYSSPSHMYGLMHLFLAQDLYPSKLEGDEPEPLEIVRYPLDKIDQLLADP
                     DFAEARNLSALFMLREYLKK"
     gene            11092..11508
                     /gene="hslR"
                     /locus_tag="PXE50_001355"
     CDS             11092..11508
                     /gene="hslR"
                     /locus_tag="PXE50_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated heat shock protein Hsp15"
                     /protein_id="HDL5622269.1"
                     /translation="MKNKHEKEQNDAEVRLDKWLWAARFYKTRSIAKAMIEGGKVHYN
                     GQRAKVSKAVEIGAIIKLRQGNEEKEVEVLALSDQRRGAPEAQLLYSETEKSIKHREA
                     MAFARKANALSMPHPDRRPNKKERRDLIKFKEQEFS"
     gene            11752..12645
                     /gene="hslO"
                     /locus_tag="PXE50_001356"
     CDS             11752..12645
                     /gene="hslO"
                     /locus_tag="PXE50_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HDL5622270.1"
                     /translation="MNYTKDNDKLYRYLFKDRAVRGEWVRLNNTFTETLNTHHYPKAV
                     QNLLGEMLVATSLLTATMKFNGNITVQIQGDSPLKLAVVNGNDQQQLRALARVQADIA
                     DTASLAEMIGNGVLVISIIPTDGERYQGVIALDKPTIRECLEDYFARSEQLQTHLVIR
                     TGEFEGKAVAGGMLLQIMPDGTGSRDDFEHLATLTETVKDEELFGLEAEELLYRLYHE
                     EQVEVYPPQDTEFKCGCSRERSGSALLLVPAEEIEEMLEEKQGVIDMQCECCGTQYFF
                     DKAAIEGFKEETEKLSKLGLN"
     gene            complement(12719..13357)
                     /locus_tag="PXE50_001357"
     CDS             complement(12719..13357)
                     /locus_tag="PXE50_001357"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015431925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HDL5622271.1"
                     /translation="MQNKIDWQKVDGLLPVIVQNAQTCEVLMLGYMNQQALEKTLAEK
                     RVTFYSRTKQRLWTKGETSGNFLNVVDMSLDCDNDTLLILANPIGETCHTGAESCFHQ
                     FEQEQPDWIFFSKLERMIAERKNADPESSYTAKLYAKGTPKIVQKVGEEAVESVIAAM
                     KNDREELVGEVADLMYHLTVLLHNADLSWAEINAKLKERHKGIGLHPEGSNK"
     gene            complement(13385..13771)
                     /locus_tag="PXE50_001358"
     CDS             complement(13385..13771)
                     /locus_tag="PXE50_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDL5622272.1"
                     /translation="MIKITALDHLVLTVADMQKTIDFYTTILGMQEITFGDNRKALLF
                     GTQKINLHQKGAEILPNAQNADCGTADLCLLTVTPLQEVIYVLQRHQVEILEGGIVPR
                     TGAVGKIESVYCRDPDGNLIEISLYV"
     gene            complement(13768..14541)
                     /gene="hisF"
                     /locus_tag="PXE50_001359"
     CDS             complement(13768..14541)
                     /gene="hisF"
                     /locus_tag="PXE50_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HDL5622273.1"
                     /translation="MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAQRYAQEGA
                     DELVFYDITASSDSRTVDKSWVERVAQVIDIPFCVAGGIKTIADAEQIFAFGADKISI
                     NSPALANPELITELAKRFGVQAVVVGIDSWFEAETGKYWVNQYTGDEKRTRQTEWQLL
                     DWVEEVQKRGAGEIVLNMMNQDGVRNGYDLVQLKKVREVCQVPLIASGGAGEMVHFRD
                     AFIEANVDGALAASVFHKQIINIGELKEYLAKEGVEVRR"
     gene            complement(14523..15272)
                     /gene="hisA"
                     /locus_tag="PXE50_001360"
     CDS             complement(14523..15272)
                     /gene="hisA"
                     /locus_tag="PXE50_001360"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006995165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HDL5622274.1"
                     /translation="MQKSIIIPALDLIDGQVVRLHQGDYAKQTTYADDPIAQFADYLA
                     QGAEQLHLVDLTGAKNPAQRQTALIGKIIRETHCKIQVGGGIRTEQDVADLLAVGANR
                     VVIGSTAVKEREMVKGWFKKYGAEKFVLALDVNIDAIGQKIIAMSGWQEASGVSLEEL
                     IEDYQTVGLQHVLCTDISRDGTLAGSNVDLYREICAKYPEIQFQSSGGIGSLADIKAL
                     CGTGVAGVIVGRALLEGKFNVAEAIECWQNG"
     gene            complement(15442..16287)
                     /locus_tag="PXE50_001361"
     CDS             complement(15442..16287)
                     /locus_tag="PXE50_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage antirepressor protein"
                     /protein_id="HDL5622275.1"
                     /translation="MNEIKLFENSQIRSVWDSEKEEWFFSVVDIIEVLTQSSNPRRYW
                     SDLKRKIKDEEGGIELYEKIVQLKLKAPDGKMRETDATDLQGIFRIIQSVPSPKAEPL
                     KMWLAEVGKERIDEIIDPELTIDRALATYLKKGYSREWINQRLQAIQVRKELTDTWQD
                     HGVQVGREFAILTNEITQAWSGMTTRQYKDFKGLKKESLRDNMTTTELVLNMLAEAAT
                     KDIAQISHPQGLEENKTVAKRGGNVAKVARESLEAETGKPVITQQNAIDFAAVIEQVA
                     KQVKK"
     gene            complement(16386..16979)
                     /gene="hisH"
                     /locus_tag="PXE50_001362"
     CDS             complement(16386..16979)
                     /gene="hisH"
                     /locus_tag="PXE50_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015431920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HDL5622276.1"
                     /translation="MTNLTIIDTGCANLSSVKFAFDRLGIRAEISRDLNKIQSADKLL
                     LPGVGTAAAAMAILHDRRLIDTIRNATQPMLGICLGMQLMTDFSHEGDVATLNLMSGK
                     TERLPECGLPLPHMGWNKVQYQADHPLFHDIEQGNHFYFVHSYGVLPNENTIATCDYG
                     VPFSAAIASQNFYGVQFHPERSGEAGAKLLRNFVENV"
BASE COUNT         4766 a         3980 c         3561 g         4886 t
ORIGIN      
        1 cggtatattt cctccgacaa tcaaattaat caatttttca tccaatatag aagatgatat
       61 taaagagatt gagcaaagct gtttaaatag ccgaaagcaa ttatgggaaa aacgaagaaa
      121 aatgcaagag gaacaaaaaa ttcccaatta atcttttagt tgaccttaat ttaaataact
      181 aattacctat aaaagcattt acggcaaaga tcttttttat aagattaagc tagtgaaaaa
      241 attattaaac aagagaaaac aaaaccaatg acaaaacaat tcacaatgga agaccgtttt
      301 aacccttccg ctgtagagca agcgctctac caacactggg aatcgcaagg ctattttaag
      361 ccgagtgaag atattaatgc accgagctac tgtatcgcta ttccgccgcc gaatgtgacg
      421 gggagtttgc atatggggca cgctttccag caaaccttga tggatacgct gattcgtttt
      481 aaccgtatgg agggcaacaa taccctttgg caaacaggaa ctgaccacgc agggattgcc
      541 actcagatgg tggtggagcg taaaatcgca gcggaagaag gtaaaacccg ccacgattat
      601 gggcgtgaag cctttatcaa caaaatctgg gattggaaag cctattcggg cggcacgatc
      661 agccagcaaa tgcgtcgctt aggcaactcg attgactggg atcgtgagcg ttttacgatg
      721 gacgaaggct tatccaatgc ggtaaaagag gtgttcgttc gcttgcacga agaaggcttg
      781 atttaccgtg gcaaacgcct cgtaaactgg gatccgaaac tgcatactgc gatttctgac
      841 ttggaagtgg aaaacaaaga aagcaaaggc tcgctgtggc atttccgcta tccgctggct
      901 aatggtgcaa aaaccgcaga cggcttggat tacttagtgg tggcaacgac ccgtcctgaa
      961 acgatgttgg gcgatactgc ggtggcggtt caccctgaag atgagcgtta tcaagctctg
     1021 attggcaaaa gcgtaatcct accgcttgcc aaccgtgaaa tcccgattat tgccgatgag
     1081 tatgtggatc gtgagttcgg tacgggcgtg gtaaaaatca cccctgccca cgatttcaac
     1141 gactacgaag tgggcaaacg ccacggcttg ccgatggtga atgtgatgac cttaaatgcc
     1201 gatattcgtg cagaggccga aattatcggc acagacggta aaccgctttc cgactacacc
     1261 gccccaattc ctgccgacta tcaaggctta gagcgttttg ccgcgcgtaa gaaaattgtg
     1321 gcagattttg aagctcttgg gctgttagat caaatcaaac cacacgactt aaaagtgccg
     1381 tatggcgacc gtggtggcgt gccgattgag ccgatgctga ccgaccaatg gtatgtgtct
     1441 gtcaaacctt tggcggaagt cgcgaccaaa gcggtggaag acggcgaaat ccaattcgtg
     1501 ccgaaacagt acgaaaacct gtatttctct tggatgcgtg atattcaaga ctggtgtatc
     1561 tctcgccaat tatggtgggg acaccgcatt ccagcgtggt atgacgagca gggcaatgtt
     1621 tatgtagcac gagatgaagc ggaagtgcgt gcgaaacaca acttacctgc ggacttacca
     1681 ttaaagcaag atgaagacgt actggatact tggttctcgt ctggtctatg gacgttctca
     1741 acgttaggct ggccagaaca aaccaaagaa ctgaaaatgt tccacccgac cgatgtgctg
     1801 attaccggtt ttgacatcat cttcttctgg gtggctcgta tgattatgtt cacgatgcac
     1861 ttcatcaaag atgaaaacgg caaaccgcaa gtgccgttca aaaccgtgta tgtaacaggc
     1921 ttgatccgtg acgagcaagg gcagaaaatg tcgaaatcga aagggaacgt gttagacccg
     1981 attgatatga ttgacggcat cagtctcgac gatttgctcg aaaaacgtac aggtaatatg
     2041 atgcagccac aactggcaga aaaaatcgct aaggcaaccc gcaaagaatt tgccgaaggg
     2101 attgtggcac acggcacaga cgctctgcgt ttcaccctca ccgcccttgc cagcaacggt
     2161 cgagacatca actgggatat gaaacgttta gaaggctacc gcaacttctg caacaaactg
     2221 tggaatgcga gccgttatgt gctgaccaat gacaagttgg atttaagcga aggcgacgtg
     2281 gaatttagcc ttgccgatcg ttggattgaa agccaattca accgcacggt ggaaactttc
     2341 cgcaccgcac tcagccaata ccgtttcgac ttagtggcaa atgcgatcta cgaatttact
     2401 tgggatcaat tctgcgactg gtatttagag ctgaccaaac ctattttctt caaaggcaca
     2461 gatgtacaac gccgtggcgc aagtcgcacg ctggtgaatg tattggaaaa actcctgcgt
     2521 ttaatccacc cagtaatgcc gttcatcacc gaagaaatct ggcagaaagt gaaaggcttt
     2581 gtaggtattg aagccgatac cattatgttg caaaaattcc cacaatttga cccgcttgcc
     2641 attgatgaaa ccgccgaaag tcaaatcaac tttatcaaag aagtgattgt ggcggtgcgt
     2701 aacattcgtg cggaaagcaa catcgcacca agcaaaggtt tagatttaat cgctcgtaat
     2761 ttctctgcgg acgaagtctc tattctcaac gctaacgaag tgttgctcaa atcgatggca
     2821 aaacttgata gcgtgaaagt gctggaaaat ggtgaaaatg caccgctatc ggtagcgaaa
     2881 ctggtcgcaa atggtgagat cttgatccca atggcaggct ttatcaacaa agaagctgag
     2941 ctagctcgcc tcaccaaaga gatggataaa cttaaaggtg aagtggctcg cattgaaggc
     3001 aaactttcaa acgaagcctt tgtcgccaaa gccccagagc aagtcatcgc caaagagcgt
     3061 gaaaaaatgc aagagtacct gagtggatta gagaaattgc aggtgcagta tcaagagatt
     3121 gaagcactgt aattaactaa caagcggtca ggatttggaa attttttgct aattcagacc
     3181 gcttgcttat tgaagctttt cattataaat gtttggttaa aatcgcctct aggcggtcat
     3241 agcctgcttg ggtgaagtgt aatccatcgt ggcataaagt tagatctaaa ttcccttctt
     3301 tgtcagcaaa atattcccac gtttttacat aagtcaaatc agatggaata tttgcctcaa
     3361 aatacgcatt gagctctttt attgcagcat tattggtggt ggtaatatta ttaaccggtg
     3421 tggcttccaa tagaaaaaag ttggcatttg gattaatttt gcgaagagaa tccacaattt
     3481 cgccaatcca ctctaacact tgttttggcg agtaatccgg ctcttttaca atgtcattaa
     3541 cgcctagaaa aataaataca ttatcgccaa cgtgttgaat tcgctcttgt cgggtaatca
     3601 catccaaata ttggcgggtg ctggtgcctg ataagcccaa attggcaact gtttttcctg
     3661 ctaaattcgg cgtgccgttt tccatatcgc cccacatatc aaacagggaa tgcccaataa
     3721 gggaaatatc tgcctgtttt tcaaattctg atttttttgt ttggtagcga ttaaaaatat
     3781 cttgatcggt aagcataggt tctccttaaa tataaatgaa aaatcgctcc attattatac
     3841 aaacttgtaa acattcactc caagatattt tgaagaaaaa tccaataaaa aagccactta
     3901 atatcgaatt aagtggctca aaaagattaa ttacacatca taagtggtcg atgcggtatt
     3961 accgccacgt cctgtccagt tggtgtggaa gaactcaccg cgagctttgt ctgtacgctc
     4021 ataagtatga gcaccaaagt agtcacgttg tgcttggagt aagtttgccg gtaaacgtgc
     4081 cgaggtgtag ccatctaaga aggtaatggc tgacgccata caaggtacag gtaaaccgat
     4141 ttccaccgat tttgccacta ctttacgcca atctgccaag cagttttcca aaatatcttt
     4201 gaagtatggg tctgagccta agaacactaa atatgggttg gcttcatacg catcacgaat
     4261 gttgcctaag aaacggctgc ggataataca accttcacgc cataataggg cggtattgcc
     4321 gtagttgatg tcccaaccga attgctcaga agcctcacga atcaacataa agccttgtgc
     4381 ataagagatg attttggaag caagtaacgc acggcgtacc gcttctaccc atactttttt
     4441 gtcgccttca actttaccaa tttctttgtt aaacaatctt gaagccgcaa cacgttgatc
     4501 tttaaacgca gatacgcaac gggcgaatac cgactcggta atcagtgtta atggaatgcc
     4561 gaaatcaagg gcgttaatac cagtccattt acccgttcct ttttgacctg cggtgtcgag
     4621 aattttctct accaatggct cgccgtcttc gtctttgtag gcaagaatat cagtggtaat
     4681 atccaccaaa tagctgtcta attcggtgtt tttccactct ttaaagattt cgtgcatttc
     4741 atcatagctt aaacctaaac catcttttaa gaattggtag gcttcacaaa ttaactgcat
     4801 atcgccatat tcgataccgt tgtgaaccat tttcacaaaa tgccctgctc cgtcacgacc
     4861 aacccagtca caacaaggct cacctttgtc ggttttggct gaaattgctt ggaaaatcgg
     4921 cttcacatat tgccacgcag attcatcacc gcccggcata attgacggcc cgtgacgagc
     4981 accctcttcg ccgcccgata cacctgagcc gataaagcga atgccttttt ccgctaacgc
     5041 tttcacacgg cggttggtgt ccggatagtt tgagttaccg ccatcaatga tgatgtcgcc
     5101 ttcttctaaa tgtggcagaa gagcctcgat aaactgatcc accacctcac cggcacgcac
     5161 cattagcatc actttacgcg gtttttccaa cttcgccgct aaatcttcta acgagtaagc
     5221 accgataatg ttcgtgcctt tcgccgcacc ttctaagaac tcatccactt ttgaagtagt
     5281 gcggttgtac gccaccactt taaagccgtt gtcattcata ttcaaaatta aattttgacc
     5341 cattacggcg agtccaatca cgccgatatc gcctttttgt gacattgttt gctcctattg
     5401 tttttgattc tatgcaagcg gtcgaattgg taaaattttt tgcaaatttg accgcttgta
     5461 acatttatta acctaaaata aactccaccg ccatttggct gtgtaatgct gctgtatcga
     5521 aaaacggtaa cggattgtcg ttttggttaa tcagcaaccc gatttcggta caacctaaaa
     5581 tcacaccttc tgcaccttgt tcactaagtt gttgaatagt ctgaagataa aacgctttgg
     5641 cactttcagt aatcttgcct aaacagagtt cctcgaaaat aatgcgatga atttcttgtt
     5701 gcgtttcctc atctggtact attgatgtga taccacgctc caataaaccg tctttgtaaa
     5761 aattatcact catagtaaat tttgtgccaa ggagtgctac tttctgcaga ccttgagctg
     5821 aaatcgcctc agccacacag tccaaaatat gcaaaaacgg cacagagata tggctactaa
     5881 tttgatcggc aattttgtgc attgtgttgg ttgccaataa aatgccttct gctccggctt
     5941 gttctagcaa tctagcttgt tcagataaaa tttcagcggc tgcttgccaa tttccctgct
     6001 tttggcattg tacaatctct tcaaaattga cactcgaaat taaaatcttg gcactgctat
     6061 ttccacctaa tactttattc accgagcgat taatatctaa ataataagaa accgtgcttt
     6121 ccgcactcat tccacctaaa atgccgagtg ttttcattaa tataccttat tgattttccg
     6181 ctaacttttc taaaatgcgg ctcattgata aatccatttt agaaaaagcg aaccatttct
     6241 tacctaaatc tttaagtgat gcaccgatat gataaagctc tttttcatca ataatcaaaa
     6301 atcgctcgtg agatttatca aatattttca cattaatgtg agcatattgg ctgttatatt
     6361 tttccaaatc taatgcaagt tgcttagata tttgtttcgt ataaatcgta actgatacgt
     6421 tatgcgatcg tttcgtaaat aaagttaaaa cggtatcatc tacatagtta tcaattaaaa
     6481 tcagcgatga ttttgcacct ctcactaatt ccgtaacaaa ctgataagcg ttaaaggttt
     6541 caccttcaaa gaaaacccct tgcattttag gcttattgcc ttcaagagat tgaaacacct
     6601 gctctaactg cccagacatc tccaactgtt tacgctctac actttctaag cgttgtacca
     6661 aaccactatt tgtttgcaaa agatgacgca tttgcacaaa ggcttgcata atcttaatgc
     6721 taacttgcac cgcaacttca ctacgcaata ctgccgaaag cattgcaatg ccttgctcgg
     6781 taaagacata aggaagatat ttcctatgtt ggccacgccc actattttcg tttaagatca
     6841 caaattgtga tcttaaagat agccattcgt tttctgttaa ttgaaaacga aatatgtcag
     6901 gaaatcgctc ttcattccgt tttactgctt ggttaaaggt tcgagtatct acctgataaa
     6961 gctctgccaa atgaacatct agcattactt gctcgccacg aatagtaaaa attttagagt
     7021 taatgtttgg ttcaattaat tgaattggat tcatctttct tccttattct tcagtgaaga
     7081 tcacttttgt gatctcaaaa taagaaagac tatgccaatt tttggcctat accacgagca
     7141 gatttttctg ctttttcgat gaatatcaca aaaatacttt gcaacatttt tctaaaattt
     7201 aaccgcttgt aaaggtcact gattgtgacc tagagtaagt tagccgcctc actatccaaa
     7261 taccattccg ttaccccatt ttccgcctga attttggcgg caggataagg taaattttct
     7321 gccggagtgg tttggatttc ttttaaaatt tccgctttgc ttgctcctgt gaccaagtaa
     7381 gtgatccgtt tggctttttc aattaaagat gccgttttgg aaatgcggat ctgccctgtt
     7441 tctgggtatt tggcgatcac ggcaacgttc tgatcattaa aatctgtttg atgtgggaac
     7501 agtgaggcgg tatgcccgtc tgttcccatt cctaaaataa tccaatcaaa cgccaagttc
     7561 ggcacacaag cggtcaattc tgccgaaaat cttgcaagtt cttgttctac attctcttca
     7621 ccacgaatgc ggtgaatatt ttcgcttgga atgtcgatgt gatcgaacag taatttctgc
     7681 acttcgccgt agttactttc gggatcggtt ggggcaacca ttcgatcatc cccccaccag
     7741 aaatgcaggt tttgccattg aatttcggta ttaaacggtg cttgagctaa ggttttgaat
     7801 aataatttgg gggttgaacc accggaaagg gaaatatgca ccgggcggtt ttgatggctg
     7861 tattcaataa actctttagc aatttgttca accgcagctt gggcggtggg gaaaataact
     7921 ttattcataa tttgcctcgt tagatcaccc ctctttagaa aagaggggag ggggagattt
     7981 gattacgatt tcaatatttc gtatgagcgt atataacttc tgccaaatct cccctagccc
     8041 ctctttgcta aagaggggaa ctgaaattta cactttcttc ttcattgtac cggacggttt
     8101 tcgccatact ttgccgtgtc tggcgattaa tttatctgcc tcggttggcc cccaagtgcc
     8161 ggattcatat tcatacacac gcccacgatt agctttgtag gctaaaatcg gttgcacaaa
     8221 tttccaacaa gcgtgtacag catcagtacg ggcaaataag gttgcatcac ctttaagtgc
     8281 gtctaatagt aagcgttcat aagcggtgag taagcttgat gatgaactta aatcagaata
     8341 gcggaaatcc attgagactt ctttcgcttc aaagcctgct cccggttttt tcaagccgaa
     8401 acgcattgaa atgccttcgt ccggttgcac acgaataatc aatttatttt ccggagcatt
     8461 ttggctaaat accgggtgtg gtgtagtttt aaaatgaatt acgatttccg tcacacgggt
     8521 tggtaagcgt ttaccggttc gcacatagaa cggcacacct gcccaacgcc agttatcgat
     8581 tttacatttt accgccataa aggtttcagt gttggaatca gccggcacgc ctttttcttc
     8641 caagtaagcc ggcacttctt tgccgtctac cgtgccacga gcatactgac ctaacaccac
     8701 attgtgttta acgtcttctt cagttaacgg atgcaagcaa tatagcactt ttgcgacttc
     8761 atcacgcatt gaattagcat taataattgc cggtggctcc attgcaacca tggctaatac
     8821 ttgcaataag tggttttgga acatatcacg cattgccccc gagccatcat agtaaccgcc
     8881 acgatcttca acgccgatgg attctgcccc ggtaatttcc acataatcaa taaaattacg
     8941 gttccaaagc ggttcaaata agccgttaga aaaacgtaaa acgagtaagt tttgtaccgt
     9001 ttctttacct aaatagtggt cgatacggta gatttgatgc tcttcaaagc atttgtggat
     9061 ttgtacgtct aattttttgg cggtttcgat atcgtagccg aatggttttt caacaataat
     9121 ccgtttccag ccaaactctt cggtagttaa gccgtgagcg gctaaacatt ccggaatcac
     9181 gccatataaa cttggtggcg tggagaggta ataaagcgtg ttaccggctg tttgatattt
     9241 atcgtgtagc tcatcaagac gaggcagcaa cttggcataa tccactgcat cagaggtatt
     9301 tacagcttgg taataaagat gttcgcaaaa tttatctaat tcttcaccgc ttgctttttc
     9361 aaatttgact aacgcatcac gcattttttg gcggaaagat tcgtcggtta attctgaacg
     9421 agaaacacct aggacggaaa aatgctcgcc caatctgcca atcttatata agttataaag
     9481 agcaggaatt aatttacgaa aagttaagtc accggaagca ccaaaaatga cgatacagct
     9541 attttcagca ttcatttatt tatcctattg ctaattgtta aaattttgtt gggtgcaaga
     9601 ttatcataaa aattgctaat cggaactacc tatttgaata aaaatatttt atcccaatct
     9661 atcgagccgt cagccaccat cacaaaataa ggattaatca aactttctcg ctgattataa
     9721 gtcagcggcg aaaaattaaa gtcgaaaatt ttgccgccca tttcacttaa cagcacttct
     9781 gccacagcag tatcccattc gccggtgtca ccaaaacgga tataacaatc ggctttccct
     9841 tctgccacta aaccggcttt tagactgccc gaaccatatt ttacacactc aatttgtggg
     9901 gctgaaatgg catttttagc ttgttctgca tgtaaatcgc tgcctacggt aacaatcaaa
     9961 agggcattct ccgcacgttt cggtttgaca agcggtcgaa tttctccatt ttcttgcaaa
    10021 aagctaccgc taccttccat actaaaatag gtttttccta atatcggagc atgaataacg
    10081 cccagcaccg gctgatttct accctcacgt ttttgcacta acgcaatcac cactgaaaat
    10141 tgaccggtgc ggttaataaa ctgttgtgtg ccgtcaatcg ggtcgataat ccaatattct
    10201 tgccattgtt ggcgttcggc aaacggaata tcgcaaaact cttccgataa taccggaata
    10261 tctggtgtga gttgcttcaa gcgttcagtt aaaaattggc tgataatcag atccgcttcc
    10321 gtcaccggtg tgcaatcggc tttgatttta attgccaccg agcgggcata aagctgcttt
    10381 aactgctcac cggctgcttt ggcaatattg ataatattct cgagtagggg ttgagttagc
    10441 gtttgcataa tagctccttg cctatttttt taagtattct cgtagcataa atagagcgga
    10501 caaattccgt gcttcggcaa aatcaggatc tgccaataat tgatcaattt tatccaacgg
    10561 ataacgcaca atttccagcg gttcaggctc atcgccttcc aattttgatg ggtacagatc
    10621 ttgtgccaaa aacaggtgca ttaagccgta catatggctt ggcgaactgt aaagcgaccg
    10681 cagaaaatct aattttttcg ccccaaaacc aatttcttct tgtaattcac ggttcgcact
    10741 ctcaatcggc tcttcacctg catccacaat gcctttcgga aaacccagct cgtaacgctc
    10801 cgagccgacc gcatactctt tcacaaaaat cagctcgttg ttttgaatcg gaatcaccat
    10861 taccgaagaa cggcgattcg gcgtaagtcg ttcgtaagtt cgctcttcgc cattagaaaa
    10921 gcgtaaatcg accgcttgca cctcaaaaat gcgagatttc gctactgttt taatgttcaa
    10981 aatttcagga agttgtttta tcattttatc tcaccttttt gagttatttt agttgaaaaa
    11041 tctcactttc gctctaatat ttcgactatt gttttgattt taaggcagaa aatgaaaaat
    11101 aaacacgaaa aagaacaaaa cgacgccgaa gttcggctag ataaatggct ttgggcggct
    11161 cgtttttata aaacccgttc gattgccaaa gcaatgattg aagggggtaa agtccattat
    11221 aatgggcaaa gagctaaagt tagcaaagcg gtggagatcg gtgccatcat caaacttcgc
    11281 caaggcaatg aagaaaaaga ggtggaagtg ttagccctca gtgaccaacg ccgaggggct
    11341 ccggaagccc aactgctcta cagtgaaacc gaaaaaagca ttaaacaccg tgaggcaatg
    11401 gcatttgccc gcaaagcgaa tgctctttca atgccacacc ctgatcgccg tccaaacaaa
    11461 aaagaacggc gggatttaat caaattcaaa gagcaagaat ttagctaagc ccttgcaatc
    11521 agaaaaataa tccctatatt gaatatccta agtaggggcg aaaaattttt cgcccctata
    11581 taattatttc gggcgaacat tgattcgccc ctacagcgtt cgatttgcac atttttagcc
    11641 acaaaatgca atgcattttg aacgttggct ttgccaacgg ctccgtagga gcgaacaaaa
    11701 ttagaaataa ttttgtgagt aataatcgac cgcttgcaac gaggaatcaa aatgaattac
    11761 accaaagaca atgacaaact ctaccgctat ttattcaaag accgagcggt acggggcgaa
    11821 tgggtgcgtt taaacaacac ctttaccgag accttaaaca cccatcacta ccctaaagca
    11881 gtacaaaatt tactcggaga aatgttagtc gcaaccagtt tgctgactgc aacaatgaaa
    11941 tttaacggca acattactgt gcagattcaa ggtgacagcc cgttaaaatt ggcggttgtg
    12001 aacggtaacg accaacagca actccgtgct ttagcccgtg ttcaggcaga tattgcagac
    12061 acagcctcgt tagcggaaat gatcggcaat ggtgtattag tgatttctat tatcccaacc
    12121 gatggtgaac gttatcaagg ggtgattgct ctcgataaac caaccattcg tgaatgttta
    12181 gaagattact tcgcccgctc cgagcaatta caaacccacc tcgttatccg cacaggcgaa
    12241 tttgaaggca aagcagtggc aggcggtatg ttgctacaaa ttatgccgga cggcacaggc
    12301 tcaagagatg attttgagca tttagccacg ctcactgaaa ccgtaaaaga tgaagagtta
    12361 tttggtttag aggcagaaga attgctctat cgcctctacc acgaagagca agtagaagtt
    12421 tacccaccac aagatactga atttaaatgt ggctgctcaa gagagcgttc aggctccgca
    12481 ttattactgg tgccggcaga agaaatcgaa gaaatgttgg aggaaaaaca aggcgtgatc
    12541 gatatgcaat gtgaatgctg cgggacacaa tatttctttg acaaagcggc gattgaaggc
    12601 tttaaggaag aaactgaaaa attaagtaag ttagggttaa attaagctaa acaagcggtc
    12661 aagtttcttg tcttttttgc aatttgtaaa aaaacggtga aatttgaccg cttgcatttt
    12721 acttatttga gccttctggg tgtaacccaa tccctttgtg gcgttctttt agtttagcat
    12781 tgatctctgc ccacgagaga tcggcattgt gcaataacac cgttaagtga tacatcagat
    12841 cagccacttc accgaccaac tcttcccgat catttttcat tgccgcaatc acgctttcta
    12901 ctgcctcttc ccctactttt tggacgattt ttggcgtgcc tttggcgtaa agtttagcgg
    12961 tataagaact ttccggatca gcatttttac gttcggctat cattcgttct aatttgctga
    13021 aaaagatcca atctggttgt tcttgttcaa actgatgaaa acagctctcc gcccccgtat
    13081 ggcaggtttc gccgataggg ttagcgagga ttaacagggt gtcgttatca caatccaaac
    13141 tcatatccac cacgtttagg aaattgcccg aggtttcgcc tttcgtccac agccgttgtt
    13201 tagtacggga gtaaaaagtc actcgctttt cagccagcgt tttttcgagg gcttgttggt
    13261 tcatatatcc taacatcagt acttcgcagg tttgggcgtt ttggacgata acgggcagta
    13321 agccgtccac tttttgccag tctattttat tttgcatttt ttcttccttt ttttgaccgc
    13381 ttgtttagac atataggctt atttcaatca aattaccatc agggtcacgg caataaaccg
    13441 actcaatttt tcccactgcc cccgtacgag gcacaatccc accttccaaa atctccacct
    13501 gatgtcgctg taacacatag ataacctcct gaagtggagt taccgttaag aggcataaat
    13561 ctgccgtgcc acaatcggca ttttgggcat tgggtaggat ttctgcacct ttttggtgga
    13621 ggttgatttt ctgtgtgcca aacaaaagcg ctttgcgatt atcgccaaag gtgatttctt
    13681 gcatacccaa aatggtcgta taaaaatcaa tggttttttg catatcggca acggttaaaa
    13741 ccagatgatc taaggcagta atcttaatca tctacgcacc tcaacccctt ccttcgccaa
    13801 atattccttc aactccccaa tattgataat ttgtttatga aacacactcg ctgccaacgc
    13861 accatccaca tttgcctcaa taaaagcatc acggaaatgc accatttcgc ctgcaccgcc
    13921 tgaggcgatg agtgggactt ggcaaacttc acgcactttt ttcagttgca ccaaatcgta
    13981 gccgttgcgt acgccgtctt ggttcatcat attcagcacg atttcgcctg ctcctcgctt
    14041 ttgcacttcc tccacccaat ccaacaattg ccattcggtt tggcgggtgc gtttttcatc
    14101 gccggtatat tgattgaccc aatatttgcc ggtttctgcc tcgaaccagc tatcaatacc
    14161 aaccaccacc gcctgcacgc caaagcgctt tgccagttcg gtaatcagct cggggttggc
    14221 aagggctggg gaattgatgg agattttgtc cgctccgaaa gcgaaaatct gctccgcatc
    14281 ggcaatggtt ttgattccgc ctgccacaca gaacggaata tcaatcacct gtgccacacg
    14341 ttccacccag cttttatcca ccgttctgct gtcacttgag gcggtaatat cgtaaaacac
    14401 caactcatcc gccccctctt gggcataacg ctgggcgagt ggcacaatgt cgccgatgat
    14461 ttcgtggttg cggaactgca cgcctttcac aacttgcccg tcacgcacgt ctaaacaagg
    14521 aattatccgt tttgccaaca ttcgattgcc tccgctacat taaatttacc ttccaacaac
    14581 gcacgaccga caatcacgcc agccacgccc gtaccacaaa gcgctttgat gtcggcaagc
    14641 gagccgatac cgcctgagga ctgaaattga atctctgggt atttggcaca gatttctcga
    14701 tagagatcta catttgaacc tgccagcgtg ccgtctcggg aaatgtcggt gcataaaacg
    14761 tgttgcaagc ccacggtttg ataatcttca atcaactcct cgagcgacac accacttgcc
    14821 tcttgccagc cgctcatcgc aatgattttt tgaccgattg catcaatgtt cacatccagt
    14881 gccagcacaa atttctccgc accgtacttt ttgaaccagc ctttaaccat ttcacgctct
    14941 tttaccgcag tcgaaccaat caccacacgg tttgctccaa cagcaagtaa atccgccaca
    15001 tcctgctcgg tgcggatacc gccgcccact tgaattttgc agtgggtttc acgaataatt
    15061 ttgccgataa gtgcggtctg tctttgagcc ggatttttcg cccctgtaag atcgaccaaa
    15121 tgtaactgct ccgccccttg tgccaagtag tcggcaaatt gggcaatcgg gtcatcggca
    15181 taagtcgtct gtttcgcata atcgccctga tgtaggcgaa ctacttgccc atcgataagg
    15241 tcgagggcgg ggataatgat ggatttttgc atattattgt tcctgtgtgc ctagcacgag
    15301 ccgtgctagg ctgaataatc ccagtcgcgc tgcgactgcc tctctaagct acggagtagc
    15361 ttggtttatc tagccccata cggctcgtat ggggtacaag cggtcaaatt cttccaaaaa
    15421 cttgcaaaaa accgaccgca cttatttctt cacctgtttc gccacttgtt caatcaccgc
    15481 agcgaaatca atcgcatttt gttgcgtaat caccggtttg ccggtctctg cctccaaact
    15541 ttcccgagcc acttttgcaa catttccgcc ccgtttggca acggttttat tttcttccaa
    15601 gccctgtggg tggctgattt gagcgatgtc tttggtggca gcctcagcaa gcatattcag
    15661 caccaactcg gtggtcgtca tattgtctcg cagactttcc tttttcagcc ctttgaaatc
    15721 cttatattgg cgagtagtca taccgctcca cgcctgtgtg atttcattgg tgagaatcgc
    15781 aaattctctg cccacttgca caccgtgatc ttgccaagta tccgtcagtt cttttcgcac
    15841 ctgaatggct tgcaagcgtt ggttaatcca ctcacgggaa tatccctttt tcaagtaagt
    15901 agccaaagct cggtcaatgg tcaattcagg atcgataatc tcatcaatcc gctctttgcc
    15961 tacctctgcc agccacattt tcaacggctc ggctttcggg cttggcacag actgaataat
    16021 acggaaaatg ccttgtaaat ccgtggcatc ggtttcccgc atttttccgt ctggggcttt
    16081 taatttcaac tgtacgattt tttcgtacag ttcaattccg ccctcttcgt ccttgatttt
    16141 ccgctttaaa tcactccaat aacggcgtgg attgctactt tgcgtcagca cctcgataat
    16201 gtccaccacc gagaaaaacc actcttcttt ttcgctatcc cacaccgagc ggatttggct
    16261 gttttcaaat agtttaattt cgttcatttc tcaccttctt tcactggtta aattaacagt
    16321 aattttgtcg aaataaagcg agaaatcaag ccctattttc aaacttttcg atcgagatca
    16381 caaaatcaga cattctccac aaaattcctg agcaacttcg ccccagcctc gcccgaacgc
    16441 tcggggtgga actgtacgcc gtagaagttt tggctggcaa tggcagcgga aaacggcacg
    16501 ccgtagtcgc aggtggcgat ggtgttctca ttcggtagca caccgtagct atgcacaaaa
    16561 tagaaatgat tgccttgctc aatgtcgtga aatagcggat ggtcggcttg gtattgcacc
    16621 ttgttccagc ccatatgcgg caacggcaaa ccgcattcag gcaagcgttc ggttttgcca
    16681 ctcattaagt tcagtgttgc cacatcgcct tcgtgggaaa agtccgtcat taactgcatt
    16741 cctaagcaga tgccaagcat cggctgggtg gcgttgcgaa tggtgtcgat aagtcggcga
    16801 tcgtgcaaga tcgccatcgc cgccgctgct gttcccacac cggggagtag caatttatcg
    16861 gcagattgga ttttgttgag atctcgcgag atctcagccc gaatgccaag acggtcaaaa
    16921 gcaaatttga ccgaagacag gttggcacag cctgtgtcga tgatggtgag gttggtcatt
    16981 tagtttcctg agttaagtat ttcttatagt gaagtaaaat tgactcaata tatctgtttc
    17041 cttcaaaagc tttcttatcg aatcttttga taattgccaa aaataaacta ttaaagaaaa
    17101 aatcagattt aaaattatta tttagtaaat ctatatctag ttgctcacct tttagtttta
    17161 cacttaaaat agatttataa cattccaata act
//
LOCUS       DANLZQ010000047        16940 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.047, whole genome shotgun sequence.
ACCESSION   DANLZQ010000047 DANLZQ010000000
VERSION     DANLZQ010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16940)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16940)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16940
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.047"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            186..854
                     /locus_tag="PXE50_001363"
     CDS             186..854
                     /locus_tag="PXE50_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5622277.1"
                     /translation="MAHNGSGKSTLMRLLSGDITPTSGSILVDGLPLHQLSTKEAAKH
                     IAYLPQRLPEAADFLVQELVALGRFPYQKWLQKPTEFDVQIVEQAMESTSVTQFAKQP
                     VNSLSGGEKQRVWLAMCLAQQTPYLLLDEPLAALDIVYQVEVMQLIRKLVNEQGLTVI
                     IIIHDINLASQFCDEIIALKQGELCIQGSVDEIMQEQKLLEIFGLKLHLFNHPAGLHK
                     VAVL"
     gene            851..1732
                     /locus_tag="PXE50_001364"
     CDS             851..1732
                     /locus_tag="PXE50_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5622278.1"
                     /translation="MMFRQYKRFIFLFILQISTAFAQPNIFTPDWSIASALTEMGNPP
                     IAMGDKRIYPLWSHRPIQPNSVLDIGARYQPNRELLAQLPVELVLSNFFYAHLASVYP
                     KEIPQIDVLFDGGNTEPQQHWHTYQKATRMIGTEIKNPNAAEAYLTKTEQTLAQWGKE
                     ILNSNPDIDYYSVVQFGSPRELRIYASNSMFRVAFDLMGLKQADLGVGDRWGNKLIPV
                     SDLAKLPERTCLIVISPFSKMTQADLENSYIWQRLGFGKNRCMKVLPPVWLFGGADSI
                     SHFAEFLHNAMTQGEKE"
     gene            1732..2547
                     /locus_tag="PXE50_001365"
     CDS             1732..2547
                     /locus_tag="PXE50_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HDL5622279.1"
                     /translation="MKSSFLLIGCILLSLVTAVIRLNMVWEWEWQLLLINVDLLPINQ
                     AAVKAALLPEMTTSFLAGGLLAIASSGLQHIVRNNLASDSTLAVSSGAQLALMIAVIF
                     FPAAELFSSFWIALLGSLAAIVLVLFIAKASKLNPLTLILGGLIVNILFGAIASLLTL
                     FYFDFLFGVMVWGSGSLLQDGWATSITLAITVVVAFFIFVLLSRPLTILSLDDEQARR
                     LGAPVNLLRYLVIFVCAAITALVVSKIGVIGFIGFAVQVWLILPKYDIYYFAS"
     gene            2544..3680
                     /locus_tag="PXE50_001366"
     CDS             2544..3680
                     /locus_tag="PXE50_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDL5622280.1"
                     /translation="MIAFLAGGFLLFFTNNLIGIVSRIYDTLLPVGAFTATLGAPLLI
                     FLVLRQRKAQFEASNTAYFPVKRLNSWKLPILLLCAGVILFCLLQIIAPTMNGWAISI
                     DENLMSSYRLPRSLSAIATGAMLAVSGSLLQILTRNPMASPEVLGVSSGATIAAVLSF
                     LLFPTLSSISFLLFGVLGSLTVLALIMWLSRKLQPSALMITGVAIGALVSGLMAIIQL
                     SGSPRLTAVISWLSGSTYYANPNTVWILLSVAILLISATLLFIKPLRLISLGETVSYH
                     LGLEVKKVQMIVLLLIALMSAASTLAVGPMSFIGLMTPHLAKNLGAITPEKQIPISAL
                     LGAMLMLIADWLGRYLIFPYEIGAGIIASILGGIYFLLLLKQHK"
     gene            3708..4106
                     /locus_tag="PXE50_001367"
     CDS             3708..4106
                     /locus_tag="PXE50_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HDL5622281.1"
                     /translation="MNTLSKAIKLALYSSGIGFISTAYAETVTHLDTVEVSAETPNAS
                     SEETGRYAQKKAKGSNGMALSAKDTPQSVTAVTHQQIRDQNLNTIAKALEATHGVSVS
                     LLDRGRYSFSARGFGIDKVKVDGMDLKVSK"
     gene            4141..5844
                     /locus_tag="PXE50_001368"
     CDS             4141..5844
                     /locus_tag="PXE50_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDL5622282.1"
                     /translation="MLYDRVEVVRGATGLTTGAGDPSASVNLVRKRANSISRYTILEA
                     GIGRYADFNTMIDHSQALNNSGSVRGRFIAEHKNGNTFIKNEKERYTTLYGNIEADLT
                     DTTKLGLGVSYQKEKRDAALWGGLPAFYSDGGETNWSRSKNASPEWAYWDNESVNYFA
                     DITQKLGEKWELALKGNYRVGKHNSELFYFSGSSLNRQDGLGWSPWPGKFKNDNTQSN
                     VQLDLTGSFSAWGLEHDAAIGIQYNRAHRNSYAADNSTFDGAFDFNNWNGIYARPNWG
                     SMSEKYYQNLKEFGVYVSTRLHLTDRLSMLLGSRISSYRTEGTFYGSTQNFHANDVWT
                     PYAGLTFDINPQNTVYVSYTDIFKPQSQVDINNKLLSPVTGETYEAGWKGSYFNDNLQ
                     TQISVFETRQDNLAQSAGINPNTLLAYYTASKGAKVRGFEVEASGNVTEKLKLSAGYT
                     QWKGDDASGNPINTTQPRKQFKLFATYDMNRLVQGLTVGAGVNWQSRIYTKHATYGEY
                     GQKAYTLVNLMARYQFNDNFSAQLNIDNLFDKKYRNALSFSQYSYGEPFYTRLNLRYE
                     F"
     gene            5956..6600
                     /gene="adk"
                     /locus_tag="PXE50_001369"
     CDS             5956..6600
                     /gene="adk"
                     /locus_tag="PXE50_001369"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005721186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HDL5622283.1"
                     /translation="MKVILLGAPGAGKGTQAQFIMNKFGIPQISTGDMFRAAIKESTE
                     LGKQAKALMDEGKLVPDELTVALVKDRIAQPDCANGFLLDGFPRTIPQADALKESGVK
                     IDLVLEFDVADEVIVERMSGRRVHQPSGRTYHVVYNPPKVEGKDDVTGEDLIIRQDDK
                     PETVLERLAIYHKQTKPLIAYYTAEAEAGNTRYERLDGTKPVEEVSAELAKILS"
     gene            complement(6662..7477)
                     /locus_tag="PXE50_001370"
     CDS             complement(6662..7477)
                     /locus_tag="PXE50_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HDL5622284.1"
                     /translation="MSYKVVFSLLFSLFLSTANANWTKINDVNYTWGPFNIYHITLFT
                     ESGTYVEGTRPLMLTLQYKKPWEGRDFAVSLARTWNNLGIKLPEKELDEVITHLRKTF
                     PDIKPEDTLHYIALEDRGYFILNDKVVSDVFNKAFNDAIVAIWLDPKMDISHQLLDPS
                     YKPRAEAESIKPQVEERVAENLQEPIVNTEVSKELKADSQAVEQAPNKIDIPVADKTQ
                     ASVVNEATQPVENKDKKEPEKLEEKPKEMKIENPEVFISPIYDDILMLTKYCV"
     gene            7667..7882
                     /locus_tag="PXE50_001371"
     CDS             7667..7882
                     /locus_tag="PXE50_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HDL5622285.1"
                     /translation="MFPEFRDLITQLKQNNSHFARLFDKHNELDQRIKNMEANIELAT
                     HEEVEALKKEKLHLKDQLYAILKQESA"
     gene            complement(7941..9098)
                     /locus_tag="PXE50_001372"
     CDS             complement(7941..9098)
                     /locus_tag="PXE50_001372"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HDL5622286.1"
                     /translation="MSLDLADIRTQITNLDRNLLKLLAERHRLAFDVVRSKEITQKPL
                     RDLEREKILLQELVNFAEAENYQLDPQYVTQIFQRIIEDSVLTQQNYLQNKLNAQKEE
                     QVSIAFLGMRGSYSNMASRQFAKKYQGTLAELSCHSFNEVFEKVSLGEADFGVLPLEN
                     TTSGSINEVYDLLQHTDLTLVGELAYPIKHCVLANGTVDLAEVDTIYTHPQPAQQCSQ
                     FLAGLDKVHIKYCESSSHAMQMVARLNKPNIVALGNEDGGKLYGLTNIKTDIANQAHN
                     ITRFIVVAKEAVQVSPQVQTKTLLLMTTTQQAGALVDALMVFKNHHIRMMKLESRPIY
                     GKPWEEMFYVELEANIHSENTQKALAELEQVTSYLKVLGCYPSEIIEPVKL"
     gene            complement(9220..11286)
                     /gene="prlC"
                     /locus_tag="PXE50_001373"
     CDS             complement(9220..11286)
                     /gene="prlC"
                     /locus_tag="PXE50_001373"
                     /EC_number="3.4.24.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptidase A"
                     /protein_id="HDL5622287.1"
                     /translation="MSNPLLNYTGLPAFSQIKPEHIKPAVEAVIKECRETVEKVAQIE
                     NPTWENFYMPQAMAEDKFSRAWSPVGHLNAVKNSPELREAYQACLPLLSEYSTWAGQH
                     QGLYQGYVKLKNSPEFETYSVAQKKAIENSLQDFELSGISLPAEKQKRYGEISARLSE
                     LNSQFSNNVLDATMGWDIVITDEAQLKGLPESALEAAKLSAESKGKKGYRFTLEIPSY
                     LPVMTYCENKALREEMYRAYVTRASDQGPNAGKWDNSAVIDEILKLRHEKAQLLGFKT
                     YSDYSLATKMAENPQQVLDFLNDLAARSKAQGKNELCDLKKFAKAHFGIEHLDLWDIP
                     FYSEKQKQALYSVNDEELRPYFPENRVLSGLFEVIKRIFGMRVEEQKDVDVWHKDVRF
                     FNIFDKNDRLRGSFYLDLYARENKRGGAWMDDCINQKRLADGTLQKPVAYLTCNFNKP
                     IGDKPALFTHDEVTTLFHEFGHGIHHMLTEIDVGDVAGINGVPWDAVELPSQFLENWC
                     WEEEALAFISGHYETGEPLPKAKLEQLLAAKNFQAAMFVLRQLEFGLFDFRLHTEYDP
                     SKQGQVLALLKEVKDQVAVAKGVEWARTPHSFSHIFAGGYAAGYYSYLWAEVLSADAY
                     SRFEEEGIFNPETGQSFLDNILTRGGSEEPMVLFERFRGRKPTLDALLRHKGIVGNAE
                     PVDCTQ"
     gene            complement(11417..12157)
                     /gene="pflA"
                     /locus_tag="PXE50_001374"
     CDS             complement(11417..12157)
                     /gene="pflA"
                     /locus_tag="PXE50_001374"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate formate lyase 1-activating protein"
                     /protein_id="HDL5622288.1"
                     /translation="MSVVGRIHSFESCGTVDGPGIRFILFLQGCLMRCKYCHNRDTWD
                     LDGGKEITVEELMKEVTTYKHFMKATGGGVTASGGEAVLQMEFVRDWFRACKAEGINT
                     CLDTNGFVRHYSPVVDEMLEVTDLVLLDLKQLNDEVHQDLVGVSNKRTLDFARYLHKL
                     NKPTWVRYVVVPGYTDDDDSAHRLGQFIQGMDNIEKVELLPYHRLGAHKWETLGYKYE
                     LEGVMSPPKEDLERIQKIIESYGHTVKF"
     gene            complement(12406..13431)
                     /locus_tag="PXE50_001375"
     CDS             complement(12406..13431)
                     /locus_tag="PXE50_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence RhuM family protein"
                     /protein_id="HDL5622289.1"
                     /translation="MSKQDLIRSSVAEYLTFITATGESQVDAVYADENVWLSQKMMAV
                     LYDVDVRTISYHLKKIFSDNELAENSVIQFFWITAQDGKNYHTKHYNLSAIIAVGYKV
                     NSERAVQFRKWATEIVHSFAIKGFAMDDERLKNDGTILGKKYFEEQLARIREIRLSER
                     KFYQKITDIYATAVDYDRTATATKRFFATVQNKLHWAIHGHTAAELIMARANAEKPNM
                     GLTNWKDAPQGKIYPFDVVVAKNYLSDNELAQLQRLVSAYLDMAEDMAERQIPMTMAD
                     WETRLNRFLAATDREILQDAGKVTAEIAKSFALSEFEKYRVKQDLTYESDFDLLVKEV
                     AAKYHAG"
     gene            complement(13666..15990)
                     /gene="pflB"
                     /locus_tag="PXE50_001376"
     CDS             complement(13666..15990)
                     /gene="pflB"
                     /locus_tag="PXE50_001376"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HDL5622290.1"
                     /translation="MTQLTDAQQKAWEGFAAGEWQTEVNVRDFIQKNYTPYEGDESFL
                     AEVTPATSKLWADVMEMIKVENKTHEPYDIDCDTPSTITSHAPGYIDKSLEKIVGLQT
                     DAPLKRAIMPFGGINMVKGSCKVYRRELKPEVEQIFTEYRKTHNQGVFDVYTPDILRC
                     RKSGVITGLPDAYGRGRIIGDYRRMALYGADFLMKDKQRQFASLQARLESGEDIQATI
                     QLREEIAEQHRALGKMKEMAASYGFDISGPATNAQEAVQWTYFAYLAAVKSQNGAAMS
                     FGRVSSFLDIYIERDLKAGKITEQEAQELIDHLVMKLRMVRFLRTPEYDQLFSGDPMW
                     ATETLAGMGLDGRTLVTKNSFRILHTLYTMGPSPEPNLTILWSEQLPEAFKRYCAKVS
                     IDTSSVQYENDDLMRPDFQNDDYAIACCVSPMIVGKMMQFFGARANLAKTLLYAINGG
                     VDEKSGDQVGPKTEAITSEYLDYDDVMTRLDSFMDWLATQYVTALNIIHFMHDKYAYE
                     AALMALHDRDVFRTMACGIAGLSVAADSLSAIKYAKVKPIRTDIEIKNKAGEVVGVAK
                     NVATDFEIEGEYPQFGNNDNRVDDIAVDLVERFMKKIQKLKTYRNATPTQSVLTITSN
                     VVYGKKTGNTPDGRRSGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYAKDGISYTF
                     SIVPNALGKDYEAQKRNLAGLMDGYFHHEATVEGGQHLNVNVLNRDTLLDAVEHPEKY
                     PQLTIRVSGYAVRFNSLTKEQQMDVITRTFTESM"
     gene            complement(16080..16904)
                     /gene="focA"
                     /locus_tag="PXE50_001377"
     CDS             complement(16080..16904)
                     /gene="focA"
                     /locus_tag="PXE50_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate transporter FocA"
                     /protein_id="HDL5622291.1"
                     /translation="MFSPAEMAKIAEDGAVYKATKNQLYSFLSAITAGGFIAIAFVFY
                     TTTQVGASQMPWGMAKLIGGLVFSLGVIMCVVFGAELFTSSTLTIVARASQRINWLQM
                     FKNWVVVYFGNFVGAISIVLLIWFSGQIMAAKGQWGLVILNTAQHKIHHQWFEAFCLG
                     IFCNIMVCIAVWMSYAGKSLTDKAFIMMLPIAMFVASGFEHCVANMFMIPMGIAISHF
                     ASPEFWTAINVDPTQFADLDVSHFVFKNLIPATLGNIVGGVFFIGLMQWFLYIRKH"
BASE COUNT         4866 a         3602 c         3331 g         5141 t
ORIGIN      
        1 accgttttca taatagattt tcatctactc attttcattt tgattgattt ggtggggtaa
       61 tcccaccttt tttatgctct taaaacacaa cactatgatt caaataaatt ccattagcta
      121 ctctgttgaa caaaaccgta aactgctaag caatatttcc ctcaatttaa gcaaggggcg
      181 tttatatggc gcataacggc tcgggtaaat caacgttaat gcgtttacta agcggagata
      241 taacgcctac cagcggttca attttagtcg atggattacc acttcatcag ctttctacca
      301 aagaagcggc aaaacatatt gcctatttac cacaacgttt acctgaagcg gcggatttct
      361 tagtgcagga actggttgct ttagggcgat ttccatatca aaaatggcta caaaaaccaa
      421 cagaatttga tgttcaaatt gttgagcaag caatggaaag cacctccgtt actcagtttg
      481 ctaaacagcc tgtaaatagt ctatcaggcg gagaaaaaca acgagtttgg cttgctatgt
      541 gcttagccca acaaacaccc tatttactgc tagatgagcc attggctgcc cttgatattg
      601 tttatcaagt tgaagtaatg cagcttattc gcaagctagt gaatgaacaa ggtctaactg
      661 tcattatcat tattcacgat attaatcttg cctcccaatt ttgtgatgaa attattgcgt
      721 taaagcaagg cgaactctgt attcaaggtt ctgttgatga aattatgcaa gaacagaaat
      781 tacttgagat cttcgggcta aaactgcact tgtttaacca ccctgcaggc ttacataaag
      841 tggcggtatt atgatgttta ggcaatacaa gcggttcatt tttctcttta ttttgcaaat
      901 ttctaccgca tttgctcaac ctaatatttt tacaccagat tggtctattg cctctgccct
      961 tactgaaatg ggaaatccgc ccattgcgat gggggataag cgaatttatc cgctatggtc
     1021 gcaccgccct attcagccta atagcgtgtt agatattgga gcgcgttatc agcctaatcg
     1081 cgaattatta gcacagcttc ctgttgaatt ggtgctatca aactttttct acgctcactt
     1141 ggcttctgtt tacccgaaag aaattccaca aatagacgtg ctatttgatg gtggcaatac
     1201 tgaacctcag caacattggc atacttacca aaaagccact cgtatgattg gaacagagat
     1261 taaaaaccct aatgcggcag aagcatattt aacgaaaact gaacaaacgt tggctcaatg
     1321 ggggaaagaa atccttaaca gtaatccaga tattgattac tactctgttg ttcaatttgg
     1381 ctctccgaga gagttacgca tatatgcgtc taattcaatg ttccgtgtag cctttgattt
     1441 gatgggctta aaacaagctg atttaggtgt gggagatcgc tggggaaata aacttattcc
     1501 tgtgagtgat ttagctaaat tacccgaacg cacctgttta attgtcatct cacctttttc
     1561 taaaatgacg caagcagatt tagaaaatag ctacatttgg caacgtttag gatttggtaa
     1621 aaaccgttgt atgaaagtat taccgcctgt ttggctcttt ggtggggctg attccatctc
     1681 gcactttgct gagtttttac acaatgcaat gacacaagga gaaaaagagt aatgaaatca
     1741 tcattcttat tgattggctg tattctttta tccttagtaa cagctgttat ccgtttaaat
     1801 atggtctggg agtgggaatg gcagttacta ctcataaatg ttgatttatt gccaattaat
     1861 caagctgcgg taaaagcagc tcttttacct gaaatgacaa cgtcattttt agcaggcggt
     1921 ttattggcta tagccagcag tggcttacaa catattgtca gaaataattt agcgtcagat
     1981 agcacacttg ccgtcagtag cggggctcaa cttgcattga tgattgcggt tatctttttc
     2041 ccagccgccg agcttttttc tagtttctgg attgcgttac ttggctcttt agctgctatc
     2101 gtactggttt tatttattgc taaagcctct aagctcaatc cccttaccct tattttaggg
     2161 ggattgattg ttaatatttt gtttggagct attgcctctt tactgaccct tttctacttt
     2221 gattttttat ttggcgtgat ggtttgggga agtggctcac ttttacaaga tggttgggca
     2281 acttctatta ccttagcgat aacggtagta gttgcatttt ttatctttgt cttactctct
     2341 cgtccactca caattttaag tttagatgat gaacaagctc gccgcttagg cgcgcctgtt
     2401 aatttactac gctacttagt tatttttgtt tgtgccgcca ttacagcatt ggttgtaagc
     2461 aaaataggtg tgattggctt tattggattt gcagtgcaag tttggctcat tttgccaaaa
     2521 tacgacattt attacttcgc ctcttgattg cttttctagc gggcggattt ttactctttt
     2581 ttaccaataa tctcatcggc attgttagca gaatttacga cactctacta cctgttggtg
     2641 catttaccgc aacactaggc gcaccattat taattttctt ggtattacgc caacgtaaag
     2701 cacaatttga agcaagcaat acagcatact tccccgttaa acgcctcaat tcgtggaaac
     2761 tgccaatatt gttgttatgc gctggagtta tcctattttg tctattacaa atcattgctc
     2821 caacaatgaa tggctgggct attagcattg atgaaaacct gatgagttcc taccgcttgc
     2881 ctcgtagtct aagtgcgata gcaacagggg caatgcttgc ggtaagtggt agcctattac
     2941 aaatcttaac gagaaaccca atggcaagcc ctgaagtatt aggtgtgagt tcaggggcaa
     3001 ctattgctgc agtactgtca ttcttacttt tcccaacatt atctagcatt agcttcttgt
     3061 tatttggtgt attagggagt ttgactgttc tcgctcttat tatgtggctc tctcgtaaat
     3121 tacaaccatc agcgttaatg attacaggtg ttgctattgg agctttagtc agtggcttaa
     3181 tggctattat tcaactaagc ggcagccctc gtttaacggc agttattagt tggctgtctg
     3241 gctcaaccta ttacgctaat ccgaatacag tttggatttt attatctgtt gcaatcctac
     3301 ttatcagtgc cactttactg tttatcaaac ctttacgttt gatctcactt ggcgagaccg
     3361 tttcttacca tttagggtta gaggttaaaa aagtacaaat gattgtatta cttttaattg
     3421 ccctaatgag tgccgcctct acacttgcgg tagggccaat gagcttcatt gggctaatga
     3481 cccctcattt agctaaaaat ttaggtgcaa ttacaccgga gaaacagatc cctatatcgg
     3541 cattattagg ggcaatgcta atgctcattg ccgattggct cgggcgttat ctaattttcc
     3601 cttatgagat tggggcaggc attattgcct ctattctcgg gggtatctat ttcttactgt
     3661 tactcaaaca acataaataa ttttttattc attacttagg agaaattatg aacacgctat
     3721 ctaaagcgat aaaacttgcc ttatacagtt ctggtatagg gtttatctca acagcttacg
     3781 ctgaaacagt tactcatctt gataccgtag aagtaagtgc cgaaacgcca aatgcctcat
     3841 cggaagaaac tggacgttat gcacagaaaa aagccaaagg ctctaatgga atggcattga
     3901 gtgcgaaaga cacgccacaa agcgtaacgg ctgtaacgca tcaacaaatc agagatcaaa
     3961 atcttaatac gattgccaaa gcacttgaag caactcacgg tgtttctgtt tctttacttg
     4021 acagaggacg ctattctttc agtgctcgtg gttttgggat tgataaagtc aaggtagatg
     4081 gtatggatct caaagtaagt aaataaccaa tggacaacgg gcgaaaatac aggcaacagc
     4141 gtgttatacg accgagtaga agttgtgcgt ggtgctacag gcttaactac tggggcaggc
     4201 gatccttctg caagtgttaa tcttgttcgt aaacgagcca atagcatttc ccgttatact
     4261 attttagaag ctggaatcgg gcgttatgct gatttcaata caatgattga ccatagccaa
     4321 gcattgaata attcaggatc agtaagaggc cgctttattg cagagcataa aaacggtaat
     4381 acgttcatta aaaatgaaaa agaacgttac accacgcttt atggcaatat tgaagcagac
     4441 ttaactgaca ctaccaaact tgggttaggt gtaagctatc aaaaagaaaa acgtgatgca
     4501 gcactttggg gtggtttacc cgcattctat agcgacggtg gtgaaactaa ctggagcaga
     4561 agcaaaaatg ccagtccgga atgggcttac tgggataatg aatccgtaaa ctattttgcc
     4621 gatattacac aaaaactagg cgaaaaatgg gaacttgcat taaaaggcaa ttaccgtgta
     4681 ggcaaacata attcagaact tttctatttc agcggctcat cacttaatcg ccaagatgga
     4741 ttaggttggt cgccttggcc gggtaaattt aaaaatgata atacacaatc taatgtgcag
     4801 cttgatctta ccggttcatt ctctgcttgg ggattagaac acgatgcggc aatcggtatt
     4861 caatacaatc gagcacatcg taattcctac gctgccgata atagcacctt tgacggagct
     4921 ttcgacttta ataattggaa tggcatttat gctagaccaa actggggaag tatgtctgaa
     4981 aaatactacc aaaacttaaa agagttcggg gtgtatgttt ctacccgttt acatcttaca
     5041 gatagacttt ctatgcttct aggttctcgt atttcatcgt accgcacaga aggcactttc
     5101 tatggttcaa cacaaaactt ccacgctaac gatgtttgga caccttatgc aggattaacc
     5161 tttgatatta atccacaaaa taccgtttat gtaagttata ccgatatttt caaaccacaa
     5221 agtcaagtgg acatcaataa caaactactc tctcctgtta cgggcgaaac ctacgaagca
     5281 ggttggaaag ggagttattt caatgacaac ttgcaaactc aaattagcgt atttgaaaca
     5341 agacaagata atctagctca atctgccggt attaacccta atacattatt agcctactac
     5401 acagcctcta aaggtgcgaa agttcgaggc tttgaagtag aagcatctgg aaatgtaact
     5461 gaaaaattaa aactcagtgc aggatatact cagtggaaag gcgatgatgc ttcaggtaac
     5521 ccaattaaca caactcaacc acgcaaacaa tttaaactct ttgcaactta cgatatgaac
     5581 cgtttagtgc aaggtttaac ggtaggagca ggtgtaaact ggcaaagcag aatttatacc
     5641 aaacacgcta cttatggcga atatggtcaa aaagcttaca ctttagtgaa tttgatggct
     5701 cgttatcaat ttaatgacaa cttctcagca cagcttaaca ttgataactt attcgataaa
     5761 aaatatcgta acgccctcag ctttagccaa tatagctacg gtgagccatt ctatacacgc
     5821 ttaaatttac gctatgaatt ctaattccgt ataacaagcg gtcaaaaaat taaaaaaatt
     5881 tgcaatttta ggcagtaatc ggtaaggtta ctgcctaagt gattttatta tttttagttt
     5941 aattgaggtt ttcaaatgaa agtgatttta ttaggtgcgc cgggtgcggg caaaggtacg
     6001 caagctcagt ttattatgaa caaattcggt attccgcaaa tttcaaccgg cgatatgttc
     6061 cgtgcagcga ttaaagaaag cactgagctt ggtaaacaag caaaagcatt gatggacgaa
     6121 ggcaagttag tgccggatga attaacggtc gccttagtaa aagatcgtat tgctcaaccg
     6181 gattgtgcta atggcttctt attagacggt ttcccacgca ccattccgca agctgatgcg
     6241 ttaaaagagt caggtgtaaa aattgattta gtgttagagt ttgatgtagc tgatgaagtc
     6301 attgttgagc gtatgagtgg tcgtcgtgtt caccaacctt cagggcgtac ttaccacgtg
     6361 gtgtacaatc caccgaaagt ggaaggcaaa gatgatgtga ctggtgagga tttaattatc
     6421 cgccaagatg acaaacctga aacggtatta gagcgtttag cgatttacca caaacaaacc
     6481 aaaccgttaa tcgcctacta caccgcagaa gcagaagccg gcaacactcg ttatgagcgt
     6541 ttagatggaa caaaaccagt ggaagaagta agtgctgagt tagcgaaaat tttatcttaa
     6601 atggattatt aaaatgaaca agcggtaata tttttcgaga atattaccgc ttgttctttg
     6661 cttaaacaca atatttggtg agcattaaga tatcatcata aatcggtgaa ataaacactt
     6721 ccggattttc aatcttcatc tcctttggtt tttcttctag cttttctggc tctttcttat
     6781 ctttattctc taccggttga gtcgcttcat ttaccacact agcttgagtt ttatctgcta
     6841 caggtatatc tattttgttt ggtgcttgct ctactgcttg agaatccgct ttcagctctt
     6901 tagaaacttc agtatttacg ataggttctt gtaagttttc cgctactctt tcctctactt
     6961 gtggcttaat actttctgcc tctgctctcg gtttataaga tggatcaagt aattgatggc
     7021 taatatccat tttcggatca agccaaattg ctacaatagc atcattgaaa gctttattaa
     7081 acacatcaga gactacttta tcatttaaaa taaaataacc tctatcttct aatgcaatat
     7141 agtgcaatgt atcttcaggc ttaatatctg ggaaagtttt tctcaggtgg gtaataacct
     7201 catctaactc tttttcaggt agcttaatgc ctaaattatt ccaagttctt gctaaagaaa
     7261 ccgcaaaatc acgcccctcc cacggttttt tatattgtag agtaagcatt aaaggacgtg
     7321 taccttctac ataagtaccg ctctcagtaa aaagcgtaat atggtaaata ttaaatggcc
     7381 cccacgtata attcacatca ttaatttttg tccaatttgc atttgctgtt gataaaaata
     7441 gagaaaacaa cagcgaaaag accactttat agctcattat ttttgtgtcc ttaaatctaa
     7501 aattcctact cattattata gccttaaata tggctcacac acattataat tttcgatata
     7561 aattttgtga tcaagttcaa aaaaatagaa agatttaaca gtaaatcaac aaaaaaatgc
     7621 tagtatttaa tcaagtaaaa tttgcaacca ctattaggag ttaaatatgt ttccagaatt
     7681 tcgtgatctc ataacccaat taaagcaaaa caattcacat tttgctcgct tatttgataa
     7741 acataatgag ctagaccagc gtattaagaa tatggaggca aatattgaac tggcaacaca
     7801 tgaagaagtt gaggcactaa aaaaagaaaa attgcattta aaagaccaac tttatgcaat
     7861 tctaaaacaa gaatcggctt aacctaaagt aaaagctcag aaaatattct gagctttaat
     7921 ttcggtcata ttagacaata ttacagtttt accggctcaa taatttcgct tgggtagcaa
     7981 cccaacactt tgaggtagct ggtaacttgc tccaattccg ccaatgcttt ttgggtgttc
     8041 tcggaatgaa tatttgcctc cagctccaca taaaacatct cttcccaagg tttgccgtaa
     8101 atcgggcggg attccagttt catcatacga atatgatgat ttttgaatac cattaacgca
     8161 tcgaccaatg cacccgcctg ttgcgtggtg gtcattaaca gtaacgtttt ggtttgtacc
     8221 tgtggcgaaa cctgcacagc ctctttggca acaacaataa aacgggtgat attgtgagct
     8281 tgattagcaa tatcggtttt gatattcgtc aagccataca attttccgcc atcttcattg
     8341 cccaaggcaa caatattcgg cttattcaag cgagccacca tttgcattgc gtgcgagctg
     8401 ctttcgcaat atttgatatg tactttatct agcccggcta aaaattggct acattgctgg
     8461 gcaggctgag ggtgggtgta aatggtatcc acctccgcca aatcaaccgt gccgtttgcc
     8521 aatacacaat gtttgattgg gtacgccaat tcacccacta aggttaaatc ggtatgctgc
     8581 aataaatcat acacttcatt gatcgaacct gaagtcgtgt tttcaagcgg cagtacgcca
     8641 aaatcggctt caccaaggct gactttctca aatacttcat taaaagaatg gcagcttaat
     8701 tccgccaatg tgccttgata ttttttggca aactgtcgag atgccatatt agaataagag
     8761 cctcgcattc ccaaaaacgc aatcgaaacc tgctcttctt tttgtgcatt caatttattt
     8821 tgcagataat tttgctgagt cagcactgaa tcttcaataa tacgttggaa aatttgggtc
     8881 acatattgcg gatcaagctg gtaattctcc gcttcggcaa aatttaccag ttcttgaagc
     8941 aaaatctttt cccgttctaa atctctcaag ggtttttgtg tgatttcttt gctccgcacc
     9001 acatcaaagg ctaagcggtg gcgttctgcc agtagcttta ataaattgcg gtctaagttg
     9061 gttatttggg ttcgaatatc ggctaaatct aaagacatta tttcactctc tgtcaggcta
     9121 aatgctgaaa attataacga gttgcaaaag aaagaaaaga caagcggtca aatttacaaa
     9181 aaaatttgca aatctaaccg cttgtaaaac gtgtttactt tattgagtgc aatcaacagg
     9241 ctcggcatta cctacaatgc ctttgtgtct gagcaaggca tcaagggttg gcttacgccc
     9301 acggaagcgt tcgaacagca ccattggctc ttctgaaccg cctcgggtta agatattatc
     9361 taagaaagac tgccccgttt cagggttgaa aatcccctct tcctcaaagc gtgaataggc
     9421 atctgctgaa agcacttccg cccataaata actgtagtag cccgccgcat agccgcctgc
     9481 aaaaatatgc gagaaactgt gtggcgttct cgcccactct acgcctttgg caacagcgac
     9541 ttggtctttc acctctttaa gtaaggctaa cacttgtcct tgtttgctcg ggtcatattc
     9601 ggtgtgtagg cggaaatcaa acaagccaaa ttctaattgg cgaagcacaa acattgccgc
     9661 ttggaagttt ttcgccgcca ataattgctc taatttcgct tttggtaacg gctcgccggt
     9721 ttcataatgc cctgaaataa aggctaatgc ctcttcttcc cagcaccagt tctctaagaa
     9781 ttggcttggc agctccactg cgtcccacgg cacaccgtta atgccggcga catcgcccac
     9841 gtcaatttca gttagcatat ggtgaatgcc gtgtccaaac tcgtggaaca aagttgtcac
     9901 ttcatcgtgg gtaaacaatg ccggtttatc gccaatcggt ttattgaagt tacaggttaa
     9961 atatgccacc ggtttttgta atgtgccgtc agccaagcgt ttttggttga tgcaatcatc
    10021 catccacgcc ccaccacgtt tgttttcacg agcgtataaa tctaagtaga acgagccacg
    10081 caagcggtca tttttatcaa aaatattgaa aaaacgtaca tctttgtgcc atacatccac
    10141 atctttttgt tcttccacac gcataccgaa aatgcgttta attacttcaa ataagcctga
    10201 taatacgcga ttttccggga aatacgggcg aagttcttca tcattgaccg aatacaatgc
    10261 ctgtttttgt ttttcgctgt agaacggaat atcccataaa tccaaatgtt caatgccgaa
    10321 atgggcttta gcaaattttt tcaaatcgca taattcattt ttgccttgag ctttcgagcg
    10381 agcggctaaa tcgttcaaga aatctaatac ctgttgtgga ttttctgcca ttttggtggc
    10441 taatgaataa tcagaataag tcttaaagcc gagaagttgg gctttttcgt gacgcagttt
    10501 taagatctca tcaatcaccg cactgttatc ccatttgcct gcattcgggc cttgatcaga
    10561 agcacgagtc acataagcac ggtacatttc ctcacgcagt gctttgtttt cacaatacgt
    10621 catcaccggc aaatagcttg ggatttcaag agtgaagcga tagcctttct tacctttgct
    10681 ttctgcggat aattttgccg cttctaatgc cgattccggc aagcctttaa gctgtgcttc
    10741 atcggtaatt acaatatccc aacccattgt tgcatcaagt acgttgttgc taaattgcga
    10801 gttgagttcc gacaagcgtg cagaaatttc cccgtagcgt ttttgtttct ctgccggcag
    10861 tgaaatgcct gataattcaa aatcttgtaa gctgttttca atcgcctttt tctgtgcaac
    10921 cgaataagtt tcaaactcag ggctgttttt taacttcaca tagccttgat ataacccttg
    10981 atgttgcccc gcccaagtgc tgtattccga taataacggc aagcacgctt ggtaagcctc
    11041 acgcaactct ggggaatttt tcaccgcatt caaatgccct accggtgacc acgcacggga
    11101 gaatttatcc tctgccattg cttgtggcat atagaaattt tcccacgtcg ggttttcaat
    11161 ttgtgcgact ttttcaacag tttcacggca ttctttgatc accgcttcta ccgccggttt
    11221 gatatgttca ggtttgattt gtgagaacgc aggcaagcct gtgtaattta aaagagggtt
    11281 agacattatt ttttcctttt atggtcaaaa tgaaaattcg tatcaagata atacacaaag
    11341 tgagagagaa aagaaaacaa gcggtcatat ttcaataatt ttttgcaaaa aaatcacaaa
    11401 atatgaccgc ttgtctttag aatttgactg tatgcccgta actttcaatg attttttgga
    11461 tacgctctaa atcctcttta ggcggtgaca ttaccccttc cagctcatat ttatagccta
    11521 aggtttccca tttgtgagcc cctaaacgat gataaggcag aagttccact ttctcaatgt
    11581 tatccattcc ttgaataaac tgccctaaac gatgggcaga atcatcgtca tcagtataac
    11641 ccggcacgac cacatagcga acccaagtcg gtttatttaa tttgtgcaga taacgggcga
    11701 aatcaagggt acgcttattc gacaccccga ctaaatcttg gtgaacttca tcattgagct
    11761 gttttaaatc cagcaagacc aaatcggtca cttcaagcat ttcatccacc accgggctat
    11821 aatggcgaac aaaaccattg gtatctaagc aggtattaat gccttcagcc ttacaggcac
    11881 gaaaccaatc ccgcacaaac tccatttgca acaccgcttc cccacccgaa gctgttacac
    11941 caccgccggt tgctttcata aaatgcttat aagtcgtgac ttctttcatc agctcttcaa
    12001 ccgtaatttc cttaccacca tcaagatccc aagtatcacg attatggcaa tatttacacc
    12061 gcatcaaaca gccttgcaag aacagaataa aacgaatccc cggtccatct accgtaccgc
    12121 aggattcaaa agaatggata cgtccaacaa cagacatttg tcacctcaac cctcaaaaaa
    12181 ttttgagaaa ttgtagcaaa tttttatgtt gttcgcagaa ataaatcaca ccggtatatt
    12241 ttaagaaagg agaaagtcat actatttttt gcctatttca ggaataaact tttattaatc
    12301 tattgactcc atcaacatat caaccaaata tgtttaaatt tttgcatttt ttaaagctat
    12361 tttgaccgct tacaagcagt cggtttttct gaaaactttg caaacctagc cggcgtggta
    12421 tttggcggcg acctctttta ccagtaagtc gaaatcgctt tcgtaggtga gatcctgctt
    12481 gactcggtat ttttcaaatt cgctgagggc gaaagattta gcaatttcag cggtaacttt
    12541 gccggcatct tgtaagattt ctcggtcggt ggcggcaaga aagcggttaa ggcgggtttc
    12601 ccagtctgcc attgtcatcg gaatttggcg ttctgccata tcttccgcca tatccaaata
    12661 ggcagagacc agccgttgta gttgtgctaa ttcattatcc gataaataat ttttggcaac
    12721 caccacatca aaggggtaaa ttttgccttg cggagcgtct ttccaattcg ttagccccat
    12781 attcggcttt tcagcgttgg ctcgtgccat aatcagctcg gcggcggtat gcccgtgaat
    12841 tgcccaatgg agcttgttct gcacggtggc aaaaaagcgt ttggtggcgg ttgcggtgcg
    12901 gtcgtagtcc acggcggtag cgtaaatgtc ggtgattttt tggtagaact tgcgttcgga
    12961 taaccgaatt tcccgaatac gagcaagctg ttcttcaaag tattttttgc ccaaaatcgt
    13021 gccgtcattt ttcagccgtt catcgtccat cgcaaagcct ttaatcgcaa agctatgcac
    13081 gatttcggtt gcccatttgc gaaactgcac cgctcgctcg gaattgactt tataacccac
    13141 cgcaataatt gccgacagat tataatgctt ggtgtggtag tttttgccgt cttgggcagt
    13201 tatccaaaaa aattggataa ctgaattttc agctaactca ttgtcactaa agattttttt
    13261 gagatgatag ctaatggttc gtacatcaac atcatacaac accgccatca ttttttggct
    13321 aagccataca ttttcatcgg cgtaaacggc atcaacttgg ctttcgccgg tagctgtaat
    13381 aaaagtgagg tattccgcca cagaggaacg aattaaatct tgcttagaca tctctttctc
    13441 ccatatagaa cactgtaatt ataaacaata ttacgaaagc tgtgtaaatg aatagccaat
    13501 ttttcgagcg agatcacaaa aaaaccgctt gcggcataaa tgctacaagc ggttgattat
    13561 tactcacaaa attgtttcca attttgttcg ctcctacgga gccgtcggca aagccaacgt
    13621 tcaaaacgca atgcgttttg tggctaaaag ttttgcaaat tgtaattaca tactttcagt
    13681 gaaggtgcgg gtaattacgt ccatttgttg ctctttggtt aaagagttga aacgtaccgc
    13741 atagcctgaa acacgaatcg ttaattgcgg atatttttca gggtgttcta ccgcatctaa
    13801 taatgtatca cggtttaaca cgttcacatt taagtgctga ccgccttcta cagttgcttc
    13861 gtggtggaag tagccgtcca ttaagcctgc aaggttacgt ttttgggctt cgtaatcttt
    13921 acctaacgca tttggtacga tagagaaagt ataagaaata ccatctttcg cataggcaaa
    13981 cggtaatttc gccacagaag ttaatgaagc taccgcacct ttctggtcac gaccgtgcat
    14041 tgggttcgca cccggtccga atggagcacc tgagcgacga ccgtccggtg tattaccggt
    14101 tttcttacca tataccacgt tagaagtgat agtaagcaca gactgagtcg gcgttgcatt
    14161 gcggtatgtt ttgagttttt gaattttctt cataaaacgt tcaactaaat caactgcaat
    14221 gtcgtccaca cggttatcgt tgttaccgaa ttgcggatat tcaccctcaa tttcaaagtc
    14281 ggttgctacg tttttcgcta caccaaccac ttcgccagct ttgtttttga tttcaatatc
    14341 ggtacggatt ggttttactt tcgcatattt aatggctgaa agtgagtctg ccgctactga
    14401 aagccctgcg ataccacacg ccattgtgcg gaacacatca cggtcgtgaa gagccattaa
    14461 tgccgcttcg tatgcatatt tatcgtgcat aaagtggata atgttcagtg ctgtcacata
    14521 ttgggttgca agccaatcca taaagctgtc taagcgggtc attacatcat cgtaatctaa
    14581 gtattcactt gtaattgctt cagttttagg ccctacttgg tcgcctgatt tctcatcaac
    14641 accgccattg attgcgtata acaaggtttt cgctaagttt gcacgagcgc cgaagaactg
    14701 catcatttta cccacgatca ttggcgatac gcagcacgca atcgcatagt catcgttttg
    14761 gaaatccgga cgcattaagt catcgttttc atattgaact gatgaagtat caatagacac
    14821 tttcgcacag tagcgtttaa atgcttccgg taattgttca gaccaaagaa tagttaagtt
    14881 tggctccggt gacggcccca ttgtgtaaag ggtgtgtaaa atacggaagc tgtttttggt
    14941 tactaaggta cgaccgtcta aacccatacc ggctaaggtt tcggttgccc acattgggtc
    15001 gcctgagaat aattgatcgt attccggagt acgcaagaaa cgcaccatac gcaatttcat
    15061 tactaaatgg tcgattaact cttgggcttc ttgctcggta attttgccgg cttttaagtc
    15121 acgttcgata taaatatcta agaatgaaga cacacgaccg aaagacatcg ccgcaccgtt
    15181 ttgcgattta accgctgcaa ggtaagcgaa atatgtccat tgcaccgctt cttgtgcatt
    15241 ggttgcagga cctgaaatat caaaaccgta gcttgcagcc atctctttca ttttgcctaa
    15301 agcacggtgt tgctcggcaa tttcttcacg cagttgaatc gtggcttgaa tatcttcgcc
    15361 ggattctaaa cgagcttgta atgaggcaaa ctggcgttgt ttgtctttca ttaagaagtc
    15421 tgcaccataa agtgccatac ggcggtagtc accgataata cgaccacgac cataagcatc
    15481 cggcaaaccg gtaattacac ctgatttacg gcaacgtaaa atatccggag tgtaaacatc
    15541 gaatacccct tggttatggg ttttacggta ttcggtaaag atttgttcta cttcaggttt
    15601 aagctcacgg cgataaactt tgcacgaacc tttcaccata ttgataccac caaacggcat
    15661 aatcgcacgt tttaatggag catctgtttg cagaccaacg attttttcta acgatttatc
    15721 aatataaccc ggtgcgtgtg aggtaatggt tgatggcgtg tcgcagtcaa tatcatacgg
    15781 ttcgtgtgtt ttgttttcta ctttgatcat ttccatcaca tctgcccaca atttgctggt
    15841 tgcaggtgtt acttcagcta ggaaagactc atcaccctca taaggtgtgt agtttttttg
    15901 gataaaatca cgtacattta cttcagtttg ccactcgcct gcggcaaaac cttcccacgc
    15961 tttttgttga gcgtctgtta gttgagtcat tttaagtcct ctgtgttagt aagttaaaac
    16021 gggaaagcgg tgattttttg caaaaaattt gcaaaatttg accgcttgaa tctgaaatct
    16081 taatgctttc taatgtataa gaaccactgc attaaaccaa tgaaaaacac gccaccgaca
    16141 atattaccca gcgttgccgg aattaagttc ttaaacacaa aatgagatac atctaaatcg
    16201 gcaaattgcg ttgggtcaac attaattgct gtccaaaatt cagggctggc aaagtgcgaa
    16261 atcgcaatcc ccatcggaat cataaacata tttgccacac agtgttcaaa gccggaagcc
    16321 acaaacattg caatcggtaa catcataata aaggctttat cggttaggct tttacctgca
    16381 taagacatcc acaccgcaat gcacaccata atgttacaga aaatgcctaa acagaaagcc
    16441 tcaaaccatt ggtggtgaat tttgtgctgt gcggtattta aaataaccaa accccattgc
    16501 cctttggctg ccataatctg accactaaac caaatcaaca atacaatgga aatcgcccca
    16561 acaaagttac cgaaatacac cactacccag tttttaaaca tctgtaacca gttaattctt
    16621 tggctggctc tggctacaat cgtaagtgtt gatgaggtaa aaagttctgc cccaaacacc
    16681 acacacataa tcacgccgag tgaaaatacc aaaccaccaa tcagtttagc cataccccaa
    16741 ggcatttggc tcgcacccac ttgggttgtg gtataaaata caaatgctat tgcaataaaa
    16801 ccgcccgcag taatggcaga gagaaaggaa tataattgat tttttgttgc tttataaacc
    16861 gcaccatctt ctgcgatttt tgccatttca gcaggagaaa acatcagaca accttaacaa
    16921 tgagaattga aaaaccgata
//
LOCUS       DANLZQ010000048        16803 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.048, whole genome shotgun sequence.
ACCESSION   DANLZQ010000048 DANLZQ010000000
VERSION     DANLZQ010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16803)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16803)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16803
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.048"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(374..889)
                     /locus_tag="PXE50_001378"
     CDS             complement(374..889)
                     /locus_tag="PXE50_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000168322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDL5622292.1"
                     /translation="MAGINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNT
                     GARREVTEWHRIVFYRRQAEVCGQYLRKGSQVYVEGRLKTRKWQDQNGQDRYTTEIQG
                     DVLQMLGSRQGNDMGGQQGGWGNSAPAGNSYNQGNSNYGYNQTQSAAPQSKPAPQPEP
                     AMNNFDDDIPF"
     gene            1044..3872
                     /gene="uvrA"
                     /locus_tag="PXE50_001379"
     CDS             1044..3872
                     /gene="uvrA"
                     /locus_tag="PXE50_001379"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HDL5622293.1"
                     /translation="MQHIDIRGARTHNLKNINLTLPRDKFIVITGLSGSGKSSLAFDT
                     LYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTVT
                     EIHDYLRLLFARVGEPRCPDHDVPLAAQTISQMVDRVLEEPEGKRLMLLAPVVKERKG
                     EHVKLLENLTASGYLRARIDGEICDLSDPPALELQKKHTIEVVVDRFKVRADLATRLA
                     ESFETALDLSGSTAIIADMDDPNAEEIVFSSSFACPHCGYSLHELEPRLFSFNNPAGA
                     CPTCDGLGVEQFFDAKKVVQNEEVSLAAGAIKGWDRRSFYYFGLLKAVAEHYGFDLET
                     PFGQLPKKYQNIILNGTKEEIEFVYVNDRGDKVKRKHAFEGVLNNMARRYKETESNSV
                     REELAKYINNRPCMDCEGSRLRREARYVFLDKTNLPMVSEKSIGEALTFFEELKLAGQ
                     KEKIAEKILKEIRERLQFLVNVGLNYLSLSRSAETLSGGEAQRIRLASQIGAGLVGVM
                     YVLDEPSIGLHQRDNERLLNTLVHLRNLGNTVIVVEHDEDAIRAADHIVDIGPGAGVH
                     GGQVIAQGTAAEIMQIEESITGQFLSGKQKIEIPAQRVPYEPTKLLTLSGASGNNLKK
                     VKLEIPVGLFTCITGVSGSGKSTLVNDTLFPLAQNALNRAENSDVAPYESIDGLSHFD
                     KVIDIDQSPIGRTPRSNPATYTGLFTPIREIFAGTQEARARGYNVGRFSFNVRGGRCE
                     ACQGDGVIKVEMHFLPDVYVPCDHCKGKRYNRETLEIRYKGKTIHQVLEMTVEEAREF
                     FAPMPMIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKLATELSKRDTGKTLYILD
                     EPTTGLHFADIKQLLGVLHRLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEI
                     IATGTPEEVAKDKRSHTARFLKEILAKG"
     gene            complement(3964..5697)
                     /gene="dauA"
                     /locus_tag="PXE50_001380"
     CDS             complement(3964..5697)
                     /gene="dauA"
                     /locus_tag="PXE50_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylic acid transporter DauA"
                     /protein_id="HDL5622294.1"
                     /translation="MLNKWFLTKNAFLAVKPFSALKDALNAGYGKQHLIRDIISGLTV
                     GVIAIPLSMALAIASGVPPQHGLYTAIVAGIVIALTGGSRFNISGPTAAFVVILYPVT
                     QQFGLSGLLMATMLSGGILVLMALLRLGRLIEYIPLPVTLGFTCGIGIVIATLQIKDF
                     LGLSIEKMPEHYLGKLEAIFSALPTINWADTLVGVVTLLVLTRWHKLRLPIPGHLPAV
                     FIGTLLSLLLIHFGQNVATIGSAFHYTLSDGTTGYGIPSVLPEFVLPWNLPNAEGNRI
                     DWNLTTIQALLPAAFSMAMLGAIESLLCAVVCDNMTDTKHHSNNELLAQGLGNIASPF
                     LGGITATAAIARSAANVRSGAVSPISSVVHALLVLFALLFLAKALSYLPLSSMAALLL
                     VVAWNMADIPQIIQLTRRSGKNEIAVLLTCITLTVLFDMVIAITVGVLLASLLFIRTI
                     AEMTKSFEMAHPTDLNDVLVYRISGPLFFAAADNLFADLHNKTVHTDHQIKHIVLQCD
                     AVTVLDAGGIHALTRFVQHMLPHQQLHLCNVQFQPMRMLVRSQKTVNEIPQIQFSSDL
                     ESAFDKIRQAN"
     gene            5939..6871
                     /locus_tag="PXE50_001381"
     CDS             5939..6871
                     /locus_tag="PXE50_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5622295.1"
                     /translation="MDSLIHFLSAFLTNITWIGALELGLIYSLVALGVLISYKILDFP
                     DLTADGSFPLGGAVCVISILNQVDPWLATLYGTLAGAVAGMVTASLHIGFKIEKLLAS
                     ILMMIALYSINLRIMGMPNIAILGETTIYDVMPIESDLQLALVRLVMALLVVIIVKGL
                     FDLFFATEIGLAVRATGTNSRMAKAQGIAINKMTILGMAISNALIALGGALYVQSNGG
                     VDISIGVGTIVIGLAAVIIGEAIFSVKRIIWLTFAVIIGSILYRFFIALALNNETLNG
                     IGFGPQDLNLITALLVVIVLAVPRIKHKLLGKRG"
     gene            6873..7670
                     /locus_tag="PXE50_001382"
     CDS             6873..7670
                     /locus_tag="PXE50_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015432965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5622296.1"
                     /translation="MIELNNLFITFNKGTAIENPVLRGLSLKVEQGEFVSVIGSNGAG
                     KSTLLNAISGDCAVDSGEILIQGNKVNQSTTWQRANQVARVFQDPMAGTCESLTIEEN
                     MALAYQRGRKRGLGFAIKRQMRELFKDKLALLGLGLENRLTDQMGRLSGGQRQAVSLL
                     MASLQPSNILLLDEHTAALDPKTTDFVLELTNKIVREQKLTTLMVTHSMRQALDYGDR
                     TVMLHQGQVAFDVSGEQRQKMDVPDLLQLFQQSRHEQLSDDGLLLGN"
     gene            7757..7978
                     /locus_tag="PXE50_001383"
     CDS             7757..7978
                     /locus_tag="PXE50_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622297.1"
                     /translation="MLSIFKTPVEKETLDDWAKISVDVAKVAILAIPVILFGKEPTLI
                     KLTNLALLVLSIYVFLTLGRKLRQLKEVL"
     gene            8161..10086
                     /locus_tag="PXE50_001384"
     CDS             8161..10086
                     /locus_tag="PXE50_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HDL5622298.1"
                     /translation="MTKYDDKIQHAFSENGLLSQNISGFRPRQAQLEMAQVVAKAVKF
                     ATPVVVEAGTGTGKTFAYLVPALLSGKKTILSTGSKNLQDQLFNRDLPTIQKALKYKG
                     KIALLKGRANYLCLERLDQVTAMGVLGDKSVLTDLKKVSKWQNATKTGDLSECITIAE
                     DSPILPQLVSTTESCLGSDCPHFKDCYVVQARRKAMEADVVVVNHHLFCADMAVKKTG
                     FGELIPEAELVIFDEAHQLPDIASQYFGQSLSSRQLFDICKDTNIVYRTELKDLSQLG
                     KAADHLTKVVQDFRLLMGGEGQIRGNLRELFRDKKVVDGLVKVAENIDFLSEVAKKSL
                     GRSETLDKIFERLAEVKVQLKKLMDTSVTGYCYWYEANGRSFGLHITPLMVADKFGEQ
                     LKNQQIGWVFTSATLEVGGKFDHFCQRLGIENAEQLVLQSPFDYQHQSLLCVPRYLPD
                     TNKSNTLTALGQLLKPVIEANKGRCFLLCTSYYMMRGLADFLREHSSLNVLLQGETSK
                     SRLLEKFVKEDHSVLVATQSFWEGIDVRGDDLSLVIIDKLPFTSPDEPLLKARMEDCK
                     IQGGDPFNDIQIPEAVITLKQGVGRLIRDVTDRGVVIICDSRLVMRNYGQTFLKSLPP
                     SRRTRDLGNVIQFLKQK"
     gene            10160..10525
                     /locus_tag="PXE50_001385"
     CDS             10160..10525
                     /locus_tag="PXE50_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HDL5622299.1"
                     /translation="MLSTLLRMVASLALLFVMLYLGKLIVYLFPIGIPDSILGMLILF
                     GCLVIGIVKVEWVIPSAKPLTRYITLFFLPICVELIEHLELLRQNLNTFVLATALSTL
                     VSVVAIGVFAQWIFHYKRG"
     gene            10527..11213
                     /locus_tag="PXE50_001386"
     CDS             10527..11213
                     /locus_tag="PXE50_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HDL5622300.1"
                     /translation="MSYLYTVLTVIMFIAGLKISQKLKSSFLNPFLIALALLIGVLLI
                     FNIPYQDYYQGNSPLNNLLGVSVVALAYPFYEQLPHIRKKWRQIVVILLFSTIITMIT
                     GLGFSLLFGASQEILAAILPKSVSMPMAIIITNEINGNVAIAAVGVMIAGLVGSILGF
                     TLLRLAKVRNVMVIGLSMGAASHALGTARCLEHSMKAGSYSSIALVACGVLSSIFAPL
                     IFNVIVTLCY"
     gene            11297..13060
                     /gene="msbA"
                     /locus_tag="PXE50_001387"
     CDS             11297..13060
                     /gene="msbA"
                     /locus_tag="PXE50_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A ABC transporter ATP-binding
                     protein/permease MsbA"
                     /protein_id="HDL5622301.1"
                     /translation="MQEQITQEKDLSTLKTFKRLWPTISPFKAGLITGAVALVLNALV
                     DSSLIYLLKPLLDEGFGQANNDFLKLMAVLVVVFILVRGITNYIASYCLAWVSGKVVM
                     TLRRHIFQHLMYMPVSYFDNNPTGRLLSRVTYDTEMVASSASHSLVTIVREGAYLLSL
                     FVVMIYTSWQLSIVLFVMAPIIGVLISFVSKYFRQLSRNIQSSMGELTVTTEQMLKGH
                     KVVLSFGGQEIEKARFDRVSNDMRRKGMKVVSADGISDGVVQLIASFALSAVLYVATF
                     PEVMSENLTAGSFTVVFSSMMAMLRPLKSLTNVNSQFQRGMAACQTLFEFLDLKTEKD
                     HGLISVAKAEGNVEFKKVSFSYEGKEEKALDNISFTIPKGKTVALVGRSGSGKSTIAN
                     LLTRFYDVTDGQILLDGINIQDYRLKNLREQCSVVSQQVHLFNDTIANNIAYAAIDKY
                     SREEIIAAAKAAHAMEFIEKLENGLDTVIGENGASLSGGQRQRLAIARALLRNSPVLV
                     LDEATSALDTESERAIQSALEVLQKDRTVLVIAHRLSTIEKADEILVVDHGNIIERGS
                     HTELLAQGGAYKQLHSLQFGA"
     gene            13149..13781
                     /gene="lolB"
                     /locus_tag="PXE50_001388"
     CDS             13149..13781
                     /gene="lolB"
                     /locus_tag="PXE50_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein localization protein LolB"
                     /protein_id="HDL5622302.1"
                     /translation="MKKLTKLLSLSALLVLTACNSVLNASTEVQQPTVQIPHDDPQWQ
                     QHLAKLSQIQGYTATGQFGYISPEERFSSHFNWRYTNPIQFGLELSSNLSTKSLKLER
                     NKRGLTVSDNEGNSRSDRDVDALMQEIIGVSFPIDQFAYWVKGLPEKDGNYIVNEKRQ
                     LSQFSYPLNGTLWKASYVEYHEDRVPNLPKLIVLENGTQTLKIRIEKWAY"
     gene            13769..14623
                     /gene="ispE"
                     /locus_tag="PXE50_001389"
     CDS             13769..14623
                     /gene="ispE"
                     /locus_tag="PXE50_001389"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HDL5622303.1"
                     /translation="MGVLMKKVTLPSPAKLNLFLYITNKRADGYHELQTLFQFLDFGD
                     EIEIEITESSEVELINPVEGVATEENLIYRAAKLLQKTTACRQGCRIGIKKNLPMGGG
                     VGGGSSNAATVLVGLNHLWNTELSLEKLAELGLSLGADVPIFVRGMAAFAEGVGEVLT
                     PCDPQEKWYVVLKPEVSISTAAVFTDPNLPRNTPKRPLAELLSLPWENDCEKVVREKY
                     SAVEDLIQELLQYAQFRLTGTGACIFAEFETKAEAEQVFAHKPEAVFGFVAKGQNISP
                     LHQMLFQI"
     gene            14649..15599
                     /locus_tag="PXE50_001390"
     CDS             14649..15599
                     /locus_tag="PXE50_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HDL5622304.1"
                     /translation="MTDIKLFAGNATPELANRIAKHLYTSLGNATVGRFSDGEIQVQI
                     NENVRGGDIFIVQSTCAPTNDNLMELIVMVDALRRASAGRITAVIPYFGYARQDRRVR
                     SARVPITAKVIADFLSSVGVDRVLTCDLHAEQIQGFFDVPVDNVFGSPVLIDDILKKS
                     DLVNPIVVSPDIGGVVRARAVAKLLNDTDMAIIDKRRPKANVSQVMHIIGDVADRDCI
                     LVDDMIDTGGTLVKAAEALKERGARRVFAYATHAVFSGTAAQNLANPALDEIVVTDTI
                     PLSNEIKALNKVRVLTLSGMLAEAIRRISNEESISAMFDA"
     gene            15677..16687
                     /gene="pyrD"
                     /locus_tag="PXE50_001391"
     CDS             15677..16687
                     /gene="pyrD"
                     /locus_tag="PXE50_001391"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HDL5622305.1"
                     /translation="MYSLIRKLLFALDTEKAHQFSIQALALAGKSPFSILPTPDNPTQ
                     VMGLTFKNPIGLAAGADKNGEAIDGFGKLGFGFIEVGTITPLAQDGNPKPRQFRIVDA
                     EGIINRNGFNNKGVDVLVENVKNATYSGILGINIGKNAVTPIEHSFDDYQICLRKVYQ
                     YADYVAVNISSPNTKNLRSLQYGEALDDLLRNLKNEQAQLSQKMGKYRPLVLKIAPDL
                     TDEEIVSVADSLIRYQIDGVIAGNTTLSRESIAGLPYSEQLGGLSGKPLHSLSTRLIS
                     KLSAELGERIPIIGCGGVHSLESGQEKVNAGASLLQVYSAMIYQGPSLIQTLAKHLQL
                     NS"
BASE COUNT         4840 a         3172 c         3866 g         4925 t
ORIGIN      
        1 cgccgcccat aaagcgtgtc ggttcgagtc cgaccactgg caccactcta atatcttttc
       61 ttatttacta ttaagaattt ctctattatc ttcctatatc aatttttctc aaaatattgt
      121 atttataaac ccgtatagat gggaacttta gccgtttatg tgagaaatgg ggcaataata
      181 aatctgtcaa taagttactt attaatcgaa tgaaaagtgg atttattaat tatattaatt
      241 aatagggaac acttattact tggaagtgtt ccctattatt ttgagtaagg taggggcgct
      301 ttatatgagt agctttttat ttcatcgaaa tgcggtgtat ggaacccatg agctacttaa
      361 gtcaatactt tgattagaac ggaatatcat catcaaaatt gttcattgcc ggctcaggct
      421 gtggtgccgg tttagattgc ggtgcagcac tttgggtttg gttgtaacca taattgctgt
      481 tgccttgatt gtagctatta cccgcaggag cagaatttcc ccaaccgcct tgctgaccgc
      541 ccatatcatt accttgacgg ctgccgagca tttgtagcac atcgccttga atttcggtgg
      601 tgtaacgatc ttgcccgttt tggtcttgcc atttacgggt ttttaaacgt ccttctacgt
      661 aaacttgaga gcctttacgt aaatattgcc cgcatacttc tgcttgacgg cggtagaata
      721 caatacgatg ccactcggtt acttcacggc gtgcaccggt gtttttatcc gtccagcttt
      781 ctgaggttgc cacactaata tttgcaaccg cttcgccatt tggcattgta cgcatttcag
      841 ggtcgttacc taaattaccg acaataatta ctttattgat accagccata aaatcctctg
      901 tttgataaat taaactaaaa tttgctaagt attctacctg aaaatccaaa agatgaacac
      961 caaaaaactg atattttgta cagttttatt aaaatatgcg ataatgatcg aaaattgaga
     1021 aaatagcact ggacattaaa aatatgcaac atatcgatat tcgtggagca agaacacaca
     1081 acttaaaaaa catcaattta accttgccga gagataaatt cattgtaatt accgggcttt
     1141 ccggctcggg caaatcgtct ctggcgtttg atacgctcta tgcggaagga caacgccgtt
     1201 atgtagaatc actgtctgca tacgcccgcc agtttctctc cttaatggaa aagcctgatg
     1261 tggatcatat tgaagggctt tcccctgcga tttcgattga gcaaaaatca acctctcaca
     1321 acccacgttc gaccgtagga acggtaacgg aaattcacga ctatttacgt ttattgtttg
     1381 ctcgagtggg cgagcctcgt tgccctgacc acgatgtgcc attggctgct caaactattt
     1441 cgcagatggt ggatcgagta ttggaagaac cggaaggaaa acggttgatg ctacttgccc
     1501 ctgtggtgaa agagcgtaaa ggcgaacacg taaaattatt ggaaaatttg accgctagtg
     1561 gctatttgcg ggctagaatt gacggtgaaa tttgcgattt atccgaccca ccggcattag
     1621 aattacagaa aaaacacacc attgaagtgg tggtggatcg ctttaaagta agggctgatc
     1681 tagccacccg tttggcggaa tcttttgaaa cagcgttaga tttatccggc tctaccgcaa
     1741 ttattgcaga tatggacgac ccaaatgccg aagaaattgt gttttcgtcc agctttgctt
     1801 gtccgcattg tggttactct ttacacgaat tagaaccacg ccttttctcg tttaacaacc
     1861 cggcaggtgc ttgcccgact tgtgatggtt tgggcgttga gcagtttttt gatgccaaaa
     1921 aagtagtgca aaatgaagag gtttcattag ccgccggtgc gatcaaaggc tgggatcgcc
     1981 gcagtttcta ctattttggc ttattaaaag ccgttgccga gcattatggc tttgatttag
     2041 aaaccccatt cgggcagcta ccgaaaaaat atcaaaacat tattttaaac ggcactaaag
     2101 aagagattga gtttgtttat gtcaatgacc gaggcgataa ggtcaaacgt aaacacgctt
     2161 ttgaaggggt gctgaataat atggctcgcc gctataaaga aaccgaatca aactcggtgc
     2221 gtgaagagtt ggcgaagtat attaataatc gtccttgtat ggattgcgaa ggctcacggt
     2281 tacgccgtga agcccgttat gtattcttag ataaaaccaa tttgccgatg gtttcggaaa
     2341 aaagtatcgg cgaggcatta accttttttg aagagctgaa attagccggt cagaaagaaa
     2401 aaattgctga gaaaatcctc aaagaaattc gtgaacggct acagttttta gtgaatgtcg
     2461 gcttgaatta tctttctctt tcccgctcgg cagaaaccct ttcaggtggc gaggctcagc
     2521 ggattcgcct tgccagccaa attggtgcgg gtttagtagg ggtaatgtat gtgctggatg
     2581 agccttccat cggcttgcac caacgagaca atgaacgcct actgaatact ttggtgcatt
     2641 tacgcaattt aggcaatacc gtgattgtgg ttgaacacga tgaagatgcg atccgagccg
     2701 cagatcatat cgtggatata ggcccgggtg ccggtgtaca cggtgggcaa gttatcgcac
     2761 aaggtacggc agctgaaatt atgcaaattg aggaatctat taccggacaa ttcctctcag
     2821 gcaagcaaaa aattgagatt ccggctcagc gtgtgcctta tgagccaact aaattgctca
     2881 ccttatcggg agcaagtggt aacaacttga aaaaagtgaa attagagatt ccggttggtt
     2941 tatttacttg tatcacgggt gtatcaggtt cgggcaaatc aactttagtt aatgacacac
     3001 tattccctct ggcacagaat gcgttaaacc gagcggaaaa cagcgatgtt gctccttatg
     3061 aatcgattga cggcttatcg cattttgaca aggtaattga tattgaccaa agcccgattg
     3121 ggagaactcc tcgctcaaat ccggcaactt acaccggatt atttacgcca attcgtgaga
     3181 tttttgccgg cacgcaagaa gctcgagcca gagggtataa cgtagggcgg tttagcttta
     3241 atgtgcgggg cggacgttgc gaagcctgtc aaggtgacgg cgtgattaaa gttgaaatgc
     3301 acttcttgcc tgatgtgtat gtgccttgcg atcactgtaa aggcaaacgc tataaccgtg
     3361 aaaccttgga aattcgctat aaaggcaaaa ctattcacca agtgttagag atgacggtgg
     3421 aagaggcgag agaatttttt gcccctatgc cgatgattgc ccgcaagttg caaaccttga
     3481 tggacgtggg gttatcttat atccgtttag ggcaatcttc tactacgctc tcaggcggtg
     3541 aagcccaacg ggtgaaattg gcgaccgagc tttccaaacg agacaccggc aaaacgctct
     3601 atattttaga tgaaccgacc accggcttgc attttgccga tattaaacag ttactcggcg
     3661 tgctacatcg cctgcgtgat caaggcaata cgattgtggt gatcgaacat aatttagatg
     3721 tgattaaaac cgcagactgg attgtcgatc ttggccctga aggtggcagt ggcggcggtg
     3781 aaattattgc taccggcaca ccggaagaag tggcaaaaga caaacgttct cacaccgcac
     3841 gcttcttaaa agagattttg gctaaaggct aacgttcaac acaagcggtc atattttcgg
     3901 aaaatgttgc aatttgcaaa aagttggaaa atatgaccgc ttgttttata tccggagtta
     3961 ttcctagtta gcctgtctga ttttgtcgaa ggcagattca agatcgctac tgaattgaat
     4021 ttgcgggatt tcgtttaccg ttttttgtga gcggactagc attctcatcg gctgaaattg
     4081 cacattacag agatgaagtt gttgatgtgg caacatatgc tgtacaaagc gggttagggc
     4141 gtgaatgcca ccagcatcta atactgtaac ggcatcgcat tgcagcacaa tatgtttaat
     4201 ttggtgatcg gtatgtacgg ttttattgtg cagatcggca aagagattat cggcggcagc
     4261 aaaaaataac ggaccgctga tccgataaac caacacatcg ttcaaatcgg ttgggtgagc
     4321 catttcaaag gatttagtca tttctgcaat agtacggata aatagcaggc ttgccagtaa
     4381 cacccctacc gtaatggcaa ttaccatatc aaataatacc gtgagggtaa tgcaagtcag
     4441 taaaaccgca atttcatttt tacctgaacg gcgggtaagt tgaatgattt gtggaatatc
     4501 tgccatattc caagctacta ccaataatag tgcagccatt gaggaaagag gcaaatagga
     4561 aagtgcttta gccaaaaaga gtagggcaaa taaaaccaac aaggcgtgaa ccacactaga
     4621 aatgggggaa actgccccgg aacgaacatt ggcagccgat ctcgcaatcg ctgctgtggc
     4681 ggtaattccc cctaaaaatg gcgaggcaat attacctaag ccttgggcta atagttcgtt
     4741 gttagagtgg tgcttggtat ctgtcatatt atcgcacact accgcacata ataacgattc
     4801 gatagcccca agcattgcca ttgaaaaggc agccggtaat aaggcttgaa tggtggttaa
     4861 gttccaatct atccgattcc cctctgcatt cgggagattc caaggtaaca caaattcagg
     4921 taatacgctt gggataccat acccagtggt gccgtcagag agcgtgtagt ggaatgctga
     4981 gccgatagtg gcaacgtttt gtccgaaatg aatcagcagt aatgataaca gcgtgccgat
     5041 aaagacggcg ggtaaatgcc cgggaatagg caaccgtagc ttgtgccaac gagttaaaac
     5101 caacaatgtt acgacaccca ctaaggtgtc agcccaattt atggttggca atgctgaaaa
     5161 aatagcctct agcttgccaa gatagtgttc aggcattttt tcaatgctta agcccagaaa
     5221 atctttgatt tgcaaggtgg cgatcacaat accgatgcca caggtaaaac ccagtgtgac
     5281 aggtagagga atgtattcaa ttaagcgtcc taatcggagt aacgccatca atactaaaat
     5341 tcctccggaa agcattgttg ccatgagtaa tccacttaag ccaaactgct gcgtgacggg
     5401 gtatagaatc accacaaaag cggctgttgg gcctgaaata ttaaatcttg aaccgcctgt
     5461 tagggcaatc acaatcccgg caacaatcgc cgtatataaa ccgtgctgtg gtggcacacc
     5521 gctggcaatc gccaacgcca tagataacgg aatagcaata acgccaacgg ttaagcctga
     5581 aataatatct ctgattaaat gttgtttacc ataacctgca ttgagagcat cttttaatgc
     5641 actaaaaggc ttgacggcaa gaaaagcatt tttagttaaa aaccatttat ttaacataga
     5701 atgttcgagt gaagagaatg tttcgcttat tttactgcaa tgaataaaat taaatttgag
     5761 ctaacgcaag aaaaagcagg aaagacgaaa tatgttggag acaagcggtt gttttaggcg
     5821 aaaaatttgc aaatacaaat aattagctga ttttattttg aaaatagcgt aaaatgccac
     5881 tttaatttgt actactatag tagtgcattt gtgtgatttc attaactata ataaacaaat
     5941 ggacagtctt attcattttt tgagtgcctt tttaactaat atcacttgga ttggggcgtt
     6001 agagctgggg ttaatttatt cccttgttgc ccttggggta ttaatttctt ataaaattct
     6061 ggattttccg gatctgaccg cagacggcag tttcccttta ggaggggcgg tgtgtgtgat
     6121 cagcattttg aatcaagttg atccttggct ggcaacttta tacggcacgc ttgccggagc
     6181 agtagccggt atggttactg caagtttgca tatcggcttt aaaatcgaaa aattgcttgc
     6241 cagtatttta atgatgatcg cactctattc gattaatcta cgcattatgg gaatgccgaa
     6301 tattgctatt ttaggcgaaa ccacgattta cgatgtaatg ccgattgaaa gcgatctaca
     6361 gttagcctta gtacgattag tgatggcatt gctggttgtt attatcgtaa aaggtttgtt
     6421 tgacctcttt tttgcgaccg aaatcggttt ggctgtgcgg gcaaccggta ctaatagtcg
     6481 aatggcgaaa gcacagggta ttgcgattaa taaaatgacg attttaggga tggcgatttc
     6541 taatgcgtta attgccttag gtggtgcttt gtatgtgcaa agcaacggtg gtgtagatat
     6601 ttcgattggg gtaggaacta tcgtgattgg cttggcggcg gtaattatcg gggaagcaat
     6661 tttttcggta aaacggatta tttggcttac ctttgcggtg attattggct caattcttta
     6721 tcgtttcttc atcgcactag cattaaataa cgaaacttta aacggcattg gctttggccc
     6781 gcaagatctg aatttaatta cggcgttatt ggtggtgatt gtattagcgg ttcctcgaat
     6841 taaacacaaa ttgctcggta agcgaggtta atatgattga actcaataac ttatttatta
     6901 ccttcaacaa agggacagca attgagaacc ctgtgctgag aggcttatcc ctaaaagttg
     6961 agcaaggcga atttgtgtcg gtaattggta gcaatggggc gggtaaatct accttattaa
     7021 atgcgatcag tggtgattgt gcggtggact ccggtgagat tttaattcaa ggaaataagg
     7081 taaaccaatc caccacttgg caacgggcaa atcaagtcgc ccgagttttc caagacccga
     7141 tggctggcac ttgtgaaagt ttaacgattg aagaaaatat ggcactggct taccaacgtg
     7201 gacgtaaacg tgggttgggc tttgcgatca aacgccaaat gcgagagtta ttcaaagaca
     7261 aacttgcttt gttagggcta ggtttggaaa atcggcttac tgatcaaatg gggcgtttat
     7321 caggcgggca acgccaagcg gtgagcttgc tgatggcatc acttcagccg tctaatatct
     7381 tattgttaga tgaacacacc gcggcactgg atccgaaaac caccgatttt gtgcttgaac
     7441 ttaccaataa aattgtaaga gaacagaaat taaccacgct aatggtaacg cattcaatgc
     7501 ggcaagccct tgactatggc gatagaaccg tgatgttaca ccaagggcaa gtggcgtttg
     7561 atgtttcggg cgagcaacgg caaaaaatgg acgtgccgga tctgttacaa cttttccaac
     7621 aaagtcgcca cgagcagttg agtgacgatg gattattact cggcaattaa ttttgcgatc
     7681 tgcatcgaaa aaatgaattt ctccttttgt ttttggctgt caaattttaa ataataagcc
     7741 caaaaggagg tattcaatgt taagcatttt caaaacaccg gtagagaaag aaacgctaga
     7801 cgattgggct aaaatttcgg ttgatgtagc gaaagttgcg attttggcaa ttcctgttat
     7861 actttttggc aaagaaccaa cgttgattaa attgactaac ttagcattat tggtattgag
     7921 tatttatgtt tttttgacgc ttgggcgaaa attacggcag ctaaaggagg tgttgtgatg
     7981 gaactaggct ggaatttaac cataggtttg ctaattttaa acgtctttgc gtttgcttgg
     8041 ctttatatta ttaaccggat ttctaaagaa caattatcca aaaatcaata atatttaatt
     8101 tttcacaagc ggttgttttt gcaaaatatt ttgtaaattc gaccgcttgc ctgtttttaa
     8161 atgacaaaat acgacgataa aattcagcat gcatttagcg aaaatgggtt gctcagccaa
     8221 aatatcagtg gatttcgacc acgccaagca cagcttgaaa tggctcaagt ggtcgcaaaa
     8281 gcagtaaaat ttgcgacacc tgttgtggta gaggcgggaa ccggcacagg caaaaccttt
     8341 gcttatcttg tgccggcact actttcaggc aagaaaacta ttctttcgac aggttctaaa
     8401 aacctgcaag atcaactttt taatcgagat cttcccacta ttcaaaaagc cctgaaatac
     8461 aaaggcaaaa ttgcgttact caaagggcgt gcgaactatt tgtgtttaga gcgtttagat
     8521 caagtgaccg caatgggcgt acttggggat aaatccgttc ttaccgattt aaaaaaagtc
     8581 agtaaatggc aaaatgccac taaaacaggg gatttaagtg aatgtattac cattgccgaa
     8641 gatagcccga ttctaccgca gttagttagc accaccgaga gttgcttagg ctcggactgc
     8701 ccgcatttta aagattgtta tgtggtacaa gcccgccgta aagcgatgga ggcagacgta
     8761 gtggtggtaa accatcacct attctgtgct gatatggcag taaaaaagac cggttttggt
     8821 gagttgatcc ctgaagctga gctggtgatc tttgatgaag ctcaccaact gccggatatt
     8881 gccagccaat attttgggca atcgctttct tcccgccagt tatttgatat ttgtaaggat
     8941 accaatattg tttaccgcac tgaactcaaa gatctgtctc aattaggcaa agcggctgat
     9001 cacttgacga aagtagtgca agatttccga ttattgatgg gcggagaagg gcagattcga
     9061 ggcaatttgc gagagttatt tcgtgataaa aaagtggtcg atggcttggt aaaagtggct
     9121 gaaaatattg attttttaag tgaagtggcg aaaaaatcgc tggggcggtc ggaaacgttg
     9181 gataaaattt tcgagcggtt agcagaagtt aaggttcaac ttaaaaaatt aatggatact
     9241 agtgtgacag gctattgtta ctggtatgag gcgaatggac gatcctttgg gctgcatatt
     9301 acgccgctta tggtggcaga taaatttggt gaacagttga agaaccagca aattggttgg
     9361 gtgtttacct cagccacact cgaagttggg ggcaaattcg atcatttttg tcaacggctg
     9421 ggcatcgaaa atgcggagca gttggtgtta caaagtccgt ttgattacca acatcaatct
     9481 ttactctgtg tgccccgcta cttgccggat accaataaat ccaatacttt aactgctctc
     9541 gggcaattat taaaaccggt gattgaggcg aataaagggc gttgtttctt gctttgtact
     9601 tcctattata tgatgcgagg tttagccgac tttttacgcg aacacagttc gctgaatgtg
     9661 ttattgcaag gcgaaaccag caaaagccgt ttattggaaa aatttgtgaa agaagatcac
     9721 agcgtgttgg tggcgaccca aagtttttgg gaggggattg atgtgcgagg cgatgattta
     9781 tcgttggtga ttattgataa attgccgttc acttcaccgg acgaaccatt actcaaagcc
     9841 cgaatggaag attgtaagat acagggcggt gatccgttta acgatattca aattcccgaa
     9901 gcggtgatta ccctcaaaca aggtgtaggg cgtttaattc gtgatgtgac cgatagaggt
     9961 gtagtgatta tttgtgattc ccgtttggtg atgcgaaatt atgggcaaac tttcttgaaa
    10021 agtttaccgc cgtctagacg cactagagat ttggggaatg ttattcaatt tttgaaacaa
    10081 aaatagggtt acaagcggtc agatttctgc agatttttgc aaaaaaacgg ataaaaataa
    10141 ccgcttgttg aggagttata tgttgtctac attgctgcgt atggttgctt ctttggcatt
    10201 gttatttgtg atgctttatt taggcaagtt aatcgtttat ctattcccca tcgggatccc
    10261 ggatagtatt ttaggtatgc ttatcttatt cggctgcttg gttatcggca ttgttaaagt
    10321 ggaatgggtg ataccgagcg cgaaaccgct cacacgttat ataacactat ttttccttcc
    10381 gatttgtgtc gaactcatcg aacatcttga gctgttacgc caaaatctga acacttttgt
    10441 attagcaacg gcattaagca ccttagtttc tgtggtcgcg attggcgtgt ttgcacagtg
    10501 gatttttcat tacaagagag ggtaaaatga gctatcttta cactgtgttg acggtaatca
    10561 tgtttattgc cggtttgaaa atcagccaaa aactcaagag cagttttctg aaccctttct
    10621 taattgcact cgctttgcta attggtgtat tactgatttt taatatccct taccaagact
    10681 attatcaagg taattccccc ttgaataact tacttggcgt ttctgttgtg gcacttgctt
    10741 acccttttta tgaacaatta ccccatatcc gtaaaaaatg gcgacagatt gtcgtgattt
    10801 tgctgtttag taccatcatt acgatgataa ccgggcttgg gttttcatta ttatttgggg
    10861 caagccaaga gatcttagcc gccattttgc ctaaatcggt atcaatgcca atggcaatta
    10921 ttattacgaa tgaaattaat ggaaatgttg caatcgcagc ggttggggtg atgatcgcag
    10981 gcttagtggg atctatttta ggctttacgc ttctgcgcct ggcaaaagta agaaatgtga
    11041 tggtgattgg gttaagtatg ggagctgctt cccacgcatt aggcacggca agatgcttag
    11101 agcatagtat gaaagccggt agctatagtt ctatcgcatt agtggcttgt ggtgtgctgt
    11161 cttctatatt tgcaccttta atatttaacg ttatcgtcac gttatgttac taaaaacagt
    11221 gaaatctcaa accttatttg gtaactggct gaaatcaagg tacaataccg tgatttttca
    11281 atgaaaatag agaattatgc aagaacaaat aacacaagaa aaagatcttt ctacgcttaa
    11341 aacctttaag cgtttatggc cgactatcag cccgtttaaa gcgggtctga ttacaggtgc
    11401 tgtcgcttta gtattaaatg cgttagtgga ttctagtctt atctatctcc tcaaaccctt
    11461 gctagatgaa ggctttgggc aagctaataa tgattttctg aaattgatgg cggtgcttgt
    11521 agtagttttt attttagtgc gcggtattac caattatatt gccagttact gtttagcttg
    11581 ggtgtcaggc aaggtggtaa tgacattacg ccgccatatt tttcaacatt taatgtatat
    11641 gccggtaagc tattttgata acaacccgac cgggcgtttg ctctcacgag tgacttacga
    11701 taccgaaatg gtggcgagtt ctgcttctca ttctttagtg actattgtgc gtgaaggggc
    11761 ttatctgctg tcattgtttg tggtgatgat ctataccagt tggcagcttt ctattgtgtt
    11821 atttgtgatg gctcctatca ttggggtact gatcagtttc gtttcaaaat attttcgtca
    11881 attaagtcgc aatatccaaa gttcaatggg ggagcttact gtcacgacag aacaaatgct
    11941 taaagggcat aaggttgtac tttcctttgg tgggcaggaa attgagaaag cacgttttga
    12001 tcgagtcagt aatgatatgc gtcgtaaagg gatgaaagtc gtttctgctg atggcatttc
    12061 tgatggtgtg gtacagctta tcgcctcttt tgcgttatct gctgtgcttt atgttgcgac
    12121 cttccccgag gtgatgagtg agaatttaac cgcaggttca ttcacagtag tgttttcttc
    12181 gatgatggca atgttacgtc ctctaaaatc actcaccaat gtgaactcgc aattccaacg
    12241 tggaatggca gcctgccaaa cgttatttga atttttagat ttaaaaactg aaaaagatca
    12301 cggcttaatc tccgttgcta aagctgaagg caatgtggaa tttaaaaagg taagctttag
    12361 ttatgaaggt aaagaggaaa aagcactcga taatatttct ttcaccattc ctaaaggcaa
    12421 aacagtagca ttggttgggc gttccggctc gggtaaatca actattgcca atttgcttac
    12481 ccgtttttat gatgtgactg acggtcaaat tttgcttgat ggaattaata ttcaagatta
    12541 ccgcttaaaa aacttaagag aacaatgctc ggtggtttct caacaagttc atttgtttaa
    12601 cgatactatt gctaataata ttgcttatgc tgcaatcgac aaatacagcc gagaagaaat
    12661 tattgctgct gcaaaagctg cacacgcaat ggaatttatc gaaaaattgg aaaatggctt
    12721 agacactgta attggtgaaa atggcgcaag tctttccggt gggcaacgcc aacgcttggc
    12781 aatcgctcgt gcattactgc gaaattctcc tgtgcttgtg ctggatgaag ctacctctgc
    12841 attagatacg gagtcagaaa gagcgatcca atctgcactt gaagtgctac agaaagatcg
    12901 tacggtgttg gtcatagcac accggttatc aacgattgaa aaagccgatg aaattttggt
    12961 agtcgatcac ggaaatatta ttgagcgtgg cagccatacg gaattgttag cacaaggtgg
    13021 ggcttataaa caactccata gtttacaatt cggagcctaa tttgtagggg agaaatatgt
    13081 ttctccccaa ttaatgataa aaacagggcg aaaaatattt cgtccctaca ataatttatt
    13141 tggatactat gaaaaaactg acaaaacttt tatctcttag tgctttactg gtcttaaccg
    13201 cctgtaattc ggtactaaat gcctcaacag aggtgcaaca accaacagta caaattccgc
    13261 atgacgatcc acaatggcag cagcatttag cgaaactgag ccaaattcaa ggctatactg
    13321 caacggggca atttggctat atttcgcctg aagagcgttt ttcttcccat ttcaactggc
    13381 gttatactaa tccaatccaa tttgggttag agctttcctc gaatctctcg actaaatcac
    13441 tgaaattaga gcgtaataaa cgaggcttaa cggtttcgga caatgagggt aatagccgtt
    13501 ctgaccgtga tgttgatgcg ttaatgcaag agattatcgg tgtttcgttt cctatcgatc
    13561 agtttgccta ttgggtaaaa ggcttgcctg aaaaagatgg caactatatt gtgaatgaaa
    13621 aacgccagct gtcgcaattt agttatccgc ttaatggcac gctttggaaa gcaagctatg
    13681 tggagtatca cgaagatcgt gtaccaaact taccgaagct gattgtgctt gaaaacggca
    13741 ctcaaacgtt gaagatccgc attgaaaaat gggcgtatta atgaagaaag tcaccttacc
    13801 cagcccggca aaattaaacc tgtttttata cattaccaat aagcgggcag acggttatca
    13861 cgagctacaa acgctgtttc agtttttaga ttttggtgat gaaattgaga ttgagatcac
    13921 agaaagttca gaggttgaat taattaatcc ggtagaaggg gtggcaactg aggagaatct
    13981 catttaccga gcagcaaaac ttttgcaaaa aacgaccgct tgtaggcaag gctgccgtat
    14041 tgggattaaa aaaaacctac cgatgggcgg aggtgttggt ggtggatctt ctaatgctgc
    14101 aacagtatta gtcggtttaa atcacttgtg gaataccgag ctttcattgg aaaaattggc
    14161 agaattaggc ttaagtttag gggctgatgt gccgatattt gttagaggta tggctgcttt
    14221 tgccgaaggc gtgggggagg tgttaactcc ttgtgatcca caagaaaaat ggtatgtagt
    14281 gctaaaacca gaagtgtcga tttcaaccgc agcggtgttt accgacccga atttacctag
    14341 aaatacgcca aaacgcccct tagccgaatt attatcttta ccgtgggaaa acgattgcga
    14401 aaaagttgta cgagaaaagt attctgcggt tgaagatctt atacaagaat tgttacaata
    14461 tgctcagttt aggctaacag gcacaggtgc ttgtattttc gccgaatttg aaacaaaagc
    14521 agaagccgag caggtttttg cacataaacc ggaagccgtc ttcggttttg tggcgaaagg
    14581 gcaaaatatt tcgccattac atcaaatgtt attccaaatc taaccatctt aaccttaagg
    14641 atcaatccat gacagatatt aaactgtttg cgggcaacgc aactccggaa cttgctaatc
    14701 gtattgcaaa acatctttat acctcattag gtaatgcaac agttggtcgt tttagcgatg
    14761 gtgaaattca agtacaaatc aatgaaaatg tgcgtggagg cgatattttt attgtgcaat
    14821 ccacttgtgc accaactaat gataatttaa tggaattgat cgtgatggta gatgcgcttc
    14881 gccgtgcatc agctggtcgt attaccgcag tgattccgta tttcggttat gcacgccaag
    14941 acagacgcgt gcgttcggcc cgtgtgccaa ttaccgcaaa agtgattgct gatttcttat
    15001 ccagcgtagg ggtagataga gtcttaacct gcgacttaca cgcagagcaa attcaaggtt
    15061 tctttgatgt gccggtagat aacgtatttg gttcccctgt gttaatcgat gatattttga
    15121 aaaaatccga tttggtcaac cctatcgtgg tttctccaga tattggtggg gttgttcgtg
    15181 caagagcggt ggcaaaatta ttaaatgata ccgatatggc aattattgat aaacgtcgtc
    15241 caaaagcgaa tgtatcacag gtaatgcaca ttatcggtga tgtggctgat cgtgactgta
    15301 ttttagttga tgatatgatc gatactggtg gtactttagt caaagcggct gaagcgctga
    15361 aagaacgtgg cgcccgtcgt gtctttgctt atgccacaca cgcggtattt tcaggcacag
    15421 cagctcaaaa tttagcgaat cctgctttag atgaaattgt agtaactgat actattccac
    15481 tgagtaatga gattaaagca ttaaataaag tacgtgtttt aacattatcc ggtatgttag
    15541 cagaagcaat tcgccgtatt agcaatgaag aatccatttc agcaatgttt gatgcctaat
    15601 ttatgagaaa aaacccagtc gaaagattgg gtttttcata tctgttcact actatattta
    15661 gtttaagata atttgtatgt attccctgat tcgtaaatta ctttttgcac tagatacgga
    15721 aaaagcacat caattctcta ttcaggcact tgctttagcc ggaaaatcgc ctttttcgat
    15781 tctgccaaca cccgataatc cgacccaagt aatgggactc acgtttaaaa atccaatagg
    15841 gcttgcagcc ggagcggata aaaacggtga agcgatagat ggttttggga aattaggatt
    15901 tgggtttatt gaggttggga ctattactcc tctcgctcaa gacggaaacc ctaaaccgag
    15961 gcaatttcgt attgtagatg cagagggaat tattaaccgc aatggattta ataataaagg
    16021 cgttgatgtt ttagtagaaa atgtaaaaaa tgcaacctat agtggtattt taggtattaa
    16081 tattggaaaa aatgcggtta caccaattga gcatagcttt gatgactacc aaatttgttt
    16141 gcgtaaggtt taccaatatg ctgattatgt ggcggtgaat atttcatcac ccaataccaa
    16201 aaatttgcgc agtttacaat atggtgaggc attagatgat ttgctgcgaa acctcaaaaa
    16261 tgagcaggca caactttcgc aaaaaatggg gaaatatcga ccgcttgttt taaagattgc
    16321 gcctgattta accgatgaag aaatcgtttc tgtagccgat agtcttattc gttaccaaat
    16381 tgatggggtg attgccggca atactacctt gtctcgtgaa agtattgccg gattaccgta
    16441 ttcggaacaa ctgggtggat taagtggcaa gccattacac tcattaagta caaggttaat
    16501 ttcaaaatta tctgccgagt tgggcgagag aataccaatt ataggttgtg ggggagtcca
    16561 ttcgttagag agtgggcagg agaaagtgaa tgcaggtgct agtttattgc aagtctattc
    16621 cgcaatgatt taccaaggac catcattaat tcaaacctta gccaaacacc ttcagctgaa
    16681 cagttaggga tagatttcta gttaaaaatg attggttagg tttatttctg tcatcttagt
    16741 ggaatagatg gcggtattag ctatctatca aaaatagaca aaattgccta tttttgctat
    16801 ctt
//
LOCUS       DANLZQ010000049        16760 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.049, whole genome shotgun sequence.
ACCESSION   DANLZQ010000049 DANLZQ010000000
VERSION     DANLZQ010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16760)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16760)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16760
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.049"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(<1..362)
                     /locus_tag="PXE50_001392"
     CDS             complement(<1..362)
                     /locus_tag="PXE50_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HDL5622306.1"
                     /translation="MPFYAGQVKCIFIDPPYNTKSAFTHYDDNLEHSIWLSMMYPRLE
                     ILRELLAEDGSIWITLDDNESHYLKIMLDEIFGRKNFISNLIWEKKRKPSFLGKVGKV
                     TDNLFCYAKNKNELNELN"
     gene            complement(401..667)
                     /locus_tag="PXE50_001393"
     CDS             complement(401..667)
                     /locus_tag="PXE50_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methylase N-4/N-6"
                     /protein_id="HDL5622307.1"
                     /translation="MTTLTWYGKEEAVKKAKQTPYCLLRELPDFSHNIARQPTADSRQ
                     PTADSRQPTADSRQPTADSRQPTADSRQPTAQLLLKPYLKSSKI"
     gene            complement(808..3294)
                     /gene="torA"
                     /locus_tag="PXE50_001394"
     CDS             complement(808..3294)
                     /gene="torA"
                     /locus_tag="PXE50_001394"
                     /EC_number="1.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethylamine-N-oxide reductase TorA"
                     /protein_id="HDL5622308.1"
                     /translation="MKKQDNIDVSRRGFLKNSSLSLAAGAGLASGTTGVVGALASTSA
                     KAAEMKTVVTAAHWGPLGVVVENGKVVKSDSVFEISVPNELQHVVADQVHGETRVKYP
                     MVRKGYLEGNKDTTLRGRDEWVRVSWDKAFELVANEMKRVREAHGANAIFGGSYGWYS
                     SGALHASRTLLQRYLNVTGGFVGVKGDYSTGAAQVIMPHVLGTIEVYEQQTSWEVILE
                     SSDIVVLWSANPLNTLRIAWTSTDQQGIEYFKKLKESGKRIICIDPVKSESCEFLGAE
                     WVPVNTGTDVALMLGMAHTLVAEGKHDQAFLKKYTTGFEKFEEYLLGKTDNQPKDAKW
                     ASQICGVPEETIKKLATDFQSKRTMLMAGWGIQRQRHGEQGHWMLVTLAAMLGQIGLP
                     GGGFGLSYHYSNGGVPSATGGILGSITANPAVEAGAKTWLDETSKSSFPVARISDALL
                     NPGKTIDYNGTQITYPDIKIVYWAGGNPFTHHQDTNTLVKAWQKPDTIIVNECHWTPT
                     ARMSDIVLPATTSYERNDLTMSGDYSMMNIFPMKQVVEPQFEAKNDYDIFAELAKRAG
                     KEAEFTEGKSEMDWLQSFYQTAFEAARKNRVIMPKFEKFWQENKPLSFKASDKAKKWV
                     RYEEFRNDPLLNPLGTPSGKIEIFSEVIAKMNYDDCKGHPTWMEHEEYSGKTTAEEPL
                     ALVTPHSKWRLHSQLAYSSLRKQYAVNDREPVLIHTEDAAARGITSGDIVRIFNKRGQ
                     VLAGAVVTDGIIKGTLALHEGAWYDPLDLGTSEQPLCKNGNPNVLTRDEGTSKLAQGN
                     SPNTATVQVEKFTGQAPEVTVFKEPKYTQG"
     regulatory      complement(3313..3509)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01055"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="molybdenum cofactor riboswitch; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="molybdenum cofactor"
                     /db_xref="RFAM:RF01055"
     gene            complement(3513..4628)
                     /locus_tag="PXE50_001395"
     CDS             complement(3513..4628)
                     /locus_tag="PXE50_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NapC/NirT family cytochrome c"
                     /protein_id="HDL5622309.1"
                     /translation="MAKMKKIAVFVGIMALGAAVLGGTQYAMKATSSTEFCVSCHSMT
                     HPQAEWEGSVHFSNRKGIRAECSDCHLPQDGLHYVKAKIIALKDVWHTVVTNKLPDQE
                     AYEAHRLEMAQRVWAEMKENDSMTCKSCHSFDAMVLSEQTEAAQKMHKLAQETNQTCI
                     DCHKGIAHFMPDVPVDNAAAMGELAKHGAEFSTNDKTLYTLAMTPVQLAQGGEIRLLP
                     YAELHQWTAEGEQVKATVNGWQQEGAESVVYMDLGKRIMVALLPDDAQSKVNVTKTVF
                     DNVTNSNWKEINFEITAPKNAVTANITALNHFGDNLNQTHCSGCHAPIGAEHYTANQW
                     IGVVNSMKDRTSMSADDVRAVTIYLQRNAKDVAGSSH"
     gene            complement(4770..6521)
                     /locus_tag="PXE50_001396"
     CDS             complement(4770..6521)
                     /locus_tag="PXE50_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5622310.1"
                     /translation="MDKRSRWSCLVNEQGEISEWEDKAGADYFAELPQICHYAQALLY
                     SDKNSLQFYYSSNHQWLKISLERHQSFVLTQAEHTDLPYGLSKREIELLTLISSGLSN
                     EDIANELCISKRTVDKHIENIFAKTHTKSRTLLAVFAITEHLICLPTPGKLTQSILAS
                     FNIEQLALQIIAKKQPLVTASTRHEPPIFTINHHHSRPIIIGVPYVEQGIGQIDTREL
                     LNGTQLAVETINQQGGIHGREVQVATAGFYVKDKASILQAYHHLFDQEVDAISTAYAC
                     YLPEVHELIATKGIPYLHIATHSGSNKLAQNLPNQRIENMFQVCASDVTYGLGISHFL
                     QYYRYHYAPWLQNKTVMVVTVSWQKVDIGIESLTLSLREQGWNVDYLELTQEQDNYAT
                     LMAQVHNLAPSIIVFASYFAEDIVQFYQTFIRNPTNAIIYSIYAPSAFLPHEKLCEGV
                     LWSTNSGLSENYLGRQFSQHYERFFGKSPTYSQASIAYDQANILANAWKQSVSPRHFK
                     AVSNAIRLQPHYGVNGTYYFNTDSQIGLTYAETHDLSISLPQLVYQIQQGQSRVIAPE
                     LFANAQFILPPWFSEKA"
     regulatory      6685..6841
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01055"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="molybdenum cofactor riboswitch; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="molybdenum cofactor"
                     /db_xref="RFAM:RF01055"
     gene            6830..7855
                     /gene="moaA"
                     /locus_tag="PXE50_001397"
     CDS             6830..7855
                     /gene="moaA"
                     /locus_tag="PXE50_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HDL5622311.1"
                     /translation="MQSIIPIKNVGDDVVSGLVDRFQRQYTYLRLSITDVCNFRCNYC
                     LPDGYKPPSHKQTFLSVDEIQRVAKAFANLGTEKIRITGGEPTLRKDFLEIAHTISQT
                     PGIRKVALTTNGYRLERDVELWQQAGITDINVSVDSLDPRQFQLITGENKLQSILKGI
                     DKAFEIGYPKIKVNAVLMKQYTAPELDKFLTWIKDKPIQMRFIELMETGEMDSFFQAQ
                     HLSGQSVMTRLLQEGWQLQPKAMSDGPAKVLSHPDFKGEIGLIMPYEKNFCASCNRLR
                     VSALGKLHLCLFGEEGIDIRDLLASDEQQLQLETRLKSSLQGKREHHYLHIGDSGVRN
                     NLASIGG"
     gene            8356..8832
                     /gene="moaC"
                     /locus_tag="PXE50_001398"
     CDS             8356..8832
                     /gene="moaC"
                     /locus_tag="PXE50_001398"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HDL5622312.1"
                     /translation="MTTFTHINQNGEANMVDVSMKQETVRIARAEAFVRMNAETLQMI
                     VSGNHHKGDVFATARIAGIQAAKRTWELIPLCHPLLLSKVEVQLEALPESNQVRIESL
                     CKLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMIIENVRLLSKSGGKSGDFKVD"
     gene            8825..9070
                     /gene="moaD"
                     /locus_tag="PXE50_001399"
     CDS             8825..9070
                     /gene="moaD"
                     /locus_tag="PXE50_001399"
                     /EC_number="2.8.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005631889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin synthase sulfur carrier subunit"
                     /protein_id="HDL5622313.1"
                     /translation="MIKILFFAQVRELVATDRLDVEPTFTTAEALREHLSQQGKKWQL
                     ALEKGKLLVAINQTICPLETEIKDGDEVAFFPPVTGG"
     gene            9072..9527
                     /gene="moaE"
                     /locus_tag="PXE50_001400"
     CDS             9072..9527
                     /gene="moaE"
                     /locus_tag="PXE50_001400"
                     /EC_number="2.8.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin synthase catalytic subunit MoaE"
                     /protein_id="HDL5622314.1"
                     /translation="MFETLIEVQEAEFDQNRIYQWLSEQHSVGAATLFIGKVREMNLG
                     DNVSGLFLEHYPAMTKKALQEIVAQARTRWDLQRVAVIHRIGQLHTGDEIVLVGVSSA
                     HRGDAYHANEFIMDYLKTKAPFWKREQTQAGERWIEGRESDQQAAKKWQ"
     gene            9560..10042
                     /gene="ybeY"
                     /locus_tag="PXE50_001401"
     CDS             9560..10042
                     /gene="ybeY"
                     /locus_tag="PXE50_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HDL5622315.1"
                     /translation="MENLYIDLQIACENTENLPSEQQFYTWVQKALAVEAKTDDFPES
                     EITIRIVDEAESHELNLTYRGKDKPTNVLSFPFEAPEGIEMPLLGDLVICRQVMEKEA
                     EEQGISAESHWAHLAIHGTLHLLGYDHIEEDEAVEMESLETEIMQSLGYEDPYLSEKI
                     "
     gene            10120..12138
                     /locus_tag="PXE50_001402"
     CDS             10120..12138
                     /locus_tag="PXE50_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA(Met) cytidine acetyltransferase"
                     /protein_id="HDL5622316.1"
                     /translation="MRTIAIITSPNNADFIQQGYFYIPENHQLKAIPFSNAKTILGQE
                     YPFAIYTMQAENGVNFNLDAFAILAGTIQENGTLFLLCPQWDNLENELDFDALRWNEN
                     QAIACPNFYQHFKQLVAKFGFEVRTNLPKLPATSGQIPSKIYQLTQEQQNILQNLPLD
                     PADIHLITAPRGRGKSTLAGRLAKALPAQNKVLITARSYSALPSFWRSAEQKIPFFAP
                     DNLIEQVKSKNISPNQWLFIDEAASLPLPILHTLCAYFEKVVLTTTTQNYEGTGRGFE
                     LKFPVMLDKPFKHWTLSQPLRWSENDPLEAFVTELLLLSEEKSPLFSKEGKGEIYSLR
                     SHYVPLLKQRSNAKRLWQKQLSKNISYSNKHLQEKIAFYHLLANAHYKTTPTDLRRLF
                     DGENQLLFSQQENEQLIGGIWAMQEGGLDEKLTQAIWLGERRPQGSLVAQYLCFQGNL
                     PQACKLHSIRISRIAVLPEKQNQGVGKRLISQFILQNSVEKRPLDFISVSFGLTTPLH
                     AFWQSCGFQLVQITPNKEASSGYQSAMMIYPISEQGKLFAQQATQAFARDFALQPFFT
                     EICEELQNFEQFRPLATHNLDERDWKNLTAFAHGKRTFSAAYVSLKRLYLSDKARFSE
                     LDIFERKGQKISKMEVENYRKLVLQNLNNKSFKIIYRFYYIFLCFCSC"
     gene            12203..13393
                     /locus_tag="PXE50_001403"
     CDS             12203..13393
                     /locus_tag="PXE50_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000462687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HDL5622317.1"
                     /translation="MFSHIQAAPADSILGLGEAFKADSREGKINLGIGVYMTDEGKTP
                     IVKAVKEAEKRLLETENSKNYLTIDGVQAFNAATQALLFGEGAEVITSGRAKTAQSLG
                     GTGALRIAAEFIKRHTNAKNVWISTPTWPNHNGIFDAVGVNVKGYRYYNKETNGLDWE
                     NLIADLSQAEAGDVVLLHGCCHNPTGIDPTPAQWEQLAALSAEKGWLPLFDFAYQGFA
                     NGLEEDAYGLRAFVKNNRELLVASSFSKNFGLYNERVGAFTLIADNADDANRAFTQIK
                     SIIRVLYSNPSAHGASAVAVALADPDLKAQWIAELDEMRNRIKEMRSQLVQKLKEKGA
                     NKDFSFITEQNGMFSFSGLTPEQVDKLKDEFAIYAVRSGRINVAGITSKNIDALADAI
                     VKVL"
     gene            complement(13500..14801)
                     /gene="folC"
                     /locus_tag="PXE50_001404"
     CDS             complement(13500..14801)
                     /gene="folC"
                     /locus_tag="PXE50_001404"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HDL5622318.1"
                     /translation="MNTLSIPKATDSLETWLSYLEQAHSKPIDMGLDRIRKVATELDL
                     LKPAPYVITVAGTNGKGSTCRLLEVTLLKAGFRVGVYSSPHLIHYNERVRINGEVLPD
                     ADHVQAFAKINAKKTASLTYFEFSTLSAFELFKQNQLDIVILEVGLGGRLDATNIIDP
                     SLAVIISIDIDHVAFLGDNREDIGREKAGIFRENIPVVIGEPDCPHSIKQIADSLNCH
                     AFYRGKDWQFEIKNNLFHWYSEEKSFTDLPIPLIPIPNAGTALAVLMQLPFEIDEKII
                     RQALNEAQMTGRFQTLTDTDFTHFSQPKPAAKVIIDVGHNPHAARYLADKLRELKQPN
                     QKIYAVFSALEDKDLSGIVEPLANIIDEWHCAGLDCWRGQTGEAVLAKLVNVLPNSTA
                     CSYENVAQASRVLFETANENDIVLVFGSFHTVADFMLWLET"
     gene            complement(14811..15707)
                     /gene="accD"
                     /locus_tag="PXE50_001405"
     CDS             complement(14811..15707)
                     /gene="accD"
                     /locus_tag="PXE50_001405"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HDL5622319.1"
                     /translation="MSWLDRILGRDSSSSSNAKSKVPEGVWTKCTSCEQVLYSEELQR
                     NQQVCPKCDHHMRIDARTRLLNLLDKDSAVEIAADLEPEDVLKFKDLKKYKDRLTAAQ
                     KQTGEKDSFIVLAGTLHNMPVVTASFNFEFMGGSMGSVVGAKFVKAAEKALAEKIPFI
                     CFSASGGARMQEALFSLMQMAKTSAILAKMKEQGVPFISVLTDPTLGGVSASLAMLGD
                     VNIAEPKALIGFAGPRVIEQTVREKLPEGFQRAEFLLEHGAVDMIVHRKEMRDTLSRL
                     CAKLTNQPTPFKVAELVVENAE"
     gene            16016..16760
                     /gene="mazG"
                     /locus_tag="PXE50_001406"
                     /pseudo
     CDS             16016..16760
                     /gene="mazG"
                     /locus_tag="PXE50_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600778.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
BASE COUNT         4873 a         3519 c         3483 g         4885 t
ORIGIN      
        1 tcatttaatt catttaattc atttttgttt tttgcatagc aaaataaatt atctgtaact
       61 ttaccaactt tgcctaaaaa agatggtttc cttttctttt cccaaattaa gttagaaatg
      121 aaattcttcc gcccaaaaat ttcatcaagc ataattttca aatagtgact ttcgttatca
      181 tcaagagtga tccaaattga accatcttcg gcaagtaact ctcgcagaat ttcaaggcgt
      241 ggatacatca ttgaaagcca aatggaatgc tctaaattat catcgtagtg ggtaaaggcc
      301 gattttgtgt tatagggagg atcaataaaa atacatttga cttgccccgc ataaaagggc
      361 aaaagagatt ttaaggctga taaattatca ccctgaataa ttaaattttg cttgacttta
      421 gataaggttt cagcagaagc tgagctgtcg gctgtcggct gtcggctgtc ggctgtcggc
      481 tgtcggctgt cggctgtcgg ctgtcggctg tcggctgtcg gctgtcggct gtcggctgtc
      541 ggctgtcggc tgtcggctgt cgggcaatat tatgcgagaa gtccggcaac tcacgcaata
      601 ggcaatatgg ggtttgtttt gcttttttga cggcttcttc tttgccgtac caagtaaggg
      661 ttgtcataaa atgcacctga aaagtaaaag tggattattg taacaagcgg tcaaaaaaat
      721 agaaagtttt acaaaaaatt aagcaaattt aaccgcttgc aacatagaaa aggcacagtt
      781 ttatactgtg cctttggtta tatgaaatta gccttgtgtg tatttaggct ctttaaatac
      841 tgttacttct ggtgcttgtc cggtgaattt ttcaacctgt accgtagcgg tatttggtga
      901 gttaccctgt gctaattttg atgtgccttc atcacgggtt agcacgttag ggttgccgtt
      961 tttacatagc ggttgctcgc tggtgccgag atcgagcgga tcgtaccaag ctccttcgtg
     1021 caaggctaat gtacctttga taatgccatc tgtcaccacc gcaccggcta atacttgacc
     1081 acgtttgtta aaaatacgta caatatcacc gcttgtaatg ccacgagcgg cggcatcttc
     1141 agtatggatc aacaccggct cacggtcatt aaccgcatat tgtttgcgta atgatgagta
     1201 agctaactgg ctgtgtaaac gccatttaga gtgtggagtc accaatgcca acggttcttc
     1261 tgcggtggtt ttacccgagt attcttcgtg ttccatccaa gttgggtgac ctttacagtc
     1321 atcataattc attttggcaa tcacctcaga gaaaatctca attttgccgg acggtgtgcc
     1381 taatggattt aggagtgggt cattacgaaa ttcttcataa cgaacccatt ttttcgcttt
     1441 gtctgatgct ttaaaagaaa gtggtttatt ctcttgccag aatttctcga atttcggcat
     1501 aatcacacga tttttgcgtg ctgcctcaaa tgcagtttga tagaaacttt gtagccaatc
     1561 catttcagat ttgccttcgg taaattccgc ttctttgcct gcacgtttgg ctagttcggc
     1621 aaaaatatcg tagtcgtttt ttgcctcaaa ttgcggttcg accacctgtt tcatcgggaa
     1681 aatattcatc attgaataat cgcccgacat agttaagtca ttacgctcat agctggtggt
     1741 tgccggcagc acgatgtcag acatacgagc cgttggtgtc caatggcatt cattgacgat
     1801 aatagtatcc ggtttttgcc acgctttcac caaagtgttg gtgtcttggt ggtgggtaaa
     1861 cggattaccc cctgcccaat agacaatttt gatatcagga taagtaattt gtgtgccatt
     1921 gtaatcaatg gttttgcccg ggttgagcag tgcatcggaa atacgagcca ccgggaatga
     1981 agattttgat gtttcatcta accaggtttt cgctccggct tctactgccg gatttgctgt
     2041 gatagagcct aaaatgcccc ctgtggcact cggcacgccg ccgtttgagt aatggtagct
     2101 taaaccgaaa ccaccacccg gtaagccgat ttgacctaac attgcagcta gggtgactaa
     2161 catccaatgc ccttgttcac cgtgtcgttg gcgttgaatc ccccagcctg ccattaacat
     2221 tgtgcgttta gattggaaat cagtcgctaa ttttttaatg gtttcttccg gcacaccaca
     2281 aatttgactt gcccattttg catctttcgg ttgattgtct gttttaccga gcagatattc
     2341 ttcaaacttc tcaaaaccgg tggtgtattt tttaaggaat gcttgatcgt gtttgccttc
     2401 agcgactaag gtatgagcca taccgagcat taacgcaaca tcagtgccgg tgtttaccgg
     2461 tacccattct gcacctaaaa attcgcaaga ttcacttttt accgggtcaa tacagataat
     2521 gcgtttcccg ctctctttga gttttttgaa gtattcaata ccttgttgat cggtagaagt
     2581 ccacgcaatg cgtagcgtat ttaacgggtt agctgaccaa agcaccacaa tatctgaact
     2641 ttctaaaatc acttcccaac tagtttgctg ttcgtacacc tcgattgtac ccaagacgtg
     2701 tggcataatc acttgagcag caccggtaga atagtcgcct tttacaccaa caaatccgcc
     2761 ggtaacattt aaatagcgtt gtaacagtgt acgggaagcg tgtaatgccc cagaactata
     2821 ccaaccgtaa gaaccaccaa aaatagcatt cgccccgtga gcctcacgaa cacgtttcat
     2881 ttcattcgca actaattcaa atgccttatc ccacgaaact cgcacccatt catcacgccc
     2941 acgtagagta gtatctttat taccttctaa gtagccttta cgcaccattg ggtattttac
     3001 tcgtgtttca ccgtgtactt ggtctgctac cacgtgttgc aattcatttg gcacagaaat
     3061 ctcaaaaaca gaatcagatt tcaccacttt gccattttct accactacac ctaaaggccc
     3121 ccagtgggcg gcagttacta ctgttttcat ctcggctgct ttggcactgg tggaagctaa
     3181 tgcccccact acaccggtag taccactggc taaacctgca ccggcagcta agcttaatga
     3241 tgaatttttt agaaaaccgc gacgacttac gtcaatattg tcttgttttt tcataataaa
     3301 cctcgtttga agttaagtta aaaatagaca cctttctaaa gtcgagtgga taaaccattt
     3361 ctcgtgtatc cattggtaaa agcaccgacg gtaatttttg caaaatgtta ggaaaaaatg
     3421 accgcttgta gtaggtgctt tacggcttgc taccatatct ctgctctcag cagacactta
     3481 ggctcacaag ctcggtatcc tctaagttgc aattaatggg aactgcctgc tacatctttt
     3541 gcattacgtt ggagatagat agtcaccgca cgcacatcat cagccgacat agatgttctg
     3601 tctttcattg aatttaccac cccaatccat tgatttgcgg tgtaatgttc tgccccaatc
     3661 ggtgcatggc aaccgctaca gtgtgtttgg tttaagttat cgccaaaatg atttagtgca
     3721 gtaatattgg cagtgactgc atttttagga gcagtaattt caaaattgat ttctttccaa
     3781 tttgagttgg tgacattatc aaacactgtt tttgtgacat tcactttgct ttgagcgtca
     3841 tcaggtagaa gagcaaccat aatacgcttg cctaaatcca tatacaccac agattccgca
     3901 ccttcttgtt gccagccatt aaccgttgct ttaacctgct cgccttctgc tgtccattga
     3961 tgtaattctg cataaggtaa caagcgaatt tctccacctt gagcgagctg cactggagtc
     4021 attgcgagcg tataaagggt tttatcattt gtgctaaatt ccgcaccgtg tttagctaat
     4081 tcgcccattg ctgcggcatt atctaccggc acatcaggca taaaatgggc aattccttta
     4141 tggcaatcaa tacaggtttg attagtttct tgggctagtt tgtgcatttt ctgtgccgct
     4201 tctgtttgtt cagaaagtac catcgcatca aaactatgac agcttttaca ggtcatagaa
     4261 tcgttttctt tcatttctgc ccaaacacgt tgtgccattt ctagacgatg ggcttcatag
     4321 gcttcttgat caggtaattt attggttaca acggtgtgcc aaacatcttt taatgcgatg
     4381 attttagctt tgacataatg caagccgtct tgtggtagat ggcaatccga acactcggct
     4441 cgaattccct tacggttgga aaaatggaca ctgccttccc actctgcctg tgggtgagtc
     4501 atagaatggc agctcacaca aaattctgtt gagctggtgg ctttcattgc atattgtgtg
     4561 ccacctaata ccgcagcacc taatgccata ataccgacaa atacagcaat ttttttcatc
     4621 ttagccataa attaccccac ttaatacact aaaaattaaa gacagaggca ttgtattaac
     4681 tcccaagagg tataaaaata agtaaaaata cctattacct cgaaagagtg agaataattt
     4741 gatctaaggc aaaaatatgt agtgaaattt taggcttttt cagagaacca cggcggtaag
     4801 ataaattgtg cattggcaaa caactccggt gcaatcacac ggctctgccc ttgttggatt
     4861 tggtaaacca actgtggcaa gctgatagat aagtcgtggg tttctgcgta agttaatcca
     4921 atttggctat cggtattaaa atagtaagtg ccgtttaccc cataatgtgg ctgtaagcgg
     4981 atcgcattgg agacggcttt aaaatgccgt ggtgaaacac tctgtttcca cgcatttgcc
     5041 agaatattcg cttggtcata agcaatactg gcttgggaat aagtgggcga tttgccgaaa
     5101 aaccgttcgt aatgttggct aaactgtctg cctaaataat tttcgcttaa cccactattg
     5161 gtactccaaa gaacgccttc gcaaagtttc tcgtgtggca aaaacgccga aggtgcataa
     5221 atactgtaaa taatggcatt tgttgggttg cgaatgaacg tttgataaaa ctgtacaata
     5281 tcttctgcaa aataagaggc aaacacaata atggaaggtg cgagattatg cacctgtgcc
     5341 attaatgtgg cataattatc ttgctcttgg gtgagttcca gataatccac attccagcct
     5401 tgctcccgca aacttagggt taaactttca ataccgatat caactttttg ccaactcacc
     5461 gttaccacca tcaccgtttt attctgaagc caaggggcat aatggtaacg gtaatattgc
     5521 agaaagtgag atatacctaa gccataggtt acatcactgg cgcaaacctg aaacatattt
     5581 tcaattcgtt gattcggtaa attttgggca agtttatttg agccactatg ggttgcaata
     5641 tgcaaataag gaatgccttt agttgcaatt aattcgtgta cttccggcaa gtagcaggca
     5701 taagcggtgg aaatcgcatc aacttcttga tcaaataaat gatggtatgc ctgaagaata
     5761 cttgctttat ctttaacata aaacccagcc gttgcaacct gtacttctct gccgtgaata
     5821 ccaccttgtt gattgatggt ctcaaccgca agttgagtgc cgttaagtag ctctcgggta
     5881 tcgatttgcc caataccctg ttcaacataa ggcacgccaa taataatcgg acgactatga
     5941 tggtggttta tcgtaaaaat cggtggttcg tgtcgagttg aagccgttac aagcggttgt
     6001 tttttcgcga taatttgcaa tgccagttgt tcaatgttaa agctggcaag aatggattgg
     6061 gttagttttc ccggtgtggg taaacagatt aaatgttcgg taatggcaaa aacagctaat
     6121 aaggttcggc ttttggtatg tgttttcgca aaaatatttt cgatatgttt atcaacagtc
     6181 cgtttgctga tacaaagctc attggcgata tcctcattgc tcaaaccact gctaattaga
     6241 gtgagaagct caatctccct tttactcagt ccataaggca aatcggtatg ctctgcttga
     6301 gtcaatacaa acgattggtg gcgttctagg ctgatcttaa gccattgatg gtttgaacta
     6361 tagtaaaact gcaagctatt tttatctgaa tagagcaatg cctgtgcata gtggcaaatt
     6421 tgcggtaatt cagcaaaata gtctgcccct gctttgtctt cccattctga tatttcgcct
     6481 tgttcattta ctaaacaaga ccatcggcta cgtttatcca ttctcacctc gaactaaaaa
     6541 cgttagctaa aatagcaaaa ttatctcggc attaatatga tataaatcaa actaagcaac
     6601 ggttgccaga tttttatagg tagagcatac aatttaaatt atacctcttg cctaattagg
     6661 tttctcacca taaaatgaaa accaatttat tgaagactcc gagcattatt tcctaactct
     6721 aaaaattaaa gacaaatttt tgatatggaa tttatgccag taacagcata aagctgttca
     6781 aaggataact tagaaatggg ttgtcctctc gtgtttagaa aggtgtcaaa tgcagtctat
     6841 tatcccaatt aaaaacgtgg gtgatgatgt cgtttcaggt ttagttgatc gctttcagcg
     6901 tcaatatact tatttgcgac tatccattac tgatgtttgt aacttccgtt gtaattattg
     6961 cttgcctgat ggctataagc cgccttcaca taagcaaact tttcttagcg ttgatgaaat
     7021 ccagcgggtg gctaaagcct ttgccaattt agggacggaa aaaatccgta tcaccggtgg
     7081 tgagccaact ttacgcaaag atttcctcga aatcgctcac actatttcac aaacacccgg
     7141 tatccgtaaa gttgccctaa ccaccaacgg ctatcgccta gagcgtgatg ttgaactgtg
     7201 gcaacaagcc ggtattaccg atattaatgt gagtgttgat agccttgacc cacgccaatt
     7261 tcaactgatt accggcgaga acaagttgca atctatttta aagggtattg ataaagcctt
     7321 tgaaattggc tacccaaaaa ttaaagtcaa tgcggtgcta atgaagcaat ataccgcccc
     7381 tgaattggat aaattcctca cttggatcaa agacaagccg attcaaatgc ggtttattga
     7441 gctgatggaa accggtgaaa tggatagttt cttccaagct caacatcttt ctggtcaatc
     7501 ggtgatgacc cgcttattac aagaaggctg gcaattacaa cccaaagcga tgtctgacgg
     7561 cccggcaaaa gtgctttctc accctgattt taaaggcgaa atcggcttaa ttatgcccta
     7621 cgagaaaaat ttctgtgcct cttgcaaccg cttgcgtgtt tccgcacttg gtaaactgca
     7681 tctttgctta tttggtgaag aagggattga tattcgtgat ttactggcaa gcgatgagca
     7741 acagttacag cttgaaaccc gcctaaaatc ttccttacaa ggcaagcgag aacaccacta
     7801 tttgcatatt ggggatagtg gggttaggaa taatttggcg agtatcggtg gttaaacaac
     7861 caccgagcgt gttttttctg ttacttttct ttgcttcgcc aaagaaaagt aaccaaaaga
     7921 aaggcgaccc cagattttcc ttaatccttc gcttgttgct aacttttggg acgaactttt
     7981 caaactcgcc aactgcgttg gctcaaacac gaaaagttgt cctcaaaagt ttacgcaatc
     8041 gctacggcgg aaaatagggg caagcggtac attatttaag atttttgcaa gtttttattt
     8101 aaaaataacc gcttgtaatg ttccagcttc tcccttctga accgcctgag cgactttgaa
     8161 tttataggaa aaatttagtg tttgagccaa cgaagttggc gagttttaaa tttttccgtt
     8221 aaacaaattc aaataaaatg aagatagcgg tgaagtaggg tgtgctttct ttggttactt
     8281 tctttgcaca agcaaagaaa gtaacaagaa gacgctcaat attaatttta caatcaaatt
     8341 taaagagaca aacaaatgac aaccttcacc cacatcaacc aaaacggcga agccaatatg
     8401 gttgatgttt caatgaaaca agaaaccgta cgcattgccc gagcggaggc atttgtgcga
     8461 atgaatgccg aaacattaca aatgatcgtc agtggtaatc accacaaagg cgatgtattc
     8521 gcaaccgctc gaattgccgg tattcaggcg gcgaagagaa cttgggagct gattccactc
     8581 tgccacccgt tattgctttc taaagtggaa gttcaactgg aggcgttgcc ggaaagcaac
     8641 caagtgcgaa ttgaatcact ctgtaaacta accggcaaaa ccggcgtgga aatggaggca
     8701 ttaaccgcag ctagtgttgc tgctctgact atttacgata tgtgtaaagc cgtgcaaaaa
     8761 gatatgatta ttgaaaatgt aagattactt agtaaaagtg gcggaaaatc aggagatttc
     8821 aaggttgatt aagatacttt ttttcgccca agtgcgtgaa cttgtggcaa cggatagact
     8881 agatgttgag cctactttta ccactgccga agcgttgcgt gaacacttaa gccaacaggg
     8941 taaaaaatgg caacttgccc ttgaaaaagg caaactgctg gttgcaatta atcaaacgat
     9001 ctgcccgctt gaaacggaga tcaaagacgg cgatgaagtg gcattcttcc caccggtaac
     9061 cgggggctaa aatgtttgaa accctgattg aagtacaaga agctgaattt gaccaaaacc
     9121 gcatttacca atggctcagt gaacaacata gcgtgggggc agccactcta ttcatcggta
     9181 aagtacgtga aatgaatttg ggcgataatg tttccggttt gtttcttgaa cactatccgg
     9241 caatgactaa aaaagcattg caagaaattg tggctcaagc tcgcactcgt tgggatttac
     9301 aacgcgttgc ggtgattcac cgcattgggc aactgcatac cggtgatgaa atcgtattag
     9361 tcggtgtgag ttctgctcat cgaggtgatg cctaccacgc caacgagttt attatggatt
     9421 atctcaaaac caaagcccca ttttggaaac gagaacaaac ccaagccggt gaacgttgga
     9481 ttgaagggcg tgagagtgac caacaagccg ccaaaaaatg gcaatagaaa aaatggcaat
     9541 aatttgcaaa aggtaacgaa tggaaaattt atatattgat ttgcagatcg cctgcgaaaa
     9601 taccgaaaac ttaccaagtg aacaacaatt ttatacttgg gtacaaaaag ccctcgcagt
     9661 tgaggcaaaa accgatgatt tccctgagag tgagatcacc attcggattg tcgatgaagc
     9721 agaaagccac gagctaaatc tgacttatcg tggtaaagac aagccaacca atgtgctatc
     9781 tttcccgttt gaggcccccg aaggaatcga aatgccacta ttgggtgatt tagtcatctg
     9841 tcgtcaagta atggaaaaag aggcggaaga acaaggtatt tcagccgaat cccattgggc
     9901 tcatttggcg attcacggca cacttcatct gctcggctac gaccatattg aggaagatga
     9961 agcagtggaa atggaaagcc tcgaaaccga aattatgcaa agtttagggt atgaagatcc
    10021 gtatctttca gaaaaaatat agtcttgtag gggagggtcc tgtgccctcc agtactccat
    10081 tataatcgga caggcacagg agctgttcct acaagttata tgagaacgat cgcaatcata
    10141 acatctccta acaatgccga ctttattcaa caaggctatt tttacattcc cgaaaatcat
    10201 cagcttaaag ctatcccctt ttccaatgcc aaaacgattt taggacaaga ataccctttt
    10261 gccatttata ctatgcaagc agaaaatggg gtgaatttta acttagatgc ttttgcaata
    10321 cttgccggca ctattcaaga aaacggtact ttatttttgc tttgtcctca gtgggataat
    10381 ttggaaaatg aattagattt cgatgcgtta cgttggaacg aaaatcaggc tattgcctgc
    10441 ccgaatttct atcaacattt taaacaatta gtcgctaaat ttggttttga agtcagaact
    10501 aatttgccaa aattaccggc tacaagcggt caaattcctt caaaaattta ccaattaacg
    10561 caagaacagc aaaatatttt gcaaaatcta ccgcttgatc ctgccgatat tcatttgatt
    10621 accgcccctc gtgggcgggg caaatctacc cttgcagggc gacttgcaaa agcgttaccc
    10681 gcacaaaata aggtattaat taccgcacgg tcttattctg cattgcccag tttttggcgt
    10741 tcggcagagc aaaaaatccc ttttttcgca cctgacaatt taatcgagca agttaaaagt
    10801 aaaaacattt cacctaacca atggctcttt attgatgagg cagctagcct acccttgccg
    10861 atactccaca cactttgtgc ctattttgaa aaagtggttt taaccacaac aacccaaaat
    10921 tacgaaggca cggggcgagg atttgagctg aaattcccgg taatgttgga taaaccgttt
    10981 aaacattgga cgttatctca accattgcgg tggagcgaaa atgatcctct cgaagcattt
    11041 gtgactgagt tgctattact ttccgaagaa aaatctcccc tctttagcaa agaggggaag
    11101 ggggagattt attcgcttcg ctcacactat gtgccgttgc taaagcaacg ttcaaacgca
    11161 aagcgtttgt ggcagaagca attatcgaag aatataagtt attcgaataa gcatttacag
    11221 gaaaaaatcg ctttctacca cttactcgcc aacgcccatt acaaaaccac tccaactgac
    11281 ttacgccgtt tatttgatgg cgaaaatcag cttttgtttt cacaacagga aaacgagcaa
    11341 cttatcggcg gaatttgggc aatgcaagag ggtggtttag atgaaaaatt aacccaagcc
    11401 atttggctag gggaacgccg tccgcaaggc agtctagtgg ctcaatatct ctgttttcaa
    11461 gggaatttac cgcaggcttg caaattgcat tccattcgca tttctcggat tgcggtattg
    11521 cctgaaaagc aaaatcaagg cgttggcaag cggttgattt ctcagtttat tttgcaaaat
    11581 tcggtagaaa aacgaccgct tgattttatc tctgtgagct ttgggctaac tactccactc
    11641 cacgcatttt ggcaatcttg tggtttccaa cttgtgcaaa tcacaccgaa taaagaggca
    11701 agcagtggtt atcaaagtgc aatgatgatt tacccgattt cggagcaagg aaagttattt
    11761 gcacagcagg caacccaagc ctttgccaga gatttcgccc ttcagccatt tttcacggaa
    11821 atttgtgagg aattgcaaaa tttcgaacaa tttcgaccgc ttgccacaca caatttagat
    11881 gaacgtgatt ggaaaaattt aaccgcgttt gctcatggca agcggacgtt ttcagcggcg
    11941 tatgtgagtt taaaacggct ttatttatcg gataaagcac gcttttcaga gctggatatt
    12001 tttgaacgaa aagggcaaaa aatctccaaa atggaggtgg aaaattatcg aaaactcgtt
    12061 ttgcaaaact taaacaataa atcatttaaa ataatttata ggttttatta catttttttg
    12121 tgtttttgct cttgctaaat ctgcaattta atcgtataaa ttcactgttt atttttcatt
    12181 ttgatgagga actccaatgt caatgtttag tcacattcaa gctgctccgg cagactcaat
    12241 tttaggctta ggtgaagcgt ttaaagcaga tagccgtgaa ggtaaaatca accttggtat
    12301 cggtgtttat atgaccgatg aaggcaaaac cccgattgtc aaagcggtaa aagaagcaga
    12361 aaaacgttta ttagagacgg aaaacagtaa aaattattta accattgacg gtgttcaagc
    12421 attcaatgcg gcaacgcaag cgttattatt tggcgaaggg gctgaagtga ttacctcagg
    12481 tcgtgctaaa actgcacaga gtttaggtgg gacaggggca ttacgcattg cggcggaatt
    12541 tatcaaacgt catacgaatg cgaaaaatgt atggatttca accccgactt ggccaaacca
    12601 taacggcatt tttgatgcag taggcgtgaa tgtaaaaggc tatcgctact acaataaaga
    12661 gactaacggt ttagattggg aaaatttaat tgccgattta agccaagcgg aagccggaga
    12721 tgtggtgtta ttgcacggtt gctgccacaa cccgaccgga attgacccaa cacctgcaca
    12781 atgggaacag ttagcagcat tatctgccga aaaaggctgg ttgccgttat ttgactttgc
    12841 ttatcaaggc tttgcaaacg gtttagagga agatgcttac ggtttacgag cttttgtgaa
    12901 aaataaccgt gaattgttgg tcgcaagctc attctcgaaa aactttgggt tatataacga
    12961 gcgtgtcggt gcatttaccc taattgcaga taatgctgat gatgccaacc gtgctttcac
    13021 tcaaatcaaa tcgattattc gtgtacttta ctctaaccca tctgctcacg gtgcaagtgc
    13081 agtagcagtt gcattggctg atcctgacct taaagcacaa tggattgcgg aattagatga
    13141 aatgcgtaac cgtattaaag aaatgcgtag ccaattagtg cagaaattaa aagaaaaagg
    13201 ggcaaacaaa gacttctctt tcattactga gcaaaatggt atgttctcat tcagtggctt
    13261 aacaccggag caagtggata agttaaaaga tgagtttgca atttatgctg tgcgttcagg
    13321 cagaatcaat gtagcaggca ttaccagcaa aaacattgat gctcttgccg atgcgattgt
    13381 gaaagtgctt taattaaacc ttaaagatat atagaggcat aagcctgagt gcttgtgcct
    13441 cttttttatc ttttaggtac aagtgtggac acttgcacca acgttgatta ttcgtagaac
    13501 taggtttcca accaaagcat aaaatctgct accgtatgaa atgagccgaa caccagcaca
    13561 atatcatttt cgttggctgt ttcaaacaat actcggcttg cctgtgccac attttcatag
    13621 ctacaagcgg ttgaatttgg caaaacgttt accaatttcg ctaacaccgc ctcgcctgtt
    13681 tgtccacgcc aacaatctag ccctgcacaa tgccattcat caataatatt agctaatggc
    13741 tcgacaatac cggataaatc cttatcttct aacgcactaa acaccgcata gattttttga
    13801 tttggttgct ttaactcccg cagtttgtca gctaaataac gtgctgcgtg tgggttatgc
    13861 cctacatcaa taattacttt tgcagccggt ttaggttgag aaaaatgagt aaaatcggta
    13921 tccgtcaggg tttgaaaacg ccctgtcatt tgagcttcat ttaaggcttg tcgaataatc
    13981 ttttcatcaa tttcaaatgg cagttgcatt aatactgcta atgcggtgcc ggcgtttgga
    14041 atcggaataa gcgggattgg taaatcggta aaggattttt cttcagaata ccaatgaaac
    14101 agattattct taatttcaaa ctgccagtct ttaccccggt aaaaagcgtg acaatttaac
    14161 gaatcagcaa tctgtttaat cgaatgaggg caatcaggct cgccgatgac aaccggaata
    14221 ttttcacgga aaatgccggc tttctcacgc ccgatgtctt cacggttatc gcctaaaaat
    14281 gcaacgtggt cgatatcaat cgagataatc acggcaaggc ttggatcaat aatattagtg
    14341 gcatctaatc gcccacctaa tccgacttct aaaatcacaa tatcgagctg attttgtttg
    14401 aatagctcaa atgcagacag cgtactaaac tcaaaataag tgagtgaagc ggtctttttt
    14461 gcattaattt ttgcaaatgc ttggacgtgg tcggcatcag gtaatacttc gccgttaatt
    14521 cgcacccgtt cattatagtg aattaagtgc ggtgaagagt aaacaccaac ccgaaatccg
    14581 gcttttaata aggtaacttc taacaaacgg caggtcgaac ccttgccgtt agtaccggca
    14641 acggtaatca cataaggggc aggcttgagt aaatccagct ctgttgcgac cttacgaata
    14701 cgatctaagc ccatatcaat cggtttagaa tgggcttgtt ctaaatagga aagccacgtt
    14761 tccaaagaat ccgtggcttt aggtatgctt aatgtattca ttcagatatt ttattctgcg
    14821 ttttctacaa ccaattccgc cactttaaac ggcgttggtt gattggttaa ttttgcacaa
    14881 agacgggaaa gggtatcacg catctcttta cgatgcacga tcatatcaac tgccccgtgt
    14941 tctaataaga actcggcacg ttggaaacct tccggcagtt tttcacgtac ggtttgctca
    15001 attacacgag gaccagcaaa gccgattagg gcttttggct cagcaatatt cacatcgccc
    15061 agcattgcca aacttgcgga aaccccacct aaagttgggt cggttaatac agaaataaac
    15121 ggtacgccct gctctttcat tttggctaaa atcgcactgg tttttgccat ttgcattaaa
    15181 gagaataacg cctcttgcat acgagccccg cccgatgccg aaaaacagat aaacggaatt
    15241 ttttcagcta aagctttttc cgcagctttc acaaattttg cacctactac agaccccatt
    15301 gaaccgccca taaactcaaa gttaaaggag gccgtaacca ccggcatatt atgcaatgta
    15361 ccggcaagca cgataaaaga atctttctca ccggtttgtt tttgcgcggc agttaaacga
    15421 tctttatatt tctttaaatc tttaaatttc aacacatctt ccggctctaa gtcggcagcg
    15481 atttcgaccg cagaatcttt atctaacaaa ttcaataaac gggtgcgggc atcaatacgc
    15541 atatgatgat cgcattttgg acaaacctgt tggttgcgtt gtaattcttc gctatagaga
    15601 acttgttcac aacttgtgca ttttgtccat acaccttccg gcacttttga ttttgcattg
    15661 cttgatgatg aagagtctct acctaaaatt ctgtctaacc agctcattat tattcctttt
    15721 ggattgagtt gttgggttca ctaaatggtt gctattaaag cataatttat cggtttttga
    15781 tatgttttct tgacatatca gatcactaac tatgtgtata agttcgataa aaaaacgcaa
    15841 tcagaagaat gattaacatc accacaattt gaattaagcg ttttttggtt aatttttccg
    15901 ctgccattgc tctgctcata cttaataaat ttccgcatta taagcgaaaa agcacgggct
    15961 atgtagaatt tgcaaaattt tgatcaaaaa taaccgcttg taaaaaggaa atactatggc
    16021 aaccattgaa caatttcttg aggttgtaaa ccaacttcgt caccctgaac acggctgccc
    16081 gtgggatctc aaacagaatt ttgacacgat gttccccact tattggaaga aacctacgaa
    16141 gtagcggaag cgattcacac ccaagatcgc actgccttgc gtgaagagtt aggcgattta
    16201 ttactgcaag tggtattttt aagccaatta gcgaaagagg aaggcagttt cacttttgat
    16261 gatgtagtaa cggatattca cgataaactg atttaccgcc accctcacgt ttttggtgat
    16321 gtgaaagcta ctaacagcga agaggcctta caaagttggg aagcacaaaa agcgaatgat
    16381 gcaaaacacc gtagccaaga ttctattttt agatgattta ccttttgctt tgcctgctct
    16441 tacccgtgca aataagctac aaaaacggtg tgcaaaagtt ggattcgatt gggataaccc
    16501 tcacgatgtg ctggcaaaag tcgaagaaga actcgatgaa gtcaaagcag aaatcgcaca
    16561 atatccggct cgctccatcg agcttgctga agaattaggc gatctcttgt ttgcgattgt
    16621 aaatttatgc cgccattatc ataccgatgc cgaggaaatt ttacgcaatg caaatctaaa
    16681 atttgaacat cgctttcgaa aagttgaaaa atctgtgaaa aaatcgggaa gaactgtaaa
    16741 agaatgtaaa ttagaagaac
//
LOCUS       DANLZQ010000050        16601 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.050, whole genome shotgun sequence.
ACCESSION   DANLZQ010000050 DANLZQ010000000
VERSION     DANLZQ010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16601)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16601)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16601
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.050"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(<1..516)
                     /locus_tag="PXE50_001407"
     CDS             complement(<1..516)
                     /locus_tag="PXE50_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDL5622320.1"
                     /translation="MLDSLKEVNQKLDKKADKVGGGTKEDALVTLDTLIASGTVKAET
                     AMSLLPTLQKGAVATGASSEDMAKIAISSMQQFGIKEEDIGRALDMAVAAGQAGSFEL
                     AYMASWLPQQMAAAKQAGLSSIEGFERLLIANQQARVTAGTSDEAGNNLVNLLGKITA
                     KETNERFKNIEY"
     gene            615..866
                     /locus_tag="PXE50_001408"
     CDS             615..866
                     /locus_tag="PXE50_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5622321.1"
                     /translation="MAPTISDGDQMLVDFSKKEARGDDKIYLVQNGESVWVKRVRKVW
                     DYVELISDNESYRPIRITADEAQNLQIIGQVVHIGHSLV"
     gene            complement(1062..1262)
                     /locus_tag="PXE50_001409"
     CDS             complement(1062..1262)
                     /locus_tag="PXE50_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HDL5622322.1"
                     /translation="MQYVLDLTGYACPLPLLMAKKAMNDLKKGDSLEILLNQQSSLTD
                     FELLAKEQGWLCELQAVENVGY"
     gene            complement(1321..1833)
                     /locus_tag="PXE50_001410"
     CDS             complement(1321..1833)
                     /locus_tag="PXE50_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HDL5622323.1"
                     /translation="MQQLEPQTFASWAEPIDMLYACHSKVKSFCKQLQILPDYLEKNG
                     VNQAVKNDVQQILNYFNISAPLHHEDEEDDFFPELIKVQPQAQAEVDELERQHVHLHK
                     NWDYLSAQLEDLLAGKRENVDRDLIERFVAGYDVHIAIEEPLFELGREHLAQDKLSAM
                     GKVMADRRKL"
     gene            complement(1846..3000)
                     /gene="tgt"
                     /locus_tag="PXE50_001411"
     CDS             complement(1846..3000)
                     /gene="tgt"
                     /locus_tag="PXE50_001411"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HDL5622324.1"
                     /translation="MKYELKTTSGNARRGRLTFNRPKGEFHVETPAFMPVGTYGTVKG
                     MTPEEVKATGAQILLGNTFHLWLRPGQEVMKMHGDLHDFMQWHGPILTDSGGFQVFSL
                     GKLRKIKEEGVTFQNPISGEKIFLSPEKSMEIQYDLGSDIVMIFDECTPYPATFDYAK
                     KSMEMSLRWAKRSRDRFDELENPNALFGIIQGGIYEELRKVSVEKLVEIGFDGYAVGG
                     LAVGEPKEDMHRILEYVCPQIPADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNA
                     RNGHLFVTNGIVKIRNAKYRADTTPLDPECDCYTCKNYTKAYLYHLDKCGEILGARLN
                     TIHNLRYYQRLMAEIRQAIEEDRFDDFVVEFYARIGKEVPPLQSEVKEQK"
     gene            complement(3059..3199)
                     /locus_tag="PXE50_001412"
     CDS             complement(3059..3199)
                     /locus_tag="PXE50_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622325.1"
                     /translation="MKKLLLCVGILVLAACSSTGVGGSIGAGGGSNGVGIGLGVGTDF
                     RF"
     gene            3293..3865
                     /locus_tag="PXE50_001413"
     CDS             3293..3865
                     /locus_tag="PXE50_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1439 domain-containing protein"
                     /protein_id="HDL5622326.1"
                     /translation="MKILRKFAAVCVVSMAMLSANANLLTISEQEINDYLATKLAEKI
                     PLKDKVGIPKLFELDYRLHSLTSQIGRTEEKKVAISGVVDGLLNAKGKKYAASIHLNM
                     DTTPYYDPQKGALFLKDVRLLSWSATPAKYQAELQMFLPVLADGLSSFLNSTPVYTLD
                     ENKTKEAMVKKFGKAIVVENGNIKLETTIF"
     gene            3967..4185
                     /gene="cspD"
                     /locus_tag="PXE50_001414"
     CDS             3967..4185
                     /gene="cspD"
                     /locus_tag="PXE50_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein CspD"
                     /protein_id="HDL5622327.1"
                     /translation="MDIGIVKWFNNVKGFGFITSDVCEGDIFAHFSEIQAEGYRSLKV
                     GQKVQFELVQGERGASASNITPISEKTL"
     gene            4275..5189
                     /locus_tag="PXE50_001415"
     CDS             4275..5189
                     /locus_tag="PXE50_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL5622328.1"
                     /translation="MPSSYQLVLINLLYIFGIGLNIVLLRFLSLHFDPLNNNGIRFLV
                     GGFTLLFFILWRFRTSLSQLIKTPKLIAISLFVGLMMSANMYFWLKGVKITNAVTVSI
                     FGVLAMPFGVIIAAIFFQDERERIKSKAFWFGSILTIIGSLGFIWHGKTLSIGEGFIL
                     GSVFLFLSIIIRNIQNLVVKFARELNVLTLSCVTSLTTSLSSLLLSQQAGKFNELFTA
                     PNWLLFSLMVAGIYAIMIGMVLTFHIIQTQGLITYQVLELLMPVSTAIIAYILLDERI
                     SIVQMGFACIVILGSSIALKLVKYPKHY"
     gene            5308..6168
                     /gene="araC"
                     /locus_tag="PXE50_001416"
     CDS             5308..6168
                     /gene="araC"
                     /locus_tag="PXE50_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose operon transcriptional regulator AraC"
                     /protein_id="HDL5622329.1"
                     /translation="MYKNLSLLSPTYPFDLEFIAGLTQCEKGNYLDSIVDRQQGMHGY
                     MLQLTTFGRGSVFDGKHVFTAHRGQLLLFTPNAVQHYHRHPESQYWHYKWVYFQPNPK
                     WNKWLNWSDMEEKIGRITISDDRYFQEISQLFSKIELELKSSKFFKEDIATSLLEYLL
                     MKCISAEKIEVIPVIDQRILTVCDLILTNLAKNESLEAMAEKVFLSPSRLSHLFKQSL
                     GISLVQWRELQRISESKKLLYFSNISISNIAKSLGYEDSLYFSKIFKKHTGLSPSEFR
                     TLERRKDSEM"
     gene            6355..7329
                     /locus_tag="PXE50_001417"
     CDS             6355..7329
                     /locus_tag="PXE50_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDL5622330.1"
                     /translation="MKKPTFKHALFSSILALACYGSAFANDVVNISKIDGMPWFNRMA
                     EGVVQAGKDNNINAYQVGPSNTDAPQQVKLIEDLIAKKVSAISIVPNDANALEPVLKK
                     AKQNGIVVLTNESVGQPSADWDIEIIDNAQFAADYVEEVAKAMGGKGGYVIYVGGLTV
                     PQHNLWADLFVKYQKEHYPDMFEVTSRMPVAENINDARRTTIDLVKAHSDLKAVVSFG
                     SQGPIGAGLAVKEKRLKNKLNVFGMMIPSQAANLIKSGDITMGITYDPANAGYALAAV
                     AAKVLKGEKIEDGLEIPTVGKAKVDSEKKLLQFHNVLKVTKENIDKLY"
     gene            7384..8874
                     /locus_tag="PXE50_001418"
     CDS             7384..8874
                     /locus_tag="PXE50_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HDL5622331.1"
                     /translation="MAFISMRHISKTFHGIKALNQVNLSLDYGEALCLAGQNGCGKST
                     LIKILSGVYQPDKGAEIQIGATQYTKLTPQESIDKGIQVIYQDLALFPNLTVAENIAI
                     NLHRKFGWVSQDHIHQVALTAIQSINANLDLNAILEDLPIAQQQLVAICRALAQNARL
                     LIMDEPTASLTAKEVKDLLDVVIKLKSKGISIIFVSHKLQEVMSVSDSVLVLKDGNMV
                     GQYPIREMNEKRLGFLMTGLEIDYKRLDLPDFLQRKTVLEVRNLTLPHQYQEINFSLR
                     EGEIVALTGLLGSGRTELCLSLFGITQPQSGDILLNGEKVIFNTNRDAIAKGIAYVSE
                     DRMHTGLIMAESIHHNIISTIFHKITDKLQIIQSSKAYASSQALIDSLKIKVSDSDLP
                     VNTLSGGNAQRVSIAKWLAIDPKIIILDAPTIGVDIANKEGIFQIIKSLAQQGIAVIF
                     VTDEVEETYYNSHRVIVMKKGRIVDEILPAYSSEKSIAEVIYENQQ"
     gene            8858..9817
                     /locus_tag="PXE50_001419"
     CDS             8858..9817
                     /locus_tag="PXE50_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5622332.1"
                     /translation="MKISNNHILSSTLLILILLLTLFTRDFATIENLYDVVNNYAMLM
                     ILACGLFVVLLSGGIDISFPAITIISQYVMVTLIGKYDVGFAGVFVISSTIGILLGFI
                     NALFVNRLSVPSIIITISTLNIFYGGLLYFTKGVWLYEYPEWFTQEIVFFKQITAEGV
                     EFGLSFQALMAILAVILTGLITNKLTIGRKIYALGGNPDATSRIGFNLLFLHLFAYGY
                     MGFMAGLAGIVQSYTVQSVAPDSLLGYELTVLAAVVLGGASLSGGRGTLLGTVMGVML
                     LAIIQNGLNLMNVSSYWQTIITGIIIILSISATALSQRKKQGA"
     gene            9820..10770
                     /locus_tag="PXE50_001420"
     CDS             9820..10770
                     /locus_tag="PXE50_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5622333.1"
                     /translation="MKSKLDPTIFYLLALFAVAVIAFSIFIPDIFWSVSNFQSMASQI
                     PVLGILTLAMALPMLTGGINLSIIAGMNACSLIIAYFITQYTGISWLFIAILLSLCCA
                     LAIGLLNGTLIAIIRVSPILATLGTMTLINGINILVTNGSTIANFPETMLSINASAFL
                     WIPLPILIFLFLAGLIWFFLEKTAMGKAVYFIGNNEKATYYSGINTKKVLIWVYVISS
                     ILCVFAAILMMSKLNSAKASYGDSYLLISILAAVLGGINPDGGKGKLLGIMLALVLLQ
                     VIESGLNMLGISSYITMILWGSLLLFFIFLQKNRLFRLTQ"
     gene            10783..12378
                     /locus_tag="PXE50_001421"
     CDS             10783..12378
                     /locus_tag="PXE50_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY-family carbohydrate kinase"
                     /protein_id="HDL5622334.1"
                     /translation="MQNEKQLIEQGNTVIGIELGSTRIKAVLISSDGTILATGGADWE
                     NRLIDGIWTYHQNEIWEKLQAAYMDLSKTVKEKYHTTIRTAKALGISAMMHGYLPFDK
                     HGNPLVAFRTWRNNITLTSSEKLTALFQYPIPQRWSIAHLHQALLNQEPHLPEIDYLT
                     TLSGYVHWQLTDHKVLGIGDASGMFPIDTELKSYNPTMLAQFDRAIADYRMPWKLEAI
                     LPQVRVAGEQAGKLTEKGAKLLDPTDNLQAGIPLCPPEGDAGTGMIATNCIKEKTGNI
                     SAGTSAFAMIVLEKALSKAYSELDIVTTPAGKLVAMAHANNCTSDINAWVNLFGECLS
                     VFGVNICTEELYEMLFLHALQGDADCGGLLSYGFHSGEHNVGLSEGCPVFLHPTNAHF
                     NLANFMRTHLYTAFGAMKLGMDILINQEKVEISRILGHGGIFKTEGVAQKILSSALNI
                     PLATASTASNGGAWGIALLADFLSVSDRYSLEEYLDNCIFNTTKLNLVQPDKTMSEGY
                     ERFMQRYKQGIPVVEKALFLNTD"
     gene            12608..13810
                     /gene="yedE"
                     /locus_tag="PXE50_001422"
                     /pseudo
     CDS             12608..13810
                     /gene="yedE"
                     /locus_tag="PXE50_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005824242.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="selenium metabolism membrane protein YedE/FdhT"
     gene            13846..14115
                     /gene="yedF"
                     /locus_tag="PXE50_001423"
     CDS             13846..14115
                     /gene="yedF"
                     /locus_tag="PXE50_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007241376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HDL5622335.1"
                     /translation="MAFTVVQKLDKDPKDITPDYTLDTLGEPCPYPAITMLETMPQLQ
                     KGEILELLSDCSQSINNIPIDTKNHGYTLLSVEQNGTKLRYLIQR"
     gene            14215..14559
                     /locus_tag="PXE50_001424"
     CDS             14215..14559
                     /locus_tag="PXE50_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HDL5622336.1"
                     /translation="MNKYALLAIFWFIIGIYALLFRESTNDIPPFPHFDKVSHFALFF
                     IQIWLSANAFIRSKKGIPYFGLIIFALLYAFTSEWAQATFTSTREGSWLDGLADMLGA
                     SLSLLLVKYCKK"
     gene            complement(14622..15569)
                     /locus_tag="PXE50_001425"
     CDS             complement(14622..15569)
                     /locus_tag="PXE50_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HDL5622337.1"
                     /translation="MNRITQILNIKHPIVQAPMSWLTDAHLVASVAEAGGLGFLAPHA
                     GQTTNPTSNEEVLDRMRNEIRKVKALTDKPFGVPFILSYDFSLIPLMVDLFIEERVPV
                     VLDNGWLDPEIYAKFKAAGIKIICRLPNPNLADALKAQALGADILVLTGFDEGGTLPM
                     KEVGSFNVLAEFVGKVDLPIMLAGGIADKKAVQAALTLGAEGVWIGTAFIATEECRAS
                     EKVKNWIVEANANDLLLFRTEPHYYRSLPTGLAKKCFEMSENGATRSEIAKVMNAGTG
                     MRLGMLEGDFDNGYVSVGNGISQINKIKSVKELIDELMA"
     gene            15752..>16601
                     /locus_tag="PXE50_001426"
     CDS             15752..>16601
                     /locus_tag="PXE50_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622338.1"
                     /translation="MSIRWENIKPLQGSQNSAFEELVCQLARQEFKSQGKFTRISAPD
                     GGIEAMCELPDGSVCGWQAKYFLSSFSSSQWQQIEDSFKESLKNYPKLTKYYVCVATD
                     RANANVSGKKSFLTKWEEYTQRWKDFAQSQGREIEFEFWGSFELSDLLSKPENAGKKF
                     FWFNESELSDKWFEQYNQQAINNLGVRYTPEINVDLPIAMQLESLARTQIFKKHLSDE
                     FHKLLVEIKSQYKSLYRYEALENHFEPVYELLIDKLNLLNINNLETTIDIHLITKKIN
                     TLIEYFQ"
BASE COUNT         4899 a         3336 c         3202 g         5164 t
ORIGIN      
        1 atattcaata tttttaaaac gctcatttgt ttctttagct gtaatcttac caagcagatt
       61 taccagatta ttacctgcct catcgcttgt accggcagtg acacgagcct gttggtttgc
      121 aattaaaagt cgctcaaagc cctcaatact actcaaaccg gcttgttttg cagctgccat
      181 ttgttgaggc aaccaacttg ccatatatgc aagctcaaaa ctacctgctt gcccggctgc
      241 aacagccata tccaatgccc gcccaatatc ctcttctttg atgccaaatt gttgcataga
      301 ggagatcgca atttttgcca tatcctccga gcttgcccct gttgccaccg cccctttctg
      361 caaagtaggt aatagactca ttgcggtttc ggctttgact gtaccggagg caatgagcgt
      421 atcaagcgta actaacgcat cctcttttgt gccaccccca accttatccg cctttttatc
      481 aagtttttgg tttacttctt tgagcgagtc taaaatatcg tccagctttt ccttaagagc
      541 cttattcaga cagcctatta agcctaggcg taaaagccca taattgtggc gtattttggg
      601 ctaatggcac atcaatggcc ccgactatca gcgatggtga tcaaatgtta gtggatttca
      661 gcaaaaaaga agcccgtgga gacgataaga tttatcttgt gcaaaatggt gaaagcgttt
      721 gggtaaaacg tgtaagaaaa gtgtgggact acgttgaatt gattagcgat aatgagtcct
      781 accgcccaat ccgaattaca gcagacgaag ctcaaaactt acaaatcatc gggcaggtag
      841 tccacatcgg acactcttta gtttaaaaca gatttaaaat agttttaaaa ccgatcaaac
      901 ctatgcaaaa aatatcgcaa aaactgccca tttttttcta atcctgctca ttttgttttt
      961 tgcatagccc caaccaaaca ataacggcga acccttgtat tcacggggct cgccgttatt
     1021 tttccgccca aatttttttc tttctctcta tgcaaaaaag atcagtaccc cacattttca
     1081 accgcttgta gctcacaaag ccaaccttgc tctttggcaa gcagttcaaa atcggtaagg
     1141 ctactctgct gattgagtaa aatttccaag ctatcgccct ttttaagatc gttcatcgct
     1201 ttttttgcca ttaataacgg caaggggcag gcatagccgg ttaaatctaa aacatattgc
     1261 atagcgaaat agggaataaa gaaaaagggc gaatattgaa attcgcccaa tcacaaaaga
     1321 ttagagttta cggcggtctg ccatcacttt gcccatagcc gataatttgt cttgagctaa
     1381 atgctctcgc ccaagctcaa agagtggctc ttcaatcgca atatgcacat cataacctgc
     1441 cacaaaacgc tcaattaagt ctctatccac attttcacgt ttacctgcga gcagatcttc
     1501 aagctgtgcc gacaaatagt cccaattttt atgtaaatga acgtgctggc gttccagttc
     1561 gtctacctct gcttgagctt gtggttgcac cttaataagc tcagggaaga aatcatcttc
     1621 ttcatcttcg tgatgtaaag gggcagaaat gttgaagtag ttcaaaatct gctgcacgtc
     1681 attcttcact gcttggttta ccccgttttt ctcaaggtaa tccggcaaaa tttgcaactg
     1741 tttacagaaa ctttttactt tgctgtggca agcataaagc atatcaatcg gctctgccca
     1801 gcttgcaaag gtttgtggtt caagttgttg catatacact ccttgttatt tctgttcttt
     1861 tacttcagat tgtaaaggtg gcacttcttt gccaattcgg gcataaaatt ccactacaaa
     1921 atcatcaaaa cgatcttctt cgatggcctg gcgaatttct gccattaggc gttgatagta
     1981 gcgtaaatta tgaatggtgt ttagtcttgc ccctaaaatc tcgccacatt tgtctaagtg
     2041 atataaatag gctttggtgt agtttttgca agtgtaacaa tcacattcag gatcaagcgg
     2101 tgtggtgtct gcacgatatt tcgcattacg aatttttaca atgccgttgg tcacaaataa
     2161 atgtccgtta cgggcattgc gggttggcat tacgcagtca aacatatcaa taccacggcg
     2221 aaccccttcg actaaatctt ctggcttgcc tacacccatt aaatagcgtg gtttatctgc
     2281 cggaatttgc gggcaaacgt attctaaaat gcggtgcata tcttctttag gttcacctac
     2341 cgccaagcca ccgactgcat agccatcaaa gccgatttca actaattttt ccaccgagac
     2401 tttgcgaagt tcttcataaa taccaccttg aataatgcca aataacgcat tcgggttttc
     2461 aagttcatca aagcgatcac gagaacgttt cgcccaacgt agtgacattt ccatcgattt
     2521 ttttgcataa tcaaaggttg ccggataagg agtacattca tcaaaaatca ttacaatgtc
     2581 tgatccaaga tcgtattgga tctccattga tttttccggc gaaaggaaaa ttttctcacc
     2641 gctaatcggg ttttggaaag ttacgccttc ttctttaatt ttacgcagtt tacctaagct
     2701 aaaaacttgg aaaccgccgg agtcggttaa aatagggccg tgccattgca taaaatcgtg
     2761 caagtcaccg tgcatcttca tcacttcttg ccccggtctt aaccataaat ggaaagtgtt
     2821 gcctaataaa atttgcgccc ctgtcgcttt aacttcttca ggagtcattc cttttaccgt
     2881 gccataagtg ccaacaggca taaatgccgg tgtttcaacg tgaaattcgc ctttcgggcg
     2941 gttaaaagtt aaacgcccac gacgagcgtt accacttgtt gtttttaatt cgtacttcat
     3001 tttaatccac aaataaacag ttcgtgaaag cggtcaaaaa ccaccaaaaa tttaccaatt
     3061 agaatcgaaa gtcggtgccg acccctaagc cgattccaac gccgttagag ccaccaccgg
     3121 ctccaatact gccacccaca ccggttgatg agcaagcagc taacactaaa atgccaacgc
     3181 ataataagag ttttttcatt ttttgctgtc ctaaacgaaa aagagagtct atgatagacc
     3241 caatgtattc taacctgttt aatggattaa acctaatttt aaagggtaaa ttatgaaaat
     3301 tttacgtaaa ttcgctgctg tatgcgttgt ctcaatggct atgctctctg ctaacgctaa
     3361 tttgctcact attagcgagc aggaaatcaa cgactattta gccaccaaat tagctgaaaa
     3421 aattccttta aaagataaag tcggtattcc taaattattt gaattggatt atcgcctgca
     3481 ttcacttacc agccaaattg gcagaaccga ggaaaaaaaa gtagctattt ctggcgttgt
     3541 tgatggactt ttaaacgcaa aaggcaagaa atatgctgcc tctatccatt taaatatgga
     3601 taccacgcct tattatgatc cacaaaaagg ggcattattt cttaaagatg tcagattgtt
     3661 aagttggtct gcaacaccgg ctaaatatca agcagagctg caaatgtttt tgccggtgtt
     3721 ggctgatgga ttaagtagtt ttttaaacag tacgcctgtt tatactttag atgaaaataa
     3781 aacaaaagaa gcaatggtga aaaagttcgg caaagccatt gtagtagaaa atggtaatat
     3841 caagctagaa accactattt tttaaataat tttgtgatct tcgtctaatt tttacacttt
     3901 gatagttgag cttttacgcg ttttatttac aatccaaata tcgccattca ttatttggag
     3961 agttctatgg atatcggtat tgttaaatgg tttaacaatg taaaaggatt tggttttatt
     4021 acatcggatg tatgtgaagg agacattttt gctcattttt ctgaaattca agcagaaggt
     4081 tatcgctctt taaaagtcgg ccaaaaagta cagtttgaat tagttcaagg agagcgaggt
     4141 gcctcagcct caaatatcac gcctataagc gaaaaaacgt tataatccgt cgttaataaa
     4201 attattgtta taaccatact ttattagatt ttaaagctca gcttttacag ctgagccatt
     4261 tttgcttttt gaatatgcct tcctcttatc aattagtctt aattaaccta ctttatatct
     4321 tcggtattgg tctaaatatt gtactgctta ggtttctcag tttgcatttt gacccattaa
     4381 ataataacgg tatacgtttt cttgttggtg ggttcacctt attatttttc attttatgga
     4441 gattccgcac atcgctgtct cagctgatta aaactccaaa attgattgcg atttctctat
     4501 ttgtcgggtt aatgatgtcc gcaaatatgt atttttggct aaaaggggtc aaaattacaa
     4561 atgctgttac cgtctctatt tttggggtat tagctatgcc atttggtgtg attattgccg
     4621 ccatattctt tcaagatgaa agagaacgca ttaaaagcaa agctttctgg ttcggctcaa
     4681 ttttaacgat catcggttca ctcggattta tttggcacgg gaaaacactc tcgattggcg
     4741 aaggatttat tcttggttct gtgttcttat ttttgtcgat cattatccgt aatatacaaa
     4801 acctagttgt aaaatttgct cgagaactga acgtattaac cctaagttgt gtaacatctt
     4861 taactacttc actctcgagt ctattactta gccaacaagc aggtaaattt aatgagcttt
     4921 ttactgcacc aaactggcta ctattctctc tgatggttgc tggtatttat gcgattatga
     4981 tcggaatggt attaaccttt cacattatcc aaacccaagg actgataacc taccaagtat
     5041 tggaactatt aatgccggtt tcaacagcca tcattgctta tattttactg gacgaacgta
     5101 tttccattgt tcaaatgggc tttgcttgta ttgtgatttt aggctcaagt atcgccttaa
     5161 agttagtaaa atatcctaag cactattagg atctttgcta attaatattg gtaaaattac
     5221 atttggttta ctaatctgag cgttcattca ttagtaatga taaacaagcg gttatttttt
     5281 gttatttttt ggtaaatact gatagtcatg tataaaaacc tttctttgct ttcaccgact
     5341 tatccatttg accttgaatt catcgccggt cttactcaat gtgagaaagg taactatctt
     5401 gattctattg tcgataggca acaaggaatg cacggttata tgcttcaatt aaccactttt
     5461 ggtcgtggtt ctgtttttga tggtaagcac gtttttaccg ctcatcgagg gcagttactc
     5521 ctctttacac ccaatgccgt tcaacactac caccgtcacc cggaaagcca atattggcac
     5581 tacaaatggg tctattttca gccgaatcct aaatggaata aatggctgaa ttggtcagat
     5641 atggaagaaa aaataggacg tatcaccatt agcgatgatc gttactttca ggaaattagc
     5701 caacttttca gtaaaattga attagaactt aaatccagta aattttttaa agaagatatt
     5761 gcaacaagtt tgttggaata cttacttatg aaatgtattt ccgccgagaa aattgaggtt
     5821 attcctgtca ttgatcaacg cattttgaca gtttgtgatt taatcttaac gaatttggct
     5881 aaaaatgaga gcttagaagc aatggcagaa aaagtatttt tatcgccatc tcgcctctca
     5941 catcttttca agcaatcgct ggggatcagc ttagtgcaat ggcgggaatt acaacgcatt
     6001 tccgaatcca aaaaattgct ttatttctct aacatctcta tctctaatat tgcgaaatcc
     6061 ttaggctatg aggattctct ctacttttcc aaaattttca aaaagcatac cgggctgtca
     6121 ccctctgagt ttagaacctt agaacggcgt aaagacagtg aaatgtgatc ttgatctcac
     6181 tttactttgc atagcagaat tttccatatc gataacaaaa agttacctgt ttttctctca
     6241 ttcaaaagca taagatacaa acagctttaa tagtgctgtt tctattagag aagggatatc
     6301 aagctctgtg agtgatattc agtgaaataa cttcttatgt atgagggaag aacaatgaaa
     6361 aaaccaacgt tcaagcacgc attattttca agtattttag ctttagcctg ttacggctcg
     6421 gcatttgcca atgatgttgt taatatctcc aaaattgacg gtatgccgtg gtttaatcgt
     6481 atggcagagg gtgttgtgca agcaggcaaa gataacaata tcaatgctta tcaagttggt
     6541 ccatcaaata ccgatgcacc acaacaagta aagttaattg aagatttaat tgcgaaaaaa
     6601 gttagtgcta tttccatcgt ccctaacgat gcaaatgcct tagaaccggt actgaaaaaa
     6661 gcgaaacaga acggtattgt ggtattaacc aatgagtcag tcggacaacc tagtgccgat
     6721 tgggatattg aaattatcga taatgcacaa tttgcagcag actatgtaga agaagtagca
     6781 aaagctatgg gcggaaaagg cggctatgtg atttatgttg gtggtttaac cgtgcctcaa
     6841 cataatctgt gggctgattt attcgtgaaa taccagaaag agcattatcc ggatatgttt
     6901 gaagtgacca gcagaatgcc tgttgccgaa aatattaatg atgcacgccg taccaccatt
     6961 gatttagtga aagcccattc cgatcttaaa gcggtcgttt cttttggttc acaaggtcct
     7021 attggtgcag ggttggcagt gaaagaaaaa cgcttaaaaa ataaattaaa tgtcttcgga
     7081 atgatgattc cttcccaagc agccaattta attaaaagcg gtgatattac aatgggaatt
     7141 acctatgacc cggccaatgc aggttatgct ttagctgctg tcgctgccaa agtattaaaa
     7201 ggcgaaaaaa ttgaggatgg attagagatc ccaacggtcg gtaaagccaa agtagatagt
     7261 gagaaaaaac tacttcaatt ccacaatgtg ctgaaagtca ccaaggaaaa tatcgataaa
     7321 ttatattaat ttgcttgaaa tatgggctga tagccagccc atattttccc tcaggaggca
     7381 cttatggcat ttatttcgat gcggcatatc agtaaaacat tccacggcat aaaagcatta
     7441 aatcaagtca atctctcatt agattatggc gaagcacttt gtcttgccgg tcaaaatggc
     7501 tgtggaaaat caaccttgat caaaattctt tccggcgttt atcaaccgga taaaggggct
     7561 gaaattcaaa ttggtgcaac ccaatatacc aagctgacac cacaggaatc gattgataaa
     7621 ggtattcaag tgatttatca agatttagcc ctcttcccca atttaaccgt ggcagaaaat
     7681 attgccatta acctgcaccg aaaatttggc tgggtgagtc aagatcacat tcatcaggtt
     7741 gccctcactg ctattcaaag cattaatgca aatctagacc tgaatgcaat attagaagat
     7801 ttaccgatcg ctcaacaaca gttagtcgct atttgtcgag cgttagcaca aaatgccaga
     7861 ttattgatta tggacgagcc gactgcctca cttactgcaa aagaggtcaa agatctgtta
     7921 gatgtcgtca tcaaacttaa aagcaaaggc attagcatca tctttgtcag tcataaattg
     7981 caagaagtaa tgagtgtttc cgatagcgta ttagtgctga aagatggcaa tatggttggg
     8041 caatatccta tccgtgaaat gaatgaaaaa cgccttggtt tcctaatgac tgggctggaa
     8101 atcgattaca agcggttaga tttgccggat tttttgcaaa gaaaaaccgt attggaagtc
     8161 cgcaatttaa cgctgcctca tcagtatcaa gagattaact tttcgctacg agaaggggaa
     8221 attgttgccc ttacaggatt gctcggttca gggcgtactg agctttgcct aagtttattc
     8281 ggcattactc aaccacaatc cggcgatatt ttattaaacg gtgaaaaagt gatatttaac
     8341 actaaccgtg atgccattgc caaagggatt gcttatgtat cggaagatag aatgcacacc
     8401 gggctgatta tggcagagtc gattcatcac aatattattt cgactatttt tcacaaaatc
     8461 accgataaat tacagattat tcaatcctcg aaggcttatg caagtagcca agccttgatt
     8521 gattcattaa agattaaagt atccgattca gatttgcctg ttaataccct ttccggaggg
     8581 aacgcacagc gagtttcgat tgcaaaatgg ctggcaatcg accccaaaat tattatttta
     8641 gatgccccga ctattggggt cgatatcgcc aataaagaag ggatcttcca aattattaaa
     8701 tcattggctc agcaaggcat tgcagttatt tttgtgactg atgaagtgga agagacctac
     8761 tacaacagcc atcgggtaat tgtaatgaaa aaaggtcgca ttgttgatga aatcttgccg
     8821 gcatattcca gtgaaaaatc gattgcggag gttatttatg aaaatcagca ataatcatat
     8881 tctttccagt acgttactga ttttaatcct attattaacc ctatttactc gtgattttgc
     8941 aactattgag aacctttatg atgttgtaaa taattacgca atgttaatga ttttagcttg
     9001 tggtttattt gtggtattgc tgtctggcgg cattgatatt tctttccctg ctatcactat
     9061 tatttcccaa tatgttatgg tcactctgat cggtaaatat gatgtaggat ttgccggcgt
     9121 ttttgttatt tcttccacca tcggcatatt attaggtttt attaatgctc tatttgttaa
     9181 tcggcttagt gtcccttcca ttattattac gatctcaaca ctcaatattt tttatggcgg
     9241 actactctat tttaccaaag gtgtatggct ttatgagtat cccgaatggt ttacccaaga
     9301 aatcgtgttc tttaaacaga taactgctga gggagtggaa tttggattat cgtttcaagc
     9361 attaatggct attttggcgg tgatattaac cggcttaatt accaataaac tcactattgg
     9421 tcgaaaaatt tacgctcttg gtggtaatcc ggatgcaacc tcccgtattg ggtttaatct
     9481 cttatttctc catctatttg catacggtta tatgggcttt atggcaggct tggcaggcat
     9541 agtgcaatct tataccgtac aatctgtcgc accggattca ctactgggtt atgaattaac
     9601 cgtcctagct gccgttgtat taggtggtgc tagtttatca ggtggtagag gcaccctgct
     9661 tggtacagta atgggcgtaa tgttactggc gattattcaa aacgggctaa atttaatgaa
     9721 tgtatcgtct tactggcaaa ccattattac cggtatcatc attatcttaa gtattagtgc
     9781 aacagcctta agtcagcgga aaaaacaagg agcataacga tgaaaagtaa actggatcca
     9841 acgattttct atctcttagc actcttcgca gttgcagtta tcgcctttag tattttcatt
     9901 ccggatattt tttggtctgt cagtaacttt caatctatgg catcacaaat tccagtatta
     9961 ggtattttaa ccctagcaat ggcattaccg atgttaacag gtggaataaa tctttccatt
    10021 attgccggaa tgaatgcttg ctcattaatt attgcctact ttattacgca atataccggt
    10081 atttcttggt tatttattgc tattttatta agcctttgct gtgccttagc cattggatta
    10141 ctcaacggca cattaattgc cattattcgt gtttcaccaa ttttggcaac cttaggcaca
    10201 atgactttaa ttaacggcat taatattcta gtcactaacg gttcaaccat tgcgaacttt
    10261 ccggaaacaa tgttgagtat taatgcttca gcctttttat ggattccgct acccattcta
    10321 atctttctct ttcttgctgg gctgatttgg tttttcttag aaaaaactgc aatgggtaaa
    10381 gcggtttatt tcatcggcaa taatgaaaaa gccacctatt attcgggtat taataccaaa
    10441 aaagtgctga tttgggttta tgttatctcc tcaattcttt gtgtatttgc agctattttg
    10501 atgatgtcta aactcaattc tgcaaaagcc tcttatggtg attcctattt gttgatctcc
    10561 attttagccg cagtattggg cggtattaac cctgatggag gtaaagggaa actattaggg
    10621 attatgctcg ccttagtttt attacaagtg attgaaagtg gcttaaatat gctcggcatt
    10681 agcagttaca ttacaatgat tttatgggga agcttattgt tattctttat cttcctccaa
    10741 aaaaatcgcc ttttccgact aacacagtaa tggtggtaga ttatgcaaaa tgaaaaacaa
    10801 ctcattgaac aaggtaatac tgttattggt attgaattgg gctcaacccg aattaaagcg
    10861 gtgttaatta gctcagatgg gacgatttta gcaaccggtg gggcggattg ggaaaatcga
    10921 ctgattgacg gtatttggac ctatcatcaa aatgaaatat gggaaaaact acaagctgct
    10981 tatatggatt taagcaagac agtcaaagaa aaatatcaca caaccattcg cacagccaaa
    11041 gcattgggaa ttagtgcgat gatgcacggc tacttacctt tcgataaaca cggaaatccg
    11101 ctggttgcct ttagaacttg gcgaaacaac attaccctaa cctcatcgga aaaattgacc
    11161 gcactctttc aatacccaat tccgcaacgt tggagtattg ctcatttaca ccaagcattg
    11221 cttaaccaag agcctcactt gccggaaatt gattacctga caaccctctc aggttatgtg
    11281 cattggcaac tgaccgatca caaagtgtta gggattggcg atgcttccgg catgttcccg
    11341 atagatactg agttgaaatc ctacaatcca acaatgctgg ctcaatttga tcgagccatt
    11401 gccgactacc gtatgccttg gaaattggaa gcgattttgc cacaagttcg tgttgctggt
    11461 gaacaagcgg gcaaattaac cgaaaaaggt gcaaaattgt tagatccaac cgataatttg
    11521 caagctggca ttccactttg tccacctgag ggtgatgccg gaacaggtat gattgcaacc
    11581 aactgtatca aagaaaaaac cggtaatatt tctgccggca cctccgcatt tgcaatgatt
    11641 gtgttagaaa aagccctatc caaagcctat tcagagctgg atattgtgac gaccccggca
    11701 ggtaaattag tggcaatggc tcacgctaat aattgcacct ctgatattaa tgcgtgggtg
    11761 aatttattcg gcgaatgctt atcggttttt ggcgtaaata tctgcaccga agaactttat
    11821 gaaatgttat ttctccatgc cttgcaaggc gatgcagatt gtggagggct attatcctac
    11881 ggcttccact ccggtgaaca taatgtcggt ttatccgaag gctgtccggt tttcttgcat
    11941 ccaacgaatg cccattttaa cttagcaaac tttatgcgaa cccatctcta taccgctttt
    12001 ggtgcaatga aattaggaat ggacattctc attaaccaag aaaaagtgga aatttcccgt
    12061 attctcggtc acggtggtat atttaaaaca gaaggtgttg cacaaaaaat tctgtcttcc
    12121 gcactgaata ttccattggc taccgcaagt actgcttcaa atggcggagc ttggggaatt
    12181 gcattactgg cagactttct cagcgtatca gaccgttaca gtttagaaga atatttagat
    12241 aattgcattt tcaacaccac caaactcaat ctggttcaac cggataaaac aatgagtgaa
    12301 ggttatgaac gctttatgca acgttataag caaggcattc ctgtggtaga aaaagcgttg
    12361 tttttaaata cagattaaat aattataatt taagtatcac aagcggttat ttttgcaaaa
    12421 aacgaccgct tgttatttac atttgtacaa aaaataccta ctataaagac gcatttgtaa
    12481 aatgtgcatt gatatatcgc aagttttgtg tataggaaat gaactaatta ctgtgtcaat
    12541 cagtcccttt cttcatcgtt ataccctctt gcaaatccga ttaatctatc cttagttaag
    12601 gtgttttatg ttagcgattt ggcaaagttt taaacaaaat tatctaatca aatattggaa
    12661 tcctgttgca gcagtgatcg cagctggtat tatttcagct tattatttcg gcattactgg
    12721 cacttattgg gcggttacag gggaatttac ccgttggggc ggtcatctgt taaatgcttt
    12781 gggtgttgat gtttcgaact ggagctattt tcaactcatc ggcttagacg gcaccatctt
    12841 tacccgcatt gacggtgtga tgattctcgg tatgtttgcc ggctgtcttt ctgccgcatt
    12901 atgggcgaac aacgtcaaat ggcataatca gccacataaa aaacggatta tccaagcctt
    12961 gattggcggt gcgttagccg gtttcggagc ccgtttagca atgggctgta acctcgcctc
    13021 tctttttacc ggtattccgc aattctccgt ccacgcttgg tttttcacct ttgcgaccgc
    13081 catcggcact tactttgggg taaaagtgac tttattaccg atgtttagag tgaaattaga
    13141 gctgaaaaaa ggggcagcaa aaatcaaaga aaacgatccg aaacaagcta atcgccgttt
    13201 ttgggttggt atgctcattt ttatcactta tctttctgct tccctttatg taatgcaatc
    13261 ctcaatcaaa cttggttttg caatgctttg cggcttagcc tttggcttat tgattgaacg
    13321 agcccaaatt tgctttacct ccgctttccg tgacttatgg attaccggac gggcttatat
    13381 ggcaaaagca attattttcg gcattattgc cggcacaatc ggcgtgttct cttatattca
    13441 attaggtgtt tcacctaaaa ttttgtgggc tggcccaaat gccattatcg gcggattatt
    13501 attcggattt ggcattgtgc ttgccggcgg ctgtgaaacc ggctggatgt accgttcaat
    13561 ggaaggacag gttcatttta tgtgggtcgg cgtaggcaat gtagtcggtt caaccctgct
    13621 ggcttactac tgaggcgact tagctccggt gcttaccctt gattatgaaa aaatcaacct
    13681 actcaaagaa tttgggccgg ttggcggatt attcatcaat tatggcttat taattctttg
    13741 cttaatcgct gtagtttggt gggaaaaacg cttccttgcc aaagcgaaag caaaattagc
    13801 aactgcgtaa tctttttaac ttcaaccaac aagaggaaaa tgactatggc attcaccgtt
    13861 gtacaaaaac tagataaaga tccaaaagac atcacgcctg attacacctt agatacctta
    13921 ggcgaacctt gcccttaccc tgcgattacg atgttagaaa caatgccaca gctgcaaaaa
    13981 ggagagatat tggaactgtt aagcgattgt tcccaatcga ttaataatat tccgattgat
    14041 actaaaaatc acggctatac cctattaagc gtggaacaaa acggcactaa attacgctat
    14101 ttaattcagc gttaattgca aaaaattcgc acaaaacgac cgcttgtcgt aaaatagcaa
    14161 ctatttaaga gccttgtaac gcaaggctct tttattctaa gaggtaaaag aaaaatgaat
    14221 aaatacgctt tacttgcaat attttggttt attattggca tttatgcttt actttttcgt
    14281 gaaagcacta atgatatacc gccttttcca cattttgata aagtaagcca ttttgcctta
    14341 ttctttatcc agatctggtt atctgcaaac gcctttatcc gttcaaagaa agggatacct
    14401 tattttgggc taataatttt tgccttactc tatgctttca ccagcgaatg ggctcaggca
    14461 accttcacct caacccgaga aggttcttgg cttgatgggc tagcagatat gctaggagcc
    14521 tcactttcat tattgctggt aaaatattgc aaaaaataaa gcataaaaga ccgcttgtta
    14581 tatggtttag ccatactaca agcggtcatt ttttaccaaa attatgccat caactcatca
    14641 atcaattctt tcacactttt gattttgttg atttgtgaaa tgccattgcc caccgacaca
    14701 tagccattgt caaaatcccc ttctaacata cccaaacgca ttcctgtacc agcgttcatt
    14761 accttagcaa tctcactacg agttgcccca ttttcgctca tttcaaagca ttttttcgct
    14821 aatccagtcg gcagtgaacg gtagtaatgt ggttcggtac ggaataacag cagatcattg
    14881 gcatttgcct ccacaatcca gtttttcact ttttcgcttg cacggcattc ttcggtggcg
    14941 ataaatgccg tgccaatcca cacgccttca gccccaagcg ttaaggcagc ctgcaccgct
    15001 tttttatcgg caataccacc agccagcatt atcggcaaat ccaccttgcc cacaaattcc
    15061 gccagcacat taaaactgcc tacctctttc atcggcaaag taccgccctc atcaaaaccc
    15121 gtcagcacca aaatatctgc tcccaatgct tgggctttta aagcgtccgc caaattggga
    15181 ttaggcaaac ggcagatgat tttaatgcca gcagctttga atttggcgta aatctctggg
    15241 tcaagccagc cgttatccag caccacaggc acacgctctt caatgaataa atccaccatt
    15301 aacggaatca gcgaaaaatc ataagacaaa ataaatggta cgccaaaagg cttatcggtc
    15361 aatgccttaa ccttacgaat ctcgttacgc atacggtcaa gtacttcttc gttggaagtt
    15421 ggattggtgg tttgccctgc gtgtggggct aaaaaaccaa gcccaccagc ctcggcaacg
    15481 cttgctacca gatgagcgtc cgtcagccaa gacattggcg cttggacgat agggtgcttg
    15541 atatttaaga tttgggtaat gcggttcatt ggattttcct gtttgaataa aaagaattgg
    15601 acgtagttta atggttttgg atttgagagg gaatgcgtga aaatgggaag gtggttttcg
    15661 gatttggaaa attatcaatg ctaaaatact tgaaatacac acgccaatcc tcatatcaac
    15721 aaaattgaat atttaattat ggtaaaagaa aatgtctatt agatgggaaa acatcaagcc
    15781 cttacaaggt tctcaaaata gtgcttttga agagctagta tgccaattgg cacgccaaga
    15841 atttaaatct caaggaaaat ttactcgaat ttctgcacct gatggtggga ttgaagcaat
    15901 gtgtgaattg ccagatggtt ccgtatgtgg ttggcaagcc aaatattttt taagctcatt
    15961 ttcttcatca caatggcaac aaattgaaga ttcctttaaa gaatctttaa aaaactatcc
    16021 taaactaacc aaatactatg tttgtgtggc aaccgataga gcaaatgcca atgtatctgg
    16081 aaagaaatca tttcttacca aatgggagga gtatacccaa agatggaaag actttgctca
    16141 atcacaaggt cgtgaaatag aatttgaatt ttggggaagt tttgaattat ctgacttatt
    16201 atcaaaacct gaaaatgcag gcaaaaaatt cttttggttt aacgaaagcg aattatctga
    16261 caaatggttt gaacaataca atcaacaagc cattaataat cttggtgtgc gttatacacc
    16321 tgaaattaat gttgatttac ctattgcaat gcaattagaa agcttggcaa gaacccaaat
    16381 tttcaaaaaa catctgagtg atgaatttca taaattgtta gtagaaatta aatcacaata
    16441 caaatctctt tatcgttacg aagcgttgga aaatcatttt gaacctgtat atgaactttt
    16501 gattgacaaa cttaacttat taaatataaa taatttagaa acaacaattg atattcatct
    16561 aataactaaa aaaattaata cattaataga atactttcaa g
//
LOCUS       DANLZQ010000051        16211 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.051, whole genome shotgun sequence.
ACCESSION   DANLZQ010000051 DANLZQ010000000
VERSION     DANLZQ010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16211)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16211)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16211
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.051"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..576
                     /locus_tag="PXE50_001427"
     CDS             <1..576
                     /locus_tag="PXE50_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase large subunit"
                     /protein_id="HDL5622339.1"
                     /translation="GAYLEASEAQIFRGKYQEMEFVPNPDFDGPYYGLDFGFAQDPTA
                     AVKCWVFNGDLYIEFEAGKVGLELDDTADFIAKGVPQIADHVVRADSARPESISYLKR
                     HGLPRIIGVDKWKGSVEDGIEHIKSYGKVFIHPRCQQTLNEFRLYSYKTDRLSGDVLP
                     VVIDAHNHFIDALRYALTPLMQVKSAKGVLL"
     gene            573..1949
                     /locus_tag="PXE50_001428"
     CDS             573..1949
                     /locus_tag="PXE50_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1073 domain-containing protein"
                     /protein_id="HDL5622340.1"
                     /translation="MSLEQDRLAFLAEALGLGNIKRRTLWKEFGYPNTLTFNHFLKAY
                     KRNSIAFAAINRLLDGCWVDCPVIVEGEQKNESKQTTEWESKVERFMKRYWSAIKEAD
                     RRNLVGNYSALLLQVRDGQQWDQPILQGALSSIGEFGLVKLIPVWQSQLSVTEFQEDV
                     TADNYGEPLMYQFSESAFGKKSVSRNIKVHASRVILLNEGGDFNSPHSGVPLLEAGYN
                     KLVDLEKTSGGSAEGFLKNASRQLGIKLTKDVDLRQLEDSAKALGFSSFSDALNDKIK
                     KINSGTDSALITHEGDASVLSVAPADPKPTWEISANEFAASVQIPFTILFGQQTGRLA
                     SDEDKTDWANRCNGRRNGFLTDVITQLLNRLWFIGVLPMPKNSDVTVSWSDLLAPSEK
                     EKIANAQALASVATTSQSAFGFAAVTANEIRESLGFEPLPDNLIPPTIDDENEDQDEN
                     QATADSDK"
     gene            1903..2841
                     /locus_tag="PXE50_001429"
     CDS             1903..2841
                     /locus_tag="PXE50_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HDL5622341.1"
                     /translation="MKIKTKIKPLRIPTNKADPLNMGVSVAKLFRHIDVIYSQIKRSI
                     KQQILQKMSLRLQANNFEYFPSYLTATELADLLETLQKIIDKEILSNGSQGENLWFDS
                     YIDEAALKGTQSAVTDLGLQSEAYRSQRNLSSIVFSPAYFNRLAIAHMASYSEWQGLS
                     DELRKSLAGVITEAVLNGKNVKETAREIRQKLDVSSKRAKRIAQSSQLAAYRRAEWQE
                     AEEAKEELGLNTKLLHFSALKATTRLAHAQRHGKYFDVAEVREWYSRDGNQFNCYCKQ
                     SVVVVNADGKTDIEPLLVGLAKERKQWVGALKNVKK"
     gene            2828..4198
                     /locus_tag="PXE50_001430"
     CDS             2828..4198
                     /locus_tag="PXE50_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016533290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2213 domain-containing protein"
                     /protein_id="HDL5622342.1"
                     /translation="MSKNNVNIVTVINSKNISTESIDGDQHLIIRGVVPIVDDVVMND
                     GLYPADEINKSYNSLEGNFMPLGHPKIEGKYVSAQDVRAVNKHHVGAWAKNVRKESGK
                     VLVDMYINRRFAEGSEQGKTLLERLDGMVTNTNAEPIHVSTGLILNKVKQSGKSKGKK
                     YSWIATNMSFDHIAILLDVPGAATPDDGVGIFVNQDGSEMGVENVNLTQAADYRTEKL
                     FDKVRFYLMANSDLSFEEIHRALREAIRPEGKDKWSFWVEAVYPKYFIYSDDNSGKKY
                     KRSYFIDENDNVQLTSEPVEVVKKIGYEEITTNEEHNPMKTKILAVLNAANVKTEGLN
                     DDQLLEAYNKLQADKGKEPEKPKNEDDSEIDEKIKKAVNAAIEPLQQALQANTDKEQA
                     AMRAAVKAKFNMSDAAVNALQGEVLTELYAQTQQSVGLNNNSANGNGDNQWDGYSLNQ
                     EEKGNE"
     gene            4191..4625
                     /locus_tag="PXE50_001431"
     CDS             4191..4625
                     /locus_tag="PXE50_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622343.1"
                     /translation="MSNVIYRGSVKREPQTVNIVINDTSAPGAVVKLHNGKLEAAADL
                     KGRRFLLGNNRFKGQTIEQAYAKGDTATAFRLEPEQEYYAQIADGTYNFGDELTVKQA
                     GGKLTKAETGDVVLFFFDEESQRVISGGKGYADVVVANAYTK"
     gene            4640..5629
                     /locus_tag="PXE50_001432"
     CDS             4640..5629
                     /locus_tag="PXE50_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="encapsulin"
                     /protein_id="HDL5622344.1"
                     /translation="MLKFTKEQERFVINERINYDKKHALMAANSAGLLGNAMTLPKDV
                     WAEWDRDAVQIQREELVVFNDLAGISKSMPIGKLIHHFQTVSDSGSVNISLDGRSSAK
                     TDNVVLNYHGTPLPIIDSTFSFGWRDMSAAQSEGYQIDGAARANSLRKVAEKMEDLAL
                     NGDSSIVVGNAKLYGLRTAPNRMTNTHNLDLATATPKEIYDVFRDLISKFHAKNYYSP
                     VTLYVNYGDYFAMSTRDYSEQKSEGSILNKVMTIPQIAKIVPASRVPQNEILGLCKRS
                     DVYQVLNGMPLVTRPIARHNETDDYSFQIMAAVAVEFKFDDKGNAGYIQYTKS"
     gene            5641..5883
                     /locus_tag="PXE50_001433"
     CDS             5641..5883
                     /locus_tag="PXE50_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622345.1"
                     /translation="MKWLLTHDSHELKKGDVYEGETLPLWLVGKAIEIEEKSFEVATP
                     SDHADGETGETGETGETGETGETGETGQKGKKDKGK"
     gene            5886..6263
                     /locus_tag="PXE50_001434"
     CDS             5886..6263
                     /locus_tag="PXE50_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622346.1"
                     /translation="MAAEIELSEARTTLDELGFTSPNSLLELYVQQTNTLDQALNKSG
                     YSEETQKLIKLYLVAILAISSGARRIKSEGAPSGASRTFEYDPNALDNLKSAIRSIDP
                     KGCAESLLPKDKVVGFFDVVGGC"
     gene            6263..6607
                     /locus_tag="PXE50_001435"
     CDS             6263..6607
                     /locus_tag="PXE50_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622347.1"
                     /translation="MSNLSNWSYTAKATLWQAKGKNDDGVLVFSTPQIISCDYGADRK
                     RARFEIGREQAVKNVIWTEFAHAKLGDYVLIGESEQADPILAGAEEIIHIQRFADTFD
                     RNRDDFALITGG"
     gene            6609..6977
                     /locus_tag="PXE50_001436"
     CDS             6609..6977
                     /locus_tag="PXE50_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HDL5622348.1"
                     /translation="MGIKVKGIRQVKQRLNQVVGEVQSQKATRAMFRILNAVAPLAAH
                     YTPVDTSTLINSQFTEMEVNGTRLIGRVGYSANYAAYVHDPNIKQNFRKPSAKKEFLT
                     SALNESKATIKSIVKEELSL"
     gene            6974..7354
                     /locus_tag="PXE50_001437"
     CDS             6974..7354
                     /locus_tag="PXE50_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622349.1"
                     /translation="MISYVKAFKQWLEAHSLADGYVVQLYQWEDTQKAKPVIVIQPNS
                     GSPQVSDLSSEHYLLISLVAGKNSGYTIEERARAIMSKILVEPFASFGYIESMGGLPA
                     PIFTEDNRMIFRLPLRIISTNQEE"
     gene            7358..7840
                     /locus_tag="PXE50_001438"
     CDS             7358..7840
                     /locus_tag="PXE50_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5622350.1"
                     /translation="MGSPSPQNNAENLVVGRAVVLEYGTTDAKPQESEWKVAGAMTTK
                     SWDFSPNSVTSEADDAGGFPETLITNSDFSISGDGEWRKRPKSKELGIKDLVVLYANA
                     VKNRTQPYIWVRLKYAGLTILGKMVITALSSEAPTNDLVKFSIEFKVGDSSTIEIAAA
                     "
     gene            complement(7880..8296)
                     /locus_tag="PXE50_001439"
     CDS             complement(7880..8296)
                     /locus_tag="PXE50_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HDL5622351.1"
                     /translation="MFYPALFTPAEEGGFVVTFPDLPEAITQGDTFEEAMEMAEDVLL
                     SCVEIYFDEDRRFPLTRPVNTDEVPVFMPESIYAKVLLHNTMQEQAVSKAEIARLTNI
                     RPPEVQRILAPRHITKIDTIGRILASLGKPLQLSLG"
     gene            complement(8352..8528)
                     /locus_tag="PXE50_001440"
     CDS             complement(8352..8528)
                     /locus_tag="PXE50_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010848235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HDL5622352.1"
                     /translation="MKQSEFLRWLKANGVEVENGSKHLKLYYKGKRSHLPKHPSQELK
                     TGLVEGVKKQLGLK"
     gene            8624..9295
                     /locus_tag="PXE50_001441"
     CDS             8624..9295
                     /locus_tag="PXE50_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622353.1"
                     /translation="MKMVSYPITEIGEMLIATDGRDFLFRPSFKNIYKIGSPQEIVKI
                     YALLHGCEIREILPHILTKSESHQSYFWSVLNSPVFGRKILQNAMIVMSCCCDDDISL
                     LIGEWLPSKSGVRYKLGKMPPETIINFAKNLMGHGVIGCCELPKKEQSAKNEFSESFD
                     AVEYISLARTHFNMSREDAENLTMTELQQLLKSQMPAENNSYGQFTEEEYDRIMAEYE
                     KRRAA"
     gene            complement(9310..9543)
                     /locus_tag="PXE50_001442"
     CDS             complement(9310..9543)
                     /locus_tag="PXE50_001442"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622354.1"
                     /translation="MKKDCTKQDFANWLNENQEVCWIKEVSIERILSCVDDYVAICNA
                     RSKDEFELLNDIRELFYSAHYKDFTPVLSGRFF"
     gene            9712..10170
                     /locus_tag="PXE50_001443"
     CDS             9712..10170
                     /locus_tag="PXE50_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622355.1"
                     /translation="MKKMIVFVASVLSSFVIASDWEIIEAAQNKVKAELIRKSEKKAE
                     LCLNVAQAVLITNQKVQKDTFSMCGEFSTEIVFSDSKAYSLAVCGKVKGKDIIGNPIE
                     SDYIYQRATKDFYFNYNGKKSAYYDPQSDLARLQEVSDSMFNAMQNRYCK"
     gene            10238..10633
                     /locus_tag="PXE50_001444"
     CDS             10238..10633
                     /locus_tag="PXE50_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016533322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622356.1"
                     /translation="MDVKVINVLLIILFSAIVIGLFLFQESRLRDPNNHSVIYLEQIQ
                     EMCSLDKIGSYQIDFVRQSGNEYKESILVNDFELAIKTVLSTLRRAKIDSVSVISNTP
                     NLFIIHRAFYNARGSQEGKKLGSIRIAKI"
     gene            10720..13215
                     /locus_tag="PXE50_001445"
     CDS             10720..13215
                     /locus_tag="PXE50_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail length tape measure family protein"
                     /protein_id="HDL5622357.1"
                     /translation="MSQAVFYLNNFKELFMTVEVGGVVITADLEFENLLRDTQKVDKA
                     MDDIGKSTLKAEKGLKGLETQATKTAIAVNQATNKMKNIRGVAGQLGYQIQDISIMLQ
                     MGSNASTVIAQQGSQILSIFGPMGAVAGAILAISGAIGGALLPSLFDSTDATELLAAA
                     QKNLSEVVTQTESGVSALSAKIIKLAKVSEDAAKAKIAVAMSDAKIAIKAAGDSSQKA
                     FEQFDGFFGSFTNSSQSIRNAIDELKRYESKGKDVGAVIKELGGTYGGAIAEINALDS
                     VTSEMSKTLGITQSEALGLIKLLAQLEQDKSPDNIKLLAIALSDLSDKNGWANEELNK
                     LTRTINDNSVSALDAETSVRLLESAIKDLQNAIQNSQGALDGNVAKMNQLADAAERKA
                     ATIGKTERETAKYAATLLATTDEAKKNLDSTLSRIDASYDQIEAYQAEQKALQDKKTA
                     DAKAAREAEAAAKKSAQAKKQVVEQLRQMATQYEIAVLRQKGMHLEAVKLEAGMRLGA
                     AATKEQREEAEKLAQSIYGATAASQNFNAIQAQASPVTALDQRHQQQLAQIEEYKILY
                     PQKIMEAEAARAAIEEQYRQQRMEAQWEEWKQASDGARMFGDAVDAVGSSATSTITGL
                     LNGTMSVRDAFASIANTILNSVVQSLVEMGMAQVKQMIMGQTAAKASMAAQMVQAKAL
                     AASFAPAASMVSLATQGANAIPAQAAITSTMSMAQVAAVTGRKLGGPVSARQMYRVGE
                     NNQPEIFKASNGMQYMIPGQSGRVFSNKQSQGQGGGESKTVAVIVNQTNHFSSDEASA
                     NQAAVAKALSNQIKASVRLELQSQMRAGGVLAR"
     gene            13219..13548
                     /locus_tag="PXE50_001446"
     CDS             13219..13548
                     /locus_tag="PXE50_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5622358.1"
                     /translation="MQTFNFKVEQDYTVQNEPSVVILKFADGYEQTAPKGLNHNLKKY
                     QGITVKANKAEAVKIQQFLNAHGGYKKFNWRDRTSDETVTVRCRSWSSTKLGAVIEFT
                     LNFDEVI"
     gene            13570..14016
                     /locus_tag="PXE50_001447"
     CDS             13570..14016
                     /locus_tag="PXE50_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HDL5622359.1"
                     /translation="MASELIKLEQDALIELWEIDLTHIYSSSNPNQRGEIFRFHNGVS
                     QTQQNIWWQGNEYQAYPIAADGFEISGQGPSNRPTLTVSNLYGVVTVLVEDFGQPVEA
                     KVSSEETVDGNIQMTVELLKKMDQIADQRYRRNQLNDLRTGGTLSK"
     gene            14024..14740
                     /locus_tag="PXE50_001448"
     CDS             14024..14740
                     /locus_tag="PXE50_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HDL5622360.1"
                     /translation="MPISISNQMKLDLAKLEQNAMLDLYEVDLRKLQDKDGNAGGVYR
                     FYSGLNELKTSVVWQGRTYDPYPIEATGFERNSSGPSNRPTLTLSNLFGLVTGIANQF
                     DECIGAIVRRHQVYAQYLDAVNFAGGNAKADPNQEIISHFVIEQLTSLTRETATFTLA
                     LPIETDNAKIPSRIIMADTCTWIYRSAECGYTGKQYFDEKDKATSDPKADKCSHCLNG
                     CELRGNQRNFGGFVSVNKLG"
     gene            14744..15475
                     /locus_tag="PXE50_001449"
     CDS             14744..15475
                     /locus_tag="PXE50_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDL5622361.1"
                     /translation="MELEQQIIDYALQHEPHEMCGFVVFDGNKNRFIPCENQAEDKAN
                     YFEISDLDYIKAEEKGELVAVVHSHPEPNGKPVLSTLDRKMQVQTGLDWWLVHNRQIH
                     KFRNVPHLIGREFKHGTMDCYTLYRDAYMLAGYEMDEFERQDDWWHTGQNLYLDNIQG
                     QGFERVETPQIGDVILMQVGADVPNHAAIYIGEQMVIHHSPNRLSKRDLYDGYWLRHT
                     HSIWRHKLAEKLDFDGILNDIAVNN"
     gene            15744..>16211
                     /locus_tag="PXE50_001450"
     CDS             15744..>16211
                     /locus_tag="PXE50_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HDL5622362.1"
                     /translation="MITVKFYGHLRKFGTDFRLEVKDTAEAIRALCSQLTGLRETLRD
                     GIYKVRIGKQYLDASALEKGLFYCLKKGQTIHFTPVIKGAKSGGVFQAVLGVALIGAA
                     FFLGPVGWGVLGASSAMMMGAMGASMLLGGVAQMLTKMPNAPNIGNEKEKENST"
BASE COUNT         5027 a         3265 c         3796 g         4123 t
ORIGIN      
        1 ggtgcttatt tggaagcgag cgaagcgcaa atctttcgcg gtaaatatca agaaatggaa
       61 tttgtgccga accctgattt tgatggccca tattacggct tagattttgg tttcgcgcaa
      121 gatccgacgg cggcggtcaa atgctgggta tttaatggcg atctgtacat cgagtttgaa
      181 gcaggcaaag tgggcttaga acttgacgac accgcagact ttattgccaa aggcgtgcca
      241 caaattgccg atcacgttgt gcgtgcagat tcggcgcgtc ctgagtcaat tagttacctc
      301 aaacgtcacg gcttaccgcg cattatcggc gtggataagt ggaaaggctc ggttgaagat
      361 ggcattgagc atattaagtc ctacggcaaa gtctttattc acccacgctg tcagcaaacg
      421 ctcaacgaat ttcgccttta ttcgtacaaa accgaccgct tgtcgggcga tgtattgcct
      481 gtcgtgattg atgcccataa ccactttatt gatgcgctac gctacgcctt aacgccgttg
      541 atgcaagtta aaagtgccaa aggagtttta ctatgagcct agagcaagac agactggctt
      601 ttttagccga agccctaggg cttggcaata tcaaacgaag aacgttatgg aaggagtttg
      661 gctaccctaa taccttaaca ttcaaccatt tcttaaaagc ctataagcgc aatagtatcg
      721 cttttgcagc gattaaccgc ttacttgacg gttgttgggt tgactgcccc gtaatcgttg
      781 agggtgagca aaagaacgaa tcaaagcaga caaccgaatg ggagtccaaa gttgaacgtt
      841 ttatgaaacg ctactggtcg gcaatcaaag aggcagatag acgaaacctt gtcggtaact
      901 attcggcgtt attacttcaa gtaagagatg gtcaacaatg ggatcagcct attttgcaag
      961 gcgcgctatc tagcattgga gagttcggac tggttaaact gatccccgtg tggcagtcac
     1021 agctttcagt gacagagttt caagaggatg tgaccgccga taattacggc gaaccgctga
     1081 tgtatcaatt cagcgaatct gcctttggca aaaaaagcgt gtcacgaaat atcaaggttc
     1141 acgcaagtcg tgtaattttg ctcaatgagg gtggcgactt taattcccct cattctggag
     1201 ttcctctgct tgaggcgggt tacaacaagc tagttgatct cgaaaaaaca tcgggcggca
     1261 gcgccgaagg ttttctgaaa aacgcaagcc gacaattagg gatcaaatta acaaaagatg
     1321 ttgatttgag acagctcgaa gacagcgcaa aagcccttgg gttttcttca ttttctgatg
     1381 cgttgaacga caagatcaag aaaatcaact caggaacaga ctcagccttg attactcacg
     1441 aaggtgatgc ctctgtgttg tcagtcgcac cagcagatcc gaagccaacg tgggaaattt
     1501 ctgcaaatga gtttgccgcc tcagtacaaa tccctttcac gattttgttc ggacagcaaa
     1561 cagggcgatt ggcaagtgac gaggacaaaa ccgactgggc aaaccgttgc aacggtcgtc
     1621 gaaatggttt tctcaccgat gtgataacac aactacttaa tcgcttgtgg ttcatcggtg
     1681 tgctacctat gccaaaaaat agcgatgtca cagtgtcttg gtctgactta cttgcaccaa
     1741 gcgaaaaaga gaaaatcgca aacgcacagg ctttggcttc agttgcaact acatcgcagt
     1801 ctgcctttgg ttttgccgcg gtaacagcga acgaaatccg cgaatcttta gggtttgaac
     1861 ctctgcctga taatctgatt ccgccaacaa ttgacgacga aaatgaagat caagacgaaa
     1921 atcaagccac tgcggattcc gacaaataaa gccgatccgc tcaatatggg agtgtcggtt
     1981 gccaagctat ttcgtcacat tgatgtcatt tactcacaaa ttaagcgctc cattaagcaa
     2041 caaatcttgc aaaagatgtc actgcgactg caagcaaata attttgagta ttttccttcg
     2101 tatcttactg cgactgagtt ggcggatttg cttgaaacct tgcaaaagat tatcgacaaa
     2161 gagattttgt cgaatggttc tcaaggcgaa aatctctggt ttgactccta tatcgacgaa
     2221 gcagcactaa aaggcactca gtctgcggtc actgatttag gtctgcaatc agaggcttat
     2281 cgcagtcagc gaaacttatc atcaatcgtt ttcagtcctg cgtacttcaa tcgattggcg
     2341 attgcacaca tggcaagtta tagcgagtgg caaggtttaa gcgacgagtt gcgaaaatct
     2401 ttggcggggg tgatcacgga ggcggtttta aacggcaaaa acgtgaaaga aactgcccgt
     2461 gagattcggc aaaaacttga tgtgtcatca aaacgggcga agcgaatagc gcaatcaagc
     2521 cagttggcgg catatcgtcg ggcagaatgg caagaggcgg aagaggcaaa agaagaactt
     2581 gggctaaaca ccaagctctt acatttttca gcgctcaaag ctactacgcg attagcacac
     2641 gcccaacgcc acggcaaata cttcgatgtt gcagaggtgc gcgaatggta tagccgagac
     2701 ggcaaccaat tcaactgtta ctgcaagcag tctgtggttg tggtcaatgc cgacggtaaa
     2761 acagatattg agcctctcct tgttgggttg gctaaagaac gtaaacaatg ggtaggagca
     2821 ttaaaaaatg tcaaaaaata acgtgaacat cgtcaccgtc attaacagca aaaatatcag
     2881 cacagaatct attgacggag atcaacacct gattatccgc ggcgttgtgc cgattgttga
     2941 tgatgttgtg atgaacgacg gactttatcc tgcggatgaa atcaataaaa gctacaacag
     3001 cttagagggc aactttatgc cgcttgggca tccaaaaatc gaaggtaaat acgtttcagc
     3061 ccaagatgtt cgagcggtga acaaacatca cgtcggtgcg tgggcgaaga acgtacgcaa
     3121 ggaaagtggc aaagtgctgg tcgatatgta tatcaaccgc cgctttgcgg aaggttcaga
     3181 acagggcaaa accttgcttg aacgacttga cggaatggtg acaaacacca acgctgaacc
     3241 tattcacgtt tccacagggc tgattctaaa caaagtcaag caatcgggta aatccaaagg
     3301 caagaaatat agctggattg cgacaaatat gtcgttcgat catattgcaa tattgcttga
     3361 tgtgccgggc gcggcgacac ctgatgatgg cgtggggatt tttgtaaacc aagacggaag
     3421 cgaaatgggg gtggaaaatg taaacctaac acaagcggcg gattaccgca cagaaaagct
     3481 gtttgacaaa gtacgatttt acctgatggc gaactcagat ttatcgtttg aagaaattca
     3541 tcgcgcgctg cgtgaagcta ttcgccccga aggcaaagat aagtggtcat tttgggtcga
     3601 agctgtttac ccgaaatact tcatctattc ggacgataac agcggcaaga aatacaagcg
     3661 gagctatttt attgacgaaa atgacaatgt gcaactcact agcgaacctg tcgaagttgt
     3721 caagaagatt ggctacgaag aaattacaac caatgaggaa cataatccaa tgaaaaccaa
     3781 aatcttagcc gtgttgaatg cggcaaacgt gaaaacggaa ggcttaaatg acgatcagct
     3841 cttggaagcc tacaacaagc tgcaagcgga taagggtaaa gagcctgaaa agcctaaaaa
     3901 tgaagatgac agcgaaattg atgagaaaat caagaaagca gtcaatgccg cgattgagcc
     3961 actccagcaa gccttgcaag ctaatactga caaagagcaa gcagcaatgc gtgcggcggt
     4021 gaaagccaag ttcaatatga gcgatgccgc agtcaatgct ttgcaaggcg aggtattaac
     4081 tgagttgtat gcgcaaacgc aacaatcggt cggattaaac aataattcgg ccaacggcaa
     4141 cggcgacaat caatgggatg gttactcact caaccaagag gagaaaggca atgagtaatg
     4201 taatttatcg cggttcggtc aagcgtgaac ctcaaacggt gaatatcgtg atcaacgata
     4261 cttcggcacc gggtgcagta gttaaactcc acaacggcaa attagaggcg gcggctgatt
     4321 taaaaggtcg ccgtttttta ttgggcaaca accgctttaa ggggcagaca atcgaacaag
     4381 cgtatgcgaa gggcgatact gcaacggcgt ttcgtttaga gcctgaacag gagtattacg
     4441 cgcaaattgc cgacggcact tataactttg gcgatgaact cacggtaaaa caagcgggcg
     4501 gcaaactgac caaagcggag acgggcgatg tagtgctatt tttcttcgac gaagaatcgc
     4561 agcgtgtaat cagtggcggc aaaggctatg ccgatgtcgt ggtggcaaac gcctacacta
     4621 aataagaggt aacaaagcaa tgttgaaatt cacaaaagaa caagaacgct tcgtgattaa
     4681 cgagcggatc aattacgaca aaaaacacgc gctaatggca gcaaattcgg cggggttatt
     4741 gggcaacgcg atgactttgc cgaaagatgt ctgggcggaa tgggatcgtg atgcagtgca
     4801 aattcagcgc gaagaattgg tggtgtttaa cgatttagcg ggcatttcaa aatcaatgcc
     4861 gattggcaaa cttattcacc atttccaaac ggtatctgat agcggttcgg ttaatatctc
     4921 attagacggt cgttcatcag cgaaaaccga taacgtggtg cttaactacc acggtacacc
     4981 gttgccgatt attgattcca ctttctcttt tggctggcgc gatatgtcgg cagctcaaag
     5041 cgaagggtat cagatcgacg gtgcagcacg cgcgaacagt ctccgcaagg tggctgaaaa
     5101 aatggaagat ctcgctttaa atggtgattc ctctattgtg gttggcaatg ccaagcttta
     5161 cggcttgcgt actgcgccaa atcgtatgac taacacacac aatctggatt tagccactgc
     5221 gacaccgaaa gaaatttacg atgtgttccg tgacttgatt agcaaattcc acgcgaagaa
     5281 ctactactct cctgtaacgc tttatgtgaa ctatggcgac tatttcgcaa tgagtacacg
     5341 tgattactcc gagcagaaat ccgaaggatc tatcttgaac aaagtgatga cgattccgca
     5401 aattgcgaaa atcgtgccag caagccgtgt accgcaaaat gaaattctcg gcttgtgcaa
     5461 gcgttcggat gtgtaccaag tgcttaacgg tatgccgtta gtgactcgtc cgattgcgcg
     5521 ccataatgaa accgatgatt actcgttcca aattatggca gccgttgccg tggagttcaa
     5581 attcgacgat aaaggcaatg ctggctatat ccagtacact aaatcctaag gcggtgcaaa
     5641 atgaagtggc tattaacaca cgatagccac gagttgaaga aaggcgatgt ttacgaaggc
     5701 gaaacattac cgctttggct tgtgggcaaa gctatcgaaa tcgaagaaaa atcctttgaa
     5761 gttgcaacgc cttctgatca cgctgacggc gaaactggcg aaactggcga aactggcgaa
     5821 actggcgaaa ctggcgaaac tggcgaaact ggtcagaaag gcaaaaaaga taaaggcaaa
     5881 taactatggc agcagaaata gagctatccg aagcgcgaac aacgcttgac gaactgggtt
     5941 tcacttcgcc gaactctctg cttgagcttt acgttcagca aacgaacacc ttagaccagg
     6001 cgttgaacaa atcggggtac agtgaagaaa cacagaaact gatcaagctc tatctggttg
     6061 ctattcttgc aatttcatct ggggcgcgcc gtataaagtc agaaggtgcg cctagcggtg
     6121 caagccgaac gtttgagtat gatccaaacg cgctagacaa ccttaagtcg gcgattcgct
     6181 caattgatcc gaaaggttgc gctgaaagtt tgctacccaa agataaagtt gtcggctttt
     6241 tcgatgtggt cggaggctgc taatgtcaaa tttatcgaat tggtcctaca ccgcaaaagc
     6301 cacgctttgg caggctaaag gaaagaacga tgacggcgtt ttagtttttt ctacgccaca
     6361 aatcatttcc tgtgactacg gtgcagatag aaagcgcgca cgttttgaga ttgggcgtga
     6421 acaagcggtc aaaaatgtga tctggacgga gttcgcccac gccaaattag gcgattatgt
     6481 tctgattggc gaaagcgagc aagccgatcc gattttggct ggcgcagagg aaattattca
     6541 tatacagcgc tttgctgata cgttcgaccg caatcgtgat gattttgcgc tgataacagg
     6601 cgggtaaaat ggggatcaaa gtaaaaggca taagacaggt caagcagcgg ctgaatcagg
     6661 ttgttggcga ggttcagagc caaaaagcaa ctcgggcaat gtttcgcatt ttgaatgcgg
     6721 ttgcccctct tgcggcgcac tatacgcctg ttgatacctc aacgttgatc aacagtcaat
     6781 tcactgaaat ggaagtgaac ggcacacgct tgattggaag agtgggttat tctgctaatt
     6841 atgcggctta cgttcacgat cctaatatca agcaaaactt ccgcaagcct tcagcgaaga
     6901 aagagttttt gacttccgcg ctgaacgaat caaaggctac gatcaaatcc attgttaaag
     6961 aggagttgtc actatgattt cttatgtcaa agccttcaaa caatggttag aggctcactc
     7021 tcttgcagac ggctatgttg tgcagcttta ccagtgggag gatacgcaaa aagccaagcc
     7081 tgttattgtt attcagccaa atagtggttc gccgcaagtt tctgacctga gcagcgaaca
     7141 ctatctgcta attagccttg ttgcaggtaa aaattcaggt tacacaatcg aagagcgagc
     7201 aagggcgatt atgtcaaaga ttttagttga gcctttcgct tcctttggtt acatcgaatc
     7261 aatgggcgga ttacccgccc caattttcac cgaagataat cgaatgattt ttcgcttacc
     7321 acttcggatt atttcaacaa atcaagagga gtagtttatg ggttctccat ctccacaaaa
     7381 taacgcagaa aatctcgtgg tggggcgtgc cgtagtttta gagtacggta cgactgatgc
     7441 aaagccacaa gaaagcgaat ggaaggttgc gggcgcaatg acgacaaaga gttgggattt
     7501 tagcccaaat tcggttacat cagaggctga tgatgctggc ggcttccctg aaaccttaat
     7561 tacaaactca gactttagta tttctggtga cggtgagtgg cgcaaacgac caaaatcgaa
     7621 agaactaggc atcaaagatc tagttgtgtt atacgcaaat gcggtaaaaa atcgcaccca
     7681 accttacatt tgggttcgtt tgaaatacgc aggcttaaca attctcggaa aaatggttat
     7741 cactgcatta agtagcgaag ccccaaccaa tgacttagtg aaattctcta tagagttcaa
     7801 ggttggcgat tcaagcacta tcgaaattgc tgcagcgtaa aaaatcccac cctctataac
     7861 aagagcggtg ggattatcat tatcctaggg atagttgtag gggctttcct aagctagcca
     7921 aaatacgacc aatagtgtcg atttttgtaa tatggcgagg ggctaaaatt cgctgtactt
     7981 ctggcggacg gatattagtt aatcgggcaa tttctgcctt gcttaccgct tgttcttgca
     8041 ttgtattatg caaaagcact tttgcgtaga tgctctctgg cataaacaca ggcacttcgt
     8101 cggtatttac tgggcgagtg agcggaaagc gtctatcttc atcgaaataa atttcaacac
     8161 aagatagtag cacgtcttct gccatttcca ttgcttcttc aaatgtatcg ccttgggtga
     8221 tagcttctgg caaatcagga aatgtcacta caaagccccc ttcttcagcg ggggtaaata
     8281 acgctggata aaacatattt tctccttatt caagggtgta gtgaaagccc cttaacatca
     8341 ggggctttat attattttaa gcctagttgc tttttaaccc cttccactaa gcctgttttt
     8401 aactcttggc ttgggtgttt ggggaggtgg cttcttttgc ccttgtagta gagtttcaaa
     8461 tgctttgatc cattttcaac ctctacccca ttagccttta gccaccttag gaattcgctt
     8521 tgcttcacta cctcctccta tttgtttaac ttgggttcat tatatgcaaa aatgctaact
     8581 ttgtcaacag aaagttagca aaaatgctaa tttttttgtt gaggtgaaaa tggttagcta
     8641 tccaattact gaaattggtg aaatgcttat tgcaaccgat gggcgagact ttttattcag
     8701 accgagtttc aaaaatatct acaaaattgg aagcccacaa gaaattgtaa aaatctatgc
     8761 actattgcac ggctgtgaga ttcgagagat attgccgcac attttaacca aatcggagtc
     8821 tcatcaatct tacttttggt cagtgctgaa ttcgcctgtt tttggcagaa aaattctgca
     8881 aaacgcaatg atcgtgatgt cgtgctgttg cgatgatgat atttccctgt tgattggcga
     8941 gtggttgccg tcaaagtctg gcgttaggta caagttgggt aaaatgccac ctgagacaat
     9001 tatcaatttt gcaaaaaatt taatgggtca cggagtgatt ggttgctgcg aattgccaaa
     9061 gaaagaacaa tctgcaaaaa atgaattttc agaaagtttt gatgctgttg agtacataag
     9121 tttagcccga actcatttca atatgagccg cgaagacgct gaaaatctca cgatgaccga
     9181 attgcagcaa cttctaaaaa gtcaaatgcc tgccgaaaat aatagctatg gacagttcac
     9241 cgaagaagag tacgacagaa ttatggcgga atatgagaaa agaagagcgg cttaaatagc
     9301 cgctaacatt taaaagaacc tacctgatag aacgggagtg aaatccttgt aatgtgctga
     9361 ataaaaaagc tctcttatgt cattgagtag ctcaaattca tctttggatc ttgcgttgca
     9421 gattgccaca tagtcatcta cgcaggataa aatacgttca atactgactt cttttatcca
     9481 gcatacttct tggttttcat tcagccagtt ggcaaagtct tgtttagtgc agtctttttt
     9541 cataagttct cctttttgat tatttgcaaa aaaaatcata tcaaatcatc cgttgttatc
     9601 tattggcgaa aataattttt gcgacacaga tcgcaaaaat aggttttgac ggtggaaaaa
     9661 cgaatcttaa ttcgtagaat ggtaaaattt ctttattttt aaggtatttt tatgaaaaaa
     9721 atgattgttt ttgtagcttc tgttttgtca tcttttgtta ttgcatcgga ttgggaaata
     9781 atagaagcgg ctcaaaataa ggtgaaagca gagcttataa gaaaatcaga aaaaaaagca
     9841 gagttatgtt taaatgttgc tcaggctgtc ttaattacta atcaaaaagt gcaaaaagat
     9901 actttctcaa tgtgtggtga attttcgaca gagattgtct tttctgactc taaagcatat
     9961 agccttgcag tatgtggaaa ggttaaaggt aaagatatta tcggaaatcc gatagagagc
    10021 gactatatat accaaagagc aactaaggat ttttacttta attataatgg caaaaaatca
    10081 gcttattatg atcctcaatc tgatcttgca aggcttcaag aggtctcaga ctctatgttt
    10141 aatgctatgc aaaatagata ttgtaagtga tgcttgcatt ggtttttaaa tatttaactc
    10201 aaataattta tgtgttttta gtttaatagg gcgatttatg gatgtaaagg taattaacgt
    10261 cttactaatt attctttttt cagcaattgt aataggttta ttcctttttc aagaatcaag
    10321 attaagagat ccaaacaacc attcagtgat atatttagag cagattcaag aaatgtgcag
    10381 cttagataaa ataggctcat accagattga ttttgtacga caaagtggga atgagtacaa
    10441 agagagtatt cttgttaatg attttgagtt agcaataaaa accgtattat ccacgttaag
    10501 aagggcaaaa atagatagtg tgtcagtaat atctaacaca cctaatttat ttattatcca
    10561 ccgagctttc tacaacgcaa gaggtagtca agaaggaaag aaattaggat cgataaggat
    10621 tgcaaaaatt taatgtaaca aaaatataga ttaaattgta tttaaccaat ctattgctag
    10681 ataaattgta aaaaaatcac agaaataacc gcttgtgcta tgtcacaagc ggttttttat
    10741 ttaaataatt ttaaggaatt gtttatgacg gtcgaagttg gcggagttgt aattaccgca
    10801 gatctagaat ttgaaaatct gctaagagat actcaaaaag ttgataaagc gatggatgac
    10861 atcggaaaat caacattaaa agcagaaaaa gggctgaaag ggctagaaac gcaggcaacc
    10921 aaaacggcga tagcagtaaa tcaagccaca aacaaaatga aaaatatccg tggagtagca
    10981 ggtcaacttg gttatcaaat tcaagacatc tcaataatgc ttcaaatggg ttctaacgct
    11041 tcaaccgtta ttgctcagca agggtcgcaa atcttaagta ttttcggtcc aatgggagct
    11101 gttgcagggg cgatcttagc tattagtggt gctattggtg gggcgttact ccctagtttg
    11161 tttgattcaa ctgatgcaac tgagcttttg gcagcagctc aaaaaaatct cagcgaagta
    11221 gttactcaaa cggaaagtgg tgtttccgcc ctttctgcga aaatcattaa attagcaaaa
    11281 gtaagcgaag atgcagcaaa agcaaaaatt gcagtagcta tgagtgatgc aaaaatagct
    11341 attaaggcag caggggattc atcacaaaag gcatttgagc aatttgacgg cttttttgga
    11401 tcgtttacaa attcaagtca aagtattcgg aacgcaattg acgaattaaa acgctatgaa
    11461 tcaaaaggta aagatgttgg tgccgtaata aaagaacttg gaggcacata tggtggtgca
    11521 attgccgaaa ttaatgcgct ggattctgtg acaagcgaaa tgtctaaaac gcttggtatt
    11581 actcaatctg aggctcttgg tttgataaaa ctgttggctc aattagagca agacaaaagc
    11641 cctgataata ttaaattact cgcgatagct ttatctgact taagcgataa aaatgggtgg
    11701 gcgaacgaag agctaaataa gctaaccaga acgataaacg ataattcagt atctgcttta
    11761 gatgccgaaa catcagtaag actcttagag tctgctataa aagacttgca aaatgcaatc
    11821 caaaactccc aaggtgcatt ggatggcaat gtagcaaaaa tgaatcaact tgcagatgcg
    11881 gcagaaagaa aagctgcaac gataggcaag actgagcgtg aaactgctaa atatgcagct
    11941 acgctattag ctacaaccga tgaagctaaa aaaaatcttg attccacatt aagtaggatt
    12001 gacgcatcat acgatcaaat cgaagcctat caagccgaac aaaaagcctt acaagataaa
    12061 aagaccgcag atgcaaaagc tgccagagaa gctgaagcgg ctgcaaaaaa atccgctcaa
    12121 gccaagaagc aagttgtcga acagttgcga caaatggcta cacagtacga gattgctgtt
    12181 ttgaggcaaa agggaatgca tctcgaagcc gtaaaattag aagctggtat gcgtttagga
    12241 gctgcggcaa caaaagagca acgagaagaa gctgaaaaac tagcacaaag tatttatgga
    12301 gcaaccgcag caagtcagaa ctttaacgct atacaagccc aagcatctcc tgttactgca
    12361 ttagaccaac gacatcaaca acagctagct cagatcgaag aatataaaat cttgtatcca
    12421 caaaaaataa tggaagcaga agctgcgaga gctgcaatcg aagaacaata ccgccagcaa
    12481 cgaatggaag ctcaatggga ggagtggaag caagcgagcg acggggcgag aatgtttggt
    12541 gatgcggttg atgctgttgg ttcaagtgca acaagcacaa ttacggggct actaaatggc
    12601 acaatgtccg tgcgtgatgc tttcgcatca attgcaaata cgatcttaaa tagtgtagta
    12661 caaagccttg tcgaaatggg tatggctcaa gttaagcaaa tgattatggg gcaaactgct
    12721 gccaaggctt ctatggcggc gcaaatggtg caagctaaag cgttagctgc ttcatttgca
    12781 cccgcggcct ctatggtttc tcttgccaca cagggggcga atgctattcc cgctcaagct
    12841 gcgatcacgt caactatgag tatggctcaa gtcgccgcgg tgacaggtcg taaacttggc
    12901 ggccctgtat cagctagaca gatgtatcgt gtcggcgaga acaatcagcc cgaaatcttc
    12961 aaagcgagca atgggatgca atatatgatc cccggtcaaa gcggtcgtgt attcagcaac
    13021 aagcagtcgc aaggtcaagg tggaggcgaa agcaaaacag tagctgtcat cgtaaatcaa
    13081 accaatcact ttagcagcga tgaagccagt gcaaatcaag cggctgttgc aaaagcattg
    13141 agcaatcaaa tcaaggcttc cgtgagattg gaattgcagt cacaaatgcg agctggtgga
    13201 gttctagcga ggtaatcaat gcaaacattt aatttcaagg ttgagcaaga ctacactgtt
    13261 caaaatgagc ccagtgtcgt catactaaaa tttgccgatg gttacgagca aaccgctccc
    13321 aaagggttaa accacaatct gaaaaaatac caaggcatta ccgtaaaagc gaacaaagca
    13381 gaagcggtga agattcagca atttctcaat gctcacggtg ggtataagaa attcaactgg
    13441 cgcgatagaa caagcgatga gacggtaacg gttcgttgca gaagctggag ctccactaaa
    13501 ttaggtgcag tcattgagtt tacacttaat ttcgatgagg tgatttaatg ccaaaagccc
    13561 cccaaaaaaa tggcatcaga gttgataaaa ctcgaacaag atgccctgat tgagctgtgg
    13621 gagatagatc tcactcacat ctactctagc tcaaacccaa atcagcgcgg agagatattc
    13681 cgctttcaca atggcgtgag ccaaacacaa cagaacatct ggtggcaagg caatgaatac
    13741 caagcatacc cgattgccgc cgatggtttt gagatttcgg gtcaaggacc gtcaaatcgt
    13801 ccaacactca ctgtctctaa cctgtacggt gttgtcacgg tattagtaga agatttcggg
    13861 caacccgtag aggcgaaagt cagcagtgaa gagactgtag atggcaatat ccaaatgacg
    13921 gtggaactgc tgaaaaaaat ggatcaaatc gccgatcaac gctaccgtag aaatcagtta
    13981 aatgatttaa gaacaggtgg aacattatct aaataggtga agtatgccaa ttagtatttc
    14041 taaccaaatg aaactcgacc ttgccaaact tgagcaaaat gcaatgcttg atttgtacga
    14101 ggtagatttg cgtaaattgc aagacaaaga cggcaatgcc ggtggggttt atcgttttta
    14161 ctcgggttta aatgagctga aaaccagcgt agtttggcaa gggcggactt acgaccctta
    14221 ccccatcgag gcaacaggat ttgagcgtaa cagcagcggc ccaagcaatc gccctactct
    14281 tacgctatca aatctgtttg gcttagttac gggtattgct aatcagtttg atgagtgtat
    14341 cggggcgatt gttcgccgtc atcaggttta cgcccaatat ttagatgccg tgaattttgc
    14401 cgggggtaat gcgaaagctg atccaaatca ggaaataatc agtcattttg tgattgagca
    14461 gcttaccagc ctcacccgag aaacggcgac ctttacgctg gcattaccga ttgaaactga
    14521 taatgccaaa atccccagca gaattattat ggcggacacc tgcacttgga tttaccgctc
    14581 ggcggaatgt ggctacaccg gcaagcagta ttttgatgaa aaagacaagg caacatcaga
    14641 cccaaaagcc gataaatgca gccattgcct gaacggttgt gaattgcgag gcaatcagcg
    14701 taattttggt ggatttgtat cggtgaataa attggggtaa tgaatggaat tggaacaaca
    14761 aataatcgac tacgccctcc aacacgaacc gcacgaaatg tgcggctttg ttgtttttga
    14821 cggcaataaa aatcgattta tcccttgcga aaaccaagcg gaagacaaag ccaattactt
    14881 tgaaatctcc gatcttgatt acatcaaagc agaagaaaaa ggcgaactgg tagcagtagt
    14941 gcattcgcac cctgagccaa acggcaagcc ggtactctct acccttgatc gcaaaatgca
    15001 ggtacagacc ggtttagatt ggtggctagt gcataatcgg caaatccata aattccgcaa
    15061 tgtaccacat ttaatcgggc gtgagtttaa acacggcaca atggattgct acacgctcta
    15121 ccgtgatgcc tatatgcttg ccggttacga gatggacgag ttcgagcgac aagatgactg
    15181 gtggcatacc gggcaaaatc tatatttgga taatattcaa gggcaaggtt tcgagcgagt
    15241 agaaacccca caaatcggcg atgtgatttt aatgcaggtt ggagctgatg tacctaacca
    15301 cgcagcgatt tatattggcg aacagatggt aatccatcac agcccgaacc gattatctaa
    15361 gcgtgattta tatgatggct actggttacg ccatacccac agtatttggc ggcataaact
    15421 ggcggagaag ttagattttg atggcatatt gaatgatatt gctgtaaata actaacaaaa
    15481 aatgaccgct tgtaacaaaa acaaaccccg aagcgtttgc agcacttcgg ggtttttcat
    15541 atccacttac ctaactaaga ggacataaat taaatgaatg ataaacgatt tacattcaaa
    15601 tttctaggag ttcttatgga agcaattaat attaccccaa aagaaatcag aaaaacaatg
    15661 tggacagccg caataattct ctttttgttt gcgttcatct ggaaagcccc tgaatttatc
    15721 actgctattc gttggtggta actatgatta cagttaaatt ttacggacat cttagaaaat
    15781 tcggtacaga ctttagactt gaagttaaag acaccgcaga agccatcaga gcgttatgct
    15841 cacagcttac aggcttgcgt gaaacgttgc gagacggtat ttataaagtc cgcatcggga
    15901 aacagtattt agatgcctca gcccttgaaa aagggctttt ttattgcctg aagaaagggc
    15961 aaaccattca ttttacccct gttatcaaag gggcgaaaag cgggggtgtt ttccaagctg
    16021 tgttaggtgt agccttaatt ggagccgcat tttttctcgg gccggtcggt tggggagttc
    16081 taggggcttc ttccgcaatg atgatgggag caatgggggc atcaatgttg cttggaggag
    16141 ttgctcaaat gctcaccaaa atgccgaatg ccccgaatat cggtaatgaa aaagagaaag
    16201 aaaactcaac g
//
LOCUS       DANLZQ010000052        16124 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.052, whole genome shotgun sequence.
ACCESSION   DANLZQ010000052 DANLZQ010000000
VERSION     DANLZQ010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16124)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16124)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16124
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.052"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(100..1191)
                     /gene="mltC"
                     /locus_tag="PXE50_001451"
     CDS             complement(100..1191)
                     /gene="mltC"
                     /locus_tag="PXE50_001451"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     MltC"
                     /protein_id="HDL5622363.1"
                     /translation="MKKYAKYLPMLAIIPFLIACGSNKSTKKPKSTRVDYSKDTNGLD
                     ILAGQFSHNIDDIWGSNELLVASKKDYVKYTDKFYTRSHISFEEGVITIETLGNQNHL
                     RNSIIHTLLMGRDPKGIDLFASGDAPISSNPFLNGQVEDQFGRNITNVAIANDFATYL
                     LQNKVQTRRLKNGQTVSFVTIKMVAGHIEVRARQYLPLVRKMAKQYGIEPSLILGIME
                     VESAFNPYAISYANAIGLMQVVPRTAGRDIFARKGMGGQPSREYLYNPSNNIDAGTLY
                     LTILRDEYLDGIEDPVAKRYAMISAYNSGAGAVLRVFDSDRYSAIDRINDLSSDAVYR
                     ILTTAHPSSQARNYLRKVTTAREKYRNIR"
     gene            complement(1208..1477)
                     /locus_tag="PXE50_001452"
     CDS             complement(1208..1477)
                     /locus_tag="PXE50_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HDL5622364.1"
                     /translation="MARTVFCEYLKQEAEGLDFQLYPGELGKRIFDSISKQAWSEWIK
                     KQTMIVNEKKLSMMNPEHRKLLEQEMVNFLFEGKEIIIEGYKPVE"
     gene            complement(1481..2626)
                     /gene="mutY"
                     /locus_tag="PXE50_001453"
     CDS             complement(1481..2626)
                     /gene="mutY"
                     /locus_tag="PXE50_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HDL5622365.1"
                     /translation="MNSNSPFPLAKAKASDPFAKAVLAWFEQYGRKHLPWQQNKTLYQ
                     VWLSEVMLQQTQVATVIPYFARFMERFPTVIDLANASIDEVLHLWTGLGYYARARNLH
                     KAAIQIRDEFGGEFPTRFDDVLALTGVGRSTAGAILSSVLDAPHPILDGNVKRVLSRY
                     FAVEGWAGEKAVENRLWQLSESVTPDTQVADFNQAMMDLGAMICTRTKPKCLLCPLQE
                     NCKTNAMQAWDSFPAKKPKKTLPERQTYFLVLKSGSKVLLQKREAKGIWGGLFVFPQF
                     ESLEALKRSDFMQNLQISQQLTAFRHTFSHFHLDITPVLVETDLKKTSENSPLVVEEK
                     AGNYLSKVSSNADYWYDLHQHNEVGLATPVKRILDELAFSVKNEIKD"
     gene            2710..3102
                     /locus_tag="PXE50_001454"
     CDS             2710..3102
                     /locus_tag="PXE50_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDL5622366.1"
                     /translation="MKSPILGFHHIALIVSDYEKSKHFYTRILGAEIIAETYREQRAS
                     YKLDLRFKDGSQIELFSFPETPPRFTSPETCGLRHLAFRVENIEYAIAFLEQHQLPHE
                     GIRIDEITGKRFTFFRDPDDLPLEFYEV"
     gene            3103..3972
                     /locus_tag="PXE50_001455"
     CDS             3103..3972
                     /locus_tag="PXE50_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HDL5622367.1"
                     /translation="MLYLLIATLIWASSFIVGKVAISAFDPVQIMQIRLTLAAFIALP
                     FFIPAYKKIQKNQHIKVWLISFLTFPLYVILQFSGLKLTSAASAVALLGLNPLLTVLV
                     GYFCFKKQATRLDFILSLFACLGILIMASGSDDSGSINVLGLLLVTLGSLSFIVGMYL
                     SKEILQSVKVIDLTKIMLVQGAITALPITLLFAENWQLPTSLSAWASVAYLGIICTSL
                     AILLWNKGISQSSPILAGILLALEPVFGLLMALVFLSEQLSLVTWVGIIIVICTALLS
                     VLLPMMKRYKRLI"
     gene            3988..4701
                     /gene="sfsA"
                     /locus_tag="PXE50_001456"
     CDS             3988..4701
                     /gene="sfsA"
                     /locus_tag="PXE50_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA nuclease SfsA"
                     /protein_id="HDL5622368.1"
                     /translation="MKFPPLSHGILLRRYKRFLADIQLPNGEQITLHCPNTGAMTGCA
                     NPGDTVWFSTSHNPKRKYAHTWELTQTQAGDFICVNTLRANQLVQEALENQWISELAD
                     YQHILPEQKYGSENSRIDFLLKSDLLPDCFVEVKSTTLLTENGVGMFPDAKTERGQKH
                     LRELTKIAEQGLQAVIFFAILHTGIERFEVAKQIDPKYAELFAQAIAQKVQVLSYKMA
                     ISLENGQPIAATLTKKCEF"
     gene            4762..5283
                     /gene="hslV"
                     /locus_tag="PXE50_001457"
     CDS             4762..5283
                     /gene="hslV"
                     /locus_tag="PXE50_001457"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HDL5622369.1"
                     /translation="MTTIVCVRKDGKVAIGGDGQATLGNCIEKGTVRKVRRLYKDKVV
                     TGFAGSTADAFILRDLFEKKLELHQGHLVKSAVELAKEWRTERALRRLEAMMIVANDS
                     EFLLVSGSGDVIEPEQDVLAIGSGGNYAKAAALALLRTENNLSAKEIVAEALKIAGDI
                     DIYSNYNHVIEEV"
     gene            5540..6865
                     /gene="hslU"
                     /locus_tag="PXE50_001458"
     CDS             5540..6865
                     /gene="hslU"
                     /locus_tag="PXE50_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HslU--HslV peptidase ATPase subunit"
                     /protein_id="HDL5622370.1"
                     /translation="MMSMTPREIVSELDAHIIGQKDAKRAVAIALRNRWRRMQLPEDL
                     RQEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRD
                     LADVSMKLVRQQAVEKNKMRAQDAAEDRILDVLLPPAKDQWGNVQESDNNSTRQTFRK
                     KLREGQLDDKEIEIDVAAQVSVEIMTPPGMEEMTSQLQSLFEGMSPSKTKKRKMKIKD
                     ALKVMLDEEAAKLVNPEELKQQAIEAVEQHGIVFIDEIDKICKKGEHSGGDVSREGVQ
                     RDLLPIIEGSTVNTKHGMVKTDHILFICSGAFQVARPSDLLPELQGRLPIRVELKSLT
                     KEDFERILTEPNASLTLQYRELMKTEGVEIEFTKDGISRIAESAFRVNEKTENIGARR
                     LHTVLERLMDGISFDASERRGEKIIIDENYVSEALNDVVENEDLSRFIL"
     gene            6941..7819
                     /locus_tag="PXE50_001459"
     CDS             6941..7819
                     /locus_tag="PXE50_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF535 domain-containing protein"
                     /protein_id="HDL5622371.1"
                     /translation="MKNLYKWPAAQSLYPNQGKKSYAGKRFRYRLRSWLHHSKIKQFE
                     QFVTQNPQLIPLLNARPNYSYPVAHRFLDKRFSAKQRLQKITDNLLFLPQKLAHLPPL
                     WEQAVNFGEIIADFELWLNINEHQPMEGFWALELRHRPTNQLVYLLTFGKLDEALLIA
                     VIQGPNFEGSKELVKQLTKSCHGLRPAYLMVETMKALTAVLGYQSLLGIPQKYQNKSR
                     WVQSKRYVVDYDAIFAESGGKPGNYWQLPLELESKKIDEIPSKKRSMYRKRYEMLANL
                     KQTMELMLKTYTGLNG"
     gene            complement(7889..8605)
                     /locus_tag="PXE50_001460"
     CDS             complement(7889..8605)
                     /locus_tag="PXE50_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL5622372.1"
                     /translation="MKKTLLTLLFGCVVTAQAQDIKFVMEPSYPPFEMTEEKGEIIGF
                     DVDIANAICKEMNANCTFHSQPFDSLIQSLKQKQFDAAISGMGITEPRKKQVLFSEPY
                     FPSSAAFIAKKDTDFAKVKTIGVQNGTTYQHYLAKEKKEYNVKSYASYQNAILDVQNG
                     RIDAIFGDVPVLAEMARKHEGLDFVGEKINNPNYFGDGLGIATHLKNQVLVDQFNAAL
                     KTIKENGEYQKIYDKWMGGK"
     gene            9012..9515
                     /locus_tag="PXE50_001461"
     CDS             9012..9515
                     /locus_tag="PXE50_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-activating lysine-acyltransferase"
                     /protein_id="HDL5622373.1"
                     /translation="MNQSYFNLLGNITWLWMNSSLHKEWSCELLARNVIPAIENEQYM
                     LLIDNGIPIAYCSWADLNLETEVKYIKDINSLTPEEWQSGDRRWIIDWVAPFGHSQLL
                     YKKMCQKYPDMIVRSIRFYPKQKELGKIAYFKGGKLDKKTAKKRFDTYQEELATALKN
                     EFNFIKK"
     gene            9531..12392
                     /locus_tag="PXE50_001462"
     CDS             9531..12392
                     /locus_tag="PXE50_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RTX family hemolysin"
                     /protein_id="HDL5622374.1"
                     /translation="MGTRLTTLSNGLKNTLTATKSGLHKAGQSLTQAGSSLKTGAKKI
                     ILYIPQNYQYDTEQGNGLQDLVKAAEELGIEVQREERNNIATAQTSLGTIQTAIGLTE
                     RGIVLSAPQIDKLLQKTKAGQALGSAESIVQNANKAKTVLSGIQSILGSVLAGMDLDE
                     ALQNNSNQHALAKAGLELTNSLIENIANSVKTLDEFGEQISQFGSKLQNIKGLGTLGD
                     KLKNIGGLDKAGLGLDVISGLLSGATAALVLADKNASTAKKVGAGFELANQVVGNITK
                     AVSSYILAQRVAAGLSSTGPVAALIASTVSLAISPLAFAGIADKFNHAKSLESYAERF
                     KKLGYDGDNLLAEYQRGTGTIDASVTAINTALAAIAGGVSAAAAGSVIASPIALLVSG
                     ITGVISTILQYSKQAMFEHVANKIHNKIVEWEKNNHGKNYFENGYDARYLANLQDNMK
                     FLLNLNKELQAERVIAITQQQWDNNIGDLAGISRLGEKVLSGKAYVDAFEEGKHIKAD
                     KLVQLDSANGIIDVSNSGKAKTQHILFRTPLLTPGTEHRERVQTGKYEYITKLNINRV
                     DSWKITDGAASSTFDLTNVVQRIGIELDNAGNVTKTKETKIIAKLGEGDDNVFVGSGT
                     TEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVETGKALHEVTSTHTALV
                     GNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSKFNDAFNGGDGVDT
                     IDGNDGNDRLFGGKGDDILDGGNGDDFIDGGKGNDLLHGGKGDDIFVHRKGDGNDIIT
                     DSDGNDKLSFSDSNLKDLTFEKVKHNLVITNSKKEKVTIQNWFREADFAKEVPNYKAT
                     KDEKIEEIIGQNGERITSKQVDDLIAKGNGKITQDELSKVVDNYELLKHSKNVTNSLD
                     KLISSVSAFTSSNDSRNVLVAPTSMLDQSLSSLQFARAA"
     gene            12467..14593
                     /locus_tag="PXE50_001463"
     CDS             12467..14593
                     /locus_tag="PXE50_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_063101322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HDL5622375.1"
                     /translation="MEANHQRNDLGLVALTMLAQYHNISLNPEEIKHKFDLDGKGLSL
                     TAWLLAAKSLALKAKHIKKEISRLHLVNLPALVWQDNGKHFLLVKVDTDNNRYLTYNL
                     EQDAPQILSQDEFEACYQGQLILVTSRASVVGQLAKFDFTWFIPAVIKYRKIFLETLI
                     VSIFLQIFALITPLFFQVVMDKVLVHRGFSTLNIITVALAIVIIFEIVLSGLRTYVFS
                     HSTSRIDVELGAKLFRHLLSLPISYFENRRVGDTVARVRELDQIRNFLTGQALTSVLD
                     LLFSFIFFAVMWYYSPKLTLVILGSLPCYILWSIFISPILRRRLDEKFARSADNQAFL
                     VESVTAINMIKAMAVAPQMTDTWDKQLASYVSSSFRVTVLATIGQQGVQLIQKTVMVI
                     NLWLGAHLVISGDLSIGQLIAFNMLSGQVIAPVIRLAQLWQDFQQVGISVTRLGDVLN
                     SPTEQYQGKLSLPEIKGDISFKNIRFRYKPDAPTILNNVNLEIRQGEVIGIVGRSGSG
                     KSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIAL
                     SDPGMPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNN
                     PKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEI
                     VEQGKHHELLQNSNGLYSYLHQLQLN"
     gene            14605..16041
                     /locus_tag="PXE50_001464"
     CDS             14605..16041
                     /locus_tag="PXE50_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_140441352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HDL5622376.1"
                     /translation="MKIWLSGIYEFFLRYKNIWAEVWKIRKELDHPNRKKDESEFLPA
                     HLELIETPVSKKPRLIAYLIMLFLVVAIVLASVSKVEIVATAPGKLTFSGRSKEIKPI
                     ENAIVQEIFVKDGQFVEKGQLLVSLTALGSDADIKKTMASLSLAKLENYRYQTLLTAI
                     EKESLPVIDLSRTEFKDSSEEDRLRIKHLIEEQYTTWQKQKTQKTLAYKRKEAEKQTI
                     FAYVRKYEGATRIEQEKLKDFKALYKQKSLSKHELLAQENKLIEAQNELAVYRSKLNE
                     LENDLLNVKEELELITQFFKSDVLEKLKQHIENERQLRLELEKNNQRRQASMIRAPVS
                     GTVQQLKIHTIGGVVTTAETLMIIVPEDDVLEATALVPNKDIGFVAAGQEVIIKVETF
                     PYTRYGYLTGRIKHISPDAIEQPNVGLVFNATIAIDRKNLTSPDGRKIDLSSGMTITA
                     EIKTGERSVMSYLLSPLEESVTESLRER"
BASE COUNT         5079 a         3133 c         3240 g         4672 t
ORIGIN      
        1 agcttgcaac gtcaaacgtt tttttgcaaa tttaaaaaaa ccgctgctca aatgtgcttt
       61 ttttatactt ttcggctaaa aaacagcata attcacacat taacgaatat tgcgatattt
      121 ctctctggcg gtggttactt ttcttaaata atttctagct tgagaagatg gatgagcagt
      181 ggttaaaatt cgataaaccg catcagacga aagatcgtta attctatcaa tcgcagagta
      241 tcggtctgaa tcaaacactc gtaataccgc acctgctccg ctattgtatg cagaaatcat
      301 tgcatagcgt ttagccacag gatcttcaat tccatctaag tattcatcac gcaaaatagt
      361 caaataaagc gtacctgcat caatgttatt tgatggatta taaagatatt cacgacttgg
      421 ctgccctccc atacctttac gggcaaaaat atcacgcccg gcggtacgag gtacaacctg
      481 cattaagcca atcgcattgg catagctgat ggcataaggg ttgaatgctg attcgacttc
      541 cataatccct aaaatcaaac ttggctcaat accatactgc ttcgccattt tacgcaccag
      601 cggtaaatat tgtctggcac gtacttcaat gtgtcctgcc accattttaa tcgttacaaa
      661 gctcacagtt tgaccatttt tcaaacggcg tgtttgcacc ttattttgca acaaataagt
      721 cgcaaaatca ttggcgatgg caacattggt aatatttcgc ccgaattgat cttcaacctg
      781 tccgtttagg aaagggttag agctaatcgg tgcatcgcct gaggcaaata aatcaatccc
      841 tttcgggtct ctgcccatta ataaagtatg aataatcgaa ttgcgtagat gattctgatt
      901 ccctaaagtc tcaatcgtaa tcaccccttc ttcaaacgaa atatggctac gggtgtaaaa
      961 cttatccgta tatttcacat aatctttctt actggcaact aacagctcgt tacttcccca
     1021 aatatcatca atattgtgag aaaactgccc tgccaaaata tccaaaccat tggtatcttt
     1081 agaataatct actcgggtag attttggctt cttagtcgat ttattgctcc cacaagcaat
     1141 aagaaacgga ataattgcca acatcggcaa atatttagca tattttttca ttgtgattta
     1201 acctttatta ttcgaccggc ttatagcctt cgatgatgat ctctttacct tcaaataaaa
     1261 aattgaccat ctcttgttcg agcagtttac ggtgttcggg gttcatcata ctgagttttt
     1321 tctcattgac gatcattgtc tgttttttaa tccactcaga ccacgcttgc ttgctgattg
     1381 agtcaaaaat acgcttaccc agctcccccg gataaagttg aaaatctaaa ccttctgcct
     1441 cttgttttaa atattcgcaa aatacggtac gagccataat ttaatcctta atctcatttt
     1501 tcacactgaa tgccagctca tctaaaatac gtttaaccgg cgttgctaaa cccacttcgt
     1561 tatgttggtg caaatcatac caataatccg catttgaaga taccttagaa agataatttc
     1621 ctgctttttc ttcgacaaca agcggtgaat tttcacttgt ttttttcaaa tcggtttcta
     1681 ctaaaaccgg ggtaatatcc aaatgaaaat ggctaaaagt atgcctaaat gcagttaatt
     1741 gctgtgaaat ttgcaaattt tgcataaaat cagaccgctt gagagcctct aagctctcaa
     1801 attgcggaaa cacaaataag cccccccaaa tgccttttgc ttcccgtttt tgtaacagca
     1861 ctttcgagcc gcttttcagc actaaaaaat aggtttgacg ctccggcaag gtttttttcg
     1921 gtttcttggc aggaaagcta tcccacgctt gcattgcatt cgttttacaa ttttcttgta
     1981 gcgggcagag caagcactta ggctttgtac gggtgcaaat catcgcccct aaatccatca
     2041 tcgcttggtt aaagtctgcc acttgggtat caggcgtcac actttcgctt aattgccaaa
     2101 ggcgattttc caccgctttt tcacccgccc agccttctac tgcaaaatag cggcttaaca
     2161 cccgtttgac attgccatct aaaatcgggt gtggggcatc taacacagaa gacaaaatcg
     2221 cccctgcagt acttctgccc actccggtta atgccaacac atcatcaaat cgggtaggaa
     2281 attcaccgcc aaactcatct cgaatttgaa ttgccgcttt atgcaaattt cttgcccgag
     2341 cgtaataacc cagccctgtc cacaaatgca atacttcatc aatcgaggca ttagctaagt
     2401 caattacggt gggaaatcgt tccataaaac gtgcaaaata aggaataacg gtcgctactt
     2461 gagtttgttg caacattacc tccgacaacc aaacctgata cagcgtttta ttttgctgcc
     2521 aaggtaaatg tttccgccca tattgctcaa accaagctaa aacagctttg gcaaacggat
     2581 cagaagcttt tgctttcgct aaaggaaatg gggaattgct gttcattaaa aatcttgaaa
     2641 tccgaaaaat aaattatcat actgcaagcg gtcagtttta ccaaaaattt tacacattaa
     2701 ggaaaaaaga tgaaatcgcc cattttaggt ttccaccaca ttgcattaat tgtttccgat
     2761 tacgaaaaat ccaaacattt ctacacccgc attttagggg cagagatcat cgcagaaacc
     2821 taccgagagc aacgtgccag ctataaatta gatttacgct ttaaagatgg ctcacaaatt
     2881 gaattattca gttttcctga aacgccgcct cgtttcacct cgcccgaaac ctgcgggctt
     2941 cgccatttgg catttcgagt ggaaaatatt gaatatgcca tcgcattttt agaacaacat
     3001 caattaccgc atgaagggat ccgaattgat gagatcaccg gcaaacgctt cacgtttttc
     3061 cgagatccgg acgatctgcc gttagagttt tacgaggtct aaatgttata tttactgatt
     3121 gcaaccctga tttgggcgag ttcattcatt gtaggtaaag tggcgatttc agcctttgac
     3181 cctgtccaaa ttatgcaaat tcggctgacg ttagcggcgt ttatcgctct gccgtttttt
     3241 attcctgcgt ataaaaaaat ccagaaaaat cagcacatta aagtctggct gattagtttt
     3301 ctcacttttc ctctgtacgt gatcttacaa ttttccggct tgaaattaac ttccgcagca
     3361 agtgccgtgg cactactcgg gctaaacccg cttttaactg tgttagtcgg ctatttttgt
     3421 ttcaaaaaac aggcaaccag gctcgatttt atcctaagtt tatttgcctg cttggggatt
     3481 ttaattatgg catcgggtag cgatgatagc ggttcaatca atgtattagg attattgctt
     3541 gtaaccttag gcagtttaag ttttattgtg ggaatgtacc tcagcaaaga gattctgcaa
     3601 tcagtaaaag tgatcgattt aaccaagatc atgctggtgc aaggggcaat taccgcctta
     3661 cctattacct tactctttgc agaaaattgg caactgccaa ccagtctctc agcatgggcg
     3721 agcgtagcat atttaggcat tatttgtacc agcttggcaa tattgttatg gaacaaaggc
     3781 atcagccaat cttcgcctat tcttgcaggt attctactcg cacttgaacc ggtattcgga
     3841 ctgctaatgg cattggtctt tttatcagaa cagctcagtt tagtgacttg ggttgggatt
     3901 attattgtta tttgcaccgc cttactctcc gttttgctac cgatgatgaa aagatacaag
     3961 cggttaattt aacaggattt tttgcaaatg aaatttcccc ctctttccca cggcatttta
     4021 cttcgccgtt ataaacgttt tcttgccgat attcagttgc caaatggcga acaaattacc
     4081 ctccattgcc caaataccgg tgcgatgaca ggctgtgcca accccggtga tacagtttgg
     4141 ttttccacct ctcataaccc caaacgtaaa tatgctcaca cttgggaact aacccaaacc
     4201 caagcggggg attttatttg tgtcaatacc ttgagagcca atcagcttgt acaagaagcc
     4261 ttggaaaatc aatggattag cgagcttgcg gattatcagc acattctgcc tgaacaaaaa
     4321 tatggcagtg aaaacagtcg gattgatttt ttgctcaaat cggaccttct gccggattgt
     4381 tttgtggaag tgaaatctac caccctttta accgaaaacg gtgtgggaat gttccccgat
     4441 gccaaaaccg agcgggggca aaaacatttg cgggagctga cgaaaatcgc tgaacagggc
     4501 ttacaagcgg tcattttttt cgctattttg cacacaggta ttgaacggtt tgaagtggca
     4561 aagcagatag accccaaata tgccgaatta ttcgctcaag ccattgcaca aaaagtgcag
     4621 gttctctcct ataaaatggc aatttcattg gaaaacgggc aacctattgc ggcaacctta
     4681 acaaagaaat gtgagtttta agcttgaaaa cacacagcat atccccatat aagccaaagt
     4741 ttttaaaaag aaggatttag tatgacaacg attgtatgcg tgcgtaaaga cggaaaagtg
     4801 gctatcggtg gtgatggtca ggcaacgctt ggaaattgta tcgagaaagg cacggtgcgg
     4861 aaagttcgcc gtttgtataa agacaaagtg gtgacaggct ttgccggctc gaccgctgat
     4921 gcctttattt tgcgtgattt attcgagaaa aaattggagt tacaccaagg gcatttagtg
     4981 aaatcggcag tggaactggc aaaagagtgg cgtaccgagc gtgctttacg ccgtttagaa
     5041 gcgatgatga ttgtcgccaa tgacagcgag tttttattgg tttcaggttc gggcgatgtg
     5101 attgagccgg agcaagatgt gctggcgatt ggttcaggcg gtaactatgc gaaagccgct
     5161 gctcttgcgt tattacgcac cgaaaataat ttatctgcaa aagaaatcgt tgcggaagcg
     5221 ttaaaaatcg ccggcgatat tgatatttac agtaactaca atcacgtgat tgaagaagtt
     5281 tagttaaata actctctccc cttgtgggac aaatgtttac atttgaacgt tggctttgcc
     5341 aacggctcca caggagcgag cgtagcgagt attgagaccg aaaaatattt cgttcagaaa
     5401 tatttttcag agagaggggt taatgcaaaa cgtttaagaa aaaagaccgc ttgttaccct
     5461 ctccctgatt tttcttctga acaaagaaaa atctgtccct ctcccacaag gggagagggt
     5521 aattaattta aggaataaca ttatgtcaat gacaccccgt gaaatcgtct cagaattaga
     5581 cgcacacatt atcggacaaa aagatgcaaa acgtgcggta gcaattgctt tgcgtaaccg
     5641 ctggagaaga atgcagttgc cggaagatct ccgccaagaa gtgaccccca aaaatatttt
     5701 aatgatcggt ccgaccggtg tgggtaaaac cgaaatcgcc cgccgtttgg cgaagcttgc
     5761 caatgcccct tttatcaaag ttgaggcaac caaattcact gaagtggggt atgtgggtaa
     5821 agaagtggat tcgattatcc gtgatctagc tgatgtgtcg atgaaattag tccgccaaca
     5881 agcggtcgaa aaaaataaaa tgcgtgcaca agatgcagcg gaagatcgca ttttagacgt
     5941 attattgcca ccggcgaaag atcagtgggg aaatgtgcag gaatccgaca ataattctac
     6001 ccgccaaact ttccgcaaaa aattgcgtga agggcaatta gacgataaag agattgaaat
     6061 tgacgtggca gctcaagtga gcgttgagat tatgaccccg ccgggaatgg aagagatgac
     6121 ctcgcaatta caatcgctgt ttgagggaat gtcgccaagc aaaaccaaaa aacgcaaaat
     6181 gaaaatcaaa gatgcgttaa aggtgatgct tgatgaagaa gcggcgaaat tagtaaatcc
     6241 tgaagagctg aaacagcaag cgattgaagc ggtggaacag cacggtattg tctttattga
     6301 tgagatcgac aaaatctgta aaaaaggcga gcattcgggt ggagatgttt ctcgtgaagg
     6361 tgttcagcgt gatttacttc caatcattga aggctcaacg gtaaatacca agcatggtat
     6421 ggtgaaaacc gaccatattc tgtttatctg ctcgggggca ttccaagtgg ctcgcccgtc
     6481 tgatttactc ccagaattac agggtcgctt gccgattcgt gtggagttaa aatcgcttac
     6541 caaagaagat tttgagcgta ttttaaccga accgaatgcc tcattaacct tgcaatatcg
     6601 tgagttgatg aaaactgaag gcgtggagat tgagttcact aaagacggta tcagccgtat
     6661 tgcagaaagt gcattccgtg tgaacgagaa aaccgaaaac atcggggcaa gacgtttaca
     6721 caccgtgctt gagcgtttga tggacggcat ttcgttcgat gccagcgaac gccgtggtga
     6781 aaaaatcatc attgatgaaa actatgtttc cgaagcgtta aatgacgtgg tggaaaacga
     6841 agatttaagt cgctttattt tgtagtttta agttatacaa gcggttattt tagcgaaaaa
     6901 tcttgcgaat tagccgcttt tcatattgtt agttgtaaaa atgaaaaatc tatacaaatg
     6961 gcctgctgca caatcgcttt atccaaatca gggaaagaag tcttacgcag ggaaacgttt
     7021 tcgttaccgt cttcgctctt ggttgcatca ttccaaaatc aagcaatttg agcagttcgt
     7081 tacacaaaat ccacaactga ttccgctctt aaatgctcga ccaaattaca gctaccccgt
     7141 ggctcaccgc tttttagata agcgtttcag tgcaaaacaa cgcttacaaa aaatcacaga
     7201 taacctgctg tttttaccgc aaaaattggc tcatttacca cctctatggg aacaagcggt
     7261 caattttggt gaaattattg cagattttga gttatggctt aacatcaatg aacatcagcc
     7321 gatggaaggt ttttgggcat tagaacttcg ccacagaccg actaatcagc tagtttattt
     7381 attaacattt ggtaagttag atgaagcctt gttgatagcc gtaattcaag gtccgaattt
     7441 tgaaggttca aaagagctgg tgaaacaatt aaccaaaagt tgccacggct tacgcccggc
     7501 ctatttaatg gttgaaacga tgaaggcttt aacggctgtt cttggctatc agagtttact
     7561 aggcattcca cagaaatacc agaataaatc ccgctgggtg caaagtaagc gctatgtagt
     7621 ggattatgat gctatttttg cggaatcggg cggaaagccg ggaaattatt ggcagttacc
     7681 ccttgaattg gaaagtaaaa aaatagatga aattccaagc aaaaaacgct caatgtatcg
     7741 caagcgttat gaaatgctag ctaatttaaa gcagaccatg gagcttatgc ttaaaactta
     7801 tactggctta aatgggtaaa tcaaagaata caagcggtca aaatctgcaa aactttgcaa
     7861 aactttgcaa aaaatgaccg cttacaagtt acttgccgcc catccattta tcatagattt
     7921 tttgatattc gccattctct ttaatcgttt ttaatgctgc attgaattga tcaactaata
     7981 cttggttttt caagtgagtt gcaatgccta aaccatcacc aaaatagttt ggattattga
     8041 ttttctcccc tacaaaatct agcccttcgt gttttcttgc catctcagcc aataccggca
     8101 catcgccaaa aatagcatca attcgcccat tttgcacatc taaaatagca ttttgataag
     8161 aggcataaga tttcacattg tactcttttt tctcttttgc taaatagtgt tggtaagtag
     8221 tcccattttg cacaccaatc gttttcacct tagcaaaatc tgtatctttt ttcgcaatga
     8281 aggcagcaga gcttggaaag taaggctcgc taaataatac ttgtttctta cgtggttccg
     8341 taatacccat acctgaaatt gcagcatcaa attgtttttg ttttaggctt tggattaagc
     8401 tatcaaaagg ttggctatgg aatgtacaat ttgcattcat ctctttacag atagcatttg
     8461 caatatccac atcaaaaccg ataatttctc ccttctcttc ggtcatttca aatggaggat
     8521 agcttggctc catcacaaat ttgatatctt gtgcctgcgc agtaaccaca cacccgaata
     8581 aaagggtcaa aagtgttttt ttcataaaaa gtccctgtgt tttcattata aggattacca
     8641 ctttaacgca gttactttct taaaaaaagt cttcttttca taaagtttgt tttatgtcat
     8701 acaaacacat caaattgaga tgtagtttct caatcctctt gattcctcta tctcaaaaaa
     8761 acaacccaaa agaaaaaaga aaagtatatg ttacattaat attacaatgt aattattttg
     8821 tttaatttcc ctacattttg tataacttta aaacactcct ttttctcttc tgattatata
     8881 aaagacaaaa aatacaattt aagctacaaa aaacaacaaa aaacaacaaa aaacacgaca
     8941 ataagatcga gtaatgatta tattatgtta taatttttga cctaatttag aataattatc
     9001 gagtgcaaat tatgaatcaa tcttatttta acttactagg aaacattact tggctatgga
     9061 tgaactcctc cctccacaaa gaatggagct gtgaactact agcacgcaat gtgattcctg
     9121 caattgaaaa tgaacaatat atgctactta tagataacgg tattccgatc gcttattgta
     9181 gttgggcaga tttaaacctt gagactgagg tgaaatatat taaggatatt aattcgttaa
     9241 caccagaaga atggcagtct ggtgacagac gctggattat tgattgggta gcaccattcg
     9301 gacattctca attactttat aaaaaaatgt gtcagaaata ccctgatatg atcgtcagat
     9361 ctatacgctt ttatccaaag cagaaagaat taggcaaaat tgcctacttt aaaggaggta
     9421 aattagataa aaaaacagca aaaaaacgtt ttgatacata tcaagaagag ctggcaacag
     9481 cacttaaaaa tgaatttaat tttattaaaa aatagaagga gacatccctt atgggaacta
     9541 gacttacaac cctatcaaat gggctaaaaa acactttaac ggcaaccaaa agtggcttac
     9601 ataaagccgg tcaatcatta acccaagccg gcagttcttt aaaaactggg gcaaaaaaaa
     9661 ttatcctcta tattccccaa aattaccaat atgatactga acaaggtaat ggtttacagg
     9721 atttagtcaa agcggccgaa gagttgggga ttgaggtaca aagagaagaa cgcaataata
     9781 ttgcaacagc tcaaaccagt ttaggcacga ttcaaaccgc tattggctta actgagcgtg
     9841 gcattgtgtt atccgctcca caaattgata aattgctaca gaaaactaaa gcaggccaag
     9901 cattaggttc tgccgaaagc attgtacaaa atgcaaataa agccaaaact gtattatctg
     9961 gcattcaatc tattttaggc tcagtattgg ctggaatgga tttagatgag gccttacaga
    10021 ataacagcaa ccaacatgct cttgctaaag ctggcttgga gctaacaaat tcattaattg
    10081 aaaatattgc taattcagta aaaacacttg acgaatttgg tgagcaaatt agtcaatttg
    10141 gttcaaaact acaaaatatc aaaggcttag ggactttagg agacaaactc aaaaatatcg
    10201 gtggacttga taaagctggc cttggtttag atgttatctc agggctatta tcgggcgcaa
    10261 cagctgcact tgtacttgca gataaaaatg cttcaacagc taaaaaagtg ggtgcgggtt
    10321 ttgaattggc aaaccaagtt gttggtaata ttaccaaagc cgtttcttct tacattttag
    10381 cccaacgtgt tgcagcaggt ttatcttcaa ctgggcctgt ggctgcttta attgcttcta
    10441 ctgtttctct tgcgattagc ccattagcat ttgccggtat tgccgataaa tttaatcatg
    10501 caaaaagttt agagagttat gccgaacgct ttaaaaaatt aggctatgac ggagataatt
    10561 tattagcaga atatcagcgg ggaacaggga ctattgatgc atcggttact gcaattaata
    10621 ccgcattggc cgctattgct ggtggtgtgt ctgctgctgc agccggctcg gttattgctt
    10681 caccgattgc cttattagta tctgggatta ccggtgtaat ttctacgatt ctgcaatatt
    10741 ctaaacaagc aatgtttgag cacgttgcaa ataaaattca taacaaaatt gtagaatggg
    10801 aaaaaaataa tcacggtaag aactactttg aaaatggtta cgatgcccgt tatcttgcga
    10861 atttacaaga taatatgaaa ttcttactga acttaaacaa agagttacag gcagaacgtg
    10921 tcatcgctat tactcagcag caatgggata acaacattgg tgatttagct ggtattagcc
    10981 gtttaggtga aaaagtcctt agtggtaaag cctatgtgga tgcgtttgaa gaaggcaaac
    11041 acattaaagc cgataaatta gtacagttgg attcggcaaa cggtattatt gatgtgagta
    11101 attcgggtaa agcgaaaact cagcatatct tattcagaac gccattattg acgccgggaa
    11161 cagagcatcg tgaacgcgta caaacaggta aatatgaata tattaccaag ctcaatatta
    11221 accgtgtaga tagctggaaa attacagatg gtgcagcaag ttctaccttt gatttaacta
    11281 acgttgttca gcgtattggt attgaattag acaatgctgg aaatgtaact aaaaccaaag
    11341 aaacaaaaat tattgccaaa cttggtgaag gtgatgacaa cgtatttgtt ggttctggta
    11401 cgacggaaat tgatggcggt gaaggttacg accgagttca ctatagccgt ggaaactatg
    11461 gtgctttaac tattgatgca accaaagaga ccgagcaagg tagttatacc gtaaatcgtt
    11521 tcgtagaaac cggtaaagca ctacacgaag tgacttcaac ccataccgca ttagtgggca
    11581 accgtgaaga aaaaatagaa tatcgtcata gcaataacca gcaccatgcc ggttattaca
    11641 ccaaagatac cttgaaagct gttgaagaaa ttatcggtac atcacataac gatatcttta
    11701 aaggtagtaa gttcaatgat gcctttaacg gtggtgatgg tgtcgatact attgacggta
    11761 acgacggcaa tgaccgctta tttggtggta aaggcgatga tattctcgat ggtggaaatg
    11821 gtgatgattt tatcgatggc ggtaaaggca acgacctatt acacggtggc aagggcgatg
    11881 atattttcgt tcaccgtaaa ggcgatggta atgatattat taccgattct gacggcaatg
    11941 ataaattatc attctctgat tcgaacttaa aagatttaac atttgaaaaa gttaaacata
    12001 atcttgtcat cacgaatagc aaaaaagaga aagtgaccat tcaaaactgg ttccgagagg
    12061 ctgattttgc taaagaagtg cctaattata aagcaactaa agatgagaaa atcgaagaaa
    12121 tcatcggtca aaatggcgag cggatcacct caaagcaagt tgatgatctt atcgcaaaag
    12181 gtaacggcaa aattacccaa gatgagctat caaaagttgt tgataactat gaattgctca
    12241 aacatagcaa aaatgtgaca aacagcttag ataagttaat ctcatctgta agtgcattta
    12301 cctcgtctaa tgattcgaga aatgtattag tggctccaac ttcaatgttg gatcaaagtt
    12361 tatcttctct tcaatttgct agagcagctt aatttttaat gattggcaac tctatattgt
    12421 ttcacacatt atagagttgc cgttttattt tataaaagga gacaatatgg aagctaacca
    12481 tcaaaggaat gatcttggtt tagttgccct cactatgttg gcacaatacc ataatatttc
    12541 gcttaatccg gaagaaataa aacataaatt tgatcttgac ggaaaagggc tttctttaac
    12601 tgcttggctt ttagctgcaa aatcgttagc gttgaaagcg aaacacatta aaaaagagat
    12661 ttcccgctta cacttggtga atttaccggc attagtttgg caagataacg gtaaacattt
    12721 tttattggta aaagtggata ccgataataa ccgctattta acttacaatt tggaacaaga
    12781 tgctccacaa attctgtcac aagacgaatt tgaagcctgc tatcaagggc agttaatttt
    12841 ggtcacgtcc agagcttccg tagtaggtca attagcaaag ttcgatttca cctggtttat
    12901 tccggcggtg atcaaatacc gaaaaatctt tctagaaacc ttgattgttt cgatcttttt
    12961 gcaaattttt gccctaatta caccgctatt cttccaagtt gttatggata aagtactggt
    13021 gcatcgaggt ttttcaacct tgaatatcat tacggttgcc ttagctattg tgatcatctt
    13081 tgaaattgta ctaagtggtt tgagaaccta tgttttttct catagcacta gccgtattga
    13141 tgttgaatta ggcgctaaat tatttcgaca tttattatca ctacccattt cttattttga
    13201 aaacagacga gttggagata cagtcgctag ggttagagaa ttagatcaaa ttcgtaattt
    13261 ccttaccgga caagcattaa cctcggtgtt agatctctta ttctctttta tcttttttgc
    13321 cgtaatgtgg tattacagcc caaaattaac cttggtaatt cttggttcat tgccctgcta
    13381 tattttatgg tcaattttta ttagtccgat tttaagacgg cgtttagatg agaaatttgc
    13441 ccgaagtgct gataaccaag cattcttagt tgagtcggta acagccatca atatgattaa
    13501 agcgatggcg gttgctccac aaatgacgga tacatgggat aaacagctgg caagctatgt
    13561 ttcatcaagt ttccgtgtca ccgtattagc aaccattggg caacaaggtg tacaacttat
    13621 tcaaaaaacc gttatggtga ttaacctttg gttaggggca cacttagtta tttcaggcga
    13681 tctgagtatt gggcaattaa ttgcctttaa tatgctatca gggcaagtga ttgcaccggt
    13741 gattcggctg gctcagctct ggcaagattt ccaacaagtt gggatttccg tcactcgctt
    13801 aggtgatgtt ttaaactctc caaccgaaca atatcaaggc aaattatcac taccagaaat
    13861 aaaaggcgat atctcattta aaaatatccg ctttagatat aaaccagatg caccaactat
    13921 tttaaataat gtgaatttag aaattaggca aggagaagtg attgggattg ttggacgttc
    13981 cggttcaggc aaaagtactc tgactaaatt actgcaacgt ttttatattc ctgaaaatgg
    14041 gcaggttttg attgatggac atgatctagc cttagctgat ccaaactggc tacgccgtca
    14101 aataggtgta gtgctgcaag ataatgtgtt attaaaccgc agtatccgag aaaatattgc
    14161 gctatcagat ccaggaatgc caatggagcg agtaatttat gcagcaaaat tagcaggggc
    14221 tcacgatttt atttcagaat tgcgtgaagg ttataacacc attgtgggtg aacaaggagc
    14281 ggggctttca ggcgggcaac gccaacggat tgcgattgct cgagctttgg taaacaaccc
    14341 gaaaatcctg atttttgatg aggcaaccag tgccctcgat tacgaatctg agcatattat
    14401 tatgcaaaat atgcaaaaaa tatgccaagg cagaaccgtg attttgattg cacatcgttt
    14461 atcgaccgtc aaaaatgcgg atcgaattat tgtgatggaa aagggggaaa ttgttgagca
    14521 aggcaagcac cacgaattac tgcaaaacag taacggactt tattcctact tacaccaatt
    14581 acaacttaat taagaaggaa aacaatgaaa atatggctta gtggtattta tgaatttttc
    14641 ctacgctata aaaacatttg ggcagaagta tggaaaattc gtaaagaatt agaccaccca
    14701 aacagaaaaa aagacgaaag tgaattttta ccggcacatt tagaactgat tgaaaccccg
    14761 gtttctaaaa aaccacgtct aattgcttat ttgattatgc tatttttagt tgtggcaatt
    14821 gtgcttgcca gtgtaagcaa agttgaaatt gtggcgactg ctcccggtaa attaactttt
    14881 agtggcagaa gtaaagaaat taaaccgatt gaaaacgcca ttgtacaaga aattttcgtt
    14941 aaagatgggc agtttgtgga aaaagggcaa ttattagtca gcttaactgc attgggttct
    15001 gatgcagata tcaaaaagac catggcttca ctttctttag ctaaactgga gaactatcgc
    15061 taccaaactt tgcttactgc cattgaaaaa gagtccttgc cggtgattga tttatctaga
    15121 accgaattta aagattcatc ggaagaagat cgactacgta ttaaacactt aattgaggag
    15181 caatacacca cttggcaaaa acaaaaaaca cagaaaactt tagcgtataa gcgtaaagag
    15241 gctgaaaaac aaacaatatt tgcctatgtc cgtaaatatg aaggtgcaac acgtattgaa
    15301 caagaaaaat taaaagactt taaggcactt tataaacaga agtctttatc taagcacgaa
    15361 cttcttgcgc aagaaaataa attaattgag gctcagaatg agctagctgt ttatcgctca
    15421 aaattaaatg aattagaaaa tgatctactc aatgtaaaag aagaacttga attgatcacg
    15481 caattcttta aaagcgatgt gttggaaaaa ttaaagcaac atattgaaaa tgaacgccaa
    15541 cttcggctcg agttagaaaa aaataatcaa cgcagacagg cctcgatgat cagagcaccg
    15601 gtttccggta cggttcagca actgaaaatt cacactatag gtggtgttgt tacgactgct
    15661 gaaaccttga tgatcattgt gccggaagac gatgtgttag aggccaccgc tctggttcca
    15721 aacaaagata tcggctttgt tgcagcaggg caggaggtga ttattaaagt ggaaactttc
    15781 ccttatacac gctatggtta tctaactggt cgaattaaac atattagccc ggatgcgatt
    15841 gaacaaccta atgtaggctt agtttttaat gcaactatag ctatagatag gaagaatcta
    15901 acatcgcctg atgggcgaaa aattgatttg agttcaggta tgacaataac tgctgaaatc
    15961 aaaaccggtg aacggagtgt aatgagttat ttactcagcc cattagaaga atctgtcaca
    16021 gaaagtttaa gggaacgcta atcgaaccaa aacaaagcca taaaagccat tttgagcttt
    16081 tatggcttta ttttttagtc cacaagcggt caaaaaagcc caat
//
LOCUS       DANLZQ010000053        16072 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.053, whole genome shotgun sequence.
ACCESSION   DANLZQ010000053 DANLZQ010000000
VERSION     DANLZQ010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16072)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16072)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16072
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.053"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(143..946)
                     /locus_tag="PXE50_001465"
     CDS             complement(143..946)
                     /locus_tag="PXE50_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL5622377.1"
                     /translation="MIHLFEKHLNQSNLAENTQSAYLFAVKQYHKKFDQLSKINLQRY
                     KVFLIENYKPQAVNLRLRAINYYLEFIKKEKWKLSFVKVQQKPFLENVISEADYTYFK
                     KCLKKDNELYWYFVIRFMAATGSRVSELIQIKCEHIKIGYLDLYSKGGKLRRIYIPKS
                     LQKECSEWLRLNNKHNGFIFLNKYGDRITTRGIASQLKVFARRYKLDPKIVYPHSFRH
                     RFAKSFLERFNDIAFLADLMGHESIETTRIYLRKTSTEQQEIVNKIIDW"
     gene            complement(1049..2350)
                     /locus_tag="PXE50_001466"
     CDS             complement(1049..2350)
                     /locus_tag="PXE50_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL5622378.1"
                     /translation="MWVRLGDICLKITDGTHHSPPNIDKSDFLYITAKNIKKDGLDLS
                     KISYVTKEIHNEIFSRCNPEKGDILYIKDGATTGVSIINTLNEPFSMLSSVALIKTSQ
                     EIDNEYLNYVMNSHYFYNISIGSMSGTGIPRITLTKLESYLVPVPPLLEQQRIVQKIE
                     ELLPLVERYEQTEQQLTKLNNTFPEQLKKSVLHAAIQGKLTEQDPNDELASCLIERIK
                     AEKNRLIAEKKLKKPKSVSEIVMRDNLPYEIKAGQERCIADEVPFEIPQNWTWVRLGE
                     VGDWSSGATPNRHNPEYYNGTIPWLKTGDLNNGIISSIPEFITDKALQECSVRLNPVG
                     SVLIAMYGATIGKLGILKIAATTNQACCACIPFNGIYNKFLFYYLMSQKAEFQKKSEG
                     SGQPNISKEKIINYLFPLPPIHEQHRIVQKIEQLFAEIEKL"
     gene            2528..4804
                     /gene="gshAB"
                     /locus_tag="PXE50_001467"
     CDS             2528..4804
                     /gene="gshAB"
                     /locus_tag="PXE50_001467"
                     /EC_number="6.3.2.2"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate--cysteine ligase
                     GshA/glutathione synthetase GshB"
                     /protein_id="HDL5622379.1"
                     /translation="MKLQKLIRENHLALLFQQGNFGLEKESQRVDRNGNIVTTPHPAV
                     FGNRSYHPYIQTDFAESQLELITPPNAKLEDSFRWLSAIHEVVLRSLPEEEYIFPLSM
                     PAGLPPEEQIQEAQFDNPEDVQYRQHLSKNYGKYKQMVSGVHYNFQLSTEFVEKAFAL
                     QTEYSELKAFQNALYMKLANNFLRYQWILLYLLAATPTVESQYFYEKSPLARGQLVRS
                     LRSSPYGYVNSEKVVVNHDSLESYVESLEANVANGLLIAEKEFYSNVRLRGGKKAREL
                     LENGVKYAEFRLFDLNPFAPYGIELNDAKFIHYFLLGMLWLEETSGQKEVEIGKQKLY
                     QVALEDPRTETAFRAEGEAILNQLLAMLEELSAGQESLDLVREKLAQFADPSKTLNGR
                     LIAAIEEVGSYKALGAKLAQTYKAQAFERFYALSAFDNMELSTQALFFDLIQQGIEVE
                     VLDENDQFLALKFGDHLEYVKNGNMTSRDQYISPLIMENKVVTKKVLAKAGFNVPKSV
                     EFTNLEQAVAHYPLFEGKAVVIKPKSTNYGLGITIFQQAVKNREDFAKAVEIAFREDK
                     EVMVEDYLVGTEYRFFVLGDETLAVLLRVPANVVGDGIHSVKELVERKNDDPLRGDGS
                     RSPLKKIALGEIEQLQLKEQGLTVDSVPAKGQTVQLRANSNISTGGDSIDMTDQMHES
                     YRQIAVGIAQAMGAKVCGVDLIIPDLTKPAEPNLSSWGVIEANFNPMMMMHIFPYQGK
                     SRRLTKAVIKMLFPEIGN"
     gene            5126..6103
                     /gene="manX"
                     /locus_tag="PXE50_001468"
     CDS             5126..6103
                     /gene="manX"
                     /locus_tag="PXE50_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IIAB"
                     /protein_id="HDL5622380.1"
                     /translation="MSIAIIIATHGVAAEQLLKTTEMLIGEQEDVAYIDFVPGENAET
                     IMGKYQALVEGPLSHCDQVLFLVDMWGGSPFNAANRFQDGKSGMDVVAGVNIPMLVNT
                     CMARDDVESLEELVEVALEAGSTGIRSLNHQPEVAEVQTATPAQETAAVQQPEIVDDG
                     RRMTIALARIDDRLIHGQVATVWTKESKVNRIIVVNEGVAKDSVRTTMLKSVAPLGVT
                     AHVVDVPKMIRVYNNPEYADDRVMLLFTNPSDVLALIEGGVPLNSINVGGISHKEGKQ
                     MVSHSVAVDQNDIDAFKAIDAKGVELEVRKVSSDSRQYMMDLLKKHNLI"
     gene            6115..6915
                     /locus_tag="PXE50_001469"
     CDS             6115..6915
                     /locus_tag="PXE50_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005716709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter subunit
                     IIC"
                     /protein_id="HDL5622381.1"
                     /translation="MELSALQIVLLFLVACISGMGSILDEWQTHRPLIACTMIGLVLG
                     DVTTGVIVGGSLELLALGWMNIGAAVAPDAALASIVSTILVIVGRQDISTGIAIAIPL
                     AAAGQVLTYVVRAITVGFQHAADKSIEDGNLSRLDWLHRGALLLQAMRIAIPALIVAL
                     TAGTDAVQTMLNAIPEVVTTGLKIAGGFIAVVGYAMVINMMRAGHLMPFFFAGFVIAG
                     FTDFNLVALGVLGTVIAMVYIHMHPKYNKSQQVVVAAAPKNDLDNRLD"
     gene            6929..7765
                     /locus_tag="PXE50_001470"
     CDS             6929..7765
                     /locus_tag="PXE50_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005564636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IID"
                     /protein_id="HDL5622382.1"
                     /translation="MTTEIKKVTKSDLNAVVRRSNLFQGSWNFERMQALGFAYAMVPV
                     IKRLYPDPNGPGRKEAIKRHSEFFNTQPFVGAPILGVTIAMEEERANGKEIDNAAING
                     IKVGLMGPLAGVGDPIFWGTVRPVFAALGAGLALKGELLGPILFFALFNIVRLAARYY
                     GVVYGYKKGLDVVQDMSGGLLQKLTEGASILGLFIMGALVQKWTSINVPLVLSTIQKQ
                     DGTIEVTTVQSILDSLMPGLLPLLLTFACMWLLRNRVNAIWIILGFFVIGILGAATGA
                     LA"
     gene            7858..8343
                     /locus_tag="PXE50_001471"
     CDS             7858..8343
                     /locus_tag="PXE50_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF986 domain-containing protein"
                     /protein_id="HDL5622383.1"
                     /translation="MTNTILILFILLGLVFAIYDQVFMHKLKGTTLLEIRLKKQKTID
                     TWLLIGLIVLSISYGVQNQIQPFTLYLLATCIILSVYLAFFRSPRLLLKQHGFFFANV
                     FFNYDKIYQVNIAEGKADEKILVIDLHSGRRLLAYVENAEDLQPVVDFFGGYKKESEQ
                     K"
     gene            complement(8429..9220)
                     /gene="tpiA"
                     /locus_tag="PXE50_001472"
     CDS             complement(8429..9220)
                     /gene="tpiA"
                     /locus_tag="PXE50_001472"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HDL5622384.1"
                     /translation="MARRPLVMGNWKLNGDKAFTKTLIADLKAELHGVEGCDVAIAPP
                     VMYLAHAEASLAGCGCGCSDKGLIALGSQNVDVNVKGAFTGDISPEMLKEFGAKYIII
                     GHSERRTYHKESDEFIAQKFKVLKDAGLVPVLCIGESEAENEAGKTEEVCARQIDAVI
                     NAHGVEAFNGAVIAYEPIWAIGTGKSATPAQAQAVHKFIRDHIAAKSQAVADQVIIQY
                     GGSVNDANAAELFTQPDIDGALVGGVSLKAPAFAVIVKAAAAAKA"
     gene            9380..10294
                     /locus_tag="PXE50_001473"
     CDS             9380..10294
                     /locus_tag="PXE50_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HDL5622385.1"
                     /translation="MKLNYLYSPPQAVGRLKAEYADFIVREELGYELAGEGEFVAVKI
                     RKTNASTLFVGEKLAKFVGISEREMSYAGLKDRHNRKIRVGSLAGNHFELLLRDVAES
                     EELIYRLQQLQAVGFPNYFTEQRFGRDGHNLTQALRWANGEISVKDRKKRSFYLSAAR
                     SEVFNLVVSQRINDCLTQKILENDYVQLAGSNSFFCVKSDEIAETQARLAQQDLLLTA
                     PLIGERSLELECNPAEKAIIEQHAQLVALMQKERMAAARRAMLCKPQNLEWQFEQEGL
                     RLKFFLDSGSYATALVRELILLTEESEA"
     gene            10465..11253
                     /gene="surE"
                     /locus_tag="PXE50_001474"
     CDS             10465..11253
                     /gene="surE"
                     /locus_tag="PXE50_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HDL5622386.1"
                     /translation="MRILISNDDGFHAVGIQTLAKALRDAGHIVTIIAPDRNRSAASS
                     CLTLVDPLRVHRFDEYNYAVIAGTPADCVHLALNGLFDGKFAEKFDLVVSGINHGANL
                     GDDVVYSGTVAAALEGRHLPLPSIAVSLVGRKHSSFLDGENHFGTAAQVVLDLLEKME
                     TQRFPSNHVLNVNVPNLPYSELKGTMITRLGERSPAAEIVKQKDPRNADVYWIGVTGE
                     PLDESFGTDFYALNRDCVSITPIQVDMTAHKTIATLKGIFNETV"
     gene            11240..11824
                     /locus_tag="PXE50_001475"
     CDS             11240..11824
                     /locus_tag="PXE50_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDL5622387.1"
                     /translation="MKLFETIYDKTMQWSKHRFAAFWLSFVSFIEAIFFPIPPDVMLI
                     PMSMAKPQNAFKYAVYTTLASVAGGVIGYFIGLYATDWVQGVIANWGMQANFDKAKLW
                     FETWGVAVVFLAGFSPIPYKVFTICAGVMQMAFFPFVITAAISRFARFILVAKLSAWG
                     GKKYEQKIRRSIELIGWGTIVLAVVAYIIYTLMK"
     gene            11842..12342
                     /locus_tag="PXE50_001476"
     CDS             11842..12342
                     /locus_tag="PXE50_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HDL5622388.1"
                     /translation="MKKSLFVLSLISFALVGCSSNSGESTSAVETTEANATWQSADSI
                     QTAPMPASMNQPIATQPTYQQPTYSAPQPISAAPAPMPVSSGSDSSQVETVGNCQVVR
                     DANNAPIYSQITKGCYTESHYTVGKSDTLYLIGYLTGTNANQIAQLNGLNTGSPLKVG
                     QVLRVR"
     gene            12355..12555
                     /locus_tag="PXE50_001477"
     CDS             12355..12555
                     /locus_tag="PXE50_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622389.1"
                     /translation="MNRTLLAFAISCAFLTACSSPTQPQVEDPNMLPAGTLQPIEGSG
                     ASQDSYSWPSDIQSTSMPDSMK"
     gene            12574..13854
                     /locus_tag="PXE50_001478"
     CDS             12574..13854
                     /locus_tag="PXE50_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDL5622390.1"
                     /translation="MKKQFILLPLVSAVLAACSSNNPAPVVNASGNNELSPGVMQPVD
                     VSAGAINSSGGWQSDIQSAPMPSSMNTTPVQTMPQPVSVPQPVATVPQPITNPVITEQ
                     PPQPTTTTKIVKKTKTVEKKVDQNFEIPRDANNAPMYNQIQKGFYDGSTYTVRKGDTM
                     FLIAYIVGKDVKEIAALNNMSEPYQLSVGQKLKTGKSATETITVEEKVTVPVEPQITY
                     QQGANGTTYASGGNITGPVKAGTANADVTPVNNGIKATTATAPAVTASVGTVNATEDR
                     TASTIRAIDGTASGAVQSSNTVSAPASSIKWQWPTSGRVISGFSSAEGGNKGIDIAGN
                     KGQDVRAAAAGKVVYAGNALQGYGNLIIIKHTDDFLSAYAHNNTIEVDEQETVKAGQK
                     IATLGSTGTNTNKLHFEIRYKGKSVDPARYLPRK"
     gene            14095..14286
                     /locus_tag="PXE50_001479"
     CDS             14095..14286
                     /locus_tag="PXE50_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622391.1"
                     /translation="MDPTEPSHRIYILLSEDRFQAEVFSTKLSESSMLLEAVKGGYIS
                     KDGKVRLLKKAEGWKIYYE"
     gene            14279..14845
                     /locus_tag="PXE50_001480"
     CDS             14279..14845
                     /locus_tag="PXE50_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HDL5622392.1"
                     /translation="MSETKIRCDWCKSSEIYMKYHDEEWGKPEFDSLKLFEKICLEGQ
                     QAGLSWITVLKKREAYRQAFHQFNPEKIAKMGEEEIDLLMQNTSLIHHRAKLEAIIKN
                     AKAYITMQQNGEDFSRFIWSFVNYQPQINDVPTLEAVPAHTETSKAMSKALKKRGFVF
                     VGETTCYAFMQSMGLVNDHLNNCVFKHK"
     gene            complement(14892..15122)
                     /gene="acpP"
                     /locus_tag="PXE50_001481"
     CDS             complement(14892..15122)
                     /gene="acpP"
                     /locus_tag="PXE50_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005725021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDL5622393.1"
                     /translation="MSIEERVKKIIVDQLGAKAEDVKPEASFIEDLGADSLDTVELVM
                     ALEEEFDIEIPDEEAEKITTVQSAIDYVQNNQ"
     gene            complement(15309..15986)
                     /gene="rpe"
                     /locus_tag="PXE50_001482"
     CDS             complement(15309..15986)
                     /gene="rpe"
                     /locus_tag="PXE50_001482"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HDL5622394.1"
                     /translation="MSKNPYLIAPSILSADLARLGDDVAEVLKAGADLIHFDVMDNHY
                     VPNLTFGPAICKALRDYGIQCPIDVHLMVKPVERLIPDFAKAGADYITFHPEATEHID
                     RNLQLIRDLGCKSGLVFNPATPLSYLDYVMDKVDVVLLMSVNPGFGGQSFIPSTLDKL
                     KEVRRRIDESGYNIRLEVDGGVKINNIADIAAAGADMFVAGSAIFDQPDYQAVIAQMR
                     DELRKVG"
BASE COUNT         4791 a         3240 c         3244 g         4797 t
ORIGIN      
        1 cctaaactct attttaattg ctattccacc tatttctgaa caacatagaa tcgttgaaaa
       61 aattgaaaaa ttattttcgg aaatagagaa attttagaaa aacttatatg tccaagggcg
      121 tgtgaaacac gccccttaaa aattaccaat caataatttt attcacaatt tcctgctgtt
      181 ctgtgcttgt ttttcgtaaa tagatccttg tggtttctat gctttcgtgc cccattaaat
      241 cagcaagaaa agcaatatca ttaaatcgtt ctaaaaaact ttttgcaaaa cgatggcgaa
      301 atgaatgtgg ataaacaatt ttaggatcta atttatagcg tctagcaaat acttttaatt
      361 ggctggcaat gccacgagta gtaattctat caccatattt atttaagaaa ataaatccat
      421 tatgcttatt atttaatctc aaccattcag aacactcttt ttgcagagat tttgggatgt
      481 aaattcgtct taattttcca cctttagaat agaggtctaa atagcctatt ttaatatgtt
      541 cacattttat ctggattaat tcacttactc tcgaacctgt tgctgccata aaacgaatca
      601 caaaatacca gtatagttcg ttatcttttt ttaggcattt tttaaaataa gtataatcag
      661 cttcactaat tacattttcc aaaaatggtt tttgttgaac tttaacaaag gataatttcc
      721 atttttcttt tttaataaat tccagataat aatttatggc tcttagcctt aaattaacag
      781 cctgaggctt atagttttca attaagaata ccttatatcg ctgtaaattg attttagata
      841 actgatcaaa ttttttgtga tattgtttta ccgcaaaaag ataagctgat tgggtatttt
      901 cagcaagatt agattgatta aggtgctttt caaatagatg gatcatatag gtttcctttt
      961 aggttggttg aaaaccgata tgataaaaga tcaataattt agtgactgta gggcgtatcc
     1021 aacacgccca agaaagcgat gatgactcct acaatttttc aatctctgca aataattgtt
     1081 caattttttg aacaatgcga tgttgttcgt ggattggtgg taaaggaaat aaataattga
     1141 taattttttc ctttgatata tttggttgcc cacttccctc actttttttc tgaaattctg
     1201 ctttctgcga catcaaataa taaaataaga atttattata aattccatta aaaggaatac
     1261 acgcacagca agcctgattt gttgttgctg ctatttttaa tatcccaagc ttaccaattg
     1321 tcgctccata cattgctatc aaaactgaac caacaggatt taatcttaca gaacattcct
     1381 gcaatgcttt atctgtaata aattcaggta tagatgaaat tattccgttg tttaagtctc
     1441 ctgtttttag ccacgggatc gtaccattat agtattcagg attgtgtcgg tttggagttg
     1501 cacctgaact ccaatcacct acttccccca acctcaccca agtccaattt tgaggaatct
     1561 caaatggcac ttcatcggcg atacaccgtt cctgacctgc tttgatctca taaggtaaat
     1621 tatcacgcat tacaatctct gaaacacttt ttggtttttt gagttttttc tcggcaataa
     1681 gacgattttt ctccgctttt atccgctcaa tcaggcaaga tgccagttca tcattcggat
     1741 cttgctcggt taatttaccc tgaatagctg cgtgtaacac cgattttttc agctgttcgg
     1801 ggaatgtatt gttgagttta gtgagttgct gttcggtttg ctcgtagcgt tcaacaagcg
     1861 gtaataattc ctcgattttt tgcacaatgc gctgttgttc taggagtggc ggaactggga
     1921 ctaaataaga ttctaattta gttaatgtta ttcttggaat acctgttcca gacatacttc
     1981 caatagaaat gttataaaaa taatgactat tcattacata atttaagtac tcattatcta
     2041 tttcttgtga ggtcttaatt aaggcaacac tggataacat actaaatggc tcattaagag
     2101 tatttataat acttactcca gttgtggctc catctttaat atatagaata tctccctttt
     2161 caggattaca acggctgaaa atttcattat gaatttcttt tgttacatag ctaatttttg
     2221 ataaatctaa tccatctttc tttatatttt tagctgtaat ataaagaaaa tcactcttat
     2281 cgatatttgg gggagaatga tgagttccat ctgtaatttt taggcatata tcccccaacc
     2341 tcacccacac ccaactctca ggaatctcaa aaggtggttc aatggtataa ggggctttat
     2401 ccgaagcagt atttctgtta taaccaaatc atctacttca ttccaataaa ctaaaaccca
     2461 ctatttcact aagtctttca tttgtgttat tgtgccgata catttttttg actacaaagg
     2521 atagatgatg aaactacaaa aacttatccg agaaaatcat ttagcattgc tgtttcaaca
     2581 agggaatttt gggcttgaga aagagagcca acgggttgat cgcaacggca atatcgttac
     2641 tactccccac cctgccgtat tcggtaatcg ctcttaccac ccttatattc aaaccgattt
     2701 tgccgaaagt cagctagagt taatcactcc cccgaatgct aaattagaag acagttttcg
     2761 ttggctctct gctattcacg aagtggtatt gcgttcgttg ccagaggagg aatatatctt
     2821 ccctctcagt atgccggcag gcttgccgcc ggaagagcaa attcaagaag cacaatttga
     2881 caaccctgaa gatgtgcaat atcgccaaca cctttccaaa aactatggga aatataagca
     2941 aatggtaagc ggcgtgcatt ataattttca actttcaacg gaatttgtcg aaaaagcctt
     3001 tgctttacaa acggaatata gcgagctgaa agccttccaa aacgcacttt atatgaagtt
     3061 agctaataac tttttgcgtt atcaatggat tttgctctat ttattggctg ccacgcctac
     3121 ggtggaatcg caatattttt atgaaaaatc accgcttgcg agagggcaac ttgtccgcag
     3181 cttgcgttca agcccttatg gttatgtgaa ttcggaaaaa gtggtggtta atcacgacag
     3241 cttagaaagc tatgttgaaa gccttgaagc caatgttgcc aacggattat taattgccga
     3301 aaaagaattc tattccaatg tgcgtttacg agggggcaaa aaagcccgtg agctattgga
     3361 aaacggtgtg aaatacgccg aattccgttt atttgattta aaccctttcg ccccttacgg
     3421 cattgagctg aatgatgcca aatttatcca ttatttctta ctcggtatgc tttggctgga
     3481 ggaaacaagc ggtcaaaaag aggtcgaaat cggcaaacag aaactttacc aagtcgcact
     3541 tgaagatcca agaacagaaa ccgctttccg tgccgaaggt gaagccattt taaatcaact
     3601 tttagcgatg cttgaagaat tatctgccgg tcaggaaagc ctagatttgg tgcgggaaaa
     3661 attagctcaa tttgctgatc caagcaaaac cctgaacgga cgtttaattg ccgcaataga
     3721 ggaagtcggc agttataaag cattgggggc taaattggct caaacctata aggcacaagc
     3781 ctttgagcgt ttttatgcgt tatcggcatt tgataatatg gaactttcca ctcaagccct
     3841 gttttttgat ttgatccaac aagggattga ggtggaagta ctggacgaaa acgatcaatt
     3901 cctcgcccta aaatttggcg atcatttgga atatgtgaaa aacggcaata tgaccagccg
     3961 agatcaatac atttcaccgc tgattatgga aaacaaagtg gtgacgaaaa aagtattggc
     4021 aaaagccggc tttaacgtgc cgaaaagcgt tgaatttacc aaccttgaac aggctgtggc
     4081 acattatccg ctatttgaag gcaaagcggt ggtgattaag ccgaaatcga ctaactatgg
     4141 tttagggatt accatcttcc aacaagcggt caaaaatcga gaagattttg caaaagcggt
     4201 tgaaattgcg ttccgtgaag acaaagaggt gatggtggaa gactatttag tcggtactga
     4261 ataccgcttc tttgtactgg gcgatgaaac ccttgcggtg ttactgcgtg taccggcgaa
     4321 tgtagtggga gatggcattc acagtgtaaa agagctggtg gagcgtaaaa atgacgatcc
     4381 gctacgtggc gatggctctc gtagcccgtt gaaaaaaatt gccttaggtg aaattgagca
     4441 gttacaactt aaagagcaag gcttaaccgt agattccgta ccggcgaaag gtcaaacagt
     4501 tcaactgcgt gccaattcca acatcagcac cggcggcgat tcgattgata tgaccgacca
     4561 aatgcacgaa agctatagac aaattgcagt gggaattgct caggcaatgg gggctaaagt
     4621 gtgtggggtg gatttgatca ttcctgatct caccaaacct gccgagccaa atttaagctc
     4681 ttggggcgtc attgaggcaa acttcaaccc aatgatgatg atgcacattt tcccttacca
     4741 aggcaaatcc cgccgtttaa ccaaagcggt aatcaaaatg ctgtttcctg agataggcaa
     4801 ttaaattttc tctctatacc tcttttaagg agaatttact caagaattct ccttaattta
     4861 tttctaaagt tttactccaa ttaaatttca ctttgtgcaa aacactccaa aagaagaatt
     4921 tttttgtata agtaaaaacg atcgaaaata tctccgttaa caaaatgtta taaagaaaag
     4981 acatttagcc caatttatag ccaaaaaagc ttattgtctg tgatatagat cacacttttg
     5041 taattaatac attgtgtgaa ataattatca tattaaaatc tcgccccagt aaataaacaa
     5101 cttaaaaaac cgcaaggagt aacaaatgag cattgctatt atcatagcaa cccatggtgt
     5161 tgctgcagag caacttctca aaacaactga gatgttgatt ggtgaacaag aagatgttgc
     5221 ttacattgac tttgttcccg gcgaaaatgc agaaacgatt atgggcaaat atcaagcatt
     5281 ggttgaaggt ccactatcac actgtgatca agtgctgttt ttggtggata tgtggggagg
     5341 aagcccattc aacgccgcaa accgattcca agatggaaaa tcgggtatgg atgttgttgc
     5401 gggtgtgaat attcctatgt tagtgaacac ctgtatggct cgtgatgatg tggagtcgtt
     5461 ggaagaattg gtggaagtcg cattagaagc cggctcaacc gggattcgtt cacttaatca
     5521 ccaacctgaa gtggctgagg tgcaaaccgc tactcctgca caagaaactg cagctgttca
     5581 acagcctgaa attgttgatg acggacgtcg tatgaccatt gcccttgccc gtattgatga
     5641 ccgcttgatt cacggtcaag ttgcgacggt ttggacaaaa gaaagtaaag tcaatcgcat
     5701 tattgtggta aacgaaggtg tagcaaaaga tagtgtacga actactatgc taaaaagtgt
     5761 tgctcctctt ggcgtaacgg ctcacgttgt tgatgtacct aaaatgattc gtgtctataa
     5821 caaccctgaa tatgccgatg atcgtgtaat gttactcttt accaacccaa gtgatgtctt
     5881 agccttaatt gaaggcggtg taccactcaa tagcattaac gtgggcggta tttcgcataa
     5941 agaagggaaa caaatggtta gccattctgt ggcggttgat caaaatgata ttgatgcctt
     6001 caaagcaatt gatgcgaaag gcgttgaatt agaagtacgc aaagtctcaa gcgatagccg
     6061 tcagtatatg atggatttat tgaaaaaaca taacttaatc taaaggaaat tactatggaa
     6121 ctttcagcat tacaaattgt gcttttattc ctcgttgcct gtatctcagg tatgggctca
     6181 attcttgatg aatggcaaac ccaccgtccg ttaattgcct gtacgatgat aggcttagtg
     6241 cttggtgatg tgactaccgg cgttattgtt ggtggctcat tagagttatt agctttaggt
     6301 tggatgaaca tcggtgccgc tgttgcacca gatgcggcat tagcctctat tgtctcaacc
     6361 attttagtca ttgtaggtcg tcaagatatt tcaactggta tcgccatcgc tattccgctt
     6421 gcagctgccg gtcaagtatt aacctatgtt gtgcgtgcaa tcaccgtagg tttccaacac
     6481 gcagcagata aatcaattga agacggtaac ttaagccgtt tagactggtt acatcgtggt
     6541 gctttattgc ttcaagcaat gcgtattgcc attccggcat taattgtggc attaacagca
     6601 ggtacagatg cggttcaaac aatgttaaat gccattcctg aagtggttac aaccgggctg
     6661 aaaattgccg gtggcttcat cgccgtggtg ggttatgcga tggtgatcaa tatgatgcgt
     6721 gcaggtcatt taatgccgtt cttcttcgca ggctttgtaa ttgcaggctt taccgatttc
     6781 aatcttgttg cccttggggt attaggtacg gttattgcaa tggtttatat ccatatgcac
     6841 cctaaatata acaaaagcca acaggtagtg gtggcagctg caccaaaaaa tgatttagac
     6901 aaccgtttag actaagaggg catttaaaat gacaactgaa atcaaaaaag taacaaaaag
     6961 cgatttgaat gccgttgtac gtcgttcaaa cttattccaa ggttcgtgga actttgagcg
     7021 tatgcaggct cttggttttg cgtatgcgat ggtaccggtt atcaaacgtt tatatccgga
     7081 tccaaatggc ccgggtcgca aagaagcaat taaacgccat tctgagttct ttaacaccca
     7141 gccattcgtc ggtgcaccga ttttaggggt aaccattgct atggaagaag aacgtgccaa
     7201 cggtaaagaa atcgacaatg ccgcaattaa cggtattaaa gttggtttaa tgggaccatt
     7261 agccggtgtg ggtgacccaa ttttctgggg aactgttcgc cctgtatttg ccgcattagg
     7321 agcaggctta gccttaaaag gtgagctttt aggcccaatc ctgtttttcg ccttatttaa
     7381 catagtgcgt ttagccgcac gctattatgg cgtagtgtat ggctataaaa aagggttaga
     7441 tgttgtacaa gatatgagcg gcggtttatt gcaaaaatta accgaaggtg cttcaatctt
     7501 aggtctgttt attatggggg cattggtaca aaaatggacg agcattaacg ttccgcttgt
     7561 gctttcaacc attcaaaaac aagacggtac catcgaagtt accacagtgc aaagcattct
     7621 cgacagctta atgccgggcc tactcccatt attattaacc tttgcttgta tgtggttact
     7681 tcgtaatcga gtaaatgcta tctggattat cctcggtttc tttgttatcg gtatcctcgg
     7741 cgctgcaacc ggtgcattag cttaattgca aaattttctg tgaaaacgac cgcttgaact
     7801 tgaacattca agcggttttt tatacgcttt agcccaaata aattcacttg cttaattatg
     7861 accaatacca tccttattct ctttatttta cttggcttag tattcgccat ttatgaccaa
     7921 gtttttatgc acaaactcaa aggcacaacc ttactggaaa tccgtttaaa aaagcaaaaa
     7981 acaattgata cttggttatt gattggttta atcgtcttgt caattagcta tggcgtacaa
     8041 aatcaaatcc agccttttac actttacctg ctggcgactt gcattattct gtcggtctat
     8101 ctcgcctttt tccgttcccc tcgcttgttg ttaaaacagc acggtttttt ctttgcgaat
     8161 gtctttttta attacgacaa gatttatcaa gtcaatattg cagaaggaaa agcagacgaa
     8221 aaaattttgg taattgattt acatagcgga agaaggctgc ttgcctatgt tgaaaatgcg
     8281 gaagatcttc aaccggtagt ggattttttt ggcggttata aaaaggaaag tgagcagaaa
     8341 tagtttgcga acaaaacaca agcggtcatt tttccctgaa attttgcaaa aaactgagga
     8401 aaaatgaccg cttgtaaaat cggttaaatt aggctttagc agccgctgcc gctttaacga
     8461 tcaccgcaaa agcaggcgct ttaagtgaaa caccgcctac taatgcaccg tcaatatccg
     8521 gttgagtgaa taactctgct gcattggcat cgtttacaga gccaccgtat tgaatgatca
     8581 cttggtcagc cactgcttgc gatttagctg caatatggtc acgaataaat ttatgcactg
     8641 cttgtgcttg tgccggagtc gctgatttgc cggtaccgat tgcccaaatt ggttcgtaag
     8701 caataactgc accgttgaat gcttccacac cgtgcgcgtt gatgaccgca tcaatttgtc
     8761 ttgcacacac ttcttcagtt ttacctgctt cattttcggc ttcagattca ccgatacata
     8821 atacaggcac taagccggca tcttttaata ctttgaattt ttgagcaata aattcatcgc
     8881 tttctttgtg gtaagtacgg cgttctgaat gcccgataat aatatatttt gccccaaact
     8941 cttttaacat ttcaggtgaa atatcaccgg tgaatgcccc ttttacgttc acatcaacgt
     9001 tttgtgaacc aagtgcgatt aagcctttat cactgcaacc acagccacaa ccggcaagtg
     9061 atgcttcagc gtgtgccaaa tacatcaccg gtggagcgat tgctacatca cagccttcaa
     9121 cgccatgtaa ttctgctttt aaatctgcaa ttaaggtttt agtaaacgct ttatcaccgt
     9181 ttaatttcca gttacccatt acaagtggac gacgtgccat tttgtttctc ctatatgaag
     9241 ttgaacttaa atataaacgt tgcaaactat accaaatttt aatgtcgttt tgttgttttt
     9301 attttgcttt ttctgatcta gatcgaaagg tttaacgtat aatgccgaaa tcttattttt
     9361 tatgttattc gagaagtgaa tgaaactgaa ttatttatac tctcctcctc aagctgttgg
     9421 gcgactaaaa gccgaatatg cagactttat tgtgcgtgaa gaactgggct acgaactagc
     9481 cggcgaaggg gaatttgtgg cggttaaaat ccgcaaaacc aacgccagca cgctgtttgt
     9541 gggggaaaag ttagccaaat ttgtcggtat ttccgagcgt gaaatgagtt atgcaggctt
     9601 aaaggaccgc cacaaccgca aaattcgtgt tggttcgctc gccggcaatc attttgaatt
     9661 attgctacgt gatgtagcag aaagcgaaga gttgatttac cgtttgcaac agttgcaagc
     9721 ggtcggattt cccaattatt ttaccgaaca acgtttcggg cgagacggac ataacctgac
     9781 tcaagccttg cgttgggcaa acggggaaat tagcgtgaaa gatcgcaaaa aacgcagttt
     9841 ctacctttcc gctgcccgct cggaagtgtt taatttagtg gtttcacagc ggattaatga
     9901 ctgcttaacc caaaaaatct tggagaatga ttacgttcaa cttgccggct ctaacagctt
     9961 tttctgcgtg aaatcggacg aaattgctga aactcaagcc cgtttagcac agcaagatct
    10021 acttctcacc gctccgctga taggcgaaag atcgcttgaa ttagaatgca atcctgctga
    10081 aaaagccatc atagagcaac acgctcaatt ggttgcctta atgcaaaaag agcgtatggc
    10141 agccgctcgg cgagcaatgc tttgtaagcc acaaaatctg gaatggcaat ttgaacaaga
    10201 agggctacgg ttaaaattct ttttagattc aggcagttat gccactgcac tggtgcgaga
    10261 gttaattctg cttaccgaag agagcgaagc ttagtccata acacataaca agcggtaaga
    10321 ttttaatcat tttttgcaat ttgcaaaact ttaacaaaat cttaccgctt tttgcacttt
    10381 tagactaaaa aaactgtcga aaaattgtta gaattgcgat ctttgtattt agagtctatc
    10441 aagatgtaag atctaaagga aattatgcga attttaatta gtaatgacga tggttttcac
    10501 gctgtcggca ttcaaacttt agccaaagcc ttgcgagatg caggccatat cgtcaccatt
    10561 attgcaccgg atcgtaaccg cagtgcagct tcaagctgcc taaccttagt agatccactt
    10621 cgggtgcatc gttttgatga atataattat gcggtgatcg ccggcacacc tgccgattgc
    10681 gtgcatttag ccttaaacgg cttgtttgac ggcaaatttg cagaaaaatt tgatttggtg
    10741 gtctccggca ttaatcacgg ggcaaattta ggcgatgatg tggtttactc cggtacggta
    10801 gcggcagcat tggaaggccg ccacttgcca ttaccaagta ttgcagtatc actggttggg
    10861 cgtaaacact cttcgttttt agacggtgaa aatcattttg gaacggcagc acaggtagtg
    10921 ttagatttat tggaaaaaat ggaaacgcaa cgttttccat caaaccacgt tctcaatgtt
    10981 aatgtgccga atttacctta ttcagagcta aaaggcacaa tgatcacccg cttaggtgaa
    11041 cgttcacccg ctgcggaaat tgtgaagcaa aaagatcctc gtaatgctga tgtctattgg
    11101 attggtgtaa caggtgaacc actggatgaa agttttggta ctgattttta tgcattaaac
    11161 cgagattgcg tttctatcac accaattcaa gtggatatga ccgctcataa aacgatagca
    11221 accttaaaag gcatttttaa tgaaactgtt tgaaacaatt tatgacaaaa caatgcagtg
    11281 gtctaagcac cgcttcgctg ccttttggtt gagttttgtc agttttatcg aggcgatctt
    11341 tttcccgatt ccgccggatg tgatgttgat tccgatgtcg atggcaaaac cgcaaaatgc
    11401 gtttaaatat gcagtttaca ctacccttgc ttcggttgcc ggtggtgtta ttggttattt
    11461 tattggctta tatgctaccg attgggtgca aggcgtcatc gcaaattggg gaatgcaagc
    11521 aaactttgat aaagcaaaat tgtggtttga aacttggggt gtcgcggtag tatttttagc
    11581 cggtttttcg ccgattccct ataaggtatt taccatctgt gccggtgtaa tgcagatggc
    11641 gttcttcccg tttgtgatta ctgctgcgat ttctcgcttt gcccgtttta ttttggtagc
    11701 aaaactctct gcttggggtg gcaaaaaata tgaacaaaaa attcgccgct caattgaatt
    11761 aattggttgg ggaacaatcg ttttagccgt tgttgcctat ataatttata cattaatgaa
    11821 ataaatttta aggatataaa aatgaaaaaa tcactttttg ttttatctct gatttctttt
    11881 gctttagtgg gttgttcaag caattcgggt gaatccactt ctgcggtaga aacaacagaa
    11941 gcaaatgcaa cttggcaatc agcagatagc attcaaactg caccaatgcc tgcctcgatg
    12001 aatcaaccta ttgccactca gccaacctat cagcagccga cttactctgc accacaacca
    12061 atttcggcag caccagcacc aatgcctgtt tcaagtggta gtgatagctc tcaagttgaa
    12121 acagtaggga actgccaagt ggtgcgtgat gcgaataatg ctcctatcta ttcacaaatt
    12181 accaaaggct gctacacaga aagtcactat acggtaggta aaagtgatac gctttattta
    12241 atcggttatc taaccggcac caatgccaat caaattgcgc agctaaatgg tttaaatacc
    12301 ggctctccac tgaaagtcgg gcaagtctta cgtgttcgtt aataggcaga gaaaatgaac
    12361 agaacccttt tagcatttgc aatttcttgt gcatttttga ccgcttgtag ctcgcctact
    12421 cagccacaag ttgaagatcc aaatatgtta cctgcaggca cattacaacc gattgaaggc
    12481 tcaggcgcaa gccaagacag ttacagttgg ccgtctgata ttcaatcaac gtcaatgcct
    12541 gacagtatga aataatttta ggacaatcat ttaatgaaaa aacaatttat tcttctccct
    12601 ttagtctctg ctgttttggc agcctgttct tcaaacaatc cagcaccggt ggtgaatgct
    12661 tccggtaata acgaattaag cccgggcgtg atgcagcctg ttgatgtgag tgcaggtgca
    12721 attaattcaa gcggtggctg gcagtctgat attcaatctg caccaatgcc aagctcgatg
    12781 aataccactc cggtgcaaac aatgccccag ccggtttcag tgccacaacc tgtggcgact
    12841 gtaccgcagc caattaccaa tccggtgatt accgaacaac caccacagcc gacaaccacg
    12901 accaaaatcg tgaaaaaaac gaaaacggtc gagaaaaaag tggatcaaaa ttttgagatc
    12961 ccgcgtgatg ccaacaatgc cccaatgtac aaccaaattc aaaaagggtt ctacgatggc
    13021 tctacctata ccgtacgcaa aggcgacaca atgtttttga ttgcctatat tgtgggtaaa
    13081 gatgtaaaag aaatcgccgc tcttaataat atgagcgaac cttaccaatt aagcgtaggg
    13141 caaaaactca aaaccggcaa atctgcaacg gaaactatta ccgtggaaga aaaagtcacc
    13201 gtaccggttg aaccacaaat tacctaccaa caaggtgcaa acggcacaac ctatgcttct
    13261 ggcggtaata ttactgggcc ggtaaaagca ggcacagcca acgctgatgt cacgccggtt
    13321 aataacggta ttaaagcaac aactgcaact gctccggcag taactgcttc tgtcggtaca
    13381 gtaaatgcaa cagaggaccg taccgcctcc accattcgtg ctatagatgg cacagcaagt
    13441 ggtgccgtac aaagtagtaa tactgtttct gcaccagctt catcaattaa atggcaatgg
    13501 ccaaccagcg ggcgtgtaat ttcaggcttc tcctcagcag aaggaggtaa taaaggcatt
    13561 gatattgccg gcaataaagg acaagatgta cgtgctgccg ccgcaggtaa agtggtatat
    13621 gccggtaatg ccttgcaggg ttacggtaac ttaatcatca tcaaacatac cgatgatttc
    13681 ttaagtgctt atgcacacaa caatactatt gaagttgatg agcaagaaac ggtgaaagcc
    13741 ggtcagaaaa tcgcgacttt aggtagtaca ggaaccaata cgaataaatt acattttgaa
    13801 attcgttaca aaggaaaatc tgtcgatccg gctcgttatt taccaagaaa ataagagtaa
    13861 ctttttagca taatccgacc gcttgtgtac tacaagcggt caatttttag gaaaattatg
    13921 caaatgaaaa aatatatcgc acacatgata agttcgttac tgctgatagt ttgttcggac
    13981 taccgagcaa caccaactag cccaagcgat gcttacactt gctctccttc ttttcgctac
    14041 tctttcttaa aaaaaacgtg cataccttta ttcagtatag ccgacattca attattggat
    14101 ccaaccgagc cttcacatcg catttatatt ttgttatctg aagatcgatt tcaagccgaa
    14161 gtcttctcaa cgaagctctc tgaatcttct atgttattgg aggcggttaa aggaggctat
    14221 atttcaaaag acggaaaagt tcgtttactc aaaaaagctg aaggttggaa aatttactat
    14281 gagtgagact aaaatacgtt gtgattggtg taaaagcagt gaaatttata tgaaatatca
    14341 cgacgaagaa tggggaaaac cggagtttga cagcctcaaa ctgtttgaga aaatctgcct
    14401 tgaagggcaa caagccggac tttcttggat tacggtgttg aaaaaacggg aagcctaccg
    14461 ccaagcattc catcagttta atcctgaaaa aattgccaaa atgggtgaag aagaaattga
    14521 tttgttaatg caaaacacta gcttaatcca ccaccgagca aagttagaag ccattataaa
    14581 aaatgcgaaa gcttatatca caatgcagca aaatggcgaa gacttcagtc ggtttatttg
    14641 gtcttttgtg aattatcagc cgcaaattaa tgatgtacca acacttgaag ctgttcctgc
    14701 tcatacagaa acctcaaaag caatgtcaaa agcgttgaaa aaacgtgggt ttgtgtttgt
    14761 aggcgagact acttgctatg cttttatgca gtcaatgggg ctggttaatg accatttgaa
    14821 taattgcgtg ttcaaacata aataaacaca aaaaattagg cgaccatttg gtcgcctaac
    14881 attaattcag attattgatt gttttgaacg taatcaattg ctgattgaac tgtagtaatt
    14941 ttttcagctt cttcatctgg aatttcgata tcgaattctt cttctaaagc cattactaat
    15001 tcaacagtgt ctaaagaatc tgcacctaaa tcttcaatga atgaagcttc tggttttaca
    15061 tcttctgctt tcgcgccaag ttgatcaaca atgatttttt ttacgcgttc ttcaatgctc
    15121 attttgtttt tcctatagtg aatatcgcat aagtgcgaga gttaaatagt gtaatcgaaa
    15181 taagtttaaa tacaaccttt tataaaaagg tcaaaccaga ctattcctat acaccagaat
    15241 atatctgttt ttccattcta tcattatgtt tgtgtttaat ctatagagat aaatcaaatt
    15301 tcatttgatt accctacttt ccgtaattca tctcgcattt gtgcaatcac tgcttgataa
    15361 tctggctggt caaaaatcgc agaacctgcc acaaacatat ctgctcctgc ggctgcaatg
    15421 tcggcaatgt tatttatttt cacaccacca tcaacctcta agcgaatgtt ataaccgctc
    15481 tcatcaatac gacgacggac ttctttcaat ttatctaagg tggacggaat aaatgattgt
    15541 ccgccaaagc ccggattcac agacatcaat aaaaccacgt caactttatc catcacataa
    15601 tctaaatagc tcaatggcgt tgccgggtta aacaccaagc ctgatttaca acctaaatca
    15661 cggataagct gtaaatttcg atctatatgt tccgttgctt cagggtggaa tgtaatataa
    15721 tccgctccgg ctttggcaaa atccggaatc aaacgctcaa ccggttttac cattaaatgc
    15781 acatcaatcg ggcattgaat gccgtaatca cgtaaggctt tgcagatcgc cggcccgaag
    15841 gtcaaattcg gcacgtagtg gttgtccatt acatcaaagt gaattaagtc tgcaccggct
    15901 tttaacacct ctgccacatc atcacccaag cgagctaaat cggcagataa aatagacggt
    15961 gcaattaaat aaggattctt actcatattt cctcactatc aaaaaataaa tctacgttag
    16021 attaccataa ttttaacagc gaaaagagtc tctcttccta aaaatccgtt tt
//
LOCUS       DANLZQ010000054        16023 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.054, whole genome shotgun sequence.
ACCESSION   DANLZQ010000054 DANLZQ010000000
VERSION     DANLZQ010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16023)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16023)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16023
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.054"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            133..687
                     /gene="pilW"
                     /locus_tag="PXE50_001483"
     CDS             133..687
                     /gene="pilW"
                     /locus_tag="PXE50_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis/stability protein PilW"
                     /protein_id="HDL5622395.1"
                     /translation="MFAKFFPKMTACILIFLLAACSSLPPSSSEVEFNRSEAVKARIN
                     LALAYLEQNDFPKAKQNIDKALAHDEKDYLPYSVLAYYYQQTGDAENAEKAYQTALKL
                     SQNRPDVLNNYGTFLCKQGQFQQAYQQFEQAVKSKAPYYHQADSLENMVLCAKKEPNL
                     QKIAETLTELEKLDKPRANLLKEN"
     gene            687..3011
                     /locus_tag="PXE50_001484"
     CDS             687..3011
                     /locus_tag="PXE50_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HDL5622396.1"
                     /translation="MTDLNLKISQIIAGELNVGSHQILAAITLLGEGNTIPFIARYRK
                     EVTGGLDDTQLRHFETRLIYLREMDERRQTILKSIEEQGKLTDELKAKILSSESKTEL
                     EDLYLPYKPKRRTRGQIAIEAGLEPLADSLWNDPKQDPETLAANFVDAEKGVADTKAA
                     LDGARYILMERFSEDAELLAKLRQYLTAYATLESKVIDGKEEEGEKFRDYFAHSEPFN
                     SVPSHRALAMFRGRNEGVLSLSLNADPTAEEGTKSSHCEEIIREHLGVIFNNQPADKW
                     REQVIAWTWKIKAALHLETELMATLCEKAEEEAIDVFARNLSALLMAAPAGARNTMGL
                     DPGLRTGVKVAVVDNTGKLLDTATIYPHTGREAEAQLAIFSLIKQHNVELIAIGNGTA
                     SRETERFAKAVIKEIKENKPQTVVVSEAGASVYSASEFAANEFPNLDVSLRGAVSIAR
                     RLQDPLAELVKIEPKAIGVGQYQHDVNQSQLARKLDAVVEDCVNAVGVDLNTASAPLL
                     ARVAGMTKTLAQNIVAFRDENGRFTSRSELKKVPRLGPKAFEQCAGFMRIIGGKNALD
                     ASSVHPEAYPVVEKILQATTSTLAELMGNNSKIHSLNAKDFVDEQFGLPTVNDIFKEL
                     EKPGRDPRGEFKTAVFMDGVEEITDLKAGMILEGTVTNVANFGAFVDIGVHQDGLVHI
                     SMLSNSFVEDPHTVVKAGDVVKVKVLEVDAARKRIALTMRLDDKPTDKKEPTSGRNSA
                     EICKNTQKNDRLQSNNRNAFGNNAFADALKGWKK"
     gene            complement(3082..3645)
                     /locus_tag="PXE50_001485"
     CDS             complement(3082..3645)
                     /locus_tag="PXE50_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HDL5622397.1"
                     /translation="MQILDLLHHRRSNKKFGDKAPNAEQLEQILKAGLRVPDHGRLKP
                     YRFVVIEKSGMPQFGECLKSAVAEFDMGEERLKKAEKLANQAPMIIGVVATLDDSIAK
                     VPSWEQMITAGCATYAIQLAANAQGFDTVWITNKWINGSALRSAFGCQESDKIIALIM
                     LGSPAEGEQIALAPESESLEGFVRYLK"
     gene            3748..5604
                     /gene="sppA"
                     /locus_tag="PXE50_001486"
     CDS             3748..5604
                     /gene="sppA"
                     /locus_tag="PXE50_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HDL5622398.1"
                     /translation="MLTILKAFYRIFRCIRECVINLFFILFILLLVPVVAFISSSGST
                     QKPVFNQGALRLNLDGYLADNREEFTDFYRLVQSELGSSEPFKISTFDVVQAISHAKN
                     DPKITGLVLDLQKLQSADFSSLDFIGNEINNFKQSGKPVIAVGEDYSQKQYYLASFAD
                     EIYLNKVGAVDLKGLNYSNTYFKTLLDKIEAEPHIFRVGTYKSAVEPFMRDDMSEEAK
                     QNARGWLNGTWQQTVATLAQNRNIEPQALDLSPANYIEKYKQAKGDDAQLALNQKWVS
                     QLVSSQESRDKLIAQFGKNSEGSYNQIEFLDYMTELNDRFAEVNAPKIAVVNVEGAIA
                     GGESDEMNVGSETLVKLLQQARDDKNVEGLILRINSPGGSAVASELIRQEVEAFQQAG
                     KPVVASMGGMAASGGYWIAATSDKIIASPNTLTGSIGIFGLAVTFEKTAKNLGVSEDG
                     IATSALAQQAGLKSLPQEQAEVLQIGIENGYDRFLELVSRGRKMPKEVVDKVAQGQVW
                     LGTDALKHGLVDELGNFNVAYNALSELINQKREAENQPKVEQFGLQWFAEQDDSLFGT
                     LARDFKAQLQFSVANWLDLPLLKQPQQQLETLSRFNDPKQMYLYCLNCGKID"
     gene            complement(5645..5821)
                     /locus_tag="PXE50_001487"
     CDS             complement(5645..5821)
                     /locus_tag="PXE50_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HDL5622399.1"
                     /translation="MQVNQYQFGVAENKGRVQGSLGLSAGNGNHRLGLEASVASGKKL
                     KQPFNVLVNYRYQW"
     gene            complement(5829..6038)
                     /locus_tag="PXE50_001488"
     CDS             complement(5829..6038)
                     /locus_tag="PXE50_001488"
                     /inference="COORDINATES: protein motif:HMM:NF015737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HDL5622400.1"
                     /translation="MESLVLNNDWVVTPQAQLAYHTINGKADEERLNLLVARAGVRVA
                     KGFALNNGWNLQPYAEVNGIAEKGQ"
     gene            complement(6077..7249)
                     /gene="cytX"
                     /locus_tag="PXE50_001489"
     CDS             complement(6077..7249)
                     /gene="cytX"
                     /locus_tag="PXE50_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative hydroxymethylpyrimidine transporter
                     CytX"
                     /protein_id="HDL5622401.1"
                     /translation="MNRTLSTLNSGLIWAGAGISASAIVVGTWIAPLGWQQGLLAIVL
                     GHLLGGILFFAAGLIGAKTGKNAMQTVQISFGRGSVFFSLANVLQLVGWTAIMIYTGA
                     EISNALSLALWEYSAFSLWAIVLGLLIVLWLFTGSNQVGKFKLVTLIAMFLLTLWLSI
                     KVLNGQENFPVSGEMPFSTAVELATIMPLSWLPLVSDYTAKAKKPFAATLSATIGYLI
                     TSAWMYALGLGMVLFTGQTEIAPMLLMTGMSLIGIMVMILSTVTTTFLDAYSAGVSAG
                     NITAKFKETPTAILVTIIGTLLAISLPVTQYENFLLLIGSVFAPMIAVQIADFFVLKR
                     HQAQPNVDWVAAGLWLVGFVLYHLLSYHQVHLLLGLTIPVMLVIFLSTIFVRRFTK"
     gene            complement(7242..8771)
                     /gene="thiE"
                     /locus_tag="PXE50_001490"
     CDS             complement(7242..8771)
                     /gene="thiE"
                     /locus_tag="PXE50_001490"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HDL5622402.1"
                     /translation="MSNYSNSPYQPNVIWTVAGSDSCAGAGLQTDLHTFHDFNLVGCS
                     VVTSVTAQHPHGVLCVTPVDDHTFRQQFEALLVQGYPNAIKIGLLCSQAQVEILCEYI
                     QKIRAESSHYCYVVYDPVAVASSGQALSDSILLQIVQQKLYPLVDLITPNGTELALLS
                     DTEIQTFGDVKTASHKLFAQGIKAVLAKGGHFEWLGETVRDYLLTANEIYAFSHARQQ
                     SVNTHGTGCTYASAVGAMLATGFDLADAVTVATAYLQKGLSEKQGRGQTALSSLCHTG
                     YPDDIAFFPQTELISAPLKLPKEPFAPTEYQLGLYPVVDSVKWLERLILVGVKTLQIR
                     IKNRPLAEIEQEIAHSVALAKQHNVRLFVNDYWQLAMKYQAYGVHLGQEDLATADLNA
                     IQQSGLRLGVSTHCYFEIMRALAVKPSYIAFGHVFPTQTKVMPSQPQGLTNLAKYVAL
                     VAPLNIPTVAIGGINEQSIENVMHTGVGSAAVVSAVTQAKDWQQAVKNLAKFANGGRN
                     E"
     regulatory      complement(8839..8935)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(9071..10384)
                     /locus_tag="PXE50_001491"
     CDS             complement(9071..10384)
                     /locus_tag="PXE50_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5622403.1"
                     /translation="MSKTHSNPTKVAVASMVGTAIEYFDNYIYTMAAVLVFNVQFFNS
                     DDPVSNQLMSLSVLALAFFTRPMGSILFGHFGDKYGRKQTLIASLLLMGLSTVAIGLL
                     PNYAAIGIWATVLLCLCRIGQGLGLGGEWGGAALVATEHAPKHKRAFFGIFPQMGAPI
                     GLLLANGAFYLVNLIYGEQTFLDWAWRIPFVASIVMIAIGLYIRIKISESPIFLKAEQ
                     QGKNRHTPLKTLFSQHLKPFMIGVLIATAGYVLFYILVAFTPIFVKSPVAVSQAGHAT
                     GLGLPVNLYTQYLLITSVIFGIAIFFSGIYSDKIGRRLLLLLATGATVVYGLTMPFFL
                     ENGTPTSIFIFLTIGMILIGLSFGPMAVILPELFPTEVRYTGASLAYTAAGILGASVF
                     TIIAVKINENFGLFGVGGYLSVASLLSFWALWQVHETKDLELEEI"
     gene            complement(10377..11195)
                     /gene="thiM"
                     /locus_tag="PXE50_001492"
     CDS             complement(10377..11195)
                     /gene="thiM"
                     /locus_tag="PXE50_001492"
                     /EC_number="2.7.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyethylthiazole kinase"
                     /protein_id="HDL5622404.1"
                     /translation="MTTSLPYHSHYLQKIRQNRPLVHNITNIVAANFSANGLLALGAS
                     PIMAAAIEEMESVPALSNAVVINIGTLIGKEVEAMELAGKTANRLGIPLILDPVGVGA
                     TPFRRQTVETLVDQIHFTAIRGNAGELATLAGVEWQAKGVDAGEGSHNVVEIAQQIAK
                     RYQTLVAISGETDVVSSGSHTALLHNGSPMFPKITASGCLLSAVCGAFLAVADKEHYF
                     NALIEACAAYAVAGEVAAQALKPTQYGQFAVNLLDTLGALTPETVEQYVRVEYV"
     regulatory      complement(11252..11348)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(11405..13186)
                     /gene="nrdD"
                     /locus_tag="PXE50_001493"
     CDS             complement(11405..13186)
                     /gene="nrdD"
                     /locus_tag="PXE50_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005611280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase"
                     /protein_id="HDL5622405.1"
                     /translation="MIRLQPTQLDGKLHFINQYIQAKNAADGSKMDANANVTQKNIAT
                     MEQELMKDFFVQINRAKVSEKIAKIFGKETACEYLRQIEAHEIYVHDETSLKPYCVSV
                     TMYPFLRDGLTKLGGESKAPKHLASFCGSFINFVFAVSSQFAGAVATVEFLTYFDYFA
                     RKDYGDNYLQTHRSDIENHLQQVVYSINQPAAARGYQSVFWNISVYDKFYFEAMFSRF
                     VFPDFEKPNWETTSKLQLFFMQWFNKERSKAILTFPVVTAAMLTEKGKCKDDEFANQM
                     AKELSQGNSFFIYQSDNPDSLASCCRLRNEISDHSFSYSLGAGGVATGSINVITINMN
                     RLVQDNRDLSEEVSKIHKYQYAYRKLMEEYLAAGMLPVYDAGFISLHKQFLTIGINGM
                     AEAAESQGLTVGYNPDYIDFVQSRLKIIFQANQAAGEKYGVKFNTEFVPAENLGVKNA
                     KWDKEDGYFVPRDCYNSYFYVVEDEEINALDKFLLHGRELIEWLDGGSALHLNLDEAL
                     TQTGYRSLLDTAAKTGCNYFCINVKITICNECSHIDKRTLHSCSKCGSDNIDYGTRVI
                     GYLKRVSAFSSARQKEHSLRFYHREAA"
     gene            complement(13183..13656)
                     /gene="nrdG"
                     /locus_tag="PXE50_001494"
     CDS             complement(13183..13656)
                     /gene="nrdG"
                     /locus_tag="PXE50_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase
                     activating protein"
                     /protein_id="HDL5622406.1"
                     /translation="MENLRFSSEQIVWQEVPNETSLAFLITGCPLGCKGCHSADSWKA
                     CLGKELSSEYLSERLKRYQGLISCVLFMGGEWEAEKLLPLLQLAKNQGLNTCLYSGLE
                     QHEIAETLLHELTYLKTGRWIAERGGLESLTTNQRFTDLRNNQNLNHLFIRGASI"
     gene            complement(13869..14087)
                     /gene="ilvM"
                     /locus_tag="PXE50_001495"
     CDS             complement(13869..14087)
                     /gene="ilvM"
                     /locus_tag="PXE50_001495"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 2 small subunit"
                     /protein_id="HDL5622407.1"
                     /translation="MEEYQLTLKANKRPETLERILRVIRHRGFEVKCLNVESTDSAFN
                     LNFTLASKRPLSLLSHQLEKLFDIIEIN"
     gene            complement(14097..15749)
                     /locus_tag="PXE50_001496"
     CDS             complement(14097..15749)
                     /locus_tag="PXE50_001496"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 2 catalytic subunit"
                     /protein_id="HDL5622408.1"
                     /translation="MNGARFITESLKAHGVTTLFGYPGGAIMPTYDAIYDSGLDHLLC
                     RNEQGAAMAAIGYARATGKVGVCIATSGPGATNLITGLGDAALDSIPVVAITGQVASH
                     LIGTDAFQEADVLGLSLACTKHSFIVQNIEELPEILALAFQIAQSGRPGPVLVDIPRD
                     VQLAQTSALPIVYPKEPADAQDPNKLVVAKQLLATAKRPVLYVGGGVSMADGVQAVRN
                     FVKIANIPSVSTLKGLGTIDPTDPLYMGMIGMHGTKAANYAVQECDLLIACGARFDDR
                     VTGKLDTFAPHAKVIHIDIDNAEINKLRQAQVALKGNLIEAVNYLAQPLDIEPWREDV
                     RNLKQQFDFQYQENSGDGNIDAVALLHTLSQRKAKNSIVTTDVGQHQMWSAQHLTYHD
                     PKNYITSAGFGSMGFGLPAAIGAIKARAEDQVILITGDGSIMMNIQELGTLKRADLAV
                     KILLLDNQRLGMVRQWQSLFFHGRHSQTILDDNPDFVLLAKAFDIDGERIEKASEVSD
                     AIDRMFNAKGAYLLHVCIPQEDNVWPLVPPGACNADMLDDEV"
BASE COUNT         4595 a         3451 c         3594 g         4383 t
ORIGIN      
        1 acaacacccc attattattt ttgcgatctg cgtcgaaaaa tgaaaacgaa aaatttttct
       61 tcttcgcaaa aaatcgctag tcttagcgag gatggaacag taaaattaag ccctttgttg
      121 taggagaacg ttatgtttgc aaaatttttt ccaaaaatga ccgcttgtat tctgattttt
      181 ttattagcgg cttgttcttc tcttccccct tcttcctctg aagtcgaatt taaccgctcg
      241 gaagcggtaa aagcccgtat taatttggct ttagcttatc tggagcaaaa tgatttccca
      301 aaagctaagc agaatattga taaagccttg gctcacgatg aaaaagatta cctcccttat
      361 tcggtgcttg cctattatta ccaacaaaca ggtgatgctg aaaatgccga aaaagcctac
      421 caaacggcac tgaaattgag tcaaaaccgc cctgatgtgc tgaataatta cggcactttt
      481 ttatgtaaac agggtcaatt tcaacaggct tatcagcaat ttgagcaggc tgtcaaaagc
      541 aaagcaccct actatcacca agcggatagc ttagaaaata tggtgttatg tgcgaaaaaa
      601 gagccgaatc tgcaaaaaat tgccgaaaca ttgaccgagc ttgagaaatt ggataaacct
      661 cgagcaaatt tattgaagga aaactaatga ctgacttaaa tctaaaaatc agccaaatta
      721 ttgccggcga actcaacgtt ggctcacacc aaattcttgc agccatcacg ctattaggtg
      781 agggcaatac cattccattt attgctcgtt accgtaaaga agtgaccggc gggctagacg
      841 acacccaact tcgccatttt gaaacccgct taatttattt gcgtgaaatg gacgaacgcc
      901 gccaaaccat tttgaagtcg attgaagaac aaggcaaatt aaccgatgaa ttaaaagcca
      961 aaattctaag cagtgaaagc aagaccgagc tggaagatct ctatttgccg tataaaccaa
     1021 aacgtcgcac cagagggcaa attgcgattg aagcagggtt agagccattg gcggacagtt
     1081 tatggaatga tccgaaacaa gatcctgaaa ccttagcggc aaactttgtt gatgcggaaa
     1141 aaggcgttgc ggataccaag gccgcattag acggggcaag atatatttta atggagcgtt
     1201 ttagcgaaga tgctgagcta cttgcaaaac ttcgccaata tttgaccgct tacgccacgt
     1261 tggaatcgaa agtgattgac ggcaaagagg aagagggcga gaaattccgt gattattttg
     1321 ctcatagcga gccgtttaac agcgtgcctt cccaccgtgc tttggcgatg ttccgtgggc
     1381 gaaatgaagg ggtgttatca ctttcattaa atgccgatcc gactgcagaa gaaggcacaa
     1441 aatccagcca ttgtgaagaa attattcgtg agcatttggg cgtgattttt aataatcaac
     1501 cagcagataa atggcgtgag caagtgattg cttggacgtg gaaaatcaaa gcagctctgc
     1561 atttagaaac cgaattaatg gcaaccctgt gtgaaaaagc tgaagaagag gcgattgatg
     1621 tgtttgcccg caatctctcg gcattattaa tggcagcccc tgccggtgcg agaaatacaa
     1681 tggggctaga cccgggcttg cgtaccggcg tgaaagtggc ggtggtggat aacaccggta
     1741 aattgctgga taccgccaca atttaccctc acactgggcg agaggcggag gcacagcttg
     1801 cgattttcag cttaatcaaa caacacaatg tggaactgat tgcgattggt aacggtacgg
     1861 cctctcgtga aaccgaacgt tttgccaaag cggtgattaa agaaatcaaa gagaataaac
     1921 cgcaaacggt ggtggtgagt gaggctgggg catcggtcta ttctgcctct gaatttgcgg
     1981 ctaacgagtt tccaaattta gacgtttcat tacggggagc ggtttcgatt gcccgccgtt
     2041 tgcaagatcc acttgccgag ttggtgaaaa tcgaaccaaa agcgattggt gttgggcagt
     2101 atcaacacga tgtaaaccaa tcccaacttg cccgtaaact cgatgcggta gtagaagatt
     2161 gtgtaaacgc agtgggcgtg gatctgaata cagcctccgc tccgttgctg gctcgggtgg
     2221 cgggaatgac caaaacattg gcacaaaata tcgtggcatt ccgtgacgaa aacggccgtt
     2281 ttaccagccg ctcagagctg aaaaaagtgc ctcgtttagg gccgaaagcc tttgaacagt
     2341 gtgccggttt tatgcgaatt atcggtggga aaaatgccct tgatgcctca agcgttcacc
     2401 cggaagctta cccggtggta gaaaaaatct tacaggcaac tacctcaaca cttgcagaat
     2461 taatgggtaa caacagcaaa attcactcgc tcaacgccaa agattttgtg gatgagcagt
     2521 ttggtttacc aacggtgaac gatattttca aagagttaga aaaaccgggg cgtgaccctc
     2581 gtggagagtt taaaaccgcc gtgtttatgg acggcgtgga agaaattacc gacctcaaag
     2641 ccggtatgat tttggagggc acagtgacca atgtggcaaa ctttggggct tttgtcgata
     2701 ttggcgtaca ccaagatggc ttggtgcata tttcaatgct ctcaaactct tttgttgaag
     2761 atccgcacac ggtagtgaaa gctggtgatg tggtgaaagt caaagtgctt gaggtggacg
     2821 ctgcccgcaa acgtattgcc cttacgatgc gtttagacga caaaccaacc gataaaaaag
     2881 agccaacaag cggtcgaaat tcagcagaaa tttgcaaaaa tacgcagaaa aatgaccgct
     2941 tgcaaagcaa caatcgcaac gcttttggta acaatgcctt tgccgatgcg ttaaaaggct
     3001 ggaagaagta aggcgaaaac agataaaagc aagggcgaaa tatttttcgc ccttattact
     3061 aacttttatc tgttaacctg cttacttaag ataacgtaca aacccctcta aactttcact
     3121 ttcaggggct aatgcaattt gctcgccctc tgccggtgag ccaagcataa ttaaggcaat
     3181 gattttatca gattcttggc aaccaaaagc ggagcgaaga gcagagccgt taatccattt
     3241 attggtgatc caaaccgtat caaagccctg tgcatttgcc gctaactgaa tcgcataagt
     3301 tgcacagcct gcggtaatca tttgttccca acttggcact ttggcgatgc tgtcgtctaa
     3361 tgttgctacc acgccgataa tcattggagc ttgattagct aatttttccg ctttttttaa
     3421 gcgttcctcg cccatatcaa attctgctac cgcagacttt aagcattcac caaactgtgg
     3481 cataccgctt ttttcaatca ccacaaagcg ataaggcttt aaccgcccgt gatccggcac
     3541 tcgcaagccg gcttttagaa tttgttccag ttgttctgca ttcggggctt tatcgccaaa
     3601 ttttttattt gaacggcgat ggtgtaataa atccaagatt tgcataagcg ttcctttgtt
     3661 aattttttgc gttcaagaat agcatatttt cttcatttag cgattgcttt atactgtgcc
     3721 gactgagttt atttttagga atttccgatg ttaacgattt taaaagcatt ttaccgaatc
     3781 ttccgttgta ttagagagtg tgtcattaat ctctttttta ttctgtttat tttgctatta
     3841 gtgccggtgg tcgcatttat cagctcttct ggcagcacgc aaaagccggt gttcaatcaa
     3901 ggggcgttac gtttaaattt agatggttat ttagcagata atcgggaaga attcactgat
     3961 ttctaccgct tggtgcaatc ggaattaggt agttccgagc cgtttaaaat ctcgactttt
     4021 gatgtggtgc aagcgattag ccacgctaaa aatgacccga aaattaccgg cttggtgtta
     4081 gatctgcaaa agctacaaag tgctgatttc agctcattgg attttatcgg caatgaaatc
     4141 aacaacttca aacaatcggg caagccggtg attgcagtgg gcgaagacta ctcgcaaaaa
     4201 caatattatc ttgcttcctt tgctgatgaa atttatctca ataaagtcgg tgcggtggat
     4261 ttaaaaggct taaattattc caacacttat ttcaaaacct tgctcgataa aattgaggct
     4321 gaaccgcata ttttccgtgt cggtacttat aaatcggcgg ttgagccgtt tatgcgtgat
     4381 gatatgtctg aggaggcgaa acaaaatgcc cgaggctggt taaacggcac ttggcaacaa
     4441 actgtggcaa cactagctca aaaccgcaac attgaaccgc aagcactgga tttatcgcct
     4501 gccaattaca ttgaaaaata taaacaagct aaaggagatg atgctcaact ggcattaaat
     4561 caaaaatggg ttagtcagtt agtgtccagc caagaaagtc gggataaact gattgcacag
     4621 tttggcaaaa acagcgaagg cagttataac cagattgaat ttttagatta tatgactgaa
     4681 ctaaacgacc gctttgcaga agtgaatgct ccgaaaattg cggtagtgaa tgtggaaggg
     4741 gcgattgctg gcggtgaaag tgacgaaatg aatgtgggca gcgagacgct ggtaaaatta
     4801 ctgcaacaag ctcgagatga caaaaatgtg gaaggcttaa ttctacgcat taacagcccc
     4861 ggcggcagtg ctgtggcgtc tgaactgatt cgccaagaag tggaagcctt tcaacaagcc
     4921 ggcaaaccgg tggttgcttc aatgggcgga atggcagcat cgggcggtta ttggattgcg
     4981 gctaccagcg ataaaattat tgctagcccg aatacgctta ccggctctat cggtattttc
     5041 ggtttagcag taacttttga aaaaaccgct aaaaatctcg gtgtgagcga agacggcata
     5101 gcgacttctg ccctagcaca acaagccggt ttaaaaagcc taccgcaaga gcaggcagaa
     5161 gtgctgcaaa ttgggattga aaacggctac gaccgttttt tagagctggt ttctcgtggc
     5221 aggaaaatgc caaaagaggt ggtagataaa gtggctcaag ggcaagtgtg gctgggaact
     5281 gatgcgttaa aacacggatt ggttgatgag ttgggcaatt ttaatgtggc atataatgcg
     5341 ttatctgaat tgatcaacca aaaacgtgaa gcggaaaacc aacctaaagt cgaacagttc
     5401 ggcttacaat ggtttgcgga gcaagatgac agcttatttg gcacgcttgc ccgtgatttc
     5461 aaagctcaat tacaatttag cgtggcaaat tggcttgatt taccgctgtt gaagcaaccg
     5521 caacaacagc tagagactct ttcacgtttt aacgatccga aacagatgta tctttactgt
     5581 ttaaattgtg ggaagataga ttaattattg aatttaaggg caggttttca cctgccctct
     5641 taaattacca ttgataacga taatttacta atacattaaa tggttgtttc agtttcttac
     5701 ctgaagcaac tgatgcctct aaacctaaac ggtgattacc gtttcctgca ctcaagccaa
     5761 gtgaaccttg cactctgccc ttgttttcgg caactccaaa ctgatattgg tttacttgca
     5821 ctttcgtact attggccttt ttcagcaatg ccgtttactt ccgcataagg ttgcagattc
     5881 caaccattat tcaaggcaaa gccttttgct actcttacgc cggcacgggc aactaaaaga
     5941 tttaaccgtt cctcatcggc tttaccgtta atggtgtggt aggcaagttg agcttgtggt
     6001 gttactaccc agtcattgtt taaaacaagc gactcaattt tagcaaattt tcactccaat
     6061 tgaaccgctt atctttctat tttgtgaacc tcctcacaaa aatggtgctg agaaaaatca
     6121 ctaacatcac tggaatggtt aagccgagta gtaaatgcac ttggtggtaa gagagaaggt
     6181 ggtatagcac gaagccgaca agccataatc cggcagcaac ccaatcaaca ttaggctgtg
     6241 cttggtggcg ttttaacaca aagaaatccg caatttgcac ggcaatcatc ggggcgaata
     6301 ccgagcctat cagcagcagg aaattttcat attgggtaac cggtaaactg attgccagta
     6361 gcgtgccgat gattgtgact agaatggcgg ttggggtttc tttgaatttt gccgtgatat
     6421 tgccggcact gacaccggcg gaataggcat caagaaacgt ggtagtcaca gtcgaaagaa
     6481 tcatcaccat aatgccgata aggctcattc ctgtcattag taacataggg gcaatttcgg
     6541 tttgcccggt aaatagcacc atacccagac ctaacgcata catccacgca ctggtgatca
     6601 aatagcctat ggtcgccgaa agggtcgcgg caaaaggctt tttcgcttta gcggtatagt
     6661 ctgataccaa aggtagccac gaaagaggca taatagttgc taattccact gcggtgctaa
     6721 acggcatttc acccgaaaca ggaaaatttt cctgcccatt caatacctta atgcttagcc
     6781 ataaggtgag caaaaacatc gctatcaatg tcactaactt gaattttccg acctgattag
     6841 agccggtaaa taaccatagc acaatcagca acccaagcac gattgcccaa agcgagaaag
     6901 ccgaatattc ccataaggca aggctaaggg cattactgat ctctgcccct gtatagatca
     6961 taatggctgt ccaaccaaca agctgtagca cattggcaag ggagaaaaac accgagcctc
     7021 tgccaaagga aatttgcacc gtttgcatcg catttttgcc ggttttcgcc ccaattaagc
     7081 cggcagcaaa aaacaaaatg ccgcctaata aatgccctag cactatcgcc agcaagcctt
     7141 gttgccagcc aagtggggca atccaagtgc caaccacgat tgcactggca ctaatgcccg
     7201 ctcccgccca aatcaaacca ctgtttagcg tactaagagt tctattcatt acggcctcca
     7261 tttgcaaatt ttgctaagtt tttgaccgct tgttgccaat cttttgcttg ggtaacggca
     7321 cttaccaccg cggcactgcc gacaccggta tgcattacat tttcaatgct ttgctcatta
     7381 attccaccaa tcgccacagt tggaatgtta agcggtgcaa cgagagcaac atatttggct
     7441 aaatttgtta agccttgtgg ttgagacggc attactttgg tttgagtagg gaaaacgtgg
     7501 ccaaaagcga tataagacgg tttcaccgcc aatgcccgca ttatttcaaa gtagcagtgg
     7561 gttgaaacac caagccgtaa cccagattgc tgaattgcat ttaaatcggc ggtggctaaa
     7621 tcctcctgcc ctaaatgcac gccgtaagcc tgatacttca tggctaactg ccagtaatca
     7681 tttacaaaca aacgcacatt gtgctgtttc gccagtgcga ccgaatgggc aatttcttgc
     7741 tcaatctctg caagcggtcg atttttgatt ctaatttgca aggtttttac ccctacaaga
     7801 attaagcgtt caagccattt aacgctatct acaacagggt aaagcccaag ttgatattcc
     7861 gttggagcaa aaggctcttt cggcaattta agaggggcag aaatcagctc ggtttgtggg
     7921 aagaaagcga tatcatcagg gtagccggtg tggcaaagtg aacttaaagc agtttgccct
     7981 ctgccttgtt tttccgataa gcctttttgc aaataagcgg tggcaacagt gacggcatca
     8041 gctaaatcaa agccggttgc caacatcgct ccaaccgctg aagcataggt gcaacctgtg
     8101 ccatgggtat tcacactttg ctgtcgggcg tgactaaagg cataaatttc atttgcagtc
     8161 agcagataat ctcttaccgt ttcccccagc cattcaaaat gtccaccttt ggctaacacg
     8221 gctttgattc cctgtgcaaa cagtttgtgg ctagcggttt tcacatcacc aaaggtctgg
     8281 atttctgtgt cgcttaataa agcgagttca gtgccgtttg gagtgattaa atccaccagc
     8341 ggatacaatt tttgttgcac tatctgcaat aaaatactgt cggataacgc ctgcccactg
     8401 cttgccactg ccacagggtc gtaaaccaca taacaataat gcgagctttc tgcacggatt
     8461 ttttggatat attcacacaa gatctctact tgtgcttgcg agcagagtaa gccgattttg
     8521 attgcgttcg ggtagccttg aaccagcaag gcttcaaact gttggcggaa ggtgtgatca
     8581 tcaacaggcg ttacacacag cacaccgtgc ggatgttgag ccgttacaga agtaactact
     8641 gaacaaccca ctaggttaaa atcgtgaaag gtatgtaaat cggtttgcag accggcaccg
     8701 gcacaggaat ctgagccggc aaccgtccaa atgacgttag gttggtatgg agagtttgaa
     8761 taattagaca tcgcaaaatc ctcataatat gcttagggtt ttgcttgcca gagatgtggt
     8821 aatgatccca aaatctgaat ttgggtaaaa cttgttccct acgcaggtac taacctacag
     8881 gttccacgga tctcgctgtt gcgatctcag ccttacggca ctccgacaag cgtttttagt
     8941 atagcttaca agcggttatt ttttataaaa aaatgcaaaa tatccgttgt gaagtctatt
     9001 agagggaaat ttgcattccc tcatcttggg gcaaggtggt aacttgcccc gtcgttaagt
     9061 gagtggtttt ttatatctcc tctaattcca aatctttggt ttcgtggact tgccacaatg
     9121 cccagaagct cagtaatgag gcaaccgata aatagccgcc tacaccgaat aagccgaaat
     9181 tttcattgat tttgaccgca ataatagtga acacgctagc tcctaaaata ccggcagcgg
     9241 tgtaggcaag cgaagcccct gtgtaacgta cttctgttgg gaagagttcg ggtagaatta
     9301 ctgccatcgg gccgaagctt aagccgatta agatcattcc aatggtgagg aaaataaaga
     9361 tcgaagtcgg tgtgccgttt tcgaggaaaa acggcattgt taagccgtaa actacggttg
     9421 ctcctgtggc aagtaacagc agtaaacggc gtccgatttt gtctgaataa atgccggaga
     9481 agaaaatcgc aatgccgaaa atcacggagg taatcagcaa atattgggtg tagagattta
     9541 ccggtaaacc taagcctgta gcgtgtcctg cttgagaaac tgccaccggg cttttgacga
     9601 aaatcggggt gaaagcaact aaaatgtaga acaacacata gccggcggtg gcaatcagca
     9661 cgccgatcat aaaaggcttg aggtgttggc taaacaaagt tttaagcggg gtatggcggt
     9721 ttttaccttg ttgttccgct ttaaggaaaa tcgggctttc gctgatctta attcggatat
     9781 aaagcccaat ggcgatcatc acaatagaag cgacaaacgg aattcgccac gcccaatcca
     9841 agaaggtttg ttcaccgtaa attaaattca ccaagtagaa cgctccgttt gccaacagca
     9901 agccgattgg ggcgcccatt tgcggaaaaa taccaaaaaa tgcccgcttg tgtttcgggg
     9961 cgtgttcagt ggcaacgaga gcagctccgc cccattcgcc gcctaagcct aaaccttgtc
    10021 cgattctaca gaggcagagt aacacggttg cccaaatgcc aatggcggca taattaggca
    10081 aaagcccgat tgctacggta gataagccca ttaataagag cgaggcaatc agagtttgtt
    10141 tgcgtccgta tttatcgccg aaatgcccga ataaaatcga ccccatcggg cgggtgaaaa
    10201 aggcaagagc tagtacggaa agcgacatta attggttgga aaccggatca tcgctattaa
    10261 aaaactgcac attaaacacc agcactgctg ccatcgtgta gatgtagtta tcaaaatatt
    10321 caatcgccgt gccgaccatt gaggcaaccg ccactttagt tgggtttgag tgagttttag
    10381 acatattcaa ccctcacata ttgctcaacg gtttcaggcg ttaatgcccc aagggtatcc
    10441 agcagattga cggcaaattg cccgtattga gttggtttga gtgcttgagc agccacttcg
    10501 cctgcaacgg cataagcggc gcaagcctca ataagtgcgt tgaaatagtg ctctttgtcg
    10561 gcaacggcta agaatgcccc gcataccgca cttaataaac agcctgaagc ggtaattttg
    10621 gggaacatcg ggctgccgtt gtgcaataaa gctgtgtgtg agccagagct taccacatcg
    10681 gtttcaccac tgattgcgac taaggtttgg taacgtttgg caatctgttg ggcgatttca
    10741 accacattat gcgagccttc gccggcatca acgcctttgg cttgccattc tacaccggcg
    10801 agggtagcta gttcccccgc atttccacga atggcggtga agtgaatttg gtcgactaag
    10861 gtttcaactg tttgacggcg gaaaggtgtt gctccaacgc cgacagggtc aagaatgagc
    10921 ggaataccta aacggttggc ggttttgcca gcaagctcca ttgcttctac ttctttgccg
    10981 ataagcgtgc cgatattaat caccacggcg ttactgagtg ccggcacgga ttccatctcc
    11041 tcaatagcag ctgccataat gggagaagca ccaagagcca ataagccgtt ggcagaaaaa
    11101 ttagcggcaa caatgttggt aatgttgtga acaagcggtc gattttgtcg aattttttgc
    11161 aaataatgcg agtgataggg gagtgatgtg gtcatcgttt attccttaat atgattgaaa
    11221 aacaacgcac caacaccaac ggggaataga tgggtttacg cctttagttt cctacgtcag
    11281 tgctaactgc atcaggttca acgggtattt ctcagcttgc ccttaggcaa gcaccccgac
    11341 taaatgaggc tttaatataa tcactaaaaa agcggttgta aagggctaca actgcagttt
    11401 tcaattaagc tgcttctcgg tgatagaaac gcaagctgtg ctctttttgg cgggcggaac
    11461 taaaggcgga gactcgtttt aaatagccga ttacccgagt gccgtaatca atattatcgg
    11521 agccacattt gctacaactg tgcaacgtgc gtttgtcgat gtggctacat tcgttgcaaa
    11581 tcgtgatttt aacgttaata caaaaataat tgcagccggt tttagcggcg gtatccagca
    11641 aggagcgata tccggtttgg gttaaggctt cgtctaaatt caagtgtaga gcggagcctc
    11701 cgtccagcca ttcaatcagc tctctgccgt gcagtaagaa tttatccaaa gcattaattt
    11761 cttcatcttc taccacatag aaataggaat tgtagcaatc tcgtggtacg aaatagccgt
    11821 cctctttgtc ccatttggcg tttttgaccc ctaaattttc agcaggcaca aattcggtat
    11881 taaattttac cccatacttt tcaccggctg cttggttagc ttggaaaata atttttaacc
    11941 gagattgcac aaaatcaata tagtctggat tgtaacctac ggttaaacct tgtgattcag
    12001 cagcttctgc cattccgtta atgccaatag tcaggaattg tttatgcagt gaaataaaac
    12061 cggcatcgta aaccggcaac ataccggcag ctaaatactc ttccatcagt ttgcggtaag
    12121 cgtattgata tttatggatc ttgctgactt cttcgcttaa atcacggtta tcttgcacca
    12181 aacggttcat attaatagta attacattga ttgaacctgt cgcaacacct ccagccccta
    12241 atgaatagga gaagctatga tcgctgattt catttctcaa gcggcagcaa gaagcaaggg
    12301 aatccggatt atctgattga taaataaaga atgaattgcc ttgagatagc tcttttgcca
    12361 tttgattggc aaactcgtca tctttacatt tgcccttttc ggtaagcatt gctgcggtca
    12421 caacagggaa agtgagaatc gctttgcttc gctctttatt gaaccattgc ataaagaaaa
    12481 gttgtaattt tgaagtggtt tcccaatttg gtttctcaaa atcaggaaaa acaaaacggc
    12541 taaacatcgc ttcaaaatag aatttgtcat acactgaaat attccaaaag acgctttgat
    12601 aaccacgagc ggctgccggt tggttgatgc tatacacaac ctgctgcagg tggttttcaa
    12661 tatctgaacg atgagtctgt aagtaattat cgccgtaatc tttgcgggca aaatagtcaa
    12721 aataggtcag aaattcaacc gtggcgactg caccggcaaa ctgagaactg actgcaaaga
    12781 caaaattgat aaaagaaccg cagaatgagg ctaaatgttt cggggctttg gattcgccgc
    12841 cgagtttagt caaaccatca cgcaagaaag ggtacatagt gactgaaacg cagtagggtt
    12901 ttaggctggt ttcatcgtgt acgtaaattt cgtgtgcttc gatttgacgt aaatattcac
    12961 aagcggtttc ttttccaaaa atttttgcaa ttttttcact cacttttgct cggttgattt
    13021 gcacaaaaaa atctttcatt agctcctgtt ccattgtcgc tatgtttttt tgcgtgacgt
    13081 tagcgttggc gtccattttt gaaccgtctg cggcattttt ggcttgaata tattggttaa
    13141 tgaaatgtag ttttccgtct aattgtgtcg gttgtaagcg aatcatattg aagctcctcg
    13201 aataaaaaga tggttaagat tttggttatt gcgtaaatca gtaaagcgtt ggttggtggt
    13261 taaactttcc aatcctcctc gttcggcaat ccaacgcccg gtttttaagt aggttagctc
    13321 gtgtaataaa gtctcggcga tttcgtgctg ctccaaacca ctataaagac aggtgtttag
    13381 cccctggttt tttgccagtt gcaacagcgg cagtaatttt tctgcttccc attctccgcc
    13441 cataaacaat acgcagctaa ttaagccttg gtagcgtttt aggcgttcag agagatattc
    13501 actgctaagc tctttcccaa gacaggcttt ccagctatcc gcactatggc aacctttaca
    13561 gccaagcggg cagcctgtaa tcagaaaagc aagtgaggtc tcattcggca cttcttgcca
    13621 aacaatttgt tccgagctga atctgagatt ttccattact aattcattaa cacaatatat
    13681 tgtgtttttt aacattattt aacactatat atagtatgtt agatctgttg aatgggaaaa
    13741 taaagagcaa taagtgaaaa aaaagagttg aaatttgaag aaatgaataa aatcaaaagg
    13801 atagcgaatg ataaatttta agcataaaaa agccgtgtat ttttttacac ggcgaatgaa
    13861 aagtctgatt aattgatttc aatgatatca aacagttttt ctaattgatg gcttaaaaga
    13921 gagagtggac gtttacttgc taatgtaaaa tttaggttaa aggcgctgtc tgttgattct
    13981 acatttaagc atttcacctc aaaaccacgg tgacgtataa cccgtaaaat acgctctaag
    14041 gtttcagggc gtttgttagc tttaagcgtt aattgatatt cttccatctt attctcctat
    14101 acctcatcgt ctaacatatc ggcattacac gcccccggcg gtaccagtgg ccaaacgtta
    14161 tcttcctgtg gaatacaaac gtgaagtaag taagcccctt tggcattgaa cattctgtct
    14221 attgcatctg acacttcgct cgctttctca attcgctcac cgtcaatatc aaaggctttc
    14281 gccaacaaca caaaatcagg gttatcatct aaaatggttt ggctgtgtcg cccgtggaag
    14341 aacagcgatt gccattggcg aaccatacct aaacgttggt tatccagtaa taggattttg
    14401 accgctaaat cagctctttt aagcgtgccg agttcttgaa tattcatcat aatcgagcca
    14461 tcaccggtaa ttaaaataac ctgatcttcc gctcgagctt tgattgcccc aatcgccgca
    14521 ggcaagccaa aacccataga gccaaaaccg gcagaggtga tatagttttt cggatcgtga
    14581 taagttaaat gttgtgccga ccacatttga tgctgcccta catcggtagt gacgatgctg
    14641 tttttggctt tccgctgtga aagcgtgtgt aataacgcca cggcatcaat attgccatca
    14701 ccactatttt cttgatattg aaagtcaaat tgctgcttta aattacgcac atcttcacgc
    14761 catggttcaa tatctaacgg ttgagccaag taattcacgg cttcaatcaa attccctttt
    14821 aaggcaactt gtgcttgacg gagcttgttg atttccgcat tgtcgatatc aatgtgaatc
    14881 actttagcgt gaggggcaaa agtgtctaat ttgccggtaa cacggtcatc aaagcgggca
    14941 ccacaggcaa tgagtaaatc acactcttgt accgcgtaat ttgctgcttt tgtgccgtgc
    15001 ataccgatca ttcccatata gagcggatcg gttggatcga tagtgcctaa cccttttaag
    15061 gtagaaacag acggaatatt tgcaattttt acaaaatttc tgaccgcttg tacaccatca
    15121 gccatactaa cgccaccgcc gacataaagt accgggcgtt tggcggtggc taataattgt
    15181 ttggcaacca ctaatttgtt gggatcttgt gcatcggcag gttctttagg ataaacgata
    15241 ggcagagccg aagtttgagc tagttgcaca tcacgtggaa tatcgaccag caccggacca
    15301 ggtctgccac tttgtgcaat ttggaatgcg agggctaaaa tttcagggag ctcctcaata
    15361 ttctgaacaa taaaactgtg tttagtgcaa gcgagtgaca aacctagtac atcagcttct
    15421 tggaaggcat cagtgccgat taaatggctg gcaacttgtc cggtaattgc taccacagga
    15481 atagaatcaa gtgcggcatc gcctaaaccg gtgattaaat tagttgcccc agggccggag
    15541 gtcgcaatac aaacccctac tttacctgtt gcacgggcat aaccgatagc tgccattgca
    15601 gcaccttgtt cattgcggca aagtaaatga tctaagcctg aatcataaat tgcatcatag
    15661 gtaggcataa tagccccgcc cggatagcca aaaagtgtcg ttaccccgtg agcttttaaa
    15721 ctctcggtga taaatcttgc tccattcatg gatgttgtgt ccttaatatt tttattattt
    15781 taaaaccagg caatatagat aacataaatt ccctgttttt taaactttat tttcagtaaa
    15841 aataaatagg attccatcat ttatttggac aaataaaagt cgtttttatt taggtagaga
    15901 aaggaattac tacttaagag gtattttggc aaattttatt gatttaattc aataaatctt
    15961 cattttgata tagtcggctt ggtttaaatt tcatattctc gcaactgaat atcagggatt
    16021 atc
//
LOCUS       DANLZQ010000055        15968 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.055, whole genome shotgun sequence.
ACCESSION   DANLZQ010000055 DANLZQ010000000
VERSION     DANLZQ010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15968)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15968)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15968
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.055"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(93..1133)
                     /locus_tag="PXE50_001497"
     CDS             complement(93..1133)
                     /locus_tag="PXE50_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HDL5622409.1"
                     /translation="MKKQLRKNLTQNDRLQPQAQTEIFSFGDPIPVLDRADILNYLEC
                     SAMYEKWYNPPMSFDGLAKSLRSSTHHESAIITKANILLSTCEVDSRYLSRRDLSSFV
                     KDYLVFGNAYFEVVRNRLGQVQRIESPLAKYVRKGLEAGQFYYVPQRFDHQEHEFAKG
                     SIYHLLEPDINQDIYGLPQYLSALQSAWLNESATLFRRKYFLNGAHAGFVFYMSDASQ
                     KQEDVENIRQQLKQSKGVGNFKNLFVHAPNGKKDGIQIIPIADVSAKDEFFNIKNVSR
                     DDVLAAHRVPPQLMGIIPNNTGGFGNVADAAEVFFITEIEPLQERLKEFNQWLGQEVI
                     KFKPSKLLQRTQ"
     gene            complement(1142..2944)
                     /locus_tag="PXE50_001498"
     CDS             complement(1142..2944)
                     /locus_tag="PXE50_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase ATPase subunit family protein"
                     /protein_id="HDL5622410.1"
                     /translation="MENENTITEYEVLAANPLHDKREAQSKYWAGYTVTEISRQLNIP
                     VSTIASWKKREKWDEISPVGRVEATLESRLNLLIMKESKNNNDYKEMDALRRLLESTA
                     RIKKYSNGGGNEADLNPNIKNRNKGDRKKPEQNAISEEQAELLINGFLDGMFHYQKKW
                     HEAGLTHRIRNILKSRQIGATYYFAHEALVDALVTGRNQIFISASKKQALQFRAYIVA
                     YAKRVADVELKGETITLPNESQLIFLGTNSKTAQSYHGNLYFDEIFWVNRFEEIRKVA
                     AGMASQKQYRITYFSTPSSITHSAYLLWSGKLFNRKRPKAEQVEIDISHANLKNGKKC
                     GDGQWRQIVNIYDAEAGGCNLFDIEQLKLENSPDEFEQLFMCEFIDDNQSVFKFTMMQ
                     RCLVDSMEVWRDYVFTDGYQRPFGNKEVWVGYDPSYTGDRSALVVIAPPKVDGGKFRL
                     LEYRTFKGADFAGQAAEIVAICAKYNVTRLAIDTTGLGVGVYEIVKKERPDAVALTYN
                     VELKSKMVLKGLDIISKGRFEFDSMHAVEVGASFMAIKKQITNSGRQVTYVADRSEEA
                     SHADLAWACLQVFINEPFDGKLEETTGTVDFLDD"
     gene            3094..3921
                     /locus_tag="PXE50_001499"
     CDS             3094..3921
                     /locus_tag="PXE50_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPO family capsid scaffolding protein"
                     /protein_id="HDL5622411.1"
                     /translation="MTTKSKWFVVATEGATTDGREISREWLTQIEENYDPKNNYGARI
                     NLEHFRWRWFEKDDPHSYSYGDVLAVKTEEREDGKLQLLAEIAPTEALVKLVKDKQKV
                     YTSVEIDLNFADTGEAYLVGLAVTDTPASLGTEYLTFCAGATHNPLADRKQKPENLVS
                     EAVEANLEFTAEPEKGAWLEKFKAMFTKAKTDNDGKFAEHEKAMELLAEQFSKVSTEN
                     DRLQTELSTLQIEFTELQKQAGEFAEKFAKLEQEPSANYTPRPKATGAKAGDVQTDF"
     gene            3935..4963
                     /locus_tag="PXE50_001500"
     CDS             3935..4963
                     /locus_tag="PXE50_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein, P2 family"
                     /protein_id="HDL5622412.1"
                     /translation="MKDLTLEKYNAYLARQAELNNLPFNALATGIKFTVQPSVQQKLY
                     EKVRESSDFLKSISFVFVDEQTGETLGLDSAHTVASTTDTSGDGERKTTSIAKLVKQT
                     YHCQQINFDTHINYKQLDMWAKFPDFQQKVANVAAKQRKRDLIMIGFNGTSRAATSDR
                     NSNPLLQDVAKGWLQKMREDAKERVMNGESTDNQVLVGKGQEYANLDALVMDATEELI
                     DEWHRDDTDLVVITGRKLLADKYFPIVNQQNAPTEELAADIVISQKRIGGLKAVRVPF
                     FPANAILITKLENLAIYVQEGTTRKHIENVPKKDRIETYESENIDYVVEDYGCAALIE
                     NITLKDKE"
     gene            4973..5662
                     /locus_tag="PXE50_001501"
     CDS             4973..5662
                     /locus_tag="PXE50_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase endonuclease subunit"
                     /protein_id="HDL5622413.1"
                     /translation="MRMSPARAHFLRKTAESESATPNRENLEGLQGYDLVLAQLKAHQ
                     RQLKKIQSIERKIEFKRNNFEQYRPWVEGSLAKGSGVQDTVITTMLIWSIDIGDYPTA
                     LAIAQYVLMHDLAMPEQFERTPATALVEELAEAAKKARDQKQPFEAAVLKQANDLTAE
                     FDMPDPVRAKLLRELGELIQEAEPQTALEHYQRAIALDPQCGAKGLRDKLEKQLAKQA
                     EEPKPAEEQNE"
     gene            5774..6289
                     /locus_tag="PXE50_001502"
     CDS             5774..6289
                     /locus_tag="PXE50_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head completion/stabilization protein"
                     /protein_id="HDL5622414.1"
                     /translation="MEQRNHVISIPKVNGYESSKNAIKPTAESDETITNNGFFPNIEL
                     LEVRNAMRIDGTVINERLKQAVIEAMATVNADLKAYRLNAEQAQKANLQACDDEQING
                     ESVLVYKYKRAVYCLAVANLYERYRSYDSTKDGHDKAEELESTAGDLKRDYHFAVRDI
                     LGENRMISELI"
     gene            6286..6498
                     /locus_tag="PXE50_001503"
     CDS             6286..6498
                     /locus_tag="PXE50_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail protein X"
                     /protein_id="HDL5622415.1"
                     /translation="MNTLIARQDDTLDELIFRHYGQTAGLVEQALEYNPELAHLPRLP
                     IGTVVTMPDIESRFATVAKSSVQLWD"
     gene            6504..6710
                     /locus_tag="PXE50_001504"
     CDS             6504..6710
                     /locus_tag="PXE50_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin"
                     /protein_id="HDL5622416.1"
                     /translation="MHKTEQASYFGAIFGFFGSLTLSDWGVVVSILVAILTLLLNWAY
                     RAKEYKLKEREFELKLQNQGKKNE"
     gene            6703..7269
                     /locus_tag="PXE50_001505"
     CDS             6703..7269
                     /locus_tag="PXE50_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HDL5622417.1"
                     /translation="MSKSVKVGVFVCSVAAIIGTVKQYYSSEIRTSETGLAIIGNAEG
                     CRRDPYKCPADVITVGIGSTEASGEKINVNHKYTDKEIAERWIKDLKIAERCINRYFN
                     GDKMNENQFSAMVSAAFNMGCYNLRFYPNENGKYIQTTIHKYAMAKDFKAMCNRIPDF
                     NRSGGKVLRGLKIRREKEKALCLGQEVK"
     gene            7266..7721
                     /locus_tag="PXE50_001506"
     CDS             7266..7721
                     /locus_tag="PXE50_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622418.1"
                     /translation="MIVKLCQMTNKHFSPLMIVLVLVGVLANFVQFRQNESLKADLQA
                     RTTQNQLIQADNRNLANQLENSQIQLEAYQKQVDDLNQKVLAKMKQAEQRSNEILNEL
                     EKHKKWADSAVPPSVGKLLNQRKRAVSHPQIEPDNLSEKAGVPNTGNRD"
     gene            7870..8091
                     /locus_tag="PXE50_001507"
     CDS             7870..8091
                     /locus_tag="PXE50_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA family transcriptional regulator"
                     /protein_id="HDL5622419.1"
                     /translation="MSDQIDRANELAEKAREAALAKILQNQTACTSLFECEDCGEPIP
                     EKRREMVIGCTRCIECQTIYEHKQKGYRR"
     gene            8088..8573
                     /locus_tag="PXE50_001508"
     CDS             8088..8573
                     /locus_tag="PXE50_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5622420.1"
                     /translation="MIKPDRLRAVLTQTIDIFQANPEKLILQYDKGKIKSKGSQSHSF
                     EYHYDLELIVVDFPYHPDVLFVPVLNFVRNEQWELLQNPELQDKIEFEIDHNNHESYD
                     IYIRLPLTERVIVKEQDGHLTATHADEPNLADVSPFTRLTEYEVYLKDELIYQWAEPN
                     E"
     gene            8566..9024
                     /locus_tag="PXE50_001509"
     CDS             8566..9024
                     /locus_tag="PXE50_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HDL5622421.1"
                     /translation="MSEPIEQVKTAFDSLLNNISKPRRRLMYQQIGRELARSQRRRIK
                     AQQNPDGSAYEPRKKPKKGVKSKIKSGKMFDKITQPRFMRLRLESEGVSLGYEGGDAV
                     IARIHQQGLIGRVRKDWDLKVKYASRELLGFTDDDLQMIEDYMINILAGS"
     gene            complement(9075..9353)
                     /locus_tag="PXE50_001510"
     CDS             complement(9075..9353)
                     /locus_tag="PXE50_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622422.1"
                     /translation="MEILFILLGLIGFGALLAIGFTTFAAIFGVVTTVFLSLLSLLAN
                     MVGLSIIVILISLYVLLPLNTFILIALIFSAILGFLCWYHSDRQSVNQ"
     gene            9392..12304
                     /locus_tag="PXE50_001511"
     CDS             9392..12304
                     /locus_tag="PXE50_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5622423.1"
                     /translation="MSNNLKIQVVLSALDKLTAPFKSVVKQTEKLSQSLKVQRDELKA
                     LEKTQSKMQSFKKMDDSIKKSNETILKQTKHLDNLKNKISQMKNERIELKVKMDAKKR
                     EFQQITKGGSAWSARAAFLDKDFEKMQREYEKLGASISSVSRKRTEENRALKDSRHQQ
                     AKQLLYFRSLRRELRASGINIKAFAQSETNLTDKIAKANQLIDQQKAKLEKLNAVKAR
                     NEKYWATVEKVKNTSERLHNLGQRSMISGAAISAPVVGLGKGVVGMAQTAGKFEQFNA
                     ILEVTEGSAEKAKQSFDWVKQFAVDTPSNLDEAMEAFVKLRAYGLDPTNGLLQTLGDT
                     GAAMGKPVMQAVEAIADALTGENERLKEFGIKGSVVKGTNIIEYAYTDKLGKQQVAKV
                     NKNNRKEIEQTLTRIFNEKYAGAMEKQAKTLVGIWAKIEDYWTNFQMQVMESGAFDWI
                     KNKLQWVLDSLDKMAENGELQKWAEDVGAVIQETVQGLWAFGEKIIEVVKWLASLARE
                     NKGLIATFVKWSAILGSSLTVLGAFAVVASFALYPVARLALGIGKFTGASTLLNKALF
                     DSNDKFRLFNKSLYSSGTTAAFVKSKFNQLATLPNVLGSSFNKLGGGIKMLIPQLKTK
                     VFWLNMLKGILGKLWSAIRFIFSPLKLLLGIFSPIGLAITAISVAGVALYRNWEKVRA
                     FFGGFLQGLSKGLAPVLERFKPLGKLFETISNWVKSTFKWLSDLLTPADKTSESLDKA
                     SSAGEKFGLALAGAIDLVTSPVQWLVDQFKWISENMPSWDTIGEGVKKAATAIVPTEH
                     AKQITKTAEMSNNMYDPNYTPPQLEQKWIGGLVGNGKGRGFATGGYTGNGGKYEPAGI
                     VHKGEYVMTKEATARLGVANLNRLNYGKVAGLTALASSVAFAQPMPAVKIDSRPPLTA
                     SQPSPTVAPVSQNIHITINATGGQDPQAIARLVAMELEKQQRQAQARARSSLRDRG"
     gene            12366..12545
                     /locus_tag="PXE50_001512"
     CDS             12366..12545
                     /locus_tag="PXE50_001512"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622424.1"
                     /translation="MMFKEKGYDEFVNECVRKGREEHKAGLGFTLEQSRLHIKKTIEQ
                     KSQELNEFQREVVYG"
     gene            12538..12825
                     /locus_tag="PXE50_001513"
     CDS             12538..12825
                     /locus_tag="PXE50_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5622425.1"
                     /translation="MAKITIKPQALSQFDEIVKSVIEFTGFETSGIRLQSDIFDKIEQ
                     IAFMPLSGRAREDGTRETFVRRYRIVYDYDRQADEVIILAIIHSSRLYPRP"
     gene            12954..13559
                     /locus_tag="PXE50_001514"
     CDS             12954..13559
                     /locus_tag="PXE50_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HDL5622426.1"
                     /translation="MSEPNHAEQIRRLDNIIRLGTIAEVDLTTATARVNSGGITTDFL
                     PWLTFRAGTSQTWSAPTVGEQCVVLSVSGEFTTGVILFGIYTQNAPSQSADEHLFRFS
                     DGAEISYNTASGQLTVKNCKVVIVQATESITLDTPTVKATKNVVIGGNLSVKGTTSSQ
                     GAISTQGAVTAKGDVSGAGISLGSHHHIEQGDGRPTSGAKP"
     gene            13559..13894
                     /locus_tag="PXE50_001515"
     CDS             13559..13894
                     /locus_tag="PXE50_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HDL5622427.1"
                     /translation="MNRETGEQLEDEVEHIKQSIKDILLTAKGSRVMRRTYGSNLYKL
                     TDKPIAASLIMQLSAACVMALQQWEPRIAITRFKVEFAEDNYNKLICTLDFTLKHRKI
                     SIKGMRFTL"
     gene            13891..14808
                     /locus_tag="PXE50_001516"
     CDS             13891..14808
                     /locus_tag="PXE50_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate assembly protein"
                     /protein_id="HDL5622428.1"
                     /translation="MSEIVDLSKLPAPKVLEELDYETLLAERKAKFLSLYPESERAVM
                     AARLALESEPITKLLQENCYLQLLERQRINSAAQATMLAYATGTDLDVIAANFNVERL
                     VVQAEDLTASPPIVEELEPDDDFRQRVQLKIESVSVAGPRKAYTFHALSANGKIADVS
                     VISPQPAYVTVTLLSRDGNGAVASEIINAAKIALNDEEVRPIADRVTVQGASIVEYEI
                     NAVLHLYRGPEKEPILKAAKANLEAYINQTKRIGRDVTHSGIHAALHVAGVQNVEILQ
                     PRTDLVLTPYQAGYCVNYTLNVEVSDEYS"
     gene            14795..15427
                     /locus_tag="PXE50_001517"
     CDS             14795..15427
                     /locus_tag="PXE50_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein I"
                     /protein_id="HDL5622429.1"
                     /translation="MNTVKALLPPGSSLLEKRAAECLQQAVQNPIKFANLINPHKCPV
                     KFLPYLAWALSVDYWEEHWSEELKRETIIRSFEEHRKKGTASAVRRIVESLGYAFEIR
                     EWFAEKRQRQPGTFRVFVELKDKGISEKIYQELERLIEDAKPVSRHITELAVSATSKG
                     KANIFSGAHSGEIITIYPPKKLPVIVIKSKMDLFSATNSGEIITIYPNKR"
     gene            15430..>15968
                     /locus_tag="PXE50_001518"
     CDS             15430..>15968
                     /locus_tag="PXE50_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015981653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5622430.1"
                     /translation="MEQKYKTILTHHGERVIVEALANKIPVPLKEMAIGDGNGSSITP
                     SASQTTLVREVYRAEITDLLEDPQNRHQMIAELLIPENVGGFIVREIGLFDEQGGLVA
                     VANCPENYKPVLEQGSGKVQYYRMILQVSSSDAVTLSINNNIVYATRTEFNEFVNNLS
                     SPDGYKHIGRCKSVAELRT"
BASE COUNT         5086 a         3344 c         3552 g         3986 t
ORIGIN      
        1 gaaatatata atctaatcag gcaaaacttt tgctttatat attaaaaaag ccccaatcta
       61 ggagctgtat tgtcagtttg taaagatctg ttttattgtg tccgctgtaa caatttagac
      121 ggtttaaatt tgataacctc ttgacctaac cactgattaa actctttcaa tcgctcttgc
      181 aatggctcaa tctcggtgat aaaaaacacc tcggcagcat cagccacgtt gccaaaaccg
      241 ccggtgttat ttgggataat ccccatcagt tgtggtggca cacggtgagc agctaacaca
      301 tcatcacggc tcacgttctt gatattaaaa aactcatctt ttgccgacac atcagcaatc
      361 ggaataatct gtattccatc tttcttgccg tttggtgcgt ggacgaacaa gtttttaaaa
      421 ttccccaccc cttttgactg cttgagctgc tggcgaatat tttcaacatc ttcttgtttt
      481 tgtgacgcat cgctcatata aaacacaaag ccggcgtgag ctccatttaa aaaatactta
      541 cggcgaaaca gagtagcact ctcatttaac cacgcagatt gcagggccga aagatattgt
      601 ggcaagccgt aaatatcttg attaatatca ggctcaagca agtgatagat tgagcctttg
      661 gcaaattcgt gttcttggtg atcgaatcgt tgtggcacat agtaaaattg accagcctct
      721 aaaccctttc gcacatattt tgccaaaggt gattcgattc gctgtacctg cccaaggcga
      781 tttcgcacca cctcaaaata ggcgttgcca aatactaaat aatctttaac aaacgatgac
      841 aaatcacggc gtgataaata acggctatca acctcgcaag tggaaagcaa aatatttgct
      901 ttggtgatga tcgcactttc gtggtgtgtt gatgacctta acgatttcgc caagccatca
      961 aagctcatcg gtgggttata ccatttctca tacatcgccg aacactccaa ataattgaga
     1021 atatcggcac ggtctaacac cggaatcggg tcaccaaaac tgaaaatttc ggtttgtgct
     1081 tgcggttgta agcggtcatt ttgggttaaa tttttgcgca attgtttttt cattttttgt
     1141 cctaatcatc taaaaaatct actgtgccgg tcgtttcttc cagtttccca tcaaacggct
     1201 cattaataaa tacctgcaag caagcccacg caaggtcggc gtggcttgcc tcttccgaac
     1261 ggtctgccac ataagtcact tgccgtccgc tgttggtgat ctgtttttta attgccataa
     1321 aactcgcacc aacctcaaca gcgtgcattg agtcaaattc aaatcgtcct ttgctgataa
     1381 tatccaagcc ttttagtacc atcttggatt tcagctctac gttgtaagta agagccaccg
     1441 catctggtcg ttcttttttg acgatttcat aaacaccgac accaagccct gtggtatcaa
     1501 tcgccagtct ggtcacgtta tattttgcac aaatagcgac aatttctgcc gcttgtccgg
     1561 caaaatcagc ccctttaaaa gtgcgatact ctaatagtcg gaatttcccg ccgtccactt
     1621 tcggcggagc gattaccacc aacgccgagc ggtcgccggt gtaagacggg tcatacccaa
     1681 cccatacctc tttattgccg aatgggcgtt ggtagccgtc cgtgaataca taatctcgcc
     1741 acacctccat cgagtccaca aggcaacgtt gcatcatcgt gaacttgaac acagactggt
     1801 tatcatcaat aaactcacac ataaagagct gctcgaactc atcgggcgag ttttccagtt
     1861 tgagttgctc aatatcaaac aggttacagc cacctgcctc ggcatcgtag atattcacga
     1921 tttgtcgcca ttggccgtct ccgcattttt tgccgttttt caagttggcg tgagaaatat
     1981 caatttccac ctgttccgct ttcggacgtt tgcggttaaa cagcttgccc gaccaaagca
     2041 gataggcgga atgggtaatg ctcgaagggg tagaaaaata agtaatccga tattgttttt
     2101 ggctcgccat acccgctgcc actttgcgga tttcctcaaa gcggtttacc caaaagattt
     2161 catcaaaata gagattgccg tggtaagact gtgccgtttt cgagtttgta cccaagaaaa
     2221 ttagttgaga ctcgttcggc aaggtaatgg tttcgccttt tagctccaca tcggcaaccc
     2281 gtttggcgta tgccacaata taggctctaa attgcaatgc ctgttttttc gaggcggaaa
     2341 taaaaatctg atttctaccg gttactaacg catcaactaa cgcctcgtga gcaaaataat
     2401 aagtcgctcc aatttgacga cttttaagaa tattgcggat tcgatgagtc agcccagctt
     2461 cgtgccattt tttctgataa tggaacattc cgtctaaaaa gccgtttatc aacagttcgg
     2521 cttgctcttc ggaaatggca ttttgctcgg gctttttgcg gtcgccttta ttacggtttt
     2581 taatatttgg gttgaggtcg gcttcattac ctccgccgtt agaatatttt ttgattcgtg
     2641 ctgtactttc caacaaccga cgtaaagcat ccatttcttt gtagtcgtta ttgtttttgc
     2701 tctctttcat aatcagcaaa ttcagccgtg attccagtgt ggcttccaca cgtccaacgg
     2761 ggctgatttc gtcccatttc tctcgctttt tccaacttgc aatggtagag acgggaatat
     2821 ttagctgacg agaaatttcg gtcacggtgt aacctgccca atactttgat tgagcctctc
     2881 gtttatcgtg tagagggttg gcagccaaca cctcgtattc agtgattgta ttttcatttt
     2941 ccataggtgc gattatcaaa aatccacctt gtttaagcat ttgcttgagg ctgtgaaacc
     3001 cgatttaaca cgtaccacac attgaaaccg ccggcacaaa acaagatcat aaatccgatt
     3061 tttacccctc ccctttagag caaggaaaaa cagatgacaa caaaatccaa atggtttgtg
     3121 gtagcaacgg aaggagcaac tacagatgga cgcgaaatta gtcgtgaatg gctcacgcag
     3181 attgaagaaa attacgaccc gaaaaataac tatggtgctc gtattaacct tgagcatttc
     3241 cgctggcgtt ggtttgagaa agatgacccg cattcttaca gctatggcga tgtgttagcg
     3301 gttaaaacag aagaacgtga agacggcaaa ttacagttac tggcagaaat cgccccaacc
     3361 gaagccttag tgaagttagt caaagacaag cagaaagttt atacctctgt ggaaattgac
     3421 cttaattttg cggacacagg cgaggcgtat ttagttggtt tggcggtgac tgatacaccg
     3481 gcaagcctcg gcacggaata cctcacattt tgtgccggtg caacccataa cccactagca
     3541 gaccgcaagc aaaagccgga aaaccttgtg agtgaggcag tagaggcgaa tttagaattt
     3601 actgctgaac ctgaaaaagg tgcgtggctg gagaaattta aggcgatgtt taccaaagcc
     3661 aaaaccgaca atgacggcaa atttgccgaa cacgaaaagg caatggaact gttagctgag
     3721 caatttagca aagtttcgac agaaaacgac cgcttgcaaa ctgaactaag cacattgcaa
     3781 atcgaattta ccgaattgca aaaacaagcg ggcgaatttg ccgaaaaatt tgcaaaactg
     3841 gaacaagaac cgtctgccaa ttacacccca cgcccaaaag ccactggtgc gaaagcaggt
     3901 gatgtacaaa ccgattttta attgaggatc acgaatgaaa gatttaaccc ttgaaaaata
     3961 taacgcctac cttgcacgcc aagctgaatt aaacaacttg ccgtttaatg cattggcaac
     4021 cggcattaaa ttcacagtgc aaccatcggt acagcaaaag ctgtatgaaa aggtgcgtga
     4081 aagctctgat ttcttaaaat ctatcagctt tgtgtttgtt gatgagcaaa ccggtgaaac
     4141 cttaggttta gattcagctc acaccgtggc cagcaccacc gataccagcg gtgacggtga
     4201 acgcaaaacc acctctattg cgaagttggt aaaacaaacc taccactgcc aacaaatcaa
     4261 ttttgacacc catatcaatt ataaacagtt ggatatgtgg gcgaaattcc ctgattttca
     4321 gcaaaaagtg gcgaatgttg cggcaaaaca acgcaaacgt gacttaatta tgatcggctt
     4381 taacggcaca agtcgtgcgg caaccagtga tcgcaacagc aacccgttat tgcaagatgt
     4441 ggcaaaaggc tggttgcaga aaatgcgtga agatgccaaa gagcgtgtaa tgaatggcga
     4501 aagcacagac aaccaagttt tagtcggcaa aggtcaagag tatgccaatc ttgacgcact
     4561 cgtaatggac gccaccgaag aacttattga tgaatggcat cgtgatgaca ccgatttagt
     4621 ggtgattacc ggtcgcaagt tgcttgcgga taaatatttc ccgattgtga atcagcaaaa
     4681 cgcaccaacc gaagaacttg ccgctgatat tgtgatctca caaaaacgca ttgggggctt
     4741 aaaagcggtg cgtgtgccgt tcttcccggc gaatgcgatt ttaatcacta agctggaaaa
     4801 tttagccatc tatgtgcaag aggggacaac ccgcaagcat attgagaacg tgccgaaaaa
     4861 agaccgtatt gaaacctacg aatcagaaaa tatcgactac gttgtcgaag attatggctg
     4921 tgcggcatta atcgaaaaca ttacactcaa agataaagag taaggtggaa ctatgcgaat
     4981 gagtccggct cgggctcatt ttttgcggaa aaccgcagaa agtgagtctg caaccccaaa
     5041 ccgagaaaac cttgaaggct tacaaggcta tgacttagtt ttagcccaac ttaaagccca
     5101 tcaacgccaa ttaaagaaaa tccagtcgat tgagcgaaag attgagttta aacgcaacaa
     5161 ttttgagcaa taccgacctt gggtggaagg ctcccttgcc aaaggctccg gtgtgcaaga
     5221 cacggttatc accacaatgc tgatttggtc gattgatatt ggcgattacc caaccgccct
     5281 tgcgattgct caatacgttt taatgcacga tttggcaatg ccggagcagt ttgaacgcac
     5341 accggcaacc gccttggttg aagagcttgc agaggcggca aagaaagccc gagaccaaaa
     5401 acagccgttt gaggcagccg tgctgaaaca ggcaaacgac ctcaccgctg aatttgatat
     5461 gcccgaccca gtgcgagcca aattactgcg tgagctaggc gagctaatcc aagaggcaga
     5521 gccacaaacc gcccttgaac actatcaaag agcgatagcc ctcgaccctc aatgcggtgc
     5581 aaaaggcttg cgagacaagt tagaaaagca acttgccaaa caagccgaag agccgaaacc
     5641 agcagaagaa cagaatgagt aggcgaaagc cgaaatagag cgtatccacg ccagccaagg
     5701 ggcggatttt aaagggtgat ttattcattt tgcacccttt taaaatcccc accccttacc
     5761 ttacggaaac cttatggaac aacgcaatca cgttattagt atcccgaaag tgaatggcta
     5821 tgaatccagc aaaaatgcga tcaagcccac cgcagaatct gatgaaacta tcaccaataa
     5881 tggctttttt ccgaacattg agctactgga ggtgcgaaat gcaatgcgga ttgatggcac
     5941 ggtcattaat gagcggctaa aacaagcggt gattgaggca atggcaacag tcaatgccga
     6001 cttaaaagcc tatcgcctca atgcagagca agcacaaaaa gcgaacttgc aagcctgtga
     6061 tgatgagcaa atcaacggcg aaagcgtgct ggtttacaaa tataaacgag cggtctattg
     6121 ccttgcagta gcgaaccttt acgaacgcta ccgcagttat gacagcacca aagacggcca
     6181 cgacaaagcc gaagagctag aaagtaccgc cggtgatttg aaacgagatt accactttgc
     6241 cgtgcgtgat attttgggcg aaaaccgaat gattagtgaa ttgatatgaa caccttgatt
     6301 gcacgccaag acgacacctt agacgagctg atctttcggc actacgggca aacggcaggc
     6361 ttagtcgagc aagccttaga atataacccc gaactggctc atttgccacg tttgccgatc
     6421 ggcactgtag ttacaatgcc ggatattgag agccgttttg caacggtggc gaaatccagc
     6481 gtgcaacttt gggattaaaa aatatgcaca aaactgaaca agcctcctat tttggggcaa
     6541 tttttggctt ttttggtagc ctcaccctat ctgattgggg ggtggtagtg agtattctgg
     6601 tagctatttt aaccttatta cttaattggg cataccgagc caaagaatac aaactgaaag
     6661 agcgagaatt tgagctaaag ctacaaaacc aagggaaaaa gaatgagtaa aagtgtaaaa
     6721 gttggcgtat ttgtctgctc cgttgcagct attatcggga cggtaaagca atattacagc
     6781 tccgaaatcc gcaccagcga aacaggctta gccattatcg gcaatgcgga gggttgcaga
     6841 cgtgatccgt ataaatgccc tgccgatgta atcacggttg gcattggctc aaccgaggca
     6901 agcggtgaga aaattaatgt caatcacaaa tacaccgata aagagattgc cgagcgttgg
     6961 ataaaagatc ttaaaatagc tgaaaggtgt atcaatcgtt attttaatgg cgacaaaatg
     7021 aacgaaaatc agttttcggc gatggtatca gcagcattta atatgggatg ttacaacctt
     7081 agattttatc caaatgaaaa tggtaaatac attcagacaa caatccataa atatgctatg
     7141 gctaaggatt ttaaagcgat gtgtaatagg atacctgatt ttaaccgctc gggaggtaaa
     7201 gtgctaagag gtttgaaaat ccgccgagaa aaagaaaaag ccctgtgtct cgggcaggag
     7261 gttaaatgat tgtcaaactc tgccaaatga ccaataagca tttcagcccg ctaatgattg
     7321 tgctggtgct agttggcgta ttagccaatt tcgtgcagtt tcgccaaaac gaaagcctga
     7381 aagcagactt acaggcacgc accacgcaaa accaactgat tcaagccgat aaccgcaatt
     7441 tagccaatca gcttgaaaac agccaaatac agcttgaggc gtatcaaaaa caggtggacg
     7501 acctcaatca gaaagtgtta gccaaaatga aacaagcgga gcaacgaagt aatgaaatcc
     7561 ttaacgaact ggaaaagcat aaaaagtggg ctgattctgc cgtgcctcct agcgttggca
     7621 agctgctcaa ccaacgaaag cgtgcggtat cacaccctca aatcgaaccc gataatctgt
     7681 ccgaaaaggc tggagtgcca aacaccggca accgagatta acaccaacgg tgatcttgtc
     7741 aaagcactag acaaaagact caacaccatt gaggtatgcc aagtcatcat cgaatcgttc
     7801 gagcattgca tcgagcaata caacaaaatc aaccaaggcg agtgatcgcc ttttttaata
     7861 aggacgacta tgtcagacca aatcgaccga gccaacgaat tagccgaaaa agccagagag
     7921 gcggcacttg caaaaattct gcaaaatcag accgcttgca ccagcctttt tgagtgtgag
     7981 gattgcggag agccaatccc cgaaaaacgc cgagaaatgg ttattggttg cacccgttgc
     8041 attgagtgcc aaaccattta cgagcataag caaaaaggct accgcagatg attaaacctg
     8101 atcgcttgcg agccgtgctc acacaaacca ttgatatatt ccaagctaac cccgaaaagc
     8161 tgattttgca atatgacaaa ggcaaaatta aaagcaaagg gagccaaagc cattcgtttg
     8221 aataccacta cgatttagag ctaatcgtgg tggattttcc gtatcacccc gacgtgttgt
     8281 ttgtgccagt gctaaatttt gtgcgaaatg aacaatggga gctactgcaa aacccggaac
     8341 tacaagacaa aatcgaattt gaaatcgacc acaacaatca cgagagctac gatatttata
     8401 tccgcctccc gcttaccgag cgggtgatcg tgaaagagca agacggacac ctaactgcaa
     8461 cccacgccga tgaaccgaac cttgccgatg tttcgccatt tacccgttta accgaatatg
     8521 aggtttacct caaagacgag ctgatttatc agtgggcaga gccaaatgag tgaaccgatc
     8581 gaacaagtaa aaaccgcctt tgatagctta ctgaataata tcagcaaacc tcgcagacgg
     8641 ttgatgtatc aacaaatcgg gcgagagctt gcccgaagcc aacgcagacg gattaaagca
     8701 caacaaaacc cagacggctc ggcatacgag ccacgcaaaa agccgaagaa aggggtaaaa
     8761 agcaaaatta aatcgggcaa gatgtttgac aaaattaccc agccacgttt tatgcggcta
     8821 cgccttgaaa gcgaaggtgt cagcttaggt tatgagggtg gtgatgcggt catcgcccga
     8881 atccaccaac aaggcttaat cggacgagtg cggaaagatt gggatttaaa agtgaaatat
     8941 gccagccgtg agttgctagg ttttactgat gacgatctgc agatgattga ggattatatg
     9001 attaatattt tggctggtag ctaaatgatg aatagaaact tttgcaaaaa agcggtcaat
     9061 tttgaccgct tgagttattg attaacgctt tgtctatctg aatgatacca acaaagaaac
     9121 cctaaaatag ctgaaaaaat caatgctatc aaaataaaag tattgagtgg taacaataca
     9181 taaagtgaga tcagaataac gataatagag agcccaacca tatttgccaa taatgaaagc
     9241 aggcttaaaa atactgttgt aactacacca aaaatggcag caaaggttgt aaaacctatt
     9301 gccaataatg caccgaaacc aattaaccca agtaagataa ataagatttc catagatttt
     9361 cccttagcca tactacaatt aaggttataa tatgagcaat aatttaaaaa ttcaagtagt
     9421 tctttctgcg ttagataaat taaccgcacc atttaagagt gtggtaaaac agacggagaa
     9481 attatctcaa tctttaaaag tacagagaga tgaattaaaa gcattggaaa aaacacaaag
     9541 taaaatgcaa tcatttaaaa aaatggacga tagcattaag aaatccaatg aaactatact
     9601 caaacagaca aagcatttag ataatctcaa aaataaaatc agccaaatga aaaatgaacg
     9661 aattgagctg aaagtgaaaa tggatgcgaa aaaaagggaa tttcaacaaa ttacgaaagg
     9721 tggttcagct tggagtgcaa gagccgcatt tttagataaa gattttgaaa aaatgcaaag
     9781 agaatatgaa aaactcggtg catctatttc aagtgtcagc cgaaaaagaa cagaagaaaa
     9841 tcgggcatta aaggattctc gccatcaaca agctaagcaa cttttatatt ttcgtagttt
     9901 aagacgtgaa ttgagagcaa gcggcattaa tattaaagct tttgctcaaa gcgaaaccaa
     9961 cttaacagac aagattgcaa aagcaaatca attaatcgac caacaaaaag caaaattaga
    10021 aaaactaaat gcggttaaag ctcgaaatga aaaatattgg gcaactgtcg aaaaggtaaa
    10081 aaataccagc gaacgtttgc ataatttagg acaacgctca atgattagtg gtgcggcaat
    10141 ttctgcccct gttgttgggc tagggaaagg ggttgtcgga atggctcaaa cagcgggtaa
    10201 atttgaacaa tttaatgcta ttttagaggt aaccgaggga agtgctgaaa aagccaagca
    10261 aagttttgat tgggttaaac aatttgcagt agataccccc tcaaaccttg atgaagcaat
    10321 ggaagccttt gtaaagttaa gagcatacgg tcttgatcct accaatggct tactacaaac
    10381 attaggtgat acaggtgctg caatgggtaa gcctgtaatg caagcagttg aggcaatagc
    10441 agatgcttta acgggtgaga atgaacgctt aaaagaattt ggtattaaag gaagtgtagt
    10501 taaaggtaca aatattattg agtatgccta cactgataaa ttaggcaaac aacaagtcgc
    10561 aaaagtaaac aaaaataacc gaaaagaaat tgagcaaacc ctaacccgta tttttaacga
    10621 aaaatatgct ggagcaatgg aaaaacaagc taaaacgcta gttggtattt gggcaaaaat
    10681 tgaagattat tggacaaatt tccaaatgca agtgatggaa tcgggagcat ttgactggat
    10741 taaaaataaa ttgcaatggg tgttagacag tttagataaa atggctgaaa atggcgagtt
    10801 gcaaaaatgg gctgaagatg tcggagccgt tattcaagaa acagtacaag gcttatgggc
    10861 ttttggtgaa aaaattattg aagtggttaa atggttagcg agcttggcac gggagaataa
    10921 agggctaatt gcaacattcg ttaaatggtc tgctattctt ggctctagtt taacggtgct
    10981 aggagctttt gcagtggtgg caagttttgc attatatcct gtagcaagat tggctcttgg
    11041 tatcggcaaa tttacaggtg caagcacctt attaaataag gcattatttg atagtaatga
    11101 taaattccga ttattcaata aatcacttta ttcatcaggc actacggctg cttttgttaa
    11161 atcaaaattt aatcagttag caactttacc aaatgtgctg ggaagtagtt ttaataaatt
    11221 aggcggtggc atcaaaatgc taattccaca gcttaaaaca aaagtatttt ggctcaatat
    11281 gctaaaaggt attttaggca agttgtggag tgcaatccgt tttattttct caccgttgaa
    11341 attattactt ggtattttct cgccgattgg cttagcgatt acagctattt cggtagcagg
    11401 ggtagcgtta tatagaaatt gggagaaggt cagagccttt tttggaggct ttttgcaagg
    11461 attatctaaa ggtcttgcac cagtattaga gagatttaaa cctttaggaa aactatttga
    11521 aactatatca aactgggtta aatctacgtt taagtggtta tccgatttat taaccccagc
    11581 ggataaaaca tcggaaagtt tagataaagc gagttctgca ggagaaaaat tcgggcttgc
    11641 attggctggt gcaatagact tggtaacatc acctgttcag tggctagtcg atcagtttaa
    11701 gtggatttct gaaaatatgc cgagttggga cactattggt gagggtgtaa aaaaggcagc
    11761 tactgcaatt gttcccaccg agcacgccaa gcagattact aaaacggcag aaatgtcaaa
    11821 caatatgtat gaccccaatt atactccacc acaacttgag caaaaatgga ttggtggctt
    11881 ggttggtaac ggtaaaggaa gaggttttgc cacaggcggc tacaccggca atggtggcaa
    11941 atatgagcct gccggtattg tgcataaggg cgagtatgta atgaccaaag aggcaactgc
    12001 acgcttgggt gtggcaaatc ttaaccggtt aaattatggc aaagttgctg ggctaactgc
    12061 acttgcgtca agtgttgcgt ttgctcaacc aatgcctgcg gtcaaaatcg acagcagacc
    12121 accgctgacg gcaagccaac caagcccaac agttgcaccg gtgtcgcaaa atatccatat
    12181 caccatcaac gccaccggtg ggcaagaccc acaagcaatc gcccgactgg ttgcaatgga
    12241 gttggaaaaa caacaacgcc aagcacaagc aagagcaaga tcgtctttga gagacagggg
    12301 ctaatttgac aaagtagaat gaaaagcgga caatgctcta aattgtccgc tttttatagg
    12361 agcaaatgat gtttaaagaa aaaggatatg atgaatttgt gaatgaatgt gtgcgaaaag
    12421 gtagagaaga acacaaagct ggtttaggat ttacgctaga gcaatctcgc ttacatatca
    12481 aaaaaaccat tgagcaaaaa tcacaagagc taaacgaatt tcagcgtgaa gtggtttatg
    12541 gctaaaatta ccattaaacc acaagcattg agtcaatttg acgagattgt aaaaagtgtt
    12601 atcgaattta ccggttttga aacgagtggt attcgattac aaagtgatat ttttgacaaa
    12661 atagagcaaa ttgcatttat gccactctct ggaagagcaa gagaagatgg gacaagagaa
    12721 actttcgtca gacgttatcg tattgtgtac gattacgata ggcaggcaga tgaagtaatt
    12781 atcttagcta tcattcacag tagccgactt tacccacgcc cataatcagt aagcgaccta
    12841 atcggtcgct ttttctttgc ctgttaaaac ccatttcaca cctcgcattt atacccaaag
    12901 cctttcgcct tttgcaaaat atcctcattt tttaaccgct tgtaattgta aaaatgagtg
    12961 agccaaacca cgccgaacaa atccgccgtt tagacaatat tatccgactt ggcactattg
    13021 ccgaggtgga tttaaccaca gcgactgcac gggtcaattc gggcggtatt acgaccgatt
    13081 tcttaccgtg gctgactttt cgtgccggta catcgcaaac gtggtcagct ccaacagttg
    13141 gcgagcaatg cgtggtgtta agcgtgagtg gtgaatttac cacaggcgtg atcttatttg
    13201 ggatttacac ccaaaacgcc ccgagccaat ccgccgatga gcatctattc cgcttttcgg
    13261 acggtgcaga aatcagctac aacaccgcaa gcggtcaatt aaccgtaaaa aattgcaaag
    13321 tggtgattgt gcaggcgaca gaatctatca cgctcgacac gcccacggtt aaggccacaa
    13381 aaaatgtcgt gattgggggc aacctatccg tgaaaggcac aacctcatcg caaggtgcaa
    13441 tcagcacaca aggggcggta acagcaaaag gcgatgtatc aggggcggga atcagtttag
    13501 gcagccacca tcacattgag caaggtgacg gcagaccaac tagcggagca aaaccataat
    13561 gaaccgagaa acaggcgaac agcttgaaga cgaagtagag catatcaagc agtctatcaa
    13621 agatattttg ctgacggcaa aaggcagtcg ggtaatgcgg cgaacctatg gcagtaatct
    13681 ctacaagcta actgataaac cgattgccgc aagtctgatt atgcaactct ccgctgcgtg
    13741 cgtgatggcg ttgcagcaat gggagccacg tatagcgatc acccgattta aagtggaatt
    13801 tgccgaagat aactacaata agctgatttg caccttagat tttaccctta agcaccgaaa
    13861 aatcagcatc aaaggaatgc gttttacact atgagcgaaa ttgtcgattt atccaaactc
    13921 cccgccccga aagtactgga agaattggac tatgaaacct tactggcaga gcggaaagcc
    13981 aagtttttat ccctctaccc agaaagcgaa cgagcggtaa tggctgcacg gttagcgttg
    14041 gagtctgagc ctatcaccaa gttactacaa gaaaattgct atttgcagct actcgaacgc
    14101 caacgcatta atagtgcggc tcaagccaca atgcttgctt atgctaccgg tacggattta
    14161 gatgtcatcg cagccaactt taatgttgag cggcttgtag tgcaagctga agacttaact
    14221 gcaagcccgc ctatcgtcga agagttagag cctgatgatg atttccgtca gcgtgtgcag
    14281 ttaaaaattg aaagtgtttc ggttgccggt ccacggaagg cttacacctt tcacgccctg
    14341 tctgctaacg gaaaaattgc cgatgtgtcc gtcatatcac cacagccagc ttatgtaacg
    14401 gtaacgctgc tttctcgtga tggcaacgga gccgtagcct cagaaatcat caatgcggcc
    14461 aaaattgctc tcaatgatga agaggttaga ccgattgccg atagagtaac cgtgcaaggg
    14521 gcaagcattg tggaatatga aattaatgcg gtgttgcatc tctaccgtgg acctgagaaa
    14581 gagcctattt taaaagcggc aaaagctaac ttagaggctt acatcaacca aacaaaacgc
    14641 attggacgag atgtgactca ctcaggtatc cacgccgcct tgcacgttgc cggtgtgcaa
    14701 aatgtggaaa ttttgcagcc gagaactgat ttggtgctga caccttacca agccggttat
    14761 tgtgtcaatt acacgctaaa tgttgaggtg agcgatgaat acagttaaag cattattgcc
    14821 acccggttca tcacttttgg aaaaacgagc tgccgaatgt ttgcaacaag cggtacaaaa
    14881 tccgattaaa tttgcaaatt tgattaatcc acacaaatgc cccgtgaaat ttttgcccta
    14941 tcttgcgtgg gccttatcgg tggattattg ggaagagcat tggagtgaag aattaaaaag
    15001 agaaaccatt attcgatctt ttgaagaaca ccgaaagaaa ggcacagcaa gtgcagtgcg
    15061 aagaattgtg gaatctctcg gctatgcttt tgaaatccgt gagtggtttg cggaaaaacg
    15121 gcaacggcag cccgggacgt ttagggtttt tgttgagtta aaagataaag ggattagcga
    15181 aaaaatctac caagaattag aaaggttgat tgaagatgca aaaccggtat caaggcacat
    15241 cacagaatta gcagtatcag ccacctcaaa aggcaaagca aatattttta gtggagcaca
    15301 cagtggcgaa attattacga tttatccacc taaaaagctc cctgttattg tcattaaaag
    15361 caaaatggat ttatttagtg caacaaacag tggcgaaatt attacgattt atcctaataa
    15421 gaggtaaaaa tggaacaaaa atataaaaca atattaaccc atcacggtga gcgagtgatc
    15481 gttgaggctc ttgcaaataa gataccagtg ccacttaagg aaatggctat aggagatggt
    15541 aacgggtcat caataactcc aagtgcatct caaaccacac ttgtaagaga agtttatcgt
    15601 gcggaaatta cagatttgct agaagacccg caaaatcgcc atcagatgat tgctgaatta
    15661 ctaatcccag aaaatgtagg tggatttatt gtccgagaaa tagggttatt tgatgaacaa
    15721 ggtggtttgg ttgctgtagc aaattgccct gaaaattata agcctgtatt agaacaaggc
    15781 agtggtaaag tccaatatta ccgaatgatt ttacaagtta gtagtagtga tgcggtcacc
    15841 ttatcgatta acaataatat tgtttacgcc acaagaactg agtttaacga atttgtaaat
    15901 aacttgagta gtcctgatgg ctataaacac atcggacgct gcaaatctgt agcagaactc
    15961 cgcactat
//
LOCUS       DANLZQ010000056        15837 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.056, whole genome shotgun sequence.
ACCESSION   DANLZQ010000056 DANLZQ010000000
VERSION     DANLZQ010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15837)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15837)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15837
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.056"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(<1..1282)
                     /locus_tag="PXE50_001519"
     CDS             complement(<1..1282)
                     /locus_tag="PXE50_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA binding domain-containing protein"
                     /protein_id="HDL5622431.1"
                     /translation="MQEAYDIQHLCTRKEDKSFDRKSARKEPKEILRHLIGFANADGG
                     LLVIGIEDNGEITGFNYQKAHQPEEFIHALHNLQKMPIPVTYQQIEVVNSRGLADFVL
                     LFEVTASSGRVITSHDDRVFLRSKDQTLELNFEQRLQLEYEKGQRAFEEQPIARADFT
                     DLDMDLLEQYRQKLHTDRSIEEILKARDLINKEGQITNACILLFGNNPTRYFPNARLR
                     FLRYEGKAPLTGRTFNVVKEFMLEEPIPKLLESAKAVLKSQLREFQRLDENGQFTKID
                     EYPEFAWLEGIVNAIAHRSYSNQGDCIRISMFDDRLEIFSPGGLPRPVTLENMYYTRF
                     SRNPKIARVLYEFGWVKELNEGVNRMAEEMNAYQLNTPSYFEPNENAVRLILENNIEH
                     RTLRALERIEEIFTQDIMATLNKNEVTILQYLYEN"
     gene            complement(1382..1786)
                     /locus_tag="PXE50_001520"
     CDS             complement(1382..1786)
                     /locus_tag="PXE50_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005557532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dehydratase"
                     /protein_id="HDL5622432.1"
                     /translation="MHKFTFPIEQIAPLVPHSGNMILLDRITAFGEDFLTAETNIRPD
                     NPLIKHGKLATYASIEIMAQAGEPVRLGYLLGTRKLHLHRQEIPIGSQLQIQIKMSIQ
                     DATGFGVFDCQLIDLADNQVLLEGALNVFSPK"
     gene            complement(1779..3001)
                     /locus_tag="PXE50_001521"
                     /pseudo
     CDS             complement(1779..3001)
                     /locus_tag="PXE50_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005544283.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
     gene            complement(3088..3507)
                     /locus_tag="PXE50_001522"
     CDS             complement(3088..3507)
                     /locus_tag="PXE50_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622433.1"
                     /translation="MLRLLSFCFIFLLSACTVLPQIKQLPPQVESVKSFKVENNGQQS
                     LLLIQFYENKWRWIQTDPLGAPIARVWLTKKGWEPDGFVMPNKQAQLLFTALVNALNP
                     HSPPFYLDKGWKIEREKSQFTIWLPDSSKWKVEILGE"
     gene            complement(3569..4258)
                     /gene="rplA"
                     /locus_tag="PXE50_001523"
     CDS             complement(3569..4258)
                     /gene="rplA"
                     /locus_tag="PXE50_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HDL5622434.1"
                     /translation="MAKLTKKMKAIKAGVDSTKAYDINEAVEVLKKFATAKFVESVDV
                     AVNLGIDSRKSDQNVRGATVLPHGTGRTARVAVFTQGANAEAAKAAGADLVGMEDLAE
                     QIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQ
                     IRYRNDKNGIIHTTIGKADFSAEQLKDNLNALLAALTKAKPTTAKGIFIKKVSISTTM
                     GAGVAVDQASL"
     gene            complement(4263..4691)
                     /gene="rplK"
                     /locus_tag="PXE50_001524"
     CDS             complement(4263..4691)
                     /gene="rplK"
                     /locus_tag="PXE50_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006121495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HDL5622435.1"
                     /translation="MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNA
                     RTESLEKGLPIPVVITVYADKSFTFVTKTPPAAVLLKKAVGIKSGSGKPNKDKVGTVT
                     QEQIRQIAETKAADMTGATIETKMKSIAGTARSMGLIVEE"
     gene            complement(4924..5487)
                     /gene="nusG"
                     /locus_tag="PXE50_001525"
     CDS             complement(4924..5487)
                     /gene="nusG"
                     /locus_tag="PXE50_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HDL5622436.1"
                     /translation="MSEVEVKENGSKRWYVLQAFSGFENRVAVTLREYIKLHKMEEQF
                     GEVLVPTEEVVENVGGKRRKTERKFFPGYVLVEMEMNDDTWHLVKSVPRVMGFIGGTA
                     DRPAPITKREADRILNRVQETAEKPRHRKEFQPGESILVTEGPFADFSGTVEEVDYEK
                     GRLKVSVSIFGRATPVELEFSQVEKQS"
     gene            complement(5489..5902)
                     /gene="secE"
                     /locus_tag="PXE50_001526"
     CDS             complement(5489..5902)
                     /gene="secE"
                     /locus_tag="PXE50_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HDL5622437.1"
                     /translation="MATEIKTKTPEQVEQKGGKSKGANTALWLVAIVFLAVAAVGNAY
                     FSSHFSLIVRVLLLVVLLVGAVALAAITNQGQKAIHFIKESRTELRKIIWPTRPEATQ
                     TTLIVLAMCVVVSLVLWGIDSIIVALITFVTSLRF"
     gene            complement(6015..7037)
                     /locus_tag="PXE50_001527"
     CDS             complement(6015..7037)
                     /locus_tag="PXE50_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDL5622438.1"
                     /translation="MANGTSRNRRSSGRVTLADVAKVVGVGQMTVSRALRTPEMVSEP
                     LRKRIEEAIIELGYIPHFSARQLASAESHNLVIVTTSISSTENTLILSALRKSVADSA
                     LQMVILIADQESWFQELINHAPQAIVFLNLDCPPNVREWIKNSNIPTVEIGAIKKEPI
                     HLSVGIDSHEAMEKMIHFLVKKGYREIGLLSAKQDLSIFKQYLESWHTTLFAHHISPL
                     KIHHVVEDISFSAGATLLTEALLNWEAIDALVFLSDELACGALYEALRRHMSIPKDLA
                     IAGLGGLEVGSISYPKLTTIAIPYEQMGKIAGKQLLTLLSGKTLSAEEMIVKLPTKLV
                     IRDSAA"
     gene            7268..7537
                     /locus_tag="PXE50_001528"
     CDS             7268..7537
                     /locus_tag="PXE50_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005540356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HDL5622439.1"
                     /translation="MKIMAVCGSGLGSSFMMEMNIKKVLAKLGVEAEVSHTDLSSVVA
                     DDADLFVMAKDIAASSNVPKEKLIVVKNIVGLAEFEEKLTAYFNQ"
     gene            7550..8900
                     /locus_tag="PXE50_001529"
                     /pseudo
     CDS             7550..8900
                     /locus_tag="PXE50_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013745980.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIC"
     gene            complement(8995..10143)
                     /gene="dprA"
                     /locus_tag="PXE50_001530"
     CDS             complement(8995..10143)
                     /gene="dprA"
                     /locus_tag="PXE50_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HDL5622440.1"
                     /translation="MAYHYDLLRLLQVPQMGAQRIGRLLAELNFAEFCHYDKLQLKQI
                     GWNEKQIQRWFNPDQKWIDQAMTWSELPNQQIVTLFDENYPFLLKQISTAPPLIYVKG
                     NVESLSLPQIAIVGSRDYSHYGEYWAGQFAAELARHNIIITSGLAIGIDGFAHQKIVM
                     EQGITIAVLGSGLNQVYPARHKKLAEQIVDLGGALVSEFSPNQPPVAENFPRRNRIIS
                     GLSLGTLVIEATLNSGSLITARYALEQGREVFALPNAVQNPYAQGCHKLIKEGALLVE
                     GVEDILEVVASQYQPQQIPLFDESKPTVSTSLQAVKNSEKFAKNLPSLTACQQQIYQH
                     ISLEPMAIDDLAKVTELTIEILLVELLGLELAGVIKQVSGGYVMDNGY"
     gene            10232..10744
                     /gene="def"
                     /locus_tag="PXE50_001531"
     CDS             10232..10744
                     /gene="def"
                     /locus_tag="PXE50_001531"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005621146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HDL5622441.1"
                     /translation="MAILDVVLYPDEKLATVCEPVEQVDEALNRFIDDMFETMYEHEG
                     IGLAAPQVGVLKRVITIDIEGDKTNQVVLINPEILESSGETGIEEGCLSIPGHRALVP
                     RKEKVKVKALNRQGEEIIIDADDLFAICIQHEIDHLNGVLFVDHISNLKRQRIKEKMQ
                     KLKKQIARAK"
     gene            10838..11764
                     /gene="rfaD"
                     /locus_tag="PXE50_001532"
     CDS             10838..11764
                     /gene="rfaD"
                     /locus_tag="PXE50_001532"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HDL5622442.1"
                     /translation="MIIVTGGAGMIGSNIVKALNEIGRKDILVVDNLKNGEKFINLVD
                     LDIADYCDKEDFIASIIAGDDFGEIDAVFHQGACSATTEWDGKYLMQNNYEYSKELLH
                     FCLDRQIPFFYASSAATYGGRSDNFIEKREFEGPLNAYGYSKFLFDEYVRRILPEAES
                     PVCGFKYFNVYGPREQHKGSMASVAFHLNNQMLKGENPKLFAGSEQFLRDFVYVEDVA
                     KVNLWAWQNSISGIFNLGTGKAESFQEVANAVIKYHGKGEIETIPFPDHLKSRYQTFT
                     QADLTNLRAAGYTGTFKTVAEGTAEYMAWLNR"
     gene            complement(11832..12362)
                     /gene="fabA"
                     /locus_tag="PXE50_001533"
     CDS             complement(11832..12362)
                     /gene="fabA"
                     /locus_tag="PXE50_001533"
                     /EC_number="4.2.1.59"
                     /EC_number="5.3.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017807287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-hydroxydecanoyl-ACP
                     dehydratase/trans-2-decenoyl-ACP isomerase"
                     /protein_id="HDL5622443.1"
                     /translation="MNSCTPIIKPSYTYEELLLSGKGELFGEKGPQLPAPPMLMMDRI
                     IEMNQEKGNFEKGYIEAEFDIKPDLWFFNCHFINDPVMPGCLGLDAMWQLVGFYLGWI
                     GGEGKGRALGVGEVKFTGQILPTAKKVTYRIHMKRVVNRKLVMGVADGEVEVDGRVIY
                     TATDLKVGLFQDTTAF"
     gene            complement(12475..14112)
                     /locus_tag="PXE50_001534"
     CDS             complement(12475..14112)
                     /locus_tag="PXE50_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDL5622444.1"
                     /translation="MTLSLLSSQKLVMQNDFSRLDEKLNFLDFQPQAKQALNQFLQSQ
                     FGALLVLKSELFPEFINEITEYLKKYSVDLPIISKMDFNKNSLFGYSVFLERELKTEY
                     VKGAIHEADKGILIVNIRSLLLDITQWDKLKQALLFGEYEPNSVNHSPYLSAKEKSTF
                     KLILVGEREDISTLSAYDDGLYQFGQYTEIKSYLSLSDNVEQWGGYVQNYAENLINKR
                     LTSTALNQFLQAYIRESESRELVSISPTLLRKHLLGIQNFYPNVTEIDEVKGYFDYLE
                     QQSSILNQYTVGDILTNQLYIETEGEEIGQINGLSVIEFEGIPHSFGEPLRMSCNVQY
                     GDGEITDIERKVELGGNIHSKGIIIAQSCLANLLELPTQLPFSASIAFEQSYGEIDGD
                     SSSLAIFNVLVSALAKVGLPQSIAVTGAIDQFGNVLSVGGVNQKIEGFFNICHARQLT
                     GKQGVIIPAACVSHLSLSSEVVEAVEQGLFKIWTVENVFDAIAILFERDFYDDEKAPN
                     SAQTALFTLIHQNLDERESEETSGSFLSKICKKIKLD"
     gene            14205..14651
                     /gene="matP"
                     /locus_tag="PXE50_001535"
     CDS             14205..14651
                     /gene="matP"
                     /locus_tag="PXE50_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010944225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrodomain Ter protein MatP"
                     /protein_id="HDL5622445.1"
                     /translation="MRYQKLITQETTWKWQYLLKKHREGENITKYEEQSLIDLKVQFL
                     STLQNSPDEVEKWIKSEMTPEQRKKMRQSVRAKRKRFFNAEKQTTKKKSIDLEYSSWL
                     RLSKYAKSQKLTLSEAIVKLTDELENKQLYLEQVAKMKSSLKDLLK"
     gene            complement(14717..>15837)
                     /gene="ompA"
                     /locus_tag="PXE50_001536"
     CDS             complement(14717..>15837)
                     /gene="ompA"
                     /locus_tag="PXE50_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_119863613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="porin OmpA"
                     /protein_id="HDL5622446.1"
                     /translation="ALAVLSAAAVAQAAPQANTFYAGAKAGWASFHDGLTQFDNTYDY
                     GSGINLGINLGINRNSVTYGVFGGYQILNQNNFGLATELGYDYFGRVRGNTTFSGDDK
                     EKTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALVRNDYYVQQHVDKDSRIKVHNL
                     KPSLLLGAGLEYAITPELAARVEYQYLNRVGNLDKAVRTTVGYLIPRGTNFQYSPDIH
                     SVSAGLSYRFGQGAAPVEAPEVVTKNFAFSSDVLFDFGKSSLKPAAATSLDAAHAEIS
                     NLGLANLAIQVNGYTDRIGKEASNLKLSQRRAETVANYIVSKGTNPANVTAVGYGEAN
                     PVTGHTCDAVKGRKALIACLAPDRRVEIQVQGSKEVTM"
BASE COUNT         4594 a         3383 c         3042 g         4818 t
ORIGIN      
        1 cattttcata taaatattgc aggatagtaa cttcattttt atttaatgtc gccataatat
       61 cctgcgtaaa aatttcttct attcgttcta atgcccttaa tgtccgatgt tcaatattat
      121 tttctaaaat cagtctgacc gcattttcat tgggttcaaa gtaagaaggt gtattaagtt
      181 ggtaagcgtt catttcctcc gccatacgat taacaccttc attcagctct ttgacccaac
      241 caaattcata cagcactcgt gcaatcttcg gattgcgtga aaaacgggta tagtacatat
      301 tttcaagcgt cacagggcga ggtaatccac ccggactaaa aatttccaaa cggtcatcaa
      361 acatcgaaat gcgaatgcag tccccttgat tactgtaact acggtgtgca atcgcattga
      421 caataccttc taaccaagca aattctggat actcatcaat ttttgtgaat tgcccgtttt
      481 catctaaacg ttggaactct cgtaattggc tttttaatac tgccttagca ctctccaata
      541 acttaggaat aggctcttca agcataaatt ctttgacgac attaaaagtt ctaccggtca
      601 gaggtgcttt accttcatac cgcaaaaaac gcaaacgggc attaggaaaa taacgtgtcg
      661 ggttattccc aaatagcaaa atacaggcat tcgtaatttg cccttctttg ttaattaaat
      721 ctcgggcttt cagaatctct tctattgagc gatctgtgtg taatttctgt cgatactgtt
      781 ctaataaatc catatccaga tcagtaaaat cagcgcgtgc tatcggttgc tcttcaaaag
      841 cacgctgccc tttttcgtac tctaattgca aacgttgttc aaaattgagt tccaaagttt
      901 gatcttttga gcgtagaaaa acccgatcat cgtgagaggt aatcaccctc ccactcgaag
      961 ctgtaacttc aaataataag acaaaatccg ctaaacctcg actatttacc acctcaattt
     1021 gctgataggt caccggtatc ggcatttttt gtaaattgtg cagagcgtgg ataaattctt
     1081 ccggctgatg ggctttttgg tagttaaaac cggtaatttc gccattatct tcaataccaa
     1141 taactaataa accgccgtct gcattcgcaa aaccaatcaa atgccgcaaa atctctttcg
     1201 gttcttttct cgcacttttg cgatcaaagg atttatcttc tttgcgagta caaagatgtt
     1261 gaatgtcata ggcctcttgc ataacgaatt tcctaccaac tactaccaac tactaccaac
     1321 tactaccaac tactacttac tactacttac tactacttac tactacttac tactaccaac
     1381 tctatttcgg actaaacaca ttcagcgccc cttctaaaag cacttggttg tcggctaaat
     1441 cgatcagttg gcagtcgaat acgccgaagc cggtggcatc ttgaatagac attttgatct
     1501 gaatttgtag ctgtgagcca atcgggattt cttggcggtg gaggtgcagt ttgcgagtgc
     1561 cgagcaggta gcctaagcga actggttcgc cggcttgtgc cataatttca atgctggcgt
     1621 aggtggcaag ttttccgtgt ttgatcagcg gattgtcagg gcgaatattg gtttcagcgg
     1681 tcaaaaaatc ctcgccgaat gcggtaatgc ggtcgagtag gatcatattg ccactgtgag
     1741 gaaccaatgg tgcaatttgt tcgataggga aggtgaattt atgcatcgct ttctcccaaa
     1801 atcagtacgc tgttattgcc gccaaaggca aaagagctgc ttgcgccaat ccgtctgcct
     1861 gctgcccaac ggctctgttc atcggtgatc gcaatgttcg gcaggttttc gtccgcttgt
     1921 ttatcccata attgcgcagg gagcttgccg gtcgggttgt gttggcgaca gagcattccc
     1981 cacaaaattg ccgcttccac cgcaccggca gcccaagggt atgcccggtg tagggtttgg
     2041 tggtggtgca agcggtctga ttaccgaaga tttttgccac agcgaggctt tccatttgat
     2101 cgttatgaag cgtccctgtg ccgtgcaggt tgatccagcc gatgtcggct gcgtctaaat
     2161 cagcattgtg cagggcattt tggaaagcgg aaattgcccc ttccccttcg gggtgaggtg
     2221 aggacatatg gtaagcgtcc gagctggaac cataacccag taactgaatg cgatgttcgt
     2281 ccagtggttc acggctcatc acaaacaccg ctgcgccttc gccgatgtta atgccgttac
     2341 ggttagcgga aaatgggttg gtttgttggt ttgataacac ttccagcgag ctaaatccgc
     2401 tgatagttaa aggcgaaagg gtatccacac caccgcaaat caccgcatcg cacaagccgg
     2461 ctttcagtaa acgggcagca gaaattaacg ctcttgcctc tgaggtgcag gcggtggaaa
     2521 tgccgtaact cagccccgtt aagccataca cttcggcaac gaaatcagac ggcgcagaga
     2581 agagaatttg ctgttgatta aactgctcgg tggcataatc gccctgcaca ccggctttga
     2641 agacgggaat attttcatcg gcgccggtag tggacgtgcc gatgatcacc gcaatccgct
     2701 cacgcccgaa ttgctcgata caagcggtaa ttttcggctc aatttctgca agggcgtgcc
     2761 atagcagttg gttattgcgg ctgcggtgtt caatagatag ttcaacagga aaatcacgca
     2821 atctagcaga gacttgccct agaaatttcg gtgaactatt tgaaatatta tgtcgtaaat
     2881 aaggctgtga agtcgtatct aaaggagata ctttcgcatt aattaaaaca ttcaaatgct
     2941 ccacgatgcc atatccaatc ggactggtga tggcgggctc tgataaatat agtgtcatta
     3001 ttatttattc cagtattatt gtgtaatggc actaaaatta taaaattcat attcaagtga
     3061 ttcaagcata gaggttcaag ttttcgctta ttcccccaat atttccactt tccatttact
     3121 gctatctggt agccaaatcg taaattggga tttttccctc tcaattttcc aacctttatc
     3181 taaataaaaa ggtggagaat gagggtttaa tgcattgact aaagctgtaa ataatagctg
     3241 tgcctgctta tttggcatta caaagccatc tggctcccaa ccttttttag taagccatac
     3301 tctggcaata ggagcaccta aaggatcagt ttgaatccaa cgccatttat tttcataaaa
     3361 ttgaattaga agcaaacttt gctggccatt attttcaact ttaaaggatt ttacagattc
     3421 aacctgtggc ggtaattgct taatttgagg taatacagta caagcactaa gcaaaaaaat
     3481 aaagcaaaaa gataataatc ttaacattcg tacctaaaga aaaagaccgt agagtattaa
     3541 cactacggtc ttttgattct attaaaaatt aaagtgatgc ttgatcaacc gcaacaccag
     3601 cacccattgt agtagagatg cttactttct tgatgaagat accttttgct gttgttggtt
     3661 ttgcttttgt taaagcagct aacaatgcgt ttaagttatc ttttaattgt tcagctgaga
     3721 agtctgcttt accgatagta gtgtggataa taccgttttt gtcgttacgg tagcggatct
     3781 gaccagattt cgcattttta accgcttctg caacgtttgg tgttactgta cctactttcg
     3841 ggtttggcat taagccgcgt ggacctaata cttgacctaa ttgacctaca acacgcattg
     3901 catctggaga agcgataaca acatcaaagt tcatttcgcc tttcttgatt tgctctgcaa
     3961 gatcttccat acccactaag tcagcacccg ctgcttttgc tgcttctgcg tttgcacctt
     4021 gtgtaaacac agcaacacga gcggtacggc ctgtaccgtg tggtaatacg gttgcaccac
     4081 gcacgttttg gtctgattta cgagaatcga tacctaagtt tacagcaacg tccacgctct
     4141 caacgaattt agcggttgcg aattttttta acacttcaac tgcttcgttg atgtcataag
     4201 ctttagtaga atctacgcca gctttaattg ctttcatttt tttagtcaat ttagccattg
     4261 tattattcct ctacgattaa gcccattgag cgagctgtac cagcgattga tttcattttg
     4321 gtttcgatag tcgcaccagt catatctgct gctttagttt cagcgatttg acggatttgc
     4381 tcttgagtta ctgtacccac tttatctttg ttcggtttac cagaaccaga tttgatacct
     4441 accgcttttt tcagtagcac tgccgccggt ggagttttgg taacgaatgt gaaagattta
     4501 tcagcgtaaa ctgtgataac aaccggaatc ggtaaacctt tctctaagct ctcagtacga
     4561 gcgttgaatg ctttacagaa ttccataatg ttaacacctt gttgacctaa tgcaggacca
     4621 accggtggtg atgggttagc catacccgct gcaacttgca gtttaacgta ggcttggact
     4681 ttttttgcca ttttaatttt cctctaaatg ggtgataacg ctgaaaatca gctcccctgt
     4741 tacataaaaa atacgagtca gcaggctggc tcgtaatagg tcgcaaattt taaagaattt
     4801 gcgactattt ttcaagcaaa actttcgctt tgttgaataa atcttgttac aagcggtctt
     4861 ttttccgctg aattttgcaa aaaattgaga aaaataaccg cttgtgtgtg aaattaattg
     4921 aaattagctc tgcttttcca cttgactgaa ttctaattct accggtgtcg cacgaccaaa
     4981 aatcgacacc gatactttta agcgaccttt ttcgtaatcc acttcttcga ccgtaccgga
     5041 gaaatctgca aacggacctt ctgtaaccaa aatgctttcg cccggttgga attcttttct
     5101 gtggcgtggt ttttccgctg tttcttgtac acggtttaga atgcggtctg cttcacgttt
     5161 ggtaattggt gcggggcgat ctgccgtacc accaataaag cccattacac gaggcacact
     5221 tttcactaaa tgccaagtat cgtcattcat ttccatttca accaatacat aacctgggaa
     5281 gaatttacgc tcggttttac ggcgtttacc gcccacattt tcaacgactt cttcggttgg
     5341 cactaatact tcaccaaact gctcttccat tttgtgaagc ttaatgtatt cacgcaatgt
     5401 tactgccaca cggttttcaa agcctgaaaa cgcttgtaat acataccagc gttttgagcc
     5461 attttctttc acttctactt cactcatttt agaaccttaa acttgttaca aatgtaatta
     5521 atgcgacgat gattgagtca ataccccata aaaccaagga aactactacg cacattgcca
     5581 atacaatcaa ggtggtttgt gttgcttcag ggcgtgtcgg ccagataatt ttgcgtagtt
     5641 cggttcgaga ctctttaata aaatgaattg ccttttgccc ctgatttgta attgccgcta
     5701 gtgcaacagc accaactagc aacaccacca ataaaagcac tcgaacaatt aatgaaaaat
     5761 gagatgaaaa ataggcatta cctaccgcag caactgctaa aaatacaatc gcaaccagcc
     5821 ataatgctgt atttgcacct ttgcttttcc cccctttttg ttcgacttgc tcgggggttt
     5881 ttgttttaat ctcagtagcc atatataacc taaaaaatga ataaaaaaat cagaaattat
     5941 tttaaagcgt taaattctat cattttctac aagacttgcc acgatctttt atagattttt
     6001 atgcaaaatc aatattatgc ggcgctatca cgaatcacta gcttagtcgg taatttaaca
     6061 atcatctctt ctgctgataa ggttttacca ctcaaaagag taagtagttg tttacctgct
     6121 atttttccca tttgctcgta agggatcgca atggttgtca atttagggta ggaaatactc
     6181 cccacttcta aaccacctaa accggcaatc gcaagatctt ttggaatgct catatgtcgg
     6241 cgtaatgctt catataatgc tccgcaagcc aattcatcgg ataaaaaaac caatgcatct
     6301 attgcttccc aatttagaag ggcttcagtc aacaaagttg ctcctgccga aaacgaaata
     6361 tcctctacta cgtggtggat ttttaaagga gaaatatgat gtgcaaataa agtcgtatgc
     6421 caactttcta aatattgttt gaagatggat aaatcttgct tcgccgataa caatccaatc
     6481 tctcgatagc cttttttcac caaaaaatgg atcattttct ccattgcttc gtggctatca
     6541 attccaacac tgagatgaat cggttctttt tttatcgcac ctatttctac ggtagggata
     6601 ttgctgtttt taatccactc acggacatta ggagggcaat ctaaattcaa aaacactatc
     6661 gcttgaggag catgattaat cagttcttga aaccaagatt cttgatcagc gatcaaaatc
     6721 accatttgca atgcggaatc cgccacgctt ttgcgtaatg ccgataaaat taaggtattt
     6781 tccgttgagc taatcgacgt cgtcacaatg accaaattat gtgattctgc agaagctaat
     6841 tgccgagcag aaaaatgcgg aatatatcct agttcaatga ttgcctcttc aatccgttta
     6901 cgtagtggct ccgacaccat ttctggtgta cgcaaagcac gagataccgt catctgccca
     6961 acaccaacaa ctttggctac atcagctaaa gtgactctgc ccgaagatct tcgatttcta
     7021 cttgttccat ttgccatact attttcctaa ttgttccata ttatagggct aaatccttaa
     7081 ttttcctatt tagaaagaac agagcaaaat gccaactgat tattttttat ctaattaaat
     7141 actaaaaatg ttaacgctat cacattttta atattttctg tttgatagcg ttaacatttc
     7201 tattctatag tatttctata gttcaaaatt cagacaacta ttcattcacc tttaatggag
     7261 atttactatg aaaattatgg cagtatgtgg ttccggctta ggtagcagct ttatgatgga
     7321 aatgaacatt aaaaaagtat tggcaaaact cggtgtcgaa gcggaagtga gtcataccga
     7381 cctttcctct gttgttgctg atgatgctga tttatttgtg atggcaaaag atattgccgc
     7441 aagcagcaat gtgccgaaag aaaaactcat cgtggtaaaa aacattgttg gattagcaga
     7501 attcgaagaa aaattgaccg cttactttaa ccaataacgg agatgttata tggaatcgct
     7561 actctttttt atattagata ttctcaaagt gccttccgtt ctagtgggtt taattgctct
     7621 ggtcggttta gttgcacaga aaaaatcggt atccgatatt gttaaaggaa caatcaaaac
     7681 tattttaggc ttcttagtgt taagcggtgg tgcaacagta cttttaagct ccctgactcc
     7741 tttaggcggt atgtttgaac acgccttcaa cgtgcaaggc attatcccta ataacgaagc
     7801 gattgtgtct atggcaatcg aaaaatatgg tacggcgact gcgttaatta tggcattcgg
     7861 tatggtagcc aatattttaa ttgcacgttt tacccgccta aaattcattt tcttaaccgg
     7921 acaccatacc ttctatatgg cgtgtatgat cggcgtaatc ctaaccgttg ccggctttga
     7981 aggtattcag ctcgtctttg tcggggcatt aaccttaggg ttaattatgt ttcccgacta
     8041 tcgctcactt ctatatgaaa aaagtgaccg ctagcaatga tgttgcctta ggtcatttcg
     8101 gcacattggg ctacgtgctt gctggttcaa tcgggcaact ggtaggaaaa ggctctaaat
     8161 ctaccgaaga aatggattta cctaaaaacc tcggcttctt acgtgatagc tccatttcta
     8221 tttcactcac gatgatggcg atttactata ttctcgccct tgcttcgggc agtgaatacg
     8281 tttctacatt aagcggcgga caacattatt tagtgtatgc caccattcaa gccatcactt
     8341 ttgcagccgg tgtttatgtc attttgcaag gggttcgttt aattttagcc gagatcgtcc
     8401 cggcatttac cggcttctcc gaaaaattag tacctgatgc caaaccggct ctcgactgcc
     8461 cgattgtttt cccttacgcc cccaatgcgg tattagttgg atttcttgcc agtttcttag
     8521 gtgggatttt aagcttagcc attctagggc aacttaattg ggtgttaatt ttaccgggcg
     8581 tagtgccaca cttcttctgt ggggcaactg ccggcgtatt tgggaacgcc accggcgggc
     8641 gtcgtggtgc aattatcggt gcttttattc acggcatatt aattaccttc ttgcctgtat
     8701 tcttattacc tgtactgggt tcattaggct ttgctaacac cactttctct gactcagact
     8761 tcggcggtat tgggattgtg ttaggctata tggctcaata cttcgacaag aatatcatta
     8821 cgctcattat tgtcggctta ttcgctctgt tggtagccta taattatttg gcgaaaaaac
     8881 cggcaaaact gaatacctaa ttaaaatcag gtgttatttg ctgcctgcga ggaatcttcc
     8941 ctgccatttc ttgatggtag ggaattttgt ttagttaaac gacaacgctc ttgttcaata
     9001 cccattatcc atcacatacc ccccactcac ttgtttaatc acaccggcta attccagacc
     9061 cagtaattca accagcaata tttcaatcgt caactccgta actttggcta aatcatcaat
     9121 tgccatcggc tctaagctga tatgctgata aatttgctgc tggcaagcgg tcagacttgg
     9181 cagatttttt gcgaattttt cgctgttttt gaccgcttgt aaagatgtgc ttactgttgg
     9241 cttagactca tcaaacaaag ggatttgctg aggttgatat tgcgaggcga ccacctctaa
     9301 aatatcttcc acaccttcca cgagcaatgc cccttcttta attagcttgt ggcaaccttg
     9361 tgcgtaaggg ttttgtaccg cattcggtaa cgcaaacact tccctacctt gttcaagggc
     9421 ataacgagcg gtaatcagtg aaccactatt aagcgttgct tcaataacta aagtgccgag
     9481 cgataagcca ctaataattc gattacgacg aggaaaattt tctgccaccg gcggctgatt
     9541 aggcgagaac tccgacacca atgcaccacc taaatcaaca atttgttcgg ctaatttttt
     9601 atggcgagca ggatagactt gatttaatcc actccctaac acggcaatcg ttatgccttg
     9661 ttccataacg attttttgat gggcaaaacc gtcaatacca atggctaaac cgctggtaat
     9721 gataatatta tggcgagcta attcggcagc aaattgccca gcccaatatt caccataatg
     9781 agaatagtct cggctgccaa caatcgcaat ttgtggcaga gaaaggcttt ccacatttcc
     9841 ctttacataa attaacggtg gcgcagtcga aatttgtttt aagagaaacg gataattttc
     9901 atcaaagagt gtcacaattt gctgatttgg caattctgac caagtcatcg cctgatcaat
     9961 ccacttttga tcaggattaa accaacgttg aatttgcttt tcattccaac ctatttgttt
    10021 gagttgaagt ttgtcatagt ggcaaaattc agcaaaattg agttccgcca ataatcgccc
    10081 tatacgttga gcccccattt gcggcacttg taataatcgt aataaatcgt agtgatatgc
    10141 catattttca tcctcaaaat ttccctaata ataagaaaag gtttaaaata gccaaacgaa
    10201 ttttttaaac ttttcgagag agatcacaaa aatggcaata ttagatgttg tgctttaccc
    10261 cgatgagaaa ctggcaaccg tttgtgaacc ggtggaacag gtggacgaag cactgaatcg
    10321 ttttatcgat gatatgtttg agacaatgta cgaacacgaa ggtattggct tagctgcacc
    10381 gcaagtgggc gtacttaagc gtgttattac tattgatatt gagggcgaca aaaccaatca
    10441 agtggtgtta attaaccctg aaattttaga aagcagcggt gaaaccggca ttgaagaggg
    10501 ctgtctctcc attcccgggc atcgtgcctt agtgccacgc aaagagaaag tgaaagtcaa
    10561 agcccttaac cgccaaggcg aagaaattat catcgatgcc gatgatttat ttgcgatttg
    10621 tattcaacac gaaatcgacc atttaaacgg cgtgcttttt gttgaccaca tatccaattt
    10681 aaaacgccaa cgcatcaaag aaaaaatgca aaaattgaaa aagcaaattg cacgagcgaa
    10741 ataaccaggc acaagcggtt aaaatggctt aaaaatttgc aaattaagtg tgatgacacg
    10801 ataataacca cagttcaact ttagaaagga taaaaatatg attatcgtca ccggcggcgc
    10861 aggtatgatt ggcagtaaca ttgttaaagc cttaaatgaa atcggtcgca aagatatttt
    10921 agtagtagat aacctcaaaa acggggaaaa atttatcaac ttagtggact tagatattgc
    10981 ggattattgc gataaagagg atttcatcgc ctctattatc gccggcgatg attttggtga
    11041 gattgatgcg gttttccatc aaggggcttg ctcggcaacc accgaatggg acggcaaata
    11101 cttaatgcaa aataactacg aatattcaaa agagttattg catttttgct tagatcgcca
    11161 aattcctttc ttctatgcct caagtgcggc aacctatggc ggacgttcgg ataattttat
    11221 cgagaaacgg gagtttgaag gtccattaaa tgcttatggc tactccaaat tcctgtttga
    11281 tgaatatgtc cgccgtattt tgcctgaggc agaatcaccg gtctgtggtt tcaaatattt
    11341 caacgtatac gggcctcgtg agcaacacaa aggttcaatg gcaagcgtgg cattccactt
    11401 aaacaaccag atgttaaaag gggaaaatcc aaaactattt gccggctcag agcagttctt
    11461 gcgtgatttt gtttatgtgg aagatgtggc aaaagtgaat ctttgggcgt ggcaaaacag
    11521 catttctggc attttcaacc tcggcaccgg aaaagcggaa tctttccaag aagttgcgaa
    11581 tgcggttatc aaataccacg gcaaaggcga aattgaaacc atcccattcc cggatcattt
    11641 aaaatcccgc taccaaacgt tcactcaagc ggacttaacc aacctaagag ccgctggcta
    11701 cacaggcaca tttaaaaccg ttgctgaagg aacagcggaa tatatggcgt ggttgaatcg
    11761 ctaatcaaac gttgttaaaa aagcagaaag agctacgaaa tgtagctctt tttgttataa
    11821 ggttataagg attagaatgc tgtcgtatct tggaataagc ctacttttaa atcagtagca
    11881 gtatagatca ctcgcccgtc cacttcgact tcaccatcag caacccccat cactaactta
    11941 cgattgacca cacgtttcat atggatacgg taagtaactt ttttcgctgt cggtaaaatt
    12001 tgtccggtga attttacttc acctacgccc aatgcacgcc ctttgccttc gccaccaatc
    12061 cagccgagat aaaaaccaac cagttgccac atcgcatcta agcctaagca acccggcatt
    12121 acaggatcgt taataaaatg gcagttaaaa aaccataaat ccggtttaat atcaaactca
    12181 gcttcaatat accctttttc aaaattgcct ttttcttggt tcatttcaat gatgcgatcc
    12241 atcattaaca tcggtggagc cggcaattga ggcccttttt caccgaataa ttctcctttt
    12301 cctgatagca aaagctcttc gtaagtatag cttggtttga taattggtgt acaactgttc
    12361 attattttta aaatcctgta aagtgaaaaa agcctgttat atcaataact gataaatcag
    12421 gctgatagta acagactttt aattcagtga acagttgtaa gctgacttgt cggatcagtc
    12481 tagctttatc tttttgcaaa ttttgcttaa aaatgaaccg cttgtttctt cactttcccg
    12541 ctcatctaga ttctggtgaa tcaaggtaaa taatgctgtt tgggctgagt taggggcttt
    12601 ctcatcatca taaaaatccc gctcaaacag aatcgctatg gcatcaaaca cattttccac
    12661 cgtccaaatt ttaaatagac cttgctccac tgcctcaaca acttctgaac ttaaactcaa
    12721 atggctaaca caggccgccg gaataatcac accttgtttc cccgttaatt ggcgagcgtg
    12781 acaaatatta aagaagcctt caattttctg atttaccccg cccacgctta gcacattccc
    12841 aaattgatcg atagcacctg tcaccgcaat agattgtggc aagccaactt tagctaaggc
    12901 actcactagt acattgaaaa tcgcaagaga agaactatcc ccatcaattt caccatagga
    12961 ttgttcaaaa gcaatcgaag ctgaaaacgg taactgggtt ggtagttcta acagattcgc
    13021 taaacaagat tgagcgataa taataccttt ggagtggata tttcccccta gctccacttt
    13081 acgctcaata tctgtaattt cgccatcacc atattgtaca ttacaactca tgcgtaaggg
    13141 ctcgccaaaa ctatgcggaa tgccttcaaa ctcaatgacc gataagccat tgatctgccc
    13201 aatttcctct ccttcggttt caatataaag ttgattagtc agaatatcac ccaccgtata
    13261 ttgatttaat atcgatgatt gctgttctaa ataatcaaaa taacctttta cctcgtcaat
    13321 ttcggtcaca tttgggtaaa aattttgaat tcctaataaa tgttttctca ataatgtagg
    13381 ggaaatagac accaactctc ggctttcact ttcacgtata taggcctgta aaaattgatt
    13441 aagcgctgtg gaagttaatc gcttattgat gagattctca gcataattct gaacataacc
    13501 tccccactgc tccacattat ccgataatga taagtaggat tttatttcgg tatattgccc
    13561 aaattggtac aacccatcat cataagcaga taaagtagaa atatcttctc tttcccctac
    13621 taaaatcaat ttaaatgttg atttctcttt agccgataaa tagggtgagt gattaacaga
    13681 atttggctca tattcaccaa ataataatgc ctgttttagc ttatcccatt gggtaatatc
    13741 caataagagc gaacggatat taacaattaa aattccctta tctgcctcgt gaattgcacc
    13801 tttaacatat tctgttttca gctctctttc caaaaacaca gaataaccaa atagactatt
    13861 tttattgaaa tccattttgc taataatcgg cagatctaca ctatattttt tcagatattc
    13921 cgtgatttca ttgataaatt ccggaaaaag ctcagatttt aagactaata aagcaccaaa
    13981 ctgagattgt aaaaattgat ttaacgcttg ttttgcttga ggttgaaaat ctaaaaaatt
    14041 caatttctca tctaaacgag agaaatcatt ttgcattact aatttttggc tactaagtaa
    14101 agaaagggtc acaaatctgc ctcattattg aaaatttggt ttattataca aaattccgct
    14161 atacttgcta aatatagctt actttttcct atcatattca gattatgcga tatcagaaac
    14221 tcatcaccca agaaacaact tggaaatggc aatatctcct aaaaaaacat cgtgaaggag
    14281 aaaatattac taagtacgaa gaacaaagct tgatcgattt aaaagttcag ttcctctcta
    14341 ctttgcaaaa ctctccggac gaagtggaaa aatggattaa gtcggaaatg acgcctgagc
    14401 aacgtaagaa aatgcgtcaa tcagtacgcg ccaaacgcaa acgcttcttt aatgctgaaa
    14461 agcaaacaac caagaaaaaa tccattgatt tagagtattc gagctggtta aggctctcta
    14521 aatatgccaa aagccaaaaa ctaacgcttt ctgaagctat tgtcaaatta accgatgaac
    14581 tcgaaaataa acaactttac ttagagcaag ttgctaaaat gaaatcaagt ttaaaagatt
    14641 tactgaaata aaaaaagaaa aaagcccact aacaagcggg ctttttttga ttcaattttt
    14701 caactgaata actatattac atagttactt cttttgaacc ttgaacttgg atttcaacac
    14761 gacgatctgg tgctaagcaa gcgattaatg ctttacgacc tttaactgca tcacatgtgt
    14821 gaccagttac tgggtttgct tcaccgtaac ctacagctgt tacattagct gggttagtac
    14881 ctttagaaac gatgtaatta gctactgttt cagcacgacg ttgtgaaagt tttaagttag
    14941 atgcttcttt accgatgcgg tctgtgtaac cattaacttg gatagctagg tttgctaagc
    15001 ctaagttgct gatttcagcg tgtgctgcat ctaaagaagt tgctgctgct ggttttaagc
    15061 ttgatttacc gaaatcaaat aaaacatcag agctgaatgc gaagttttta gttacaactt
    15121 ctggtgcttc aactggtgct gcaccttgac cgaaacggta tgataaacct gcagatactg
    15181 agtggatatc tgggctgtat tggaaatttg tacctcttgg tattagataa ccaactgttg
    15241 tacgaactgc cttatctaag ttaccaacac gatttaagta ttgatattca acacgagcag
    15301 ctaattcagg agtaattgca tactcaagac cagcacctaa taatagagat ggttttaagt
    15361 tgtgaacttt aatgcgtgaa tctttatcta catgttgttg tacgtagtaa tcgttgcgaa
    15421 ctaatgcaac acctacttta ccgtaaacat ctaagttagg aacaacttcg tagcttggtt
    15481 ttaagcttaa gtgcgcaccg tgagctgaat gtttagccgc agttttttct ttatcatcac
    15541 cagaaaatgt agtgttacca cgaacacgac caaagtagtc ataacctaat tctgtcgcta
    15601 aaccaaagtt gttttggttt aagatttggt aaccaccgaa tacaccgtaa gttacagagt
    15661 tacggttaat accgaggtta ataccgaggt taataccgga tccataatca tatgtgttgt
    15721 caaattgagt taaaccgtcg tggaatgatg cccaaccagc tttagcacct gcgtagaaag
    15781 tgttagcttg tggagctgct tgagctactg cagctgctga taatactgct aatgcaa
//
LOCUS       DANLZQ010000057        15608 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.057, whole genome shotgun sequence.
ACCESSION   DANLZQ010000057 DANLZQ010000000
VERSION     DANLZQ010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15608)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15608)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15608
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.057"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            177..554
                     /locus_tag="PXE50_001537"
     CDS             177..554
                     /locus_tag="PXE50_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YacL family protein"
                     /protein_id="HDL5622447.1"
                     /translation="MEYQFTHSIHGVVAKCSMDHEAFARWLNAEITENPSQLAPIFAE
                     IEKCRAAFPNHYECVFEGREYSLYFDYDEVMAKANNLDAAFDDEEMEEGFQFYNEESI
                     AFCGLDDFEKFLKAYQHFVQTYH"
     gene            643..1230
                     /gene="yihI"
                     /locus_tag="PXE50_001538"
     CDS             643..1230
                     /gene="yihI"
                     /locus_tag="PXE50_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Der GTPase-activating protein YihI"
                     /protein_id="HDL5622448.1"
                     /translation="MSRTKKTRRITDIMPARKTDKPKQPMPKLGGGKNRKLTRYELDA
                     QAREEKRKRKHKGLPTGSRNADPAEQKKAVVKEVKDPRIGSRKKVPLMVEFVNQPEKG
                     RTIKAVPVEPIKPTLSPEQELEQLENNECLNQLLDDLEAGKTLSAEDQKFMNECLDRI
                     DELMTELGIEYEDEEGDNGDALLRQFETMDINKFR"
     gene            1244..1711
                     /locus_tag="PXE50_001539"
     CDS             1244..1711
                     /locus_tag="PXE50_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2489 domain-containing protein"
                     /protein_id="HDL5622449.1"
                     /translation="MLRIFLMVLAALILISLGGYALHLMLKVRAQKKHEQALIEQAKQ
                     AQKDRYIRILDSIEVIARAMISEQCDFSEGVLRLKPLLDVLGRKLSDYTAMWALYGVV
                     ENMPILDERKNLKRNERMKLDLEREAKEAELESDIKNECYQLLKDIEEMRKAI"
     gene            1711..3078
                     /gene="hemN"
                     /locus_tag="PXE50_001540"
     CDS             1711..3078
                     /gene="hemN"
                     /locus_tag="PXE50_001540"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HDL5622450.1"
                     /translation="MSEIIWDLALIQKYNHSGPRYTSYPTALEFNENYTNEDFIRAAA
                     RYPERPLSLYVHIPFCHKLCYFCGCNKVITRHRHKVEIYLDYLEREIKTRAPLFQNRL
                     VTQIHWGGGTPTYLDEDQSARLMQMLRANFDVSDDAEISIEMDPREIELSMLDHLRAI
                     GFNRLSMGIQDFDKEVQRLVNREQDEEFIFALMKRAKELGFVSTNVDLIYGLPKQNVE
                     SFMYTLKRVVELNPDRMSVFNYAHLPSRFAAQVKIKEELLPAPETKLTILQNSIEFLG
                     KNGYKFIGMDHFAKPDDELAIAQEKGILHRNFQGYTTQEECDLLGMGVSAISLLGDTY
                     AQNRKELQQYYADVETNGIALHKGIALTQDDCIRRDVIKALICNFKLDFATIEKQYGI
                     DFKRYFAEDLAFLAPLAEDELLTMNDDSIVVSPRGRLLIRNICLCFDVYSRQLARRQQ
                     FSRII"
     gene            3152..5485
                     /gene="lptD"
                     /locus_tag="PXE50_001541"
     CDS             3152..5485
                     /gene="lptD"
                     /locus_tag="PXE50_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly protein LptD"
                     /protein_id="HDL5622451.1"
                     /translation="MKQRYSLLSLAVMAACYSNSAAADLKQQCLLGVPHFQGEVVEGD
                     QLRMPVTIEADSAVINQPRDATYTGDVTIKQGNRSIWADQVRVEQDGENARMAYLQGN
                     FNYQDNLIQATGSDATINLLSKDANLANANYQLIGRQGRGTAESGEFGNSKHTLKNAS
                     FTSCLPNDNSWQIEANEMIQHVDEEYAEMWHARFKVLGMPVFYSPYLQFPIGDRRRSG
                     LLIPSFERSSKNGWTYSQPFYWNIAPNMDSTITPTYYSRRGWQISPEFRYLTKIGQGL
                     VATEYMAKDRLSEYQPGNDDRKRYLFHWRHAMSFLTDWRFSVDYTKVSDRRYFSDFDS
                     DYGSSTDGYATQNFKLGYYQPNYNISISGKKFQTFDELDIGPYRVLPQIDFNYYKNDL
                     IKGGDFKFFAQAARFENDSKLMPKAWRFHAEPTLNFPLANRYGSLNLETKLYATYYQQ
                     TKGSESTEEIKKSVSRVLPQIKLDFKTVLESDKQLFSGYTQTLEPRVQYIYRPYKDQS
                     DIGSKAHRSVSLGYDSALLQNDYFSLFNDRRYSGLDRISSANLVTAGGTTRFFKEATG
                     EEVFNFSLGQTYYISPSKIDDTSDNSTKGHTTSWAAESNWKFHKNWNWHGSYQYDTRL
                     NQTALANMSLQYKPQSDKLIQLNYRYASKDYINQNLNTNKYGQSIKQVGGVLGWELTD
                     KVSVMTSYYHDLALKKPVEGQISLNYNTCCWAANVYVARRLVSTPVGSSDTINDFYYD
                     NKFGINFELRFGTNYSNGVTRMLKRGIIPYTEPYSIN"
     gene            complement(5627..8266)
                     /gene="ppc"
                     /locus_tag="PXE50_001542"
     CDS             complement(5627..8266)
                     /gene="ppc"
                     /locus_tag="PXE50_001542"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HDL5622452.1"
                     /translation="MNQQYSTIQHNIHMLGEFLGETIRDAQGNYILELIESIRVLSRN
                     SRAGDENAREQLLDKLANISNDDVLPVARAFSHFLNLTNIAEQHQTVSRHHIDESLGS
                     RSLDSLFLRLKSQNIPVEKVIKTVESLMIDLVLTAHPTEVTRRSLGHKHVEINKCLNL
                     LEHDDLTEAESYKIKRRLMQLIALAWHTNEIRTQRPTPVDEAKGGMAVIENSLWKAVP
                     EFCRQLNFYLEKHFGVQYPVNLAPVRFSSWMGGDRDGNPFVTAETTRRVLRMNRWKAT
                     ELFLQDIKNLAEELSITQCTPAFRAKYGNHLEPYRVLLKVLRQKLINTEIYYAELLEG
                     KISTIDESDILTSDQQLWEPLFDCYESLQACGMRIIANGALLDCLRRINCFGLGLSRL
                     DIRQESTRHEMAIAEITRYIGLGDYAHWTEDDKQAFLVRELSSRRPLIPTNWTPSPET
                     KEVLDTCKIVAEQPEGVISAYVISMAREASDVLSVHLLLKEAGCKFTIPVAPLFETLG
                     DLDHSEKVMTDLFNIGWYRGVINNYQMIMIGYSDSAKDAGMLAAGWAQYRAQEALVNL
                     CEKYNIELTLFHGRGGTIGRGGAPAHAALLSQPPRSLKNGLRVTEQGEMIRFKLGLPA
                     VAVESLELYASAILEANIFPPPEPKQQWRDVLAKASDISCQIYRDMVRGELDFVPYFR
                     SATPEQELSRLPLGSRPAKRNPKGGVESLRAIPWIFAWMQNRLMLPAWLGAGQALQQL
                     IDEGNETLLKEMCNEWPFFSTRIGMLEMVFSKADIWLAEYYDQRLVEPKLHRLGNMLR
                     TQLQADLKTVLALAHDGQLMADLPWIAESIALRNIYTDPLNLLQVELLDRIRKQGENA
                     DPVLEQALMITITGIAAGMRNTG"
     gene            8391..9359
                     /locus_tag="PXE50_001543"
     CDS             8391..9359
                     /locus_tag="PXE50_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS1 family transporter"
                     /protein_id="HDL5622453.1"
                     /translation="MCLKLLFGFDNLPVVYVLFTVIQVGLSINGFKGIKWLENVSCVF
                     LIGILAYMLYVVNTKFSVEIGERFANIEGTWGMPFWAATTAFLGIYSTMILNASDYSR
                     HVKKGTTPTATGVIYVLSILPVTLFMGLIGLLVTAATGNSDPIEVFATAMDNKFLTVI
                     TLLFIAFAQVTTNVLNNIVPPSYILMDSFKMKWSHATILVGILSICVMPWKLVTAESA
                     DGLSLFIKIYSAFLGPIFAVMVVDYYILRKRTLNVNDLYNKEGIFKGINWAAIIAIAI
                     GSFCSLIVVDLSWYVSLIPSGLSYYILMRVLKSSEAFRKGTVLEHQ"
     gene            complement(9494..10549)
                     /locus_tag="PXE50_001544"
     CDS             complement(9494..10549)
                     /locus_tag="PXE50_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL5622454.1"
                     /translation="MGRPRKQQNRYLPENLRPKTVTRKSGKTVIYWLYRTHGKTEISL
                     GTNRNEAFIKAAQLNIERESQTARITFGLVAKRYRDEVIPQKKASTAQTDLCKIKNLL
                     LFFNDAPLEEITPQHIREYMIWRKDTPGSANNEFSMFSHIWQYAREWGYTNLPSPNIG
                     MKRYPIRKREIYVENNIFQMVYEVADQDMRDLMDLAYITGQRPVDLVNIRKEHIFDGY
                     LHIVQQKTQAKLRIEIVGKLADIIQDRLEKATGTHLFSTKKGEKLTARKLGKRFTYIR
                     EQAVKNNPEYANEIMAFQFRDLRAKSGTDKALSLGEEAARQQLGHTSVQMTKTYIRKA
                     PIVTPIKESVPSSKHQS"
     gene            complement(10509..10784)
                     /locus_tag="PXE50_001545"
     CDS             complement(10509..10784)
                     /locus_tag="PXE50_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4224 domain-containing protein"
                     /protein_id="HDL5622455.1"
                     /translation="MEQPTEFLTKDELADLTGYRQKKRQIEWLRERHYIIQDENKYKP
                     LVLYKDVYGHPRQQYPEAQSTGKWKSPAYLMGVKNGKTTQTTESLLT"
     gene            complement(10874..11380)
                     /locus_tag="PXE50_001546"
     CDS             complement(10874..11380)
                     /locus_tag="PXE50_001546"
                     /inference="COORDINATES: protein motif:HMM:NF024784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HDL5622456.1"
                     /translation="MRILPRNENYAATENGEIFSFLSNKILKPRPLKNGYLRVQLVDE
                     NGVKDYLIHRLVCETFHGYPDLHVNHKDRDKTNNRPENLEWCTRSENMLHCSRLGGFS
                     KQSERMKKMNIESCSVPVAAITLDGKLFKKYTSMTSAGKDGFSHSKISLCIQGKRKTH
                     KGYIWQKL"
     gene            complement(11358..11954)
                     /locus_tag="PXE50_001547"
     CDS             complement(11358..11954)
                     /locus_tag="PXE50_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017807451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HDL5622457.1"
                     /translation="MPLSITANPTKAVQLKHQGEALSGGSETLVVHGTQDPIISQNKA
                     HCLGRNNGQENVLFEVKGAEAVRISEIQDKTPTLKARMGTGGNNIPCIALAGNTIGRQ
                     PQNDGNGNVFDESGVSYMLTRTDVHAVSAGTTIRKLTPTECERLQGFPDGWTKITYRG
                     KSAEECPDSPRYKAIGNSMCTNVMKWIGERLSAYLTSQ"
     gene            complement(11875..13194)
                     /locus_tag="PXE50_001548"
     CDS             complement(11875..13194)
                     /locus_tag="PXE50_001548"
                     /inference="COORDINATES: protein motif:HMM:NF024795.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hint domain-containing protein"
                     /protein_id="HDL5622458.1"
                     /translation="MNNIIKFTYGSICSGIEAASVAWHDIGTPLWFSEIEPFPCAVLA
                     HRFPDVPNLGDMTALPEKILNRKIPAPDVLVGGTPCFTAGHMVLTDKGYMPIETLSVG
                     DLVVTHKGQLKPILRVGSEIKPVGKLTAVGLPESIVCTPEHPFYAQKWQTINTKRNGK
                     YHRKTIISKPEWIEAHKLEGYQWVSLTDFSVMPYGGFHSKLTDDEVLLIAGYYLGDGW
                     IRRWKGKNKKAVVISVNKEKYRKFSLSFAKLPHHITTENNSVIKITICDTELADFLYS
                     QFGEKAGGKTIPAWCLSHSFRSKIFEGYMITDGSFRNGVYTANSISKSLAYGIAALSQ
                     TLGYISSVSKVTVAPTKEIQGRIVNQNDYYQMRAFLQSTSRKSRLDENRLLRSVQSFE
                     ITGNEVVYNIEVADDNSYILNNAVVHNCQSDKGGTVKASGGGFEWRE"
     gene            complement(13191..14096)
                     /locus_tag="PXE50_001549"
     CDS             complement(13191..14096)
                     /locus_tag="PXE50_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015701527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HDL5622459.1"
                     /translation="MQFQEHNNRKKADKFAEYITGEALRRYVAEKVKQYARNNVSVFD
                     GAAGSGQLEQFVRPTSFTAVEVQSESCDVLRHNFPTAQIYNQSFFLYPNGEPCDCVIM
                     NPPFSLKFKDLSQAEQAQIQSEFPWKKSGVVDDIFVLKGLANSHQWGFFILFPGVGYR
                     QTEKRFREEVGNQLVELNRIQNAFEDTPIEVLFLVVDKTKTTDDCSRELIDCAGGQIQ
                     QICADKWKIRPDHWESIQPPPPPQEEIKPLELEAFAREQAIERIVGEVRLSKLIAEFF
                     EPELRRTFNAFIDDICVAVQAEKIV"
     gene            complement(14330..14986)
                     /locus_tag="PXE50_001550"
     CDS             complement(14330..14986)
                     /locus_tag="PXE50_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antA/AntB antirepressor family protein"
                     /protein_id="HDL5622460.1"
                     /translation="MTNSLITVFDGTIQNTQIQLCNARELHSFVESKQQYSHWISDRI
                     TDYGFVQDEDYIIVTERTAGRPRKEYHITLDMGKELAMVERNEKGRQIRKYFIECERK
                     MKELLQNNQQNLPLALPEKKYTFEFTEDELQSLVWAWFAFVRGIHTFRYIYPMFQKLG
                     SNIAPEIYGQGFEYSHTAQSAHKILERITKEFDYDPMTNWRVLKHVRGFDPAFKKPTF
                     "
     gene            15390..15578
                     /locus_tag="PXE50_001551"
     CDS             15390..15578
                     /locus_tag="PXE50_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622461.1"
                     /translation="MKELFKQWLINQDSPFINSCGVECILSKVDDWLNIINANEEETE
                     TLIEWRNAFLQDVSVFIA"
BASE COUNT         4467 a         3060 c         3306 g         4775 t
ORIGIN      
        1 gtagttcctt tttgatgtat caatactaaa aataacctgt attattctag cagatttctg
       61 ggtaatcgag gagttgataa catttaaaaa ttagcgtttt gcaaaatttt ccaaaaaaag
      121 accgcttgtt aggctataat agccaaccaa acagaccaat tcaaaggaga atcggtatgg
      181 aatatcaatt tacccatagt attcacgggg tggtggcaaa atgttcgatg gatcacgagg
      241 cgtttgctcg ttggttgaat gccgaaataa cggaaaatcc tagccagtta gcccctattt
      301 tcgctgaaat agagaagtgt cgagccgcat ttccgaatca ttatgaatgt gtgtttgaag
      361 ggcgggagta tagtctctat tttgattatg atgaagtgat ggcaaaagca aacaatttag
      421 atgctgcttt tgatgatgag gaaatggaag aaggctttca attttacaat gaagagagca
      481 tcgcattttg tggcttagat gactttgaga aatttttgaa agcctaccaa cattttgtgc
      541 aaacttatca ttgattgaaa tgattaattg aaaccaaagc tattaaggga atctaattcc
      601 ttgtagaata gccgtttata gcaattttaa gatattaaat ttatgagtcg tactaaaaaa
      661 acacgtcgta ttaccgacat tatgccggca agaaagaccg ataaacctaa acagcccatg
      721 cctaaattag gtggggggaa aaatcgcaaa ctgacccgtt atgagttaga tgctcaagcc
      781 cgtgaggaaa aacgtaagcg taaacataaa ggcttgccga caggctcacg caatgctgat
      841 ccggcagagc agaaaaaagc agtggtgaaa gaggtgaaag atccgcgtat cggtagccgt
      901 aaaaaagtgc cgttaatggt ggaatttgtg aaccagccgg aaaaagggcg gacgattaag
      961 gctgtgccgg ttgagccaat caaaccaacg ctttcaccgg aacaagagct ggagcagtta
     1021 gaaaataacg aatgtttaaa tcagttgtta gatgatttgg aggcgggcaa aaccttatcc
     1081 gcagaagatc agaaatttat gaatgaatgt ttagatcgca ttgatgaatt aatgactgag
     1141 cttggcatcg aatatgaaga tgaagagggc gataatggcg atgcgttatt acgccaattt
     1201 gaaacgatgg atattaataa attccgctag gtagccgatt atgatgctaa gaatattcct
     1261 gatggtgctt gccgctttga ttttaatttc gctgggcggg tatgcactgc acttaatgct
     1321 gaaagtgcga gctcagaaaa agcacgaaca agcactgatt gaacaggcaa agcaagcaca
     1381 aaaagatcgt tatattcgga ttttagacag cattgaagtt attgctcggg caatgatttc
     1441 agaacagtgc gatttttcgg aaggcgtttt acgtttaaaa ccgctattag atgttctcgg
     1501 cagaaaatta agcgactata cggcgatgtg ggcgttgtat ggcgtggtag aaaatatgcc
     1561 gattttagat gaacgcaaaa atttaaaacg taacgaaaga atgaagttgg atttagagcg
     1621 ggaagcaaaa gaagcggagc ttgaatcaga catcaaaaat gagtgttacc aattattaaa
     1681 agatattgaa gaaatgagaa aggcaatcta atgtcagaaa ttatttggga tttagccctt
     1741 attcaaaaat ataaccattc agggcctcgt tatacctctt acccaacagc gttggagttt
     1801 aacgaaaatt acaccaatga agattttatt cgtgctgcag ctcgttaccc tgagcgtccg
     1861 ctttcgcttt atgtgcatat tccgttttgc cataaactgt gctatttctg tggctgtaat
     1921 aaagtgatta ctcgtcatcg ccataaagtt gaaatttatt tagattattt agagcgtgaa
     1981 attaaaactc gcgcacctct gtttcaaaat cgtttagtga cccaaataca ctggggtggc
     2041 ggtacgccga cttatttaga cgaagatcaa tcggcacgtt taatgcaaat gctacgagcc
     2101 aattttgatg tgagcgatga tgcggaaatc agcattgaaa tggatccgcg tgaaatcgaa
     2161 ttaagtatgt tggatcacct gcgtgctatc ggttttaacc gtctgagtat gggtattcag
     2221 gatttcgata aagaagtgca acgtttggtg aatcgtgagc aagatgaaga gtttattttt
     2281 gccttgatga aacgggcaaa agaacttggt tttgtttcaa ctaatgtgga tttgatttac
     2341 ggcttgccaa aacagaatgt ggaaagcttt atgtacacct taaaacgtgt ggtagagcta
     2401 aaccctgatc gtatgagcgt atttaactat gcccacttgc caagccgttt tgctgcacaa
     2461 gtgaaaatta aagaagagtt gttgccggct ccggaaacca aattgacgat tttgcaaaat
     2521 tccatcgaat ttttaggcaa aaacggttat aagtttatcg gtatggatca ctttgctaaa
     2581 cctgatgatg agttagctat tgcacaagaa aaaggcattt tacaccgtaa cttccaaggc
     2641 tataccactc aagaagagtg tgatttattg ggaatgggcg tatcggcaat cagcttactc
     2701 ggcgatactt acgcccaaaa ccgcaaagaa ttacaacaat actatgctga tgttgaaacc
     2761 aacggtattg cgttgcataa aggcattgcg ttaacccaag atgattgcat tcgccgtgat
     2821 gtgataaaag ccttgatttg taatttcaaa ttagattttg ccaccattga aaagcaatat
     2881 ggtattgatt ttaaacgtta ttttgccgaa gatttagctt tcttagcgcc gttggcggaa
     2941 gatgaattat taacgatgaa tgacgacagc attgtggttt ccccacgagg gcgtttattg
     3001 atccgtaata tttgcttatg ctttgatgtc tattcaagac aattagcgag aagacagcag
     3061 ttttcccgta ttatttaatg agcaagcggt cgattttggt aaaaattttg caaaaacaga
     3121 ccgcttgttc ccggcttata aaggaaaaat gatgaaacag cgttatagct tactttctct
     3181 tgctgtgatg gcagcttgtt atagcaacag tgccgcagct gatttaaagc aacaatgttt
     3241 acttggcgtg ccgcattttc agggcgaagt ggtagagggc gatcaactta gaatgcctgt
     3301 taccattgag gctgacagtg cggtcattaa ccagcctcgt gatgccacct acaccggtga
     3361 tgtaacgatc aaacaaggta accgttcgat ttgggcggat caggtgcggg ttgagcaaga
     3421 tggcgaaaat gcccgaatgg cgtatttgca gggtaatttt aactaccaag ataatttgat
     3481 tcaggcaacc ggttcagatg cgaccatcaa tctgctttcc aaagatgcga atttagctaa
     3541 tgctaattac caattaattg gcagacaagg gcgtggcacg gcagaatccg gtgaattcgg
     3601 caacagcaaa cacacgctga aaaatgccag tttcacttcg tgcttaccga atgataattc
     3661 gtggcaaatt gaagcgaatg aaatgattca gcacgttgat gaagaatatg cggaaatgtg
     3721 gcacgcccgt tttaaagtgc tgggaatgcc ggtattttat tcgccttact tacaatttcc
     3781 gattggcgac cgccgccgta gtgggttatt aattccaagt tttgagcgtt caagcaaaaa
     3841 cggctggaca tattcgcaac cgttttattg gaatatcgca ccgaatatgg actcgaccat
     3901 cactccaact tactattcac gccgtggttg gcaaatcagc ccggaatttc gttatttaac
     3961 gaaaatcggg caaggcttag tggcaaccga atatatggcg aaagatcgtt taagcgagta
     4021 ccaaccggga aatgatgatc gtaaacgcta tttattccac tggcgtcacg caatgagttt
     4081 tttaaccgat tggcgtttct cggtcgatta caccaaagtg agcgacagac gttatttctc
     4141 tgattttgat tcggattatg gtagcagtac tgatggctat gcgacgcaga attttaaatt
     4201 aggctactat cagccgaatt ataatatctc aatttcaggt aaaaaattcc aaaccttcga
     4261 tgagttggat atcgggcctt atcgcgttct gccacaaatt gattttaact attataaaaa
     4321 cgatctaatt aaaggcggag atttcaaatt ctttgcccaa gcagcccgtt ttgaaaatga
     4381 tagtaaatta atgccaaaag cgtggcgttt ccacgctgag ccaacactga atttcccatt
     4441 agcgaaccgc tatggtagct taaatttaga aaccaagctc tatgcaacct actatcaaca
     4501 aacgaaaggt agtgagagta cggaagaaat taagaaaagt gtaagtcgtg tactgccaca
     4561 gattaagctc gattttaaaa ccgtgttgga atccgataaa cagcttttct ctggctatac
     4621 tcaaacgctt gagcctcggg tgcaatatat ttatcgccca tataaggatc aaagcgatat
     4681 tggctcgaaa gcacatcgaa gtgtgagctt aggctatgac tctgcattat tgcaaaacga
     4741 ctatttctca ctgtttaatg acagacgtta tagcggttta gatcgtattt cgtcagcaaa
     4801 tttagtcacc gcaggtggca caacccgttt ctttaaagag gcaaccggtg aagaggtgtt
     4861 taatttcagc ttaggacaaa cttattatat aagcccgtct aaaattgatg atacctcaga
     4921 taacagcact aaaggtcata cgacttcatg ggcagcggaa tctaactgga aattccataa
     4981 gaattggaat tggcatggta gctatcaata tgatactcgt ttaaaccaaa cggcgttagc
     5041 gaatatgtca ttgcaataca aaccacagtc agacaaattg attcagctta attaccgcta
     5101 tgcaagtaaa gattacatca atcaaaactt gaacacgaat aagtatgggc aatccattaa
     5161 acaagtgggc ggtgtgctag gttgggaatt aaccgataaa gtgtcggtaa tgaccagtta
     5221 ttaccacgac cttgcattga aaaaaccggt ggaagggcaa atttcgctta actacaacac
     5281 ttgctgttgg gcggcaaatg tgtatgtggc tcgtcgctta gtttcaacgc cggtaggttc
     5341 atctgatacg atcaatgatt tctactatga caataaattc ggcattaact ttgagctacg
     5401 ctttggcaca aactacagca atggtgtaac ccgtatgcta aaacgaggta ttattcctta
     5461 caccgagccg tatagcatta attaacaaag taaaaacaaa taagtaaaaa tacaaatcgg
     5521 ggcgaaaaat atttgccccg atttttttat atttggctga taagcggtta aattctgttg
     5581 gaattttgca aatcttccgc taaattcaac cgcttgccat cgaaacttaa cctgtatttc
     5641 gcatacctgc ggcaatacct gtgatggtga tcatcaatgc ttgctctagt acaggatcag
     5701 cattttcacc ttgtttgcga atcctatcta acaattctac ctgaagtaga ttgagcggat
     5761 cggtataaat attgcgtagt gcaatcgatt ctgcgatcca aggtaaatcg gccattaatt
     5821 gtccatcgtg agccagtgca agtacggttt taagatcagc ctgtagttgc gtacgcaaca
     5881 tattgcctaa acggtgtagt tttggctcga ctaggcgttg gtcgtaatat tccgccagcc
     5941 aaatatcagc tttactaaat accatttcca gcattccgat acgggtcgag aaaaacggcc
     6001 attcgttaca catttctttt agtaaggttt cattaccttc atcaatcaac tgttgcaatg
     6061 cttgccctgc acctaaccaa gcaggtagca ttaagcggtt ttgcatccaa gcgaaaatcc
     6121 aaggaattgc acgcaaactc tccactccgc cttttggatt acgttttgca gggcgtgagc
     6181 caagcggcag acgggaaagt tcttgctctg gtgtagcaga gcggaaatac ggtacgaagt
     6241 ctagctcgcc acgcaccata tcacggtaaa tttggcaaga aatatcggag gcttttgcta
     6301 gcacatctcg ccattgctgc tttggctccg gtggtgggaa aatattcgct tctaaaatcg
     6361 cactggcata gagttctaaa ctttcaactg ccacggcagg taagcctaat ttaaagcgga
     6421 tcatttctcc ttgttcggtc actcgtaagc catttttgag tgagcgaggt ggctgagaaa
     6481 gtaaggctgc gtgagccggt gcgccaccac gcccgatagt accaccacga ccgtggaata
     6541 aggttaattc aatattatat ttttcacata aattaaccag agcttcttgc gcccgatatt
     6601 gcgcccagcc ggcagcaagc attccggcat ctttggcgga atcagagtag ccgatcataa
     6661 tcatttggta attgttgatg acgccacgat accagccgat attaaataaa tcggtcatca
     6721 ctttttcact atgatctaaa tcgcctagcg tttcaaataa tggggcaacc ggaatagtaa
     6781 atttgcaccc cgcctctttg agtaaaaggt gaaccgagag tacatcagag gcctctcttg
     6841 ccattgaaat gacataggct gaaatgacac cttcaggttg ctcggcaaca attttacaag
     6901 tgtctaacac ttctttagtt tcagggcttg gagtccagtt ggttggaatc aatgggcggc
     6961 gagaactgag ttcacgcact aagaatgcct gtttatcatc ttccgtccag tgagcataat
     7021 cgcctaagcc gatatagcgg gtaatttctg caatcgccat ttcgtggcgg gtactttctt
     7081 ggcgaatatc taagcgtgat aaacctaaac caaaacagtt tatacgacgt aagcaatcta
     7141 gtaatgcacc atttgcaata attcgcatac cacaggcttg taatgactca tagcaatcaa
     7201 aaagcggttc ccacaattgc tgatctgaag ttaaaatgtc actttcatca atagttgaaa
     7261 ttttaccttc caataattcc gcatagtaaa tttcggtatt aattaatttc tggcgtaata
     7321 cttttagtaa tacgcgatat ggctctaaat ggttgccata tttagcacga aatgcagggg
     7381 tacactgtgt aatcgataat tcttcagcaa gatttttaat atcttgtaag aacaattccg
     7441 tggctttcca acggttcatt cttaatacac ggcgagttgt ttctgccgtg acgaacgggt
     7501 taccgtcacg gtctccgccc atccaagaag aaaaacggac aggggctaaa tttaccggat
     7561 attgcacacc aaagtgtttt tctaaataga agttaagctg acggcaaaat tccggcacgg
     7621 ctttccataa actattttca atgactgcca taccgccttt ggcttcatca acaggggttg
     7681 ggcgttgggt tctgatttca ttagtatgcc aagcaagggc aatcagttgc attaaacggc
     7741 gcttgatttt atagctttct gcctcagtta aatcatcatg ttccaacaaa ttcaaacatt
     7801 tattgatttc aacgtgttta tgccccagcg aacggcgggt tacttccgtt gggtgagctg
     7861 ttagcactaa atcaatcatt aggctttcca cggttttaat cactttttca acggggatat
     7921 tttgtgattt tagacgaagg aacagagagt ctaatgagcg actaccaagt gattcatcaa
     7981 tatgatggcg agaaacagtt tgatgttgtt cagcaatatt tgttagattt agaaaatggc
     8041 taaatgcacg tgcaacgggt aagacatcat cgttagaaat attggctaat ttatctaata
     8101 gctgttcacg ggcgttttca tcgccggcac gagaattgcg agataacaca cgaatgcttt
     8161 cgatgagttc tagaatgtaa tttccttgcg catcacgaat cgtttctccc aaaaattcac
     8221 ctaacatatg gatattatgc tgaattgttg aatattgctg gttcataaaa aattcctatg
     8281 gtaaacataa attaaattag gtctaaatat gccgaaaatc gctgaaaata gcaaatagat
     8341 ttaatttaat ttttgaatta aatgataaaa cgcaaaaaat agctgtcaat atgtgtttaa
     8401 aactgttgtt cggttttgat aacttgcctg ttgtttatgt gctattcact gttattcaag
     8461 ttggcttatc cattaatggt tttaaaggta ttaaatggtt ggaaaatgtt tcttgtgtgt
     8521 tcctcatcgg tattcttgct tatatgcttt atgttgtgaa tacaaaattc tctgtagaaa
     8581 taggcgagcg ctttgccaat attgaaggca cttggggaat gccattctgg gctgcaacta
     8641 cagcattctt gggtatttat tcaacaatga ttttaaatgc ttccgattat tctcgccacg
     8701 ttaaaaaagg aacaacccca acagcaacag gtgtgattta tgtattatca atcctccctg
     8761 taaccttatt tatgggttta atagggttgt tagttacggc agctacaggc aatagtgacc
     8821 caattgaagt atttgcaact gcaatggata ataaattttt aacagtaata acgttattat
     8881 tcattgcttt tgcacaggtt acgacaaacg tgttgaataa tattgttccg ccatcttaca
     8941 ttttaatgga ttcatttaaa atgaaatggt cgcatgccac cattttagtg ggcattcttt
     9001 ctatatgtgt aatgccttgg aaattggtaa ctgctgaatc agcagatgga ttatctttgt
     9061 ttattaaaat ttactcggca ttcttaggcc ctatttttgc ggtaatggtc gtcgattact
     9121 acatcttaag aaaacgtact ttaaacgtaa atgacttata taataaagaa ggtattttca
     9181 aagggattaa ctgggcagca attattgcga ttgctatcgg ttcgttttgc tcactgattg
     9241 tggtggatct ctcttggtat gtcagtttaa ttccatcagg cttgagctac tatattttga
     9301 tgagggtgtt aaaaagttcc gaagctttcc gtaaagggac agtgctagaa catcaataag
     9361 atgacaagcg gtaaaattta ttaaaaatat tatcagtaat aacgagtaac aaaaattact
     9421 tatctttcaa tctattataa gtgattttta tgtaaacgtt ccgaaaaaat gcaaaatgtt
     9481 ccgaaactgt cttttaagac tggtgttttg aggagggaac actttctttg ataggggtta
     9541 ctattggggc ttttcgaatg tatgttttgg tcatttgaac gctagtatga cctagttgtt
     9601 ggcgagcggc ttcttcacct agagaaaggg ctttatctgt tcctgattta gctcttagat
     9661 cccgaaattg gaatgccatt atttcatttg cgtattccgg gttattcttg accgcttgtt
     9721 cccgaatata agtgaacctt ttacctagtt ttctagcggt tagcttttcc cctttcttag
     9781 tgctgaataa gtgtgttcca gtagctttct ccagcctatc ttggataata tcagccagtt
     9841 ttcccactat ctcaatacgt agtttggctt gtgttttttg ctgaacaata tggagataac
     9901 catcaaaaat gtgttctttc cggatattga ccaaatcgac aggacgttgt ccggtgatat
     9961 aggcgagatc cattaagtct ctcatatcct gatctgccac ttcatatacc atctgaaata
    10021 tattgttctc aacgtaaatt tcacgctttc tgatagggta gcgtttcatt ccgatattag
    10081 ggcttggtaa gtttgtataa ccccactctc gagcgtattg ccaaatatga ctgaacattg
    10141 aaaattcgtt attagcagat ccaggtgtgt cttttcgcca aatcatatac tctcggatat
    10201 gttgaggggt gatttcttcg agaggagcgt cattaaagaa tagcagtaga ttttttatct
    10261 tgcacaaatc tgtttgtgct gtgctcgctt ttttctgagg tataacttca tctcgataac
    10321 gtttggctac aagcccgaag gtaattctgg cagtttggct ttctctttct atattgagtt
    10381 gagcagcctt aataaaagcc tcatttctat ttgtgcctag agagatttcc gtttttccgt
    10441 gcgtgcgata tagccaataa atgacagttt tgcctgattt tcgtgtaact gtttttggac
    10501 gtaaattctc aggtaagtag cgattctgtt gtttgcgtgg tcttcccatt tttcactccc
    10561 attaaataag caggtgattt ccatttccca gtggattgag cttctggata ttgttggcgg
    10621 gggtgcccat agacatcttt gtatagcact aatggcttat acttgttttc atcttgaatt
    10681 atatagtgac gctccctcaa ccattcgatt tgtcttttct tttgacgata gcctgttaaa
    10741 tcagcaagtt cgtctttcgt taaaaattca gtaggttgtt ccatattctc tccaaataac
    10801 cccctcattt agagggattg agttaaataa tcgttaagcc tttgtcctat ccaccgcata
    10861 caagggacgg ccattataac ttttgccata tgtaaccctt gtgcgttttg cgtttaccct
    10921 gaatgcaaag gctgattttt gaatgtgaga aaccatcttt acctgcactt gtcattgagg
    10981 tgtatttttt gaataatttc ccgtccagag ttattgcggc aacaggaact gagcaactct
    11041 caatattcat ttttttcatc ctctcggact gcttgctaaa acctccaagt cttgagcaat
    11101 gcaacatatt ttctgagcgt gtacaccact ctaaattttc aggtcggtta tttgttttgt
    11161 ctctgtcctt atgatttaca tgtagatctg gataaccgtg aaaagtttcg cataccagtc
    11221 tatggattaa atagtctttt actccattct catctacaag ctgaactctt aaataaccat
    11281 tctttaaagg tctaggtttt aagattttgt tgctcaagaa actaaaaatt tctccattct
    11341 cggtagctgc atagttttca ttgcgaggta agatacgcac ttaatctctc tcctatccat
    11401 ttcattacat ttgtacacat cgaatttcct atcgccttat atcgtgggct atcagggcat
    11461 tcttcggcag atttgccacg gtatgtgatt ttcgtccagc cgtctggaaa gccttgtagt
    11521 ctctcgcatt cggtgggagt aagttttcga atagttgttc cagcactgac agcgtgaaca
    11581 tcagttcggg taagcatgta acttacacca ctctcatcaa atacgttgcc gtttccgtcg
    11641 ttttgtggct gtctgccgat agtattaccg gcaagggcaa tacaagggat attatttcca
    11701 cccgtcccca ttcttgcttt cagtgttggc gttttgtcct gaatttcgct aattcgtaca
    11761 gcttcagcac cttttacttc aaataagacg ttctcttgcc cgttgtttcg acctaaacaa
    11821 tgagctttgt tttggctgat aattggatct tgcgtaccgt gaacaactag cgtctcactc
    11881 ccgccactca aagcctcccc ctgatgcttt aactgtaccg cctttgtcgg attggcagtt
    11941 atggacaacg gcattattta agatgtagct gttgtcatct gccacctcaa tgttataaac
    12001 aacttcattt ccagttatct caaaggattg cacgcttctc aataatctat tttcatcaag
    12061 gcgacttttt cttgatgtcg attggaggaa cgctcgcatt tgataatagt cattctgatt
    12121 gacaattctt ccttggattt cttttgtcgg agcaacagtt actttggaaa cagatgagat
    12181 atatcctaag gtttgggata atgcagcaat gccgtaagca agggatttcg aaatgctatt
    12241 tgcggtataa actccgtttc taaaagagcc atcggtaatc atataccctt caaaaatttt
    12301 acttctgaaa gaatgagata aacaccaagc cggtatagtt tttccgccgg ctttctcacc
    12361 aaattgcgaa taaagaaaat cagcaagttc agtgtcacaa atagtgattt taattaccga
    12421 attattttcg gtagtaatat gatgaggaag tttggcaaaa gaaagagaaa acttccgata
    12481 tttctcttta tttacagaaa taacaacagc ttttttattt ttgcctttcc atcttcttat
    12541 ccagccatca ccaagataat aaccggcaat tagaaggact tcgtcatcag tcagtttgct
    12601 atgaaaacca ccatagggca taactgaaaa atcagttaat gatacccatt gatagccctc
    12661 tagcttatga gcctcaatcc actcaggttt ggaaatgata gttttcctat ggtattttcc
    12721 attccttttg gtgtttatcg tttgccattt ttgagcataa aaaggatgtt caggggtgca
    12781 aacgattgat tcaggtaagc caacagccgt taattttcca actggtttta tttcactgcc
    12841 aacacgcaaa ataggtttta gttgtccttt atgagtaaca actaaatctc cgacagaaag
    12901 tgtttcgatt ggcatatatc ctttatccgt taaaaccata tgcccagcgg taaagcaagg
    12961 cgtaccccca accaacacat caggagcagg aattttacga ttgaggattt tttcaggtag
    13021 ggcggtcata tcgcccaagt tcggcacatc ggggaaacgg tgagcaagca ctgcacacgg
    13081 aaacggctca atctcgctga accataacgg cgtaccgatg tcgtgccacg ctacacttgc
    13141 tgcctcaatg ccggagcaga tagatccata ggtgaatttt attatgttgt tcatacaatc
    13201 ttctccgcct gcaccgcaac gcaaatatca tcaataaatg cgttaaaagt gcggcgtaat
    13261 tctggttcaa aaaattctgc gatcagcttg gataagcgaa cctcgccgac aattcgttca
    13321 atcgcttgct ctcgggcaaa cgcctctaat tcaagcggtt ttatctcttc ttgtggcggt
    13381 ggtggcggtt ggatactttc ccaatgatca ggtctaattt tccatttatc agcacaaatt
    13441 tgttgaattt gcccaccagc acaatcgatt aactcccgag agcaatcatc ggtcgttttg
    13501 gttttgtcta ccaccaagaa taggacttca atcggggtat cctcaaaggc gttttggatg
    13561 cggttgagtt ctacaagttg attgccaact tcttctcgaa agcgtttttc tgtttggcgg
    13621 tagccaacgc cgggaaagag aatgaaaaat ccccattggt gactatttgc cagtcctttt
    13681 aggacgaaaa tatcatcaac caccccagat tttttccacg gaaattcgga ttgaatttgt
    13741 gcttgttcgg cttggcttaa atccttaaat ttaagggaaa atggcggatt cataatcacg
    13801 caatcgcacg gttcgccgtt aggatagaga aagaagctct gattatagat ttgagccgta
    13861 gggaaattgt gccgtaacac atcgcagctt tcggattgga cctctaccgc agtaaaagag
    13921 gttgggcgga caaattgctc caactgccca gaacctgccg ccccgtcaaa aacagaaaca
    13981 ttatttctgg catactgctt gaccttttca gcaacataac ggcgtagagc ttcacctgtg
    14041 atgtattcag cgaatttgtc ggcttttttg cggttattgt gttcttggaa ttgcattttt
    14101 cctccaaaaa ataaccgctt gcggaacaag cggttgggtt aattagcgtt gagctgtaca
    14161 aattttgcca tcgcagtcgt tgcgtaactc tagatggtca gcagcaactg caaaggcggt
    14221 taaaaagagt atgatttttg cgtatttcat cgtctaatcc tcaaaatttg ggtgcaggaa
    14281 accgccgctt gatgtttcgc aagcggtcgg gttttataat tttttgtgat tagaacgttg
    14341 gctttttaaa tgccgggtcg aaacctcgaa cgtgtttgag tactcgccag tttgtcatcg
    14401 ggtcgtaatc aaattctttg gtaatccgtt caagaatttt atgagccgat tgtgcggtgt
    14461 ggctatattc aaaaccctgt ccgtagattt caggtgcgat atttgaaccg agcttttgaa
    14521 acattgggta gatatagcgg aaagtgtgaa tacctcgcac gaaagcgaac caagcccata
    14581 cgaggctttg gagttcatct tcggtaaatt caaaggtgta tttcttttca ggcagtgcaa
    14641 gcggtaggtt ttgctgatta ttttgcaaaa gctctttcat cttgcgttcg cattcgatga
    14701 agtattttcg gatttgtctg cctttttcgt tgcgttccac cattgcgagt tctttgccca
    14761 tatcaagggt gatatggtat tccttgcgtg gtctgccagc ggtgcgttcg gtgacgatga
    14821 tgtagtcttc gtcttgcacg aaaccgtagt cggtgatgcg gtctgaaatc cagtgtgaat
    14881 actgctgttt gctttcaacg aatgaatgaa gctcacgagc attgcaaagt tgaatttgag
    14941 tgttttggat tgtaccgtca aaaacggtaa taagtgaatt tgtcattttg acattctccg
    15001 ctaataagtt ttaacactca tcaccgcaga ggccaatcgt tggtgatgaa ctagacagga
    15061 ttggccttac agttagcggt aactgcgttc ctttcggaac tcctatctag ctcatcattg
    15121 ggacttttag ataaatttat ctaaaaggtt gatttgctaa tttcggatat aaaaaaagac
    15181 gcatggtgcg tctatcatct ctccgcaccg ctaacaattc aggaggccaa tcccgacttt
    15241 ctgttgaaag tgcggttatc ttaatccgaa ttgggggcgg ttgtcaaacc tcaatatcta
    15301 tttttgcgat ctgcatcgaa aaaataaatt ttcgttctga cagtaaaacg ctttcgtagt
    15361 aatctcataa aaaacataag gggaacacta tgaaagagct tttcaaacaa tggctaatca
    15421 atcaggactc gccattcatt aatagctgtg gcgttgagtg tattttgtca aaagttgatg
    15481 actggctaaa cataatcaac gccaacgaag aagaaaccga aactcttata gagtggcgga
    15541 atgcttttct gcaagatgtt tcggttttta tagcttaggt actataaatc gtcttcttta
    15601 acccaaat
//
LOCUS       DANLZQ010000058        15602 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.058, whole genome shotgun sequence.
ACCESSION   DANLZQ010000058 DANLZQ010000000
VERSION     DANLZQ010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15602)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15602)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15602
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.058"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            202..1308
                     /gene="mltA"
                     /locus_tag="PXE50_001552"
     CDS             202..1308
                     /gene="mltA"
                     /locus_tag="PXE50_001552"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HDL5622462.1"
                     /translation="MNWKAYKKAIAAASVVAIATVLVACSSSGQKGKTTSYDAEKAKF
                     GAKYNGRHFMPYGTHFQAGRLGLNAAPVNQLDFLQQLSNVRAYSSLADSYAIAYGKIS
                     RWISSGGNINDLAKYGISTRLMRGEDGYQNVLMTGYYSPVIKARRTPQGQYQHPIYAM
                     PSSKRFSRAEIYAGALQGQGLELAYSNSMLDNFLLGVQGSGYVDFGDGRLNYFAYAGQ
                     NGFKYASVGRLLVEDGEIPKEKMSVQAIREWGQRNPSRVQGLLERNPSYVFFKNDPTG
                     QVKGSAGVPLVPLASVASDRSIVPSGSVLLVEMPLIDSKGNWTGKHEMRLMVALDVGG
                     AVKGHHFDLYQGIGDKAGHIAGLMKHYGRVWVLN"
     gene            1321..1770
                     /locus_tag="PXE50_001553"
     CDS             1321..1770
                     /locus_tag="PXE50_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622463.1"
                     /translation="MLKKLSAIFLLLPSAVLANNLQNITASTEPKYKISEIDVRILIR
                     QLNNIEQCIYPELAKPGYQQIYANWNLAENLTMQYFEYQLLKELLGEENQKLMQNDTL
                     STEYFHLLHSRLNHQKANVDPEKCDTFKPRYKEIYKSMENALTKKNQ"
     gene            complement(1804..3321)
                     /gene="purF"
                     /locus_tag="PXE50_001554"
     CDS             complement(1804..3321)
                     /gene="purF"
                     /locus_tag="PXE50_001554"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005647425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HDL5622464.1"
                     /translation="MCGIVGIIGNSPVNQAIYDGLTLLQHRGQDAAGIVTIDDENRFR
                     LRKANGLVSDVFQQEHMVRLQGNVGIGHVRYPTAGSSSVSEAQPFYVNSPFGITLVHN
                     GNLTNNAELKARLYNEARRHVNTNSDSESLLNIFAYFLDLYSTQHLSPDNIFETVRKT
                     NDSIRGAYACIAMIIGHGMVAFRDPFGIRPLVLGKREIEGKTEYMFASESVALDVVGF
                     EFVRDVLPGEAIYVTFDGQLHSQICADNPKLNPCIFEYVYFARPDSVIDGVSVYSARV
                     HMGELLGEKIKREWGRIIDDIDVVIPIPETSNDIAVRIANMLYKPYRQGFVKNRYVAR
                     TFIMPGQAQRKSSVRRKLNAIASEFKGKSVLLVDDSIVRGTTSEQIVEMARAAGAKRV
                     YFASAAPEIRYPNVYGIDMPTCEELVAYDRSVEEVAQMIGVDKLIFQDLEALYKSIQL
                     ENPTIHRFDDSVFTGEYITGDVDKCYLDSIARSRNDKAKAEAAKQATNLEIHNER"
     gene            complement(3336..3839)
                     /locus_tag="PXE50_001555"
     CDS             complement(3336..3839)
                     /locus_tag="PXE50_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HDL5622465.1"
                     /translation="MVDLIVIGIIAFSVLISLWRGFTNEALSLLGWVIAFFVASSFYP
                     YLSGYLTQINSVYLQNSEFLRNGIAAAILFILTLIVCGVINGLLGKVIDLSGMSITDR
                     ILGGAFGALRGILIVSAILFFLDTFTQASQTELWKSSLLIPHFDFIVKWFFEQLQANS
                     SFLNTTK"
     gene            complement(3985..4446)
                     /gene="rnhA"
                     /locus_tag="PXE50_001556"
     CDS             complement(3985..4446)
                     /gene="rnhA"
                     /locus_tag="PXE50_001556"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HDL5622466.1"
                     /translation="MKLVEIFTDGSCLGNPGKGGIGILLRYNGYEKTVSKGYFQTTNN
                     RMELRAVIEALAMLKEPCKVQLNSDSQYMKNGIQKWIFNWKKNDWKTSDKKPVKNKDL
                     WVALDQEIQRHQIEWSWVKGHSGHRENEICDELAKQGANNPTLDDVGYIAD"
     gene            complement(4539..5870)
                     /gene="argG"
                     /locus_tag="PXE50_001557"
     CDS             complement(4539..5870)
                     /gene="argG"
                     /locus_tag="PXE50_001557"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005722481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HDL5622467.1"
                     /translation="MSATILEALPLGQKVGIAFSGGLDTSAALLWMRKKGAVPYAYTA
                     NLGQPDEDDYNAIPKKAMEYGAENARLIDCRQQLAHEGIAAIQCGAFHISTGGIPYFN
                     TTPLGRAVTGTMLVAAMKEDDVNIWGDGSTFKGNDIERFYRYGLLTNPKLKIYKPWLD
                     QLFIDELGGRLEMSKFLIENGFDYKMSVEKAYSTDSNMLGATHEAKDLEELSTGMKIV
                     KPIMGVAFWDESVEIKAETVSVTFEEGVPVALNGKRIDDAVELIMEANRIGGRHGLGM
                     SDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQYRINGLRLGRLLYQ
                     GRWFDPQALMLRETAQRWVAKAITGTVTLELRRGNDFTILNTESPNLTYEAERLSMEK
                     VEDAPFTPADRIGQLTMRNLDIVDTRGKLAVYTDAGLLAANNSVIPQLGKK"
     gene            6054..7094
                     /locus_tag="PXE50_001558"
     CDS             6054..7094
                     /locus_tag="PXE50_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HDL5622468.1"
                     /translation="MKKLLVIRNDKIGDFMVCFPAFAMLKQSMPNVEITALVPSYTAP
                     LAELCPSIDKIIIDTANKKDKNEFNRILQAVKNEQFDAVICFVSDWHNAKLTWQSGIK
                     YRLAPATKLFQFLYNHRLTQRRSQSAKAESEYNLDLARAFLSKHNIPIVEPHTPYLSV
                     EQQTVQAQKAKLCEQLNITTVKKWVFVHSSTGGSANNLSIEQYAELIQGILAEFDCYV
                     VLTAGKGESEKAQQLAQQINHNNVVVYDKNEGLQDFTHSLACADLFIAGSTGPLHISG
                     ALNIPTIGFYPSRLSAIPRRWKPINDANKHIAFCPPSDKASQMNLTLISISEALKTIV
                     PFIRRMWNTPSL"
     gene            complement(7159..7917)
                     /locus_tag="PXE50_001559"
     CDS             complement(7159..7917)
                     /locus_tag="PXE50_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDL5622469.1"
                     /translation="MPTLSVAMIVKNEAQDLRACLDTVKDWVDEIVILDSGSTDETPQ
                     IAAEYNARFYTNTDWQGFGKQRQLAQQYVTSDYVLWLDADERVTAELKQSILQAVKND
                     EKNTVYKISRLSEVFGKQIRHSGWYPDCVVRLYRTEFAKYGDELVHEKVHYPKEAKIQ
                     KLQGDLLHFTYKDIHHYLVKSASYAKAWAIQRANAGKTASLFDGVTHAIGCFVKMYLL
                     KAGFLDGKQGFLLAVLSAHSTFVKYADLWNRTRK"
     gene            8044..8358
                     /gene="yhbY"
                     /locus_tag="PXE50_001560"
     CDS             8044..8358
                     /gene="yhbY"
                     /locus_tag="PXE50_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010786380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HDL5622470.1"
                     /translation="MSITLTTKQKQFLKGLAHHLSPVVMLGGNGLTEGVLAEIDNALD
                     HHELIKVKVAGADRETKQLIIDAILRETKAAEVQTIGHILVLYRQSEEKKISLPKATK
                     AI"
     gene            8419..9141
                     /locus_tag="PXE50_001561"
     CDS             8419..9141
                     /locus_tag="PXE50_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HDL5622471.1"
                     /translation="MFKKFSLYTLAMLLIPVVTWLANWHWSLAIQYAEFDFDYFLYLI
                     TETGSVPYAIITCVVFALLLARVVRKRYSLIFVITVCVASMVATQAIKTAMKSTFQEP
                     RPFVTALFQDKTDDFYQLTREQRGLAVMEKIGANQNFVTAHQAKEVGYSFPSGHTIFA
                     VSWLLLVVGFCRNMRGQAVVLAHFFAISWAALMLISRLRLGMHYPIDLFTSSLIAFLI
                     NLALFVWFVPWLESKKWFAKKP"
     gene            9210..9371
                     /locus_tag="PXE50_001562"
     CDS             9210..9371
                     /locus_tag="PXE50_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622472.1"
                     /translation="MEMSIEKIAELLSDKEKDDYPFSIEERQFAAQASADTWEAILNN
                     TIQPFDFKK"
     gene            9379..9741
                     /locus_tag="PXE50_001563"
     CDS             9379..9741
                     /locus_tag="PXE50_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622473.1"
                     /translation="MYQVFIAEPKDPNLEKGLLKHFIKSYLTQEELDFLHKILTNLPN
                     IRPFWGDTGYKYIVIDNVYFLYEVSESETKVILLGTKFNNKRKTFNFANTKTQQKSMK
                     KWINDLAIYKPHKINQSQ"
     gene            9754..10671
                     /gene="nagK"
                     /locus_tag="PXE50_001564"
     CDS             9754..10671
                     /gene="nagK"
                     /locus_tag="PXE50_001564"
                     /EC_number="2.7.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005708433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine kinase"
                     /protein_id="HDL5622474.1"
                     /translation="MAIYYGLDVGGTKIELAAFNEKLEKLHSERVPTPQTNYQDWLTA
                     IKTLVETADTKFDEKGTVGLGIPGFVNRETGIAEITNIRVADGKTILKDLAECLGREV
                     RAENDANCFALSEAWDESNKPYSTVLGLIIGTGFGGGFVFDGKIHSGRIGMAGEVGHM
                     QLNYHALKLLDWDKAPIYECGCGNQACLDTYISGRGFELLFNDLVGEKISAKAIIERF
                     YQQETKVVAFVEKYIELMAISISNLITILDPDMIVFGGGLSNFDYIYQALPKALPKHL
                     MRSAKVPVIKKAIHGDSGGTRGAAALFLK"
     gene            complement(10742..12691)
                     /locus_tag="PXE50_001565"
     CDS             complement(10742..12691)
                     /locus_tag="PXE50_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HDL5622475.1"
                     /translation="MYQRSQSRTVLFPILLFVGINLVILTLSRLVLGVWQSDRVSAVD
                     GWIPLILQGIRIDISSLCWLFGLPALFSVLCFHKNVLGSIWQTVLRIWLTVGSVFILF
                     MEVATPNFIETFDLRPNRLFIEYLVHPREVFTMLINGHLWAVICGIGIAMISLIIYWK
                     LSGWATKNLHFPSWKMRPLLALLVAAIVFVGGRSSFAHRGINPAMVAFSSDPLVNSLV
                     LNSGYSVLYAVQQLKDEDKSSEQYGKMSVEEMFNIVKQVRNRPASDYISDEIPTLTQN
                     KATYQGKPKNIVIILEESLGAQFVGSLGGKNLTPNLDKLSEQGWYFTNLYATGTRSVR
                     GIEAVTAGFTPTPARSVVKLTKSQTNFFSIAELLKRQGYHTSFIYGGEKHFDNMASFF
                     YGNGFQQIIDEKDYKNPKFTATWGVSDEDLFDKANETFNQLHKSGKPFFSLVFSSSNH
                     DPFEFPDGKIELYEQPKQTRHNAAKYADYAIGHFFELAKKSEYWQDTVFLVIADHDSR
                     AVGEHLVPIQHFHIPALLLGEHIQPRTDNRLVSQLDMPTTLLSVAGISGQYPMIGYDL
                     TQDIDPNRAFMQYDATQAMMRGNDVVVMRPNLPIEGFSYDKANYKLTPKEQPESFKKE
                     ALAHALLGSYLYKNQLYKLPEETKQ"
     gene            complement(12724..13512)
                     /locus_tag="PXE50_001566"
     CDS             complement(12724..13512)
                     /locus_tag="PXE50_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HDL5622476.1"
                     /translation="MQVTELNIYPIKSTQAIQVSQAFVEPKGLNFDREFMLAEPNGKF
                     ITARKDPELYRLAAFPIATGVMITHTSGQKCVALYQDFVEEQSSEVWGTHFNAKVAAE
                     AVNQWLSEIFGRAVQLRWLGSQSQRIVANFADHPMSFADSNPVSLMSLKSLEQVQQWS
                     PIPLEMARFRPNIVIDGNVAFEEEQWQQVQIGEVLFTKAALCTRCILITRDLNTLELD
                     PKSEPFRTLKEKHCDEKGKPVFGIHLVPQNSGVIKVGDPVIIQL"
     gene            13637..13867
                     /gene="xseB"
                     /locus_tag="PXE50_001567"
     CDS             13637..13867
                     /gene="xseB"
                     /locus_tag="PXE50_001567"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HDL5622477.1"
                     /translation="MAKKPTQDFESTLKELEAIVTHLESGDLPLEEALNEFETAIKLV
                     QQGQERLQKAEQRIQILLNKNDTAPLSDYERE"
     gene            13873..14766
                     /gene="ispA"
                     /locus_tag="PXE50_001568"
     CDS             13873..14766
                     /gene="ispA"
                     /locus_tag="PXE50_001568"
                     /EC_number="2.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2E,6E)-farnesyl diphosphate synthase"
                     /protein_id="HDL5622478.1"
                     /translation="MSYLLATDLTHLQQRINHFLAEKLKTTDSVGSPLVEAMAYAVLL
                     GGKRVRPFLIYATGRMLGVPLEKLDHSAAAMEAIHAYSLVHDDLPAMDDDRLRRGKPT
                     CHIAFDEATAILAGDALQSFAFELLATDPHLTDREKVVQVTELATASGAKGMCLGQSL
                     DLIAENKAVSLEELELIHRNKTGALILSSVMMGLNLSEYSQNVAIKQPLVNYAKAIGL
                     AFQVQDDILDVIGETDKIGKIVGSDEHLNKSTYPKLLGLDGAKQKAEMLYQTALHSLE
                     QLPFDTTALKELANFIVKREN"
     gene            complement(14801..15601)
                     /locus_tag="PXE50_001569"
     CDS             complement(14801..15601)
                     /locus_tag="PXE50_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HDL5622479.1"
                     /translation="MCQLLGMNCNTPTDITFSFDGFRRRGGLTDHHTDGFGIAFFEGK
                     GVRVFRDNRPGASSPMAEAISQYQIKSLNVIAHIRKATRGDVNLENTHPFIRELWGEN
                     WVFAHNGTVEGVGVCEECHYQPIGTTDSEAAFCRIVSELKEMYPAKPSEKEIFDAVVQ
                     ITSRIAEHGVFNFVLSNGHWMIARCTTNLHYVCRKAPFGKALRDDDVSIDFSQYTKIT
                     DKVTIIATQPLTKNENWTKMKNGGYVFFKDGDVVYEIEGTLPEAQPHV"
BASE COUNT         4765 a         3289 c         3003 g         4545 t
ORIGIN      
        1 ggctataata tatcaatttg acataatgac aagtaaaatc atacaaaatt gctctaagtg
       61 atgtaaatta caacagatat agtatcaaaa tacgcttatt gttgtaaaaa caatcaaatt
      121 atattctggt tttattttgt cgctgttttt gctattcttc tgtttatttt tcacatttta
      181 ttaacgatat aaggatattc gatgaattgg aaagcatata aaaaagctat tgcggcagct
      241 agcgtggtag cgattgcaac ggtattagtg gcgtgttcgt cttcaggcca aaaaggcaaa
      301 acaacctctt atgatgcgga aaaagctaaa tttggagcaa aatataatgg tcgtcacttt
      361 atgccttatg gcacacattt tcaagctgga cgtttaggat taaatgctgc tcctgttaat
      421 caactagact ttttacagca gctttctaat gtcagagcct atagtagctt ggcagattct
      481 tatgctatcg cttacggaaa aatcagtcgt tggatctcat cgggcggtaa tattaatgat
      541 ttagcaaaat atggtattag tactcgttta atgcgtggcg aagatggcta ccagaatgtg
      601 ttaatgacag ggtattactc gccggttatc aaagcccgta gaacgcctca ggggcaatac
      661 caacacccga tttatgcgat gccgtctagc aaacgttttt cacgggcgga aatttacgca
      721 ggagcattgc aaggtcaggg cttagaactg gcttatagta attcaatgct cgataacttc
      781 ttattaggtg ttcaaggtag cggttacgtt gactttggtg atggtcgctt aaactatttt
      841 gcttatgcag ggcaaaatgg ctttaaatat gccagcgttg ggcgtttatt agtagaagat
      901 ggcgaaattc cgaaagagaa aatgtcagtg caggctatcc gtgaatgggg gcaacgtaac
      961 cctagccgtg ttcaaggttt gttggagcgt aatccatcgt atgttttctt taaaaacgat
     1021 cctaccggtc aggtaaaagg ctctgccggt gtgccgttag taccacttgc atctgttgca
     1081 tcagatcgta gcattgtgcc atcaggtagc gtgttgttgg tcgaaatgcc gttgattgat
     1141 agcaaaggaa attggaccgg caaacacgaa atgcgtttaa tggtggctct tgatgttggc
     1201 ggtgcagtga aaggccatca cttcgattta tatcaaggga ttggcgataa agcaggccat
     1261 atcgcaggtt taatgaaaca ttacggccgt gtttgggtat taaattaata cagggtaact
     1321 atgttaaaaa aactatctgc catattctta cttctaccga gcgccgtgct tgcaaataat
     1381 ttgcaaaata taaccgcttc aactgagcct aaatataaaa tctcagaaat agatgtcaga
     1441 attttgatac gccagctcaa taatattgag caatgtatct atcctgagtt agctaaaccc
     1501 ggttaccagc aaatctacgc aaattggaat ctggctgaaa atttaacgat gcaatatttt
     1561 gaatatcagc ttctaaaaga gttgctcgga gaggaaaatc agaaactgat gcaaaatgat
     1621 acgctttcta ccgagtattt ccatttactg cattctcgtt taaatcacca aaaagcaaat
     1681 gtagatcccg aaaaatgcga tacatttaaa cctagatata aagagattta taaaagtatg
     1741 gaaaatgcac tcactaagaa aaatcaatag taaaaaactc gcagttttca ctgcgagttt
     1801 cttttatctt tcgttatgaa tttctaaatt ggtggcttgt tttgccgcct ctgcttttgc
     1861 tttatcgttt cgagatcttg ctatactgtc taaatagcat ttatctacat cacctgtaat
     1921 atattctcct gtaaatacag agtcatcaaa gcgatgaata gtcggatttt ccagttgaat
     1981 agacttataa agtgcttcaa ggtcttggaa aatcaattta tccaccccta tcatctgtgc
     2041 aacctcttcc actgagcgat cataagccac taattcttca caagtcggca tatcaatgcc
     2101 atacacattc gggtagcgaa tttccggtgc ggcagaggca aaataaaccc gttttgcacc
     2161 agctgctcgt gccatttcca cgatttgttc agacgttgta cctcgtacaa tagaatcatc
     2221 aaccagtaac acgcttttgc ctttaaattc agaggcaatc gcatttaatt tacggcgaac
     2281 cgagctttta cgctgtgctt gccccggcat aataaaagtt cgagctacat agcggttttt
     2341 aacaaaccct tgacgatagg gtttatacaa catattagca atacgtaccg caatatcatt
     2401 tgaggtttca ggaatcggga tcaccacatc aatatcatcg ataattcgtc cccattcacg
     2461 tttaattttc tcacctaata attcgcccat atgcactcgt gcagaatata cagaaacgcc
     2521 atcaatgacg gaatcaggac gggcaaaata aacatattca aaaatacaag gattcagttt
     2581 tggattatcg gcacaaattt gcgaatgtaa ttgcccatca aaggtaacat aaatcgcttc
     2641 acccggcagc acatctcgca caaattcaaa ccccactaca tcaagagcca cactttccga
     2701 agcaaacata tattcggttt taccctcgat ttcacgttta cccagcacta acgggcgaat
     2761 accgaatggg tcacggaaag caaccatacc gtgtccgata atcatcgcaa tgcaagcata
     2821 agcaccacga atgctatcat tggttttacg aaccgtttca aagatattgt ctgggcttaa
     2881 atgctgagtg gaatagagat ctaaaaagta agcaaaaata ttaagaaggg attcagaatc
     2941 agaattagtg ttcacatggc ggcgggcttc gttgtataag cgagctttaa gttccgcatt
     3001 attagttaaa ttaccgttgt gaactaaggt aataccgaaa ggtgaattga cataaaatgg
     3061 ctgggcttca gacacacttg agctacctgc tgttgggtag cgaacgtgac caattccaac
     3121 attgccttgt aatctcacca tatgctcttg ctggaaaaca tcgctgacta agccgttagc
     3181 tttgcgtaag cggaaacgat tttcatcgtc tatggtgacg atacctgcgg catcttgtcc
     3241 tcggtgttga agtaatgtta aaccatcata aatcgcctga ttcaccggcg aattcccaat
     3301 aataccgaca atgccgcaca tatagaaaaa cctctttatt tagtcgtgtt taaaaaactg
     3361 gaatttgctt gtaactgttc aaagaaccac ttcacaataa agtcaaaatg cggaattaat
     3421 agcgatgatt tccataattc cgtttggctt gcttgggtaa aggtatctaa gaaaaataaa
     3481 atagccgaca caattaaaat accacgcaat gccccaaaag caccgcctaa aatacggtcg
     3541 gtgatagaca ttccgctcaa atcaatcact ttgcctaata aaccgttgat cacaccacaa
     3601 acaattaaag tcaaaatgaa cagaatcgcc gctgcaatac cattgcgtaa aaattctgaa
     3661 ttttgcaaat aaaccgaatt aatttgtgtg agataaccgc ttaaataagg ataaaacgag
     3721 cttgccacaa aaaaggcgat tacccaacca agtagcgata atgcttcatt ggtaaaacct
     3781 cgccataaac tgataagcac tgaaaaagca atgattccga taacaattaa atcaaccata
     3841 acacacctta aagcgtaaag ctctcctatt ctacaaaaaa agaaaacgtt tgcgtagcac
     3901 tatttcgcta aaaataagtg ctttatgcaa atacaagcgg ttaaattcgg taaaaaattt
     3961 acacaatccg accgcttgta aaacctagtc tgcaatataa ccaacatcgt ccaacgttgg
     4021 attatttgct ccttgtttag ccagctcatc gcaaatctca ttttcacgat gtcctgaatg
     4081 ccctttcacc caactccatt caatttggtg gcgttgaatt tcttggtcta aagcaaccca
     4141 taaatcttta tttttaactg gctttttatc gctggttttc cagtcatttt tcttccagtt
     4201 aaaaatccat ttttggatcc cgtttttcat atattggctg tcactattga gttgcacctt
     4261 acaaggctct tttagcattg ctaaagcctc aatcaccgcc cgcaattcca ttcggttatt
     4321 ggtggtttga aaatagcctt tgctcacggt tttttcgtac ccgttataac gcagcaaaat
     4381 accaatcccc cctttgccgg ggttgcctaa acaagaaccg tctgtaaaaa tttcaactaa
     4441 tttcatcatc acgctttgaa aataaaagcc ccaaagcatt aactttgggg cagcttttag
     4501 gctaaattct aaaagttatc agaatggaga tcaactgatt atttttttcc aagttgtgga
     4561 atcacgctat tattagccgc caataaacct gcatcggtat aaactgctaa tttaccacgg
     4621 gtatcgacaa tatctaagtt acgcattgtt aattgaccga tacgatctgc cggcgtaaac
     4681 ggtgcatctt ctactttttc catacttaaa cgttctgctt cgtaggttaa gtttggcgat
     4741 tcagtgttaa gaatagtgaa atcgttacca cggcgtaact caagcgtgac cgtaccggta
     4801 atcgcttttg ccacccaacg ttgagccgtt tcacgcaaca ttaaagcttg cgggtcaaac
     4861 cagcggcctt gatacaataa acgccctaaa cgtaatccgt taatgcgata ttgctcaatc
     4921 gtatcttcgt tgtgaatacc ggtaactaaa cgctcgtaag cgatgtgtaa taatgccatt
     4981 cccggtgctt cataaatacc acgagatttc gcttcgataa tacggttttc gatttggtct
     5041 gacattccca aaccatgtct gccaccaatg cggttagcct ccataattaa ttcaacggca
     5101 tcatcaatac gtttaccgtt taacgccacc ggcacacctt cttcaaaggt aacagaaaca
     5161 gtttccgctt taatttcaac tgattcgtcc cagaatgcca cgcccataat cggttttacg
     5221 atcttcatac cggtgcttaa ttcttctaaa tctttcgctt cgtgggttgc acctaacata
     5281 ttcgagtctg tagagtaggc tttttccacc gacattttat agtcaaaacc gttttcgatt
     5341 aagaatttag acatttccaa gcgaccgcct aattcatcaa tgaatagttg gtctaaccac
     5401 ggcttataaa tttttaattt tggattggtt aataaaccgt aacgatagaa acgctcaata
     5461 tcgttacctt taaaggttga accatcgccc cagatattca catcatcttc tttcattgcc
     5521 gcaaccaaca ttgtgccggt taccgcacga ccaagtggcg tggtgttgaa atacggaata
     5581 ccgccggttg aaatatggaa agcaccgcat tgaattgcgg caatgccttc gtgagctaac
     5641 tgttggcgac agtcgattaa tcgtgcattt tcagccccat attccatcgc ttttttcgga
     5701 attgcgttgt aatcatcttc atccggctga cctaaatttg cggtgtacgc ataaggcact
     5761 gccccttttt tacgcatcca taacagtgct gctgaggtat ctaaaccgcc tgaaaaggcg
     5821 atacccactt tctgccctaa aggtaaagct tctaaaattg ttgctgacat acgaattcct
     5881 ataaattttg aaagtaaaaa tattcaaacg caaacgctta cgttcaagca aaatattcta
     5941 gctgaaaagt agtaaaaatt catctaaaat ttagcccgat gatttgcaaa ttttttgtga
     6001 aatttgaccg cttataattt actgaaaacc taaaagcaat agagaaaatc agaatgaaaa
     6061 aactactcgt aatccgtaat gataaaattg gggactttat ggtctgcttt ccggcatttg
     6121 ctatgttgaa gcaatcaatg ccgaatgtgg aaattaccgc tcttgtgcca agttatactg
     6181 ctccacttgc cgagctttgc ccttctattg ataagattat tattgatacg gcgaataaaa
     6241 aagataaaaa tgaatttaac cgtattttac aagcggttaa aaatgagcaa tttgatgcgg
     6301 ttatttgttt tgtttcagac tggcataatg ccaaactcac ctggcaaagt gggattaaat
     6361 accgcctcgc tccagcaact aaattattcc aatttttata taaccaccgt ttaacccaac
     6421 gccgttctca atcagcaaaa gcggaatccg aatataattt ggatttagcc cgtgcttttt
     6481 taagcaaaca caatataccg attgttgaac ctcacacgcc atacttaagt gttgaacagc
     6541 aaaccgtcca ggcacaaaaa gcaaaattat gcgaacaact caatattacc accgttaaaa
     6601 agtgggtatt tgtgcatagt tcaaccggtg gttcggcaaa taatttatct atagaacagt
     6661 atgcagagtt aattcaaggt attttggcag aatttgattg ctatgtggta ctcaccgcag
     6721 ggaaaggcga aagcgaaaaa gctcagcagt tagctcaaca aatcaatcac aacaacgtgg
     6781 tggtttatga taaaaatgag gggttacaag attttacaca ttcgcttgcg tgtgcagatt
     6841 tgtttattgc cggctcaacc ggtccgttac atattagtgg ggcgttaaat attccaacta
     6901 ttggcttcta cccgagccga ctttctgcca ttccacgccg ttggaaaccg attaatgatg
     6961 cgaataaaca cattgcattt tgcccaccgt ctgataaagc ctcacaaatg aatttaactt
     7021 taatttctat ttctgaggca ttaaaaacga tagtaccgtt tattcggaga atgtggaata
     7081 ctccctctct ctgataaaat tgctaaacgc aattttatct atctctctcc cactagaggg
     7141 agagagtact gaaaagcatc atttccgagt acgattccac aaatccgcat attttacgaa
     7201 agtagaatgt gccgaaagaa ctgccaataa aaatccttgc ttgccatcta aaaaaccggc
     7261 ttttaataga tacattttca caaaacagcc gatggcgtga gtcacgccat caaataagct
     7321 ggctgttttg cctgcatttg cccgttggat tgcccacgct ttagcgtaac ttgccgattt
     7381 taccaaatag tggtgaatat ctttataggt gaaatgcagc aaatcgcctt gtagtttctg
     7441 gatttttgcc tcttttgggt aatgtacttt ttcgtgaacc aattcatcac catatttggc
     7501 aaattccgtg cgatacaatc tcaccacaca atccggatac caacccgagt ggcgaatttg
     7561 tttgccaaat acttcactta agcggctgat tttgtaaacg gtattttttt catcattttt
     7621 gaccgcttgt aaaatagatt gcttcagttc ggctgtcact cgctcatctg catcaagcca
     7681 aagtacataa tcactggtca catattgttg agctaactga cgctgtttac caaagccttg
     7741 ccaatcggtg ttagtgtaga accttgcgtt gtattcagca gcaatttgtg gtgtttcatc
     7801 agtactgcca ctatctaaaa tcacaatttc atctacccaa tcttttactg tgtcaaggca
     7861 agcccgtaaa tcttgagctt catttttgac aatcatcgca acacttaatg tcggcatagt
     7921 ttatccttct ctctttttgt cgtgtgtttt tctgctattc gttgcatttt actttaaaaa
     7981 tagtggtttt tgtgctattt tctacgccaa attttatcaa caaaacaaat taacggaaaa
     8041 agaatgtcaa ttacattaac aaccaaacaa aaacaattcc taaaaggctt ggctcatcat
     8101 ttaagcccag tggtgatgct ggggggtaac ggcttaacag aaggcgtgtt agctgaaatc
     8161 gataacgcct tagaccacca cgaactgatt aaagttaaag ttgccggggc tgatcgtgaa
     8221 accaaacaat taattattga tgccattctg cgtgaaacta aagcggctga agtacaaacc
     8281 attgggcaca ttttagtgct ttaccgccaa agcgaagaga aaaaaatcag cttgccaaaa
     8341 gcaactaaag cgatctaatt gcaaaaatat gtttaaattc aaccgcttgt attcaagcgg
     8401 ttttttatag gactttctat gtttaaaaaa ttctctcttt atacccttgc aatgttgctc
     8461 attcctgtgg tgacttggct ggcaaattgg cactggtctc tggcaattca atacgctgaa
     8521 tttgatttcg actacttttt atatttaatc accgaaaccg gctccgtacc ttatgccatc
     8581 atcacctgtg tggttttcgc cttattactg gcgagggtgg ttcgcaaacg ctactcttta
     8641 atttttgtga ttaccgtgtg tgtcgcttca atggtagcca ctcaagcaat caaaacagcg
     8701 atgaaatcaa cctttcaaga gcctcgtcca tttgtcactg ctcttttcca agataaaaca
     8761 gacgattttt atcaattaac acgcgagcaa cgtgggcttg ccgtaatgga aaaaatcggt
     8821 gcaaatcaaa attttgttac cgctcaccaa gccaaagaag tgggctattc tttcccatca
     8881 ggccacacta tttttgcggt ttcttggcta ttattggtgg taggtttctg ccgtaatatg
     8941 cgaggacaag cggtcgtttt ggctcatttt tttgcaatca gttgggcggc gttaatgctg
     9001 attagccgct tgcgtttagg tatgcactac ccgattgatt tattcaccag tagtttaatt
     9061 gcgtttctaa tcaatttagc cttatttgtg tggtttgtgc cttggttgga aagtaaaaaa
     9121 tggtttgcta aaaagcctta attggcaatt tagccaaatc aatatacaat acaaattatt
     9181 gaataagtac ctaaaataag gagcttagaa tggaaatgtc gatagaaaaa atagctgaac
     9241 tattaagcga taaagaaaaa gatgactatc cgtttagtat tgaggaaaga caatttgccg
     9301 cccaggctag tgctgatact tgggaggcaa tcttaaataa cactattcaa ccttttgact
     9361 tcaaaaaata ggcttgctat gtatcaagtt tttattgcag aaccaaaaga cccaaactta
     9421 gagaaaggct tattgaaaca cttcattaag tcttatctta ctcaagaaga actcgatttc
     9481 ctgcataaaa ttctcactaa tttacccaac atcagacctt tttggggcga taccggttac
     9541 aaatatatcg tcattgataa tgtttacttc ttgtatgaag tttccgaaag tgaaacgaaa
     9601 gtcattctac ttggcaccaa atttaataat aaacggaaaa cttttaattt tgcgaatacg
     9661 aaaacccagc aaaaatcaat gaagaaatgg attaatgatt tagcaattta taaaccgcat
     9721 aaaatcaatc aatcgcaata agagagcgta attatggcaa tttattatgg cttagatgtg
     9781 ggcggcacaa aaattgaatt agccgctttt aatgaaaaac tagaaaaact acacagcgaa
     9841 cgtgtgccga caccgcagac aaattatcaa gattggctga cggcaattaa aacgctggtt
     9901 gagactgccg atacaaaatt tgacgaaaaa ggcactgtcg ggctgggcat tccgggcttt
     9961 gtaaaccgtg aaaccggcat tgcggaaatt accaatattc gagtggctga cggcaaaacg
    10021 attctgaaag atttagccga atgtttaggg cgtgaagtgc gtgccgaaaa cgatgctaac
    10081 tgctttgccc tgtctgaagc gtgggacgaa agtaataagc cttattccac cgtattaggg
    10141 ttgattatcg gcaccggttt tggcggtggt tttgtgtttg acggtaaaat tcattcaggc
    10201 agaatcggaa tggcaggcga agttgggcat atgcaactta actaccacgc acttaaattg
    10261 ctcgactggg ataaagcccc aatttatgaa tgtggttgtg gcaaccaagc ctgtttagac
    10321 acctatattt cagggcgggg ttttgagtta ctgtttaatg atttagtagg agaaaaaatc
    10381 tcggcgaaag cgattatcga acgcttctac caacaagaaa ccaaagtggt ggcatttgtc
    10441 gaaaaatata ttgagctaat ggcaatcagt atcagcaatc tgattacgat tttagatccg
    10501 gatatgattg tattcggtgg cggtttatcc aactttgatt atatctacca agctctacca
    10561 aaagcattac caaaacactt aatgcgttca gcgaaagtgc cggtcatcaa aaaagcaatt
    10621 cacggcgact caggtggcac tcgtggtgca gcagcattat tcttaaagta atgaacaaat
    10681 ttgagagagg gcaagcggtc atttttaata aaaatattgc agccctctct tttaatttgc
    10741 cttactgctt agtttcttcc ggtaatttat ataactgatt tttatataaa taactgccaa
    10801 gcaatgcgtg tgctaacgcc tcttttttaa acgattccgg ctgttcttta ggggtgagtt
    10861 tatagttagc tttatcgtag ctaaatcctt ctatcggtaa atttggtcgc attaccacca
    10921 catcatttcc ccgcatcatc gcctgtgtcg catcatattg cataaaggca cggtttgggt
    10981 caatgtcttg cgttaaatca taccctatca tcggatattg accacttatt cccgccacag
    11041 aaagtaatgt tgtcggcata tcgagctgac tcactaaacg gttatccgtt cttggctgaa
    11101 tgtgttcgcc taataaaagt gccggaatat ggaagtgttg aattggcact aaatgctcgc
    11161 caacggctct tgaatcgtga tctgcaatca ctaaaaacac cgtatcttgc cagtactctg
    11221 attttttcgc taactcaaag aaatgcccga tagcataatc ggcatatttt gccgcattat
    11281 ggcgagtctg cttcggttgt tcatagagtt caattttgcc gtccggaaat tcaaacggat
    11341 cgtggttact ggaactgaat accaaactaa aaaacggttt acctgatttg tgcagttgat
    11401 taaaagtttc atttgcctta tcaaacagat cttcatcact cacgccccaa gttgcggtaa
    11461 atttagggtt tttataatct ttttcatcga taatttgctg gaaaccatta ccgtagaaaa
    11521 agctcgccat attatcaaaa tgcttctccc caccataaat aaaggaagta tggtatcctt
    11581 gacgttttaa taattcggca atactaaaaa agttagtttg gcttttcgtc agttttacca
    11641 cagatcttgc cggtgttggt gtaaaaccag ccgttaccgc ttcaattcct ctcaccgaac
    11701 gagtacctgt tgcataaaga ttggtaaaat accagccttg ttctgaaagt ttatctaaat
    11761 ttggagtgag atttttccct cctagcgaac cgacaaattg agcccctaaa ctttcttcta
    11821 agataatcac aatgttttta ggctttcctt gataagtcgc tttattttgc gtgagggtgg
    11881 gaatttcatc tgaaatataa tctgaagctg gtcgattacg aacctgctta acaatgttga
    11941 acatttcctc cacagacatt tttccatact gttcggaaga tttatcttca tctttcaatt
    12001 gctgaaccgc ataaagcacg gaataacctg aatttagcac cagtgaattg acaagcggat
    12061 cgcttgaaaa tgccaccatt gccggattaa tccctcgatg ggcaaaactg gaacgcccac
    12121 caacaaaaac tattgcagca accaataaag ccagtagcgg acgcattttc cagctcggga
    12181 aatgcaaatt tttggttgcc caacccgata atttccaata aatgatgaga gaaatcatcg
    12241 caatgccaat cccacaaata acagcccata aatgtccgtt aatcagcatt gtgaacactt
    12301 ctctcggatg gaccaaatac tcaatgaaaa gacgatttgg gcgaaggtca aaggtttcaa
    12361 taaaattcgg tgtggcgact tccataaaaa gaataaatac actaccgaca gttagccaaa
    12421 ttcttaaaac agtctgccaa atcgaaccca gtacattttt atgaaaacac aacacgctaa
    12481 ataatgccgg taagccaaat agccaacata gcgaagatat atcaatgcga ataccttgta
    12541 gtattaatgg tatccatcca tcaacagcgg atactcgatc agattgccaa acgcctaaca
    12601 ctaaacggga taaggtgagg ataactaaat taatcccaac aaatagtagg attggaaata
    12661 gcacagttct tgattgactg cgttggtaca ttttgaatct ccttttaaaa aaatatcggc
    12721 atattataat tgaataatga caggatcgcc tacttttatc acaccactgt tttgtggcac
    12781 aaggtgaata ccgaacaccg gcttaccttt ttcatcgcaa tgcttttctt ttaaggttct
    12841 aaacggctcc gatttggggt ctaactcaag cgtgtttaaa tcccgtgtaa tcaaaatgca
    12901 acgagtacat aatgccgctt tggtaaatag cacttcgcca atttgaactt gttgccactg
    12961 ctcttcttca aatgccacat tgccatcaat cacaatattc gggcgaaaac gagccatttc
    13021 gagtggaatc ggcgaccatt gttgcacttg ctcaagcgat tttagagaca tcaaactcac
    13081 cgggttgcta tctgcaaaac tcattgggtg atcggcaaaa ttcgcaacaa ttcgttggct
    13141 ttgcgagcca agccaacgta gttgcacagc cctaccaaaa atttcactca gccattgatt
    13201 gaccgcttct gccgccactt tggcattaaa atgtgttccc cacacttcac tactctgctc
    13261 ttccacaaaa tcttggtaaa gtgcaacgca tttttgaccg cttgtatggg taatcattac
    13321 ccctgtcgca atcgggaaag ccgctagacg gtataattcc ggatctttac gggcagtaat
    13381 aaatttgccg ttaggctcgg ctagcataaa ttcacggtca aaatttaagc ctttcggttc
    13441 aacaaatgcc tgtgaaactt gaatagcttg agttgatttt atcgggtaaa tattgagctc
    13501 ggtaacttgc atagaaaatc ctccatttgg aaataggata acaatacctg caagcggtcg
    13561 aaaagtaaaa ggaatttgca aatcccttgt gagaacggta aacttgagca acttttacag
    13621 caataggtca gcaacaatgg caaagaaacc cactcaagat tttgaaagca cacttaaaga
    13681 attagaagca atcgttaccc atttggaatc cggtgattta ccgcttgaag aagccctcaa
    13741 cgaatttgaa actgcaatca aattagtgca acaagggcaa gaacggttac aaaaagccga
    13801 gcaacgtatt caaatcttat taaataaaaa cgatactgcc ccacttagcg attacgaaag
    13861 agaataatca caatgagcta tctattagca accgatctga ctcacctgca acaacggatt
    13921 aaccattttc tcgctgaaaa attaaaaaca acggatagcg ttggttcgcc tttagtagaa
    13981 gcaatggctt atgcggtatt gctaggcggt aaacgggtgc gaccgttttt aatctatgcc
    14041 accggcagaa tgcttggtgt gccgttggaa aaattagatc atagtgcggc ggcaatggag
    14101 gctattcacg cttactcgct ggttcacgat gatttaccgg caatggacga tgatagatta
    14161 cgccgtggca agccaacctg ccatattgcc tttgatgaag ctaccgctat tttagccggt
    14221 gatgcgttac aaagttttgc gtttgaactg ctggcaaccg atccgcattt gaccgaccga
    14281 gaaaaagttg ttcaagttac agaattggca accgcttccg gtgcaaaagg aatgtgctta
    14341 gggcaaagtt tggatttgat tgcggaaaat aaagcggtga gcttggaaga gcttgaatta
    14401 attcatcgca acaaaaccgg ggcattgatt ctatcatccg tgatgatggg attaaacctt
    14461 tccgaatatt cgcaaaatgt agccataaaa caaccgcttg taaactatgc caaagcgatt
    14521 ggcttagcct ttcaggtgca agatgatatt ttagatgtca ttggcgaaac agataaaatc
    14581 ggcaaaatag tgggttcaga tgaacactta aataaaagca catacccgaa attgttgggc
    14641 ttagacgggg caaaacaaaa agccgaaatg ctttatcaaa ccgctctcca ttcgctggaa
    14701 cagttgcctt tcgataccac cgcattaaaa gagttagcta attttattgt taagcgtgaa
    14761 aactaagaaa aaacctagcc gaagctaggt tttttagtga ttaaacgtga ggctgagctt
    14821 ccggcaatgt gccttcaatt tcatatacca catcgccgtc tttaaagaaa acatagccac
    14881 cgtttttcat tttggtccag ttttcatttt tggtaagtgg ctgagtggca ataatcgtca
    14941 ctttatcggt aattttggta tattgactaa aatcaatcga cacatcatca tcacgcaagg
    15001 ctttgccaaa cggtgcttta cggcaaacgt aatgcagatt agttgtacaa cgggcaatca
    15061 tccaatgacc gttggataaa acaaaattaa ataccccgtg ttccgcaatt cttgaggtga
    15121 tttgcaccac ggcatcaaaa atctcttttt cgcttggttt agccggatac atctctttta
    15181 attccgacac aatacggcaa aatgccgctt cggaatcggt tgtaccaatc ggctggtagt
    15241 ggcactcctc gcatacccca acaccttcca ctgtgccgtt atgggcaaac acccagttct
    15301 cgccccataa ttcacgaatg aaggggtggg tattttccaa attcacatca ccacgcgtag
    15361 ctttacgaat atgtgcaata acattgagcg atttaatttg atattggctg attgcttctg
    15421 ccatcggcga tgatgctccc gggcggttat cacgaaaaac ccgaacccct ttgccttcaa
    15481 aaaaggcaat tccaaaccca tcagtatggt gatccgtcag cccaccccga cggcgaaatc
    15541 catcaaaaga aaaagtaata tcggttggcg tattacaatt cattccaagt aattgacaca
    15601 ta
//
LOCUS       DANLZQ010000059        15597 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.059, whole genome shotgun sequence.
ACCESSION   DANLZQ010000059 DANLZQ010000000
VERSION     DANLZQ010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15597)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15597)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15597
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.059"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            57..905
                     /locus_tag="PXE50_001570"
     CDS             57..905
                     /locus_tag="PXE50_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HDL5622480.1"
                     /translation="MEKKALFRGFLLSTVALAVAACGNLSKVSDEGTTENPVFPKISE
                     SEFNHDGSQFGSWPNWENVRQIEKGMNKDQLYNLIGRPHFEEGLYGVREWDYAFNYRE
                     NGVHKICQFKILFDKNMNAQSFFWYPNGCNGNSSFALTGDFLFDFDKATLTTKGKEVV
                     DNVAQQLKASKAQQVKVAGYTDRLGSAAYNLDLSQRRSNTVKARLVQQGVTAQIEAVG
                     YGKANQVKACDGETGQALKDCLRPNRRVEISANCGVMKQNEGGNVAGPNGPAPLYQTP
                     AYDGSK"
     gene            993..1811
                     /locus_tag="PXE50_001571"
     CDS             993..1811
                     /locus_tag="PXE50_001571"
                     /EC_number="3.1.3.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphatase"
                     /protein_id="HDL5622481.1"
                     /translation="MNYQAIAFDLDGTLLSSNATILESSKEAIKKVREKGIKVYFVTG
                     RHHTAVRPYYVELGLDTPVVCCNGTYVYDFKNEKVLSGNPLSAEIASKLVNDAQAQGI
                     HTAVYFEDAMTYESLNIHFTKFQKWVESCAPEVRPNVYQVENFQQEIDKGVTVWKVLI
                     SDPDLAKMQKFVEKLPPDQVSPEWSWVDRVDITSVGNSKGARLAEVLKTEGIDLQKVI
                     AFGDNFNDVSMLETVGLGIAMGNSEPDIQQKAKKTIGSNNEDSIANELKAQFNL"
     gene            1814..3505
                     /gene="narQ"
                     /locus_tag="PXE50_001572"
     CDS             1814..3505
                     /gene="narQ"
                     /locus_tag="PXE50_001572"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite two-component system sensor
                     histidine kinase NarQ"
                     /protein_id="HDL5622482.1"
                     /translation="MIKAKYSIARRIGLYFLIMIGFASIISGISLGIMWSNKSDASLI
                     NVSGSLRMQSYRLLSEMDSKKALLPERLLEYHRTLHATELSSLKQSVLLPDSVIESYQ
                     QLLKDWYEMQSYVAQGDKVNYASHIEDYVQRVDDFVFRLQEFAELKLKIATGVIAIAM
                     LLIIALAYIGVWYTRKKIIGPLRQLVKASWQIQNKDFDHVKLAVNEPNELGLLSSTFT
                     EMSNELLKLYTSLEDKVQDKTRRLLAVNRSLLVLYQCSQLLTAKPINKEVLNQVLKTV
                     FDNEHLLGIDLQVYGAEYWNVSIDNKPSLDWVSAEIAIENEKLGILSWKPSLVCPGER
                     LIQNVSEMIGRSLYVVQMQKQQQQLVLMEERAIIARELHDSLAQSLTFFKIQVSLLKL
                     AKTDEKRNEILTVFEKALNDAYSQLRELLTTFRLTIQEANLQQALEKILESLRPKTSA
                     QIRLSCKLPSHMFNAQQQVHVLQIVREAVINAIKHSQATEINVIAETNDDGEHCLTIQ
                     DNGVGLAAHTQPEGHYGLTIMQERAAELKAEFSIENVESGGVKVQVLLPSMISKR"
     gene            3556..4074
                     /locus_tag="PXE50_001573"
     CDS             3556..4074
                     /locus_tag="PXE50_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDL5622483.1"
                     /translation="MQFRKAVEADFETILAIYNQAIPTHQITADLELATTQNRRKWFD
                     FHLETAQYPIWVVEDEKGIAGWFSFSPFYERPAFLHTSEISIYLDRYSKGKGYGSKII
                     EFMQAEMLNHNIHTLMAYVFELNTVSQNLMRKHGFEQWGRFPNIANMGKDEKGEDKWR
                     TLLMMSYQKGIE"
     gene            4117..4716
                     /gene="rdgB"
                     /locus_tag="PXE50_001574"
     CDS             4117..4716
                     /gene="rdgB"
                     /locus_tag="PXE50_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HDL5622484.1"
                     /translation="MEKTKIVLATSNADKVKEMADVLSQFGFEVVAQSEFGIESPEET
                     GLTFVENALIKARFAAKMTGLPAIADDSGLSVMALGGEPGLYSARYAGEQATDADNRQ
                     KLLAKMQGQENRLAKFVSCIVFLKHETDPTPYIASGECFGEILTEERGENGFGYDSLF
                     FYPPKACTFAELETKEKKAISHRAIALEQLKQQLAGENK"
     gene            4713..5033
                     /locus_tag="PXE50_001575"
     CDS             4713..5033
                     /locus_tag="PXE50_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjQ family protein"
                     /protein_id="HDL5622485.1"
                     /translation="MIITTTPTIEGKQIVEYKGLVFGEVVSGANFIRDFLAGITDIIG
                     GRSGAYESKLNGARKEALAELAKEAQKVGANAVVGVSMEYQSMGGDKGMFIVVATGTA
                     VVIR"
     gene            5037..5489
                     /locus_tag="PXE50_001576"
     CDS             5037..5489
                     /locus_tag="PXE50_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgN family cysteine cluster protein"
                     /protein_id="HDL5622486.1"
                     /translation="MQFEQHFEANFWQNKSLLEMNDAEWEALCDGCGKCCYRKYIQGR
                     GRRERLYYTSVACNLLDVNTGRCMNYSNRFKIESDCTKLTKKNLPDFGWLPKTCAYRL
                     LYEGKPLFDWHPLISKDPDSVKNAGMLIANGIHEKDVIDWFEFVIDEV"
     gene            complement(5530..6111)
                     /gene="lpcA"
                     /locus_tag="PXE50_001577"
     CDS             complement(5530..6111)
                     /gene="lpcA"
                     /locus_tag="PXE50_001577"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HDL5622487.1"
                     /translation="MYLEQIKAELQEAADVLDKFMSDEKNIKLIQDAAMLIANSFKQG
                     GKVISCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHLSCVSNDFGYEYVFS
                     RYLEAVGQKGDVLFGLSTSGNSKNVLNAIKVAKEKGMKVIAMTGKDGGQMAGLADVEI
                     RVPHFRYADRIQEIHIKVIHILMMLIEFEMEKA"
     gene            6420..7379
                     /locus_tag="PXE50_001578"
     CDS             6420..7379
                     /locus_tag="PXE50_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HDL5622488.1"
                     /translation="MVVNPESFEQIIGQSVKIKEVVEQAKKFANLDAPLLIQGETGTG
                     KDLFAKSCHHFGSRRMQKFIAVNCAGLPAEEAESEMFGHRGNGVESVGFFEYAHGGTV
                     LLDSISELSLEMQAKLLRFLNDGSFRRVGEDQEIQVNVRVICTSLQPLSLLVEKGKVR
                     EDLFHRLNVLTLNLPPLRDRKEDIPLLADYFIAQISNQLGVSKLEYDNVFLQALQNYH
                     WRGNLRELYNALYRACTLSHSYRLAVKDLHLPRDMEAMIEVREEATLEEMMSQYEAQL
                     LHQFYAEYPSTRKLAQRLGLSHTAVANKLRQYGLTKNGNSKDE"
     gene            7372..9123
                     /locus_tag="PXE50_001579"
     CDS             7372..9123
                     /locus_tag="PXE50_001579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5622489.1"
                     /translation="MNKLAVIFSVCFANLGLNSTAYAAPSIPQELLENSLVYCTTSSG
                     FSFNPQKSDVSSNMNVVTEQIYDKLVEFNPKKNRLEPALAESYSISDDGLVITLRLRK
                     NVAFHTTPWFTPSRKLNAEDVVFSLKRMIGKESDLPEVKSEPESVLHHQRQSYIYQKT
                     AGQIYFPYFESVDLANKIASIHSPSNDIVKIELVRPDSALLAHLASQYAVILSKEYAL
                     QLNADDNLVQLDLLPVGTGVYQLESYENNDYVRLKPNMNYWGKKAYIQNMVVDFSTEA
                     TGRMAKFLNNECDVVAFPEPSQLSVLNNRQLISSKGANLVYLAFNMQRGIGQDLALRQ
                     RIARGINRKRIAEKLFYGTGEVADNLLPTALWSKKNNGSYPYQPHQNSGEQAVEMHDS
                     IINRSLDSKTETEEVNQKQRLKLWVIDEKRVYNQHPLKMAEMIRADLATQNLEVEIRA
                     VSRAYLVQQLANKSADYDLILGGWLANNLDPNSFLEALLSCKAAETVTNLSNWCNEDF
                     DFWLQTARLSDDPASANLLYEFAQKLLEEQLPILPLMNANRVLVIKDGVKQADISPFG
                     QVKLSELRLGLGHKKGN"
     gene            9126..10091
                     /locus_tag="PXE50_001580"
     CDS             9126..10091
                     /locus_tag="PXE50_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDL5622490.1"
                     /translation="MLIVFFRKIFLTLITLIFLSLISFNILLRDPLNHLAELGWFEAY
                     CYYVKSLLNGDFGISFSNGEPLTAQILQVFPATITLCLSALIVSLIIGLPLGFFAATQ
                     QKNMVGRLLNTLGSLSLAVPVFWLALVLMYYASLNQWEVSAIGEIHSLYPKQMVTGFL
                     LLDIWLSDVPYKLKMMQSALHHLALPTLVLAVPATLEVMHITQARAGYVMKQNYIKIA
                     KTRGWTPFRVWRTHIICNTLPALLPMIARTFILIFAFGMLIENIFSWGGIGRWLINAL
                     AIQDYNAISAGVVAIGVFVLLVDMVTGFVRVMLDPSDKKDWYGSY"
     gene            10078..10971
                     /locus_tag="PXE50_001581"
     CDS             10078..10971
                     /locus_tag="PXE50_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDL5622491.1"
                     /translation="MAVIKEPEQFRETNAFKAFWFHFRQDKLALGSFYLFLLLLALIF
                     VGSLLAPYNYNEQFVGLELMPPSWDDKGQISHFLGTDDLGRDILSRIMYGFYYTLGSA
                     LMITLLIAIIGGMIGIYAGLKKGRSFWLISHLFDTFLFMPILLIAIIIATLMEASLVN
                     AMLAIFLAMLPHFIHKIYQATEKQLKKEYIITLKLDGASCWYLIREVIIPNLTGVAIK
                     ALSHIFVIAILDISALSFIMLGAKSPTPEWGAMIRESMELIYIAPWTVILPGLAIIFS
                     IFTVTILGTRLSVIFEKYRKE"
     gene            11042..12094
                     /locus_tag="PXE50_001582"
     CDS             11042..12094
                     /locus_tag="PXE50_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDL5622492.1"
                     /translation="MALLDIRHLSIEIDMPKGRVKMVDNINLTVDEGEICGLVGESGS
                     GKSLIAKVICGMIKDEWIVSADRFRFDDIELLKLSPAERRKLVGDHISMVFQDPLTSL
                     DPSQQIGKQLMQTIQFRGKWWQRFGWKKKKAIELLHRVGIRDHQDIMKSYPSDITEGE
                     AQKVMIAMAVANQPRLLVADEPTNIMESTTQLQVYRLLSSMNQNLGTSILLVSNDMRS
                     IQNWVDSYNVLYCGQTVEIADKESILESSYHPYTRVLLNSSPDFSQPLAFKSSLNTLR
                     GSVPMLQEMPIGCRLGPRCPFAQKKCINKPPLVKVKQHEFACHFPINFREQNLLKNKT
                     ENTPFVVAEIAEKEAF"
     gene            complement(12103..12333)
                     /locus_tag="PXE50_001583"
     CDS             complement(12103..12333)
                     /locus_tag="PXE50_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceK/YidQ family lipoprotein"
                     /protein_id="HDL5622493.1"
                     /translation="MKLTACKLVFLLYLMFNLTACGTVLSLVEQDYRVYAGVIKDFQV
                     MQEGGIFAVLAVIDLPLSFVLDTLMLPVTLSQ"
     gene            12463..13545
                     /gene="leuB"
                     /locus_tag="PXE50_001584"
     CDS             12463..13545
                     /gene="leuB"
                     /locus_tag="PXE50_001584"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HDL5622494.1"
                     /translation="MQTYNIAVLAGDGIGPEVMAEAIKVLEATQQKFGFKLNFNQYNI
                     GGAAIDAQGKALPENTLKGCEEADAILFGSVGGPKWTHLLPDEQPERGSLLPLRKHFS
                     LFCNLRPAALYQGLEKFCPLRADIAAKGFDMVVVRELTGGIYFGQPKGRDGEGAQTRA
                     FDTEVYYKYEIERITRVAFESAMKRKKHVTSVDKANVLQSSILWRETVTEVAKEFPEV
                     TLEHMYIDNATMQLIKAPESFDILLCSNIFGDIISDEAAMITGSMGMLPSASLNEQGF
                     GLYEPAGGSAPDIAGKNIANPIAQILSAAMMLRYSFNLGDAADAIETAIQKALADGYR
                     TADLADDSKPLSTSEMGDIIAKNILA"
     gene            complement(13632..14027)
                     /gene="msrB"
                     /locus_tag="PXE50_001585"
     CDS             complement(13632..14027)
                     /gene="msrB"
                     /locus_tag="PXE50_001585"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HDL5622495.1"
                     /translation="MIKPIHALTEQQVDILINHGTERPFTGKFLNEHRVGIYRCARCH
                     NDLFHSDTKFDAGCGWPSFYQTISESSLRYLDDYSLGRHRIEIRCGNCDSHMGHVFPD
                     GPPPTGLRFCLNSAALNFKWEETGEEIDG"
     gene            14252..15256
                     /gene="gap"
                     /locus_tag="PXE50_001586"
     CDS             14252..15256
                     /gene="gap"
                     /locus_tag="PXE50_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010129843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HDL5622496.1"
                     /translation="MAIKIGINGFGRIGRIVFRAAQHRDDIEVVGINDLIDVDYMAYM
                     LKYDSTHGRFDGTVEVKDGQLVVNGKAIRVTAERDPANLKWNEIGVDIAVEATGLFLD
                     DETARKHITAGAKKVVLTGPSKDATPMFVNGVNFDTYAGQDIVSNASCTTNCLAPLAK
                     VIHEKFGIKEGLMTTVHATTATQKTVDGPSAKDWRGGRGASQNIIPSSTGAAKAVGKV
                     LPALNGKLTGMAFRVPTTNVSVVDLTVNLEKPATYAEICAEIKRASENEMKGVLGYTE
                     DAVVSTDFNGATETSVFDAAAGIALTDTFVKLVSWYDNEVGYSNKVLDLVAHVYNYKG
                     "
BASE COUNT         4917 a         2653 c         3318 g         4709 t
ORIGIN      
        1 ataggttgtg aagctatttt tttatacaga ttactataag gaaacttaat atgaaaatgg
       61 aaaaaaaagc ccttttccgt ggatttttat tatcgacagt ggcattagca gtggctgctt
      121 gtggtaactt aagtaaagtg agtgatgaag gaacaactga aaacccggta ttcccgaaaa
      181 tctcagaatc tgaatttaac cacgatggtt cacaatttgg ttcatggcca aactgggaaa
      241 acgttcgtca aattgaaaaa gggatgaaca aagatcaatt atataatcta attggtcgtc
      301 ctcattttga agaaggctta tatggtgttc gtgaatggga ctatgcattc aattaccgtg
      361 aaaatggcgt acataaaatt tgccaattta aaattttatt cgataaaaat atgaatgcac
      421 aaagtttctt ctggtatcca aatggatgta atggaaactc atcatttgct ttaactggcg
      481 atttcttatt cgatttcgat aaagcgactt taactacaaa aggtaaagaa gttgttgata
      541 atgttgctca acaattaaaa gcatctaaag cacaacaagt taaagtagca ggctatacag
      601 accgtttagg ctctgctgct tataacttag acttatcaca gcgtcgttct aatacagtta
      661 aagctcgttt agtacaacaa ggcgttacag cacaaattga agcggtaggt tatggtaaag
      721 cgaatcaagt aaaagcttgt gatggtgaaa ctggtcaagc attaaaagat tgtttacgcc
      781 ctaaccgtcg tgttgaaatt tctgcaaatt gtggtgtaat gaaacaaaat gaaggtggca
      841 atgttgcagg tcctaatggt ccggctccac tttatcaaac cccagcatat gatggcagta
      901 aataatttct agttttgact aacttagagt agaatattaa ggcaaccaaa tggttgcctt
      961 ttcttttatc tatttattta taggggaata ctatgaacta ccaagctatt gcatttgatt
     1021 tagacggaac actactttca tcgaacgcaa caattttaga atccagtaaa gaggctatta
     1081 aaaaggtaag agaaaaggga attaaagtct actttgttac cggtaggcac catactgcgg
     1141 ttcgccctta ttatgtagaa ctagggctgg atacgccagt tgtgtgttgc aatggcactt
     1201 atgtgtatga ttttaaaaat gaaaaagtat taagcggtaa tccgttatca gcagaaattg
     1261 cttcaaaatt agttaatgat gcacaagctc aagggattca tactgcggtt tattttgaag
     1321 atgcaatgac ttatgagtct ttgaatattc acttcactaa attccaaaaa tgggttgagt
     1381 cttgcgcacc agaagttcgt ccgaatgttt atcaggtaga aaatttccaa caagaaattg
     1441 ataaaggtgt aaccgtatgg aaagtgctta ttagcgatcc agatcttgcc aaaatgcaaa
     1501 aatttgttga aaaattaccg cctgatcaag taagcccgga atggtcttgg gttgataggg
     1561 ttgatattac cagtgttggt aacagcaaag gggcaagatt agcggaagta ttaaaaacag
     1621 aaggtattga tttacaaaag gtgattgcct ttggcgataa tttcaatgat gtttctatgc
     1681 tagaaaccgt tggattaggc attgcaatgg gaaattcaga accagatatt cagcaaaaag
     1741 cgaagaaaac tataggttca aataatgaag atagtattgc taatgaattg aaagctcaat
     1801 ttaatcttta attatgataa aagcaaaata ctctattgct aggcggatag gactctattt
     1861 tttaattatg atcggatttg cttcgattat cagtggaatc tcacttggta ttatgtggag
     1921 caataaatct gatgcgagcc tgattaatgt ttcaggctca cttcgtatgc aaagttatcg
     1981 attgttatca gaaatggatt caaaaaaagc gctgctacct gagcgattgt tggaatatca
     2041 tcgaacgcta catgctacag agcttagttc attaaagcaa agtgttttat tgccagatag
     2101 cgtgatagaa agctatcaac aattacttaa agattggtat gaaatgcaat cttatgtcgc
     2161 tcagggagat aaagttaatt atgcttcgca cattgaagat tatgtgcaga gagttgatga
     2221 ttttgttttc cgcttacaag agttcgctga gttaaaatta aagattgcaa caggcgtgat
     2281 tgcgattgca atgttactga ttattgccct tgcttatatt ggcgtttggt atactcgaaa
     2341 aaagattatt ggacctttaa ggcaattggt aaaagcgagt tggcaaattc aaaataaaga
     2401 ttttgaccac gtaaaattag cggttaatga acccaatgaa ttagggctac tttcctctac
     2461 ttttactgag atgtctaatg aattattaaa attatatact tcattagaag ataaagttca
     2521 ggataaaaca cgtcgtttat tggcggtaaa tcgttcttta ctggtattat atcaatgctc
     2581 tcaattatta actgctaagc cgattaataa agaagtgtta aatcaagtac ttaaaacggt
     2641 atttgataat gaacatttgc tagggattga tttacaagta tatggggctg aatattggaa
     2701 tgtatcaata gacaataaac caagtttaga ttgggtttct gctgaaattg caatagaaaa
     2761 tgaaaaattg ggtatcttaa gctggaaacc ctcactggtt tgtcctggtg aacgattgat
     2821 ccaaaatgtg tcggaaatga ttggtcgtag cctttatgta gtgcagatgc aaaagcaaca
     2881 gcaacaattg gtactcatgg aggagcgtgc aattattgct cgtgagttac acgattcctt
     2941 agcccaatct cttacgtttt tcaaaattca ggttagcctg cttaagcttg ctaaaacaga
     3001 tgaaaagcgt aatgaaattt taactgtatt tgaaaaagcg ttaaatgatg cttacagcca
     3061 attaagggag ctgttgacga cgtttaggct aacgattcaa gaagcgaatt tacaacaagc
     3121 gttagaaaaa attttagaaa gcttaagacc gaaaacctca gcacagattc gcttaagttg
     3181 caaattacct tcgcatatgt ttaatgctca gcagcaagtt cacgtattgc aaattgtacg
     3241 agaagctgtg attaatgcta ttaagcattc gcaagccact gaaattaatg tgattgctga
     3301 aacaaatgat gatggtgaac attgtttgac tattcaagat aatggcgtag ggcttgctgc
     3361 ccatacgcaa ccagaagggc attatggact gacgattatg caagaacggg cggctgaact
     3421 caaagccgaa ttttcgattg aaaatgtgga aagtggcgga gtaaaagtac aggttttatt
     3481 gccgagtatg attagcaagc ggtaataaaa tattaatttt ttgcgtatta ttggcaacga
     3541 ataaaaggat aacaaatgca attccgaaaa gcagtagaag cggattttga gacaatattg
     3601 gcaatttata atcaagcaat tcccactcac caaattaccg ccgatttaga actggcaact
     3661 acgcaaaatc ggcggaagtg gttcgatttt caccttgaaa cagcccaata tcctatttgg
     3721 gtggtcgaag atgaaaaagg cattgctggc tggtttagtt tttcaccatt ttatgaaaga
     3781 ccggcatttt tacatacttc ggaaatcagt atctatttag accgctattc caaaggaaaa
     3841 ggctatggct caaaaattat tgagtttatg caagctgaaa tgcttaatca caatattcat
     3901 acgttgatgg cgtatgtgtt tgaattaaat acagtgagcc aaaatctaat gagaaaacac
     3961 ggctttgaac aatggggaag atttccgaat attgctaata tgggaaaaga tgagaaaggt
     4021 gaggataaat ggcgaacgtt gctgatgatg tcttaccaaa aaggtatcga ataacaagcg
     4081 gtgatttttt agaatatttt tgcaaataag gacaatatgg aaaagacaaa aattgtactt
     4141 gcaacaagta atgcagataa agttaaagaa atggcagatg tactctcaca atttggtttt
     4201 gaggtggtgg ctcaaagtga atttgggatt gaatcaccgg aagaaaccgg tttgactttt
     4261 gttgaaaatg cgctgattaa agcacgattt gctgctaaaa tgacaggttt accggcgatt
     4321 gccgatgatt caggtttatc ggttatggca cttggtggtg aaccggggct atattctgca
     4381 cgttatgccg gagagcaggc aaccgatgcc gataatcgcc aaaaattact agccaaaatg
     4441 caagggcaag agaatcgtct ggcgaaattt gtcagttgta tcgtgttttt aaaacacgaa
     4501 actgacccaa caccttatat tgcgtcgggt gaatgtttcg gtgaaatttt gacggaagaa
     4561 agaggtgaaa atggtttcgg ctacgattcc ctgtttttct acccaccgaa agcttgcact
     4621 tttgccgaat tagaaaccaa agagaaaaaa gcgatttcac accgtgcaat cgcactagag
     4681 caattaaaac agcaattagc aggagagaat aaatgattat tacaactaca cctacgatag
     4741 agggtaaaca aattgtagaa tacaaagggt tagtatttgg cgaagtagtt tctggggcta
     4801 attttatccg tgatttctta gccggtatca ccgatattat tggcggacgt tcaggtgctt
     4861 atgaaagcaa attaaacggt gcaagaaaag aggcattagc tgaattagct aaggaggcac
     4921 aaaaagtggg ggcaaatgcg gtggttggcg tttctatgga gtatcaatca atgggcggcg
     4981 ataaaggaat gttcatcgtg gtagcgactg gtactgcggt tgtaatacgt taatttatgc
     5041 agtttgaaca acactttgaa gcaaatttct ggcagaacaa atcgctactt gaaatgaatg
     5101 atgctgaatg ggaagcatta tgtgacggtt gtggtaagtg ctgctaccgg aaatatattc
     5161 agggaagagg gcggcgtgaa cggctttact atacctcggt tgcctgtaat ttattagatg
     5221 tgaatacagg ccgttgtatg aattactcga accgttttaa aattgagtcg gattgtacaa
     5281 aattaactaa aaagaactta cctgattttg gctggttgcc aaaaacctgt gcttatcgtt
     5341 tactttatga aggaaagcct ctttttgatt ggcacccttt aatctctaaa gatcctgatt
     5401 ctgtaaaaaa tgccggaatg ctgattgcta acggtattca cgaaaaagat gtgattgatt
     5461 ggtttgagtt tgttattgat gaagtatgag aaaaaggcgt ttggtgcaaa cgcctttttg
     5521 ttatagagat taggcttttt ccatctcaaa ttcaattaac atcatcaaaa tatgaatcac
     5581 tttaatgtga atttcttgga tgcggtctgc gtaacggaaa tgaggtactc ggatttccac
     5641 atcggctaat cctgccattt gcccgccatc tttgccggtc attgcaatca ctttcatgcc
     5701 tttttctttg gcaactttga tcgcatttaa cacattttta gagttaccag aggttgatag
     5761 accaaagagt acatcgcctt tttgcccaac ggcctctaga taacgagaga agacatattc
     5821 ataaccgaag tcattactta cacagcttaa atggctgaca tcggaaatag cgattgccgg
     5881 gtatccggga cggttttcac ggtaacgacc tgttaattct tcggcaaagt gcatcgcatc
     5941 acagtgcgaa ccgccattac cgcaagaaat caccttacca ccttgcttga aactatttgc
     6001 aatcagcatg gcggcatctt gaattaattt aatatttttt tcatcagaca taaatttgtc
     6061 taatacatct gcagcttctt gaagctcagc tttaatttgt tctaaataca tcatttgctc
     6121 ctttgtttgc aaaacgctta cctttaaaca tcggctttac caatgggggt agcgagtaaa
     6181 aaattcgttt tttatgaccg cttgaggcat aaaaagtgca ataagtttag aagatctatg
     6241 ctgtattgta aacctaataa cttaaataat ctgaataggg ttgtaaacaa aagtttccaa
     6301 aagagaaaaa tagcggtatg atcgcctcac aatccctctc gcattgttaa ctctagtagc
     6361 taatatcagg ctttaagcgt attaaacaat gcacaaattt gctatttata ggagactata
     6421 tggtcgtaaa tccagaatct tttgaacaga taattggaca atctgtaaag ataaaagagg
     6481 ttgttgaaca agcaaaaaaa tttgccaacc ttgatgcacc attattgatt caaggtgaga
     6541 cgggaacagg aaaagattta tttgccaaat cttgtcacca ttttggatct cgtcgaatgc
     6601 aaaaatttat tgccgtgaac tgtgccggtt taccggctga agaagcagaa tcggaaatgt
     6661 tcggacatcg tggcaatggc gttgagtccg tcggtttctt tgaatatgct cacggtggta
     6721 cagtattatt agactctatt tctgagttat cgctggaaat gcaagccaaa ttattgcgct
     6781 ttttaaatga tggctctttt cgtcgagtgg gcgaagatca agagattcaa gtcaatgtta
     6841 gggtgatctg tacttcatta cagcctttgt cattattagt tgaaaaaggc aaagtaagag
     6901 aagatctgtt tcatcgttta aatgttctca ctttaaattt accacctttg cgagatcgaa
     6961 aagaggatat tccattatta gctgattact ttatcgccca aattagcaat cagttggggg
     7021 tgagcaaatt agagtatgat aatgtttttt tgcaagcatt gcagaattat cactggcgag
     7081 gcaacttaag agagctttat aacgcacttt atcgagcttg tacactttcg catagctacc
     7141 gtttagcggt aaaagatctt catttaccca gagatatgga ggcgatgatt gaagtacgtg
     7201 aggaggcgac acttgaggaa atgatgagcc agtatgaagc ccaattattg caccaatttt
     7261 atgcagaata tccgagtacc cgaaaattag cacaacggct cggactttca catactgcgg
     7321 tggcaaacaa attgcgtcaa tatgggttaa caaaaaatgg aaacagtaaa gatgaataaa
     7381 ctagcggtca ttttttcagt atgttttgca aatttagggc taaattcgac cgcttacgca
     7441 gcgccaagta ttcctcaaga gctacttgaa aatagccttg tgtattgcac tacttcatcg
     7501 ggattctctt ttaacccaca aaaatccgat gtgagttcga atatgaatgt ggtaacagag
     7561 cagatctacg ataaattagt tgagtttaat ccgaaaaaaa atcgactaga gcctgcttta
     7621 gctgaaagtt attcaatcag cgacgatggt ttagtgatta cattacgttt aagaaaaaat
     7681 gtcgcttttc atacaactcc atggtttact ccgagtcgta aattaaacgc agaagatgtg
     7741 gtgttttcgc taaaacgaat gattggtaaa gaaagtgatt tacctgaagt gaaaagtgag
     7801 cctgaaagtg tattacacca ccagcgacaa agctatattt accaaaaaac agcggggcag
     7861 atttattttc cttattttga aagtgttgat ttagcgaata aaattgccag cattcattct
     7921 ccgtcaaatg acattgtaaa aattgaatta gtccgtcctg attcagcatt gttggcgcat
     7981 ttagccagcc aatatgcagt tattctgtct aaagaatatg ctttacagct caatgcagat
     8041 gataacttag ttcaactgga tttattaccg gtaggaacag gcgtatatca acttgaaagt
     8101 tatgaaaata atgattatgt gcgtttaaaa ccaaatatga attactgggg caaaaaagca
     8161 tatattcaaa atatggtcgt agatttttcc acagaagcga ccggcaggat ggcaaaattt
     8221 ttaaataatg aatgtgatgt ggttgctttt ccggaaccta gccaattatc agtgttaaat
     8281 aatcggcagc ttattagtag taaaggtgct aatttggttt atttagcatt caatatgcaa
     8341 cggggtattg ggcaggattt ggcattacgc caacgtattg cacgcggcat aaatcgcaaa
     8401 cgtattgcag agaaattatt ttatggtaca ggtgaagtag cggataacct attaccaaca
     8461 gctttgtggt cgaaaaaaaa taatggaagc tacccttatc aaccacacca aaattcaggt
     8521 gagcaagcgg ttgaaatgca tgacagtatt ataaatcggt ctttagatag caaaacagag
     8581 accgaagaag taaaccaaaa acagcgctta aaactgtggg taattgatga aaaacgagtt
     8641 tataatcaac acccattaaa aatggcagaa atgatacgtg ctgatttagc tacgcaaaat
     8701 ttagaggtcg aaattcgcgc agtaagtcga gcttatttgg tgcaacagct tgctaataaa
     8761 agtgcggatt atgatttgat tttaggtggt tggttagcaa ataatcttga tcctaacagt
     8821 tttttggagg ccttactcag ttgtaaagct gcggaaacgg tgactaattt atcaaattgg
     8881 tgcaatgaag attttgattt ttggttacaa acagcccgtc taagtgatga tccggcatca
     8941 gctaatttat tgtatgaatt tgcacaaaaa ttattagaag agcaattgcc tattctccct
     9001 ttaatgaatg ctaatcgtgt attagtcata aaagatggag tgaaacaggc agatatttcc
     9061 cctttcggcc aggtaaaatt atcagagtta cgtttgggct tggggcataa aaaaggaaac
     9121 taattatgct gattgtcttt tttcgaaaaa tttttctaac cttgattacg ttgatttttt
     9181 tgtcacttat cagttttaat attctgttac gagatccatt aaaccactta gccgagttag
     9241 gctggtttga ggcttattgt tattatgtaa aatctctgct aaatggtgat tttggtatta
     9301 gtttcagtaa tggagaaccg ctcacagcgc aaattttaca ggtgttcccg gctacaatta
     9361 cgctttgttt atcggctctc attgtttctt taattattgg tttgcctctt ggtttttttg
     9421 cggctactca gcaaaaaaat atggttgggc gattattaaa tacactaggt tcattgagtt
     9481 tagccgtgcc ggtattttgg ctggcattag tgctaatgta ttacgcttct ctcaatcagt
     9541 gggaagtgtc agcaattgga gaaatccatt cgctttatcc gaaacagatg gtaaccggct
     9601 ttttgctatt agatatttgg ttatctgatg taccttataa attaaaaatg atgcagagtg
     9661 ctttacatca cttagctttg ccgacattag tcttggctgt gccagctaca ttagaagtta
     9721 tgcatattac tcaagctaga gcaggttatg taatgaaaca aaattacatt aaaatagcga
     9781 aaacgcgtgg ctggacaccg tttagagttt ggagaacgca tattatttgt aatactttac
     9841 ctgcattatt acctatgatt gcccgtacct ttattttaat ttttgccttc ggtatgttaa
     9901 ttgagaacat atttagctgg ggaggaattg gacgttggct gataaatgcc cttgctattc
     9961 aagactataa tgcgatttca gcgggagtag ttgcaatcgg ggtgtttgtg ttattagtag
    10021 atatggttac aggctttgtg cgggtgatgt tagacccatc agataaaaag gattggtatg
    10081 gcagttatta aagaacccga gcaatttaga gaaaccaacg catttaaggc attttggttt
    10141 catttccgac aagataaact tgcacttggc agtttttatc tttttttgct attactggct
    10201 ctcatttttg ttggtagttt gcttgctcct tacaattata atgaacaatt tgttggttta
    10261 gaattaatgc ctccctcttg ggacgacaaa ggtcaaatca gccatttttt aggcactgac
    10321 gatttaggac gggatatttt aagccgtatt atgtatggtt tttactacac gcttggttcc
    10381 gcactgatga ttaccttatt aattgcgatt atcggcggta tgatcgggat ttatgccggg
    10441 ctgaaaaaag gacgttcatt ttggttgatt agccatttgt tcgatacctt tttatttatg
    10501 ccgattttat tgattgcgat catcattgca accttaatgg aagcgagttt ggtcaatgca
    10561 atgttggcga ttttcttagc gatgttgccg cattttatcc ataaaattta tcaagcaacc
    10621 gaaaaacaac tcaaaaaaga gtacatcatt accttaaagc tagacggtgc aagctgctgg
    10681 tatttaattc gagaagtgat tattcctaat cttaccggcg tggcaattaa agcactttca
    10741 catatttttg tgatcgccat attagatatt agtgcgttaa gttttattat gctgggggct
    10801 aaaagcccga cccctgaatg gggagcgatg attcgtgaat ccatggaact gatttatata
    10861 gctccttgga cggtgatatt acctggctta gcaattattt ttagtatttt taccgttaca
    10921 atacttggta cacgcttaag cgtgattttt gaaaaatacc gtaaagaata gtatttaaat
    10981 aggatactga cacataacaa gcggtcattt ttaagtaaaa ttttacagat taaggaatag
    11041 tatggcatta cttgatattc gccatttaag tattgaaatt gatatgccaa aaggcagagt
    11101 aaaaatggtg gataacatca acctgactgt tgatgagggc gaaatttgtg gcttggtggg
    11161 agaatctggt tcgggaaaaa gcctcatagc caaagtgatt tgcggtatga ttaaagatga
    11221 atggattgtg agtgcagatc gctttcgctt tgacgatatt gaattactga aactttcgcc
    11281 agcggaacgc cgaaaattgg taggcgatca tatttcaatg gtattccaag atccgcttac
    11341 tagccttgac ccaagccagc aaattggtaa acaactgatg caaaccattc aatttagagg
    11401 gaagtggtgg caacgatttg ggtggaaaaa gaaaaaagca atcgagctac tacaccgtgt
    11461 tggtattcgt gatcatcaag atattatgaa aagttaccca agcgatatta ccgaaggcga
    11521 agctcagaaa gtgatgattg caatggcggt ggcaaatcag ccccgattat tggtggcaga
    11581 tgagccgact aatattatgg aatcaaccac gcagttgcag gtttatcgct tgctttccag
    11641 tatgaatcag aatttgggaa cctcaatctt gctggtgagt aatgacatgc gtagcattca
    11701 aaattgggtt gattcttaca atgtgcttta ttgtggacaa accgttgaaa ttgcggataa
    11761 agagagcatt cttgaatcgt cttaccaccc ctatactcga gtgttactca atagttcgcc
    11821 ggacttttct cagcctttag cctttaaaag tagcttaaat acgctacgag gctcagtccc
    11881 gatgttacaa gaaatgccga ttggttgtcg tttaggccct cgttgccctt ttgcacaaaa
    11941 aaaatgtatc aacaaaccgc cattagtgaa agtaaaacag cacgagtttg cctgccattt
    12001 tccgattaac tttagagaac aaaatttgct taaaaataaa acggaaaata cgccgtttgt
    12061 ggtggctgaa atagcggaaa aagaggcgtt ttaatgtggt tattattggc taagtgtaac
    12121 gggtaacatt aaagtatcta atacgaaact caagggtaaa tcgatcaccg caagcaccgc
    12181 gaatataccg ccttcttgca ttacttggaa atcttttatt acgccggcat aaacacggta
    12241 atcctgttca accaagctta gtactgtgcc acaagcggtg aggttaaaca tcaaatagag
    12301 tagaaaaacg agtttacaag cggtcaattt catcaaaaaa tctccaaata cgcttttatt
    12361 ttacgctatt tttatcgggt tggcgtaaaa ttcgttttaa aaacagctat tttcaggcag
    12421 aatgtagccg aatcgacatt aaatatacta agaggatctt atatgcaaac ttacaacatt
    12481 gcagtgcttg ccggtgacgg cattgggccg gaagtgatgg cagaagctat caaagtgctt
    12541 gaagcgactc aacaaaaatt tggctttaaa ctaaatttta atcaatataa cattggtgga
    12601 gcagcgattg atgctcaagg taaagcgtta cccgaaaata ccttaaaagg ctgtgaagag
    12661 gcagatgcga ttttgtttgg ctcggtaggt ggcccgaaat ggacgcattt actacctgat
    12721 gagcaacctg aacgaggttc gctattacca ctgcgtaaac atttctcgct attctgtaat
    12781 ttacgccctg ctgcattgta tcaagggctg gaaaaattct gcccattacg tgccgatatt
    12841 gctgctaaag gttttgatat ggtggtggtg cgtgaattaa ccggcgggat ttattttgga
    12901 cagccgaaag gccgtgatgg tgaaggtgcg caaacgagag cgtttgacac cgaagtatac
    12961 tacaaatatg aaatcgagcg tattacccgt gtggcgtttg aatctgcaat gaaacgtaaa
    13021 aaacacgtaa cctctgtgga taaagccaat gtgttacaaa gctcgatttt atggcgtgaa
    13081 accgtcacgg aagtagctaa agagttccca gaagtcacgc ttgagcatat gtatattgat
    13141 aatgcgacaa tgcagctaat caaagcacct gaatcgttcg atattttatt atgctcaaac
    13201 atcttcggcg atattatttc cgatgaggct gcaatgatta caggttctat gggcatgttg
    13261 ccttcagcca gcctcaatga gcaaggtttc ggcttatatg aaccggcagg cggttcagca
    13321 ccggatattg ccggtaaaaa tattgcgaat ccgattgcgc aaattttatc agccgcaatg
    13381 atgttgcgtt atagctttaa cttaggtgat gctgctgatg cgattgaaac agcgatccaa
    13441 aaagcccttg ctgatggcta ccgtaccgct gatttagctg atgacagcaa accgctttct
    13501 acctcagaaa tgggcgatat tattgcgaaa aatattctcg cttaaggcta gaagttaaat
    13561 agcacaagcg gtcattattc gccaaatttt tgcaaatttt ccgctaataa tgaccgcttg
    13621 tttattactc gttagccgtc aatctcttcg cctgtttctt cccacttaaa attcaatgcc
    13681 gcagagttga ggcaaaaacg caaccctgtt ggtggtgggc cgtccggaaa aacgtgtccc
    13741 atatgcgaat cacaattccc acaacgaatt tcgatacgat gacgtcctaa actgtaatca
    13801 tctaagtaac gtagtgacga ttctgaaatc gtttggtaaa aacttggcca gccacaaccg
    13861 gcatcaaatt tagtatctga gtgaaataaa tcgttatggc atctggcaca acgataaatt
    13921 cctacccgat gttcattcaa aaattttccg gtaaacggac gttccgtacc gtggttgatt
    13981 aaaatatcaa cttgttgttc tgtcagggcg tgaataggtt taatcatcag caattctcct
    14041 aagatagtag cgaagtcatt gtagcttttt ttgacctgaa aatcgttata aatttcaaaa
    14101 tttgacatag atcacaaaaa atttatctgt tatattggaa gggttctttt ggcttgtcag
    14161 gaaagtgaaa agatgtgcta taattcaagc atctttagtg tagtacataa agaacaaatt
    14221 ttgtttaact ttaatatagg tagaaaaatc tatggcaatt aaaattggta ttaacggctt
    14281 tggccgtatc ggtcgtatcg ttttccgtgc agcacaacac cgtgatgaca tcgaagtggt
    14341 aggtatcaac gacttaatcg atgttgatta tatggcttat atgctgaaat atgattcaac
    14401 tcacggtcgt tttgacggta ctgttgaagt taaagacggt caattagtag ttaacggtaa
    14461 agcgatccgc gtaacagctg agcgtgaccc ggctaactta aaatggaatg agatcggtgt
    14521 tgatatcgca gttgaagcaa caggtttatt cttagatgat gaaactgctc gcaaacacat
    14581 caccgcaggt gcgaagaaag ttgttttaac cggtccgtct aaagatgcaa cacctatgtt
    14641 cgtaaacggc gtaaactttg atacttacgc aggtcaagac atcgtgtcta acgcttcttg
    14701 tacaactaac tgtttagcac cattagcgaa agttattcac gaaaaattcg gtatcaaaga
    14761 aggtttaatg acaactgttc acgcaactac tgcaacgcaa aaaacagtag atggtccatc
    14821 agcgaaagac tggcgtggtg gtcgtggcgc gtcacaaaac atcattcctt catcaacagg
    14881 tgcagcgaaa gcagtaggta aggtattacc tgcattaaac ggtaaattaa ccggtatggc
    14941 tttccgtgtt ccaaccacta acgtttctgt tgttgattta actgtaaact tagaaaaacc
    15001 agcaacttat gcagaaatct gtgctgaaat caaacgtgct tcagaaaacg aaatgaaagg
    15061 cgtattaggc tacacagaag atgcagttgt ttcaacagac ttcaatggtg caactgaaac
    15121 ttcagtattt gatgcagcag caggtatcgc attaactgat actttcgtta aattagtatc
    15181 ttggtacgat aacgaagttg gctactcaaa caaagtatta gacttagttg ctcacgtata
    15241 taactacaaa ggttaattgc taagttatat tttaaatata gagccaaatt ctgaacggaa
    15301 tttggctctt ttgctgcgaa caataaattg aatatagtcg cgttttccca taaaatcaat
    15361 ttcctacaaa caggaactaa gcacagtaag gcagattttc ttgctctttg cagtttattt
    15421 tgtgtaaata aatattatta gagactacaa acgattaata aatatcaagt ttcctatgaa
    15481 aaatgatgtt tttattaatg ctatattgct ttttgagaga tgatttaaat tattgattat
    15541 aagtatggta agattaaagc ctgaatcggg atattcaggc ttaaaaataa tggtgcg
//
LOCUS       DANLZQ010000060        15536 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.060, whole genome shotgun sequence.
ACCESSION   DANLZQ010000060 DANLZQ010000000
VERSION     DANLZQ010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15536)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15536)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15536
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.060"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            1..170
                     /locus_tag="PXE50_001587"
                     /pseudo
     CDS             1..170
                     /locus_tag="PXE50_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_021111752.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            422..1612
                     /locus_tag="PXE50_001588"
     CDS             422..1612
                     /locus_tag="PXE50_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000616649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine--oxo-acid transaminase"
                     /protein_id="HDL5622497.1"
                     /translation="MSTSQQLIQQTEHFGANNYLPLPIVISKAKGIWVEDPEGNRYLD
                     MLSAYSAVNQGHCHPKIVQALKDQADKVTLTSRAFYNDQLGIWYEKICKLANKEMALP
                     MNTGAEAVETAIKTARRWGYDVKGIAENQAEIIACVGNFHGRTMAAVSLSSDPDYKRG
                     FGPMLGGIKLVPYGDLEALKAAITPNTAAFLVEPIQGESGILIPPEGFLEQAYELCKE
                     NNVLFIADEIQAGLGRTGKLFATEWEGFEPDIYILGKALGGGVFPISCVLANRDILGV
                     FNPGSHGSTFGGNPLACAVSIASIDVLLEEKLAERSRELGEYFLAELKKIQNPIIKEV
                     RGRGLFIGLELHQPARPFCEKLKEKGLLCKETHDTVIRFAPPLVIEKFNLDWALEKIR
                     EVLA"
     gene            1687..3198
                     /gene="nhaC"
                     /locus_tag="PXE50_001589"
     CDS             1687..3198
                     /gene="nhaC"
                     /locus_tag="PXE50_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HDL5622498.1"
                     /translation="MLILQTFSKNQPLVKGGFMSNRTEITDQNIRIPFRYAILPVIIM
                     VSIMAVAIIKFEASPHVPLLIGAISAAVIAMAHGYRWETIEKGIYRGIRMALPAIVII
                     IMIGLTIGAWLGGGIVATMIYYGLKLISPSLFLVTISIICAIVTLAIGSSWSTMGTIG
                     VAAMGIGFSLGIPAPMVAGAVISGAYFGDKMSPLSDTTNLAAGITETNLFEHIRHMFI
                     TTVPAFLIALSVYFYFGMEFRAENLDLAKIEDIMQAMQEHFLISPWLLLVPLLVVVLV
                     AKKVPALPALAAGIILGWLCHVFVQGGDVSVAVITLHDGYKIESGHEMIDKLFNRGGI
                     ESMMYTISLTIVAMTFGGIAEQAGMLHSVVEKILTLAKSAGSLISATIVSAFITNVTT
                     SEQYISILLPGRMYIKAYRDKGLSSRNLSRALEDGGTVTSVLVPWNTCGVYAFSMLQV
                     SAFEYAPYAIMNWLIPLIAIGLATLNIKIERLPPEELAKEPEEITLPKRGCCP"
     gene            3315..6914
                     /gene="putA"
                     /locus_tag="PXE50_001590"
     CDS             3315..6914
                     /gene="putA"
                     /locus_tag="PXE50_001590"
                     /EC_number="1.2.1.88"
                     /EC_number="1.5.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase PutA"
                     /protein_id="HDL5622499.1"
                     /translation="MMSYQLLPNTTIRPELSRHYRFDEQTLVQNLIEQAHCDEQADNI
                     KKLTTQLVGKVRTARQKASGVDALMHEFSLSSQEGVALMCLAEALLRIPDTATADKLI
                     RDKIAKGDWRSHTGNSPSLFVNAAAWGLVITGKLVSTHSESSLSSALSRLIAKGGEPL
                     IRKGVDVAMRMLGKKFVTGETIQQAIKNGEKRFAMGYRYSYDMLGEAALTAEDAKRYY
                     NDYVASIHAVGATSKGLGVYKSSGVSVKLSAIHPRYSLSQHQRVMDELYPRLKELFLL
                     AKKYDIGLNIDAEEADRLELSLDLMDRLLADPDLAGFNGIGFVVQAYQKRCPYVIEHL
                     IETARKHNRQLMIRLVKGAYWDTEIKRAQMDGAEGYPVFSRKVHTDLNYIVCAKKLLA
                     AQDVIYPQFATHNAQTLATIYHLAQGKRFEFQCLHGMGESLYDQVVGSDNLNVQCRIY
                     APVGTYQTLLAYLVRRLLENGANSSFVSQIVDENLSVDDLAQAPVQKAELTNGTMHPK
                     IPLPVDLFDDNRVNSKGYDLTDAVSLQNLENALNELTKQHYRAEPQLANDNTSGQESR
                     KIYNPANQAELVGEVIDATENDMEQAFESAAAFQSEWANTSPAVRAECLEKMADLMEA
                     NMPQLFDLAVREAGKTLNNAIAEVREAVDFCRYYAKEVRNNIEAYKNPRGIVVAISPW
                     NFPLAIFVGEVSSALVAGNVVLAKPAEQTSLMAHYAVSLFYQAGVPKAALQCLPGRGK
                     TVGVALVADHRVNGVIFTGSTETAKNINRNLHKNEKIIPLIAETGGQNAMIVDSSALG
                     EQVVIDVLNSAFDSAGQRCSALRVLYLQRDVADHILTMLKGAMAELKVGLPQHLTTDV
                     GPVIDKVAQQRLLDHIENLKKSAKSYYQVAISSEIAENGIFVPPTLLEIDHISQLKHE
                     VFGPVLHVIRFDADKLDQVIADINSTGFGLTSGLHSRIDETVDLWLKSVHAGNLYVNR
                     NTVGAVVGVQPFGGMGLSGTGPKAGGPLYLQRLVNRQEWTLNGLQGNAQAVDFDLNFA
                     IRKVLSGAEQQTALDLAKSLARRSPLGKTYPMQGITGEKNEMIFVARPQIGISKGNLA
                     SQVQALIAIVTVGSQAVAEKSSELAKHASAFGKKLQVVDDFNSLDHLSTLIVLDLLSS
                     EEKLHHAERKGAILTYIEGLDLALSLLPLVHEKAISINTAAAGGNASLMSEMD"
     gene            7023..7673
                     /locus_tag="PXE50_001591"
     CDS             7023..7673
                     /locus_tag="PXE50_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595-like element ISMha3 family transposase"
                     /protein_id="HDL5622500.1"
                     /translation="MRKSRLSQYKQHKLIELFVAGVIARTAAELVNVNKTTAAYYFHR
                     LRLLIYQHSPHLEMFEGEIEIDESYFGGHRKGKRGRGAAGKTAVFGLLKRDGKVYTVV
                     VPNTQSATLLPIIREKVKPDSLVYTDFYRSYDVLDVSEFNHFRINHSTHFAENQNHIN
                     GIENFWSQAKRHLRKFNGIPKAHFELYLKECEWRFNHSDLKSQIFLLKQLVKGGLG"
     gene            complement(7674..8561)
                     /locus_tag="PXE50_001592"
     CDS             complement(7674..8561)
                     /locus_tag="PXE50_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide transport protein"
                     /protein_id="HDL5622501.1"
                     /translation="MNKLTQLALISLAFTGSAFAAPKSFTYCLESSPAALNPQIATDG
                     ATLDVGQAIYNRLIDFEKGTTNLTPSLAERWEISEGGKIYTFFLRQNVQFQSNKSFTP
                     SRYFNADDVIFSINRQFDKTNPYHKLSGGNYEFFYGMNMQNIIKNVTKVDDYTVKIEL
                     SEPNAPFLANLAMDFMAIFSAEYANKMQIAGTPEKLDLEPIGTGAFQFYGYQKDAAVR
                     FTAFEHYWEGKAKIDRLVFSITPDASVRLAKLEKNECQAMPYPNPSDLSALKANKDIQ
                     LFEKSGLNIGYITFRGCPR"
     misc_feature    complement(8587..8732)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00514"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="His leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00514"
     gene            complement(8909..9919)
                     /gene="mglC"
                     /locus_tag="PXE50_001593"
     CDS             complement(8909..9919)
                     /gene="mglC"
                     /locus_tag="PXE50_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018355241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/methyl galactoside ABC transporter
                     permease MglC"
                     /protein_id="HDL5622502.1"
                     /translation="MSALQQNRTLDFFKQNAIYFVLLILLIVIIVQDPSFLSLRNFSN
                     ILSQSSVRLIIALGVAGLIVTQGTDLSAGRQVGLAAVISATLLQSMENMNKVFPNLSE
                     IPIPVVVLTVCAIGAVIGLFNGFVVAYLNVTPFIATMGTMIIVYGINSLYYDAVGSSP
                     IAGFSDDFSTFAQGFFRFGDFRLSYITIYAVIATIIMWTLWNKTRFGKNVFAIGGNPE
                     AARVSGVNVPLNLMGIYMLSGIFYAFGGMLEAGRIGSATNNLGFMYEMDAIAACVVGG
                     VSFAGGVGTIIGVVTGVLIFTVINYGLTYIGVNPYWQYIIKGGIIILAVAIDSLKYAK
                     KK"
     gene            complement(9933..11432)
                     /gene="mglA"
                     /locus_tag="PXE50_001594"
     CDS             complement(9933..11432)
                     /gene="mglA"
                     /locus_tag="PXE50_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005709009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/methyl galactoside ABC transporter
                     ATP-binding protein MglA"
                     /protein_id="HDL5622503.1"
                     /translation="MTGEVLLTMTNVSKSFPGVKALDNANLTVKSHSVHALMGENGAG
                     KSTLLKCLFGIYAKDEGDILFLGKPVNFKTSKEALENGISMVHQELNLVKQVTVMDNL
                     WLGRYPLKGPFVDHDKMYRDTKAIFDELDIDVDPRDKVAKLSVSQMQMIEIAKAFSYN
                     AKIVIMDEPTSSLSEKEVEHLFKIIQKLKDRGCGIIYISHKMDEIFKICDEITILRDG
                     KWVNTVAIKDTSMDQVVSMMVGRELTQRFPEKTNLPKEVILEVEHLTAKNQPSIQDVS
                     FSLRRGEILGIAGLVGAKRTDIVETIFGVREKAGGTIRLNDKEINNRNAFDAINNGFA
                     LVTEERRSTGIYANLSIEFNSLISNMKSYLGKFGLLSNKKMKSDTQWVIDSMNVKTPS
                     HQTHIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDIGAKFEIYQLILELANKDK
                     GIIMISSEMPELLGVTDRILVMSNGKVAGIVETAHTSQEEILQLAAKYL"
     gene            complement(11504..12493)
                     /gene="mglB"
                     /locus_tag="PXE50_001595"
     CDS             complement(11504..12493)
                     /gene="mglB"
                     /locus_tag="PXE50_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015701875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/glucose ABC transporter
                     substrate-binding protein MglB"
                     /protein_id="HDL5622504.1"
                     /translation="MKKAVLSAVAMAVALGATISTAQAENRIGVTIYKYDDNFMALMR
                     KEIEKEGKTQKVELLMNDSQNTQSIQNDQVDVLLSKGVKALAINLVDPSAYKTIIQKA
                     KSEDVPVVFFNKDPGAAAIDSYPKAYYVGTEPKESGIIQGELIAKQWKAHPELDLNKD
                     GKIQFALLKGEPGHPDAEARTKYVVESLKAQGIDSEQIFMDAALWDAAQAKDKVDAWL
                     SSGKAKDIEVIISNNDGMALGALEATKAHGRKLPIFGVDALPEALQLIKKGELAGTVL
                     NDGVNQGKAVVQLSANLADGKDAVAGTQWKLENRVVRIPYVGVDKDNLSEFLK"
     gene            complement(12768..13760)
                     /gene="mglB"
                     /locus_tag="PXE50_001596"
     CDS             complement(12768..13760)
                     /gene="mglB"
                     /locus_tag="PXE50_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/glucose ABC transporter
                     substrate-binding protein MglB"
                     /protein_id="HDL5622505.1"
                     /translation="MKRTILSAFALSVICGVNLSYAQSESRVGVTIYKYDDHFMTQMR
                     KDMQNEAKGFAGLKWFMNDAQNSQVKQLAQIETLLQHKMRVLAVNIVNANESKTIVEK
                     AKAYNVPVVFFNRTPSKQALESYEKAYFVSADPKEAGRIQGELIAKVWKSNPDFDLNK
                     DGKLQFVLLKGEPSDVSAERSQAVVESLNQQGVQAEEIYSDTARWRRTLARNKMNEWL
                     VENRAAEIEVVISNNDEMAIGALDALNAHEKRLPIFGIDALPETLALMKKGEIAGTVL
                     NDSSAQAKAVVKLVSNLAQGKPALKDTQWESHSSKTIYLPHIGIDKENLGQFLP"
     gene            complement(13845..14258)
                     /locus_tag="PXE50_001597"
     CDS             complement(13845..14258)
                     /locus_tag="PXE50_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PACE efflux transporter"
                     /protein_id="HDL5622506.1"
                     /translation="MTAWERVFHALLFECFAIIFTVILTSWLTSHRMVDLTAVIVMIS
                     VIAMVWNVIFNWGFDKVFTGERVQRGLGIRILHSFLFEGGLLVFTIPLVMYMLDIGWW
                     QAFVMDIGMTLFVLVYSVVFNWVYDHLRLRWVKSG"
     gene            14378..14665
                     /locus_tag="PXE50_001598"
     CDS             14378..14665
                     /locus_tag="PXE50_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcZ/YiiS family protein"
                     /protein_id="HDL5622507.1"
                     /translation="MKNDKPIECEGCNTFDVGSILDNSETVATIQRTYESENEAKAAL
                     EKFTQKARDVESEPCEISSEITPIESGFELVAHFKFSCQAEVVIFQLGTRF"
     gene            complement(14711..15517)
                     /locus_tag="PXE50_001599"
     CDS             complement(14711..15517)
                     /locus_tag="PXE50_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
                     /protein_id="HDL5622508.1"
                     /translation="MALAADLGYQTQVETLIKSLCYHHSHLKIYLFQKTFPNEWFDIW
                     CQKLALLSSEIIPVKVCVDFSKYKSLEHINETGFYRYLIPYLDEERVLYLDSDIVVDD
                     NLSEMYWLNFNGIPLYAVEDYVHNHIPAYLDLDLSPYFNSGVLLINNILWKKYSVCDE
                     LVTINEKIVNLTYGDQDALNIYFKGGWGALPIEYNYQVDAILELVLRREQEELARKNG
                     YLDVIPKIIHYTSKFKPWKKELHTMQISTRKKYWFYYHLEWNDILEQHQK"
BASE COUNT         4595 a         3273 c         3145 g         4523 t
ORIGIN      
        1 gaattgagaa tttttggagc caagcaaaac gccatttgcg taaatttaac ggcataccta
       61 aagctcattt tgagctgtat ttgaaggaat gcgaatagcg ttttaatcac agtgacttaa
      121 aatctcaaat ttccatttta aaacagttgg ttaggggttg tttaagttag ttatctagga
      181 cagccctaaa ttttgtagtt ggaatttcaa cggagaaagt tatctataaa cttacaaaag
      241 ttatagaaaa tggaggcatt tttgcttaaa gtatgctatc tattcatatt aattgcatag
      301 ttaatcaaca actgaagaaa aattagaagt agatcataaa atcaacaaaa agtccgtgct
      361 ttttagctaa agattgttaa actcttttgt gttacaagtt tttaacataa aggagttttt
      421 tatgtctact tctcaacaac tcatccaaca aaccgaacat ttcggtgcca ataactacct
      481 acctctacct attgttatta gtaaagctaa aggcatttgg gttgaagatc ctgagggtaa
      541 tcgctatttg gatatgctta gtgcctactc agcggttaat caagggcatt gtcatccaaa
      601 aattgtacag gcactaaaag atcaagcaga caaagtaacg ctgacctctc gagcatttta
      661 taacgatcaa cttggtattt ggtatgaaaa aatctgcaaa ctcgctaata aagagatggc
      721 attaccgatg aatacgggtg cagaagcggt agaaacagcg attaaaactg ctcgccgttg
      781 gggttatgat gtgaaaggaa ttgcagaaaa tcaagcagaa atcatcgctt gtgttggcaa
      841 ttttcacgga cgaacaatgg ctgcagtatc tctctcgtct gatccggatt ataaacgtgg
      901 tttcgggccg atgttaggtg gcatcaaact tgttccatac ggtgatttag aagcattaaa
      961 agctgcgatt acaccaaaca cagcagcgtt tttggttgag ccaatccaag gtgaatctgg
     1021 cattcttatt ccacctgaag gtttcttgga acaggcttat gaactatgca aagagaataa
     1081 tgtgctgttt attgctgatg aaattcaggc aggtcttggg cgtactggca agttatttgc
     1141 aacagaatgg gaaggctttg agccagatat ttatattcta ggtaaagcac ttggtggcgg
     1201 ggtgttccca atctcttgtg tgttagcaaa tcgtgatatt ttaggcgtat tcaatcctgg
     1261 ctcgcacggt tcgacatttg gtggtaatcc attagcctgt gcggtatcta ttgcctcaat
     1321 tgatgtactg ttggaagaaa aacttgcaga gcgttcccgt gagttaggtg aatacttctt
     1381 ggcagagctg aaaaaaatcc aaaatccaat tattaaagaa gttcgtggac gtggactgtt
     1441 tattggcttg gagttacatc aaccagcacg cccattctgc gaaaaactca aagaaaaagg
     1501 cttactctgc aaagagaccc acgatacagt tatccgcttt gctccccctt tggtgattga
     1561 aaaattcaat ttggattggg cattggagaa aattcgggag gtgttggctt aattgtcatt
     1621 ttctctatat tttatcctgc caaatcgcct ttaacccttt ttggcaggaa gcaaaacagt
     1681 tgtaaaatgc tgattttgca aactttttcc aaaaatcaac cgcttgtaaa aggtggcttt
     1741 atgtcaaaca gaacagaaat aacagaccaa aatatccgaa tcccgtttcg ctatgctata
     1801 ttgcctgtga ttattatggt atcgattatg gcggtggcta tcatcaaatt tgaagcctca
     1861 cctcacgttc cgttgcttat tggggcaatt agtgccgctg tgattgcaat ggcacatggc
     1921 taccgttggg agacaattga aaaaggaatt tatagaggca ttcgtatggc tttaccagcg
     1981 attgttatca ttattatgat tgggctaacc atcggagctt ggctaggtgg tggaattgta
     2041 gctacgatga tttactacgg cttgaaattg atctctccgt cgctgttttt agtaactatc
     2101 tcaataattt gtgctattgt gacccttgcg attggtagct cgtggtctac aatgggaaca
     2161 atcggtgtag cggcgatggg gatcgggttt agtctcggca ttccggcacc gatggttgcc
     2221 ggtgcggtga tctcaggagc atatttcggc gataaaatgt cgccactgtc agacactacc
     2281 aatctggcag cagggattac cgaaaccaat ctgtttgaac atatccgcca tatgtttatc
     2341 actaccgtgc cggcgttcct gattgcgtta tctgtctatt tctattttgg tatggaattt
     2401 agagccgaaa atctcgatct tgctaaaatt gaagacatta tgcaggcaat gcaggaacat
     2461 ttcttgattt cgccttggtt gctattagtg cctttattag tcgtggtgtt ggtggcaaaa
     2521 aaagtgcctg ccttaccggc attagctgca gggataattc ttggttggct ctgccacgtt
     2581 tttgtgcaag gcggtgatgt cagcgtagca gtgattactc tgcacgacgg ctataaaatt
     2641 gagagcggcc acgagatgat tgataagctg ttcaaccgtg gtgggatcga gtcgatgatg
     2701 tacaccattt cccttacgat tgttgcgatg acttttggtg gcattgcaga gcaagctgga
     2761 atgttacatt cagtagtgga aaaaatcctt acccttgcaa aatcagcagg tagcttaatt
     2821 agtgctacga ttgtatcggc atttattacc aacgtaacga catctgagca atatatttct
     2881 attttattac caggcagaat gtatataaaa gcctataggg ataagggact aagttcgaga
     2941 aacctttctc gtgcattgga agacggagga acagttactt cggttcttgt accttggaat
     3001 acctgtggtg tttatgcgtt ctcaatgttg caagtgagtg cttttgaata tgcaccgtat
     3061 gcaataatga attggctcat tccactgatt gcgattggct tggcaacctt gaatatcaaa
     3121 attgagcgat tgccaccgga agaattagcc aaagaacctg aggaaattac tctgccaaaa
     3181 cgtggttgtt gtccataatt tatctaaata gtatttaata acaataggtt aagttaaata
     3241 acaagcggtc ggttttatct taaaatttgc aagtttatac ataaatttga tcgcttgctg
     3301 tatagaaagg aaaaatgatg tcataccaac ttttacctaa caccactatc cgtcctgaat
     3361 tgagccgtca ttaccgcttt gatgagcaaa ccctggtgca aaatctgata gaacaagcac
     3421 attgtgatga acaggctgat aacattaaaa agctcactac ccaattagtc ggtaaagtcc
     3481 gaactgcacg ccagaaagca agcggggttg atgcgttaat gcacgaattt tcactctcca
     3541 gccaagaggg ggtggcgttg atgtgccttg ccgaagcatt actacgcatt cctgacaccg
     3601 ccactgcgga taaattaatt cgagacaaaa ttgccaaagg ggattggcgt tcacacaccg
     3661 gcaacagccc ctctctgttt gtgaatgcag cggcgtgggg cttggtgatt accggcaaat
     3721 tggtttcaac ccacagcgaa agctcactct catcagcact ttcacgcctg atcgccaaag
     3781 gcggagaacc gctgatccgc aaaggtgtgg acgtagcaat gcgtatgctc ggcaagaaat
     3841 ttgtaacggg cgaaaccatt caacaggcga ttaaaaacgg cgaaaaacgc ttcgcaatgg
     3901 gttatcgtta cagctacgat atgctgggcg aagcggcact caccgccgaa gatgccaaac
     3961 gctattacaa cgactatgtt gcctctattc acgctgtggg tgccacctcg aaaggcttgg
     4021 gcgtgtataa atcctcgggt gtgtcggtca aactctccgc cattcaccct cgttattccc
     4081 tttcccaaca ccaacgtgtg atggacgaac tctatccacg tctgaaagaa ctgttcttgc
     4141 tggcgaaaaa gtatgacatc ggcttgaaca ttgatgccga agaagccgac cgcctcgaat
     4201 tgtcgcttga tttgatggac agactgcttg ccgaccctga tttggcaggg tttaacggca
     4261 ttggttttgt ggtgcaggcg taccaaaaac gttgcccgta tgtgatcgag catttaattg
     4321 agaccgcccg taaacataat cgccagctaa tgattcgctt ggtaaaaggc gcatattggg
     4381 acactgaaat caagcgggcg caaatggacg gtgcagaggg ctatccggtc ttctcccgta
     4441 aggtgcatac cgatttgaac tacatcgttt gtgccaaaaa attgctggcg gcgcaagatg
     4501 tgatctatcc gcaatttgcc acccacaacg ctcaaactct cgccaccatt taccacttgg
     4561 cacagggcaa acgttttgag tttcaatgct tgcacggtat gggagagagc ttgtacgacc
     4621 aagtggttgg cagcgataat cttaacgtgc aatgtcgcat ttatgcccct gtcggtactt
     4681 atcaaaccct gcttgcctat ttagtacgtc gcttgttgga aaacggagcg aacagctcat
     4741 ttgttagcca aattgtggat gaaaatctca gtgtagatga tctggctcaa gcccctgttc
     4801 aaaaagcaga actgaccaat ggcactatgc acccgaaaat tccattgcca gtcgatttat
     4861 ttgacgacaa tcgtgttaat tccaaaggct atgatttaac tgatgcagta agcctacaaa
     4921 atttagaaaa tgccctcaat gaacttacca aacagcatta ccgtgctgaa ccacagctgg
     4981 caaatgataa tacaagcggt caagaaagcc gaaaaattta caatccagcg aaccaagctg
     5041 aattagtcgg cgaagtgatt gatgccaccg aaaacgatat ggaacaggcg tttgaaagtg
     5101 cggcggcgtt ccaaagtgaa tgggcgaata cttcccctgc ggtgcgtgcc gagtgcttag
     5161 aaaaaatggc ggacttgatg gaagccaata tgccacaact gttcgatttg gcggtgcgtg
     5221 aggcaggcaa aacgctcaac aatgcaattg ctgaagtgcg tgaagccgtc gatttctgtc
     5281 gttattatgc caaagaggta cgcaacaaca ttgaagcata caaaaatccg cgtggcattg
     5341 tagtagcaat tagcccgtgg aactttccgt tagcgatttt tgtgggtgaa gtttcatctg
     5401 cgttggtggc aggcaatgtg gtactagcaa aaccagctga acaaacttcg ttaatggcac
     5461 attatgctgt cagccttttc taccaagcag gtgtgccgaa agcggcgttg caatgcttac
     5521 cgggtagagg aaaaacggtt ggggtggcgt tggtggcaga tcatcgtgtg aacggcgtga
     5581 tttttactgg ttcaacagag acagctaaaa acattaaccg caatttgcac aaaaacgaga
     5641 aaattatacc gcttattgcc gaaactggcg gacaaaatgc aatgattgtt gatagctcgg
     5701 cactgggcga gcaggttgtg atagatgttt taaactccgc atttgactca gcagggcaac
     5761 gttgttcggc attgcgtgtg ctgtatctgc aacgtgatgt tgccgatcac attctcacaa
     5821 tgctcaaagg agcaatggcg gagttgaaag ttggtcttcc acaacactta actaccgatg
     5881 tcggaccagt aatcgataaa gtcgcacaac aacgcttgct cgatcatatt gaaaatctca
     5941 aaaaatcggc gaaaagttac tatcaggtgg ctatctcctc tgaaattgcc gaaaatggta
     6001 ttttcgtacc gccaacgctg ttagaaatag atcatatcag ccagcttaaa cacgaagtat
     6061 tcggaccggt gctacacgtt atccgttttg atgcggataa actcgaccaa gtgattgccg
     6121 acataaactc cacaggtttc ggtctaacca gcggtttgca tagccgaatt gatgaaacgg
     6181 tggatttatg gttgaaatct gtccacgctg gaaatctgta tgtaaaccgt aacacggtag
     6241 gggctgtggt cggcgtacag ccattcggtg gaatggggtt atcaggaact gggccgaaag
     6301 ctggcgggcc gctctatcta caacgtttag taaaccgcca agaatggaca ttgaacggtt
     6361 tacagggcaa tgcacaagcg gtcgattttg acttaaattt tgcaatccgc aaggttctaa
     6421 gtggagctga gcagcaaacg gcgttagatc tggccaaaag ccttgcacgc cgctcgccac
     6481 tcggaaaaac ctacccaatg cagggtatta ccggcgagaa aaacgagatg attttcgtgg
     6541 ctcgcccaca gattgggatt agcaaaggta atttggcttc acaggtgcaa gccttgattg
     6601 ccattgtaac ggtcggcagc caagcggtgg cagaaaaatc aagcgagctg gcaaaacacg
     6661 cctctgcctt tggtaagaaa ttacaggtgg tggatgattt caacagtctc gatcacctca
     6721 gcacactcat tgtgcttgac ctgctttcta gtgaggaaaa attgcatcat gccgaacgca
     6781 aaggggcgat tttgacctac atcgaagggc tggatttagc gctctcactg ctgccgttgg
     6841 tacacgagaa agcaatcagc atcaacaccg ctgccgcagg gggaaatgcc agcttaatga
     6901 gtgaaatgga ttaagcaaca aacaaaagag tataagaggg cagatcacaa tgatctgcct
     6961 ttttatttta aggggctgtc ctagataacg actaaaactt ccatttaggt taagataacc
     7021 ctatgagaaa aagtcgtcta agtcagtaca aacaacataa actcatagag ctgtttgtag
     7081 caggcgtaat cgctcgaaca gccgcagagt tagtgaatgt aaataaaacc accgcagcct
     7141 attattttca ccgtttgcga ttgctcatct atcaacatag ccctcatttg gaaatgtttg
     7201 agggagaaat tgagattgat gagagctatt tcggcggtca tcgcaagggt aaacgaggtc
     7261 gtggtgcagc aggcaaaacc gccgtattcg ggcttttaaa gcgtgacggc aaggtttata
     7321 ccgtagtagt gccgaacaca caatctgcta cacttttgcc gattattcgg gaaaaggtga
     7381 agcccgatag ccttgtttac accgattttt atcgaagcta tgatgtgctt gatgtgagtg
     7441 aatttaacca ttttcgtatc aatcacagca cacacttcgc agaaaatcaa aatcacatta
     7501 acggaattga gaatttttgg agtcaagcaa aacgtcattt acgcaagttt aatggtattc
     7561 cgaaagccca ttttgagcta tatttgaaag aatgcgaatg gcgttttaat cacagtgact
     7621 taaaatctca aatattcctt ttaaaacaat tggttaaagg ggggttaggt tagttatcta
     7681 ggacagcccc taaaagtaat ataaccgata tttaggcctg acttttcaaa taattgaata
     7741 tctttattcg cttttaaagc agacaaatct gacgggttcg gataaggcat cgcttggcat
     7801 tcgttcttct ccaatttagc taaacgtact gaggcatcgg gcgtaatact aaatacaagg
     7861 cgatctatct tcgcttttcc ttcccaatag tgttcaaatg ctgtaaatct taccgctgcg
     7921 tccttttggt aaccatagaa ctggaatgca cctgtgccta taggttctaa atctaatttt
     7981 tccggcgtac ccgctatttg cattttattt gcatattccg cagaaaagat cgccataaaa
     8041 tccatagcta aattagcaag aaagggggca ttcggttcag ataattcgat ttttaccgtg
     8101 taatcatcta cttttgttac atttttgatg atgttttgca tattcattcc gtagaaaaac
     8161 tcatagttac cgccggacaa tttgtgatat ggattcgtct tatcaaactg acggttaatc
     8221 gaaaaaataa catcatcagc attaaaataa cgactagggg taaaactttt attactctgg
     8281 aactgcacat tctgacgcaa gaaaaaagta taaatttttc cgccttcact gatttcccat
     8341 cgctctgcca gagaaggagt gaggttagtg gtaccttttt caaaatcaat caggcgatta
     8401 tagattgctt gcccgacatc aagagtagct ccatctgttg caatctgagg attcaatgct
     8461 gccggagatg attccaaaca gtaagtaaaa gatttaggtg ctgcgaaagc agaacctgta
     8521 aatgctaaag aaataagtgc aagttgtgtc agcttgttca ttgtcatatc cttaaatgtt
     8581 aagcaataaa aaaccctttc aaaagttgcc ttccgaaagg gttagaattg ggtttgcgat
     8641 tttggattgc gtttgccatt tcaggttttc ggaagatatc ttccgaacac gccaaatgcc
     8701 cgaaagatta atcggtcaaa tggtagtgat gatgtttaac gcaatagctc ataatattct
     8761 ccaaaattga atgtttagga atttacgctt tttaaaaatc aattgcaaac gttttcttta
     8821 aaattttgta aaaaattcaa catttttcac cgcttgtatc gtacctagga gcaaatggcg
     8881 atttgctcct aggtttccaa gcaataggct attttttctt cgcatattta agtgagtcaa
     8941 tcgctaccgc caagataatg atgccacctt taataatata ttgccagtaa gggtttactc
     9001 caatataggt taagccgtag ttgataacgg tgaagattaa cacccctgtt actacaccga
     9061 tgatagtacc cacaccaccg gcaaaggata ccccacctac cacacaagcg gcaatggcat
     9121 ccatttcata cataaagcct aagttgttgg ttgcactacc gatacgacct gcttctaaca
     9181 taccgccgaa ggcatagaag atgcctgaaa gcatataaat acccatcagg ttaagcggta
     9241 cgtttacacc ggaaactcgt gctgcttcag ggttgccgcc aatagcaaat acgtttttac
     9301 cgaagcgggt tttattccat aacgtccaca taataatggt agcaatcacg gcataaatag
     9361 tgatgtagga tagcctaaag tcgccaaagc ggaagaagcc ttgtgcaaag gttgagaaat
     9421 catcgctaaa gcctgcaatt ggcgatgagc ctactgcatc gtagtaaagc gagttgatac
     9481 catacacaat aatcattgtt cccatcgtgg caataaacgg tgttacgttg aggtaagcca
     9541 ccacaaagcc gttaaataaa ccaatgacag caccgatggc acacacggtt aatacaacca
     9601 caggaatcgg gatttccgag aggtttggga ataccttgtt catattttcc attgattgga
     9661 gcaaggtggc ggaaattacc gctgccaagc ccacttggcg accggcagat aagtctgtcc
     9721 cttgtgttac aatcaagcct gcaaccccta atgcaataat caaacgcaca gaagattgcg
     9781 ataaaatgtt actgaagtta cgcaagctca agaaacttgg gtcttgcaca ataatcacaa
     9841 taagtaagat taataatacg aagtaaatcg cattttgttt aaaaaaatcg agtgttctat
     9901 tttgttgtaa agcagacata cttcactcct tgttataaat attttgctgc gagttgcaag
     9961 atttcttctt gcgaggtgtg agcggtttcg acaatacctg caactttccc gttactcatc
    10021 actaaaattc ggtctgtgac cccaagcaat tccggcattt ccgatgaaat cataatgatg
    10081 cctttatctt tattcgccag ctctaaaatc aactggtaaa tttcaaattt tgccccgata
    10141 tcgataccac gggtcggctc gtcaagcatc aagatttcag gctgggttaa caaccaacgc
    10201 ccgataatca ctttttgttg gttaccgccg gaaagtgagc caatatgcgt ttgatgcgat
    10261 ggggttttta cattcatcga atcaattacc cattgggtat cgcttttcat ttttttattg
    10321 ctcagtaagc cgaacttgcc tagataagac ttcatatttg aaatcagaga gttaaactca
    10381 atgcttaagt tggcataaat ccctgttgaa cggcgttctt ctgtaaccaa tgcaaagccg
    10441 ttattaatcg catcaaaagc gttgcggtta ttgatttctt tatcgtttag tcggatagtg
    10501 ccgcctgctt tctcccgtac accgaaaatg gtttcaacaa tatcagtccg ttttgctcca
    10561 actaagccgg cgatgcctaa aatttcccct ctgcgtaagc taaagctgac atcttgaata
    10621 gagggttgat tttttgccgt taaatgctca acttcaagaa tcacttcttt cggcagattg
    10681 gttttttcag ggaaacgctg ggtcagctca cgccctacca tcattgaaac cacttgatcc
    10741 attgaggtat ctttaattgc aacggtgttt acccatttac cgtcacgcaa aatggtaatt
    10801 tcatcacaaa ttttaaaaat ttcgtccatt ttgtgtgaaa tatagataat gccacagcct
    10861 ctgtctttca gtttttggat aattttaaat aaatgctcga cttctttttc tgaaagtgac
    10921 gaagttggtt cgtccataat cacaattttg gcattgtaag agaaagcttt tgcaatctcg
    10981 atcatctgca tttgtgaaac cgataatttg gctactttat cacgtggatc aacatcaata
    11041 tctaattcat caaaaatcgc cttagtatca cgatacattt tatcgtgatc tacaaaaggc
    11101 ccttttagtg ggtaacgacc tagccataag ttatccatta ccgtcacttg ttttactagg
    11161 ttcaactctt ggtgaaccat tgagatccca ttttctaacg cctcttttga ggtcttaaaa
    11221 ttcaccggct tgccaagaaa gagaatatct ccctcatctt tagcataaat cccaaataag
    11281 catttcagta acgttgattt acctgctcca ttctctccca ttaaggcgtg aacactatgg
    11341 gatttcaccg ttaagttagc attatctaag gcttttaccc cgggaaatga cttgctaaca
    11401 tttgtcattg tgagtaaaac ttcacctgtc atatctcacc cctgattaca tcgaaaaatc
    11461 gaaaaaaagc acgggtatcc atcacccgtg ctaaaagcgt gaattatttt aaaaattcag
    11521 ataagttgtc tttatcgaca ccaacgtaag gaatacgcac cacacggttt tccaatttcc
    11581 attgtgtacc agcaactgca tctttaccgt ctgctaagtt agcagaaagc tgaacaaccg
    11641 ctttaccttg gtttacacca tcatttaata ccgtaccggc taattcacct tttttgatta
    11701 attgaagtgc ttctggcaat gcatctacac cgaagattgg taattttcta ccgtgagctt
    11761 tggttgcttc taatgcacct aacgccatac catcattatt agaaataatt acttcgatgt
    11821 ctttcgcttt accacttgat aaccaagcat ccactttatc tttagcttgg gctgcatccc
    11881 ataatgctgc gtccataaag atttgctcac tgtcgatacc ttgtgctttt aagctttcta
    11941 ccacatattt agtacgtgct tccgcatcag ggtgacccgg ctcacctttt aataaggcaa
    12001 attggatttt accgtcttta ttcaagtcta attcaggatg ggctttccac tgttttgcaa
    12061 ttaactcacc ttgaataatg cctgactctt tcggctcagt acctacataa taagctttcg
    12121 gatagctatc aatcgcagct gcacccgggt ctttattgaa gaacaccaca ggcacatctt
    12181 cactttttgc tttttgaata attgttttat aagctgatgg atccactaag ttaattgcta
    12241 atgctttaac ccctttagaa agtaatacat caacttggtc gttttgaata gattgcgtat
    12301 tttgcgagtc attcattaat aactcgactt tttgtgtttt accctctttt tcgatttctt
    12361 tacgcattaa tgccataaag ttatcgtcat atttataaat tgttacacca atacggtttt
    12421 cagcttgagc tgtactgatc gttgcaccta atgcgactgc cattgccact gcacttaata
    12481 ctgctttctt catagtagat cacctctttt atgtgtttat agggaaatga attgcttacc
    12541 ataagcaact tggtgcaaag tataactaat tttaaaaaaa caatccgtga tcattctcac
    12601 agaattaaga caaagtggag aaatttttaa ttttaagtat aaaatttgaa tattcgctct
    12661 attcaaatct gttggaagaa aagagaaagg atttgcaaga ttttactgaa aaatgaccgc
    12721 ttgttatcat caataagggg cgtatttata acgccccgct cctccattta aggtaaaaat
    12781 tgccctaaat tttccttatc aataccaata tgtggaagat aaatcgtttt agaggaatgg
    12841 ctttcccact gcgtatcttt cagcgcaggc ttaccttgtg ccaaattaga taccaatttc
    12901 accaccgctt tcgcttgtgc agagctatca tttaataccg tgccggctat ttcccctttt
    12961 ttcattaatg ctaacgtctc aggcaaggca tcaataccaa agatcggcaa tcttttctcg
    13021 tgtgcattta acgcatctaa agcaccaatt gccatttcat cattgtttga aatcacaact
    13081 tcaatctcag ctgcacggtt ttccaccagc cactcattca ttttattgcg agccaatgtt
    13141 ctacgccatc tcgccgtgtc actgtaaatt tcttctgcct gaacaccttg ttgattaagc
    13201 gattcaacca cagcttgaga acgctcagcg ctcacatcac tcggctcgcc cttaagcaat
    13261 acaaattgca atttcccgtc tttatttaga tcgaaatcgg ggtttgattt ccacactttc
    13321 gcaattaatt ccccttggat tctaccggcc tctttaggat cagcgctcac aaagtacgcc
    13381 ttttcgtaac tttctaacgc ttgtttactc ggtgtgcggt taaaaaagac aaccggcaca
    13441 ttataagcct tcgctttttc cacaatagtt ttcgactcat ttgcattcac aatattcacc
    13501 gccaacacac gcattttatg ctgaagtaag gtttcaattt gcgctaattg cttcacttgg
    13561 gaattttgtg catcattcat aaaccacttc aacccagcga agcctttcgc ctcgttttgc
    13621 atatccttac gcatttgagt cataaaatgg tcatcatatt tgtaaatcgt tacccccact
    13681 ctgctttcag attgtgcgta acttagattc acaccgcaaa taacagaaag tgcaaaagca
    13741 ctcaagattg tacgcttcat agaatgtccc tcttgctatg ccaaatatga accaattcaa
    13801 gcatagcgaa ttttgtgtaa ggaaaccgtg atctagttca caatttagcc agatttaacc
    13861 cacctcaggc gtaaatgatc gtacacccaa ttaaaaacta ccgaataaac taatacaaat
    13921 aaggtcattc caatatccat cacaaacgcc tgccaccagc cgatatcgag catatacatt
    13981 accaatggga tagtaaaaac cagcaaaccg ccctcaaaaa ggaatgaatg caaaatacga
    14041 atgcctaaac cacgttgcac tcgctcaccg gtaaacacct tatcaaaacc ccagttaaaa
    14101 ataacattcc acaccattgc aatcaccgaa atcatcacaa tcactgcggt taaatcaacc
    14161 atacgatgag aagtcagcca agaagttaag ataaccgtaa aaataatagc gaaacattca
    14221 aataacagcg cgtgaaacac acgctcccaa gcggtcattt ttcctccaaa ctttgcaaaa
    14281 taccaactaa atcaaataat cgttcactga tgattgcagg ttacgcaatt tagttttaaa
    14341 gtacctacat tattcatcaa tttagaagga ttagccaatg aaaaacgata aaccgattga
    14401 atgcgaaggc tgtaacacat ttgatgtagg ttctatttta gataacagcg aaacagtcgc
    14461 tactattcag cgcacttatg aaagcgaaaa tgaagctaaa gcggcacttg aaaaattcac
    14521 tcaaaaagcc cgtgatgtcg aatctgaacc ctgtgaaatc agcagtgaaa tcaccccgat
    14581 tgaaagcggt tttgaactgg ttgctcactt caaatttagc tgccaagcag aagtggttat
    14641 ttttcaatta ggaacacgtt tctaatacaa aaagctgatt caaacacttg aatcagcttt
    14701 tgtatgatag ctatttttga tgttgttcca aaatatcgtt ccactctaaa tgatagtaaa
    14761 accaatattt tttacgcgta gatatttgca ttgtatgcag ttcttttttc caaggtttga
    14821 atttactcgt atagtggata attttcggaa tcacatctaa atagccattt tttctcgcaa
    14881 gttcctcttg ttctcttctt aatactagtt caagaattgc atcaacttga taattatact
    14941 ctatcggcaa tgctccccaa ccgcctttaa agtaaatatt gagagcatct tgatcgccat
    15001 aagttaagtt tacaattttt tcattgatag taaccaactc atcacatact gaatacttct
    15061 tccaaagtat attattaatt aatagtaccc cagaattaaa ataagggctg aggtctaaat
    15121 caagataagc cggtatatga ttatgaacat aatcctctac tgcatataaa ggtataccat
    15181 taaaattaag ccagtacatt tctgataaat tatcatcaac cacaatatct gaatctaaat
    15241 atagtacacg ttcttcgtcc agatatggaa taaggtaacg ataaaaaccc gtttcattaa
    15301 tatgctctaa actcttatat tttgaaaaat ctacacagac tttcacagga ataatttcac
    15361 tcgataataa ggctaatttt tggcaccaga tatcaaacca ttcattagga aaagttttct
    15421 gaaatagata aatcttaaga tgagaatgat gataacaaag cgatttaatt aaggtttcaa
    15481 cttgagtttg atagcctaaa tcagctgcta atgcaataac tattggttgg ttggtt
//
LOCUS       DANLZQ010000061        15461 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.061, whole genome shotgun sequence.
ACCESSION   DANLZQ010000061 DANLZQ010000000
VERSION     DANLZQ010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15461)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15461)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15461
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.061"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            11..190
                     /locus_tag="PXE50_001600"
     CDS             11..190
                     /locus_tag="PXE50_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622509.1"
                     /translation="MFKEKGYDEFLAEKIRLGLEDMQSGNGLSLDESKARTKQLIERK
                     ARELANFEQENIIYG"
     gene            183..470
                     /locus_tag="PXE50_001601"
     CDS             183..470
                     /locus_tag="PXE50_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5622510.1"
                     /translation="MAKTLRISSRAQNDIEEILASVIEYTGFESSGIRLQEDIYQKFE
                     TIAYMPSAAGRLREDGTREAFTRRYRIVYTELENEVWIITIIHSSRLYPRI"
     gene            complement(596..2698)
                     /locus_tag="PXE50_001602"
     CDS             complement(596..2698)
                     /locus_tag="PXE50_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDL5622511.1"
                     /translation="MKSFKLLPVSAAVLSVLAANAVAQTASTDAVVLDTVTVTDNQGL
                     KVQSNVVTTKKKDESTQTDLRGLLKDEPAISLGGGNGTSQYLYIRGMGQNSIDVKVDN
                     TYSDSQILYHQGRHMLDPALVKIVSVQKGAGSASAGIGQTNGAVIAKTVDALDLLKNS
                     DKNFGAKLGTGFSTNHAHNFNATLYGKGEIFDALVSGNLVRDRDYKGGKDYVNQFGTN
                     RVPYSALDKTSFLAKLGATLGDHRFVLSHSSERNEGQRLVREEFDVAPNGTKVSPYNR
                     LTVERQAPANRRITVQRTNLEWTGKNLGFAQEATANVYQLVQGRWSENETGNGYAGGV
                     DYATKTKIVTHGANVNFDSALHENVLLKYGVNYRHQEAKPHTKFNPLVKNQEKTDTGV
                     YVEAITAPVDKVTLTTGVRYDHFKFKAMDGKERSNGAFSPSVGLIYEPIEHLSLSASH
                     NYATRSPRLYDALTAHGNRKIVSIGSNTKAEKARNTEIGFNYNNGTFSFDGSYFWQDI
                     KDALGGGRDSHNPNNELIMNLGKIKNRGYELNAGYHNGGFTARIGVAHSKPRFYSPTI
                     WEVNRQTGKREEKPLLSTNPEYASAIGRTWTASLSYRFEQPNLEVGVHHRIVEKVKPE
                     DNFFVTGGTLQTNTGTGKDGYNVTDITLNWKPLKDDSVNVNFAVDNVANKKYNAHGQR
                     GQLSARGREFRAGVNYTF"
     gene            2981..3727
                     /locus_tag="PXE50_001603"
     CDS             2981..3727
                     /locus_tag="PXE50_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDL5622512.1"
                     /translation="MQLRHKQIMEYIQQFDEANVQELAEHCGVSIETIRRDLNKLDKD
                     GLLHRTHGGAVSHKKRDIGRSFTTRQRLNSEAKRSIAENVLEYLQPESVIALDASSTS
                     WNVAQRIPNIPCTVVSSSMRIIYSLSHKPHIKTIATGGIYSEKYDAFYGPLSEQLLTR
                     LKIDLAILSCTGIADGAIWESNEINISLKRKLIANSKQVFLLADHSKFERKDLFRIED
                     LSCIDKLFINQPPPDFLKNYCLAHQIEIII"
     gene            3923..5686
                     /gene="fucI"
                     /locus_tag="PXE50_001604"
     CDS             3923..5686
                     /gene="fucI"
                     /locus_tag="PXE50_001604"
                     /EC_number="5.3.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005619331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose isomerase"
                     /protein_id="HDL5622513.1"
                     /translation="MTTLKSTPVKIGIRPTIDGRRLGVRESLEDQTMNMAKAVAQLIQ
                     SEVRHPNGDFVECVIADSTIGGVAEAAACAEKFKRENVGAVITVTPCWCYGSETIDMD
                     PHMPKAIWGFNGTERPGAVYLAAALAGHSQLGLPAFSIYGTEVQEADDQSIPDDVREK
                     LLHFARAGLAVATLRGKSYLSIGSVSMGIAGSIVNQQFFQEYLGMRNEYVDMTEIKRR
                     LDRHIYDAEEFKLAMSWVKTYCKEGIDVNAPENQRSPEEREKLWEDVVKMTIIARDLM
                     VGNPRLAELGYSEEALGNNAIAAGFQGQRQWTDHLPNGDFMEATLNSTYDWNGVRAPY
                     IMATENDSLNGVNMLFGNLLTGQAQIFADVRTYWSEDSVERVTGWRPESGFIHLINSG
                     SAALDGTGQHTDRAGKPTIKPAWEVTEEDGKRCLENTCWCPAVHEYFRGGLSSQFLTK
                     GGMPFTMHRINLIKGIGPVLQIAEGWSIDLPENVHDILNKRANETWPTTWFVPRLTGK
                     GAFTDVYSVMANWGANHCVATFGHVGADLITLASMLRIPVCVHNVEDKDVFRPSAWNG
                     FGQDKEGQDYRACANFGPLYK"
     gene            5880..7313
                     /gene="fucK"
                     /locus_tag="PXE50_001605"
     CDS             5880..7313
                     /gene="fucK"
                     /locus_tag="PXE50_001605"
                     /EC_number="2.7.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuculokinase"
                     /protein_id="HDL5622514.1"
                     /translation="MPISLIFDCGATNLRTIAINQAGEIVAAHHLPNNTQPDVESPEF
                     HIWDIEEIWSKLMTCAKQTLSQLSEQQRQEIVGISVTTFGVDGALFDKNGKQLYPIIS
                     WKCPRTLPIMENLANYLDVEALYQRNGVGHYSFNTLFKLLWLKENKPEIYQQAESFLF
                     ISSILTYLLTGVQTTDRTMAGTSMMTNIENDSWDKTVLDLLGLTENHFPPMKSAGEVV
                     GTLKGEISQELGLSGQIPVISCGHDTQFAIFGSGAGYNQPVLSSGTWEILMVRTPKAK
                     PQWQFVQNGLTIEFDSQSGYFNPGVQWVASGVMEWFGKRFFSDIANTEHYYRTMIEEA
                     AEVPAGSNGVKLVGNFDGTTAKTGSIIGLSMHITRGEIYRAGLEYMAHRLKEGLDVLQ
                     EVGHFNAESLICVGGGSKNALWNQIRADVLNRPIDVVDFPESTVLGAAMFTFTGAGVF
                     ENPNAAQQAVKPNVKRVEPSSNSQFYK"
     gene            7388..7819
                     /gene="fucU"
                     /locus_tag="PXE50_001606"
     CDS             7388..7819
                     /gene="fucU"
                     /locus_tag="PXE50_001606"
                     /EC_number="5.1.3.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012341412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose mutarotase"
                     /protein_id="HDL5622515.1"
                     /translation="MLKGIHPAISPDLLKVLAEMGHGDELVLSDAHFPAHSIHQNVIR
                     ADGLSVATLLEGISALFEFDQYVEAPLAMMQAVKGDTLDPSVEERYLNAIKKVNGTAP
                     KIERVERFAFYDRAKNAYAVVITGELAKYGNIIIKKGVTPV"
     gene            7879..8532
                     /locus_tag="PXE50_001607"
     CDS             7879..8532
                     /locus_tag="PXE50_001607"
                     /EC_number="4.1.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuculose-phosphate aldolase"
                     /protein_id="HDL5622516.1"
                     /translation="MDRKILARQIIDTCLEMTRIGLNQGTAGNVSVRYKDGMLITPTG
                     TPYEQMTEDSIVFVDGNGKHEEGKLPSSEWQFHLAVYEARPELNAVVHNHAKNCAAVS
                     ILGEPIPAIHYMIACTGTNHIPCVPYAPFGTHQLADYVREGIKHSKAILLAHHGLITA
                     DKTLEKALGIAHEVEVIAEWYLKLLATGKPIPTLNKEQMDIVLGKFKSYGSWVESEQ"
     gene            8594..10123
                     /locus_tag="PXE50_001608"
     CDS             8594..10123
                     /locus_tag="PXE50_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HDL5622517.1"
                     /translation="MQNEVILTMKNISKSFAGVNALKGVELTLRKGEVHALMGENGAG
                     KSTLMKCLLGVYQADEGEIIYKGQPVRFESVLEAQKAGISMIFQELNLIPHLTVAENI
                     FFAREPLKHGLVDKDKMVEESAKLLNFFEIDVDPNDEVRMLSVAKQQMVEIAKALSFD
                     VEVLIMDEPTSALTEKEIDKLFELVDRLRAKGVSIVYISHRMEELKRICNHITIFRDG
                     TYVSNHKFNEITMDEIITKMVGRSLDNHFPPKTAVVTNDIILSIMNAERKGVFEPLNF
                     DLRKGEILGITGLVGAKRTELARAIFGADPLDSGEIFVHENKVSIKDPSDAIKAGIAY
                     LSEDRKLNGVAVRMSIRENITMASMDKVANQIGVISYDEEEKASKTFIDKMEIKTPTI
                     EQKVQNLSGGNQQKVVIGKWLFREAKVMIFDEPTRGIDVGAKYAIYQLLDELAANGVG
                     VIVISSELPEVLGVSDRIIVMREGRMTGMLETKKTNQEEIMHYATGVKNMFAREYGVE
                     K"
     gene            10120..11118
                     /locus_tag="PXE50_001609"
     CDS             10120..11118
                     /locus_tag="PXE50_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5622518.1"
                     /translation="MNEKQKEMLRKMAALAGLVLLIIFFSVTNEYFFTSNNIMTVGLQ
                     TSTIALIGIGATCVILTGGIDLSTGSVVALSGVAAAMIVNAGVPVPLGMILGILVGGI
                     CGLINGILVTRMKLPPFIATLGMMMVARGLALYVTNAAPVSGMPESFANLGNGALFKI
                     VEEGANGLPKVVFAGIPYPVIIMIFITVLFTFALSKLKVGRYLYAIGSNEEAARLSGI
                     KTNIVKIYAYVASGLLSGLTGVILASRLVTAQPNGGVSYELDAIASAVVGGTSLMGGV
                     GTIPGTLIGSFIIGVLRNGLNMNGVSSFVQMIVIGLVIIVAVSLDQLRQSKKAGKK"
     gene            11142..12089
                     /locus_tag="PXE50_001610"
     CDS             11142..12089
                     /locus_tag="PXE50_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5622519.1"
                     /translation="MKKSALFTATLFGLSTLFAGSAMAKSDEIAVIVKSANSTFWQNV
                     RKGAETAGKDIGGQYKVTFQGPEAETAIDAQVNMVDNAVNRGVAGIVLAASDPVALVP
                     AVKKAYESGIPVVLIDSGINSDGKYYQSFLATDNRAAGKLAAEKLLAKVKGGKVAVMS
                     FTQGAASAIERTGGFIDEIKAKADYKLVGPYYSDSDMTKALNQTEDVLGSNPDLAAIF
                     GANEPTAVGMARAVKQKGFAGKIVAVGFDGNSDLQNFVRDGTLDGIVVQSSYQMGYKG
                     VDTIGKLIKGEKVEKVIDTGVVYVTKENIDSEEAKGVLY"
     gene            12145..12396
                     /locus_tag="PXE50_001611"
     CDS             12145..12396
                     /locus_tag="PXE50_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIB"
                     /protein_id="HDL5622520.1"
                     /translation="MSNTLTDKALVVIAALGGRENIVDVYACITRLRVEVKNTDIVEW
                     DKIKSVGALGVVTSGSVIQSIFGSDAEAYRDEIKRILNI"
     gene            12525..13676
                     /gene="fucO"
                     /locus_tag="PXE50_001612"
     CDS             12525..13676
                     /gene="fucO"
                     /locus_tag="PXE50_001612"
                     /EC_number="1.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactaldehyde reductase"
                     /protein_id="HDL5622521.1"
                     /translation="MANRLILNETSYHGKGAIQNIVHEVTSRSFKKALVVTDKDLIKF
                     NVAQKVTALLDAAGLPYEIFDEVKANPAVDVIKAGVAKFKASSADYLIAIGGGSPIDS
                     AKAIGIIINNPEFSDVLSLEGVAPTHQKCVPIIAIPTTAGTAAEVTINYVITDEAKKR
                     KFVCVDVHDVPAVALVDPDMMESMPKSLAAATGMDALTHAIEGYITKAAWELTDALHL
                     KAIELIGRSLRGAVEKNPKDVEAMALGQYVAGMGFSNVGLGAVHSMAHPLSAYYDTPH
                     GIANAVLLPYVMEFNKNYTGEKYREIARAMGVKGVDEMSQEEYRNAAIAAVQQLSQDV
                     GIPPKLHQIGVKEADLAALSVDAFNDVCTGGNPRDCTAEELLEVYRIAY"
     gene            13943..15388
                     /gene="aldA"
                     /locus_tag="PXE50_001613"
     CDS             13943..15388
                     /gene="aldA"
                     /locus_tag="PXE50_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HDL5622522.1"
                     /translation="MVKQHKMYINGEFVPALDGRTLAVYNPATEKAISEVPRGGADDA
                     KIAIDAAEAAQEAWERLPAIERGKYLRQIAVGIRERADEIARTISEEMGKTLSLATVE
                     VHFTADYLDYMAEWARRYEGEIIQSDRPNEHIFLYKKAIGVTTGILPWNFPFFLIARK
                     AAPALVTGNTIVIKPSEDAPNNAILFSEIVHQVGLPKGVFNVVTGYGNEVGPELSGNE
                     KIGMVSFTGSQFAGQKVMEAASKNIIKVNLELGGKAPAIVLDDADLELAATAVVNSRI
                     INSGQVCNCAERIYVQSSIKEQFVQKLVEKMQAVKYGNPLEQQDIDMGPMVNEKGLHK
                     VQEMVTHALHQGGNLVLGGNVVEGTGYYFEPTIIDNVDNSMDIMRHEIFGPVIPVATF
                     DTIDEAIRLANDCEYGLTSSVYTQNINKAMKVISRLKFGETYVNRENFEAMQGYHAGW
                     RKSGIGGADGKHGLEEYLQTQVVYLQFDDKV"
BASE COUNT         4641 a         3153 c         3393 g         4274 t
ORIGIN      
        1 ggagcagatt atgtttaaag agaaaggcta tgatgaattc ctagcagaaa aaattcgcct
       61 tggcttagaa gatatgcaat caggtaatgg tctttcactc gatgaatcaa aagcacgaac
      121 caaacaactg attgaacgta aagcaagaga actcgcaaac tttgaacaag agaatatcat
      181 ttatggctaa aacattacga attagcagta gagctcaaaa tgatattgaa gaaattttag
      241 cgagcgtaat tgaatatact ggttttgaaa gtagtggaat tcgcttacaa gaagatattt
      301 accaaaaatt tgagactatc gcttatatgc cctctgcggc tggacgttta agagaagatg
      361 gcacaagaga agcattcact aggcgttatc gtattgttta taccgaatta gaaaatgaag
      421 tgtggattat taccattatt catagtagca gactttatcc acgcatttaa ataacaaacg
      481 actaaaatag tcggtttttt atttgcaaaa aattaataaa atatcaccgc ttgtaagctc
      541 cataaaaaaa agcccgattg taacatcggg cgttttagtc tgaatttaag tcagattaga
      601 atgtgtagtt cacacctgca cggaattcac gtccacgagc tgataattga ccacgctgac
      661 cgtgtgcgtt gtatttttta ttcgccacgt tatccactgc gaagtttaca ttcacgctat
      721 catctttaag tggtttccag tttaaggtga tatcagttac attgtagccg tctttgcctg
      781 taccggtatt tgtttgtaat gttccgcccg taacgaagaa attatcttca ggtttcactt
      841 tctcaacaat acggtggtgt acgccaacct ctaaatttgg ttgttcaaag cgatagctta
      901 aagaagctgt ccaagtacga ccgatagctg aggcgtattc tgggttagta cttaataatg
      961 gtttttcttc ccgcttacca gtttgtctgt ttacttccca aatagttggt gagtagaaac
     1021 gcggtttgct gtgtgcaaca ccaatacgag cagtaaaacc accattatgg taacctgcat
     1081 ttaactcata accacggttt ttaattttac ctaggttcat aattaactca ttattaggat
     1141 tatggctatc acgaccacca cctaatgcat cttttatatc ttgccagaaa tagctaccat
     1201 caaaactgaa tgtaccattg ttatagttga aaccgatttc agtattacga gctttctccg
     1261 ctttagtatt gctaccaata ctaacgattt ttctatttcc gtgagccgtt agtgcatcgt
     1321 ataaacgagg gctacgagtt gcatagttgt ggcttgcact taagcttaaa tgttcaattg
     1381 gctcatagat aagcccaacg cttgggctga atgcaccatt actacgctct ttaccatcca
     1441 ttgctttgaa tttgaagtgg tcgtaacgta caccggtagt taaagttact ttatctactg
     1501 gagcagtaat tgcttcaaca tacacgccgg tatcggtttt ctcttggttt ttcacaagag
     1561 ggttaaattt agtgtgtggt ttagcttctt ggtggcgata gttcacaccg tattttaata
     1621 atacattttc gtgaagggca gaatcaaagt ttacgtttgc accgtgggtt actattttag
     1681 ttttggttgc ataatctaca ccaccagcat aaccattacc tgtttcattc tcagaccaac
     1741 gaccttgtac taactgatac acgttagctg ttgcttcttg agcaaaacct aagtttttac
     1801 cagtccattc taagttagtt ctttgaaccg taattctacg gttagctgga gcttggcgtt
     1861 ctacagttaa gcggttgtac ggagaaacct ttgtgccgtt aggtgctaca tcaaattctt
     1921 cacgcactaa acgctgacct tcatttcgct cacttgaatg gcttaataca aaacggtgat
     1981 ctcccaatgt tgcacctaat ttagctaaaa agctggtttt atctagtgca ctatacggaa
     2041 cacggtttgt gccgaattgg tttacgtaat ctttaccgcc tttatagtcg cgatctctca
     2101 caagattacc tgagactaaa gcatcaaaga tttcgccttt accatataag gttgcattga
     2161 aattgtgagc gtggtttgtg ctgaagccag tacctaattt tgcaccgaag tttttatcgc
     2221 tgttttttaa taaatctaat gcatcaacgg ttttagcaat tactgcacca ttagtttgac
     2281 caataccggc tgaagcactg cctgcacctt tttgtacaga aacaattttc accaatgccg
     2341 gatctaacat atgacgacct tggtgataca aaatttggct atctgagtaa gtgttatcta
     2401 cttttacatc aattgagttt tgacccatac cacgaatata gagatattgt gatgtaccgt
     2461 taccaccacc taagctaatt gccggctcat cttttaataa accacgcaaa tcggtttggg
     2521 tgctttcatc ttttttctta gttgttacca cattgctttg tacttttaaa ccttgattat
     2581 ctgttacggt aacagtatct aatactactg catctgttga agcagtttga gccactgcat
     2641 tagcagcaag tacgctcaat accgcagcag aaacagggag caatttgaag cttttcattt
     2701 tatttatatt ccttaggtaa attatttaag aggattatct gtttgatatt aaaaataatt
     2761 ctcaacacca aacgttcgca aattttacag agataaaaat gattgtcaat tagtctgaaa
     2821 tgaaatttca caaaatatat tacaaatttt acaaaaagtt ccctaaattt aaccgcttgc
     2881 aacacaaaat gtgatcgcct tctaaaaatc aaatttgctt gctcgacagt aacgctacaa
     2941 gcggttaaat ttggagaaaa atttacaaaa aggatagatt atgcagctgc gacacaaaca
     3001 gataatggaa tatatacaac agtttgatga agctaacgtt caagaattgg cggaacattg
     3061 tggggtttcg attgaaacta tccgccgaga tttaaataag ctagataaag atggattatt
     3121 acatcgcact cacggtggag ctgtgagcca taaaaagcga gatattggtc gctcatttac
     3181 cacccgacaa cggctgaaca gtgaggcgaa acgcagtatc gcagaaaatg tgttggaata
     3241 tttacaacca gaatcggtga ttgctttaga tgccagctca acctcttgga atgtggcaca
     3301 gcgtattcca aatattcctt gcaccgttgt cagcagttca atgcggatta tctacagcct
     3361 ttcacacaaa ccgcacatta aaacgattgc caccggtggt atttattccg aaaaatacga
     3421 tgccttctat ggtccattat ccgagcagtt actgacccgt ttaaaaattg atcttgccat
     3481 tctttcttgt acaggcattg ccgatggggc gatttgggaa tcaaatgaaa ttaatatttc
     3541 ccttaaacgt aaattaattg cgaacagtaa acaggttttt ttattagccg atcacagtaa
     3601 atttgagcgt aaagacttgt ttcgtatcga agatttatct tgcattgata aattatttat
     3661 caaccaaccc ccaccggact ttctcaaaaa ttattgctta gcacatcaaa ttgaaatcat
     3721 tatttagtga tttctgcccg attttattca gaaataaaac aaatcgggca ttcttttttc
     3781 actcattttt accaaaatcc cccatttttt gtgatcgcac tcacaaaatt taaactaaat
     3841 tcgcattttt cttcataact catattgcgt atgcataata aattcaatcg caaatttttt
     3901 taaccaatcg ggagaactat ttatgacaac gttgaaatct acccctgtaa aaattggtat
     3961 ccgcccaacc attgacggtc gccgtttagg agtgcgtgaa tcacttgaag atcaaacaat
     4021 gaatatggca aaagccgttg cacaattaat tcaatctgaa gtccgccacc caaatggtga
     4081 tttcgttgaa tgtgtgattg ctgattccac catcggtggt gttgccgaag ctgcggcttg
     4141 tgcagaaaaa ttcaaacgtg aaaatgtcgg agcggtgatt accgtaaccc cttgctggtg
     4201 ctacggttct gaaaccattg atatggaccc acatatgccg aaagccattt ggggctttaa
     4261 cggaacagaa cgcccaggtg cagtttattt agctgctgct ttagcaggtc atagccaatt
     4321 aggtttaccg gcattctcca tttatggcac agaagtacaa gaagctgacg atcaatctat
     4381 tccagacgat gtgcgtgaaa aattactcca ctttgcccgt gccggcttag cagtggcaac
     4441 cttacgagga aaatcatatt tatctatcgg ctctgtttca atgggtattg ccggttctat
     4501 cgtaaaccaa caattcttcc aagaatattt gggtatgcgt aacgaatatg tggatatgac
     4561 cgaaattaaa cgccgtttag atcgccatat ttacgatgcc gaagaattta aattagcaat
     4621 gagctgggtg aaaacctatt gcaaagaagg tattgatgtc aacgcaccgg aaaatcaacg
     4681 cagcccggaa gagcgtgaaa aactctggga agacgtggtg aaaatgacca ttattgcccg
     4741 tgatttaatg gtgggtaatc ctcgcttagc agagctaggc tatagtgaag aagccttagg
     4801 gaataatgcg attgctgccg gtttccaagg gcaacgccaa tggacagacc atttgccaaa
     4861 cggcgatttt atggaagcta ccttgaattc gacctatgac tggaacggcg ttcgcgcacc
     4921 atacattatg gcaactgaaa acgacagctt aaatggcgtg aatatgttgt tcggtaactt
     4981 attaaccggt caggcacaaa tctttgccga tgtgcggaca tactggagcg aagactcggt
     5041 agaacgtgtc accggctggc gtccggaaag cggttttatc cacttaatca actccggctc
     5101 tgcggcgtta gacggaacag gtcagcatac cgatagagca ggcaaaccaa ctattaaacc
     5161 ggcttgggaa gtgactgaag aagacggtaa acgttgttta gaaaacacct gttggtgtcc
     5221 ggcagttcac gaatatttcc gtggtggttt atcttcccaa ttcttaacca aaggtggaat
     5281 gccgtttacg atgcaccgta tcaacctgat caaaggtatc gggccggttt tacaaattgc
     5341 cgaaggttgg tctatcgact tgccggaaaa tgtacacgac attttaaaca aacgcgccaa
     5401 tgaaacctgg ccgaccactt ggttcgtacc tcgcttaacc ggaaaaggcg catttaccga
     5461 tgtgtatagc gtaatggcga actggggtgc aaaccactgt gtggcaacct tcggacacgt
     5521 tggggcagac ttaattaccc tcgcctcaat gctccgcatt ccggtttgtg tgcacaatgt
     5581 ggaagataaa gacgtattcc gcccaagtgc gtggaacggt ttcggtcaag acaaagaagg
     5641 tcaagactac cgtgcttgtg ctaacttcgg accattatat aaataataca caatcaccct
     5701 ctccccttgt gggagaggga cagccaagca attcgttcag aattgaatgg cagggagagg
     5761 gctacaagcg gtcgcttttc tctcaaaatt tacaaatccc tctctctgat taaattgcta
     5821 aacgcaattt aatctatctc tctaaaaggg agatattagg ataagtaaag gagataacaa
     5881 tgccaatttc tcttattttc gactgtggtg ccaccaacct ccgtacgatt gcgattaatc
     5941 aagcgggtga aattgtggca gcccatcatc taccgaataa cacacaacca gatgtggaaa
     6001 gcccagaatt tcatatttgg gatattgaag agatctggtc gaaattaatg acctgtgcca
     6061 aacagacgct ttctcaactt tcagaacaac aacggcaaga gattgttggg atttcagtaa
     6121 ccacctttgg cgtggacggt gcattatttg acaaaaacgg caagcagctt tatccgatca
     6181 tttcttggaa atgcccgaga accctaccga ttatggaaaa ccttgccaat tatcttgatg
     6241 ttgaggcgtt atatcaacgt aatggcgttg gacattatag tttcaacacc ttattcaaat
     6301 tattgtggtt aaaagagaac aaaccagaaa tttatcaaca agctgagagt ttcttattca
     6361 tctcatctat tttgacttac cttcttacag gcgtgcaaac aaccgaccgc acaatggcgg
     6421 gaacgtcaat gatgacaaac atcgaaaacg attcgtggga taaaacagtt ttagatttat
     6481 taggcttaac cgaaaaccat tttcctccaa tgaaaagtgc aggagaagtt gtgggaacat
     6541 taaaaggaga aatttcccaa gagttaggtt taagcggtca aattccagta atttcttgcg
     6601 gacacgatac tcaatttgcc atttttggct caggagctgg ctataaccaa cctgtgttaa
     6661 gttcaggcac ttgggaaatt ttaatggttc gtaccccaaa agcaaaacca caatggcaat
     6721 tcgttcaaaa cggcttaacc attgagtttg atagccaatc tggttatttc aacccaggtg
     6781 tgcagtgggt agcttcaggt gtgatggagt ggtttggcaa acgtttcttc tctgatatag
     6841 ccaatactga acattactac cgcacaatga ttgaagaagc ggcagaagtg cctgctggct
     6901 caaacggtgt gaaattagtc ggcaattttg atggcacaac agctaaaaca ggttcaatta
     6961 tcggcttatc tatgcacatc actcgtggcg aaatttaccg tgcaggcttg gaatatatgg
     7021 ctcatcgtct aaaagaaggg ttagatgtat tacaagaagt cggtcatttt aatgctgaga
     7081 gtttgatttg tgtgggaggt ggttctaaaa acgctttatg gaatcaaatt cgagccgatg
     7141 tcttaaatag accgattgat gtagtggatt tccctgaaag taccgtatta ggcgcggcaa
     7201 tgtttacttt tacaggtgct ggtgtatttg aaaatccaaa tgcggctcaa caggcagtga
     7261 agccaaatgt gaaacgggtt gagccatcgt caaatagtca attttataaa taaagtttct
     7321 cccctctctc tgatttgagg ttcattcaga acatcaaatc agagagaggg taaaaaagga
     7381 gttcaaaatg ttaaaaggta ttcacccggc aatttctcca gatttattaa aagtcttagc
     7441 cgaaatgggg cacggcgatg aattagtgct ttctgatgca cacttccctg ctcactctat
     7501 tcatcaaaac gtcattcgtg cagatggctt aagtgttgcc accttattag aaggcatttc
     7561 tgctctgttt gaatttgacc aatacgttga agccccactt gcaatgatgc aagcagtaaa
     7621 aggcgacacg ctcgatccaa gcgttgaaga gcgttacctc aatgcaatta aaaaagtaaa
     7681 cggaacagcc ccgaaaatag agcgtgtaga acgcttcgct ttctatgata gagccaaaaa
     7741 cgcttatgcc gttgtcatta caggcgagtt agccaaatac ggcaacatta ttatcaaaaa
     7801 aggcgtaaca ccggtttaat tacaagcggt taaaaaagca gaatttttta caaatataaa
     7861 attaaaagga gttcaacaat ggacagaaaa atactggcga gacaaatcat tgatacttgt
     7921 cttgaaatga cccgaattgg gttaaatcaa ggtacagcag gcaatgtgag cgtacgttat
     7981 aaagacggta tgctcattac gccaacaggt acaccttatg agcaaatgac cgaagattct
     8041 atcgtctttg ttgatggcaa cggcaaacac gaagagggaa aactcccttc aagtgagtgg
     8101 cagttccatt tagcggttta tgaggctcgc cctgaattaa atgcggtagt tcacaaccac
     8161 gctaaaaact gtgccgcagt gtctatttta ggtgaaccta tccctgccat tcactatatg
     8221 atcgcctgca ccggcactaa tcacattcct tgtgtacctt atgccccgtt cggcactcac
     8281 caattagccg actatgtacg tgaaggcatt aaacacagca aagcaatttt actcgctcac
     8341 cacggcttaa tcaccgcaga taaaaccctc gaaaaagccc tcggcatcgc ccacgaggtg
     8401 gaagtgatcg cagaatggta tttgaaactg ctcgctacag gaaaacctat cccaacgcta
     8461 aacaaagaac aaatggatat cgtactcgga aaatttaagt cctatggttc ttgggtggaa
     8521 agcgaacaat agcctgccat aaataacata caagcggtga tatttcttaa aatttttaca
     8581 aacggagtgc agtatgcaaa atgaagtaat actcacgatg aaaaacatca gtaaatcctt
     8641 tgcgggggtc aatgcgttaa aaggtgttga gcttacgctg cgtaagggcg aagttcacgc
     8701 attaatgggc gaaaacggtg caggtaaatc caccttgatg aaatgcttgc tgggcgtata
     8761 tcaagccgat gaaggtgaaa tcatatataa aggtcagcct gttcgctttg agtcggtatt
     8821 agaggcacaa aaagcgggca ttagtatgat tttccaagaa ctgaacctca ttccccattt
     8881 aacggtggca gagaatattt tcttcgcccg tgagccactc aaacacggtt tagtggataa
     8941 agacaaaatg gtggaagaat cggctaaatt gctgaatttc tttgagattg atgttgatcc
     9001 aaacgatgaa gtgagaatgt tgtcggtagc caaacaacag atggtagaaa ttgccaaagc
     9061 cctttcattt gatgtggaag tactgattat ggacgagccg acctccgctc ttaccgaaaa
     9121 agagatcgat aaattatttg aattggtcga tagactgcgt gccaaagggg tgagcattgt
     9181 ctatatttct caccgaatgg aagaattaaa acgtatctgt aaccatatta cgattttccg
     9241 tgatggcacc tatgtatcta accataaatt caatgaaatc acgatggatg agatcattac
     9301 caaaatggtt gggcgttcat tggataacca tttcccacca aaaaccgctg tggtgacaaa
     9361 cgacattatc ctctcgatta tgaatgctga acgtaaggga gtgtttgaac cattgaactt
     9421 tgacttacgc aaaggagaaa ttctgggcat taccggcttg gttggagcaa aacgtactga
     9481 actggctcga gccatcttcg gagcagaccc acttgatagc ggtgagattt ttgtgcacga
     9541 gaacaaagtc agcattaaag atccgagtga tgcaattaaa gccggtatag cctatttgtc
     9601 ggaagaccgt aagctcaatg gtgttgcagt aagaatgtcg attcgtgaga atatcacgat
     9661 ggcatctatg gataaagttg ccaatcaaat aggtgtgatt tcttacgatg aagaagaaaa
     9721 agcctcaaaa actttcatcg acaaaatgga aatcaaaacc ccaacgattg agcagaaagt
     9781 tcaaaactta agtggtggta accaacaaaa agtggtaatt ggtaaatggt tattccgtga
     9841 agcaaaagtg atgatttttg atgagccgac tcggggaatt gatgtcggag caaaatatgc
     9901 tatctatcaa ctgctcgatg agcttgctgc caatggcgtg ggtgttatcg tgatctcttc
     9961 cgaattgcct gaagtcttgg gagtttccga ccgcatcatt gtaatgcgtg aaggtagaat
    10021 gacaggtatg ctcgagacta aaaaaaccaa ccaagaagaa attatgcatt atgcaactgg
    10081 tgttaaaaat atgtttgctc gtgaatatgg ggtggaaaaa tgaatgaaaa acaaaaagaa
    10141 atgttaagaa aaatggctgc attggctggc ttagtactat taatcatctt tttcagcgta
    10201 accaatgaat acttctttac ctccaataac attatgacag tagggctaca aacctctacc
    10261 attgcgttaa ttggtattgg ggcaacctgt gtgatcttaa ccggtggaat tgatttaagt
    10321 accggttcag tagttgcact ctccggtgtg gcagctgcaa tgattgtaaa tgccggtgta
    10381 cccgtaccac taggaatgat tttagggatt ttggtcggcg gtatttgtgg cttaatcaac
    10441 ggcattttag tcaccagaat gaaattgcct ccgtttattg ctaccctcgg tatgatgatg
    10501 gttgcccgtg gtttagcatt gtatgttacc aatgccgcac cagtttccgg aatgcctgaa
    10561 tcctttgcca atctcggtaa cggagcatta tttaaaattg tggaagaagg ggcaaacggc
    10621 ttgccgaaag tggtatttgc aggtattcct taccctgtga ttattatgat ctttattacc
    10681 gtactattca ctttcgctct ctctaaactg aaagtcggac gctatcttta cgcaattggt
    10741 tctaacgaag aagccgcacg cttatccggc attaaaacca atattgtcaa aatctatgcc
    10801 tatgttgcca gtggcttact ctctggttta actggcgtta tccttgcctc ccgcctcgtc
    10861 accgcccagc caaacggtgg ggtctcttac gagctggatg cgattgccag tgctgtggtg
    10921 ggcggcacat cgcttatggg cggtgtgggt actatccccg gcacactcat cgggtcattc
    10981 attatcgggg tactccgtaa tggtttgaat atgaatggcg tttcttcatt tgttcaaatg
    11041 attgtcatcg ggcttgtgat tatcgtggcg gtctctctcg accagctccg ccaatccaaa
    11101 aaagccggta aaaaataatc cactcttaaa ggagaattaa aatgaaaaaa tcagcattat
    11161 ttactgcgac cctctttggt ttatcgacct tatttgcagg cagtgcaatg gcaaaatctg
    11221 atgaaatcgc tgtgattgtg aaatctgcca actctacctt ctggcaaaac gtgcgtaaag
    11281 gggctgaaac tgccggcaaa gatattggag gacaatacaa agtcaccttc caagggccgg
    11341 aagccgaaac agcgattgac gcccaagtga atatggtgga caacgccgta aaccgtggcg
    11401 tggcaggcat cgtactggct gcctcagacc cggtagcatt agtgccggcg gtgaaaaaag
    11461 cttatgagag tggcattccg gtggtgctta tcgattccgg catcaacagt gacggcaaat
    11521 actaccaatc tttccttgcc accgacaacc gtgcagcagg taaattagca gcggaaaaac
    11581 tgcttgccaa agtcaaaggc ggcaaagtgg cagtgatgag ctttacccaa ggggcagcat
    11641 cagcgattga gcgtaccggt ggttttattg acgaaatcaa agcaaaagcc gattacaaac
    11701 tggtcggccc gtactactcc gattcggata tgaccaaagc gttaaaccaa accgaagacg
    11761 tattaggttc taaccctgat cttgcagcga tcttcggggc gaacgaaccg actgcggtag
    11821 gaatggcacg agcggtgaaa caaaaaggct ttgccggcaa aattgtagcg gtgggctttg
    11881 atggaaactc cgacctacaa aacttcgtgc gtgacggaac actagacggc atcgtggtgc
    11941 aatcttccta ccaaatgggc tataaaggcg tggacaccat cggcaagctg attaaaggcg
    12001 agaaagtcga aaaagtgatt gataccgggg tggtttatgt cacgaaagaa aacattgata
    12061 gcgaagaagc gaaaggtgtt ctttactaac attcaagtta aacggggtgg ggttgcccac
    12121 cctttcagcc gaaaggaagc caatatgtca aataccctta ccgataaagc cttagtggtg
    12181 attgccgcac ttggcggtcg agaaaatatt gtcgatgttt acgcctgtat tacccgccta
    12241 cgtgtggagg tgaaaaatac cgacattgtg gaatgggata aaattaaatc tgtcggtgcg
    12301 ttaggcgttg tgacctcagg ctcagttatt caatctattt ttggtagcga tgccgaagcc
    12361 taccgtgatg aaatcaaacg tattttgaat atttagccta agcacactca caacaaaaga
    12421 atcgcaacaa gcggtgaaat ttttatcaaa atttgcaaaa aaatgacgta atttgaccgc
    12481 ttgcaagtta atcgaattgt ttaactttta agaaggaaaa tagtatggca aatcgtctta
    12541 tcctcaatga aaccagttac cacggcaaag gagcaatcca aaatattgtt cacgaagtga
    12601 ccagccggag tttcaaaaaa gcccttgtgg taacagacaa agacctgatc aaatttaacg
    12661 ttgcccaaaa agtcaccgcc ttgcttgatg ccgcaggctt gccttatgag attttcgatg
    12721 aggtcaaagc caacccggca gtcgatgtga tcaaagcggg ggtcgcaaaa ttcaaagcct
    12781 ccagtgccga ttatttaatt gcgattggtg gcggctcacc gattgatagt gccaaagcga
    12841 ttggtattat catcaataac cctgagttta gcgatgtact ttcattggaa ggtgtcgccc
    12901 caacccacca aaaatgtgtg ccgattatcg ccattccaac taccgcaggt acagccgcag
    12961 aagtcacgat taactatgtc attaccgatg aagcgaaaaa acgcaaattt gtgtgcgtgg
    13021 acgttcacga tgtgccggca gtggcgttag tcgatccaga tatgatggaa tctatgccga
    13081 aaagcttggc tgccgcaacc ggtatggacg ctctcaccca cgccattgaa ggctacatta
    13141 ccaaagcggc gtgggaatta accgatgctc tacaccttaa agcgattgag ctgatcggcc
    13201 gttcattgcg tggtgcagtg gagaaaaatc cgaaagatgt cgaggcaatg gcattgggac
    13261 aatatgtggc tggaatgggc ttctccaacg ttgggcttgg cgcggttcac agtatggcac
    13321 acccgctttc tgcctattac gacaccccac acggcattgc caacgcagta ttactgccgt
    13381 atgtgatgga atttaataaa aattacaccg gcgaaaaata ccgtgaaatt gcccgagcaa
    13441 tgggggtaaa aggcgtagat gaaatgagcc aagaagagta ccgcaacgcc gccattgctg
    13501 ccgtacaaca gctttcacaa gatgtcggca ttccgccaaa actgcatcaa atcggcgtta
    13561 aagaagccga tttagcggca ttatcggtcg atgcctttaa tgatgtctgc accggtggca
    13621 acccgagaga ttgtacggct gaggagctgt tggaggtata tcggatcgca tactaagttc
    13681 tatctttgtt aaatagacaa gcggtgattt tttaataaaa atttgcaatt tctgttaaaa
    13741 aaatactgat agtcataatg cccgatttct catatttatg gaaaaatcgg gcattttcgt
    13801 tgctttttta tcgccaagaa atgtgatttt gttcacattt atatctataa attaacaaaa
    13861 ataaaacaat ttgtttgcaa aggcggttca gttaccgaat gatagtcatc aacttccact
    13921 gtggataaaa aaggagcaac tcatggtgaa acaacataaa atgtatatta atggtgaatt
    13981 tgtgcctgcg ttagatggtc gcactttagc agtctataac cctgccaccg aaaaagctat
    14041 ctccgaagtc cctcgtggcg gagctgatga tgccaaaatc gctatcgatg ctgctgaagc
    14101 cgcccaagaa gcttgggaac gtttaccagc gattgaacga ggaaaatatt tacgtcaaat
    14161 tgctgtgggg attcgtgagc gtgccgatga aattgctcgc actatttccg aagaaatggg
    14221 taaaactctg tccttagcaa ccgttgaggt acattttacc gctgactact tagactatat
    14281 ggcagaatgg gcgagacgtt atgaagggga aattatccaa agtgatcgcc caaatgaaca
    14341 tattttccta tacaaaaaag cgattggcgt caccaccggc attttacctt ggaacttccc
    14401 gttcttcctc attgcccgta aagcggctcc ggcattagta acaggtaata ctattgtgat
    14461 taaaccgagt gaagatgcac ctaataatgc gattctcttt tcggaaatcg tgcatcaagt
    14521 cggtttacct aagggggtat ttaatgtcgt caccggctat ggcaatgaag tcgggccgga
    14581 actttcaggc aatgaaaaaa tcggtatggt ttcctttacc ggtagccagt ttgccggaca
    14641 aaaagtgatg gaagccgcca gcaagaatat cattaaagtc aatttggaat tgggcggaaa
    14701 agcaccggct atcgtattag acgatgcaga tcttgagctt gctgctaccg ctgtagtaaa
    14761 ttctcgaatc atcaattcag gacaggtttg taactgtgca gaacgcattt atgtacagag
    14821 ttcaattaaa gagcaatttg tccaaaaatt ggtagagaaa atgcaagcgg tgaaatatgg
    14881 taatccatta gaacaacaag acattgatat ggggccgatg gtaaatgaaa aaggcttgca
    14941 taaagtgcag gaaatggtga cacacgcact gcatcaagga ggtaatctgg tattaggtgg
    15001 taacgtggtt gaaggaacag gctactactt tgagccaact attatcgaca atgtagataa
    15061 ctctatggat attatgcgtc acgaaatttt tggtccggtc attccggttg cgacatttga
    15121 taccattgat gaagcgattc gcttagccaa tgattgtgaa tatggcttaa cctcttcggt
    15181 ttacacgcaa aatatcaata aagcgatgaa agtaatttcc cgcttaaaat tcggagaaac
    15241 ttatgtaaac cgtgaaaact ttgaagcaat gcaaggctac cacgccggtt ggcgtaaatc
    15301 gggtattggc ggtgctgacg gtaagcacgg cttagaggaa tacctacaaa ctcaggtggt
    15361 ttatctgcaa tttgatgata aagtatagat tcttctaaaa actcccactt atcaaaataa
    15421 gcgggagttt tcttttaggt taaccttgta tcaaaattgc a
//
LOCUS       DANLZQ010000062        15239 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.062, whole genome shotgun sequence.
ACCESSION   DANLZQ010000062 DANLZQ010000000
VERSION     DANLZQ010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15239)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15239)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15239
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.062"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            148..495
                     /locus_tag="PXE50_001614"
     CDS             148..495
                     /locus_tag="PXE50_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622523.1"
                     /translation="MFREEAIEYQSKKWKSTAVLFSRVPALVVFSISFFIFTAFILFI
                     VFGNYTRRETVVGELVMQSHPILLSAPKSGYISENYIQPHQQVKKRAIRWLKLRWIEL
                     RIAKILMLILFFR"
     gene            492..1409
                     /locus_tag="PXE50_001615"
     CDS             492..1409
                     /locus_tag="PXE50_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HDL5622524.1"
                     /translation="MKSQIQATEQAITALYKNKSETINSLEKQIKNSQKIYQDKQSYL
                     VEIEKSMNDYAELVKRYEKLLKVGHSSHDEVNIQKSRYFQQKSLFNELKQELIQLKST
                     QLSLENEIETRKTEFNNQIIRYEMQKSDLNIRLMEFESVSDIIVNASLDGKIESTSVT
                     VGQIIKENDPLAQILPQNKGNYQLVMWVPNSAISFIKQGDEVNIRYEAFPFEKFGQFK
                     GKITSISTLPASLQELSFYKNLPVNLEQGIPLYKILIELADQNVKYNDTSLYFMSGMK
                     AEATLFLEKRKLYEWIFFPMYQLRKNMEQ"
     gene            1409..2200
                     /locus_tag="PXE50_001616"
     CDS             1409..2200
                     /locus_tag="PXE50_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase C39"
                     /protein_id="HDL5622525.1"
                     /translation="MTGIKQLKFDFRRRIPVILQTETAECGLACLAMMLGYYDKNTNL
                     FELRSQYGTSSRGVTLHTLISIANDCGLITRPLSLELDEVPQLRLPCILHWDFNHFVV
                     LTHASEKQFIIHDPAFGKRKLSRAEFSNHFTGVALEVWSEVKFEKSNNENTISLYETL
                     KHISGIKGALVKIFALSMLIELIALLMPIGTQLVMDHVMQAKDQSLLLIICIGLFLFT
                     LFRTMVSMFRAWVSLKMNYLIDFQWTASFFSHLLKLPLDFFENAK"
     gene            2578..3495
                     /locus_tag="PXE50_001617"
                     /pseudo
     CDS             2578..3495
                     /locus_tag="PXE50_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014167835.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            complement(3497..4165)
                     /locus_tag="PXE50_001618"
     CDS             complement(3497..4165)
                     /locus_tag="PXE50_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HDL5622526.1"
                     /translation="MKYLYALIFSLFFSSVYAAERQLQCKVVGISDGDTLTCLVNKTP
                     LKIRLQHIDAPEQAQPYGNKAKQALAQFVFQQNITAIVSGYDRYQRLLATLYLNDKNI
                     NLALVENGMAWAYTTKREYIEAQDQAQQAKIGLWQDKFPINPSQWRKTHTSTLPQAVK
                     KPENIANQPPTIDCQIKLSCNQIGNYAQAKRYFQQCGWKELDGNNDSIPCNKLYRQEQ
                     KNRN"
     gene            complement(4209..5576)
                     /locus_tag="PXE50_001619"
     CDS             complement(4209..5576)
                     /locus_tag="PXE50_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HDL5622527.1"
                     /translation="MSIDTILNQINSFVWGPPLLILISGVGLYLTFSLKGIQLSQLGQ
                     AFRYMFKPEKGKGQSGDISAFAALSTALAATIGTGNIVGVATAIHSGGPGALFWMWLI
                     ALFGMATKYAEGLLAIKYRTKDRAGFVAGGPMYYIELGMGKKWRWLAKAFAFFGVLVA
                     LLGIGTFPQVNGITHALESTFDVPIIFSAIILTLIVTAIILGGVQRISKIATIVVPFM
                     AIGYVIAALSVILLNMEKVPQAIITIVHAAFNPQAALGGAVGFTVMQAIQLGVARGIF
                     SNESGLGSAPIAAAAAQTKEPVRQGLISMTGTFLDTIIVCTMTGLVIVISGAWAGDVK
                     GAELTTTAFTQGLNSSFGAIIVTVGLVFFAFTTILGWCYYGERCFVYLTRGRTQYIKL
                     YRLLFIALIASAPFLQLDTIWTLADIVNGLMAFPNLIALIALRKVIISETKDFFARLK
                     TGKAE"
     regulatory      complement(5695..5790)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            complement(5961..7013)
                     /locus_tag="PXE50_001620"
     CDS             complement(5961..7013)
                     /locus_tag="PXE50_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDL5622528.1"
                     /translation="MTHSTKTLVAIASIIIILAGIKLSNEIVVPFLLSLFIAIICSPM
                     IKFMTKRKVPLWLAITILLIVFILGFSFLAGIINNTLQEFTNAIPQYKIQLSSRIQVI
                     LELAHRWHIPLTLSQEEIMSKFDPSSIMNLVSKLLMGLSGALSNIFVIFLVVIFMLLE
                     MPVAKYKLALALSPDDDLSNEKEYINQVLEGVIGYLGVKTFVSLLTGGLVWILLEILG
                     VEYAILWAILTFLLNYVPNIGSILAGIPIVIQALVLNGFSIGLGTLIGIVVINMVVGN
                     ALEPKLMGKKLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMACKVALESNKATQKYA
                     VLFSDLEEVPKEQKYR"
     gene            complement(7060..7485)
                     /gene="ruvX"
                     /locus_tag="PXE50_001621"
     CDS             complement(7060..7485)
                     /gene="ruvX"
                     /locus_tag="PXE50_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HDL5622529.1"
                     /translation="MTETTTKTVIAFDFGTNSIGCAVGQSITGTAQGLTTFKAQDGIP
                     NWEEIGKLLQDWKPDMLVVGLPLNMDGTEQPLTQRARKFANRLNGRFNLPVELQDERL
                     TTVEAKAEIFSRGGYKALKKDKVDSISACLILESWFENH"
     gene            complement(7485..8045)
                     /locus_tag="PXE50_001622"
     CDS             complement(7485..8045)
                     /locus_tag="PXE50_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HDL5622530.1"
                     /translation="MLENLQGKFLIATPEMDDDYFERTVVYICEHNPQGAMGVVINTP
                     TDLSVLELITRMDFQMANQRDYKKDQMVLSGGPVNQDRGFIIHTKTANDFIHTYPITD
                     KITLTTSGDVLDSFGTLASPEKFIVCLGCSTWRGSQLEQEIAQNYWIVSDANEKTLFE
                     TGYLERWAEAYEMMGLSSIPSRAGRA"
     gene            complement(8045..8776)
                     /gene="rsmE"
                     /locus_tag="PXE50_001623"
     CDS             complement(8045..8776)
                     /gene="rsmE"
                     /locus_tag="PXE50_001623"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007524366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HDL5622531.1"
                     /translation="MRIPRIYQPQPLAGLQSCVLSEDAANHVGRVLRMKQGEQIILFD
                     GSNHVFHATLQAVEKKQIIAKIDSSELDDRESNLPIHLGQVISRGDRMEFTIQKSVEL
                     GVKTITPLWSERCGVKLNDERQDKKLQQWQKIAIAACEQCGRNEIPEIRPIMKLTDWC
                     KEQDDMLKLNLHPRAKYTIRELPNVPKAGVRLLIGSEGGLSAEEIAMTESEGFTEVLL
                     GKRVLRTETASLAAITALQVCFGDI"
     gene            complement(8836..9126)
                     /locus_tag="PXE50_001624"
     CDS             complement(8836..9126)
                     /locus_tag="PXE50_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5622532.1"
                     /translation="MPKKLHNIYYTEEALIDLENIAISVSEFTGYASSGIRILEELEN
                     SINNLAIFPTMGVKGAIINTRELYHNGYRIVCEVKENEISIITIVHCSRLYP"
     gene            complement(9107..9280)
                     /locus_tag="PXE50_001625"
     CDS             complement(9107..9280)
                     /locus_tag="PXE50_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622533.1"
                     /translation="MNNPYHNVSQEYLDYLAKKVKQGKEDIKNGRIYSPEEVRKRVIA
                     AAFRGAENAKKVA"
     gene            complement(9452..10039)
                     /locus_tag="PXE50_001626"
     CDS             complement(9452..10039)
                     /locus_tag="PXE50_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622534.1"
                     /translation="MKRSKKTLVLATTFVAALLAGCQSQSNTLTFSTPTPTAVFNTNN
                     QTAAVNVMTQDLRTSREIASYTKNGEVIRLTAVPEVAAMFQQAVQQDLNAKGFQIVQG
                     AANANVVVNIRKFFATVEQGNLRYKADAQVSVKVAVQGSKGNFSKNFNATRGYEGAFG
                     ASNDEIKKVLDQAYSDVVKAIYNDNEIANAIHQFK"
     gene            10131..10442
                     /locus_tag="PXE50_001627"
     CDS             10131..10442
                     /locus_tag="PXE50_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA/IbaG family iron-sulfur metabolism protein"
                     /protein_id="HDL5622535.1"
                     /translation="MSVEQTIIQKIKTEFQPIFFNVENESYMHSSGRGAESHFKLTLV
                     SDKFEGQRTVARHRAVYACLAEELANGVHALALHLYTQGEWEATGGLVPKSLNCLGVG
                     Q"
     gene            10534..10623
                     /locus_tag="PXE50_001628"
     tRNA            10534..10623
                     /locus_tag="PXE50_001628"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10568..10570,aa:Ser,seq:gga)
     gene            complement(10799..11173)
                     /locus_tag="PXE50_001629"
     CDS             complement(10799..11173)
                     /locus_tag="PXE50_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance protein NlpE N-terminal
                     domain-containing protein"
                     /protein_id="HDL5622536.1"
                     /translation="MKKIALIGFTTAMLGACSLLPQKSVSGTYAGELPCADCEKIQAQ
                     LTLNADKTYQYDTVYFKDKKEYTYRDKGTYSWEPNKPNVIRLEKASGNLAFQVSEQHV
                     ELCDPNGNTVKNSNNYKLGKVR"
     gene            complement(11198..11500)
                     /locus_tag="PXE50_001630"
     CDS             complement(11198..11500)
                     /locus_tag="PXE50_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF721 domain-containing protein"
                     /protein_id="HDL5622537.1"
                     /translation="MKNSAPKKINDILQNSSLSRIVEKANFINDLNQKIQKRWPESYR
                     GLYRVVNLVDNQLIVSVKNATVRQGLILQQNMLLKQIQTDLPEITQLEFRVNPSVT"
     gene            11621..11941
                     /locus_tag="PXE50_001631"
     CDS             11621..11941
                     /locus_tag="PXE50_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2547 family protein"
                     /protein_id="HDL5622538.1"
                     /translation="MSLFLKHFHRTPFWSQLFLGMVAILALPEIQVAYANESEQETVL
                     NQSFLQYAQSANDIEQQSLFIAELIHKIVEIKPQAVHFCEFFANSYRLDRQNAYPIRA
                     GPQT"
     gene            12000..14726
                     /gene="secA"
                     /locus_tag="PXE50_001632"
     CDS             12000..14726
                     /gene="secA"
                     /locus_tag="PXE50_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HDL5622539.1"
                     /translation="MISKLLTSIFGSSNDRTLKRLRKRVAQINKLEPTFEQLSDEALK
                     DKTAEFKQRLADGVSLDSLLPEAFATVREASKRVLGMRPFDVQLIGGMVLTGRNIAEM
                     RTGEGKTLTATLSCYLNALTGKGVHVVTVNDYLARRDAETNRPLFEFLGLTVGVNIPG
                     LPSDAKRAAYQADITYSTNSELGFDYLRDNLAHDKNERFQRELHYALVDEVDSILIDE
                     ARTPLIISGPAEDATQIYQAVDQIIPHLIAQDKEDSEEYTGEGDFTLDLKNKQAHLTE
                     RGMVKVEDFLTQMGLMEEGESLYHPARISLLHHVSAALRAHKLFERNVDYIVKDGEIV
                     IIDEHTGRTMAGRRWSDGLHQAIEAKERVAIQGENQTVASITYQNYFRLYEKLAGMTG
                     TADTEAFEFQQIYGLNTVVIPTNRPVIRDDRTDLMFKSEAEKFAAIITEIRDCIERKQ
                     PVLVGTASVEKSELLSAELTKAGIAHNVLNAKFHAQEAEIVAEAGAPGAVTIATNMAG
                     RGTDIVLGGNWKMEVAKLENPTQEQIDAIKAAWQERYDIVMQAGGLHIIGTERHESRR
                     IDNQLRGRSGRQGDPGSSRFYLSLDDALMRIYLNEGKLNMMRKAFTEEGEAMESKLLT
                     KVIASAQAKVEAHNFDGRKHLLQYDDVANEQRKVIYEQRNHLLETDNIASMIESIRQD
                     VFESTINQYIPPQSIEEMWNVPGLEERLRREFGLDLPISHWLETEKDLHEETLRERIL
                     NIAIAEYNAKEEIVGAEVMRNFEKGVMLQNLDELWKEHLASMDYLRKGIHLRGYAQKD
                     PKQEYKKESFAMFTNMLDTLKLNVISILSRIQVRSKEEVEEAQRQQAEMDAASTPVTQ
                     ATDSAAGSREENSAESLSEEELANLNIGRNDPCPCGSGKKYKHCHGNKARYS"
     gene            14813..15211
                     /gene="mutT"
                     /locus_tag="PXE50_001633"
     CDS             14813..15211
                     /gene="mutT"
                     /locus_tag="PXE50_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxo-dGTP diphosphatase MutT"
                     /protein_id="HDL5622540.1"
                     /translation="MSKPIIQVSAGIIRNEFGQIYLTQRLEGQDFAQSLEFPGGKVDP
                     NETPEEALKRELEEEIGIQVLSAFPYENFCFEYPTKIIEFFFYLVEEWVNEPYGREGQ
                     EGFWIAQSDLDEGAFPPANAQLIKRLKEHA"
BASE COUNT         4579 a         2840 c         3086 g         4734 t
ORIGIN      
        1 ttcgagtgta atacagaagt ttatgatata gtgttgtttt gctttttgtt tacttattct
       61 cttcttaaga agtaacatgt ttataagatt agcttttaat gtatataaaa taaatgtgct
      121 aatgtagtag tgtaaaattg gtattatatg ttcagagaag aagctattga atatcaatcg
      181 aaaaaatgga aaagcacagc tgtactattt agcagagttc cagctttggt tgtcttttcc
      241 atttctttct ttatctttac tgcctttatt ctatttattg tgtttggtaa ttatacccgc
      301 cgtgaaacgg ttgtgggtga attagtgatg caatctcatc cgattttatt atctgcccca
      361 aaatccggct atatatccga aaattatatt caaccacatc agcaggtaaa aaaaagggcg
      421 atccgctggt taaaattacg ctggatagaa ttacgcatag cgaaaatatt aatgttaatt
      481 ctattctttc gttgaaatca caaattcaag caacagaaca agcgataact gctttatata
      541 agaataaatc agaaactatt aatagccttg aaaagcagat caaaaacagt caaaaaattt
      601 atcaagataa gcagagttat ttagtggaaa ttgaaaaaag tatgaatgac tatgcggagt
      661 tggttaaacg ctatgagaaa ttattaaaag tagggcattc cagccacgat gaagtgaata
      721 ttcagaaaag ccgttatttc caacaaaaat cactgtttaa tgagctaaag caagaattaa
      781 ttcaattaaa atccacccaa cttagcttgg aaaatgaaat tgaaacccgt aaaaccgaat
      841 ttaataatca gattattcgc tatgaaatgc aaaaaagcga tttaaacatt cgtttaatgg
      901 aatttgaatc tgtttcagat attattgtta atgcctcttt agatggaaaa attgaaagta
      961 ccagcgtaac agttgggcaa attattaaag aaaatgaccc gcttgcacaa attctgccac
     1021 agaataaagg aaattatcag ctagtgatgt gggtaccgaa tagtgccatt tcatttatta
     1081 aacaaggcga tgaggtgaat attcgctatg aggcttttcc gtttgaaaaa ttcgggcagt
     1141 ttaagggcaa aattacgtca atttcaacct taccagcttc tttgcaagaa cttagttttt
     1201 ataaaaatct ccctgtaaat ttagagcaag gtattccgct ttataaaatt ctgattgagc
     1261 ttgccgatca aaacgtaaaa tataatgata cctcccttta ttttatgagt ggaatgaaag
     1321 ccgaagccac gttattttta gaaaaacgta aactgtatga gtggatattt ttccctatgt
     1381 atcaattacg caaaaatatg gagcaataat gacaggaatt aagcagttaa aatttgattt
     1441 tcggagaaga atacctgtta ttttgcaaac tgaaacagct gaatgtggct tagcctgttt
     1501 agcgatgatg ttgggctatt acgataaaaa caccaattta tttgaattgc gaagtcaata
     1561 tggtacttcc tctcgtggcg taacgctgca tactttaatt tctattgcaa atgactgtgg
     1621 tttaataact cgccctcttt ctctagagtt agatgaagta ccacaacttc gtctgccttg
     1681 tattcttcat tgggatttta atcattttgt agtattaact cacgcaagtg aaaaacagtt
     1741 tattatccac gatcctgctt tcggtaaacg taaattatcc cgtgctgaat tttccaacca
     1801 ttttaccgga gtcgctttag aagtttggtc tgaagttaaa tttgagaaaa gcaacaatga
     1861 aaataccatt agtttgtatg aaaccttaaa gcatatttct ggcataaaag gtgcattagt
     1921 gaaaattttt gccctttcaa tgctcattga actcattgcc ttattgatgc caattggaac
     1981 acagttagtg atggatcacg ttatgcaagc gaaagatcaa tcattacttt taattatctg
     2041 tattgggcta tttttattta ccctttttcg cacaatggtc agtatgttta gggcttgggt
     2101 ttccttgaaa atgaattatt taattgattt tcaatggaca gccagtttct tttctcatct
     2161 cttaaaatta ccgcttgatt tctttgaaaa cgccaagtag gtgatattca ttcccgattt
     2221 agttcattaa aaaccattca gaaaactcta acttcaagca ttattaccac gattattgat
     2281 acgattatga taatcagttt aattattatg atggtgttat atggcggttg gctcttttgg
     2341 gtagtattag ctttttcctt tatctatttt attcttcgaa tggttactta tttagtttat
     2401 cgtcaactga atgaagagca gattattaaa ggagcaaaag cccattcgca ttttatggaa
     2461 actttatatg gtattacaac gttaaaatca ttaggattgg aaaataaacg acaagaacag
     2521 tggatgtcgc tcaatgcgga tgcttttaac acatcaatta aggtaactaa atttgatatg
     2581 ctgttttccg gtattcatac ctttatttct accatcgaac agattttaat tctttggatt
     2641 ggggcgacaa tgatgattga aaatgtgatg acattaggaa tgtttgtcgc ttttaatgcc
     2701 tatcgaggct ctttctcttc acgaatgggg aatttaattg atattatttt tagcctaaaa
     2761 attctttcat tacatagaga gcggattgca gacattgctt taaatgaagt cgaagatgaa
     2821 agtaaatatc aagaactcag atttgaacat aaccaaacag atatagaagt taaagacctt
     2881 tgtttcaaat acgatccttt ttctaaaaat gtgcttgaaa atgtcaattt agtgatcaga
     2941 agtggggaaa gtgttgctat taccgcacca tcaggttatg gcaaaacaac gttattaaaa
     3001 ttaattgcag gtttattaaa accaacctca ggttctgtgt attttaacgg cattgatatt
     3061 tatcagttag gattaagtca atatcggagc caaattgctt gcgtattaca ggaagataaa
     3121 ttcttttctg gttccatttt agagaatatt gttagttttg aaagtaatta tgatcgagaa
     3181 tgggctatcg aatgtagcaa acttgcgaat attcacaatg atattatggc aatgccgatg
     3241 aattatgaaa ccttattagg agaattagga aataatttgt ctggcggaca aagataacga
     3301 ttgtttattg ctcgagcttt atataaaaag cctaaaattc ttttgatgga tgaggcgact
     3361 agccatttag atgaagaaaa tgagaagctt gtcaatcaag ctatttcacg aatgaagata
     3421 acaaggatta ttattgctca tagacaatcg actattcagt cggcggatag aattattgcc
     3481 ctgaatgaca ggtaaattaa ttcctatttt tctgttcttg ccgataaagt ttattgcacg
     3541 gaatgctgtc gttgttgccg tctagctctt tccagccgca ttgttgaaag tagcgttttg
     3601 cctgtgcgta attgccgatt tggttgcagc ttaatttaat ttggcaatca atcgttggtg
     3661 gctggtttgc aatattttcc ggttttttga ccgcttgtgg taaggttgag gtgtgtgttt
     3721 ttcgccattg gctcgggtta atcgggaatt tgtcctgcca taagccgatt ttagcttgct
     3781 gtgcttgatc ttgtgcttcg atatattccc gctttgtggt gtaagcccac gccataccgt
     3841 tttccactaa ggctaagttg atgtttttat cgtttaagta gagggtggca agtaatcgtt
     3901 ggtaacgatc atagcctgaa actatggcag taatgttttg ttgaaacacg aattgagcca
     3961 gagcttgttt ggctttgttg ccgtaaggct gcgcttgttc gggggcatca atatgttgta
     4021 gccttatttt tagtggtgtt ttattgacca aacaagtgag ggtgtcgcca tcgctaatgc
     4081 caacgacttt gcattgtagt tggcgttcgg cggcatatac cgatgagaaa aataagctaa
     4141 aaatcagggc gtaaagatat ttcattatta aaaaagagag ggctaataag ccctcattct
     4201 atcatttttt attcggcttt acctgtttta aggcgagcga agaaatcttt tgtttcacta
     4261 ataatcactt tgcgtaacgc aatcaatgcg attaaattcg ggaatgccat taagccgttc
     4321 acgatgtctg ccagcgtcca aattgtatcg agttgtaaaa atggagcaga ggcgatgagt
     4381 gcaataaaca gcaagcggta taatttaatg tattgggtgc gacctcgagt gagatagaca
     4441 aaacagcgtt caccgtagta gcaccagcct aaaatggtgg taaaggcaaa gaagactaaa
     4501 ccaactgtca caattatcgc accgaatgag ctgtttaaac cttgagtaaa agcggttgtg
     4561 gtgagttctg cgccttttac atcgcctgcc caagcccctg aaatcacaat tactaagccg
     4621 gtcattgtgc agacgataat agtgtctaag aacgtgccgg tcattgaaat taggccttga
     4681 cgtaccggct ctttggtttg ggcggcagcg gcggcgatgg gggcagagcc taatcctgat
     4741 tcattcgaga aaataccacg tgcaacccct aattgaatcg cttgcatgac ggtgaatccg
     4801 actgctccgc ctaatgccgc ttgtgggttg aaagctgcgt gtacaatagt aataattgct
     4861 tgtgggactt tttccatatt cagtagaatg acggataaag cggcgatgac atacccaata
     4921 gccataaacg gtacaacaat ggttgcaatt ttagaaatcc gctgcacgcc acctaaaata
     4981 atagcggtaa cgataagggt taaaatgatc gcactgaaga taatcggcac atcaaaggtg
     5041 ctttctaagg cgtgggtaat gccattcact tgggggaacg tgccaatacc aagcaaagcg
     5101 accaatacgc caaaaaacgc aaaggcttta gcaagccaac gccatttttt tcccattccc
     5161 agttcgatat agtacatcgg accaccagcc acaaatccgg ctctatcttt agttcgatat
     5221 ttaattgcca ataagccttc ggcatatttc gtagccatac cgaataaggc aatcagccac
     5281 atccaaaata atgctccagg cccgcccgaa tgaatagcgg ttgccacgcc gacaatattc
     5341 cccgtgccga tagtagctgc tagggcagtg gaaagggctg caaaagcgga aatatcgccc
     5401 gattgccctt tgcctttttc cggtttgaac atatagcgaa aggcttgccc tagttggctt
     5461 aattgaatac ctttgagtga aaaggttaaa tataacccta cgcctgaaat taaaatcagg
     5521 agtggcgggc cccaaacaaa actgttgatt tgattaagaa tagtgtcgat agacatttga
     5581 tgttcctcgt aaaaactgct tacaaggaaa gaaaaggaat gcaagagaca agcggtcaaa
     5641 aaacggaaat tttttgcaaa gaattagcaa aaaaacaccg cttgtatcgt ataacttttc
     5701 tcccctgtcc ttttgcctga gcgtttcaca cattgctgta ttttcgcctt cggcggcgga
     5761 ttttaatccg ctctctccaa gggttcgtcc agtaacagtc cccgcagtgt tcactgcacc
     5821 tgaaagagtt tacctcgtcg gtgaaatgtt aattcatttc tctccagcta ccttcatccg
     5881 aacaatctaa tttattttat aatgtaaaat aaaaaagatt tgccaaattc tagcaactct
     5941 tttgcttccg tcaagtgaat ttaacgatat ttttgttctt tcggtacttc ttctaaatcg
     6001 ctaaataata cggcatattt ttgggtggct ttattggatt ctaatgccac tttacacgcc
     6061 atcgtaagtg gaacagaaag taacattcct acggtgccaa gtaaccaccc ccaaaataga
     6121 agtgagagga acactacaag ggtagaaagc ccgagtttct tgcccattaa tttaggttca
     6181 agcgcattac ccacaaccat attaatcacg acaatgccga ttaaagtgcc taatcctata
     6241 gaaaagccat tgagtaccaa ggcttgaatc acaattggaa ttcccgccaa aatagagccg
     6301 atattcggga cgtagttaag caggaaggtt agaattgccc ataaaatcgc atattctacg
     6361 cctagaattt ctagtaagat ccaaactaac cctccggtga gtaggctcac aaaggtttta
     6421 actccaaggt aaccaatcac cccttcaagt acttggttga tatactcttt ttcgttgctt
     6481 aaatcatcat ctgggctaag tgcgagggct aatttatatt tggcaaccgg catttccaat
     6541 agcataaaaa tgacgactaa gaaaatcaca aaaatattcg ataatgcacc ggatagcccc
     6601 attagcagtt tgctgaccaa attcattatt gagcttgggt caaatttgct cataatctct
     6661 tcttgtgaga gggtaagtgg aatatgccat ctatgggcga gttctagaat cacctggatt
     6721 ctagatgaaa gctgaatttt gtattgcgga atagcattag taaattcttg caaggtgtta
     6781 ttaataatgc ctgctaagaa actgaatcct aagataaaaa caataagtaa aatggtaatg
     6841 gctaaccata atggcacttt acgcttagtc ataaatttga tcattggtga acaaataatg
     6901 gcaataaata gcgaaagtaa aaatggcaca acaatttcat tggataattt aatccctgcc
     6961 agaataatga taatggaggc tatcgccacg agagttttgg tggaatgtgt cataattttt
     7021 ccttttacaa gcggttaaaa atcagcaatt ttttacaaat tagtgattct caaaccaact
     7081 ttctaaaatt aaacaagcgg aaatggaatc cactttatcc ttttttaatg ctttgtaacc
     7141 accacgagaa aaaatttccg cttttgcttc aacagtagtg aggcgttcat cttgtagctc
     7201 aaccggcaga ttaaagcgtc cgtttaagcg attggcaaat tttctggcac gctgagttaa
     7261 aggctgctct gtgccgtcca tattcaaggg tagcccaaca accagcatat ctggtttcca
     7321 atcttgcaag agttttccga tctcttccca gtttggaata ccgtcttggg ctttaaatgt
     7381 agttaaacct tgagctgtgc cggtaatact ttgtccaact gcacagccga tgctatttgt
     7441 gccaaaatca aaggcaatca cggtttttgt tgtggtttct gtcattaagc tctcccagct
     7501 cttgacggta tgcttgaaag ccccatcatt tcataggctt ctgcccaacg ctctaaataa
     7561 ccggtttcaa acagcgtttt ttcattcgca tcagacacaa tccaataatt ttgagcaatt
     7621 tcttgctcaa gctggctgcc acgccaagtg gaacaaccta aacacacaat aaatttttca
     7681 ggtgaagcca gtgtgccaaa ggagtctaac acatcaccgg aggtagtgag cgtaatttta
     7741 tcggtgatcg gataagtgtg aataaaatca ttggcggttt tggtgtgaat aataaagcca
     7801 cgatcttgat ttaccggccc accgcttaac accatttggt cttttttgta atcacgctgg
     7861 ttcgccattt ggaaatccat tcgggtaatc agctctagaa ccgacagatc ggtaggagtg
     7921 ttaattacta ctcccattgc accttgcgga ttatgttcgc aaatatagac caccgtacgc
     7981 tcgaaatagt catcgtccat ttccggcgtg gcaattaaaa atttaccttg taaattctct
     8041 aacattaaat atctccaaaa caaacttgta acgcagtaat tgccgcaagt gaggcggttt
     8101 ctgtgcgtaa cactcgttta cccagtaata cttcagtaaa accttcgctc tcggtcatgg
     8161 cgatttcttc ggcagataat ccgccctcag agccaatcag taaacgaaca ccagctttcg
     8221 gcacattcgg cagttcacga atggtatatt tggctcttgg gtgcaaattc agtttcaaca
     8281 tatcgtcttg ttctttgcac cagtcggtga gtttcataat cgggcgaatt tcagggattt
     8341 catttcgtcc gcattgttca caggcggcaa tcgcaatttt ctgccattgc tgtaattttt
     8401 tatcttgccg ttcatcattg agtttcacgc cacaacgttc cgaccaaagt ggggtaatag
     8461 tttttacccc cagctccacc gatttttgaa tggtaaattc cattctatcg cctcgggaaa
     8521 tcacttgccc taaatggatc ggcaggttgg attctcggtc atctaattca cttgaatcaa
     8581 tttttgcaat aatttgcttt ttttcgaccg cttgtaacgt agcgtggaaa acgtggtttg
     8641 aaccatcaaa taaaatgatt tgctctcctt gtttcattcg tagcactcgc ccaacgtggt
     8701 tagcggcatc ttcacttaac acgcaacttt gaagaccagc taacggctgt ggttggtaaa
     8761 ttcttgggat tctcataatt atctagttat aaattaaagg cagacgattg tctgccatag
     8821 gtaagttaaa acgggttaag gataaagtct tgaacaatgc acaatagtaa taatcgaaat
     8881 ttcattctct ttaacttcac acactattct atagccgtta tgatatagtt ctctcgtatt
     8941 aataattgca ccttttacac ccattgtagg aaaaatggct aaattattaa tactattttc
     9001 caattcttct agtatcctaa ttccactact tgcataaccg gtaaattcac taactgagat
     9061 ggcaatattc tctaaatcta ttaaggcctc ttcagtataa taaatattat gcaacttttt
     9121 tggcattttc agcacctcta aaagcggcag caataactct ttttctgacc tcttcgggtg
     9181 aataaatccg accgttttta atatcttcct ttccttgctt tactttttta gcaagataat
     9241 caagatattc ttggctaaca ttatgataag gattattcat atttttcctc cctgcgatga
     9301 gtctctattg tgggggctac tgatcgttta atcaagttaa tttatcttat ttttcgagcc
     9361 acatcacaaa acgagaaaac aacaagcggt catttttcca cgttttttgc aaaaaatcga
     9421 agaaagatga ccgcttgcca gaaaaaatta attatttgaa ctggtgaatt gcattggcga
     9481 tttcattatc gttgtaaata gctttcacca catcagaata ggcttggtct aacactttct
     9541 tgatttcatc attgcttgca ccaaatgcac cttcgtaacc acgggtagcg ttgaagtttt
     9601 tgctaaagtt tcctttagaa ccttgcactg ccacttttac actcacttgt gcatcggctt
     9661 tgtagcgtaa gtttccttgt tctactgtgg caaagaattt acgaatattc actaccacat
     9721 tggcattcgc tgcaccttgt acaatttgga aaccttttgc attcaggtct tgttggacgg
     9781 cttgttggaa cattgcagca acttcaggca ctgcggttaa acgaatgacc tctccgtttt
     9841 tagtgtagct tgcgatttca cgcgaggtgc gtaaatcttg tgtcattaca ttcaccgcag
     9901 ccgtttgatt gtttgtgtta aatacagcag ttggcgttgg ggtagagaat gttaatgtgt
     9961 tggattggct ttggcagccg gctagtaatg cggcaacaaa agtagtggct aacactaacg
    10021 tttttttaga gcgtttcata gtaaatcctt ctatattgaa taaatttcga gaaaatttct
    10081 gcttagtata gtattatttc gttttgattt tcaatgaacg agagcaaaaa atgtcggtag
    10141 aacagacaat tattcaaaaa attaagacag aatttcagcc gattttcttt aatgtcgaaa
    10201 acgaaagcta tatgcacagc tcaggtagag gagcagaatc gcattttaaa ttaactttgg
    10261 tgtcagataa atttgaaggg cagagaacag ttgcacgtca tcgtgctgtc tatgcttgct
    10321 tagctgagga attagctaat ggcgttcacg cacttgcttt gcacctatat acccaaggtg
    10381 aatgggaagc gactggcgga cttgtaccta aatcgctaaa ttgcttaggt gttgggcaat
    10441 aagtggataa aaatgattta ttttattttg tgaagaaaat acttgaaaga gccgtgtaaa
    10501 attgctatat ttacgccatc tttttgttga ttcggtgaga tgtccgagtg gttgaaggag
    10561 cacgcctgga aagcgtgtat atgggaaact gtatcggggg ttcgaatccc cctctcaccg
    10621 ccattcatac tgaaagattc cttactgttt tcatagatat ttccttggtt aagttaaagt
    10681 agataatact ttttcatttt taggttatcc ccgagcaaac attgcttggg ggttttttta
    10741 tgcgatcggc gatagattac aaagaaaaag gattcctaag aatccttttt atctgctttt
    10801 aacgtacttt acctagttta tagttattgc tgttttttac cgtgttgcca tttgggtcgc
    10861 aaagttcaac gtgttgttca gacacttgga aggcaagatt gcctgatgct ttttccagac
    10921 gaatcacatt tggcttattg ggttcccaac tgtatgtgcc tttgtctcgg taagtgtatt
    10981 cttttttatc tttaaaatat accgtatcat attggtaggt tttatctgca tttaaggtta
    11041 gctgggcttg gattttctca cagtcagcac acggtaattc acctgcataa gtaccgctaa
    11101 cgcttttttg tggtagcaat gagcaagccc ctagcattgc ggtggtaaaa ccaatgagtg
    11161 cgattttttt catactattt tcctcttcaa aattaaatta tgtaacactc ggatttactc
    11221 taaattcaag ttgggttatt tcaggtaaat cggtttgtat ctgttttagt aacatatttt
    11281 gttgcaagat taaaccttgc cgtacggttg cattcttaac gctcacaata agctgattat
    11341 caactaaatt cactactcgg taaagcccac gataagattc tggccatctt ttctgaattt
    11401 tttggtttaa atcgttaatg aagtttgctt tttcgacaat acggcttaag cttgagttct
    11461 gtaaaatgtc attaatcttt ttaggtgctg aatttttcat ctgtttcttt acatttcgtc
    11521 ttattttagg cttgatttta cgatacttga cccaataatt tactcattcg gctttacttt
    11581 agcgtataat tagcccaatt ttttcattta tcttaattta atgagcttat ttttaaaaca
    11641 ctttcatcga acgccttttt ggtcgcaact ctttttggga atggttgcga tacttgcttt
    11701 acctgaaatt caggttgcgt acgccaatga aagtgaacag gaaaccgttc ttaatcaatc
    11761 ttttcttcaa tatgctcaat ccgctaatga tattgagcaa caatcgcttt ttattgcaga
    11821 gttaatccat aaaattgtgg aaattaaacc acaagcggtg catttttgcg aattttttgc
    11881 aaactcctac cgcttggata gacaaaatgc ttaccccatt cgagccgggc cacaaaccta
    11941 aatataattt aattttacca ttaattgatt aacccatttt tatatttagg aataacacaa
    12001 tgatttcaaa attactgact tctatttttg gctcaagcaa cgatcgcact ttaaaacgtt
    12061 taagaaagcg agtggcacaa attaataagc ttgaaccaac cttcgagcaa ttatctgatg
    12121 aggcgttaaa ggataaaaca gcggagttta agcaacgcct tgcagatggt gtatcgctag
    12181 atagcctatt acctgaagct tttgcgacag tgagagaagc aagcaaacga gtattaggta
    12241 tgcgaccatt tgatgtacag ctgatcggcg gtatggtgct aacggggcgt aatattgcag
    12301 aaatgcgtac tggggaaggt aaaaccctaa ctgcaacttt atcttgttat ttgaatgctt
    12361 tgaccggtaa aggtgttcat gttgttacgg tgaatgatta cctcgcccgc cgtgatgcgg
    12421 aaaccaaccg tccgttattt gagtttttag gcttaaccgt tggagtgaat attccggggt
    12481 taccttccga tgcaaaacgt gctgcatacc aagcagatat tacctattcg actaacagcg
    12541 aattaggttt tgattacttg cgtgataact tagctcacga taaaaacgaa cgtttccaac
    12601 gtgagttaca ctacgcatta gttgatgaag tagactctat tttaattgat gaagctcgta
    12661 cgccgttaat tatttcaggg cctgcggaag atgcgaccca aatttatcaa gcggtagatc
    12721 aaatcattcc gcatttgatt gctcaagata aagaagacag tgaagagtac accggtgagg
    12781 gcgattttac cttagatctg aaaaacaaac aggctcattt aaccgagcgt ggtatggtga
    12841 aagtagagga tttcttaact caaatggggt taatggaaga gggcgaaagt ttatatcacc
    12901 ctgctcgtat ttcgctgtta caccatgtga gtgcagcatt gcgtgcccat aaattatttg
    12961 aacgcaacgt agattacatt gtaaaagacg gtgaaattgt gattattgat gagcacaccg
    13021 gtcgtacaat ggctggacgt cgttggtctg acggcttaca ccaagcgatt gaagctaaag
    13081 agcgtgtggc tattcagggc gaaaaccaaa ctgttgcctc aattacttac caaaactatt
    13141 tccgtttgta cgaaaaatta gccggtatga ctggtacggc agacaccgaa gcctttgaat
    13201 tccagcaaat ttatggctta aatacggtgg tgattccaac caacagaccg gtgatccgtg
    13261 atgaccgtac agacttaatg tttaaaagcg aagcggagaa atttgcggcg attattactg
    13321 aaattagaga ctgtatcgag cgtaaacagc ctgttttggt tggcacagca tcggtggaaa
    13381 aatcagagtt attatcggca gaattaacca aagccggtat tgctcataac gtattaaatg
    13441 cgaaattcca cgctcaagag gctgaaattg tagcggaagc gggagctccg ggggcggtta
    13501 ctatcgcaac caatatggct ggtcgtggta cggatattgt gcttggcggt aactggaaaa
    13561 tggaagtagc caagcttgag aacccgacac aagaacaaat tgatgcgatt aaagctgcgt
    13621 ggcaagagcg ttatgacatc gtaatgcaag ccggtggttt acatattatt ggtacagaac
    13681 gccacgaatc ccgccgtatc gacaaccagt tgcgaggtcg ttctggtcgt caaggtgacc
    13741 cggggtcatc acgtttctat ctctctttag atgatgccct aatgagaatt tacctcaatg
    13801 aaggtaaatt aaatatgatg cgtaaagcct ttaccgaaga aggtgaagcg atggagtcta
    13861 aactgttaac caaagtgatt gcctctgcac aggcgaaagt agaagcgcat aactttgatg
    13921 ggcgtaagca tttattacaa tatgatgatg ttgccaatga acagcgtaaa gtaatttacg
    13981 aacaacgcaa tcatctatta gaaacagata atattgcctc aatgatcgaa agcattcgcc
    14041 aagatgtatt tgaaagcacg attaaccaat atattccgcc tcaatctatc gaggaaatgt
    14101 ggaatgtgcc gggcttagaa gagcgtttac gccgtgaatt tgggttggat ttaccgattt
    14161 ctcactggct tgaaactgaa aaagacttgc acgaagagac tttgcgtgaa cgtatcttaa
    14221 atattgcgat tgcagagtac aatgcgaagg aagaaatagt aggcgcagag gtaatgcgta
    14281 attttgaaaa aggtgtaatg ctacaaaact tagatgagct ttggaaagag catctagcct
    14341 caatggatta tttacgcaaa ggtattcact tgcgtggtta tgcacaaaaa gatccgaagc
    14401 aagagtataa aaaggaatct tttgcgatgt ttaccaatat gcttgatacc ttaaaattga
    14461 atgtaattag cattttaagc cgtattcaag tgcgtagcaa agaagaggtg gaagaagcgc
    14521 aacgccagca agctgaaatg gacgctgcaa gtacgccagt tacacaagct accgattctg
    14581 ctgctggtag tagagaagaa aatagcgcag agagcttaag tgaagaagag ttggcaaact
    14641 taaatattgg tcgaaatgac ccttgccctt gtggttcggg caaaaaatat aagcattgcc
    14701 atggtaacaa agcgagatat tcgtaattaa caagcggtca tattcagtca ggaatttgca
    14761 aattttctgc ttaatatgac cgcttgaatt tatagaaaga gtgaaggaaa ctatgtcaaa
    14821 accgattatt caagtctcag cagggattat tcgtaacgaa tttgggcaaa tttacttaac
    14881 ccaacgttta gaagggcaag attttgctca gtctcttgaa tttcccgggg ggaaagtcga
    14941 tcccaatgaa acccctgaag aagcactaaa acgagaatta gaagaagaaa ttggtattca
    15001 agtgttaagc gcttttccgt atgaaaattt ttgctttgaa tatccaacaa aaatcattga
    15061 atttttcttt tatttggtgg aagagtgggt aaatgaacct tacggaagag aagggcaaga
    15121 aggtttttgg atcgcacaat cggatttaga tgagggagct ttcccaccgg caaatgccca
    15181 attaattaaa cgcttaaaag aacacgcata atttgtattg agaactgtat ctaaagtaa
//
LOCUS       DANLZQ010000063        15118 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.063, whole genome shotgun sequence.
ACCESSION   DANLZQ010000063 DANLZQ010000000
VERSION     DANLZQ010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15118)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15118)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15118
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.063"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            138..557
                     /locus_tag="PXE50_001634"
     CDS             138..557
                     /locus_tag="PXE50_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005704641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS sensor domain-containing protein"
                     /protein_id="HDL5622541.1"
                     /translation="MVPSNEAVLKAVHDTLVISTTDLQGVITYANDLFCKLTGFTREE
                     LIGQPHNIVRHPAVPKEVYKDMWDTIQAGKIWTGIVPNCGKGGVVYVVDTTVQPMFDE
                     TGKITGYISVRRVINDLMTNFEAVESAKEIFDDFYGE"
     gene            628..2184
                     /locus_tag="PXE50_001635"
     CDS             628..2184
                     /locus_tag="PXE50_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite reductase flavoprotein subunit alpha"
                     /protein_id="HDL5622542.1"
                     /translation="MSLIPHIHIAYGSESGNAEKLAQQLAIQPFLLPYSPTLSTLNET
                     DLSQLSAESLLLIVTSSFGDGEPPENADEFAEKLENLTACNLQYAIFGLGDITYDKFC
                     GYSKQLDSLLQQKQAKAVIARVDADLNYQEIFKQWLPLVEQALHSTNKETIQHSLSVQ
                     AYGEEMAYQAEVLEIKHLANSSPAVYHIRLSLKESGIFYQAGDLIYVKVQQPDRLLNE
                     YAEWFNDQNAVALLRHKELRLLSKNVLRDIQKICGSNELKDLTKISNKKALEQYVYGR
                     DLLDVLRDFDPNKSVTLADLEPILSNLAARAYSISSCGKTHPDYVDLCIRHVSYHLNG
                     RDYQGTASGYLSELQAGDFVSIFANANPNFRLPETLTAPVVMIGSGTGIAPHIAFLQA
                     LEQQYQGVESYLFFGERYRDKDFLYQTELENYLAKGTLTQLFTAFSRDQAEKFYVQDA
                     LSQQAELVWHLIQQGAYFYICGSKAMSKAIDAELIKIADQIGGDPYIDDFNNIIAKLV
                     AEGRLMRDVY"
     gene            complement(2242..2499)
                     /gene="rpsQ"
                     /locus_tag="PXE50_001636"
     CDS             complement(2242..2499)
                     /gene="rpsQ"
                     /locus_tag="PXE50_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005759643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HDL5622543.1"
                     /translation="MTDKIRTVQGKVVSDKMDKSFVVAIERTVKHPLYGKFIRRTTKL
                     HVHDENNEAKLGDVVEIKECRPISKTKSWTLVRVVEKAVVA"
     gene            complement(2499..2690)
                     /gene="rpmC"
                     /locus_tag="PXE50_001637"
     CDS             complement(2499..2690)
                     /gene="rpmC"
                     /locus_tag="PXE50_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HDL5622544.1"
                     /translation="MKAQELRNKSVEELNGELVNLLGEQFKLRMQAATGQLQQTHQLK
                     QVRRSIAQVKTVLTEKAGE"
     gene            complement(2690..3100)
                     /gene="rplP"
                     /locus_tag="PXE50_001638"
     CDS             complement(2690..3100)
                     /gene="rplP"
                     /locus_tag="PXE50_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HDL5622545.1"
                     /translation="MLQPKRTKFRKVHKGRNRGIAGGTEVSFGSFGLKAIGRGRLTAR
                     QIEAARRAMSRAVKRQGKIWIRVFPDKPITEKPLEVRMGKGKGNVEYWVALIQPGKVL
                     YEMDGVSEEVARNAFALAAAKLPFKTTFVTKTVM"
     gene            complement(3114..3821)
                     /gene="rpsC"
                     /locus_tag="PXE50_001639"
     CDS             complement(3114..3821)
                     /gene="rpsC"
                     /locus_tag="PXE50_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001742302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HDL5622546.1"
                     /translation="MGQKVHPNGIRLGIVKPWNSTWFANTQDFADNLDGDFKVRKFLN
                     KELANASVSRITIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAKIAGVPAQIN
                     IAEVKKPELDAKLVADSIASQLERRVMFRRAMKKAVQNAMKLGAKGIKVEVSGRLGGA
                     EIARSEWYREGRVPLHTLRADIDYSTAEAHTTYGVIGVKVWIFKGEILGGMAAVIESE
                     KEPAAQPKKAPRGKGRK"
     gene            complement(3841..4173)
                     /gene="rplV"
                     /locus_tag="PXE50_001640"
     CDS             complement(3841..4173)
                     /gene="rplV"
                     /locus_tag="PXE50_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000447526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HDL5622547.1"
                     /translation="METIAKHRYARTSAQKARLVADLIRGKKVSVALEILTFTNKKAA
                     TLVKKVLESAIANAEHNDGADVDDLKVAKIFVDEGPSMKRVMPRAKGRADRILKRTSH
                     ITVVVSDR"
     gene            complement(4184..4459)
                     /gene="rpsS"
                     /locus_tag="PXE50_001641"
     CDS             complement(4184..4459)
                     /gene="rpsS"
                     /locus_tag="PXE50_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HDL5622548.1"
                     /translation="MPRSLKKGPFLDLHLLKKVEKAVESGDKKPIKTWSRRSMIIPSM
                     IGLTIAVHNGRQHVPVYVSDEMIGHKLGEFAPTRTYRGHAADKKAKK"
     gene            complement(4490..5311)
                     /gene="rplB"
                     /locus_tag="PXE50_001642"
     CDS             complement(4490..5311)
                     /gene="rplB"
                     /locus_tag="PXE50_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001738551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HDL5622549.1"
                     /translation="MAIVKCKPTSAGRRHVVKVVNAELHKGKPFAALLDTKSKTGGRN
                     NLGRITTRHIGGGHKQHYRLIDFKRNKLDIPGVVERLEYDPNRSANIALVLYKDGERR
                     YILAPKGLTAGDQIQAGASAPIKVGNALPMRNIPVGTTVHNVELKPGKGGQIARSAGA
                     YVQIIAREGNYVTLRLRSGEMRKVLAECTATIGEVGNSEHMLRVLGKAGANRWRGIRP
                     TVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVQTKGKKTRHNKRTDKFIVRRRGK"
     gene            complement(5330..5635)
                     /gene="rplW"
                     /locus_tag="PXE50_001643"
     CDS             complement(5330..5635)
                     /gene="rplW"
                     /locus_tag="PXE50_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005818317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HDL5622550.1"
                     /translation="MIQQERLLNVLKAPHISEKATNNAEKGNTIVFKVALDANKVEIA
                     NAVEELFEVKVDSVRTVVVKGKTKRRGAKVGRRSDWKKAYVTLQEGQSLDFVEGAAE"
     gene            complement(5632..6234)
                     /gene="rplD"
                     /locus_tag="PXE50_001644"
     CDS             complement(5632..6234)
                     /gene="rplD"
                     /locus_tag="PXE50_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010304939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HDL5622551.1"
                     /translation="MELQVVGANALTVSETTFGREFNEALIHQVVVAYAAGARQGSRA
                     QKTRAEVSGSGKKPWRQKGTGRARSGDIKSPIWRSGSVTFAAKPQDHSQKVNKRMYRG
                     AIKSILSELVRQDRLVVVEKFEIDAPKTKVLAQKLKDMALNDALIITANVDENLFLAA
                     RNLYKVDVRDVQGIDPVSLIAFDKVVVTVDAVKQIEEMLA"
     gene            complement(6250..6879)
                     /gene="rplC"
                     /locus_tag="PXE50_001645"
     CDS             complement(6250..6879)
                     /gene="rplC"
                     /locus_tag="PXE50_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000579825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HDL5622552.1"
                     /translation="MIGLIGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDG
                     YSAIQVTTGSKKASRVTKPEAGHFVKAGVEAGRGLWEFRTTEGEEFTLGQEINVDIFT
                     DVKKVDVTGTSKGKGFQGGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKK
                     MAGHLGAERVTVQSLEVVRVDVERKLLLVKGAVPGATNGDVIVKPAVKA"
     gene            complement(6905..7216)
                     /gene="rpsJ"
                     /locus_tag="PXE50_001646"
     CDS             complement(6905..7216)
                     /gene="rpsJ"
                     /locus_tag="PXE50_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014268624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HDL5622553.1"
                     /translation="MQNQRIRIRLKAFDHRLIDQSTAEIVETAKRTGAQVRGPIPLPT
                     RKERFTVLISPHVNKDARDQYEIRTHKRLVDIVEPTEKTVDALMRLDLAAGVDVQISL
                     G"
     gene            7660..8160
                     /locus_tag="PXE50_001647"
     CDS             7660..8160
                     /locus_tag="PXE50_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family protein"
                     /protein_id="HDL5622554.1"
                     /translation="MQTINEIKEEIYPIFEPIIGTIRLKTYFSYYAVFKDGLMIALYQ
                     NGATYLRIAKKDIEYIRQYPKTCILCDEKIGIQSRKFHYIPQVLIDDTPKFSSLLFGI
                     IEELRTEKYKISQKRATQIRNLPNMNLKLERMLKKIGIHSIHDFTQEGYMSTFIKLIL
                     HRRLTV"
     gene            8448..9842
                     /gene="fumC"
                     /locus_tag="PXE50_001648"
     CDS             8448..9842
                     /gene="fumC"
                     /locus_tag="PXE50_001648"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005567406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HDL5622555.1"
                     /translation="MEFRIEKDTMGEVQVPADKYWAAQTERSRNNFKIGPEASMPAEI
                     IEAFGYLKKAAAYANHDLGVLAVEKRDLIAKACDEILANKLDDQFPLVIWQTGSGTQS
                     NMNVNEVVANRAHVLNGGKLGEKSIIHPNDDVNKSQSSNDTYPTAMHIAAYKKVVEHT
                     LPCVKRLQKTLAEKAEAFKDVVKIGRTHLMDATPLTLGQEFSAYAAQLAFGIKALENT
                     LPHLRELALGGTAVGTGLNTPQGYDVKVAEYIAKFTGLPFVTAQNKFEALATHDAIVE
                     THGALKQLAVSLYKIANDVRLLASGPRSGIGEILIPENEPGSSIMPGKVNPTQCEAMT
                     MVCAQVLGNDVTISFAGTQGHFQLNVYKPVMAYNFLQSAQLLGDACVSFDEHCAVGIE
                     PNYPRIKQQLDQSLMLVTALNTHIGYENAAKIAKTAHKNGTTLKEEAINLGLVTAEQF
                     DEWVRPEDMVGSLK"
     gene            9969..10079
                     /locus_tag="PXE50_001649"
     CDS             9969..10079
                     /locus_tag="PXE50_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005696979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDL5622556.1"
                     /translation="MKKLILIALVTTLGLSACGVKGPLYFPEQAPKHEQK"
     gene            10184..11434
                     /gene="lysA"
                     /locus_tag="PXE50_001650"
     CDS             10184..11434
                     /gene="lysA"
                     /locus_tag="PXE50_001650"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HDL5622557.1"
                     /translation="MNHFEYKNNQLFAEEVAIADIIEQYGTPAYVYSRSTLERHWHAF
                     NNAFGSHPHLVCFAVKSNSNIALLNVMARLGSGFDIVSQGELERVLAAGGEASKVVFS
                     GVAKSHSEIKRALEVGIRCFNIESVSELHRINQVAGELGKIAPISLRVNPDVDAHTHP
                     YISTGLKENKFGVSVTQAREVYRLAKTLPNVKITGMDCHIGSQLTELQPFLDATDRLI
                     ILMEQLREDGIELHHLDLGGGLGVPYNGEEPPHPTEYAKALLEKLKGYENLEIIIEPG
                     RAITANAGILVTKVEYLKQNEDRNFAIVDTGMNDMIRPALYEAYMQITEVDKTLNRDK
                     AVYDVVGPICETSDFLGKQRELAISEGDLIAIRSAGAYGAAMSSTYNSRPQAAEIMVD
                     GNQAHLIKARATFADLWRLEKLLP"
     gene            11448..12077
                     /locus_tag="PXE50_001651"
     CDS             11448..12077
                     /locus_tag="PXE50_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HDL5622558.1"
                     /translation="MKLYGLTGACSFVPHVALEWVKLRANQDYAFQAVSREFIKSAEY
                     LALNPRGNVPLLVDGDLALTQNQAIVHYLDELYPEAKLFGSKTARDKAKAARWLAFFN
                     SDVHKSFVPLFRLPSYAEGNETLTKTIRQQSAEQILEQLAFANAHLENHIFFGEEISV
                     ADAYLYIMLNWCRLLGLDFSHLSQLSAFMQRVEADQGVDNVREQEGLKG"
     gene            12148..13593
                     /gene="tldD"
                     /locus_tag="PXE50_001652"
     CDS             12148..13593
                     /gene="tldD"
                     /locus_tag="PXE50_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HDL5622559.1"
                     /translation="MLNQVSNSLLAPSGLELSHLTQVLDHFSGRHIDYADLYFQLSQD
                     ESWSLEDSIIKEGGFYIDRGFGVRAISGEKTGFAYADQITLKQLEQCAAAARSISPTS
                     GQLSVKNFKKTTACSRYPAINPLETISREQKVELLHLVDKTARMADPRVIQVNANLSA
                     VYEEMLVAATDGTLAADIRPLVRLSVSVLVEQNGKRERGSAGAGGRFGLDWFLAPSET
                     GFSRAESLTKEAVRQALVNLTAIPAPAGTMPIVLGAGWPGILLHEAVGHGLEGDFNRK
                     ESSLFSGKIGQMVTSELCTIVDDGTVPNMRGSITVDDEGVPSQRNVLIENGILKGYMQ
                     DKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYLTEGNHEFEEMIESVEYGLYAPHFS
                     GGQVDITSGKFVFSTAEAYLIEKGKITKPVTGATLIGSGIEAMQQVSMVGKKMELDPG
                     IGTCGKEGQSVPVGVGQPTVKLDKITVGGRG"
     gene            13657..14538
                     /gene="prmA"
                     /locus_tag="PXE50_001653"
     CDS             13657..14538
                     /gene="prmA"
                     /locus_tag="PXE50_001653"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HDL5622560.1"
                     /translation="MAWVQIRLNSTDKQAEEISDFLTEIGAVSVTFMDSQDTPIFEPL
                     PGETRLWGNTDVVGLFDAETDMNLIVEALKTSKLVDENFAHKIEQIEDKDWEREWMDN
                     FHPMQFGKRLWICPSWREVPDPNAVNVMLDPGLAFGTGTHPTTSLCLQWLDSLDLEGK
                     TVIDFGCGSGILAIAALKLGAKQAIGIDIDPQAILASQNNAEANGVAEKLQLFLAKDQ
                     PRELQADVVVANILAGPLKELAPNIITLVKPNGNLGLSGILATQAESVCEAYSEAFTL
                     DPVVEKEEWCRITGRKI"
     gene            complement(14713..14788)
                     /locus_tag="PXE50_001654"
     tRNA            complement(14713..14788)
                     /locus_tag="PXE50_001654"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14753..14755),aa:Trp,seq:cca)
     gene            complement(14854..14930)
                     /locus_tag="PXE50_001655"
     tRNA            complement(14854..14930)
                     /locus_tag="PXE50_001655"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14894..14896),aa:Asp,seq:gtc)
     gene            complement(14941..15056)
                     /gene="rrf"
                     /locus_tag="PXE50_001656"
     rRNA            complement(14941..15056)
                     /gene="rrf"
                     /locus_tag="PXE50_001656"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
BASE COUNT         4476 a         3272 c         3035 g         4335 t
ORIGIN      
        1 tatttttaca aaaaaaccat atttatgatt tacattaata tttccatcta ttatcctaaa
       61 tatgttgtca gtatttatac tgataaacac ataacaaaat tcatttatat taatggagat
      121 tcaacacggc tgaacaaatt gttccttcaa atgaagctgt tttaaaagca gtccacgata
      181 ctttagttat ttcaacaact gatttacaag gtgttattac ttacgctaac gaccttttct
      241 gcaaattaac cggttttacc cgtgaagaat taattggaca accgcataat atcgtacgcc
      301 acccagctgt accaaaagaa gtttataaag atatgtggga tacaatccaa gccggtaaaa
      361 tctggacagg tatcgtacca aactgcggta aaggcggtgt agtttatgtg gttgatacca
      421 ccgttcaacc aatgtttgat gaaacaggca aaattacagg ctatatcagc gttcgccgtg
      481 taattaatga tttaatgacc aactttgaag cagtagaatc agcaaaagaa atctttgatg
      541 acttctacgg tgaataatta aaaaacaatg attgcgtgta aaagatgatc tcttttacac
      601 gcaatttttt attttcgagg agtttgtatg tctctcattc cccatatcca cattgcttat
      661 ggttcggagt ctggtaacgc agaaaagctt gcccaacaat tagctatcca acccttttta
      721 cttccctact cacccacact ttctacatta aacgaaaccg atttaagcca attatctgcc
      781 gagagtttat tgcttattgt aaccagctcc tttggtgatg gcgaaccacc tgaaaacgcc
      841 gatgaatttg cagaaaaatt ggaaaatttg accgcttgta atctgcaata tgcgatattc
      901 gggctaggtg atattactta tgataaattc tgtggctata gcaaacaact agattcatta
      961 ttacaacaaa aacaagctaa agctgtgatt gcaagggttg atgccgattt aaactatcaa
     1021 gaaattttta aacaatggct acccctagtg gagcaggcat tacattcaac aaacaaagaa
     1081 acgatccaac attccctttc tgttcaagct tacggcgagg aaatggcata ccaagcagaa
     1141 gtgttggaaa ttaagcattt ggcaaactca agccctgcgg tgtatcacat tcgtttatca
     1201 ttaaaagaga gcggtatttt ctatcaagca ggggatttaa tttatgtcaa agtgcagcaa
     1261 ccagacagac tattaaatga atatgcagaa tggtttaacg atcaaaatgc agttgcatta
     1321 ctacgccata aagaactccg actactaagt aaaaatgtac tgcgtgatat tcaaaaaatt
     1381 tgcggcagta atgaactcaa agatttaact aaaatttcca ataaaaaagc attggaacaa
     1441 tatgtctatg ggcgggattt attagacgta ttacgcgatt ttgacccaaa caaaagcgtg
     1501 acattagccg atttagagcc aattttatct aacttagccg cacgagccta ttcaattagc
     1561 tcttgcggta aaactcaccc tgattatgtt gatttatgta tccgccacgt ttcgtatcat
     1621 ttaaacggta gagattatca agggactgca agtgggtatt tatccgaatt acaagcgggc
     1681 gattttgtct cgatttttgc aaatgccaat ccgaatttcc gtttacccga aacattaacc
     1741 gctccggtgg tgatgattgg ctcaggtact ggcattgctc cgcatatcgc atttttacaa
     1801 gcgttagagc agcaatatca gggggttgaa agctatttat tcttcggcga gcgttatcgt
     1861 gataaagatt ttctgtatca aacggaactg gaaaattact tagcaaaagg caccttaact
     1921 cagctgttta ctgctttttc acgtgatcag gcagagaagt tttatgtgca agatgcccta
     1981 tcgcaacaag cagagttagt ttggcattta attcagcaag gggcttattt ctatatttgt
     2041 ggtagcaaag caatgagtaa agcaatagat gcggaactca tcaaaattgc agatcaaatt
     2101 ggaggcgatc cttatattga tgatttcaat aatattattg caaaattggt cgcagaaggc
     2161 cgattaatgc gagatgtata ttagcaaatg aaaaaaacta aaaacccagc aaaagctggg
     2221 tttttattta atcatagttc attaagcaac aactgctttc tcaactacac gaactaaagt
     2281 ccaagattta gtttttgaaa taggacgaca ttccttaatt tcaacaacat cacctaattt
     2341 agcttcattg ttttcatcgt gtacatgaag tttagtagta cgacggataa acttaccgta
     2401 taacggatgt ttaactgtac gttcgatagc aacaacaaat gatttatcca ttttgtcgct
     2461 aaccacttta ccttgtactg tacgaatttt atcagtcatt attcacccgc cttttcggtt
     2521 aatacagttt taacttgtgc aatactacga cgcacttgtt ttaactggtg ggtttgttga
     2581 agctgaccgg tggctgcttg catacgcaat ttgaattgtt cacctaaaag gttcactaac
     2641 tcaccattca gctcttcaac acttttatta cgtagttctt gagctttcat tacatcaccg
     2701 tcttagttac aaatgtggtt ttgaacggaa gtttagctgc cgctaatgca aacgcattgc
     2761 gtgcaacttc ttcagaaaca ccatccattt catagagaac tttacccggt tggattaagg
     2821 ctacccagta ctcaacgtta cctttacctt tacccatacg gacttctaat ggtttttcag
     2881 taattggttt gtctgggaac acacggatcc agattttacc ttgacgttta accgcacggc
     2941 tcatcgcacg acgagcagct tcaatttgac gagctgttaa acgaccacgg ccaatagctt
     3001 ttaaaccaaa tgaaccgaag ctcacttctg tgccacccgc gataccacgg ttacggcctt
     3061 tgtgtacttt acggaatttt gtgcgttttg gttgtaacat tcagtgattc tccttattta
     3121 cgacctttgc cacgtggcgc ctttttaggc tgtgccgctg gttctttttc agattcaatc
     3181 actgcagcca ttccaccaag aatttcacct ttgaagatcc acacttttac gccgattacg
     3241 ccgtaagtag tgtgagcttc agcagtacta taatcgatgt ctgcacgaag cgtatgtaga
     3301 ggtacacgac cttcacgata ccattctgag cgagcaattt ctgcaccacc taaacgaccg
     3361 ctaacttcaa ctttgatacc tttagcacct aatttcatcg cgttttgaac tgcttttttc
     3421 attgcacgac ggaacatcac acgacgttca agttgagaag cgatgctatc tgcgactaat
     3481 ttcgcatcta gctctggttt tttcacttca gcgatgttga tttgagctgg aacgccagcg
     3541 attttcgcaa ctgcgttgcg taatttttca acatcttcac cttttttacc gataacgata
     3601 cccgggcgag ctgtgtgaat agttacacga atgctttttg caggacgctc aatagtgatg
     3661 cgtgatacag aagcgttcgc taactctttg tttaaaaatt tacgtacttt gaagtcgccg
     3721 tctaagttat cagcgaaatc ttgtgtattc gcgaaccaag tagagttcca aggtttaaca
     3781 atacctaggc gaataccatt aggatgtact ttctgaccca tttgttattc tcctacttaa
     3841 ttaacgatct gacacaacca cagtgatgtg gcttgtacgt tttaaaatac gatctgcacg
     3901 accttttgca cgtggcatta cacgtttcat gcttggacct tcatcaacga agattttagc
     3961 aactttaaga tcatcgacat ctgcaccgtc attatgctct gcgtttgcaa tagctgactc
     4021 taatactttc ttaacaagcg tcgctgcttt tttgttagtg aaagttaaga tttctaatgc
     4081 tacagaaact tttttaccgc gaattaaatc agcaactaag cgagcttttt gggcagaagt
     4141 acgagcgtaa cgatgtttag caatagtttc catcttttac ctcttatttc ttagctttct
     4201 tatctgcggc gtgaccgcgg tatgtacgag tcggtgcaaa ttcacctaat ttatgaccga
     4261 tcatttcgtc ggaaacataa acaggaacgt gctgacgacc attatggact gcgatggtca
     4321 aaccaatcat tgatggaatg atcattgaac gacgggacca agttttaatt ggttttttat
     4381 ccccgctttc caccgccttc tctaccttct tcaacaagtg taggtcaagg aaaggacctt
     4441 tcttgaggga acgtggcatt ggtgtttacc ttttagttaa tgaattaaat tatttgccac
     4501 gacgacgtac gatgaattta tcagtacgtt tgttgtgacg agttttctta cctttggttt
     4561 gaacgcccca aggtgtaaca ggatgtttac cgaagttacg accttcacca ccaccgtgtg
     4621 ggtgatctac cgggttcatt gcagtaccac gaacagttgg acgaatacct ctccaacggt
     4681 ttgcacctgc tttaccaaga acgcgaagca tatgctctga gttacctact tcaccaatgg
     4741 ttgcagtaca ctcagctaat actttacgca tttcgcctga acgaagacgt aaagttacat
     4801 agttaccttc acgggcaatg atttgaacgt aagcaccagc agaacgtgca atttgaccac
     4861 ctttaccagg ttttaattca acgttgtgta cagttgtacc tactgggatg ttacgcattg
     4921 gtaatgcgtt acctacttta atcggagctg aagcacccgc ttgaatttga tcaccagcag
     4981 ttaaaccttt tggtgctaaa atatagcgac gttcaccatc tttataaagt actaatgcga
     5041 tattcgcaga acgatttgga tcgtattcta aacgctcaac aacacccgga atgtctaatt
     5101 tattacgttt aaaatcaatt aaacggtagt gttgtttgtg accgccacca atgtgacgag
     5161 ttgtgatacg acctaagttg ttacgaccac cagttttaga tttagtatct aaaagtgctg
     5221 caaaaggttt acctttgtga agctcagcgt ttacaacttt aacaacgtga cgacgaccag
     5281 cggaggtcgg cttacattta acgatagcca tttattttat ctcctctgat tactctgccg
     5341 caccttcaac gaagtcaagc gattgacctt cttgaagagt tacataagct tttttccagt
     5401 cactacgacg accaacttta gcaccacggc gtttagtttt acctttaact actacggtac
     5461 gaacagaatc aacttttact tcaaaaagtt cttcaactgc atttgcaatc tcaactttgt
     5521 ttgcatctaa tgcaactttg aatacgattg tattgccttt ttctgcgttg tttgtcgctt
     5581 tttcagagat atgtggtgct ttaagcacgt ttagcaaacg ttcttgttga atcatgctaa
     5641 catctcctca atttgtttta ctgcatctac ggttacaacc actttatcga aagcaattaa
     5701 gctaactggg tcaatacctt gcacatcacg cacatcaact ttatataagt tgcgtgctgc
     5761 taagaataaa ttctcatcta cgtttgcagt aatgataaga gcgtcattta acgccatatc
     5821 ttttaatttt tgtgctaata ctttagtttt tggtgcatcg atttcgaatt tctcaacaac
     5881 cactaaacgg tcttgacgaa ctaattcaga aagaatgctt ttgattgcac cacggtacat
     5941 tcttttgttc actttttggc tgtgatcttg tggtttcgca gcaaaagtta cactacccga
     6001 acgccaaatt ggtgatttaa tatcaccaga acgtgcacgg cctgtacctt tttgacgcca
     6061 aggtttttta cctgaaccag acacttcagc acgagttttt tgagcacgag atccttgacg
     6121 agcacctgct gcataagcaa caactacttg gtggattaat gcttcattga actcacgtcc
     6181 gaaggtagtt tcagaaacag ttagtgcgtt tgcacctaca acttgtaatt ccatctctat
     6241 ctcctagact tatgctttaa ctgccggttt tacgataaca tcaccattag ttgcaccagg
     6301 aacggcacct ttaactaata ataatttacg ctcaacatct acacgaacaa cttcaagtga
     6361 ttgaacggtt acacgctctg cacctaagtg tcctgccatt tttttacctt taaacacacg
     6421 acctggagtt tggttttgac caatagaacc aagtacacga tgtgataaag agttaccgtg
     6481 agttgcatct tgagtacgga agttccaacg tttaacacca ccttggaagc ctttaccttt
     6541 tgatgtacca gtaacatcga cttttttaac atcagtaaag atgtcaacat tgatttcttg
     6601 acctaaagtg aattcttcac cttcagtagt acgaaattcc cataaaccgc gtccagcttc
     6661 aacacctgct ttcacgaaat gacctgcttc tggtttagtt acacggctag cttttttaga
     6721 gccagtagta acttgaattg cagagtagcc atcgttttca agggttttaa cttgagtaac
     6781 acggttggct tcgatttcga taacggtaac tggaatagac acgccgtctt cagtgaaaac
     6841 gcgggtcata ccaactttac gaccgattaa accaatcatt gtaataacct cttaaaattc
     6901 ccaattaacc tagactaatc tgaacgtcaa cgccagcagc tagatctaaa cgcattaatg
     6961 catcaacagt tttttctgtt ggttcaacaa tatcaactaa acgtttgtga gtacggattt
     7021 catattggtc acgtgcatct ttattcacgt gtggagaaat caatacagtg aaacgttctt
     7081 tacgagttgg taaaggaatt ggaccacgaa cttgtgcacc agtacgttta gctgtttcta
     7141 cgatctccgc agtagattga tcaattaaac gatgatcaaa tgcttttaag cggatacgga
     7201 ttctttggtt ctgcattaga ccagagctcc aattaaaaaa tttagctaat aaaaaaacca
     7261 aactaccact taacaaatta gttaagggag ctcagttaaa cctatatagt tccaaaatta
     7321 ggaacattgt atacactaca atatctgtag tgccatttga taaatgatta catcaaatgt
     7381 ctttagatac ctaaagcttt gctatcatac tcgtttcatt tcccttatgc aagtaatttt
     7441 tgttttttat attgacaata atttgattcg ataaaacttc taaagataca caatatttcc
     7501 aatacttcat ttgaagtggc tcaaataaat tgtatttatg cattttttta ttcaaacttt
     7561 tcgagccact tcacaaatct aaaaaatcct agttgaaatt taatccataa gagtatttat
     7621 tattaaataa gtttcatgac cttacatcgg agtacatata tgcaaacaat caatgaaatt
     7681 aaagaagaaa tctaccctat atttgagcct atcattggaa caattcggct aaaaacctac
     7741 ttttcctact acgcagtttt taaggatgga ttgatgattg cattgtatca aaatggagca
     7801 acttatttac gtattgcgaa aaaagatatt gaatacattc gtcagtatcc taaaacctgt
     7861 atcttatgcg atgaaaaaat tggtatacaa agtagaaaat ttcattatat tccgcaagtt
     7921 ctcatagatg atacaccaaa atttagctcg ctactctttg gaattataga ggaactccga
     7981 acggagaagt acaaaataag ccaaaagcga gctacacaaa tccgaaacct accaaatatg
     8041 aatttaaagt tagaaagaat gttgaaaaaa atagggattc attccattca tgattttact
     8101 caagaagggt atatgtcaac ttttatcaaa ctgattctcc accgaagact tactgtttaa
     8161 gctaaacgga gctttaaatc accaatatat ttacaccttc acagatcaac aaaaaaggga
     8221 actaatgcaa gaagcaaatc aagcgctata taattcaggc ctaagaaaaa gatttaacgc
     8281 cctgtagtta aataatgtga tccaaatcat aaaatataaa aaaaccaata aggaattgca
     8341 attcgcagtt cctttctttt tcttttatat gctagtatca ccttatacct ctaaattatt
     8401 agtgcctact gattttcaat taatccaaca atttaggaga gcgcatcatg gaattccgta
     8461 tcgaaaaaga cacaatgggc gaagtgcaag ttcctgccga taaatactgg gcggcgcaaa
     8521 ccgagcgttc acgcaataac ttcaaaatcg ggccggaggc atcaatgccg gcggaaatta
     8581 tcgaggcgtt tggctatctg aaaaaagcgg ctgcctatgc taatcacgat ttaggcgtac
     8641 tagcggtcga aaaacgggat ttaattgcaa aagcctgtga tgaaattttg gcgaacaaac
     8701 tcgatgatca attcccgctg gtgatttggc aaaccggctc gggtacgcag tcaaatatga
     8761 acgtgaatga agtcgtggca aaccgtgcac acgtgttaaa cggcggcaag ctgggtgaaa
     8821 aatcgattat tcacccgaat gatgatgtga ataaatccca atcttctaac gacacctacc
     8881 caactgcaat gcacatcgct gcttacaaaa aagtggtgga acacacccta ccttgtgtga
     8941 aacgtctgca aaaaacctta gcggaaaaag ccgaagcctt taaagatgtg gtcaaaatag
     9001 ggcgtactca cttaatggat gctaccccgc tcacgctcgg tcaagagttc tctgcctatg
     9061 cagcacagtt agcattcggc atcaaagcat tggaaaacac cctgccacac ctgcgtgagc
     9121 tggcactcgg cggcacagca gtcggcaccg gcttgaatac cccgcaaggt tacgatgtga
     9181 aagtggcgga atacattgcg aaattcaccg gtttaccgtt cgttaccgcc caaaacaaat
     9241 ttgaggcatt agcgactcac gatgcgattg tcgaaaccca cggtgcatta aaacagcttg
     9301 cggtgtcgct ctacaaaatt gccaacgatg tccgtttatt agcctccggt cctcgttcag
     9361 gcattggcga aattctgatt ccggaaaacg agccgggttc atcaattatg ccgggtaaag
     9421 taaacccaac ccaatgcgaa gcaatgacaa tggtatgtgc ccaagtatta ggcaacgatg
     9481 taaccatctc ttttgccggc acgcaagggc atttccaact gaatgtctat aaaccggtga
     9541 tggcgtacaa cttcctgcaa tcggctcaac tgctaggcga tgcgtgcgtg tcgtttgacg
     9601 aacactgtgc agtcggcatt gaaccgaact accctcgcat taaacaacag ctcgaccaat
     9661 cgctgatgtt agtgaccgca ttaaatactc acattggtta tgaaaatgca gcgaaaatcg
     9721 ccaaaactgc ccacaaaaac ggcacaacac tgaaagaaga ggcgattaac ttaggcttag
     9781 tcacggcaga acagttcgat gaatgggttc gtccggaaga tatggttggc agcttgaaat
     9841 aagcccaacc cttctcttgt aatctgattt acacctcaat ctaccggtaa gattgaggtg
     9901 taatttttta tagcgagggt actgattttg ttttagaatg aagcatcatt ttttaagcgg
     9961 aaaaacctat gaaaaaactc attttaatcg cattagttac tactttaggc ttaagtgctt
    10021 gtggggtcaa aggcccactc tacttccctg agcaagcccc taaacatgaa caaaaataag
    10081 cattgcaagc ggtctgtttt ggctaaaatt ttgcaaattt ttgtgaaaaa atgaccgctt
    10141 gttgcctctt ttctttcaaa atcccaaaca caacggactt tcaatgaacc attttgaata
    10201 taaaaacaac caactttttg ctgaagaagt cgctattgcc gatattatcg agcaatacgg
    10261 cacgccagct tatgtttact ccagatctac ccttgaacgc cactggcacg cattcaataa
    10321 tgcgtttggc tcgcacccac atttagtttg ctttgcagtc aaatccaact ctaacattgc
    10381 cttgttaaat gtaatggctc gtctcggttc aggctttgat attgtctctc aaggcgagtt
    10441 ggagcgtgtc ttagctgccg gcggcgaagc ctctaaagtt gtcttttccg gtgtggcaaa
    10501 atcgcacagc gaaatcaaac gagcattgga agtcgggatt cgttgcttta acattgaatc
    10561 ggtttccgaa cttcaccgca ttaaccaagt tgccggtgaa ctaggcaaaa tcgcaccgat
    10621 ttcactgcgg gtaaacccgg atgtggacgc ccacactcac ccatacattt ccaccggttt
    10681 aaaagaaaac aaattcggcg tgagcgttac tcaagcccgt gaagtgtatc gcttagccaa
    10741 aaccttaccg aatgtgaaaa ttaccggtat ggattgtcac atcggttcgc aattaaccga
    10801 attgcaacct tttttagatg caacggatcg cttaatcatc ttaatggagc aactgcgtga
    10861 agacggcatt gagctacacc acttagactt aggtggcggt ttaggcgtgc cttacaacgg
    10921 cgaagagcct ccgcatccga ccgaatatgc caaagccttg ctggaaaagc tcaaaggcta
    10981 tgaaaactta gaaatcatta ttgaaccggg gcgtgccatt accgcaaatg ccggtatttt
    11041 agtgacgaag gtggaatact tgaaacaaaa tgaagatcgt aattttgcga ttgtcgatac
    11101 cggtatgaac gatatgattc gcccggctct gtatgaagcc tatatgcaaa ttacggaagt
    11161 ggataaaacc ttaaaccgtg acaaagctgt ttacgatgtg gtcggtccga tttgcgaaac
    11221 ctcggatttc ttaggcaaac aaagagaatt ggcaatttct gaaggggatt taatcgctat
    11281 tcgttctgcc ggtgcttatg gggcggcgat gtcttcaacc tacaactctc gcccacaagc
    11341 ggcagaaatt atggttgatg gcaaccaagc ccatttaatt aaagcccgag ccacttttgc
    11401 tgatttatgg cgtttagaaa aattattacc ttaatgagga agaaaagatg aaattatatg
    11461 gattaaccgg tgcttgttca tttgtaccac acgttgccct agagtgggtg aaattgcgtg
    11521 ccaatcaaga ttatgcgttt caagctgtta gccgtgaatt tattaaatcg gcggaatatc
    11581 tggctttaaa ccctcgtggt aacgtaccat tgttggttga tggcgacttg gccctcacgc
    11641 aaaaccaagc tatcgtccac tatttagacg agctttatcc ggaagctaaa ttattcggca
    11701 gcaaaaccgc tcgtgataaa gccaaagcgg ctcgttggtt agcttttttc aattcagatg
    11761 tgcataaatc attcgtgcca ctgttccgct tgccaagtta tgcggaaggc aatgaaacgc
    11821 tcaccaaaac tattcgccaa caatcggctg agcaaatttt agaacaactg gcttttgcga
    11881 atgctcattt agaaaatcat attttctttg gcgaagaaat ttcggttgcc gatgcgtatc
    11941 tctacattat gctcaactgg tgtcgcctac tagggttgga tttctctcat ctttcccaac
    12001 tttctgcctt tatgcaacga gtggaggcag accaaggcgt agataatgtg cgtgagcaag
    12061 aaggcttaaa aggttaattc accattgttc atttaagacg gtagatttta tgttaaaatc
    12121 taccgtcttt tatttttagg aatcaccatg ctaaatcagg tttcaaacag cttgcttgct
    12181 ccaagtgggc ttgaattatc gcacttaact caagtgttag atcacttctc cggccgtcat
    12241 attgattatg ccgatctcta cttccaactc agccaagacg aaagctggag cttggaagac
    12301 agcatcatca aagaaggcgg tttttatatc gaccgagggt tcggtgtgcg agccatatca
    12361 ggcgaaaaaa ccggctttgc ctacgccgat caaatcacgt taaaacagct tgagcaatgt
    12421 gccgctgccg cacgttcaat cagcccaaca agcggtcaat tatcggtaaa aaatttcaaa
    12481 aaaacgaccg cttgttctcg ctacccggca atcaacccgc tagagaccat cagccgtgaa
    12541 caaaaggtcg aattgctcca tttggtggat aaaaccgctc gaatggcaga tccgagagtg
    12601 attcaagtga atgcgaatct ctcagcggta tatgaagaaa tgttagtggc agcgactgac
    12661 ggcacactgg ctgcggatat tcgcccgtta gtgcgtttat ctgtgtcggt actggtggaa
    12721 caaaatggca agcgtgaacg aggttcagca ggtgccggtg gtcgctttgg tttagattgg
    12781 ttcttagcac caagcgaaac cggctttagc cgtgcggaat cgcttaccaa agaagccgtt
    12841 cgccaagccc tcgttaatct cacagccatt cctgcaccgg caggcacgat gccgattgtt
    12901 ctcggtgctg gctggccggg cattttgctc cacgaagcag tcggacacgg cttggagggt
    12961 gattttaacc gtaaggaatc ttcgctcttc agtggtaaaa tcgggcaaat ggtcacctct
    13021 gagctttgca ccattgttga tgacggtacg gtgccgaata tgcgaggctc aatcacggta
    13081 gatgacgaag gcgtgccttc gcaacgtaat gtgttaattg aaaacggcat tctaaaaggc
    13141 tatatgcaag acaaactcaa tgcccgcctg atgggagttg ccccaaccgg caacggcaga
    13201 cgggaatctt acgctcattt gccgatgcca cgaatgacca acacctacct caccgaaggc
    13261 aatcacgaat ttgaagagat gattgaatcg gtcgaatacg gtttatatgc tcctcacttc
    13321 agtggtggac aagtggatat tacctccggc aaatttgtgt tctccaccgc cgaagcctac
    13381 ttaatcgaaa aaggcaaaat caccaaacct gttaccggtg caaccctgat cggcagcggc
    13441 atagaagcaa tgcaacaagt ttcaatggtc ggcaaaaaaa tggaactcga ccccggcatc
    13501 ggcacttgtg gcaaagaagg gcaatccgta ccagtcggcg tagggcagcc tacagtgaag
    13561 ttggataaaa ttacggtggg gggaagaggg taatctctcc ccgtttgcaa aatataaaga
    13621 aaatatcacc gcttgtagcg ataaaaggaa aacaaaatgg cttgggtaca aattcgttta
    13681 aacagtacag ataaacaggc tgaggaaatc agcgattttt taaccgagat tggagcggtg
    13741 tcagtgactt ttatggatag tcaagatacc ccaatttttg aacctcttcc gggggaaacc
    13801 cgtctttggg gaaataccga tgtggttggg cttttcgatg cggaaactga tatgaatctt
    13861 atcgtagaag cactaaaaac cagcaaattg gtggacgaaa actttgctca caaaatcgag
    13921 caaatcgaag acaaagactg ggaacgggag tggatggata atttccaccc aatgcagttt
    13981 ggcaaacggt tatggatctg cccaagctgg cgtgaagtac cagacccgaa tgcagtgaat
    14041 gttatgttag accctggttt agcatttggc accggcacac acccaacgac ctcgctttgc
    14101 ttacaatggt tagatagctt agatttagaa ggcaaaacgg ttatcgactt cggctgtggc
    14161 tccggtattt tagctatcgc tgcacttaaa ctcggtgcaa aacaagccat cgggattgat
    14221 atcgacccac aggcgatttt agctagtcaa aacaatgctg aggcgaacgg cgtagcagaa
    14281 aaactacaac tattcttagc caaagatcag ccaagagagt tacaagccga tgtcgttgtt
    14341 gcgaatattc tagccggccc actcaaagag ttagcaccga atatcatcac gctggttaaa
    14401 ccaaacggca atttaggctt atccggcatt cttgctactc aggctgaaag tgtgtgtgag
    14461 gcttatagcg aagcctttac gctagaccct gttgtagaaa aagaagaatg gtgtcgtatt
    14521 acaggccgca aaatctaata taagaagccc tgttttaaac agggcttact ttttgataaa
    14581 ttctactact ctttacctgt cttgggaatc gttctcccta aattaattaa cacaagcggt
    14641 agaaataaca ggaaaattta caaattacat aaatgaaaaa agccgactga aatcagtcgg
    14701 ctttctaaat aatggcaggg gcggagaggc tcgaactccc aacacccggt tttggagacc
    14761 ggtgctctac caattgaact acgcccctat tgataggtat tcattttgca cttatagggg
    14821 cgaattacta ttcgcccctg cattaaagat tattggcgga acggacggga ctcgaacccg
    14881 cgaccccctg cgtgacaggc aggtattcta accagctgaa ctaccgctcc taaattaata
    14941 gattgataat gccctactct cacatggcga atcaccacac taccatcggc gttactgcgt
    15001 tttacttctg agttcggtat ggagtcaggt agagccacag cactctggtt atcaatcaaa
    15061 ttctttcatt tagtcagttt actaaaatat agtttatact ttctaataaa ctcactaa
//
LOCUS       DANLZQ010000064        15008 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.064, whole genome shotgun sequence.
ACCESSION   DANLZQ010000064 DANLZQ010000000
VERSION     DANLZQ010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15008)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15008)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15008
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.064"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(<1..167)
                     /locus_tag="PXE50_001657"
     CDS             complement(<1..167)
                     /locus_tag="PXE50_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL5622561.1"
                     /translation="MKAQQLKNAILQLAIQGKLVPQDPNDEPASELLCKIQAEKDRLI
                     AEGKIKKNKKTA"
     gene            complement(373..2034)
                     /locus_tag="PXE50_001658"
     CDS             complement(373..2034)
                     /locus_tag="PXE50_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA binding domain-containing protein"
                     /protein_id="HDL5622562.1"
                     /translation="MLTWEHIEKMIAHQQFIREKAEIEYKEAKNSVPKDLWHTYSAFA
                     NSNGGFILLGIKENEQGHFPELLISGVNDPDKVIDELFSQSRSEKVSKSLLKDNDVKI
                     FQVENKSVIAIYVKAADILDRPIHLNGDYRLSYVRLNSGDHKLTSSELRSFISSYSQK
                     DADGRIVPYASIDDISLSTLDKYRNLLKAHNSTSKLLTLSDEKLLQEIGAYKKDLAQN
                     SEGITNAGLLMFGKHYAITSIFPHFFFEYYEEAGDVKRYTLRITDFDLEEGNLFEFYL
                     KIVPLIQELGKDKHFKLDNLTRTEENEITDGLREALINAITHADYFNNVRHLKVIKTK
                     DNKLIFENAGVMLVDIPTAIAGQRSECRNSIIHNLFHRLGLCERQGQGVRDIYSYWQS
                     RNFNSPLLESEIDYTKLTLTFQSGMIADFEEKFTACFGENFSELQPIQKDCLLFIAFN
                     QGKAMFAELAQKLPQYPRRNITLALARLKEKGLLTSSGSPRKQLYTLVNLEWIITEKS
                     QDDYFNPPFDQLDKASESKGAPPKKSKVKQVKQLPQNKANKLPPK"
     gene            complement(2047..3516)
                     /locus_tag="PXE50_001659"
     CDS             complement(2047..3516)
                     /locus_tag="PXE50_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent DNA methyltransferase"
                     /protein_id="HDL5622563.1"
                     /translation="MSLNNIVKRLQDVMRNDAGINGDAQRIEQIVWILFLKIYDAKEQ
                     EWELENDEYHSILPNFLRWQNWAEDKKDGKAMTGDELLSFVNNELFPTLKNLPISADT
                     PMNQRIIRAAFEDNNNYMKNGVLLRQVINIIDEIDFAHYQERHAFGDIYENILKSLQS
                     AGNAGEFYTPRAVTDFMVQAIKPKLGERIADFACGTGGFLTSALKVLESQIQTLSDRT
                     LFNNSVYGIEKKALPHLLCITNLLLHDIDNPNVHHDNALEKSVKDYTENDKFDVILMN
                     PPYGGSEIEQIKKNFPTALQSSETADLFMSVIMYRLKQNGRAAVVLPDGFLFGTDNAK
                     VAIKKKLLEEFNLHTIIRLPHSVFAPYTSITTNILFFDKTEPTRETWVYRLDMPQGYK
                     NFSKTKPMKLEHFNEVVEWWGNRQVIEVEGFDKAKSFTLKEMSDRQYNLDLCGFPHEE
                     EEILPPDELIADYQRKRTAYNADIDKILAEITDILGIKL"
     gene            complement(3564..5915)
                     /locus_tag="PXE50_001660"
     CDS             complement(3564..5915)
                     /locus_tag="PXE50_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HDL5622564.1"
                     /translation="MYTLQELKQMNEQEIRSRLISPAIRNAGWSDRQIGEEYTFKTNK
                     RFTDGQVVVDPKTTQTKRIEAKRVDYLLYTSANQKIAVVEAKDNHHSSRHGLQQAMTY
                     ARLLDVPFAYSSNGDEFVEHDFITGVQRTLPMSAFPTPDELHQRWAKQYTTEELKIIQ
                     QPYYTSSTDTFKEPRYYQEIAINRTVEAVAKGQQRILLVMATGTGKTYTAFQIIHRLK
                     TSGAKKKILFLADRNVLVDQPMMQDFKPFKDKMVKVSNKKLDSAYEVYLALYQQLDGE
                     TDNELFKQFQPSFFDLIVIDECHRGSAKEDSDWRAILKYFKDATHIGMTATPKETDDA
                     SNITYFGEPIYTYSLKQGIEDGFLAPYRVIRVDLDCDLKGWRPTKGLKDHQGNEIEDR
                     LYTVKDFDYNIVLNDRTRLVAERICEFLRKTDRLQKTIVFCANINHAERMVAELSRLN
                     ADMLKHNSKYVCQITGDQSGKGVDLEEFCDVANEGKDYPVIAVTSKLMTTGVDSKTCK
                     LVVLDANIQSMTEFKQIIGRGTRLRPDFGKEFFTILDFRGVTRLFADPAFDGEPVVIL
                     DVPENKPLVEQPLPKPSDKDIIKDPELKPYKIPVVVDFGTLKLRILDEKVQYLNEQGE
                     LVSEDIDLFSKREMQKEFGSYEQFQQQWTTSGEIFSKFYTDPKWLAALRQTRQFSHDV
                     EDFDVLSHISFGKKPLTKTERAEKVKQSGYVEQYSPENQQVLGLLLNEYVKSGNQDLT
                     KTEILKTPQFSRFGGLVSIIKNFGGKELYQKAVKGLEKMIYSE"
     gene            complement(5987..6880)
                     /gene="psd"
                     /locus_tag="PXE50_001661"
     CDS             complement(5987..6880)
                     /gene="psd"
                     /locus_tag="PXE50_001661"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251643.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HDL5622565.1"
                     /translation="MQLKKYPVPTYFQRVKIALHYLLPQLAITRAAGWLAEQKWGVVT
                     HLIIKLFAKQYKVNLSEAKKTEPSDYATFNEFFIRELKENARPINQDPNTLCLPAEGK
                     VSESGEISDNRLLQAKGHHFTLETLLANDEEMAAKFKDGTFITTYLSPTDYHRVHMPC
                     DGTLRKMIYVPGELFSVNPFLAEHVPNLFARNERVICEFDTAFGPMLQILVGATVTAS
                     MSTVWAGVINPPRADEVVVWNYETEGEKAIKLQKGEEMGAFRLGSTVINLFPKGKVHL
                     NPALIAGMQTRMGEELGRIIN"
     gene            complement(7045..7383)
                     /locus_tag="PXE50_001662"
     CDS             complement(7045..7383)
                     /locus_tag="PXE50_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEA family DNA-binding protein"
                     /protein_id="HDL5622566.1"
                     /translation="MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQI
                     TNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRTKNGNFKNIEQLAEVSGIGQATV
                     EKNRANIILE"
     gene            7676..8995
                     /locus_tag="PXE50_001663"
     CDS             7676..8995
                     /locus_tag="PXE50_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="opacity-associated protein A"
                     /protein_id="HDL5622567.1"
                     /translation="MTQNNFRKEPVFGESSVTSQDAEATKTDTAQAPYVSLRSTKAPG
                     HTFTPIMKRPDAKVEDHTADVFSAKQAKEFQFTPSSEATEAVEPDNTIHSVEESVSTA
                     SFNAVEAQENVEKEVVKPAPESFTTERIIPNAATAAAAATAAAAATKTKEIKAKMPPK
                     TRRLLLVALLALALLVLFFLLKPSTPETVEELQSQQGGSLPIEFRPVDEAEAKRAEEQ
                     ARAEQEAAEAAKAQEQAQAAQQESVTVAPAQTEQTMAKPSQDSQSQTQSQAVVEQPVA
                     VKPVENKPVVAQPAIKPKTENSVVFQPETTVKQQPKAPAKTEVKTERATLAAKETAKT
                     AAKPVEKAPTKTEAVKAAPAAESANAVATKTMTVPKGVSLMQVFRDNNLNISDVNAMS
                     KVNNVVSNLKVGERVTVRLDKNNRVVEMSIGSGGKFTRQANGSYTFK"
     gene            9113..9475
                     /locus_tag="PXE50_001664"
     CDS             9113..9475
                     /locus_tag="PXE50_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MliC family protein"
                     /protein_id="HDL5622568.1"
                     /translation="MLVACSTVVTPVEQIHQVQKEKESVKKVTKLIAQAPKVSLYRCE
                     NDKKVEVERQGRTKKALKKEIVTVSYQGTTHQLSPSVTRDGKKYTNIRWTWHETRSGK
                     AFLYNNTKKTLAANCIKQ"
     gene            9586..10623
                     /gene="waaF"
                     /locus_tag="PXE50_001665"
     CDS             9586..10623
                     /gene="waaF"
                     /locus_tag="PXE50_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HDL5622569.1"
                     /translation="MNILVIGPSWVGDMMMSHALYQQLKIQYPNCQIDVMAPDWCCPL
                     LARMPEVRNAISMPIGHGSFRLCERYRLGKSLRNQYDMAIVLPNSLKSAFIPLFAKIA
                     RRRGWKGESRYFFLNDLRSNKNDYPMMVQRYVALAFEKATVPTAQQLPIAYPYLTTDS
                     EQIEQTKAKFEKQLAYAENRPAIGFCPGAEFGPAKRWPHYHYAILAKMLIEQGYSVRL
                     FGSKKDEAAGEQIRLALPENLQRYCLNLAGQTDLNQAVDLIADCNAVVSNDSGLMHIA
                     AALNKPLVALYGPTSPQYTPPLSQNAEIMRLIEGGLIKIRKGEGAEGYHQSLIDIQPE
                     MVMDKLAELLV"
     gene            10690..11649
                     /gene="rfaC"
                     /locus_tag="PXE50_001666"
     CDS             10690..11649
                     /gene="rfaC"
                     /locus_tag="PXE50_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase RfaC"
                     /protein_id="HDL5622570.1"
                     /translation="MKILIVKTSSMGDVLHTLPAITDMQNAIPDLKVDWVVEENFTEI
                     PAWHSAVNKVIPVAIRRWRKNLCQRQTWVEWQQFLKQLKSEQYDAVIDAQGLIKSAVL
                     VTRQAKGKKFGYDKNSAREGLSSLFYDETFNIPYQQHAVERIRKLCAKSLGYALPTER
                     GDYCIAQHFAKNPQKTTAYIMLIHATTRADKHWQEAYWAELIQALDKHNLAVRLPWGN
                     QAEKERAERLASVANNAKVLPKMSLTDIATQLAGAAAVVSVDTGLSHLAAALDKPNVI
                     LYGATDPKLIGAYGQNQFYLKADKMENITSSQVLEKLLPLINK"
     gene            11770..12144
                     /gene="rpsL"
                     /locus_tag="PXE50_001667"
     CDS             11770..12144
                     /gene="rpsL"
                     /locus_tag="PXE50_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005306278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HDL5622571.1"
                     /translation="MATINQLVRKPRVKKVVKSNVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCRIRLTNGFEVTSYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGAL
                     DCAGVKDRKQGRSKYGVKRPKA"
     gene            12275..12745
                     /gene="rpsG"
                     /locus_tag="PXE50_001668"
     CDS             12275..12745
                     /gene="rpsG"
                     /locus_tag="PXE50_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007526570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HDL5622572.1"
                     /translation="MPRRRSIEPRKILPDPKFGSELLAKFINVLMVDGKKSTAEKIVY
                     GALETLTQRSGKEALEAFEIALENVRPTVEVKSRRVGGSTYQVPVEVRPTRRNALAMR
                     WIVEAARKRGDKSMALRLANELSDAADNKGSAVKKREDVHRMAEANKAFAHFRW"
     gene            12847..14949
                     /gene="fusA"
                     /locus_tag="PXE50_001669"
     CDS             12847..14949
                     /gene="fusA"
                     /locus_tag="PXE50_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020455498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HDL5622573.1"
                     /translation="MARTTPISLYRNIGISAHIDAGKTTTTERILFYTGVSHKIGEVH
                     DGAATMDWMEQEQERGITITSAATTAFWSGMSQQYPQHRINVIDTPGHVDFTIEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRTGANFLRVVEQIKT
                     RLGGNSVALQLPIGAEDSFKGVVDLIKMKAINWNEADQGMTFTYEDIPADMLEACEEH
                     RAMLVEAAAEASEELMEKFFSGEELTEDEIKAALRQRVLAGEVIPVCCGSAFKNKGVQ
                     AMLDAVIDYLPAPTDIPAIKGINEDETEGERHASDDEPFASLAFKIATDPFVGNLTFF
                     RVYSGVINSGDTVYNSVKQKRERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVGTG
                     DTLCAIDAPIILERMEFPEPVISVAVEPKTKADQEKMGLALGRLAQEDPSFRVHTDEE
                     SGETIISGMGELHLDIIVDRMKREFKVEANIGKPQVSYRETIRTRVNDVEGKHAKQSG
                     GRGQYGHVVIDLYPLDAEGPGYEFVNEIKGGVIPGEYIPAVDKGIQEQLKSGPLAGYP
                     VVDLGVRLHFGSYHDVDSSELAFKLAASLAFKAAFAKASPVLLEPIMKVEVETPPDYV
                     GDVIGDLSRRRAMVNGQEANEFVVKINAEVPLSEMFGYATDLRSQTQGRASYSMEPLK
                     YAEAPKNVADAIIEARRK"
BASE COUNT         4441 a         2923 c         3158 g         4486 t
ORIGIN      
        1 gcagtttttt tgtttttttt gatctttcct tctgcaatca agcggtcttt ttctgcttgg
       61 attttgcaaa ggagttcgct tgccggttca tcatttggat cttgtggaac gagcttgcct
      121 tggattgcta gttgtaggat tgcgtttttt agctgttggg ctttcatttt ttattctcaa
      181 taatcggttg ttatttctta aagtatcttt gattacggtg ttttgggttt tctgggaatt
      241 gcatttcgat cacaccaagc gttagtgcag gttttaaata ctgcatacgg aaatgcttat
      301 catcttttaa cctgagtttt ttcataattt ctttgctctt catcggctca agcaacactg
      361 aaagtaagcg atttacttcg ggggtaattt gtttgctttg ttctggggta attgtttgac
      421 ttgcttcact ttgcttttct tcgggggggc gcccttactc tcactagctt tatcaagttg
      481 gtcgaaaggt ggattaaaat aatcatcttg tgatttctct gtgattatcc attctaaatt
      541 cactagggta tagagttgtt ttctcggact ccccgaactg gttagtaagc ctttttcttt
      601 cagtcgtgct agtgccaaag taatatttct gcgtggatat tggggcagtt tttgtgctaa
      661 ttctgcaaac attgctttac cttgattgaa ggcgataaag agtaagcaat ctttttgaat
      721 aggctgtaac tcagagaaat tttcgccaaa gcaagcggta aatttttcct caaaatctgc
      781 aatcatacct gattgaaaag ttaaggtgag tttagtgtaa tcaatttcac tttctaaaag
      841 cggtgaattg aaatttcggc tttgccaata tgaataaata tcccgaacgc cttgtccttg
      901 tcgctcacat agccctaaac ggtggaataa gttatgaata atagaattac ggcattccga
      961 tctttgccct gcaatagccg tgggaatatc aaccaacatt actcctgcat tttcaaaaat
     1021 cagtttgtta tctttggttt taatgacttt tagatggcga acattgttaa agtaatctgc
     1081 gtgagtaatt gcattgatta gagcttcccg tagcccgtca gtaatttcat tttcctcagt
     1141 acgggttaaa ttatctaatt tgaaatgttt atctttacca agctcttgaa taagtggcac
     1201 aattttcaag taaaattcaa agagattgcc ttcttcaaga tcaaaatcgg taatccgtaa
     1261 tgtatagcgt tttacatcac cagcttcttc gtaatattca aaaaagaagt ggggaaatat
     1321 gcttgtaatg gcatagtgct taccaaacat caataagcct gcattggtaa tgccctcgct
     1381 attctgtgct aaatcttttt tataagcccc aatttcttgc agcaatttct catcggataa
     1441 cgtaagtaat tttgatgtgc tgttatgggc tttcagcaga tttctgtatt tatccaatgt
     1501 gcttaaactg atatcatcaa tagaagcata aggcacaatt ctcccatcag catctttttg
     1561 gctatagctt gaaatgaaag aacgcagttc agaggaggtg agtttatgat cgcctgaatt
     1621 taaacgaaca taagaaagtc gataatcacc atttaaatgg ataggacggt ctaaaatatc
     1681 agctgctttc acataaattg caatcacgct tttattttca acttgaaaga ttttcacatc
     1741 attatccttt aataaggatt tactgacttt ttcactacga gattgggaaa ataattcatc
     1801 aatgacttta tcaggatcat taacaccaga aattagcagt tcaggaaaat gtccttgttc
     1861 attttccttt attcctaata aaataaagcc accattgctg tttgcaaaag ccgaataagt
     1921 atgccaaaga tcttttggca cactattttt tgcctcttta tattcaattt ctgccttttc
     1981 tcggataaat tgctgatgtg caatcatttt ttcgatatgt tcccaagtca gcattttatg
     2041 ctcctattac agtttaatgc ctaaaatatc ggtaatttct gctagaatct tatcaatatc
     2101 agcattgtaa gcggtgcgtt ttcgctgata atctgcaatt agttcatcag gcggaaggat
     2161 ttcctcttct tcgtgaggaa agccacataa atcgaggttg tattgacggt cggacatttc
     2221 ctttaatgta aaacttttcg ctttgtcaaa cccttcgact tcaatcactt ggcgatttcc
     2281 ccaccattca acaacttcgt tgaaatgttc caatttcatc ggtttagttt tggagaaatt
     2341 tttataaccc tgtggcatat caaggcgata aacccaagtt tcacgggttg gctcggtttt
     2401 atcaaaaaac agaatattag tcgtaatcga ggtataaggg gcaaagacac tatgcggtaa
     2461 gcggataatc gtatgcagat taaactcttc taatagcttt ttcttaatcg caactttggc
     2521 attatctgtg ccgaacaaaa atccgtcagg cagcaccacc gcagcccgtc cattctgttt
     2581 taggcggtac ataattaccg acataaacag atcagcggtt tcactgctct gtaaagccgt
     2641 agggaaattc tttttaattt gctcaatttc tgaacctccg taaggtggat tcatcaaaat
     2701 cacatcaaat ttatcatttt cggtgtaatc tttgaccgat ttttctagag cattatcgtg
     2761 atgtacattc ggattatcaa tatcgtgcaa caataaattg gtaatacaaa gcaggtgagg
     2821 aagggctttt ttctcaatgc catacacaga attattgaat aaagtgcggt cagaaagggt
     2881 ttgaatttga ctttccaata cctttaacgc cgaagttaaa aaaccacccg tcccacaggc
     2941 aaaatcggca atgcgttcgc caagtttcgg tttgattgct tgtaccataa aatcggttac
     3001 agcgcgaggg gtataaaatt cccctgcatt acctgcactt tgtaaacttt tgaggatatt
     3061 ttcataaata tcgccaaagg cgtgtcgttc ttggtaatgg gcaaaatcaa tttcatcaat
     3121 gatattgata acctgacgta ataacacccc atttttcata tagttgttat tatcttcaaa
     3181 agcagcacgg ataatccgtt ggttcatcgg cgtatcggct gaaataggca gattttttaa
     3241 agtcgggaaa agttcgttat tgacgaaaga gagtaattca tcaccagtca tcgctttgcc
     3301 gtctttttta tcttccgccc aattttgcca gcgtaaaaaa ttcggcaaaa ttgagtgata
     3361 ttcatcgttt tccagttccc actcttgttc tttagcatcg taaattttca agaataagat
     3421 ccagacgatc tgttcaatgc gttgggcatc accgttaatc cctgcatcgt tacgcattac
     3481 atcttgcagg cgttttacta tgttgttgag gctcattgtg atccttgttt atctgtaaaa
     3541 ttttgttgta aaataaccgc ttgttattcc gaataaatca tcttttctaa gccttttacc
     3601 gctttctggt agagttcttt accgccgaaa tttttaataa tagacactag acctccaaaa
     3661 cggctgaatt gcggtgtctt taaaatttcg gttttagtca gatcttgatt gccggatttg
     3721 acatattcat taagcagcaa ccctaaaact tgctggtttt cgggcgaata ctgctccaca
     3781 tagccacttt gtttcacttt ttctgctcgt tcggttttag tcagtggttt tttgccaaag
     3841 gagatgtggc ttaatacatc aaagtcttca acatcgtggc tgaattggcg tgtttggcga
     3901 agggctgcca gccattttgg atcggtgtaa aatttcgaga aaatttcacc gcttgttgtc
     3961 cattgctgtt ggaactgttc gtaactgccg aactcttttt gcatttcccg ttttgagaac
     4021 agatcaatat cttcagaaac cagctcgccc tgctcattca gatattggac tttctcgtct
     4081 aaaatgcgta atttgagtgt gccgaaatcg acaactaccg ggattttata tggctttagc
     4141 tcggggtctt taatgatgtc cttatcactg ggtttaggaa gcggttgttc gacaagtggc
     4201 ttattttccg gtacatctaa aatcaccacc ggctcaccat caaatgccgg atcagcaaac
     4261 aggcgagtaa cgcctcgaaa atctaaaatg gtgaaaaatt ctttgccgaa atcagggcga
     4321 agacgagtgc ctcgtccgat aatttgttta aattccgtca ttgattgaat gtttgcatca
     4381 agtacaacca gcttacaggt tttgctatct acacctgttg tcatcaattt agaggttacg
     4441 gcaatcacag ggtaatcttt cccttcattt gctacatcac aaaattcttc taaatcaacg
     4501 cctttgcctg attggtcgcc tgtaatttgg cagacatatt tggaattgtg tttcaacata
     4561 tcggcattga ggcgtgaaag ctctgccacc attcgctctg catggttgat gttggcacag
     4621 aagactattg ttttctgcaa gcggtcggtt ttgcgtaaaa attcgcaaat tctctccgca
     4681 accaagcggg tgcgatcatt tagcacaatg ttgtaatcga aatctttgac tgtatagagg
     4741 cgatcttcaa tctcattacc ttgatgatct tttaaacctt tggttggtcg ccagcctttt
     4801 aaatcacagt ccagatcaac acgaatcact cgataagggg caagaaagcc gtcttcaata
     4861 ccttgtttga ggctataggt ataaatcggc tcgccaaaat aggtaatgtt gctggcatca
     4921 tcggtttctt tgggggttgc agtcataccg atatgggtgg cgtccttgaa atacttcaaa
     4981 atagcacgcc agtcagaatc ttcttttgct gaaccacgat gacattcatc gatcacaata
     5041 agatcaaaga aagagggttg gaactgctta aacagttcgt tatcggtttc accgtcaagc
     5101 tgttgataaa gtgcaagata gacttcataa gcactgtcga gctttttatt gctgactttc
     5161 accattttgt ctttaaacgg tttgaagtct tgcatcattg gctgatcgac tagtacattg
     5221 cgatcggcaa gaaataaaat tttctttttc gcaccactgg tttttaaacg atggataatt
     5281 tggaaagccg tataggtttt acccgtgcct gttgccatta ccaataaaat cctctgctga
     5341 ccttttgcta cagcttcaac agtacggtta atcgcaattt cttggtagta acgaggctct
     5401 ttaaaggtgt cagtgctact ggtgtaataa ggctgttgaa taattttcag ctcttcggtg
     5461 gtatattgtt tcgcccaacg ttggtggagt tcgtcgggag taggaaatgc tgacatcgga
     5521 agggttcgtt gtacgccagt gataaaatcg tgttccacaa actcatcacc atttgagcta
     5581 tatgcaaaag ggacatcaag caatcgagcg tatgtcattg cttgctgtaa gccgtgtcgg
     5641 gaagagtgat ggttatcttt ggcctcgacc acggcaattt tttgatttgc ggaagtatag
     5701 agcagataat caacccgttt tgcttcgatg cgtttagttt gcgtcgtttt tggatcaaca
     5761 actacttgcc catctgtaaa tcgtttattg gttttaaatg tgtactcttc gccaatttgt
     5821 ctatccgacc atcctgcatt tctaattgca ggagagatta atcgagagcg aatttcttgc
     5881 tcgttcatct gctttaattc ttgaagtgtg tacatatttt tccttccgat aagagtttct
     5941 tatcggaaga ttatagcaaa cagtttaggt aaaattaact caggatttaa ttgataattc
     6001 tacccaactc ttcccccatt cgggtttgca ttcctgcaat aagtgcaggg ttgagatgta
     6061 ctttaccttt cgggaagagg ttaattacgg ttgagcctaa acggaaagct cccatttctt
     6121 cgcctttttg gagtttgatg gctttttcgc cttcggtttc gtaattccaa actaccactt
     6181 catcagcgcg aggcggatta attacgccag cccaaaccgt actcatactt gcggtaaccg
     6241 ttgcaccgac caaaatctgt agcattggtc cgaatgcggt gtcaaattca caaatcacac
     6301 gctcattgcg agcgaataag tttggaacgt gttcggctaa aaacggattg acggagaaca
     6361 attcgcccgg cacataaatc attttacgca atgttccatc gcacggcata tgtacacgat
     6421 ggtaatcagt tggcgataag taggtggtaa taaatgtgcc gtctttaaat tttgccgcca
     6481 tttcttcatc atttgccaat aaggtttcta gcgtaaaatg atgccctttt gcttgtaata
     6541 aacggttatc cgaaatttcg cctgattcgc tgactttacc ttctgccggt aagcaaagtg
     6601 tatttggatc ttgattaatc gggcgtgcgt tttcttttaa ttcacggata aaaaattcat
     6661 taaaagtagc ataatctgac ggctcggttt ttttagcttc agataaattg actttatact
     6721 gttttgcaaa cagtttgatg ataaggtgag taactacgcc ccatttttgc tctgctaacc
     6781 aacctgccgc acgggtaatt gccagttgtg gcagtaaata gtgcagagcg attttcacac
     6841 gttggaaata ggttggaact ggatattttt ttaattgcat tgcgttttcc ttttatttaa
     6901 aaacgagaat ttgcgtttaa ttgggggcga agtatagcaa atacaatgca aaatagataa
     6961 aaaatcttta aggtgttgaa gtggctacaa agaaaaaaac agataggggc tttgtaggaa
     7021 ttccacttca acaatttggt tgtcttattc taaaataata ttggctcgat ttttttctac
     7081 cgttgcttgc ccaattccgg agacttcagc aagttgctca atgtttttaa aattgccgtt
     7141 tttagtacgg taatcgacaa tcgcttgagc ttttttctgc ccaattccca ctagcttgtc
     7201 ttgcaattca gcagcactag cagtattgat atttaccgca ttagcgttgg tgatttgtgt
     7261 ttgctgtacg ggttgagtga ctgcattttg ttcaacaggc attgtagttg gcggtgtttg
     7321 ggcaaaagcc attgcattta agccaaacaa gaatgttaga ccaagttgtt tgattttctt
     7381 cataggattt ccttattagt tgttgaaagg tcgaaaggaa gattaagagg gaataaaata
     7441 gaactcaacc ggcaaaaata aatttttcga cacagatcga aaaaatagaa aatggctaaa
     7501 cttctagacg tgcatttggt ctgaaattca atgaaagtaa atagatttgc aaaaaattag
     7561 gcaaaaatga ccgctagttg cgtaaattta gttaaataaa ttcaaatagc ggctgaattg
     7621 ctttagaata tcgccatttt tatactcatt aacaacgcta ttatttggaa ttaatatgac
     7681 acaaaataat tttcgcaaag aaccggtttt tggtgaatct tcggttacct ctcaagacgc
     7741 tgaagcaacc aaaacagata cagctcaagc cccttatgtt tcgttgcgtt caaccaaagc
     7801 accggggcat acgtttaccc caattatgaa aagacctgat gctaaagtag aagatcatac
     7861 ggctgatgtc ttttcggcta agcaggcaaa agaattccaa tttactccaa gttcagaagc
     7921 tacagaagca gtagagccgg ataataccat tcattcggtt gaagaaagtg tatcaaccgc
     7981 atcttttaac gcggttgaag cacaagaaaa tgtggaaaaa gaagtggtta aacctgcacc
     8041 cgagagtttc actactgagc gtattattcc aaatgcggca acagctgccg cagcagccac
     8101 tgcggcagct gcagccacta aaaccaaaga gattaaagct aaaatgccac ctaaaacccg
     8161 ccgtttatta ttagtggcat tgttggcgtt agcattattg gtactgtttt tcttgttaaa
     8221 accaagtacg ccggaaactg tcgaagagct acaatctcag caaggtggta gcttgccgat
     8281 tgaattccga ccggttgatg aagctgaagc gaaacgtgcg gaagaacaag ctcgtgcaga
     8341 acaagaagcc gctgaagctg caaaagctca agaacaagct caagccgctc aacaagagtc
     8401 tgtaacagtt gctccagccc aaaccgagca aacaatggct aaaccgtcac aagatagcca
     8461 gtcgcaaaca caatcacaag cagtagttga gcaacctgtt gcggtgaaac cggtggaaaa
     8521 taaaccggtt gttgcacaac cggcgattaa gcctaaaacg gaaaatagcg tggtgttcca
     8581 acctgaaaca acggtaaaac aacagcctaa agcccctgct aaaactgaag tgaaaaccga
     8641 acgtgctaca ctggcagcaa aagaaacggc aaaaacagca gctaaaccag ttgagaaagc
     8701 tccgacaaaa actgaagcgg taaaagcagc accggctgcc gagtcggcaa atgcggtagc
     8761 aaccaaaaca atgactgtgc caaaaggtgt atcactaatg caagtgttcc gtgataacaa
     8821 tttaaatatc tcagacgtta atgcgatgag caaagtcaat aacgtggtga gtaatttaaa
     8881 agtaggcgag cgagtaaccg ttcgtttaga taaaaataac cgtgtggttg aaatgagcat
     8941 tggctcaggc ggcaaattta cccgtcaagc aaacggtagc tatactttta aataaataaa
     9001 atgaagaaaa agagcaacgc tacaaacgtt gctcttttat ttaaaaagga gataaaggat
     9061 gaatttattt tgcccctctt acaaacttat ctacttaacg ctaagctcag cgatgttagt
     9121 tgcttgtagt acagtggtta cccctgttga gcaaattcat caagtacaaa aggaaaaaga
     9181 gtcagtaaag aaagtgacta aactgatagc acaagcacct aaagtgagtt tatatcgttg
     9241 tgagaatgat aagaaggttg aagttgaacg ccagggacga acaaaaaaag cgttaaaaaa
     9301 ggaaatagtc acagtgagtt atcaagggac aacgcatcag ctttcacctt ctgtaacgag
     9361 agatggtaaa aaatacacta atatccgttg gacttggcat gaaacccgta gtggtaaagc
     9421 atttttgtat aacaacacta aaaaaacgtt agcggcaaat tgcataaagc agtaacaagc
     9481 ggacacaaaa agtatcgctt tttgaacgtt ggctttgcca acggcagcga agctgtgaac
     9541 aatccttaca aggattgtga ataaattttt aagagaattt tgcaaatgaa tattttagtt
     9601 ataggaccgt cttgggtggg tgatatgatg atgtcgcacg cactttatca acagcttaaa
     9661 atacagtatc cgaattgcca aattgatgta atggcacccg attggtgttg tccgctttta
     9721 gcccgtatgc ctgaggtgcg taatgcgatt tcaatgccga ttggacacgg ttcatttcgt
     9781 ttgtgtgaac gctaccgact cggaaaatcc ctgagaaatc aatatgatat ggcgattgta
     9841 ttgcctaatt cattaaagtc tgcctttatt ccactgtttg cgaaaattgc gagacgtcgt
     9901 ggttggaaag gggaaagtag atattttttc ttaaatgatc ttcgcagtaa taaaaacgac
     9961 tacccaatga tggtgcaacg ctatgtagcc ttggcgtttg aaaaggctac tgttccaacc
    10021 gcacaacagt tgccgattgc ttatccatac ctcacaactg atagcgaaca aattgagcag
    10081 accaaagcga aatttgaaaa acagttggct tatgcggaaa accgtcctgc catcggcttt
    10141 tgtccagggg ctgaatttgg accggcaaaa cgttggccgc attatcatta tgcaatattg
    10201 gcaaaaatgt tgattgagca aggctattcg gtacggttat ttggctcgaa aaaagatgaa
    10261 gccgccggtg agcaaattcg cttggcatta cctgaaaatt tacaacgcta ttgcctgaat
    10321 ttagccgggc aaaccgattt aaaccaagcg gtagatttga ttgcagattg taatgcagtc
    10381 gtgagcaatg actccggctt aatgcacatt gccgcagcac taaataaacc gctggtcgcc
    10441 ttatatggac cgaccagccc acaatatacg ccgccgttat cccaaaatgc cgagatcatg
    10501 cgcttaattg aaggcggttt gattaaaatc cgcaaaggcg aaggggcaga gggctatcac
    10561 caaagtttaa ttgatattca gcctgaaatg gtgatggaca aattagctga actgttagtt
    10621 taaatggata acaagcggtt gaatttgcca attttttgca aaaaaagacc gcttgtttgt
    10681 ttataaaaga tgaaaatttt aatcgttaaa acctcatcaa tgggagatgt attacatacg
    10741 cttccagcca taaccgatat gcaaaatgct attcccgatt taaaagtaga ttgggtggtg
    10801 gaggagaatt ttaccgaaat tcctgcgtgg cattcagcgg taaataaagt aattccggtg
    10861 gctattcgcc gctggcggaa aaacctttgc caaagacaga cttgggtaga atggcagcag
    10921 tttttaaaac agctaaaaag tgagcagtat gatgcggtaa ttgatgctca agggctgatt
    10981 aaaagtgcgg tgttagtaac tcgccaagcc aaaggcaaaa aatttggcta tgataaaaac
    11041 tctgcccgag aagggttaag tagtctgttt tacgatgaaa cgtttaatat cccctaccaa
    11101 caacacgctg tagaacgcat cagaaaatta tgtgcaaaat cattaggtta tgctttgcca
    11161 accgaacggg gcgattattg cattgcacaa cattttgcaa aaaatcctca aaaaacgacc
    11221 gcttacatta tgctgattca cgccactacc cgagcggata aacattggca agaagcctat
    11281 tgggcggagt tgattcaagc gttggataag cacaatctgg cagtcagatt gccttgggga
    11341 aaccaagccg aaaaagaacg ggcggagcgt ttagcgagtg tggcgaataa tgctaaggta
    11401 ttgccaaaaa tgagcttaac cgatattgct actcaacttg cgggagcagc ggcagtggtg
    11461 tcggtggata ccggcttgag ccatttggcg gctgcgttag ataagccaaa tgtgatttta
    11521 tatggggcaa ccgatccaaa acttatcggg gcttacgggc aaaatcagtt ttatctaaaa
    11581 gcagataaaa tggaaaatat tacctcttca caagtgctag aaaaattact tccattgatt
    11641 aacaaatgat cattgttgtt ctcttactgt gcttgacttt tatccacgtt caatttagaa
    11701 ttcaccgtcc tttcgtgtga aaggatgttt ttaattttat ttttaataat tttaactgga
    11761 gcttttttaa tggcaactat caaccagcta gtacgcaaac cgcgtgtgaa aaaggttgta
    11821 aaaagtaacg ttcctgcatt agaggcttgc ccgcagaaac gtggcgtgtg tactcgtgta
    11881 tacactacta cacctaaaaa accgaactca gcattacgta aagtatgtcg tattcgttta
    11941 acaaatggct ttgaagtaac ttcatacatc ggtggtgaag gtcacaacct tcaagaacac
    12001 agtgttgtat taatccgtgg tggtcgtgtt aaagacttac cgggtgttcg ttaccatact
    12061 gtacgtggtg cacttgactg tgcaggcgtt aaagatcgta aacaaggtcg ttctaaatac
    12121 ggcgttaaac gtcctaaagc ttaatggttc tccgttgagt aaggccaaac gtctaaattt
    12181 taatatttaa accataaact ccagtcaaga tgccttaagg cagattagat gagttttgga
    12241 tatcctgaag atttaatata cggagaaatt tccaatgcca cgtcgtcgta gtattgaacc
    12301 acgcaaaatt cttccagatc cgaagttcgg ttcagaatta cttgcaaaat ttattaacgt
    12361 gttaatggta gatggtaaaa aatctactgc agaaaaaatc gtttacggtg cattagaaac
    12421 tttaacacaa cgttctggta aagaagcgtt agaagctttc gaaatcgcat tagaaaacgt
    12481 acgtccaact gttgaggtta aatctcgccg tgtgggtggt tctacttacc aagttcctgt
    12541 agaagttcgc ccaacccgtc gtaatgcttt agcaatgcgt tggatcgtag aagccgctcg
    12601 taaacgtggt gacaaatcaa tggcattacg tttagctaac gaattatcag atgcagcaga
    12661 caacaaaggt tcagcagtga agaaacgtga agacgttcac cgtatggctg aagctaacaa
    12721 agcgtttgct cacttccgtt ggtaatcgtt taagcaaact tatcaaaggc ttcatctcag
    12781 tttgcggtga agccttaccc ttattaagaa ttttaattta aaccccaaac aaggtaataa
    12841 ataaaaatgg ctcgtacaac ccctatttca ctttaccgta acatcggtat cagtgcgcac
    12901 atcgatgcgg gtaaaacaac tactacagag cgtatcttgt tctatacagg tgtaagtcac
    12961 aaaatcggtg aagttcacga tggtgctgca acaatggact ggatggaaca agaacaagag
    13021 cgtggtatca cgatcacatc tgctgcaaca acagcattct ggtctggtat gtcacaacaa
    13081 tatccacaac accgtatcaa cgttattgat actccgggac acgttgactt tactatcgaa
    13141 gtagaacgtt caatgcgtgt acttgatggt gcggtgatgg tttattgtgc agttggtggt
    13201 gttcaaccac aatctgaaac tgtatggcgt caagctaaca aatataaagt gccacgtatc
    13261 gcgttcgtaa acaaaatgga ccgtacaggt gcaaacttct tacgtgttgt tgagcaaatc
    13321 aaaacgcgtt taggtggtaa ctcagttgca ttacaacttc caatcggtgc agaagacagc
    13381 ttcaaaggtg ttgttgattt aatcaaaatg aaagcaatca actggaacga agctgatcaa
    13441 ggtatgacct tcacttatga agatattccg gcagatatgc ttgaagcttg tgaagaacac
    13501 cgtgcaatgc ttgttgaagc agcagctgaa gcttctgaag aattaatgga aaaattcttc
    13561 tctggtgaag aattaactga agatgaaatc aaagcagcat tacgtcaacg tgtattagca
    13621 ggtgaagtaa tccctgtttg ctgtggttct gcatttaaaa acaaaggtgt acaagcaatg
    13681 cttgatgcgg taatcgatta cttaccggca ccaactgata ttcctgcaat taaaggtatc
    13741 aatgaagatg aaactgaagg tgagcgtcac gcaagcgacg atgagccatt tgcttcatta
    13801 gcattcaaaa ttgcaacaga cccattcgta ggtaacttaa ccttcttccg tgtttactct
    13861 ggtgtaatta actctggtga tacagtttac aactcagtaa aacaaaaacg tgaacgtttt
    13921 ggtcgtatcg tacagatgca cgcaaacaaa cgtgaagaga tcaaagaagt tcgtgcgggc
    13981 gatatcgctg cagcaatcgg tttaaaagat gttggtacag gtgacacatt atgtgcaatc
    14041 gatgcaccaa tcattcttga gcgtatggaa ttccctgagc cggtaatctc tgttgcggtt
    14101 gaaccaaaaa ccaaagctga ccaagagaaa atgggcttag ctttaggtcg tttagcacaa
    14161 gaagaccctt cattccgtgt tcacacagat gaagaatctg gtgaaacgat catttcaggt
    14221 atgggtgagt tacacttaga catcatcgtt gaccgtatga aacgtgagtt taaagtggaa
    14281 gcaaatatcg gtaaaccaca agtatcttac cgtgaaacta tccgtactcg tgttaatgat
    14341 gttgaaggta aacacgcaaa acaatctggt ggtcgtggtc aatatggtca cgttgtgatc
    14401 gacttatacc cattagatgc tgaaggtccg ggttatgagt ttgtaaacga gatcaaaggt
    14461 ggtgtaatcc ctggtgaata cattcctgcg gttgataaag gtatccaaga acagcttaaa
    14521 tctggtccgt tagcaggtta cccggtagta gatttaggtg tgcgtttaca cttcggttca
    14581 taccacgatg ttgactcatc tgaacttgcg tttaaacttg ctgcatcatt agcatttaaa
    14641 gcggcgttcg caaaagcaag cccggtatta cttgagccaa tcatgaaagt ggaagttgaa
    14701 actccaccgg attacgtggg tgatgtaatc ggtgacttaa gccgtcgtcg tgcaatggtt
    14761 aacggtcaag aagcgaacga gttcgttgtt aagatcaatg ctgaagttcc actttcagaa
    14821 atgtttggtt atgcaacaga cttacgttca caaactcaag gtcgtgcatc atactctatg
    14881 gaacctttaa aatatgctga agcaccgaaa aacgttgctg atgcaattat tgaagctcgt
    14941 agaaaataat ttgtttaacc tgagccatag caatagggct atggctcatt ttttaggaag
    15001 atattaaa
//
LOCUS       DANLZQ010000065        14960 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.065, whole genome shotgun sequence.
ACCESSION   DANLZQ010000065 DANLZQ010000000
VERSION     DANLZQ010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 14960)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14960)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14960
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.065"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            137..865
                     /gene="fabG"
                     /locus_tag="PXE50_001670"
     CDS             137..865
                     /gene="fabG"
                     /locus_tag="PXE50_001670"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012771807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HDL5622574.1"
                     /translation="MNNTVLITGSSRGIGKAIALTLAQQGFDIVVHCRSRVEEAEAVA
                     QAVRNLGKNARVLQFDVADREKVRSILEADVEQHGAYYGVVLNAGLTRDNAFPALTDE
                     DWDSVLRTNLDGFYNVLHPIMMPMIRRRKAGRIVCITSVSGLIGNRGQVNYSASKAGI
                     IGAAKALAIELAKRKITVNCVAPGLIDTDILDENVPIEEILKMIPAGRMGDPDEVAHA
                     VAFLMDEKATYITRQVIAVNGGLC"
     gene            928..2073
                     /locus_tag="PXE50_001671"
     CDS             928..2073
                     /locus_tag="PXE50_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014167571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
                     /protein_id="HDL5622575.1"
                     /translation="MKRVVITGIGVVTAFGKEWAEIHGYQPPKHWNRKQLRSLGRVSQ
                     FVVEASERALAQAGLLDENGVIFDWLKDRRMGVACGSSTGSTNDIKDAAELLMTGKSD
                     GFNANTYVRMMPHTTAANIGIFFGLTGRIIPTSSACSSGSQGIGYAYEAIKYGMIPMM
                     LAGGGEEFCASKVYVFDSLYAASRRNDNPKGTPRPYDKDRDGLVIGEGAGMFVLEELE
                     HALARGANIIAEVVGYGANSDGSHVTRPQATTMQRCMELALKDAGIQPNQVGYVNGHG
                     TATEQGDIAETQATTAVFGKIPLSSQKSYLGHTLGACGALESWFSIEMMRDGWFAPTL
                     NLENVDERCGDLDYLQGDGREIHTDYVMNNNFAFGGVNTSLIFKRWK"
     gene            2087..2992
                     /locus_tag="PXE50_001672"
                     /pseudo
     CDS             2087..2992
                     /locus_tag="PXE50_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251927.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dialkylresorcinol condensing enzyme"
     gene            3015..4157
                     /locus_tag="PXE50_001673"
     CDS             3015..4157
                     /locus_tag="PXE50_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HDL5622576.1"
                     /translation="MLSNVYITNTSAFLPNAPVSNDAMEAVLGMVGETPSRVRKMILR
                     SNGIQHRYYAIDPITRQATHSSTELAVQAVKKLGNSATSATCLAVGTSYPDQIMPGQG
                     VMVHGLLDAEPMEVLTTAGVCVAGMAAMKHAYNAVRIGEHRAAIATASETASAIMRSE
                     HFRAEIDHKKLDDARPEIGFEKDFLRWMLSDGAGAVLLANQPNEKGLSLKIHWIDLVS
                     YANEMPVCMYAGAEFIDGNYTGWKAMSEAQRAECSAMAVKQDVKLLNENIVKYTVEKA
                     LERIIPKYKLNAEEIDYFLPHYSSGSFRDKLLEGLQRINFLIPQEKWFTNLTTKGNTG
                     SASIYIMLDEFIRTHDLKQGQKILCYVPESGRFSSCFMLLEAVVNS"
     gene            4206..4421
                     /locus_tag="PXE50_001674"
     CDS             4206..4421
                     /locus_tag="PXE50_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HDL5622577.1"
                     /translation="MDINDIPQDNSKIFNGERKVIYARNPQPEIRQMISSILACYAWD
                     ENNPFVAKSDARLKALAEVVGKAEIGD"
     gene            4702..5193
                     /gene="rplJ"
                     /locus_tag="PXE50_001675"
     CDS             4702..5193
                     /gene="rplJ"
                     /locus_tag="PXE50_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HDL5622578.1"
                     /translation="MALNLQDKQAIVAEVNEAAKGALSAVVADSRGVTVEKMTELRKA
                     AREAGVTMQVVRNTLLRRAVEGTEFECLTDTFTGPTLIAFSNEHPGAAARLFTEFAKT
                     NKEFELKGAAFEGKKQDVAFLATLPTYEEAIARLMGTMKEAAAGKLVRTLAALRDQME
                     AAA"
     gene            5252..5620
                     /gene="rplL"
                     /locus_tag="PXE50_001676"
     CDS             5252..5620
                     /gene="rplL"
                     /locus_tag="PXE50_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HDL5622579.1"
                     /translation="MSLTNEQIIEAIASKSVSEIVELITAMEEKFGVSAAAAVAAAPA
                     AGAAAAEEKTEFDVVLAEAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGISK
                     AEAEALKKELEEAGAKVEIK"
     gene            complement(5727..6557)
                     /locus_tag="PXE50_001677"
     CDS             complement(5727..6557)
                     /locus_tag="PXE50_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDL5622580.1"
                     /translation="MVQKPLNHYLEMQEHFLYVPYLHHHRRIRVLLPKDYHNEGWERY
                     PVLYMHDGQNVFYSKESYSGHSWKIIPTIKSHQELPKMIIVGIDNAGANRLNEYGPWK
                     TTTGSTPETRNAGGLGEEYAKWVVETVKPFIDIHYRTKPQQEHTLLAGSSMGGIITAY
                     MGSRYPHIFGHLGVFSLASWFSEPDFLRFTHQYPLQPNTKVFIQVGTNEGDEIDSHFI
                     SNTNQTYIDCSLNYYQALIRIGVPLDNIRLRIMANEIHHEMHWADHFVEFLHFSLLRK
                     "
     gene            6783..8324
                     /locus_tag="PXE50_001678"
     CDS             6783..8324
                     /locus_tag="PXE50_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjjI family glycine radical enzyme"
                     /protein_id="HDL5622581.1"
                     /translation="MQASLQDILEVVKAKNLTYQQKLMSLGNIAERLFNPIELLGYTE
                     EEWEHIENQMICDLNEGYAIYRPRYILPDYNVYMQKGCQFLDLPPPTNLDEALDGLLI
                     LYSHVPSITTFPVYIGRLDQLLEPFITDEEQDYIKIKRFLNHIDKTISDSFCHANIGP
                     NDTKAGRLILKAVIELENITPNMTIRYDKTKTSREFAELAAKACLLVSKPSFANDAYY
                     IQDLGEEYGIASCYNALPECGGAYTLTRLRLGTIGRACASVEQMVNEMLPKVAKLALS
                     TMDKRHKFLVEESNFFESSFLVQEGFIKRTNFTSMIAIVGLADAVNHLLKQEGLNETF
                     GQSKRGDEIATLIMDKLQAVNDAHKGLYVERTNNQYLLHAQVGANNHAEDKMNTPAHR
                     IRVGEEPTLLAHLKQSAPFHKYFPSGTGDLFAFDQTYTDHLDAVVDIIDGSFAQGYRY
                     ITTYLKNTDLIRVTGYLVKKSEVERYRKGEAVLRDTTWYGSGTDDCAKVFDRQLRDEE
                     NVNAG"
     gene            8327..9115
                     /locus_tag="PXE50_001679"
     CDS             8327..9115
                     /locus_tag="PXE50_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S cluster-binding domain-containing
                     protein"
                     /protein_id="HDL5622582.1"
                     /translation="MAALSEIFVPLHRIIPFSNVEGQGNRTSIFLQGCKLNCLYCHNP
                     ETIPRYSKEAKQVSLQYLYDQVMEAVPFIRGVTISGGEPTIHHKKLVPLFEALREQGL
                     TCYLDSSGFFDFEATEPLINVTDKFLFDLKGDGAGLQTLCFDRKNQAGKVPEQALPNV
                     NHIKPENLARNLQNLAKLLPLDKVEEVRLVYLNEFYNAHHLLEKVADLLKPYPDVLLK
                     IIRVHTKGARDETGLARFVPTIEQTDELAAFAKRHGIQKVITIY"
     gene            9128..10385
                     /locus_tag="PXE50_001680"
                     /pseudo
     CDS             9128..10385
                     /locus_tag="PXE50_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005760733.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
     gene            complement(10464..12473)
                     /locus_tag="PXE50_001681"
     CDS             complement(10464..12473)
                     /locus_tag="PXE50_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HDL5622583.1"
                     /translation="MSAENMPSVIRFEQAVAKKDYESACTELLSILSKLDSNFGGISN
                     IELNMPEQIENLENDKAIYFCTRMAVAITRLFEDPALEISEHGAMRFLTLQRWIALIF
                     ASSPYVNADHILRTYNRNKESANPNTVDLDATLQALIKFCILYLPESNILLNLDAAWN
                     ASSDLTASLCFALQSPRFIGTSSAFAKRAAILQWFPEKLAQIENLNKLPSAISHDVYM
                     HCSYDIEANKHNVKRSLNAVIRRHLLSVGWEDRKIEQLGTRNNKPVMVVLLEHFHSSH
                     SIYRTHSTSMVAAREHFHLIGLGSDAVDEMGQQVFDEFHLLPQDGSLFDRLSFLKDIC
                     DKNNPAVFYMPSIGMDLTTIFASNTRLAPIQAVALGHPATTHSDFIEYVIVEDDYVGS
                     ESCFSEQLLRLPKDALPYVPSALAPQNVVYNLRENPEVIHIGIASTTMKLNPYFLEAL
                     KAIRDRAKVKTHFHFALGQSSGITHPYVERFIKSYLGNDATAHPHSPYDEYLNILHNC
                     DMMLNPFPFGNTNGIIDMVTLGLVGVCKTGPEVHEHIDEGLFKRLGLPNWLITQTAEE
                     YVTQAIRLAENHEERLAIRRDIIENNKLQTLFSGDPRPMGQIFLAKVQAWLADKNSKN
                     AEVEVKTKKVRKAATASQSAKKQTTSKTQTAKAEKDNTAKTETKS"
     gene            complement(12483..13820)
                     /gene="rimO"
                     /locus_tag="PXE50_001682"
     CDS             complement(12483..13820)
                     /gene="rimO"
                     /locus_tag="PXE50_001682"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HDL5622584.1"
                     /translation="MSASPNIGFISLGCPKNLVDSERILTELRADGYNIIPSYENADL
                     VIVNTCGFIDSAVQESLESIGEALEANGKVIVTGCLGAKENQIREVHPKVLEITGPHS
                     YEAVMNHVHKYVPKPEFNPYTSLVPKQGIKLTPKHYAYLKISEGCDHRCTFCIIPSMR
                     GDLASRSIVQVLDEAKRLVDAGVKELLIVSQDTSAYSLDRKKEEATKTVFWNGMPIKS
                     NLITLCEQLGSMGVWVRLHYVYPYPHVDDLIPLMAAGKILPYLDIPLQHASPKILKAM
                     KRPGSIERTLERIKKWREICPELTLRSTFIVGFPGETEEDFQLLLDFLKEAQLDRVGC
                     FKFSPVEGAVATDMPDQVPEEVKEERFHRFMQLQQEISAARLQAKIGKTVQVIIDDID
                     EEGIIGRSMADAPEIDGVVYVDNPSNQLVTVGQIISVTITHADEYDLWGILNN"
     gene            complement(13975..14667)
                     /gene="mtnN"
                     /locus_tag="PXE50_001683"
     CDS             complement(13975..14667)
                     /gene="mtnN"
                     /locus_tag="PXE50_001683"
                     /EC_number="3.2.2.16"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/S-adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HDL5622585.1"
                     /translation="MKIGIIGAMAQEIEILRQVMVEPKVTELAGCKIFEGKINNTRVA
                     LLQSGIGKVAAAIGTTLLIQLTQPDMIINTGSAGGLDPDLNVGDILISTEVRYHDVDV
                     TAFGYEIGQLPANPPTFSPNEQLVELAQKEAKKAGYNVVSGLICSGDAFINGNDKINQ
                     IRQNFPNVVAVEMEAAAIAQVCHGFNLPFVIVRAVSDVADKESHLSFEEFLPLAAEKS
                     STIVLAMLNNID"
     gene            complement(14725..14946)
                     /locus_tag="PXE50_001684"
     CDS             complement(14725..14946)
                     /locus_tag="PXE50_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SlyX family protein"
                     /protein_id="HDL5622586.1"
                     /translation="MDNNYTLSAKITELETKVAFQELIIEELNQALIEQQFAIDKLQT
                     QIRHIAEKLKGAQLSQVASQAEETPPPHY"
BASE COUNT         4288 a         3091 c         3338 g         4243 t
ORIGIN      
        1 atattagatc ggagtaaaga attatctcgt agaatattaa aaagtttaga acaaaaaaat
       61 attctcactt ggcacggctt aagtccaaaa gatccaaccc aatactacac actcaagaga
      121 tagtaggaaa tataagatga ataatacagt tctcatcacc ggctcaagcc gtggtatcgg
      181 taaagcgatt gctttaaccc ttgcacaaca agggtttgat attgtggtac attgccgttc
      241 tcgtgtggaa gaagcggaag cggtggcaca agcggtcaga aatctcggaa aaaatgccag
      301 agtgttacag tttgatgtgg cggatcgtga aaaagtgcgg tcgattttag aggcagatgt
      361 ggaacaacat ggtgcctatt acggcgtggt gctaaatgca gggcttaccc gtgataacgc
      421 ctttcctgct ttaaccgatg aggattggga tagcgtgttg cgtaccaatt tagacggttt
      481 ttataatgtc ctgcacccga ttatgatgcc gatgatccgt cgccgtaaag caggcaggat
      541 tgtctgtatc acctcggttt ccggcttgat cggcaaccgt gggcaggtca attacagcgc
      601 ttcaaaagcc ggcattattg gtgcggcaaa agcactcgcc atcgagcttg ccaaacgtaa
      661 aatcacggta aactgcgtgg cgcccggctt gattgatacc gatattctgg acgaaaacgt
      721 cccaatcgaa gaaattctca aaatgatccc cgcaggacga atgggcgatc ctgatgaagt
      781 ggcacacgcc gttgcgtttt taatggatga aaaagccact tacatcacac gccaagtcat
      841 cgctgtgaat ggtgggttgt gttaacttta ggataataat tcgtaggggc ggatccagta
      901 cccgcccgaa gccaaaaaga gataaatatg aaacgagtcg tcatcaccgg aattggtgtg
      961 gttaccgctt ttggtaaaga gtgggcggaa attcacggct atcaaccgcc gaaacattgg
     1021 aaccgcaagc agttgcgcag ccttgggcga gtgtcgcaat ttgtggtgga ggccagcgag
     1081 cgggctttag cacaggccgg tttgttggac gaaaacggcg tgattttcga ctggctaaaa
     1141 gacaggcgaa tgggcgtggc gtgtggctcg tccacaggct ctaccaatga catcaaagat
     1201 gccgccgaat tgctgatgac cggcaaatcg gacggtttca atgccaacac ctatgtgcga
     1261 atgatgcccc acaccaccgc tgccaatatt ggcattttct tcgggctgac agggcggatt
     1321 atcccgactt ccagcgcttg ctcctcgggc agccaaggta tcggttacgc ttacgaagcc
     1381 attaaatacg gtatgatccc gatgatgctt gccggcggtg gagaagaatt ttgtgcctcc
     1441 aaagtctatg tcttcgacag cctctatgct gccagccgcc gcaacgacaa cccaaaaggc
     1501 acgccacgcc cctatgacaa agaccgagac ggcttagtga tcggcgaggg agcgggaatg
     1561 ttcgtattgg aagagctgga acacgcgtta gcacgagggg caaacattat cgccgaagtg
     1621 gtgggctacg gtgcaaacag tgacggttcc cacgtcaccc gcccacaagc caccacaatg
     1681 caacgctgta tggaacttgc ccttaaagat gccggtattc aaccgaacca agtcggctat
     1741 gtaaacggac acggcacggc caccgagcag ggcgacattg ccgaaactca agccaccaca
     1801 gcggtgttcg gcaaaattcc gctcagctcg caaaaaagct acttagggca tacgctcggt
     1861 gcgtgtggtg cattggaaag ctggttcagc attgaaatga tgcgagacgg ctggttcgcc
     1921 ccaacactga atttagaaaa tgtcgatgaa cgctgtggcg acttggatta ccttcaaggt
     1981 gacggacggg aaatccacac cgattatgtg atgaacaaca atttcgcctt cggcggtgtg
     2041 aatacctcat tgatttttaa acgttggaaa taaccgtttt caaataatga aaaagatatt
     2101 attagtttat tactcccaaa ccgggcaact cacccatttg gcagaaaatt ttgtacaatc
     2161 gcttgaacaa gcgggcgttt ttgtggaaaa actcgcaatc aaaccgcaac aggaataccc
     2221 gtttccgtgg cggtttatgc gtttttttaa caccttcccc gaaaccgtcc acctcacacc
     2281 gccgccgatt gagcctctgc cctttcagca cgaaatatac gatttggtga tcatcgccta
     2341 ttccgtgtgg tttctctccc ccagccagcc gattaccgct tttttacaga gtgaacaggc
     2401 aaaaaagtgt tgaaggatac gcccgtcatc acgctgatcg gctgtcgcaa tatgtggctg
     2461 atggcgcagg aaaaagtgaa aaaactgctt gccgagagtg aggcgaagct cattggcaac
     2521 gtggtcaaag tggatcaatc taacgactgg gcgagtttta tcaccacacc gctttggatg
     2581 ctgaccggca agaaaaaaaa tcggcaagct gccgagcgct ggcattgccg aaagcgaaat
     2641 ggaagatgta aaacgcttcg gggcaaaact tttgcacatt tttagccaaa accaaccgct
     2701 tgacagcacc cttttccgcc aaatgcaagc ggtcaaaatt gacgaaaaat tgatgatgag
     2761 cgaaaaagtc ggtgcgagaa gtttccacct ttggggcaaa ttactgatca agtgcggtca
     2821 aatttcaccg cacttacgcc aagcggtact ctatttttac atcctctttt tagtgacgtt
     2881 aattttaacc gtcgtcccga tttcaacggt gattaaacgg ctattacgcc cactgctgaa
     2941 agaaaaatta gaaaaacaaa aacggtattt tgccgagcct tcgggcgagt aaacgtaccc
     3001 tacacggaaa ctttatgcta tctaacgtct atatcaccaa cacctccgcc tttttaccca
     3061 acgcccctgt gtccaacgat gcaatggaag cggtgttggg aatggtgggg gaaacgcctt
     3121 cccgagtgcg gaagatgatt ttgcgttcta acggtattca acatcgttat tatgccattg
     3181 acccgataac ccgccaagcg actcacagca gtaccgagtt ggcggtgcaa gcggtcaaaa
     3241 aattgggaaa ttctgcaaca tcagcgactt gcttggcggt ggggacatct taccccgacc
     3301 aaattatgcc ggggcagggg gtgatggtac acggcttgct tgatgccgaa ccgatggaag
     3361 tgctgaccac tgccggtgtg tgcgtggcgg gaatggcagc gatgaagcac gcctataatg
     3421 ccgtacgcat cggtgagcat cgtgctgcga ttgcaacggc ttccgaaacc gcctccgcca
     3481 ttatgcgcag tgaacatttc cgtgccgaaa tcgatcataa aaaactggac gatgctcgcc
     3541 ctgagatcgg ttttgagaaa gatttcctgc gttggatgct ctcagacggt gcaggggcgg
     3601 tattgcttgc caatcagccg aacgaaaaag ggttgagcct caaaattcac tggatcgatc
     3661 tggtctctta cgctaacgaa atgccggttt gtatgtacgc cggtgcggaa tttattgacg
     3721 gcaactacac cggctggaaa gcaatgagcg aagcccaacg tgccgaatgc tcggcaatgg
     3781 cggtgaaaca agatgtcaaa ctgctcaacg aaaacatcgt caaatacacg gtggaaaaag
     3841 cattggagcg gattatcccg aaatacaagc tcaacgctga agagattgac tacttcctgc
     3901 cgcactactc gtccggttcc ttccgagata aattattgga aggtttacag cggatcaatt
     3961 tcctgatccc acaggaaaaa tggttcacca acctgactac caaaggcaac actgggtcag
     4021 cctcgatcta cattatgctc gatgaattta tccgcaccca cgatctcaaa cagggacaaa
     4081 aaatcctctg ctatgtgccg gaaagcggac gtttttcgtc ttgttttatg cttttggaag
     4141 cggtggtaaa ttcgtaaaat cgtagggacg ggggctattc ccgtccaaca atcatcggaa
     4201 aacgtatgga catcaatgac attccccaag acaacagcaa aatcttcaac ggcgaacgca
     4261 aagtgatcta cgcccgcaat ccgcaaccag aaatccgcca aatgatctcc tctattctcg
     4321 cttgctacgc ttgggacgaa aacaacccgt ttgtagcgaa gtctgatgca cggttgaagg
     4381 cattggcgga agttgttggt aaagcagaaa ttggcgatta agtttgattt tgtgctttac
     4441 agggtcgcag attatctgta taatttgcga ccttaacttg cgagagcaag ctgatggtgc
     4501 ttagcctatc taagccccgt ctaagactgt aggggtgaaa acttaataat cctacataga
     4561 tggtgaacag acagaattct ctgcttctgg acaccttagg ctcaaagaag attgcagttt
     4621 gtagcaatgc aagcggtaat atttttggga ttttttgtaa attctgcttg aaaaggcaga
     4681 gtgtatcagg agctaaaacc aatggcatta aatcttcaag acaaacaagc gattgttgct
     4741 gaagtaaacg aagctgccaa aggtgcactt tcagctgttg ttgcggattc tcgcggtgta
     4801 acagttgaaa aaatgactga gttacgtaaa gcagctcgtg aagctggtgt gacaatgcaa
     4861 gttgtacgta atactttatt acgtcgtgca gtggaaggca ccgagttcga gtgcttaaca
     4921 gatacgttta ccggtccaac tcttatcgca ttctcaaatg aacacccagg tgcagcagca
     4981 cgtttattca ctgaatttgc gaaaacaaac aaagagtttg aacttaaagg tgcagccttt
     5041 gaaggtaaaa aacaagatgt tgcattctta gcaaccttac caacttacga agaagcaatt
     5101 gcacgtttaa tgggcacaat gaaagaagct gcggcaggca aacttgttcg cactcttgca
     5161 gcattacgcg atcaaatgga agcagcagct taattttaag cactcttctt tattcgttta
     5221 acaacttatt ttactttagg aatcgattgt tatgtcatta actaacgaac aaatcattga
     5281 agcgattgct tctaaatcag tatcagaaat cgttgaatta atcactgcga tggaagaaaa
     5341 attcggtgtt tcagcagcgg cagcagtagc agcagctcca gcagcaggcg cagcggcagc
     5401 agaagagaaa actgagtttg atgtagtatt agcagaagct ggtgcaaaca aagttgctgt
     5461 aatcaaagca gtacgtggtg caacaggttt aggcttaaaa gaagctaaag acttagtaga
     5521 atcagctcca gctgcattaa aagaaggcat ctctaaagca gaagctgaag cacttaagaa
     5581 agaattagaa gaagctggcg cgaaagtaga aatcaaataa tttttgattt attttgtcag
     5641 aacttcaagt tcaacaaacc ccgatggaaa catcggggtt ttgttttttc agaattgtgt
     5701 aatgtagata tgattacctt tatccattac ttgcgcagca gtgaaaaatg taaaaattcc
     5761 acaaagtgat ctgcccagtg catttcgtgg tggatttcat ttgccataat ccgcaggcgg
     5821 atattgtcta acggcacgcc aatccgaatc agtgcttggt agtaattgag cgaacaatca
     5881 atataggttt ggttcgtatt agagataaag tgcgaatcga tttcatcgcc ttcgttagtg
     5941 ccaacctgaa taaacacttt ggtattgggt tgtaacggat attggtgcgt aaaacgcaga
     6001 aaatccggct cactaaacca agaggcaagc gaaaacaccc ctaaatgccc gaaaatatgt
     6061 gggtagcggc tgcccatata agcggtgata atgccaccca ttgaactgcc tgccaataag
     6121 gtatgttctt gctgaggctt ggtgcgatag tgaatatcaa taaagggttt aaccgtttcc
     6181 accacccatt tggcatattc ctcccctaag cctccggcat ttcgggtttc aggggttgag
     6241 ccggtggttg ttttccacgg gccgtattca tttaagcgat tagctcctgc gttatcaatg
     6301 ccgacaataa tcatcttcgg taattcttgg tgtgatttaa tggttggaat aattttccaa
     6361 gaatgccccg aataagactc tttgctgtaa aacacatttt gcccgtcgtg catatataac
     6421 accggataac gttcccaacc ttcgttgtga taatccttcg gcaatagtac ccgaatgcgg
     6481 cggtgatggt gtaaataggg aacatataaa aaatgctcct gcatttctaa atagtggtta
     6541 agtggttttt gtaccatcag tctgtccttt tgcttaaatt gtggcgtatt ttacacctta
     6601 atcagtctga gttaaaacaa gcggtcagaa aaagtcaaaa atttgcaaat tgctgttacc
     6661 taacgcaatc ggttgcctta tgcttttgag gaatataaaa gagaaactgt gatctaagtc
     6721 acagcaattt ttattcggtt tgactaaaat ccgaactatc acttaataga gaggaaaatg
     6781 ttatgcaggc ttcattacaa gatattcttg aggtagtaaa agcaaaaaat ctcacttatc
     6841 agcaaaaatt gatgagttta ggcaatattg ctgagcggtt atttaacccg attgaactac
     6901 ttggctacac tgaagaagag tgggaacaca ttgaaaatca gatgatttgc gatttaaatg
     6961 aaggttatgc gatttatcgc ccacgttata ttttgcctga ttataatgtg tatatgcaaa
     7021 aaggttgcca attcttagat ttacctccgc caaccaattt agatgaagcc ttagacggct
     7081 tgttaattct gtattcacac gttccgtcca ttactacttt tccggtgtat atcgggcgtt
     7141 tagaccaact gttagaaccg tttataaccg atgaagagca agattacatt aaaatcaagc
     7201 gtttcttaaa tcatatcgat aaaaccattt ccgattcttt ctgccacgct aacatcgggc
     7261 cgaatgacac caaagccggt cgtttaatct taaaagcggt gattgagctt gaaaacatta
     7321 caccgaatat gacgattcgt tatgataaaa ccaaaacatc gcgtgaattt gccgaactgg
     7381 cggcgaaagc gtgcttgttg gtgtccaaac cgtcttttgc taatgatgcc tactacattc
     7441 aagatttagg cgaagaatac ggaattgcaa gctgttataa cgccttaccg gaatgtggcg
     7501 gtgcttacac tctgacccgc ctgcgtttag gtactatcgg gcgtgcttgt gcgagtgttg
     7561 aacaaatggt caatgagatg ctgccgaaag tggcaaaact cgccctttcc acgatggata
     7621 aacggcataa attcttggtg gaagaaagca atttctttga aagtagcttc ttggttcagg
     7681 agggctttat caaacgtact aacttcacaa gtatgattgc gattgtaggt cttgctgatg
     7741 cggtgaatca tttactcaag caagaaggtt taaatgaaac ctttgggcaa agcaaacgtg
     7801 gcgatgaaat tgcgacgctg attatggata agctccaagc agtaaatgac gctcataaag
     7861 ggctgtatgt tgaacgaacc aataaccaat atctgttaca cgctcaagtg ggggcaaata
     7921 accacgctga agacaaaatg aacacgccgg cacaccgcat tcgtgtgggc gaagagccaa
     7981 ccttattggc acacttaaaa cagtctgctc ctttccataa atatttccca tccggtacgg
     8041 gggatttatt cgcctttgac caaacctaca ctgatcattt agatgcggtg gtggatatta
     8101 ttgacggctc gttcgcccaa ggttatcgct acattaccac ttacctgaaa aatactgatt
     8161 tgattcgagt gacaggctac ttggtgaaaa aaagcgaggt tgaacgttat cgcaaaggcg
     8221 aagcggtatt gcgtgatacc acttggtatg gttcaggcac cgatgattgt gcgaaagtgt
     8281 tcgaccgcca gctgcgtgat gaagaaaatg tgaatgcagg gtaacaatgg ctgcactttc
     8341 tgagattttt gtgccgttac accgcattat ccccttctcg aatgtagaag ggcagggcaa
     8401 tcgtaccagc atttttctac aaggttgcaa gctgaattgc ctgtattgcc ataacccgga
     8461 aaccattcca cgttatagca aggaagcaaa acaggttagc ttgcaatact tgtacgatca
     8521 agtgatggag gcagttccct ttattcgagg agtcactatt tcgggtggag agccaaccat
     8581 tcatcataaa aaattagtgc cactgttcga ggcgttgcgt gagcaagggc taacctgtta
     8641 tttagacagc agcggctttt ttgattttga ggcaacagag ccgttaatta atgttaccga
     8701 taaatttctg ttcgatctca aaggagatgg ggcgggctta caaacgctat gctttgatcg
     8761 gaaaaaccaa gccggcaaag tgcctgaaca ggctcttcca aacgtgaatc atattaaacc
     8821 tgaaaacttg gctcgcaatt tgcaaaattt agccaaatta ttaccgcttg ataaggtgga
     8881 agaagtacgt ttggtttacc tcaatgagtt ttataacgcc caccatttgc tcgaaaaagt
     8941 ggctgaccta cttaaacctt acccagatgt actacttaaa attattcggg tacacaccaa
     9001 aggagcgaga gatgaaacag gcttggctcg ttttgtaccc actatcgagc aaaccgatga
     9061 actggcagca tttgcaaaac ggcacggtat tcaaaaagtt attactattt actaatggag
     9121 acttacgatg gatatactaa ttagcataat tggtgttttt gtgttattag gcttaggtgt
     9181 tttattatca aataatcgca aagccattaa atttcgcaca attttgggcg ctttggcgat
     9241 tcaaattggt tttgccgctc ttattcttta ctttccagcg ggaagaaatg cattgctagc
     9301 tactgcaaat tgtgtgagca atattattaa ttatggtaac gaaggtatta gctttgtgtt
     9361 tggcaattta gcgaatccga gtaatagcag cattggtttt gtgtttgcgg ttaaagtatt
     9421 gcctattatt atcttcttct ctgcgttaat ttcaatgctt tactaccttg gtgtgatgca
     9481 atgggtgatt aaaattattg gtggagcatt acaaaaaaca ctaggcactt ccaaggcaga
     9541 atcaatgtca gcggcagcta attatttttg ttggtcagac agaagctcct ctagttgtaa
     9601 aaccatacat tagccgtatg acagagtcag aattatttgc cattatggtt ggtggaactg
     9661 cttcaattgc tggttccgtt atggctggtt atgccggaat gggcgttcct ttaacttatc
     9721 ttattgcggc ctcctttatg gctgcaccag ctgggttact atttgctaaa ttaatgtatc
     9781 ctcaaacgga aaccttggag agtaaagcag atgacaatgt tgaagttgaa aagccaaata
     9841 acgtggttga ggccctagct aatggtgcta gtgcaggtgt tactttggct attaatgtcg
     9901 gtgctatgtt aatagcattt attgcagtga tcgctttatt aaatggcttt attggtggca
     9961 ttggtaattg gtttggttat gaggggctaa ccttacaaat tttattaggt tatttattcc
    10021 aaccacttgc tttcttaatc ggtgtgccgt ggcaagatgc cgatattgca ggtcaaatga
    10081 taggtatgaa acttgctgtt aatgaatttg tcggatatct tgagtttgct aaatatctac
    10141 agcctgatgc tgtggtgcaa ttaagcgata aaactaaggc aataattact tttgctttat
    10201 gtggttttgc aaactttaga gcaattgcgg tattgattag tggtatcgga agtatggcac
    10261 caagtcggcg ttcagatatt gctcgtttag gtttaaaagc agtgattggc ggcacattgg
    10321 cgaacttaat gagtgcaact atagcgggtt tctttattgg tttaagtggt gccacattag
    10381 gttgatacaa gcggttaaat tgactcactt ttttgcaaaa agcccaagta agttaaatga
    10441 ctacttgggc tttgtttaat gaactagctc ttagtttcgg tttttgctgt gttatccttt
    10501 tccgctttgg ctgtctgtgt tttcgaagtt gtctgttttt ttgcggattg gctagcagta
    10561 gctgcttttc ttactttctt tgttttaact tctacttccg catttttaga gtttttatcc
    10621 gctaaccatg cctgcacttt agctaagaat atttgtccca tcgggcgagg atcgccagaa
    10681 aataatgttt gtaatttatt attttcaata atgtcgcgtc taattgctaa gcgttcttcg
    10741 tggttttccg ctaaacgaat agcttgagta acgtattcct ctgctgtttg ggtaattaac
    10801 caattaggta gcccgaggcg cttaaataaa ccttcatcaa tatgttcatg aacttcaggg
    10861 cctgttttac agacaccaac taaaccaagc gtaaccatat cgataatgcc gtttgtattt
    10921 ccaaatggga atggatttag catcatatcg caattatgta gaatatttag atattcatca
    10981 tatggcgaat gtgggtgtgc ggttgcatca tttcctaaat agcttttgat aaaacgttcc
    11041 acataaggat gcgtaattcc actagattgc cctaatgcaa aatggaaatg agtttttacc
    11101 ttcgccctat cacgaatggc ttttaatgcc tctaagaaat atgggtttaa tttcatagtg
    11161 gttgatgcaa ttccgatatg gataacctct ggattttcac gtaggttata gaccacattt
    11221 tgaggcgcta atgcggaagg cacatagggt agcgcatctt ttggaagacg taataattgt
    11281 tcactaaagc agctttcgga accaacatag tcatcttcta cgatgacata ttcaataaaa
    11341 tcagagtgtg tagttgccgg atgacctagc gcaacagctt gaattggtgc taggcgagtg
    11401 ttactagcga aaatagtggt taaatccatt ccaatgctag gcatatagaa tacggctgga
    11461 ttatttttat cacagatatc ttttaaaaag cttaagcggt caaatagtga gccatcttgt
    11521 ggtaataaat gaaattcgtc gaatacctgt tgccccattt catctacagc atcactgcct
    11581 agcccaataa gatggaaatg ttcgcgtgca gcaaccattg aggttgaatg agtacgataa
    11641 atagaatgtg atgaatggaa atgctccaat aatactacca tgacaggttt attatttctg
    11701 gtaccaagct gttcaatttt tctatcttcc caaccgacag aaagtaaatg acgacgaatt
    11761 acagcattta acgaccgttt tacattatgt ttatttgctt caatatcata actgcaatgc
    11821 atataaacat cgtgtgaaat ggcgctcggt agcttgttca agttttcaat ttgcgctaat
    11881 ttttctggga accattgcaa aatagccgcg cgttttgcaa aagcagagga tgtaccaata
    11941 aatctaggtg attggagtgc aaaacaaagt gatgcggtga gatctgatga agcattccat
    12001 gcagcatcta gattcaataa aatattagat tccggtaagt ataaaataca gaacttaatt
    12061 agtgcttgta atgtggcatc taaatcaacc gtatttggat tagcagattc tttatttcta
    12121 ttgtaagtac gcaagatatg gtctgcgttt acgtatggag aactggcaaa aattaatgct
    12181 atccagcgtt gtaatgtcag aaaacgcata gcaccgtgtt cggagatctc taatgcagga
    12241 tcttcaaaca agcgagtaat cgctaccgcc attcgagtac agaaatagat agctttatca
    12301 ttttctaaat tttcaatctg ctctggcata ttcaattcaa tattggaaat gccaccaaaa
    12361 ttactatcta attttgaaag gatagacagt agctcggtac aagccgattc ataatctttt
    12421 ttcgcgaccg cctgctcaaa acggatgacg ctaggcatat tttctgctga cataatgtat
    12481 ccttagttgt ttaaaattcc ccacagatca tactcatctg catgtgtaat ggttactgaa
    12541 ataatttgcc ctactgtcac taattggttt gaaggattat ctacatagac tacaccgtca
    12601 atttccggtg catctgccat tgagcgaccg ataatgcctt cttcgtcaat gtcatcaata
    12661 attacttgta cggttttgcc gatttttgct tgtaagcgag cagcggaaat ttcttgttgt
    12721 agttgcataa aacggtggaa acgttcctct tttacttctt ccggaacttg atccggcata
    12781 tcggtagcaa cagcaccttc cactgggctg aatttaaagc aaccaacacg atctaattgt
    12841 gcttctttta agaaatcgag taatagttgg aaatcttctt ctgtttcccc cgggaagccg
    12901 acaataaagg tagaacgcag agttaattca gggcaaattt cacgccattt tttaatgcgt
    12961 tctaaggttc tttcgattga acccgggcgt ttcatcgctt ttaagatttt cgggctggcg
    13021 tgttggagtg gaatatccaa atacggcaaa attttgccgg cagccataag cggaattaaa
    13081 tcatctacgt gtgggtatgg gtaaacatag tgcaaacgca cccacacgcc cattgagcct
    13141 aattgctcac atagcgtaat taaattactt ttaatcggca taccgttcca gaaaacggtt
    13201 ttggttgctt cttctttttt gcgatctaac gaataggctg aggtgtcttg tgagacgatt
    13261 aacagctctt ttaccccggc atcaactagg cgttttgctt catctaatac ttgcacgata
    13321 gaacggcttg ctaaatcgcc acgcattgaa ggaataatgc agaaagtgca gcgatgatcg
    13381 cagccttcgg aaattttcaa ataagcgtaa tgcttcggtg ttaatttaat cccttgtttt
    13441 ggcactaagc tggtgtaagg gttaaattcc ggttttggca catatttatg gacgtggttc
    13501 attaccgcct catagctatg tggccctgta atttccaata ctttagggtg tacctcacga
    13561 atttggtttt cttttgcccc taaacagccg gtgacaatta cttttccgtt agcttctaac
    13621 gcttcaccaa tgctttcaag agattcttgt actgcggaat caataaaacc gcaggtgttt
    13681 acaatcacaa gatccgcatt ttcataacta gggatgatgt tataaccatc cgcacgcagt
    13741 tcggtcaaaa tacgttcgga atcaactaaa tttttagggc agcctaagct gataaaacca
    13801 atatttggtg aagcactcat ataactctca ataactaaaa agaaaaatgc ctacaatttt
    13861 tgtctgtagg caaaaaacta acaagattct acaaaatctt gcccaaaata gcgataacaa
    13921 gcggtcaatt tttaataaac atttacaaac ttgaaatttc gctaacaatt aaaattaatc
    13981 gatattattt agcattgcta atacaatcgt ggaagatttt tctgcggcta atggcagaaa
    14041 ttcttcaaaa gaaaggtggg attctttgtc cgctacatcc gatactgctc ttacgattac
    14101 aaatggaagg ttaaaaccgt gacaaacctg cgcaatggct gctgcttcca tttcgactgc
    14161 aacgacattc gggaaattct gacgaatttg attaatctta tcattaccgt taataaaggc
    14221 atcgccgcta cagattaagc ctgaaaccac attgtaaccg gcttttttcg cttccttttg
    14281 agctaattcg actaattgct cgtttggcga aaatgttggc gggtttgccg gtagttgccc
    14341 gatttcataa ccaaaggcgg tcacatcaac atcgtgataa cgaacttcgg ttgaaatcaa
    14401 aatatcacct acgtttaaat ctggatctaa tccaccggca gagcctgtat taataatcat
    14461 atccggctgg gtgagctgta tcagtaaggt agtgccgatg gcggcagcaa ctttgccgat
    14521 acccgattgt aataatgcca cacgggtatt gttaattttg ccttcaaaaa ttttacaacc
    14581 tgctaattca gtgactttag gttcaaccat tacttggcgt aaaatctcaa tttcttgtgc
    14641 catcgcacca ataataccaa ttttcattac tttccttctc taatgtattg tttatttttt
    14701 gaaaaaaacg ctattttaac agcattaata gtgaggaggg ggtgtttctt ctgcttgtga
    14761 agcaacttgg cttagttgag cccctttcaa tttctcagca atatggcgaa tctgagtttg
    14821 taacttatca attgcaaatt gttgctcaat aagtgcttga tttaactctt caataatcag
    14881 ctcttggaaa gcaactttag tctccaattc ggtaattttt gccgataatg tataattatt
    14941 atccattttt tactaaaaaa
//
LOCUS       DANLZQ010000066        14840 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.066, whole genome shotgun sequence.
ACCESSION   DANLZQ010000066 DANLZQ010000000
VERSION     DANLZQ010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 14840)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14840)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14840
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.066"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(73..657)
                     /locus_tag="PXE50_001685"
     CDS             complement(73..657)
                     /locus_tag="PXE50_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfoxide reductase heme-binding subunit YedZ"
                     /protein_id="HDL5622587.1"
                     /translation="MLTWLRILIHLGCLLPLVWVAQLLYTGNETILGADPIKELEHFL
                     GYGAIVIFCIMFLLGIALQYLKKNQYQILRRPLGLWAFVWAALHISSYLLLELSLDVK
                     LFFSELAGRPYLILGAAAFFILSIMAITSLPMLKRKLGTRWGTIHQWAYPALVLAMVH
                     YYWSVKSVTFDPIIIGVLVLFIVAHKIQAKFAKK"
     gene            complement(657..1610)
                     /gene="msrP"
                     /locus_tag="PXE50_001686"
     CDS             complement(657..1610)
                     /gene="msrP"
                     /locus_tag="PXE50_001686"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HDL5622588.1"
                     /translation="MKKLTIQDVTPETIFYQRRKIITALGLGIAASALPKVSMAETQR
                     HLQSLQFKPDPNKGLELTPENKVIGYNNFYEFGVDKSAPAKNAANFKTDPWTLEIGGE
                     VENPFSLNHQQLLNTFPLEERIYRFRCVEAWSMVVPWIGFELARLIEMAKPTSKAKYV
                     VFHTLYDPAQMPGQKNRLLGGGIDYPYVEALRLDEALNSLTLLSVGLYGKTLPPQNGA
                     PIRLVVPWKYGFKSIKSIVKITFAEKRPLTTWESLAPNEYGFYANVNPNVDHPRWSQA
                     SERVIGAGGLLSVKRQPTLMFNGYENEVANLYRGLDLKVNY"
     gene            1719..2285
                     /locus_tag="PXE50_001687"
     CDS             1719..2285
                     /locus_tag="PXE50_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HDL5622589.1"
                     /translation="MKSLSSTQIEEIRKQMVKFATLQLADKDLAEDVVQDALTNAYKH
                     SASFRREAALKTWIFAILKNKILDLLRTRKRHIPVSSLCEEEESPSAFFDRHDHWLEH
                     QDVTEWRGVAQSTYQKEFWAIFDICLNKLPAQQARVFMMREHLEMSSAEICQECEISL
                     SNLNVLLHRARLRLQECLSRNWFREESK"
     gene            2282..2467
                     /locus_tag="PXE50_001688"
     CDS             2282..2467
                     /locus_tag="PXE50_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HDL5622590.1"
                     /translation="MKCRQATELISQSCDEKLRLQQHMRLQLHLLVCPKCRNFNKNTK
                     KLGKILRAYCNDKDAPF"
     gene            2497..2781
                     /locus_tag="PXE50_001689"
     CDS             2497..2781
                     /locus_tag="PXE50_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622591.1"
                     /translation="MRYWLISLSILLSGCVVPVTPTGQAGIPMPIIIGVSDPLDSKEV
                     HICTLKPFTQEYRSEHSSRGRAKLNVQKQCRANHSEMFCEEKDIVCKTYD"
     gene            2885..3928
                     /locus_tag="PXE50_001690"
     CDS             2885..3928
                     /locus_tag="PXE50_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDL5622592.1"
                     /translation="MQPINIAIAGAGFSSRVFHIPFLKQDARFNIVKVYERTSNNAAE
                     WLPNAETVRDFNALLTPEVDLVLITTPNQTHYAMVKESLLAGKHVLVEKPLVATVAEA
                     EELAELAKRQGKVLYVYQNRRWDSHIATAKSLMEQNLLGELVDCEIRFDRYAKEKNVK
                     VWKESGELGTGLVYDLGVHLIDQALYLFGKPEAVYADVRYQHEGALVDDNFDIQLYYA
                     NGFKVVLKASRYAREPSPTFVLHGKLGSYLKQTPDNQEDLLKNGVQPIGKDWNIEEKE
                     NWGILHTEVEGNVVRQPYRNAEVSYQNLFDDLYQAIAHNAEPIIKLEDVIFVLKVIES
                     VFESAKLGQKIYL"
     gene            4168..5274
                     /locus_tag="PXE50_001691"
     CDS             4168..5274
                     /locus_tag="PXE50_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005647785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HDL5622593.1"
                     /translation="MNKLIASLVASSCATAFAAPVQQNNFHTTTHTYEFTQSYDLVVP
                     QGSKGTTNLWIPLPSDTDYQTVKSIEFEGSYKNAYITENNAYGAKTLFATWDTDAPKR
                     DLKVKMVIQTQDREPMAQGALANYQMPEKITYSVDVLEYLKPTAHIKTDGIVKEYADK
                     IVGNEQNPLKKAELIHKWIVDNMERDNSVLGCGDGDVEKILTTKVLKGKCTDINSVFV
                     ALARASNIPAREVFGIRLGQAVKMGQYSKTAFGSSKDGVANESGGQHCRAEFYLAGFG
                     WVPVDSADVAKMRLAEKKDVDDADVQAVSKYLFGNWEMNWVGFNHGRDFDLYPQPELT
                     PLNNFGYPYAEVGGDPLNSFEAKEFGYEFISKEL"
     gene            5249..5617
                     /locus_tag="PXE50_001692"
     CDS             5249..5617
                     /locus_tag="PXE50_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622594.1"
                     /translation="MNSSLKSYNHKFITMCVTAIVSAVTSTFCCIGPLVYLVFGISSP
                     WLMELNQLEFLQLPMLLISLAAFGYGFWLLNFSNKIICTKYFSRRTLVILYWVVSVVV
                     MFFLTYPYVLPYILEMWSGE"
     gene            5619..5927
                     /locus_tag="PXE50_001693"
     CDS             5619..5927
                     /locus_tag="PXE50_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HDL5622595.1"
                     /translation="MKKYIATMLLAFGLVHSSYAQEKTAQIETKQAEKTVVLHIPEMY
                     CQLCVYLVNKELRAVEGVISTKASMKERKATVVVKESVDNQALIQAVGNLKYTAKVIE
                     "
     gene            6165..6719
                     /gene="srlA"
                     /locus_tag="PXE50_001694"
     CDS             6165..6719
                     /gene="srlA"
                     /locus_tag="PXE50_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005725059.1"
                     /note="catalyzes the phosphorylation of incoming sugar
                     substrates along with their translocation across the cell
                     membrane; the IIC domain forms the PTS system
                     translocation channel and contains the specific
                     substrate-binding site; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIC"
                     /protein_id="HDL5622596.1"
                     /translation="MIEAITHGAEWFIGLFQKGGETLVGMINGILPLLISLLVVMNAL
                     IKFVGQDRIERLAQRSAGNPISRYLILPVIGTFVFCNPMTLSLGRFLPERYKPSYYAA
                     ASYSCHSMNGLFPHINPGELFVYLGIASGLTTLGLPLGPLAISYLLVGMFTNFFRGWI
                     TDFTTAFFEKRMGITLDREVHLSH"
     gene            6750..7751
                     /locus_tag="PXE50_001695"
     CDS             6750..7751
                     /locus_tag="PXE50_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIB"
                     /protein_id="HDL5622597.1"
                     /translation="MSNKAIYIEKGNGGWGGPLTLPVVEGKKVLYMTGGTRPAIVNKL
                     VELTGWEAVDGFKEGEPPAEEIGIAIIDCGGVLRCGLYPKRRIPTINIHSTGKSGPLA
                     EFIVEDIYVSAVKENNIRLIDADGSVPVATEQAKPTSSTTATAKEYDSSKKITEQSDG
                     LLAKIGMGMGSVAALFFQAGRDTIDTVLKTILPFMAFVSALIGIIIASGLGDVIAHGL
                     TPLANSPIGLVTLALICSFPLLSPFLGPGAVIAQVIGVLVGTQIGLGNIPPHLALPAL
                     FAINAQAACDFIPVGLSMAEAKQDTVRVGVPSVLVSRFLTGAPTVLIAWAVSAFIYQ"
     gene            7796..8194
                     /gene="srlB"
                     /locus_tag="PXE50_001696"
                     /gene_synonym="gutB"
     CDS             7796..8194
                     /gene="srlB"
                     /locus_tag="PXE50_001696"
                     /gene_synonym="gutB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIA"
                     /protein_id="HDL5622598.1"
                     /translation="MHRLSKRENIYMTIIYQTTFTKIGNFAQESLTDDMLITFKQGAP
                     ADLQDYCFIHNPSELSSPLEVGDIAEFDGVAYPITAVGSVASENLSALGHITFRFDGA
                     NDAEFPGSVHVIGTPPQGLTENSTLIIKRD"
     gene            8242..9030
                     /gene="srlD"
                     /locus_tag="PXE50_001697"
     CDS             8242..9030
                     /gene="srlD"
                     /locus_tag="PXE50_001697"
                     /EC_number="1.1.1.140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sorbitol-6-phosphate dehydrogenase"
                     /protein_id="HDL5622599.1"
                     /translation="MNNEKKVAIVVGGGQTLGAFLSEGLADAGYRVVVADLNGENAQK
                     VAADINAKQGEGNAIGVQVDAADEPSVEALAKATDTVFGRADVLVYSAGTAKASPIWD
                     FNLNDFDLSVKVNLTGYFLTAKHFSRLMIRDGIKGRIIQINSKSGKVGSKYNSGYSAA
                     KFGGVGLTQSLALDLADKGITVHSLMLGNLLKSPMFQSLIPQYAAKLGIPESEVEQVY
                     IDKVPLKRGCDYQDVLNVLKFYAGEEAAYCTGQSINITGGQVMF"
     gene            9199..9579
                     /gene="gutM"
                     /locus_tag="PXE50_001698"
     CDS             9199..9579
                     /gene="gutM"
                     /locus_tag="PXE50_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GutM"
                     /protein_id="HDL5622600.1"
                     /translation="MDSITLLIILAMIMWLLQAVLGWLQIKAFNQAFMEISKKGKVTV
                     GRNSGRFNPKSVIVLAFDDEKKVVDSLCMKGFSVFARPQKLASVIGLSLDQIVPEKIF
                     PSDKRSQFALKVAISSGYSCSDQK"
     gene            9642..10289
                     /gene="hxpB"
                     /locus_tag="PXE50_001699"
     CDS             9642..10289
                     /gene="hxpB"
                     /locus_tag="PXE50_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexitol phosphatase HxpB"
                     /protein_id="HDL5622601.1"
                     /translation="MQINSVIFDMDGVMIDSEPQWAEAQIAVLADLGINITEQDCEQL
                     TRGKRIDELSDTWIKKFQLSVSNQALSEAILAHGCAAIEQHGKALTGLYELLDFLKSN
                     QIKLAVATSSPPVVIKAVFDRLKLWDYFPIRCSAMDEEYGKPHPAVYLSAVKKLGIEK
                     QECIVIEDSVTGLIAAKAANLTTFLVNTDYQNEKFSIADKRMASLLDVIEKLKQH"
     gene            10332..11129
                     /locus_tag="PXE50_001700"
     CDS             10332..11129
                     /locus_tag="PXE50_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005725056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional repressor"
                     /protein_id="HDL5622602.1"
                     /translation="MKPFERRQQILAYLAQHGRTEVDVLADYFKLTGATIRKDLTSLE
                     EDKKVLRTYGSVVLIDEEILEREEKINKEDKDDKPLAQKTGINLQQKQAIGQKAAELI
                     NEGNSIIFDAGSTVLQMIPHLKAFDNLSLMTNSLTIFNEILKLNKSYNLLISGGTFRE
                     KSASFHGYFAESAFIGSNFDILFIGTDGLDLDVGLTTFNEVYKVSSLMCDAANKIVLL
                     ADSSKFGRKSPNIVCGLEKIHTIITDEGLSQEMREQIKAKGIELLVV"
     gene            11140..12075
                     /locus_tag="PXE50_001701"
     CDS             11140..12075
                     /locus_tag="PXE50_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HDL5622603.1"
                     /translation="MNHLDSAKETLNLYAQQIITLNHRLSEEFNEVVNMILACQGRVV
                     VGGIGKSGLVGKKMVATFASTGTPSFFLHPTEAFHGDLGMLKPIDMVILISNSGETDD
                     VNKLIPSLKNFGNKIIAMTGNPYSTLGRNADVILNIGVEREACLNNLAPTSSTLVTMA
                     LGDALAIALMKARDFRPEDFARYHPGGSLGRKLLNRVRDVMVRKVPTASLDTTFTECL
                     SVMNEGRMGVAVIMQDDKLEGIITDGDIRRTLAKFGAESLNKTADEIMTRNPKTINDT
                     EFLAKAEDLMKELKIHSLIAVNDEGKVTGLMEFSS"
     gene            complement(12119..12669)
                     /locus_tag="PXE50_001702"
                     /pseudo
     CDS             complement(12119..12669)
                     /locus_tag="PXE50_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005752768.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            12971..14830
                     /locus_tag="PXE50_001703"
     CDS             12971..14830
                     /locus_tag="PXE50_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IICBA"
                     /protein_id="HDL5622604.1"
                     /translation="MSNLKVKVQGFGRFLSNMVMPNIGAFIAWGFITALFIPTGWLPN
                     ETFAKLVGPMITYLLPLLIGYSGGKLVGGERGAVVGAITTMGIIVGSEIPMFLGAMIV
                     GPLGGWAIKTFDKAIDGKVKSGFEMLVNNFSVGIIGMILAMLSFAFIGGIVTQISAAL
                     GAGVGALVEAGLLPVTSIIVEPAKILFLNNAINHGVFTPLGTAQAQEVGKSILFLIEA
                     NPGPGFGILLAYMFFGRGTAKQTAGSASIIHFLGGIHEIYFPYVLMSPRLILAVIAGG
                     ATGVLTNSLLGGGLIAPASPGSIFAILAMTAPGAHFAVVASVILSCAVTFAIASILLK
                     TQKGEASLEDAQAQTQAMKAESKGVVNGNINKIYVACDAGMGSSAMGASMLRKKVQAA
                     GLNIEVQNLAINDLPQDAQLVITHKDLTARATQRVATAQHLSLTNFLDSAFYDSLVAK
                     LANHQPQQAVQNTQNFANPVEEPQAEGLKLQAAQVFLGLQANSKEEAIRFAGEQLVKA
                     GFVQPSYVDAMFAREQMVSTYLGEGLAVPHGTSDAKDSVLKTGIVVCQYPNGVRFTDE
                     EDGVAKLVVGIAAKGNDHIQILSAITNALDDEQAMKTLTSTNDVEKVLALLSK"
BASE COUNT         4425 a         2810 c         3231 g         4374 t
ORIGIN      
        1 gttttagtcg ttatctagga cagcccctta ttttttgtat gtagtttgac tgctgcaagc
       61 ggtgtgattt tgctattttt ttgcaaattt agcctgtatt ttatgagcaa caataaacag
      121 cactaagact ccgatgataa ttggatcgaa tgttacgctc tttaccgacc aataataatg
      181 taccatcgcc aatactaatg caggataagc ccactggtga atcgtccccc agcgtgttcc
      241 taattttcgt tttagcatag gcagcgaagt tattgccatt atgcttagaa tgaaaaaagc
      301 agctgctcct aaaatcaaat atgggcgacc ggcaagctcg ctaaaaaata attttacatc
      361 aaggcttaat tctaacaata gatagcttga aatatgtaga gctgcccata caaacgccca
      421 taagcccaat ggacggcgta aaatttgata ctggtttttc tttaggtatt gtagggcaat
      481 accaagtaga aacattatac aaaaaatgac gattgcacca taaccgagaa aatgctccag
      541 ttctttaatc ggatcggcac ctaatattgt ttcattaccc gtatataata gctgtgctac
      601 ccaaactagc ggtaataaac agccaagatg aatgagtata cgtaaccagg ttagcattag
      661 tagttcacct ttaaatctaa gccacggtat aaatttgcca cttcattttc gtagccatta
      721 aacattagtg ttggttggcg tttgacggat aataacccgc ctgcaccaat tactcgttca
      781 gatgcttgcg accaacgtgg atgatcaaca tttggattca cattagcata aaagccatat
      841 tcatttggag caagactttc ccaagtagtg agtgggcgtt tttcagcaaa ggtgattttc
      901 acaatcgact taatactttt aaagccatat ttccaaggca cgactaagcg aataggagca
      961 ccgttttgcg gtggcagggt tttaccgtat aaaccgacgg atagtagtgt taatgaattt
     1021 aaggcttcat ctaagcgtaa agcttctaca taaggataat caatcccacc gcctagcaag
     1081 cgattttttt gccccggcat ttgtgcagga tcatataaag tgtgaaagac cacatatttg
     1141 gctttactgg ttggttttgc catctcaatt aagcgagcta actcaaagcc gatccacggc
     1201 acaaccattg accacgcttc aacacagcga aaacggtaaa tgcgttcttc tagtggaaac
     1261 gtattaagca attgttgatg atttaagcta aacggatttt caacttctcc gccaatttcc
     1321 aatgtccaag gatcggtttt gaagtttgcc gcattttttg ctggtgcact tttatccacg
     1381 ccaaactcat agaaattgtt atagcctatt actttgtttt ccggagtgag ttcaagccct
     1441 ttatttggat ccggtttaaa ctgtagtgat tgcaagtgtc tttgtgtttc tgccatactt
     1501 actttaggca atgcagaagc tgcaatacct aaacctaacg cggtaataat tttacggcgt
     1561 tggtagaaaa tagtttcggg tgtaacatct tgaattgtta attttttcat cgaactatcc
     1621 tttttttatg aattgttgtt attattttgg actcagctga tctagaattc ttacaaaata
     1681 agtgtaattt tttattgggt attccctaaa ggagatatat gaagagtcta tcttctacac
     1741 agatagaaga gattagaaag caaatggtta aatttgccac cctacaacta gccgataaag
     1801 atttagctga ggatgttgta caggatgcct taaccaatgc ctataagcat tcagcctctt
     1861 ttcggcgaga agctgcactt aaaacttgga tttttgctat tttaaagaac aaaattttag
     1921 atttactcag aacacgaaaa cgacatattc cagtcagttc tctatgtgag gaagaagaat
     1981 caccaagtgc ctttttcgat cgccacgatc attggttgga acatcaagat gtaactgaat
     2041 ggaggggggt agctcaatca acttaccaaa aagaattttg ggcaattttt gatatttgtt
     2101 taaataaatt acccgcccag caagcacgag tatttatgat gcgtgaacat ttggagatga
     2161 gtagtgcgga aatttgccaa gaatgtgaaa tttctctctc taacttaaat gtattacttc
     2221 atcgtgctcg tttacgttta caagagtgtt tatctcgcaa ttggtttaga gaggaatcaa
     2281 aatgaaatgc aggcaagcaa cagaacttat ttcacagtct tgtgatgaga aacttcgttt
     2341 gcaacaacat atgcgtttgc agttgcatct tttggtatgc cctaaatgcc gaaattttaa
     2401 taaaaatacc aagaaattag gcaagatatt aagagcttac tgtaacgata aagatgctcc
     2461 gttctgattt attatacatt ttaaaaggag aaaaatatgc gttattggtt aataagttta
     2521 agcatactat taagtggctg tgtcgtgccg gttactccta cggggcaagc cggtatccct
     2581 atgccgatta taattggtgt ctcagatcca cttgattcca aagaggttca catttgtact
     2641 ctaaagccat ttactcagga atatcgtagt gaacatagta gccgaggcag agccaaatta
     2701 aatgtacaaa agcaatgccg tgcaaaccac agtgaaatgt tttgtgaaga aaaagatatt
     2761 gtttgcaaaa cctatgatta gttaaacaag cggtcgtatt ttatctgttt tttgcaaaat
     2821 tttcctaaaa tttgaccgct tgtttattta agcagataac atcaaaattt tatgaggatt
     2881 gtctatgcaa cccatcaata ttgccatcgc aggtgccggc ttttccagcc gagtttttca
     2941 tatcccgttt ttgaaacaag atgctcgttt taatattgta aaggtatatg aacgaacctc
     3001 taacaatgcg gcagaatggt tgccgaatgc agaaacagtg cgggatttca acgctctttt
     3061 aacgccagaa gtggatttag tgctgattac cacaccgaat caaacccatt atgcaatggt
     3121 aaaagagtca ttgcttgcag gcaaacacgt tttagttgaa aaaccgttag tggcaacagt
     3181 ggctgaggcg gaagagttgg cggaacttgc aaagcggcaa ggaaaggtgc tttatgtgta
     3241 ccaaaaccgc cgttgggaca gccatattgc gacggcaaaa tcgctaatgg agcaaaattt
     3301 actgggagag ttggtagatt gcgaaattcg ttttgaccgt tatgcgaaag agaaaaatgt
     3361 taaagtatgg aaagaatcag gcgagcttgg tacaggttta gtgtatgatt taggcgtaca
     3421 tttaattgac caagctttgt atcttttcgg gaagccggag gcggtgtatg ctgatgtgcg
     3481 ttatcagcac gaaggggcat tggttgatga taactttgat attcagctct attatgctaa
     3541 cggttttaaa gtggtgctga aagccagccg atatgctcgt gaaccaagcc cgacatttgt
     3601 attacacgga aaattaggct cttatctgaa acaaactccc gataatcaag aagatttgct
     3661 gaaaaatggc gtacaaccta ttggcaaaga ttggaatatc gaagaaaagg agaactgggg
     3721 aattttacac actgaagtgg aaggtaatgt ggttcgccag ccctatcgaa atgccgaagt
     3781 cagttatcaa aacttgtttg atgatttgta ccaagccatc gctcacaatg ctgagccaat
     3841 tatcaaactc gaagacgtca tttttgtgct aaaagtgatc gaaagcgtat ttgaaagtgc
     3901 aaaattaggg caaaaaatct atttgtaaaa ttttgaggat ttttgaccgc ttgttattct
     3961 ctctgatggc gcaagcgtcc acgcttgtgc ctattgatta ttttagcttt gtttctagta
     4021 caagcgtgga cgcttgcact atctaaaaaa tcatctcccc cattgctttt cccatctcga
     4081 ttggctaata tgcaacctca atccgtagtt agaatactta atatgttaag ttttaactgt
     4141 tttttcactc taataaggat catttcaatg aataaactta ttgcctcttt ggtggcttca
     4201 agctgtgcga cggcttttgc tgctcctgtt caacagaaca atttccacac cactacccac
     4261 acttacgaat ttacgcaatc ttatgattta gttgtgccac aaggctcgaa aggaacaact
     4321 aatttgtgga ttccgttgcc gtctgatacc gattatcaaa cggtaaaatc gatagagttt
     4381 gagggaagtt acaaaaacgc ctatatcaca gaaaataacg cttatggtgc aaaaaccttg
     4441 tttgccactt gggatactga tgcaccaaag cgtgatctaa aagtgaaaat ggtgatccaa
     4501 acccaagatc gtgagcctat ggctcaaggg gcgttggcaa attaccaaat gccggagaaa
     4561 atcacttatt ctgttgatgt attggagtat ttaaaaccaa cggctcacat taaaacagac
     4621 ggtattgtga aagaatatgc cgataaaatt gtgggtaacg agcaaaatcc gttgaaaaaa
     4681 gcggaactta tccacaagtg gattgttgat aatatggaac gtgataactc ggtgctaggc
     4741 tgtggcgatg gcgatgtgga gaaaattctc accaccaaag tgctaaaagg taaatgtacc
     4801 gacatcaact cggtgtttgt agcacttgct cgtgcctcta acattcctgc tcgtgaagtg
     4861 tttggtattc gtttagggca agcggtaaaa atggggcaat attccaaaac cgcatttggt
     4921 agctcaaaag atggcgtggc gaatgaaagc ggcgggcagc actgccgtgc agagttctat
     4981 ttagcaggct tcggctgggt gcctgtagat tctgccgatg tcgctaaaat gcgtttagcc
     5041 gagaaaaaag acgtggatga tgctgatgtt caagcggtct cgaaatactt attcggcaac
     5101 tgggaaatga actgggtagg cttcaatcac ggacgtgatt tcgatttata tccacaaccg
     5161 gaacttacac cactgaataa ctttggctac ccttatgctg aggtaggtgg tgacccgtta
     5221 aactcgtttg aggcgaaaga atttggctat gaattcatct ctaaagagtt ataaccataa
     5281 atttatcaca atgtgcgtga ccgccatagt gtcggcggtg acctccacat tctgttgtat
     5341 tgggccactg gtttatttag tgtttggcat ctcttcccct tggttgatgg agctaaacca
     5401 actggagttt ctacaactgc cgatgttgct gatttcgctc gctgcgtttg gctatggctt
     5461 ctggttgctg aatttttcca acaaaatcat ctgcaccaaa tacttctccc gcagaaccct
     5521 ggtcattttg tattgggtag tttctgtggt ggtgatgttc tttttaactt acccttatgt
     5581 attgccttac attttggaaa tgtggagcgg agaataaaat gaaaaaatat atcgcaacga
     5641 tgctgttggc ttttggtttg gttcattcaa gctacgcaca agaaaaaaca gctcaaattg
     5701 aaacgaaaca agcagagaaa accgtcgtcc tccatattcc ggaaatgtac tgccagctct
     5761 gcgtttattt agtcaataaa gaactacgag cagtagaagg tgtgatttcc accaaagcct
     5821 caatgaaaga gcgaaaagcg actgtggtgg taaaagaaag tgtggataac caagccctga
     5881 tacaagcggt cggaaacctc aaatatactg caaaagtcat tgaataaaac caaagctcaa
     5941 acattattgt ttgagctttt ttaatttagc cttccttttt tcccccatct aatattcaaa
     6001 cttcactttt gttttgattt aaaatgaaaa aataatttat tttgaaagtt gtttctcatt
     6061 ttgtgatcgc tgtcacagtt tttaaaataa aaataattta ctatttgcac atctcataac
     6121 agagatgaaa gaaaaatatt ttattttgaa aaacggagat cggtatgatt gaagcaatta
     6181 cacacggagc agaatggttt atcggcctgt tccaaaaagg cggtgaaacc ttagtcggta
     6241 tgataaacgg tattttgcca ctcttaattt cattattggt tgtaatgaat gccctgatta
     6301 aatttgtagg gcaagatcgg attgaacgac ttgctcaacg tagtgccgga aaccctattt
     6361 cacgttattt gatcttaccg gtgatcggca ctttcgtttt ctgtaacccg atgacattaa
     6421 gcttagggcg tttcttaccg gagcgttaca aaccaagcta ctacgccgca gcctcttata
     6481 gttgccactc tatgaacggc ttattccctc acatcaaccc gggtgaatta ttcgtttatt
     6541 taggtattgc cagcggttta accaccttag gcttaccact tgggccttta gccatcagtt
     6601 atttattagt cggtatgttt accaatttct tccgtggctg gataacagac ttcaccaccg
     6661 cattctttga aaaacgaatg gggatcacct tagatagaga agtacattta tcccactaac
     6721 caagtaactg aaatacagag gaatagatta tgagcaacaa agcgatttac attgaaaaag
     6781 gcaacggtgg ttggggtggt ccattaacat tacctgttgt ggaaggcaaa aaagtgcttt
     6841 atatgaccgg cggcactcgc cctgcgattg ttaataaatt ggtggaatta accggctggg
     6901 aagcggttga tggttttaaa gaaggcgaac cgccggcaga agaaatcggg attgcgatta
     6961 ttgattgcgg tggggtatta cgctgtgggc tttacccaaa acgccgtatt ccaaccatta
     7021 acattcactc caccggtaaa tccggccctt tagcagaatt tattgtggaa gatatttatg
     7081 tttcagcggt gaaagaaaac aatattcgct taattgatgc cgatggaagt gtgcctgtgg
     7141 caacagagca agcaaaacca acttcatcaa cgacagcaac ggcaaaagag tatgactcca
     7201 gcaaaaaaat caccgaacaa agtgatggtt tattagcaaa aatcggtatg ggaatgggat
     7261 cggtggcggc gttattcttc caagccggac gagacactat tgatacggtg cttaaaacca
     7321 ttttaccgtt tatggcattt gtttctgcgt taatcgggat catcattgcg tcaggtttag
     7381 gtgatgtgat tgcccacggc ttgacccctc tggcaaacag cccaatcggt ttagttacac
     7441 tggcgttgat ttgttccttc cctctccttt ccccattctt agggccggga gccgtgattg
     7501 cacaagttat cggcgtgtta gtcggtacgc aaatcggttt aggcaatatt ccgccacatt
     7561 tagcactgcc ggcactcttt gctattaatg ctcaagccgc ttgtgatttt attcctgtgg
     7621 gtctttcaat ggcggaagca aaacaagata ccgtacgggt gggtgtaccg tcagtattag
     7681 tcagccgttt tttaaccggt gcaccgaccg tgctgattgc gtgggcagtt tccgcattca
     7741 tctaccaata attaaccacg atacaagcgg tggaatttga aaaatttttt gcaaaatgca
     7801 ccgcttgtca aaacgagaga acatttatat gacgattatt tatcaaacga cctttaccaa
     7861 aatcgggaat tttgctcagg aatcattaac agacgatatg ttaatcactt ttaaacaagg
     7921 cgcaccggca gatttacaag attactgctt cattcataat ccatctgaat taagtagccc
     7981 tttagaagta ggcgatatcg ctgaatttga tggcgtagct tatccgatta cggcagttgg
     8041 tagcgttgca tctgaaaact tatccgccct cggacacatt accttccgtt ttgacggggc
     8101 aaatgatgcg gaatttccgg gaagcgttca cgttatcgga acaccgccgc aaggcttaac
     8161 agagaactca accttgatta tcaagcgtga ttaatgacgg attaaaaata atttcaaatt
     8221 gaaaatttag aggaatacat tatgaacaat gaaaaaaaag ttgctatcgt tgttggcggc
     8281 ggtcaaacac ttggagcttt tttatctgaa ggcttggcag atgccggtta tcgtgtggtg
     8341 gttgctgact taaacggcga aaatgcacaa aaagtggcag ccgacattaa tgccaaacaa
     8401 ggcgaaggaa atgcgattgg ggtgcaagtc gatgcggctg atgaaccaag cgttgaagca
     8461 ctagctaaag caacagatac cgtattcggg cgtgccgatg tattggttta cagtgcaggc
     8521 acagcgaaag catcgcctat ttgggatttc aacttaaacg attttgattt gtcggtaaaa
     8581 gtgaatttaa ccggttattt cttaaccgca aaacacttct cccgcttaat gattcgtgac
     8641 ggtattaaag ggcgtatcat tcaaattaat tctaaatcgg gtaaagtagg gagtaagtat
     8701 aattccggtt atagtgcagc gaaatttggt ggtgttggtt taacacaatc gttagcatta
     8761 gacttggcag ataaaggcat taccgtgcat tcattaatgt taggcaattt attgaaatcg
     8821 ccgatgttcc aatcgttaat tccgcaatat gcggcaaaac tcggcattcc ggaaagcgaa
     8881 gtagagcaag tttatattga taaagtgcct ttaaaacgtg gctgtgatta tcaagatgtg
     8941 ttgaatgtct taaaattcta tgccggcgaa gaggcagctt attgcacagg acagtctatt
     9001 aatattaccg gtggtcaggt aatgttctaa gcaaacaagc ggtcaaattt gtcgattttt
     9061 ttacaacaat ttgcaaaaaa tgactaaaat aaaccgcttg ttaattcgcc acaccggtta
     9121 atatgccaca ggggaaagcg tattgttttg aaatcgcagg tacgtttagg ctctgtggct
     9181 ttttattaag gagcaatgat ggattcaatt acacttctga ttatattggc aatgataatg
     9241 tggctgttac aagccgtttt gggttggctt caaattaaag cctttaacca agcctttatg
     9301 gaaatcagta agaaaggcaa agtaacggtt gggcgtaata gtggtcgttt taatcctaaa
     9361 tcggttattg tgttggcgtt tgatgatgag aaaaaagtgg tagatagcct ttgtatgaaa
     9421 ggattttccg tctttgccag accgcagaaa ttagcgtctg tgattggttt gtctcttgat
     9481 caaattgtgc cggaaaaaat ctttccaagc gataaacgtt cacaatttgc cttaaaagtg
     9541 gcgatatctt ccggatatag ttgctcagat caaaaataat gcgatttttt atttcatttt
     9601 gaatattttt ttagttaaaa atgagataat ggagaataaa tatgcagatc aatagtgtca
     9661 tctttgatat ggacggggta atgattgatt cagaacccca atgggcagag gctcaaattg
     9721 cagtattagc cgacttaggt attaatatca ccgagcaaga ttgcgaacaa ctcaccagag
     9781 gtaagcggat tgatgagttg agcgacactt ggattaaaaa atttcagtta tctgtttcca
     9841 accaagcatt aagtgaagcc attttggcac acggttgtgc tgcgattgaa caacacggca
     9901 aagcattaac gggtttatat gaattattgg atttcttaaa atctaatcag atcaagttag
     9961 ccgttgcaac ctcatcgccg ccggtggtga ttaaagcggt gtttgatcgc ttaaaactgt
    10021 gggattattt cccgattcga tgcagtgcaa tggacgaaga atatggcaag ccacaccctg
    10081 cggtctattt gagtgcagtg aaaaaattag gcattgaaaa acaagagtgt attgttattg
    10141 aggacagtgt aaccggctta attgccgcca aagccgctaa tttaactaca tttttggtga
    10201 ataccgatta tcaaaatgaa aaattttcaa ttgccgataa aagaatggca tcgctactag
    10261 atgtcattga aaaattaaaa cagcattagc acagattagc tcgctccaat ctttgctaaa
    10321 ttggaggaac aatgaaacct tttgaaagaa gacagcaaat tttagcctat ttagctcagc
    10381 acggtagaac cgaagtggac gtgctggcag actattttaa gctaactggt gcaaccattc
    10441 gtaaagattt aacttcactt gaagaagata agaaagtctt gcgtacttat ggcagtgtag
    10501 tcttaattga tgaagaaatt cttgaacggg aagagaaaat caataaagag gacaaagacg
    10561 ataaaccgct tgcacagaaa accggcatta atcttcaaca aaagcaagct atcgggcaaa
    10621 aagctgcaga gttaattaat gagggaaact ctattatttt tgatgcaggc agcacagtgt
    10681 tacaaatgat tccccattta aaagcatttg ataacctctc tttaatgaca aatagtttaa
    10741 ctattttcaa tgagattttg aaactcaata aatcctataa cttactgatt tccggtggta
    10801 catttcgtga gaaatcagct tcatttcacg gttattttgc tgaatccgct tttattggtt
    10861 caaattttga catactcttt attggcacag acggactaga tttagacgtt ggattaacga
    10921 ctttcaatga agtatataaa gtcagttcgc taatgtgtga tgcggcaaat aaaatcgtct
    10981 tacttgccga ctccagtaag tttggacgta aaagtccgaa tattgtgtgt gggttagaaa
    11041 aaattcatac tatcattacc gatgaaggat tatctcaaga aatgagagaa cagattaaag
    11101 cgaaagggat tgagctgtta gttgtataag ggcgtaaaaa tgaatcattt agacagtgca
    11161 aaagaaacgt taaacctcta tgctcagcag attatcacgc taaaccatcg actttctgaa
    11221 gaatttaatg aggtggtaaa tatgatactc gcttgtcaag ggcgagtggt tgttggcggt
    11281 attggaaaat cggggctggt tggcaaaaaa atggtggcaa cttttgcctc caccggtaca
    11341 ccgagctttt tcttgcaccc gacagaggct tttcacggcg atttgggaat gctgaaaccg
    11401 attgatatgg taattctgat ttctaacagt ggtgaaactg atgatgtgaa taaactgatt
    11461 ccaagcctga aaaatttcgg caataaaatt attgcgatga caggtaatcc ttactccaca
    11521 cttgggcgaa atgccgatgt gattttaaat attggtgtag agcgtgaagc ctgcctgaat
    11581 aatctagctc caaccagctc tactttggta acgatggctt taggcgatgc gttagccatt
    11641 gcgctaatga aagcccgtga tttccgccct gaagattttg cccgctacca cccgggtggc
    11701 agtcttggtc gtaaattatt gaacagagtg cgagatgtga tggtgcgtaa agtgccaacc
    11761 gccagcttag acaccacctt taccgaatgt ttatctgtga tgaacgaagg gcgtatgggg
    11821 gtggcggtaa ttatgcaaga cgataaattg gaaggcatta ttaccgatgg tgatatccgc
    11881 cgcacattag cgaaattcgg ggcggagagc ctaaataaaa ccgctgacga aattatgacc
    11941 cgtaatccaa aaaccattaa cgataccgaa tttttagcca aagccgaaga tttaatgaaa
    12001 gagctgaaaa ttcactcatt aattgcagtg aatgatgagg gtaaagtaac gggattgatg
    12061 gagttctcta gttaatttat agatgtaacg atggcgcaag cgtttacgct tgtgccgttc
    12121 actgacatat atcaatatct aataaaacag gtaagttgtt agcataattt cttgcactgc
    12181 tatatttcca ttcaaatgcc tcgcatacaa aaccgcttac gatagggttg ttgtgaatat
    12241 ggtttagctt ttcatcaaaa aatttctgag aatagattgt tatcggttgg ttatgatgtt
    12301 gccaaagttg gtattgcttg acattatttc gttgtttagc tgcccgagta aacatccata
    12361 ataaccattc ttttctactt tcttggggat ttgttttaat ttgctgaatc aacatttaga
    12421 tgtaaatgtt ttaaaatctc ttattaaatc tgacgggttt tggtcttttg cttgaaataa
    12481 taaatgaata tggcttggca taatgcagta gccatataaa atcatccctt tttgttttcg
    12541 acaataattc aatgattgga taatggtttg aaaataatct tctcgaataa atagatcaat
    12601 ccaataaact gttgcaaaac taacaaaata ggctccgctc ttctcataaa acttatattt
    12661 tctactcatt atgaacctct aaagtgcagt ttatgctgat agtaatatag gtgaacagtt
    12721 agggttagca attcatttta ttttttcgat gtagatcgca aaaatagaat tatgcttggc
    12781 acaagcgagg acgcttacgc catctttact ccaaaaatgt gagatagatc acattttcaa
    12841 atctgcccaa aaaaatttaa tgtgatctac ttcacatttc tgagagaaac atttttgtaa
    12901 cttttgaaag tggtgctaat ttaagcacga ttttttcaac cctaattttc tctccttttt
    12961 tgaggtttct atgtctaatt taaaagtgaa agtccaaggt tttgggcgtt tcttatcgaa
    13021 tatggtgatg ccgaatatcg gtgcctttat tgcgtggggc tttatcaccg ccctgtttat
    13081 tccaaccggt tggttgccga acgagacttt tgctaaactg gtcggtccga tgattactta
    13141 cttgctgcca ctgttaatcg gttacagcgg tggtaaatta gtcggtggtg agcgtggtgc
    13201 ggttgtaggt gcgattacta caatgggtat tatcgtgggt tctgaaatcc cgatgttctt
    13261 aggtgcgatg attgtaggtc cattaggcgg ctgggcgatc aaaaccttcg ataaagcgat
    13321 tgacggcaaa gtaaaaagcg gttttgagat gttggtaaac aacttctcgg tcgggatcat
    13381 cggtatgatt ttggcaatgc tttcatttgc tttcattgga ggtatcgtca cccaaatctc
    13441 tgcggcatta ggtgcaggtg tgggggcgtt ggttgaagct ggtcttctgc cagtaacctc
    13501 tatcatcgtt gaaccggcga aaatcctatt cttaaacaat gcgatcaatc acggtgtgtt
    13561 cacgccattg ggtacagcac aagcacaaga agtgggcaaa tctattctgt tcttgattga
    13621 agcgaacccg ggtccgggct ttggtatctt gcttgcctat atgttctttg gtcgtggcac
    13681 agcaaaacaa accgctggta gtgcgtcaat cattcacttc ttaggcggta ttcacgaaat
    13741 ttatttcccg tatgtgttaa tgagcccacg cttaattctt gcagtgattg caggcggtgc
    13801 aaccggcgtt ttaaccaact cattattagg tggcggttta atcgcaccgg cttccccggg
    13861 ttctattttt gcgattttag caatgaccgc accgggtgct cactttgcag ttgttgcctc
    13921 cgtgattctt tcttgtgccg tgacttttgc gattgcgtca atcttactca aaacccaaaa
    13981 aggtgaagcc tcattggaag atgcacaagc acaaactcaa gcgatgaaag cagaaagcaa
    14041 aggcgtagta aatggtaaca tcaacaaaat ctatgtagcg tgtgatgccg gtatgggttc
    14101 aagtgcgatg ggtgcgagta tgttacgcaa aaaagtgcaa gcggcaggtt taaacattga
    14161 agtacaaaac ttagcgatca acgacttacc gcaagacgca caactggtga ttacccacaa
    14221 agacttaacc gctcgtgcaa cacaacgtgt ggcaacggct caacacttat cgctcactaa
    14281 cttcttagac agtgcgttct atgacagctt agtggcaaaa ctggctaacc accagccaca
    14341 acaagcggtg caaaatacac aaaattttgc aaacccggtg gaagaacctc aagccgaagg
    14401 gttaaaattg caagcagccc aagtcttttt aggcttacaa gctaacagta aagaagaagc
    14461 gatccgcttt gccggtgagc agttagttaa agcgggcttt gttcaaccaa gctatgtaga
    14521 tgcaatgttc gcccgtgagc aaatggtttc aacttactta ggcgaaggct tagctgtgcc
    14581 acacggtaca tctgatgcca aagacagcgt actgaaaacc ggtatcgtgg tctgccaata
    14641 cccgaacggc gttcgcttca ccgatgaaga agacggcgtg gcgaaactgg tggtcggtat
    14701 tgcagcaaaa ggcaacgacc atatccaaat tttaagtgca attaccaacg cactggacga
    14761 tgaacaagca atgaaaacac tgacctcaac aaatgacgtg gaaaaagtgt tagcattatt
    14821 atctaaataa tcaccctgtt
//
LOCUS       DANLZQ010000067        14766 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.067, whole genome shotgun sequence.
ACCESSION   DANLZQ010000067 DANLZQ010000000
VERSION     DANLZQ010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 14766)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14766)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14766
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.067"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(58..546)
                     /gene="sixA"
                     /locus_tag="PXE50_001704"
     CDS             complement(58..546)
                     /gene="sixA"
                     /locus_tag="PXE50_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphohistidine phosphatase SixA"
                     /protein_id="HDL5622605.1"
                     /translation="MNIWIMRHGEAGFNASSDAARCLTDNGIKNTISQGKWLGEHLAN
                     QQIQLDKILVSPYLRAQQTLENVLIGMQAVNFPQHFTNLIESWDEVTPDGNPHTVESY
                     LHFLREEGAKNILLISHLPLVFDLVQILTNNQSNVQFPTSTIAEINWVKTKAELIRVK
                     HT"
     gene            673..2112
                     /gene="pyk"
                     /locus_tag="PXE50_001705"
     CDS             673..2112
                     /gene="pyk"
                     /locus_tag="PXE50_001705"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005818583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HDL5622606.1"
                     /translation="MSRKLRRTKIVCTMGPATDRGNTLEKIIAAGANMVRMNFSHGIP
                     EDHIERANKVREIAARLGRHVAILGDLQGPKIRVSTFKDGKIFLNIGDKFTLDADLPR
                     GEGHQEAVGLDYKNLPNDVVPGDILLLDDGNVQLKVLEVEGVKVHTEVTVGGPLSNNK
                     GINKLGGGLSAPALTDKDKEDIKLAAKIGVDYLAVSFPQSSADLHYARELAKEAGLEA
                     KIVAKVERAETVATEEAMDDIILGADVVMVARGDLGVEIGDAALVGVQKRLIRRARKL
                     NRVVITATQMMESMIKKPMPTRAEVMDVANAVLDGTDAVMLSGETANGDYPVETVKSM
                     AEVCLGAETMPSINISRHRMEGTFKSIEEAVAMSAMYTANHLEGVSAIISLTHSGETA
                     KLTSRISSGLPIYAMSRNQKALNLCALYRGVTPVYYNEDSRTMEGAKKAIAQLKEQGY
                     LLTGELVLLTHGDELKAGGTNTCRILRVE"
     gene            2208..3245
                     /locus_tag="PXE50_001706"
     CDS             2208..3245
                     /locus_tag="PXE50_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HDL5622607.1"
                     /translation="MHNKLLSICILRLSAIGDVCHTLAVIQAIQRKYPSAEITWIIGK
                     TEAYLMKDIPNVHLIPYDKKIGWKGIFTLWQKLSHKRFDFLLNLQTAFRASILSLGIK
                     AKKKIGFNQDRAREMQWLFTNQKVEMTDSPHVLDGQMMFAKAIGIMDLSAQWNLPVSD
                     EDLAYGKQFIDFTRKNILIAPCSSKKEKDWLPERYAEIANWLSKQNINVLIAGSPSQY
                     EMETAAKIQQLAPNCTSIAGKTTLKQLAGVIRQVDLVISSDSGPAHIATTQNTPVIGL
                     YAIHNPRRTGPYNDLDKVVSVYDEAILQSYGKPWQQLAWATKAKGKNWMEKITVESVK
                     QKVVETLKITL"
     gene            3285..4343
                     /locus_tag="PXE50_001707"
     CDS             3285..4343
                     /locus_tag="PXE50_001707"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HDL5622608.1"
                     /translation="MNTVFNQDSVHNVNIQDEKVLLTPQELKQEFPLPEHLRNQIERS
                     RKTISDIIHRRDKRQLIVIGPCSIHDPVAALEYGKKLKALSEQVSDKLYIVMRVYFEK
                     PRTTVGWKGLINDPKMDGSFDVETGLRIARKLCLDLAELGLPLATEALDPMTPQYLAD
                     LFSWSAIGARTTESQTHRELASGLSMAVGFKNGTDGDLAVALNAMQSSAQSHSFIGIN
                     QQGQVTLLKTKGNADGHIILRGGKTPNYEKQYVDDCEWVLKQANLPTAIMIDCSHGNS
                     NKDYRRQPLVAENVLEQLLAGNTSIIGLMIESNLHAGNQSSELPFEQMKYGVSITDAC
                     IDWQTTEELLTHFAEKLR"
     gene            4398..5519
                     /gene="tyrA"
                     /locus_tag="PXE50_001708"
     CDS             4398..5519
                     /gene="tyrA"
                     /locus_tag="PXE50_001708"
                     /EC_number="1.3.1.12"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional chorismate mutase/prephenate
                     dehydrogenase"
                     /protein_id="HDL5622609.1"
                     /translation="MNPLAPLREQIDQVDQQLIALLSERLALVAEVGKVKSEHGIPVY
                     APERETAMISARRSEAEKQGIPADLIEDVLRRIMRESYANENKHGFKRVNSDIQKIVI
                     VGGKGKLGGLFGNYLTLSGYNVEALGRDDWDNAEQILANADVVIVCVPIANTLATIER
                     LQSYLTENMILADLTSVKHQPLQKMLEVHNGAVVGLHPMFGPDIASQAKQVVACCHGR
                     FPERYQWLLEQIKIWGAKIEEIEAAAHDNAMTYIQALRHFSTFAFGLHLSRQPVQLSQ
                     LLALSSPIYRLELAMIGRLFAQDGSLYADIIADKPENLATIETLKESFEQGLDFFKRN
                     DKAGFIKAFEEVHHWFGDYSEQFLKESRVLLQQAHDSRK"
     gene            complement(5710..6795)
                     /gene="recF"
                     /locus_tag="PXE50_001709"
     CDS             complement(5710..6795)
                     /gene="recF"
                     /locus_tag="PXE50_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HDL5622610.1"
                     /translation="MALTRLLINHFRNIQHTDLAFSPHFNFLVGANGSGKTSLLESIF
                     YLGHGRSFKSHISNRIIHYDKDDFVLHGKIDEAKHSWSVGIQKFRSGETTLKINGEDG
                     NKIADLAHLLPMQVITPEGLTLLNGGPSFRRAFLDWGLFHQHPDFYAHWNNLRRLLKQ
                     RNSALQQVRSYQELKAWDIELVKTTYAVSEMRAEYAEALRPEIEKTCQFFLPEIEIGL
                     SFHQGWEKGADYAEILAQGFERDKALGYTMIGAQKADFRFKANGLPVEDVLSRGQLKL
                     LMCALRLAQGEHLVAQKQRQCLFLIDDFASELDPTKRELLAHRLRESGSQVFVTAITQ
                     DQLNQMQWQDRSDDCLFTVKNGEIQPQ"
     gene            6935..7264
                     /locus_tag="PXE50_001710"
     CDS             6935..7264
                     /locus_tag="PXE50_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001364632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HDL5622611.1"
                     /translation="MFGKGGLGGLMKQAQQMQERMQKMQEEIAQLEVTGESGAGLVKV
                     TINGAHNCRRIEIDPSLMEDDKEMVEDLVAAAFNDAVRRAEEMQKEKMASVTAGMQLP
                     PGMKFPF"
     gene            7272..7877
                     /gene="recR"
                     /locus_tag="PXE50_001711"
     CDS             7272..7877
                     /gene="recR"
                     /locus_tag="PXE50_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015939588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HDL5622612.1"
                     /translation="MQTSPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGVALS
                     KALNEAMSHIGHCKSCRTFTEEEECTICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFS
                     GRYFVLMGHLSPIDGIGPREIGLDLLQQRLEQESFHEVILATNPTIEGDATANYIAEM
                     CRMYNVKATRIAHGVPVGGSLEMVDGTTLSHSFAGRRDIDI"
     gene            7949..8275
                     /gene="grxD"
                     /locus_tag="PXE50_001712"
     CDS             7949..8275
                     /gene="grxD"
                     /locus_tag="PXE50_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005705415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HDL5622613.1"
                     /translation="METIDKIKQQISENPILLYMKGSPKFPSCGFSARAVEAVINCQV
                     PFGYVDILTNPDIRAELPKFANWPTFPQLWVEGELVGGCDIVLEMLQKGELQTLLKET
                     AAKHAA"
     gene            8417..9454
                     /locus_tag="PXE50_001713"
     CDS             8417..9454
                     /locus_tag="PXE50_001713"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HDL5622614.1"
                     /translation="MALKELDWANLGFSYIKTDYRFIAHWKDGKWNEGELTQDNTLHI
                     HEGSTALHYGQQCFEGLKAYRCKDGSINLFRPDQNAERMQRTADRLLMPRVPTELFIR
                     ACKKVVKANQDWLGPYGSGATLYLRPFLIGVGENIGVKAAPEFIFSVFCCPVGAYFKG
                     GLAPSNFITTDYDRAAPMGTGGVKVGGNYAASLLPHELAVEQSSTTRKFADAIYLDPK
                     THTKIEEVGAANFFGITKDNKFITPISESILPSITKYSLLHLAQERLGMEAIEGDVYI
                     DQLDQFAEAGACGTAAVITPVGGIQHKDKFHVFYSETEVGPVTRRLYAELTGIQFGDV
                     EAPQGWIVKVE"
     gene            9481..10029
                     /locus_tag="PXE50_001714"
     CDS             9481..10029
                     /locus_tag="PXE50_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane lipoprotein lipid attachment
                     site-containing protein"
                     /protein_id="HDL5622615.1"
                     /translation="MAKLFANSTACLYLENMKKLIFLGLSALALAGCSSTISNPNQLI
                     GQWQCTIEYDDFNIRTVDNLRFSTNGTMTNQGGIYYPIQKSIFEYSLQQNGRWSVKNG
                     AIVYRIVSESVQRSHRSQIWSELQRDAELQQFEENLFSSLSDSDNNKTVELIITDFDE
                     KEMDIKQEIKGHKAYKGQCIKQ"
     gene            10038..10382
                     /locus_tag="PXE50_001715"
     CDS             10038..10382
                     /locus_tag="PXE50_001715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDL5622616.1"
                     /translation="MIQRFEVGSRFSEMAIHNGVAYLAGQVPLDDTADAYTQTQQVLA
                     EIDKWLAKANSDKSKILMATVYLKEMADYAEMNRAWDEWVAPNNAPPRAAVEAKLANP
                     NWKVEIVVTAAV"
     gene            complement(10415..12193)
                     /locus_tag="PXE50_001716"
     CDS             complement(10415..12193)
                     /locus_tag="PXE50_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HDL5622617.1"
                     /translation="MSTLDFHFIHRFHQQVQALSHHPALRFMQDEKWSEISWLELQKQ
                     VNNLSYALLANGLAVQEKIAIFAQNMPRWTITDIAAMQIRAVAVPIYATSTTKQLEYI
                     LNDGDIKILFVGDQEQYDQAIEIANNCSLLIKIVAMKDSIDLRDFPIAQHWQDFIKVN
                     QDEAELTKRLNDKCLEDLFTLIYTSGTTGEPKGVMLDYANLAHQLQAHNKALPHIDEN
                     DISLSFLPLSHIFERAWVTYVLYRGAVNCYLEDPQQVRQALSTVRPTLMCAVPRFYEK
                     IYTAVWDKVQQAPIHRRALFKWAIRTAEDNLFGKKSAFFHRLQYIMADKLVLGKLRAL
                     LGGRIRMMPCGGAKLDPSIGLFFQSIGINVKLGYGMTETTATISCWQEKGFNINSTGT
                     LMPDVEVKISEENEILVRGGLVMKGYYKKPEATAQAFTAEGFLKTGDAGELDSEGNLY
                     ITDRIKELMKTSNGKYIAPQYIEGKIGKDKFIEQIAVIADAKKYVSALIVPCFDSLEE
                     YAKKLNIRYQDRLELIKHYEVVRMFEQRINELQKDLASFEQIKKFTLLSQAFSTKMEE
                     ITPTLKLRRKVILERYKQQIEKMYES"
     gene            complement(12419..12988)
                     /locus_tag="PXE50_001717"
     CDS             complement(12419..12988)
                     /locus_tag="PXE50_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005821628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P hydroxylase"
                     /protein_id="HDL5622618.1"
                     /translation="MNQENHKIEDIIRIFNQCFSDEYNTRLERGGNYPIYLPEFMDED
                     GVPSERPYNVILFAHGYYSSALHEIAHWLVAGEARRKLEDFGYWYEPDGRSAERQREF
                     ESAEIKPQAIEWVLATAAGFRYFASADNLSGNPGDNSAFKQAVYDQVKLYAERGYLPK
                     RAETLRKALCAFYGTPDVIDLAQFDIERI"
     gene            complement(12998..14761)
                     /locus_tag="PXE50_001718"
     CDS             complement(12998..14761)
                     /locus_tag="PXE50_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HDL5622619.1"
                     /translation="MIRYFFSLVLSLLMINSSHANLFSQPKFLKSEEAFVFSIQNENE
                     TLQLNWDIADNYYLYKKEIRVTPQNIEIGDITFPAAEQYNDEFFGQVEIYRNHLGLKV
                     PFKEIKDNASIVVEYQGCTKGFCYPPERVELKLDSILSATPEELAQLEAQAVEKSENF
                     AKTDNMAPPENVAKAEQDQLAENLANNRFSIFWFFVLGVGLAFTPCVLPMLPLLSAIV
                     IGNKQRPSTAKALLLSIAYVQGMAVTYTLLGLIVAAIGLPFQIALQSPPVLIGLSIVF
                     ILLACSMFGLYEIQLPNSWQQKLNAMSQKQQGGALGSVFLMGMIAGLIASPCTSAPLS
                     GALLYVAQSGDLVTGGLALYLLALGMGLPLILITLFGNKILPKSGEWLLKVKAAFGFV
                     MLALPVFLLSRVLPSHYEPFLWSALAVAFLIWLVDAIPSNSITKKIIKVLLLLALAIA
                     AKPWADLAWNGSTTQQQTTPHLALEKIQSLADLETKLTASKGKKVMLDLYADWCVACK
                     EFEKYTFSDQNVQNKLNEMVVLQIDMTKNSAENIELMKHFNVLGLPTILFFDENGNEM
                     SQSRVTGFLDAEQFLAWLNKL"
BASE COUNT         4449 a         2845 c         3196 g         4276 t
ORIGIN      
        1 tcgacaattt ataaaaaaat tgaaaatttt tatattgaca ttctaaaaat gaaagaatta
       61 agtatgcttt actcgaatta gctcagcttt tgtctttacc caattaattt ctgctatggt
      121 tgaagttgga aattgtacat tgctttggtt attcgttaaa atttggacga gatcgaacac
      181 aagtgggaga tgtgaaatca gaagaatatt ttttgcgcct tcctctctta aaaaatgtag
      241 atagctttct actgtatgcg ggtttccgtc aggcgtaacc tcgtcccaac tttcaatgag
      301 gttggtaaaa tgttggggaa aattgaccgc ttgcatacca ataagcacat tttcaagcgt
      361 ttgttgcgcc ctaaggtatg ggctgacgag aattttatct aattgaattt gttggttggc
      421 taaatgttct cctaaccatt ttccctgtga aatggtgttt tttataccat tgtcggttaa
      481 acagcgagca gcatcactcg aagcattaaa gcctgcttcc ccatggcgca taatccaaat
      541 attcataaca ttctccttta gttgtattta aactctcttg atttaggcgt ataatgaccc
      601 tcgtttaacg cataatcaag atgcttagaa agattttaac ttaattttta aatttattga
      661 tggagtcaaa taatgtctag aaaactcaga agaacgaaga tcgtttgtac aatgggacct
      721 gcaacagatc gtggcaatac gttggaaaaa atcattgctg ccggtgcaaa tatggttcgt
      781 atgaatttct ctcacggtat tcctgaagat cacatcgaac gtgcgaataa agtgcgtgaa
      841 attgctgcaa gattaggtcg ccacgttgcg attttaggcg atttgcaagg tcctaaaatt
      901 cgtgtttcga catttaaaga cggtaaaatt ttcttaaata ttggtgataa attcacctta
      961 gacgcagatt taccgcgtgg agaaggccat caagaagctg taggtttaga ttacaaaaac
     1021 ttaccaaatg atgtagtacc tggtgatatt ctattgttag atgacggtaa tgttcaactg
     1081 aaagtgttgg aagtggaagg cgttaaagtt catactgaag tgacagttgg tggcccgtta
     1141 tcaaacaata aagggattaa caaattaggt ggtggtttat cagctcctgc attaaccgac
     1201 aaagataaag aagacattaa attagcggcg aaaatcggtg tggattacct agcggtttca
     1261 ttccctcaat caagtgcaga tttacattat gcacgtgaat tagcaaaaga agcaggctta
     1321 gaagcgaaaa ttgtagcgaa ggttgaacgt gccgaaactg ttgcgactga agaagcaatg
     1381 gacgacatca ttttaggtgc ggacgttgtg atggttgctc gtggtgactt aggggttgaa
     1441 attggtgatg cggctttagt gggtgtgcaa aaacgtttaa tccgccgtgc tcgtaagcta
     1501 aatcgtgtgg taattaccgc aacccaaatg atggaatcga tgattaaaaa accaatgccg
     1561 acccgtgctg aagtgatgga tgttgcaaat gctgtgttag atggtactga tgcggtaatg
     1621 ctttccggcg aaactgcaaa cggtgactac cctgttgaaa cggtaaaatc aatggcagaa
     1681 gtgtgcttag gtgctgaaac aatgccaagc attaacattt ctcgccaccg tatggaaggt
     1741 acgtttaaat ctatcgaaga agctgtggca atgtctgcaa tgtacaccgc aaaccattta
     1801 gaaggtgtat cggcaattat ttcattaact cattcaggcg aaacggctaa attaaccagc
     1861 cgtatcagct caggtttacc gatttatgcg atgtctcgta accaaaaagc attaaacctt
     1921 tgtgcgttat atcgtggtgt aacaccggta tattacaatg aagacagccg cacaatggaa
     1981 ggggcgaaaa aagccattgc tcaattaaaa gaacaaggct atttattaac cggcgaatta
     2041 gtgcttttaa ctcacggaga tgaattaaaa gctggcggta caaatacttg tcgtatctta
     2101 agagttgaat aatctaaacg attaacgcaa aagccacata aaacacttta tgtggctttt
     2161 tttctgtctt aatatagctt aatgtaatct gaactattga tattattatg cacaataaac
     2221 ttctttctat ctgtattctc cgcctttctg ccattggcga cgtttgccat accttagcgg
     2281 ttattcaagc tattcaacga aaatatccta gtgctgaaat tacttggatt atcggcaaaa
     2341 cggaagcgta tttaatgaaa gatattccga atgttcactt aattccttat gataaaaaaa
     2401 tagggtggaa aggtatcttt acactttggc aaaaactttc tcacaagcgg tttgattttt
     2461 tattaaattt acaaacggca ttccgagctt caattctatc gcttgggatt aaagcaaaga
     2521 aaaaaatcgg ctttaatcaa gacagagcaa gggaaatgca atggttgttt accaaccaga
     2581 aagtagaaat gacagactct cctcacgtgc ttgacgggca aatgatgttt gccaaagcca
     2641 ttgggataat ggatttatcg gcacaatgga atttacctgt gagtgatgaa gatttagctt
     2701 atggcaaaca atttattgat tttacaagga aaaatatact cattgctcct tgttcaagca
     2761 agaaagagaa agattggttg ccggaacgct atgcagaaat tgctaactgg ctaagtaagc
     2821 aaaatatcaa tgtattaatt gcaggttctc catcgcaata tgaaatggaa accgcagcca
     2881 aaattcaaca acttgccccg aattgtacga gtattgccgg taaaaccacg ctaaaacagc
     2941 ttgcaggtgt tattcgtcag gttgatttgg tgatctcttc agattcaggt cctgcccata
     3001 tcgccactac gcaaaatacg ccggtgattg ggttgtatgc gattcataat ccaagacgga
     3061 caggccctta caatgactta gacaaagtgg tttcggtata tgatgaagcg attttgcaat
     3121 cttatggtaa accttggcag caattagctt gggcaactaa agctaaaggc aaaaattgga
     3181 tggaaaaaat cacggtggag agtgtgaaac aaaaagtagt tgaaacttta aaaattacgt
     3241 tgtaaagttt gtgtattaaa agatttacac aaaaggaaat taaaatgaac acagtgttta
     3301 atcaagatag cgtgcataac gtaaatatcc aagatgaaaa ggtattactg accccacaag
     3361 agttaaaaca agaatttccg ttgccggaac atttacgcaa tcaaattgaa cgttcacgca
     3421 aaacgatttc cgatattatt cacagacgag ataaacgcca actgattgtg attggacctt
     3481 gttcgattca cgacccagtt gctgcccttg aatatggtaa aaaattaaaa gctctttcgg
     3541 agcaagtgag tgataagttg tatattgtga tgcgggttta ttttgaaaag ccccgcacta
     3601 ctgtaggttg gaaagggctg attaacgatc cgaaaatgga cggctctttt gatgtcgaaa
     3661 ccggcttacg tatcgcacga aaactctgtt tggatttagc cgaacttggc ttgccgttag
     3721 cgaccgaagc cttagatccg atgacaccac aatatttagc ggatttgttc agctggtcgg
     3781 caattggagc aagaacaact gagtctcaaa ctcaccgtga attagcctca ggtttgtcaa
     3841 tggcggtagg ctttaaaaat ggtacagatg gtgatttagc cgttgcactt aatgcgatgc
     3901 aatcttccgc tcaaagccat agctttatcg gcattaacca acaggggcaa gttactttac
     3961 tcaaaacaaa aggtaatgca gacggacata ttattttacg tggcggtaaa accccaaatt
     4021 atgaaaagca atatgttgat gattgtgaat gggtgctaaa acaagcaaac ttacctacag
     4081 cgattatgat tgattgcagc cacggcaatt ccaataaaga ttaccgccgc caaccgctgg
     4141 tggcagaaaa tgtattagag cagctacttg ctggcaatac ttcgattatc ggtttaatga
     4201 ttgaaagcaa tttacacgca ggtaatcaat catcagaatt gccgttcgag cagatgaaat
     4261 acggtgtttc tattacggat gcttgtattg actggcaaac tacagaagag cttttaactc
     4321 actttgctga aaagttgcgt taaagataat ttgcaaaaaa ttgcataaaa acgaccgctt
     4381 gtaaattggt aacaaatatg aacccattag ccccattacg agaacaaatt gatcaagttg
     4441 atcaacaact tatcgcctta ctttctgaac gcttagctct tgtggcagaa gttgggaaag
     4501 tcaaatcaga acacggcatt cctgtttatg ctccggagcg agaaaccgca atgatttccg
     4561 cccgccgctc tgaagcggaa aaacaaggta ttccggcgga tctcattgaa gatgtgctac
     4621 gccgtataat gcgtgaatct tatgccaatg aaaacaaaca cggcttcaaa agagttaatt
     4681 cggacattca aaaaatcgtg attgttggtg gtaaagggaa attaggtggg ctgtttggca
     4741 attatttaac cctatccggc tataatgttg aggcattagg acgtgatgat tgggacaatg
     4801 ccgagcagat tttagccaat gcagatgtgg ttattgtgtg tgtgccgatt gccaacaccc
     4861 tagcaaccat cgagcgttta caatcttatt taaccgaaaa tatgattttg gcggatttaa
     4921 cctccgtcaa acatcagccg ttgcaaaaaa tgctggaagt gcataatgga gcggtagtcg
     4981 gtttacaccc gatgttcgga ccggatattg caagtcaggc aaagcaagtg gtcgcttgct
     5041 gccacgggcg tttccctgaa cgttatcaat ggttgcttga gcaaatcaaa atttgggggg
     5101 caaaaattga agagattgag gcagcagcac acgataatgc aatgacctac attcaagccc
     5161 tacgccactt ttccactttt gcattcgggc tacatctttc tcgccagccg gtgcaactct
     5221 ctcaattatt ggcactatct tcgccgattt accgcttaga gttggcaatg attgggcgtt
     5281 tatttgccca agacggcagc ttatatgccg atattattgc cgataaaccg gaaaatttag
     5341 ccaccatcga aaccttaaaa gagagttttg aacaagggct agatttcttt aaacgcaacg
     5401 acaaagccgg ttttatcaag gcttttgagg aagtgcatca ctggtttggc gattattccg
     5461 agcagttctt gaaagagagt agagtattgc tccaacaggc tcacgattca agaaagtaaa
     5521 ggtaggttga ggttttgctc tgatagcact agcgtccacg ctagtgctat ttaatattct
     5581 acaagcggtt aataaagagc tgttttttgc aaatttttat gcaaaattat ccgcttgttt
     5641 tggcacgagc gtggacgctc gcgccatcgg aagaaacatt tttgtaaaat tgcccccaaa
     5701 tctgaccgct tactgtggct gaatttctcc attttttacc gtaaacaaac aatcatcgct
     5761 tctgtcttgc cattgcattt gattgagctg atcttgagta atggcggtaa cgaatacttg
     5821 tgagccactt tctcttaaac gatgtgctaa aagctcacgt ttggttgggt cgagttcgga
     5881 ggcaaaatcg tcaattaaaa ataggcattg gcgttgtttt tgggcgacca aatgttcgcc
     5941 ttgagccagt cttaacgcac acatcaatag ctttaattgc ccacgggaaa gcacatcttc
     6001 caccggtaag ccgttcgctt taaaacggaa atcggctttt tgagctccaa tcatcgtata
     6061 gccaagagct ttatcccgct caaaaccttg tgccagaatc tcggcataat ccgccccttt
     6121 ttcccagcct tgatgaaagc tcaagccgat ttcgatttcc ggcaggaaaa attggcaggt
     6181 tttctcaatt tcggggcgta acgcttcggc gtattcggct cgcatttcgc tcacggcata
     6241 agtggttttc accaattcga tatcccacgc tttgagttct tgataagagc ggacttgttg
     6301 caaagccgaa ttacgttgct ttaataaacg gcgaagattg ttccaatgag cgtagaaatc
     6361 agggtgctgg tgaaataagc cccagtccaa aaaagcacgg cgaaagctcg gaccaccgtt
     6421 aagtaaggtt aagccttcgg gggtgatcac ttgcatcggc aataaatggg ctaaatcggc
     6481 aattttgttg ccgtcttcac cgttgatttt aagtgtcgtc tcgccactgc gaaatttctg
     6541 aatgccgacc gaccaactgt gctttgcctc gtcaatttta ccgtgtagta cgaaatcgtc
     6601 tttatcgtaa tggataatgc ggttgctgat atggcttttg aatgaacgcc cgtgtccaag
     6661 atagaaaatt gattccaaca aactggtttt gccacttccg ttcgccccga ctaaaaaatt
     6721 aaaatgcggg ctaaatgcta aatcggtatg ttggatattt ctaaaatggt tgattaataa
     6781 acgggttaaa gccatagtta aagtgcgagg aataaaaaga gtagccattt tagcaaattt
     6841 gcaaaatttt gggaaaaatt aaccgcttgc ggattagaaa gtggttcagt agaataagcc
     6901 gtttattttt tattgaaaat taagaggaaa aattatgttt ggaaaaggtg gcttaggcgg
     6961 cttaatgaaa caggctcagc aaatgcaaga gcgtatgcaa aaaatgcaag aagagatcgc
     7021 ccaattagaa gtaacaggcg agtctggtgc gggtttggta aaagtcacta ttaacggggc
     7081 tcacaattgc cgccgaattg aaattgatcc atcattaatg gaagatgata aagagatggt
     7141 ggaagattta gttgccgctg cctttaacga tgcggttcgc cgtgcagaag aaatgcaaaa
     7201 agagaaaatg gcaagtgtga ctgccggtat gcaactgccg ccgggtatga aattcccatt
     7261 ctaatttaag tatgcaaacc agtcctttac ttgaaaattt gatggaagcc ttgcgtgcat
     7321 tgcccggtgt cggaccgaaa tcggcacagc gaatggctta ccatctgttg caacgtaatc
     7381 gttccggcgg tgtggcgttg tcaaaagcct taaatgaggc aatgagccat atcggacatt
     7441 gcaaatcgtg ccgtactttt accgaagagg aagagtgtac gatttgtaaa aatcctcgcc
     7501 gtcagatgag cgggcaactt tgtgtggtag aaatgccgga agacattcaa gcgattgagc
     7561 aaaccgggca attttcaggg cgttattttg tgctgatggg gcatttgtcg ccgattgatg
     7621 gtataggccc tcgtgaaatc ggcttagatt tattgcaaca acgcttggaa caggaatctt
     7681 tccacgaagt gattttggcg actaatccga ccattgaagg tgatgctacc gcaaactaca
     7741 ttgctgaaat gtgcagaatg tataacgtga aagctactcg tattgctcac ggtgtgccgg
     7801 tcggtggttc attagaaatg gttgatggca caacgctttc tcactctttt gcaggacggc
     7861 gtgatattga tatttaaagc tatttctgtg ctaacttaat tctgatataa ttactcaact
     7921 attttaaatt attattttga ggctaaaaat ggaaactatt gacaaaatca aacaacaaat
     7981 cagcgaaaat ccgattctac tttatatgaa aggttcaccg aaattcccat cttgtggttt
     8041 ctccgctcgt gcggtggaag cggtaattaa ctgccaagtg cctttcggtt atgtggatat
     8101 tttaaccaat ccggatattc gtgcggaatt gccaaaattt gcaaactggc cgactttccc
     8161 acaattatgg gtagaaggtg aattagttgg cggttgtgac atcgtattag aaatgctcca
     8221 aaaaggcgaa cttcaaacct tattaaaaga aaccgcagca aaacacgcag cataatttca
     8281 aaccagtatg ttaaggctct tatgtttaag agccttaatt ttttcttgcg atttaggctt
     8341 aaacttctta cctcaagagc tattttgttt tagaatgtca aaattatttc gtaacataaa
     8401 aataaaagga cacaacatgg cattaaaaga gttagattgg gcaaatttag gcttttctta
     8461 tatcaaaacc gattaccgtt tcattgcaca ttggaaagac ggaaaatgga atgaaggcga
     8521 attaactcaa gacaatacac tgcatattca cgaaggctca actgccctgc actatgggca
     8581 acaatgtttt gaggggttaa aagcctatcg ctgtaaagat ggctcaatta acttattccg
     8641 cccggatcaa aatgccgagc gtatgcaacg caccgcagat cgtttattaa tgccacgtgt
     8701 gccaaccgag ctgtttattc gtgcctgtaa aaaagtggta aaagccaatc aagattggtt
     8761 agggccttac ggttcggggg caacccttta tttacgtccg tttttaatcg gcgtgggcga
     8821 aaatattggg gtgaaagctg cacctgaatt tattttttcc gtattctgct gtccggtggg
     8881 ggcatatttc aaaggtggct tagcaccctc aaacttcatt acaaccgact atgaccgtgc
     8941 agccccaatg ggaacaggtg gtgtgaaagt aggcggtaac tacgctgcga gtttattacc
     9001 gcacgaattg gcggttgagc aaagttcaac tacccgtaaa tttgccgatg cgatttattt
     9061 agatccgaaa acccatacca aaattgaaga agtgggggcg gcgaacttct ttgggattac
     9121 caaagacaac aaattcatca ccccgatttc agagtcgatt ttgccaagta ttaccaaata
     9181 ctcattgcta caccttgctc aagagcgttt aggtatggaa gcgattgagg gagatgtgta
     9241 tatcgaccag ttagaccaat ttgccgaagc cggtgcttgt ggtacggctg cggtgattac
     9301 gccggttggt ggtattcaac ataaagacaa attccacgtc ttctattcag aaaccgaagt
     9361 ggggcctgtc acccgccgtt tatacgcaga attaaccggt attcaatttg gcgatgttga
     9421 agcaccgcaa ggctggattg taaaagtaga gtaattttac acaagtaaca agcggtcgaa
     9481 ttggcaaaac tttttgcaaa ttcaaccgct tgtctttatt tagagaatat gaaaaagtta
     9541 atttttttag gtttatcagc acttgcatta gctggttgtt cctcaacaat ttctaatcct
     9601 aatcaactga ttgggcaatg gcaatgcact attgagtacg atgattttaa tattcgtacg
     9661 gtggataatt tacgattttc cacaaatggg actatgacca atcaaggtgg tatatattac
     9721 cctattcaaa agtcgatttt tgagtattca ttacaacaga atgggcgctg gagtgtgaaa
     9781 aacggggcta ttgtttatcg tatcgtctca gaatctgtac agcgtagcca tcgttcacaa
     9841 atatggtctg aattacaacg tgatgcggag ctacaacaat ttgaagagaa tttatttagc
     9901 tcactttctg atagtgataa taataaaaca gtggaactaa tcatcactga ttttgatgaa
     9961 aaagaaatgg atatcaagca agaaataaaa gggcataaag cttataaagg gcaatgtata
    10021 aaacagtaga ggtaaaaatg attcaacgtt ttgaagtagg tagccgtttt tcggaaatgg
    10081 caatacataa cggtgtggct tacttggcag ggcaagtgcc gttagatgac accgccgatg
    10141 cttacaccca aacccagcaa gtgcttgcag aaattgataa atggctggca aaagccaaca
    10201 gcgataaaag taaaattcta atggctacgg tttatttaaa agagatggca gattatgcgg
    10261 aaatgaaccg tgcgtgggac gaatgggttg ccccaaataa cgctccacca agagcggcgg
    10321 tggaggctaa attagccaat ccaaattgga aagtcgaaat tgtggttacc gctgcggtat
    10381 aaatgaaaag cagaaagacg atctctgttt ttcattatga ttcgtacatt ttttcgattt
    10441 gttgcttata gcgttctaga atgacctttc gtcttaattt taatgtaggc gtaatttctt
    10501 ccattttggt gctaaatgct tgcgaaagta gtgtaaactt tttgatctgt tcaaaacttg
    10561 caaggtcttt ttgtaattcg ttaatgcgtt gttcaaacat tctgacaacc tcataatgtt
    10621 taatgagttc taatctgtct tgatagcgaa tattgagctt ttttgcatac tcttcgaggc
    10681 tatcaaagca aggaactatc aacgcagaaa catatttttt ggcatcagca atcaccgcaa
    10741 tttgctcaat aaacttatct ttacctattt ttccttcaat gtattgtggg gcaatatatt
    10801 taccgtttga agttttcatt aattctttaa tacgatcggt aatataaaga ttgccttccg
    10861 aatccagttc accggcatct cccgttttta gaaaaccttc agcagtaaag gcttgagcag
    10921 tggcttccgg ttttttgtag taacctttca taaccaagcc tccacgcact aaaatttcat
    10981 tttcttcact aattttgacc tcaacatcag gcattaaggt accggttgag ttgatattaa
    11041 agcctttttc ctgccagcat gaaatagtgg cagtagtttc ggtcattccg tatccaagtt
    11101 ttacattgat gcctatactt tggaaaaata gcccgataga cggatctaat ttagctcctc
    11161 cacacggcat catacgaata cgaccgccta gtaaggctcg taattttcct agcaccaatt
    11221 tatctgccat aatgtactgc aagcggtgga aaaaggctga ttttttacca aacagattgt
    11281 cttcggcggt acggattgcc catttaaata acgctcggcg atgtatcggt gcttgttgga
    11341 ctttatccca caccgcagta tagatttttt catagaacct tggtacggca cacattaatg
    11401 taggtcgtac cgttgagagt gcttgacgta cctgttgagg atcttccaga tagcaattta
    11461 ctgcccctct gtatagcaca taagtgaccc aagcacgttc aaagatatgc gataaaggta
    11521 aaaatgaaag ggatatatca ttttcgtcaa tatgagggag tgctttatta tgtgcctgaa
    11581 gttgatgagc taaattagca taatctaaca taacaccttt aggctcaccg gttgttcccg
    11641 aggtataaat taaagtgaat aaatcctcta agcatttatc atttaaacgt ttggttaatt
    11701 cagcttcatc ttgattaacc ttaatgaaat cttgccaatg ttgagcgata gggaaatcac
    11761 gcagatctat tgagtctttc atcgcgacaa tttttattaa tagcgaacag ttgttcgcta
    11821 tttctatggc ttgatcatat tgttcctgat cgccaacaaa gaggattttt atatccccgt
    11881 cattcaggat atattcaagt tgtttggtgg tactggttgc ataaatcggc actgctaccg
    11941 cacgaatttg cattgcagca atatcggtaa ttgtccaacg aggcatattt tgtgcaaaaa
    12001 tagcgatttt ctcttgaacg gcaagaccgt ttgccagcaa ggcataagaa agattattga
    12061 cctgtttttg taattctaac caacttattt ctgaccattt ttcatcttgc ataaaacgta
    12121 aagctgggtg gtggctaaga gcctgaactt gctggtggaa acggtggata aagtgaaaat
    12181 ctaaagtgct cataatctta tttttacttt ctatttcagt gaacagttgt acgctaatat
    12241 aatagaaaat atgaaaaaaa gaaacagttg tactctgaaa caaagggttt tggataggaa
    12301 gtaatcaagg caatagaaat agataagtag ggtatcgttt agtacaaatg caatattttt
    12361 caaaaatgag accgcttgta tatgcaacaa gcggtctgtt ttgttaaaaa ttttgcaact
    12421 aaattcgttc aatatcaaat tgagctaaat caatcacatc aggtgtaccg taaaaagcac
    12481 agagggcttt acgcaaggtt tcagctcgtt tgggaaggta gccacgttct gcatagagct
    12541 tgacttggtc gtacactgct tgtttaaagg ctgaattatc gccgggattg cccgagagat
    12601 tgtcggcact agcaaaataa cgaaaaccgg cagcagttgc taacacccat tcaatcgctt
    12661 gcggtttgat ttccgcactt tcaaattcac gttggcgttc ggcagagcgt ccgtccggct
    12721 cgtaccaata gccaaaatct tcaagtttac gccgagcttc tccagcaacg agccaatggg
    12781 caatttcgtg caaggcactg ctgtaatagc cgtgagcaaa taaaatcaca ttgtaagggc
    12841 gttcgctcgg cacaccatct tcgtccataa attcgggcaa gtaaatcgga taattacccc
    12901 cccgctctag gcgagtgtta tattcatcag aaaagcattg attaaaaatg cgaataatgt
    12961 cttcaatttt atgattttct tgattcattt cttttcttta taacttattc agccaagcta
    13021 aaaattgctc ggcatccaaa aagccagtaa cacgagattg gctcatttca ttgccgtttt
    13081 catcaaaaaa cagaatcgtt ggcaaaccta atacattaaa gtgtttcatc agctcgatat
    13141 tttcagccga gtttttcgtc atatcgattt gcaacactac catttcattc agtttgttct
    13201 gaacattttg gtcactaaag gtgtattttt caaactcttt gcaggcgaca caccagtcgg
    13261 catagagatc gagcatcact tttttacctt tggaagcggt caattttgtc tctaaatcgg
    13321 caagtgattg aattttttct aacgctaagt gcggtgtagt ttgctgttga gtggttgagc
    13381 cgttccaagc taaatctgcc caaggtttag cggcaatggc taaagcgagc aataataaga
    13441 ctttgatgat ctttttcgtg attgaattag atggaatcgc atccaccaac cagatcaaaa
    13501 atgcaaccgc aagggccgac cataaaaacg gttcatagtg gcttggcagc acacggctta
    13561 ataagaacac cggtaaggca agcataacaa aaccgaatgc agctttcact tttaacagcc
    13621 attcgccgga ttttggcaga attttgttgc cgaataaggt aatcaaaatc agcggtaagc
    13681 ccattcccag tgcgagtaga tagagggcta agccaccggt gactaaatcg ccactttgtg
    13741 ccacataaag caacgcaccg gaaagtgggg cagaagtaca aggggaagca attaagcctg
    13801 cgatcatccc cattaaaaac acgctaccca acgcaccacc ttgctgtttt tggctcattg
    13861 cattgagttt ttgttgccag ctatttggta gctggatttc gtataagcca aacattgagc
    13921 aggcaagcag aataaagacg atagataaac caatcaacac cggtgggctt tgtaaggcga
    13981 tttggaaagg caagccgata gccgctacaa ttaagccaag taaggtgtaa gtaactgcca
    14041 ttccttgcac ataggcaata cttaacagca atgctttagc ggtagaaggg cgttgcttat
    14101 ttccaattac aatcgcagag agaagtggta gcatcggcag tacgcaagga gtgaatgcta
    14161 atccaacgcc taatacaaaa aaccaaaaaa tggaaaaacg attgttagct aaattttcag
    14221 ccagttgatc ttgctctgct tttgccacat tttcaggggg cgccatattg tcggtttttg
    14281 caaaattttc gctcttttcg accgcttgtg cttccagttg cgccagttct tcaggtgtag
    14341 cagagagaat actgtctaat ttaagctcaa cccgttccgg tggatagcaa aagcctttgg
    14401 tacacccttg atattccact acgattgagg cgttgtcttt aatttcttta aacggtacct
    14461 ttagccctaa gtggttgcga tagatttcca cctgcccgaa aaattcatcg ttatattgct
    14521 cggcagcggg aaaagtgatg tcgcctatct caatattctg tggcgtgaca cggatttctt
    14581 ttttataaag ataataattg tctgcaatat cccaatttaa ctgtaatgtt tcattttcat
    14641 tttggattga aaaaacaaag gcttcttccg attttaggaa tttgggttga gagaaaagat
    14701 ttgcgtgaga tgagtttatc atcaataaac tcaagacgag tgaaaaaaag tatctaatca
    14761 tattga
//
LOCUS       DANLZQ010000068        14683 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.068, whole genome shotgun sequence.
ACCESSION   DANLZQ010000068 DANLZQ010000000
VERSION     DANLZQ010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 14683)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14683)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14683
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.068"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            55..327
                     /locus_tag="PXE50_001719"
     CDS             55..327
                     /locus_tag="PXE50_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005709555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HDL5622620.1"
                     /translation="MKKGIHPENYREVLFYDASVQQGWVIRSCAATNKTMVWEDGKEY
                     PLYTLDTSSASHPVYTGKRREVNTEGRASQFKDRFKGFASTLSNQK"
     gene            336..461
                     /gene="ykgO"
                     /locus_tag="PXE50_001720"
     CDS             336..461
                     /gene="ykgO"
                     /locus_tag="PXE50_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HDL5622621.1"
                     /translation="MKILNSLKTAKSRHPDCQIVRRKGKLYVICKTNPRFKARQR"
     gene            641..1414
                     /locus_tag="PXE50_001721"
     CDS             641..1414
                     /locus_tag="PXE50_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL5622622.1"
                     /translation="MLKKLSIAALALTLSVSAFAKESLLERINNKGTITVGTEGTYAP
                     YTYHDASGKLTGYDVEVTRAVAEKLDVKVEFKETQWDAMLAGLKGERFDLVANQVALT
                     SPERRATFDKSESYSWDGAALLVREDETKIKTPADVKGVKTAQTLSSNYGEIARENGA
                     DIVPIDGMAQGLLLIQQKRADATFNSHLSLLDYLKKNPNSGLKIVWEKEEKVGAGLIA
                     NKGNDEALAKISKAIVELREDGTLKKLGEQFFGKDISVQ"
     gene            1497..2213
                     /locus_tag="PXE50_001722"
     CDS             1497..2213
                     /locus_tag="PXE50_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDL5622623.1"
                     /translation="MLNDLLLSIPFMTQARVDLVLSGFWPMVQAAFLVSIPLAIASFI
                     IGMLIAVAVALVRISPATGFFHRLLLWLVKGYISIIRGTPMLVQICIVFYGLPAIGIF
                     IDPIPAAIIGFSLNIGAYGSETIRAAISSVPKGQWEAGYTIGMTYMQTFRRIIAPQAF
                     RVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQVANMSYDFLPVYIEAGLIYWCFC
                     WVLFLIQARLEVRFNRFVAK"
     gene            2223..2975
                     /locus_tag="PXE50_001723"
     CDS             2223..2975
                     /locus_tag="PXE50_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDL5622624.1"
                     /translation="MLKIRNIHKTFGNNAILRGIDLDIQKGQVVVILGPSGSGKTTFL
                     RCLNALEMPEQGTLEFSGNAPLKIDFAVKQSKKEILALRRKSGMVFQNYNLFPHKTAL
                     ENVMEGPVFVQQQAVEIAQKNAKALLEKVGLADKAELYPFQLSGGQQQRVGIARALAI
                     QPELMLFDEPTSALDPELVQDVLNTMKELANEGWTMVVVTHEIKFALDVADVVVVMDG
                     GEIVEQGSPQQLFNHPQHERTKRFLNQIRADK"
     gene            complement(3191..3724)
                     /locus_tag="PXE50_001724"
     CDS             complement(3191..3724)
                     /locus_tag="PXE50_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HDL5622625.1"
                     /translation="MEFLAPVISLIVGFLSFVLVLRTWLQFCRVDPRLPISQTLLKIT
                     EPMVSPVGKLIPTVKNICFPALLIAAALVTLQFILFGVDLPRAVLIGLLSVVKTFGQI
                     LFFTTLIRALMSWVTQGNHPLDYTVAQITEPVLGFIRKLLPRTGMLDFSVMVLGFGLL
                     LLNSLFYQIFGGLWAAA"
     gene            complement(3830..4171)
                     /locus_tag="PXE50_001725"
     CDS             complement(3830..4171)
                     /locus_tag="PXE50_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggL family protein"
                     /protein_id="HDL5622626.1"
                     /translation="MAIQRNARQRKKMHLGEYQELGFLIKFTFAEGTGIDQIDETVDR
                     FIDEVIRPNGLALEANGYLNWEGLVCLEKLGKCDESHRQLVKTWLETNGLKEVQVSEL
                     FDIWWDYPAQA"
     gene            complement(4195..4944)
                     /gene="trmB"
                     /locus_tag="PXE50_001726"
     CDS             complement(4195..4944)
                     /gene="trmB"
                     /locus_tag="PXE50_001726"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HDL5622627.1"
                     /translation="MSEKQTFADKKRKTVEQAEFTEDGRYLRKVRSFVLRTGRLSDYQ
                     RDMMNNNWANLGLDYQPMPFNFEQIFGNNNPVVLEIGFGMGKSLVEMAEQNPNRNYIG
                     IEVHTPGVGACIAYALEKGVKNLRVICHDATEILRDSIADGTLGGLQLYFPDPWQKAK
                     HHKRRIVQPEFISRVIRKLSPNGFIHFATDWENYAEHMLEVLRQFESELQNTSATNDF
                     IPRPNFRPLTKFEERGHRLGHGVWDLYFTKK"
     gene            complement(4954..5904)
                     /locus_tag="PXE50_001727"
     CDS             complement(4954..5904)
                     /locus_tag="PXE50_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000288132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HDL5622628.1"
                     /translation="MNSRILATGSYLPTKVRTNADLEKMVDTSDEWIVTRSGIRERRI
                     AEPDETVATMGAKAAQQALEMAGIEANDIDLIVVGTTTNSHAYPSAACQIQGLLQIED
                     AIAFDVAAACTGFVYALTVADQFVRNGQVKKALVIGSDINSRMLDETDRSTVVLFGDG
                     AGAVILEASEELGIISTHLHASPDLENNLTLRSQKRGEERSGFIEMQGNATFKIAVNQ
                     LSSVVEETLEANNLQKSDLDWLIPHQANLRIITATAKKLEMEMDQVVVTLDKYANTSG
                     ATVPVALDEAVRDGRIQRGQLLLLEAFGGGWTWGSVLVKF"
     gene            complement(6050..7069)
                     /gene="hemB"
                     /locus_tag="PXE50_001728"
     CDS             complement(6050..7069)
                     /gene="hemB"
                     /locus_tag="PXE50_001728"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HDL5622629.1"
                     /translation="MQVIQSQYPLRRMRRLRKHDFSRRLVAENQLTVNDLIYPVFVIE
                     GENQRVQVPSMPGVERLTIDQLLVEAAELVKYGVPAVALFPVVGDVKKSLMAEEAYNP
                     QGLAQRAVRALKAQFPELGVITDVALDPFTTHGQDGIIDETGYVLNDVTTEVLVKQAL
                     SHAEAGADIVAPSDMMDGRIGKIREALEQNGFINTQIMAYSAKYASNYYGPFRDAVGS
                     AGNLKGGNKYTYQVDPANGNEGLHEVAMDIQEGADMVMVKPGMPYLDMVWRVKENFGV
                     PTFAYQVSGEYAMHMAAIQNGWLKERECIMEGLLCFKRAGADGILTYFAKRVAKWLYE
                     EAQAK"
     gene            complement(7150..7905)
                     /gene="tatC"
                     /locus_tag="PXE50_001729"
     CDS             complement(7150..7905)
                     /gene="tatC"
                     /locus_tag="PXE50_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HDL5622630.1"
                     /translation="MSQVDESQPLITHLIELRNRLLRSFICVLLVFCGLVYWANDIYT
                     LLATPLTDNLPDGATMIATNVATPFFTPIKLTIVVSVFLSVPFILYQIWAFVAPALYK
                     QEKRLVYPLLVSSTLLFYCGVAFAYYVVFPLVFGFLTSTAPEGVTMATDISSYLDFVL
                     TIFMAFGICFEVPVAIILLCWAGVTTPEDLKAKRPYIIVAAFVIGMLLTPPDIFSQTL
                     LAIPMCLLFEVGVLFARFYRPKDDDEPSEQVAQ"
     gene            complement(7892..8536)
                     /gene="tatB"
                     /locus_tag="PXE50_001730"
     CDS             complement(7892..8536)
                     /gene="tatB"
                     /locus_tag="PXE50_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatB"
                     /protein_id="HDL5622631.1"
                     /translation="MFDIGFSELVLIMIVGLVVLGPKRMPIAIRTVMGWVSTIRGLAA
                     NVQNELAQELKLQELKESIKKAEELNLSSLSPELNKTVEDLKMSATQLQDSLNSAKNE
                     LEKTAAESSTIPKLTDEQVAEIQQKIEQESQVLEAQELQKNAQNKPLEVDSLSEQLNV
                     TRTEKPLSADELAEQAEMDESLLTLESYYPPDDDLATPQSSESAQKSEANNVAS"
     gene            complement(8540..8761)
                     /gene="tatA"
                     /locus_tag="PXE50_001731"
     CDS             complement(8540..8761)
                     /gene="tatA"
                     /locus_tag="PXE50_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HDL5622632.1"
                     /translation="MGGISIWQLLIVVAIIVLLFGTKKLRTLGSDLGESVKGFKKAMA
                     DEKKDAEFEKVEAKDAISAEQKAKEKEQA"
     gene            complement(8872..10509)
                     /gene="ubiB"
                     /locus_tag="PXE50_001732"
     CDS             complement(8872..10509)
                     /gene="ubiB"
                     /locus_tag="PXE50_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HDL5622633.1"
                     /translation="MNIKNLNRFYHIIRTFLRYGIDEAIPNLPITRKIKLGRKALFWV
                     KNQHSDKPYGVRLRLALQELGPVWIKLGQMLATRRDLFAPELADQLALLQDNVEPFDG
                     KIARQIIEQALGGKLETWFENFDETALASASIAQVHTAKFNQNQPLAGKDVVLKVIRP
                     GIEPVIKADLELMYEIAHFIPKLSNDGKRLRAVEVVREYEKTILDELDLRKEMHNAIR
                     LRANFENSEMLYVPEMYQDFCHKNLIAMERIYGIPVSNIAELEANSTDMKLLAERGVQ
                     VFFTQVFRDSFFHADMHAGNIFVNREHPENPQYIGIDCGIVGTLNHNDKRYLAESFVA
                     FFNRDYRRVALMHVESGWTPPDTDIDKFEQAFREVCEPIFAKPLSEISFGHVLLNLFN
                     VAREFNMEVQPQLVLLQKTLLYIEGLGRQVYPQLDLWQTAKPFLQNWLNEQVGVKAMV
                     RDIKQRLPQYREHFAEFPEALFKALQEQKQINFRLAEINESLKAQNSNANSRFLVLSI
                     SAIVICGAFWKFESLPIWLSVPLLTLFPLVLILSQRK"
     gene            complement(10583..11560)
                     /locus_tag="PXE50_001733"
     CDS             complement(10583..11560)
                     /locus_tag="PXE50_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005825116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1016 family protein"
                     /protein_id="HDL5622634.1"
                     /translation="MKQIIAQARENAVRAVDFQRVLMYWHIGKRIFEQEQQGQERADY
                     GTYLIKMLAKELEPEFGSGFCSRQLERYRQFYRAFPIATALRSQLNWTQYRRLIQISD
                     SDKREFYLAESCKNNWSSRQLERQINSSLYERLLLSNDKESVLAVARNEQQPVDPKQL
                     IKDPMVLEFLGLKRESAYYEKDLEQAIITHLQDFLLELGNGFSFIARQKRLHLDGDDF
                     FVDLVCYNRLLQCFVIFEIKTHKLTHQDLGQLQMYVNYFDRVEKLPHENATIGVLLCA
                     DKNDAVVKFSLPENQNKIFASQYQLYLPSEQTLIAEVQKEIENFEQKYP"
     gene            complement(11721..12368)
                     /locus_tag="PXE50_001734"
     CDS             complement(11721..12368)
                     /locus_tag="PXE50_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 sterol-binding domain-containing protein"
                     /protein_id="HDL5622635.1"
                     /translation="MLNNVKQQLMLPQFTFGLIETAFNALLKRSPHIEPNLRKLSGKV
                     LKIALTSPKIDFFVLFSESRTDWLGNYEGEADCTVQLAFDTLPKLADKQKLTELINNK
                     SLVLTGDIQVLQHFTALLEQLEKDPAELLSPFVGDVVAQTSTDLAKKLLGKVKAQFEQ
                     NNQHLVENLIQERPVLVHRLQAVHFYDQVEELAQQALKLEQKFTHYVRSSSHQQS"
     gene            complement(12559..13311)
                     /gene="ubiE"
                     /locus_tag="PXE50_001735"
     CDS             complement(12559..13311)
                     /gene="ubiE"
                     /locus_tag="PXE50_001735"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015433517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HDL5622636.1"
                     /translation="MQQSAETTHFGFKTVAKEEKQQLVANVFHSVAGKYDLMNDLLSF
                     GIHRVWKRFTIDCSGVRKGQKVLDLAGGTGDFTAKFSRIVGESGEVILADINSSMLEV
                     GREKLRNLGVVGNVSYVQANAECLPFADNTFDCIVISFGLRNVTDKDKALRSMFRVLK
                     PGGRLLVLEFSKPIIDPISQLYNFYSFNILPKVGEVVVNDAESYRYLAESIRMHPKQD
                     ELKAMMEQTGFESVNYYNLSAGIVALHRGYKF"
     gene            13656..14609
                     /gene="corA"
                     /locus_tag="PXE50_001736"
     CDS             13656..14609
                     /gene="corA"
                     /locus_tag="PXE50_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HDL5622637.1"
                     /translation="MIRAFGLDNACLISVDETNPTLLNDAIWIDLIDPSEAERTVLEN
                     RLDQTLAEERELEDLEASARFFEDEDGLHLHSFFYCLDDDDYADIATVAFTIRDGRLF
                     TLRDRDLPAFRLYRMRSRREKLIDSNAYELLLDLFETKIEQLADVIEEVYADLEKLSR
                     VILNGQQENENFNDALSRLTEFEDASSKVRLCLMDTQRALSFLLRKTRLPNNQLEQAR
                     DIMRDIESLQPHNESLFQKVNFLMQAAMGYINIEQNRIMKFFSVVSVMFLPATLVAST
                     YGMNFEFMPELHFQYGYPMAIGLMIVAASAPYLYFKRKGWL"
BASE COUNT         4190 a         3275 c         2864 g         4354 t
ORIGIN      
        1 tgtatcccat attttaatta tggttaatga ccttatctaa attctggaga aaatatgaaa
       61 aaagggattc atcctgaaaa ttatcgtgaa gtgttgttct atgatgcctc agtgcaacaa
      121 ggctgggtta tccgttcttg tgcggcaacc aacaaaacaa tggtatggga agatggcaaa
      181 gaatacccac tttacacctt agatacctca tcggcgtctc accctgttta cacaggtaaa
      241 cgccgtgaag tgaatacaga aggtcgtgca agtcaattta aagatagatt taaaggcttt
      301 gcttcaacgc tttcaaatca aaaatagagg ataaaatgaa aatcttaaac tcacttaaaa
      361 ccgcaaaatc acgccacccg gattgccaaa ttgtcagacg caaaggcaaa ctttatgtga
      421 tttgcaaaac caacccgaga tttaaagctc gtcagcgtta aaaaccagca ccttaataag
      481 ctaatttatt aaggtgtttt ttatttcatc ttctcaatat tacctatttt aaccacatca
      541 acgattttat tatttcttat tccatttagt tatttgcaag cggtcaattt tccccttaaa
      601 tttgcaaaaa atttatttta ccaattaaaa ggaaatgatt atgttgaaaa aattatcaat
      661 tgctgcatta gctcttaccc tttctgtttc tgcatttgct aaagagagcc tacttgagcg
      721 tataaacaac aaagggacta ttactgtggg tacggaagga acttatgccc cttacaccta
      781 tcacgatgcg agcggtaaat taaccggtta cgatgtagaa gtaacccgtg cggtggctga
      841 aaaattagac gtaaaagtgg aatttaaaga gacacaatgg gacgctatgt tagccggttt
      901 aaaaggtgag cgttttgact tagtggcaaa ccaagtggct ttaaccagcc cggaacgtcg
      961 agcgacattt gataaatccg aatcttacag ctgggacggt gccgccttat tagtgcgtga
     1021 agatgaaact aaaatcaaaa cccctgctga tgtaaaaggc gtgaaaactg cccaaacctt
     1081 gagctcaaac tatggcgaga ttgcccgtga aaacggtgca gacatcgtgc caattgacgg
     1141 tatggctcaa ggcttactgt taattcaaca aaaacgcgcc gatgcaactt tcaatagcca
     1201 cttatcgcta ttagattact tgaaaaagaa cccgaattcc ggcttaaaaa ttgtgtggga
     1261 aaaagaagaa aaagtgggtg caggcttaat tgcgaataaa ggcaatgacg aagcattagc
     1321 gaaaatcagc aaagcaatcg tagaattacg tgaagacggc acgttaaaaa aattgggcga
     1381 gcagttcttc ggtaaagata ttagtgtaca ataatccata ttggattagg cttggggcga
     1441 attcgcccct tttattttta aatctccctc aaaacgggag attttaggtt tttcagatgt
     1501 taaacgatct acttctctca atccccttta tgacccaagc tcgggtcgat ttagtgctaa
     1561 gcggtttttg gccgatggta caagcggcat ttttagtctc tattccgctg gcaatcgcct
     1621 catttattat cggtatgtta attgccgttg cagttgcatt agtgcgaatt agccctgcaa
     1681 caggcttttt tcaccgcttg ctactgtggc tggtaaaagg ttatatctcg attattcgcg
     1741 gcacgccgat gttggttcag atctgtattg tgttttatgg tttgcctgca atcggcattt
     1801 ttatcgatcc gattccggcg gcaattatcg ggttttcact caatatcggg gcttatggct
     1861 cggaaacgat ccgtgctgcg atctcctccg tgccaaaagg acaatgggaa gccggttata
     1921 ctatcggtat gacttatatg caaacttttc gccgtatcat tgccccgcaa gcgtttcgag
     1981 ttgctgttcc gccacttagc aacaccttta tcggtctgtt taaagatacc tctcttgcct
     2041 ccgttgttac cgtaaccgaa atgttccggg ttgctcaaca ggtagcaaat atgtcttatg
     2101 acttcctacc tgtttatatt gaagccggtt tgatttattg gtgcttctgc tgggtgctat
     2161 ttttaattca ggcgagattg gaagtccgct ttaaccgatt tgtggcgaaa taaggaggaa
     2221 ttgtgcttaa aattcgcaat attcataaaa cctttggcaa caacgctatt ctacgcggca
     2281 ttgatttaga tattcaaaaa gggcaagtgg tagtaatttt aggcccttcc ggttcaggca
     2341 aaaccacctt tcttcgttgc ttaaatgcac tggaaatgcc cgagcaaggc acattggaat
     2401 ttagtggtaa tgctccgctg aaaattgatt ttgccgtaaa acagagcaaa aaagagattt
     2461 tagcgctacg ccgcaaatcc ggtatggtgt tccaaaacta caacctgttc ccgcataaaa
     2521 ccgcattgga aaatgtgatg gaaggaccgg tatttgtgca acaacaagcg gtcgaaattg
     2581 ctcaaaaaaa tgcaaaagcc ctgttagaaa aagtcggact ggcggataaa gcagaactct
     2641 acccgtttca actgtcaggc gggcaacagc aacgggttgg cattgcacga gcattagcaa
     2701 ttcagccgga gctgatgtta tttgatgaac caacttcggc acttgatcct gagttagtgc
     2761 aagacgtgct aaatacgatg aaagaactgg caaatgaagg ctggacaatg gtcgtggtta
     2821 ctcacgaaat caaatttgcc cttgatgttg ccgatgtagt ggtggtaatg gacggcggtg
     2881 aaatcgttga acaaggctcg ccacagcaac tgtttaacca cccacaacac gaacgaacta
     2941 aacgtttttt aaatcaaatc agagcggata aataagaaac gatagcgcta gcgtccacgc
     3001 tagtgctatc taataaatgg tacaagcggt taattatgta taaattgtta tactgttttg
     3061 gcacgagcgt ggacgctcgc gccatcgtac agtaaaatca gctaacaagg ttccccataa
     3121 aggataaata agacaaggct ccttaatctt ttagattaag gagcttattt ttagatttta
     3181 gaaatccgat ttaagccgca gcccatagtc caccaaaaat ttggtagaac aagctattta
     3241 gtagcaataa gccgaaacct agcaccatta ccgagaaatc taacattccc gttcttggca
     3301 ggagcttgcg gataaaacct aacaccggtt cggtaatttg tgctaccgtg tagtctaatg
     3361 ggtggttgcc ttgagtgacc cagctcatta atgcacgaat caaggtggtg aaaaatagaa
     3421 tttgtccgaa ggttttgacc acacttaata agccgattaa tactgctctg ggtaaatcta
     3481 cgccaaacag aataaactgt aacgttacca aagcggcggc aattaatagt gccggaaagc
     3541 aaatattttt aacggttgga atcagcttgc caaccggtga aaccatcggt tcggtaattt
     3601 taagtaaggt ttgtgaaatc ggtaaacgag gatcaacccg acaaaattgc agccaagttc
     3661 ttagcaccag cacaaaactt aaaaagccaa caataagcga aataacagga gctaaaaatt
     3721 ccatctcttt ttctctttct atacaaaaca agcggtcgtt ttttagaaaa aatttgcaaa
     3781 ttttcagtaa aatctgaccg cttgtatctt attaaattaa ctaggcaaat taagcttgtg
     3841 ctgggtagtc ccaccaaata tcaaataatt cgctcacttg aacctctttt aagccgttag
     3901 tttctaacca agttttcact aattggcggt gagattcatc acatttgcct aatttttcta
     3961 agcagactaa accttcccag tttaagtagc cgttcgcttc aagggctaaa ccgtttggtc
     4021 gaatcacttc atcgataaaa cgatctacgg tttcatcaat ttggtcaatg cctgtgcctt
     4081 cagcaaaggt gaatttaatt aagaaaccta attcttggta ttcacctaag tgcatttttt
     4141 tacgttggcg tgcgttacgt tgaatagcca ttttttctct cctctatgaa taaatcattt
     4201 ctttgtaaaa tataaatccc acaccccgtg tcctaaacga tgccctcgct cttcaaattt
     4261 ggttagcggg cggaaattcg gacgtggaat aaaatcatta gttgctgatg tattttgcaa
     4321 ctcgctctca aattggcgta atacttcaag catatgttct gcgtaatttt cccagtcggt
     4381 ggcaaaatga ataaagccgt tagggcttaa ttttctgatc acacggctga taaattcagg
     4441 ctgcacaata cggcgtttgt ggtgttttgc tttttgccaa gggtctggga agtaaagctg
     4501 taagccacct aatgtaccgt cagcaatgct gtctcgcaaa atttcggtgg catcgtggca
     4561 aattactctt aaattcttca cgcctttttc taacgcataa gcgatacaag cccccacccc
     4621 gggcgtgtgc acctcaatgc cgatatagtt gcgattcggg ttttgctctg ccatttccac
     4681 cagcgatttt cccattccga agccgatttc taacactacc gggttgttat tgccgaaaat
     4741 ctgctcaaaa ttaaagggca ttggctggta atctaagcct aaatttgccc agttgttgtt
     4801 catcatatca cgttgataat cgctcaaacg accggtacgc aatacaaaac tccgcacttt
     4861 tcgtaaataa cgcccatctt cggtaaactc ggcttgctca acggttttac gttttttatc
     4921 tgcaaaagtc tgtttttctg acattttctt gccttaaaac ttcactaata ccgaacccca
     4981 agtccagcca ccgccgaatg cttcaaggag tagtaattgc ccacgttgaa ttcgcccgtc
     5041 acgcaccgct tcatctaatg ccaccggcac tgttgctcca ctggtattgg catatttatc
     5101 aagggtaacc accacttgat ccatttccat ctctaatttt ttcgccgttg cggtgataat
     5161 gcgtaaattc gcttggtgcg gaatcagcca atctaaatcg gatttttgta gattattcgc
     5221 ttctaaggtt tcttctacca cgcttgaaag ttggtttact gcaattttaa aggtggcatt
     5281 gccctgcatt tcaataaagc cggaacgctc ttcgccacgc ttttggcttc ttaaggttaa
     5341 gttattttct aaatccggtg aggcgtgcaa gtgggttgaa ataataccca gctcttcact
     5401 cgcctctaaa atcaccgccc cagctccgtc accaaataat actactgtgc tgcggtcggt
     5461 ttcgtctaac attctggaat tgatgtctga accaataacc aatgcctttt tcacttgccc
     5521 gttacgcacg aattgatcgg caacagttaa agcatacaca aatcctgtac aagccgctgc
     5581 cacatcaaaa gcaatcgcgt cttcaatctg aagcaagcct tgaatttggc aagctgcact
     5641 tgggtaagcg tgggagttgg tagttgttcc caccacaatt aaatcaatgt catttgcctc
     5701 aattcctgcc atttccagtg cttgttgagc ggcttttgcc cccattgttg ccactgtttc
     5761 gtcaggctcg gcaatacggc gttcacgaat gccggaacgg gttacgatcc attcatcaga
     5821 ggtatcgacc attttttcta aatcagcatt ggtacgcacc tttgtcggta aatagcttcc
     5881 cgttgctaaa attctactat tcatattttt attattctca atcaattaaa tgataatccg
     5941 ttattatagc ttgaaaacca acaaatatat aggctttaca agcggtcatt tttagcaaaa
     6001 aagttgcatt cacgaacgat tttgcactag aaccaccgct tgctagtatt tatttcgctt
     6061 gagcctcttc gtatagccac ttcgctactc gcttggcgaa ataagttaga ataccgtctg
     6121 ctcctgcccg tttaaagcag agtaatccct ccataatgca ctcacgctct ttcagccagc
     6181 cgttttggat tgccgccata tgcatcgcgt attcgcccga aacttggtag gcgaaggttg
     6241 gcacgccaaa attctctttc acacgccaca ccatatccaa ataaggcata cccggtttca
     6301 ccatcaccat atctgcccct tcttgaatat ccatcgccac ttcgtgcaag ccttcgttgc
     6361 cgttagccgg atcgacttgg taagtgtatt tattaccgcc ttttaagttg ccggcagaac
     6421 ctactgcatc acggaacggt ccgtaataat tagacgcata tttagccgaa tacgccataa
     6481 tttgcgtatt gataaaaccg ttttgctcaa gggcttcacg aattttgccg attcgaccgt
     6541 ccatcatatc gctcggggca acaatatccg cccccgcttc tgcgtgcgat aacgcctgtt
     6601 ttaccaatac ttcagtagtc acatcattca gtacatagcc tgtttcatca ataatgccgt
     6661 cttgtccgtg cgtggtaaac gggtctaacg ccacatcagt aatcacgcct aattccggaa
     6721 attgagcttt taaagctcgc acggcacgct gtgccaaccc ttgcgggtta taggcctctt
     6781 ctgccatcag tgattttttc acatcaccca ccacagggaa aagagccacc gcaggcacgc
     6841 catatttaac cagttctgcg gcttcaacta aaagctggtc gatagttaaa cgctctacac
     6901 ccggcataga aggcacttgt actcgctgat tttccccttc gatgacaaaa acagggtaaa
     6961 tcaaatcatt aacggtaagt tgattttctg ccactaagcg gcggctgaaa tcgtgcttgc
     7021 gtaaacgacg catacggcgt aaaggatatt gggattgaat tacttgcatt tttaatttcc
     7081 taattcttaa aatacctatt cttgaaataa gaaaggcata gcaaacaggt gctatgcctt
     7141 ttcaaaatat tactgtgcaa cctgctctga tggttcatca tcatctttgg ggcgataaaa
     7201 ccgagcaaat agcacaccaa cttcaaacaa taaacacatt ggaattgcca ataatgtttg
     7261 cgagaaaata tctggtgggg tgagcaacat accaattaca aatgctgcca caataatata
     7321 agggcgtttt gcctttaaat cttcgggtgt ggttacgcct gcccaacata acaagataat
     7381 cgcaaccggc acttcaaagc agatcccgaa tgccataaaa atggttaaaa cgaaatcaag
     7441 atagctacta atatccgttg ccattgttac cccttccgga gcggtagagg ttaaaaagcc
     7501 aaatacaagc ggaaatacaa cataataggc aaaagcgaca ccacaataaa acagcaatgt
     7561 gctagatacc aataatgggt aaaccaaacg cttttcctgc ttgtataaag caggggcgac
     7621 aaacgcccaa atttggtaca aaataaaagg aactgataaa aacaccgaaa ccacaatggt
     7681 taatttaatt ggggtaaaaa acggagtggc tacattggtt gcaatcattg ttgcaccgtc
     7741 tggtaaattg tccgttaaag gtgttgccaa taaggtgtaa atatcattgg cccagtaaac
     7801 caatccgcaa aacaccaaga gcacacagat aaaactacgc agtaatcggt ttctcagctc
     7861 aattaaatgt gtaatcagag gttgagactc atcaacttgc gacattattt gcctccgatt
     7921 tctgcgctga ttctgatgat tgaggcgtag ctaaatcatc atctggcgga tagtaagatt
     7981 ccaacgttaa aagcgattcg tccatttctg cttgttcagc cagctcatca gccgaaagtg
     8041 gcttttctgt ccgcgtaaca ttaagttgct cagataaact atccacttca agcggtttat
     8101 tttgcgcatt tttttgcaat tcttgcgcct ctaacacctg gctttcttgc tcgatttttt
     8161 gctgaatttc tgcgacttgc tcatcggtta atttaggaat tgtgctgctt tccgcagccg
     8221 ttttttccaa ctcatttttt gcagaattaa gcgaatcttg caactgggtg gctgacattt
     8281 tcagatcttc caccgtttta tttaattctg gcgaaaggga gcttaaattc aactcttctg
     8341 cctttttaat gctctctttt aattcttgca gtttcagctc ttgagccagt tcattttgta
     8401 cgtttgcggc taaacctcga attgtactca cccagcccat tacggtacga atcgcaatcg
     8461 gcatacgttt cgggcctagc accaccaagc ccacaatcat aatcagtact aattcagaaa
     8521 aacctatatc aaacacggat taagcctgct ctttctcttt tgctttctgc tctgctgaaa
     8581 ttgcatcttt tgcttccact ttttcaaatt cagcatcttt tttctcatct gccattgctt
     8641 ttttgaagcc ttttacagat tcgcccaaat ccgaacctaa agtacgtaat ttcttcgtac
     8701 cgaaaagtaa tacgatgatt gcaaccacaa tcagaagctg ccaaatacta ataccgccca
     8761 taaaaactcc tttcatttaa tagggaatag ataaaataaa acgctgttta ttatatgtta
     8821 ctttgacata taaaaaagta attttgcaaa aaatttgtca aaaacaaccg cttatttgcg
     8881 ttgactcaaa atcaatacca gtggaaataa agttaataac ggcacactta gccatatcgg
     8941 caaagattca aatttccaaa atgcgccaca gatcacaatc gctgaaattg acagcacaag
     9001 aaaacggcta tttgcgtttg aattctgtgc ttttaaactt tcgttaattt ccgctaaacg
     9061 gaaattaatt tgcttttgct cttgtaaggc tttaaacaat gcctccggaa actccgcaaa
     9121 atgctcccga tattgcggta aacgttgctt aatgtctcga accatcgctt tcacacctac
     9181 ctgctcattc agccagtttt gtaaaaacgg ttttgcggtt tgccataaat ccaactgtgg
     9241 ataaacctgc ctgcccaaac cttcaatata aagaagtgtt ttttgcaaca acaccaactg
     9301 cggctgcact tccatattaa attctcttgc cacattaaac aggttgagca aaacgtgtcc
     9361 gaatgaaatt tccgataacg gcttagcaaa aatcggctca catacctcac gaaaggcttg
     9421 ctcaaattta tcaatatcgg tatccggcgg cgtccagccc gattccacgt gcattaaggc
     9481 aacacggcgg taatctcggt tgaaaaatgc gacaaaactt tcggctaaat agcgtttgtc
     9541 attgtggttc aacgtgccga caatcccgca gtcaatgccg atatattgcg gattttccgg
     9601 gtgttctctg ttcacaaaaa tattgccggc gtgcatatcg gcgtggaaaa aactgtcacg
     9661 gaatacttgg gtaaaaaata cctgcacacc acgctctgcc agcaatttca tatcggtgct
     9721 gttcgcttcc aactcggcaa tgttagacac tggaatgcca taaatccgct ccatcgcaat
     9781 caagttttta tggcaaaaat cttgatacat ttcaggcaca tacagcattt cgctattttc
     9841 aaaattcgcc cgaagccgaa tggcattgtg catttctttg cgtaaatcca gctcgtctaa
     9901 aatagttttt tcgtactctc gcaccacttc aaccgcccgt agccgtttgc cgtcattcga
     9961 taatttcggg ataaagtgag caatttcata catcaactct aaatccgcct taatcaccgg
    10021 ctcaatgccc gggcgaatca cttttaacac cacatctttg cctgcaagcg gttgattttg
    10081 gttaaatttt gccgtgtgaa cctgtgcaat cgaagcagaa gctaaggcag tttcatcaaa
    10141 gttttcaaac caagtttcaa gctttccgcc caaagcctgc tcgataattt gacgagcgat
    10201 tttgccgtca aacggttcaa cattatcttg tagcaaggcg agctggtcgg caagctccgg
    10261 tgcaaacaga tcacgtctgg tagctaacat ttgcccgagc ttgatccaaa ccggtccaag
    10321 ctcttgcaaa gccaaacgta aacgtacacc gtaaggtttg tctgaatgtt gattcttcac
    10381 ccaaaacaaa gccttacgcc ctagctttat tttgcgggta attggcagat tcggaatggc
    10441 ttcatcaata ccatagcgaa gaaaagtgcg gataatatgg taaaagcggt tgagattttt
    10501 gatgttcatt gaaatatata tttaatggta attaggaaga ttttagcaaa attctgtaaa
    10561 aatttaaccg cttgttgggc tactatgggt atttctgctc aaaattctca atttctttct
    10621 gtacttccgc aataagtgtt tgttcagagg ggaggtaaag ttggtattgg ctggcaaaaa
    10681 ttttattctg attttccggt agcgaaaatt ttaccaccgc atcattttta tcggcacaaa
    10741 gcaagacacc aatagtggca ttttcgtgcg gcagtttttc aactcggtca aaataattga
    10801 cgtacatctg taattgcccc aaatcttgat gggtgagctt gtgggtttta atttcaaaaa
    10861 tcacaaaaca ttgaagtaaa cggttgtaac aaaccaaatc gacaaaaaaa tcatcaccgt
    10921 ctaggtgcaa acgcttttgg cgtgcgataa acgagaaacc gttacccaat tctagtagaa
    10981 aatcctgcaa atgcgtaatg atggcttgct ctaaatcctt ttcgtaataa gcactttccc
    11041 gttttagtcc gagaaattcc aataccatcg ggtctttaat gagctgtttc ggatcaaccg
    11101 gctgctgctc atttctggca acagcaagca cactttcctt atcattactg agcaataatc
    11161 gctcgtatag actactatta atttgccgtt ccagctggcg tgaactccaa ttattcttac
    11221 aactttcagc caaataaaat tcccttttgt cagaatcgga gatttgaatt agacgacgat
    11281 attgtgtcca attcaattgc gaccgcagtg cggtcgcaat tggaaacgca cgataaaact
    11341 ggcgataacg ctctaattga cggctacaaa aaccacttcc aaattctggc tcaagctctt
    11401 ttgcgagcat tttaatcagg tatgttccat aatcagcacg ctcttgccct tgttgctcct
    11461 gttcaaaaat ccgttttccg atgtgccaat acatcagcac acgttggaaa tctaccgcac
    11521 gaaccgcatt ttcacgagct tgagcaataa tttgtttaat atcttagatc atcgttgttt
    11581 ctattaacat aaaagcctcc gttttggatt aagtttatgc ttaatctatc cggaggcaat
    11641 ttctttcact caacttttcg agtcatatca caattttatt ttgttaaatt taattttgca
    11701 caaacgcttg cgtttgaaca tcagctttgc tgatggctcg aagagcgaac gtagtgagta
    11761 aatttttgct ctaatttgag cgcttgttgg gcaagttctt cgacttggtc atagaaatgc
    11821 accgcctgta aacgatgcac caacaccggt ctttcttgga ttaaattctc aaccaaatgt
    11881 tgattatttt gctcaaattg agcttttact ttacctagca attttttagc aagatcggtg
    11941 ctagtttgag ccactacatc gccaacaaaa ggggaaagca gttcggcagg gtctttttcg
    12001 agctgttcaa gtaatgcagt gaaatgttgc aacacttgaa tatcgcccgt cagcaccaac
    12061 gatttattat taatcagctc ggttaatttt tgcttatccg ctagtttcgg cagggtgtca
    12121 aatgccagtt gcaccgtaca atctgcttcc ccctcgtagt tgccaagcca atcggttcgg
    12181 ctttcgctaa acaacacaaa aaagtcgatt ttaggcgaag ttagggcgat ttttagcact
    12241 tttccggaca atttacgcaa attcggctca atatgaggcg agcgtttaag taacgcatta
    12301 aaagcggttt caatcagacc aaaggtaaat tgcgggagca ttaattgttg ttttacatta
    12361 tttaacattc gtacctactt accctcttca cttttgggag aaggatagat tgttcttcat
    12421 taagaagcaa aatcagggag aggggtattt gcaaaatatt gaataaatat gaccgcttgc
    12481 cccctctctc tgcttatttc gctaaacgct cataagcggt ctctctccca caaagggaga
    12541 gagtcattta agagaaaact aaaatttata acctctgtgt aatgccacaa tgccggcact
    12601 taagttgtag taattcacgc tttcaaagcc agtttgttcc atcattgctt ttagctcgtc
    12661 ttgtttcggg tgcattcgga tcgattcagc taaatagcgg taactttcgg cgtcatttac
    12721 caccacttcg cccactttcg gcaaaatatt gaatgagtag aaattataaa gctggctgat
    12781 tgggtcgata atcggttttg agaattccaa cacaagtaag cgaccgcccg gttttagcac
    12841 gcggaacatt gaacgtaggg ctttgtcttt gtcggtaaca ttacgcaagc caaaactaat
    12901 cacaatacaa tcaaaagtgt tatcagcaaa aggcaagcat tcggcattcg cttgaacgta
    12961 gctcacattt ccaaccacgc ctaaattgcg taatttttcc cgcccgactt ccaacattga
    13021 gctgttaata tcggctaaaa tcacctcacc actttcacca acaatgcgag agaattttgc
    13081 ggtaaaatca cccgtgccgc cggcaagatc cagcactttt tgccctttac gcacgccact
    13141 gcaatcaatg gtaaagcgtt tccacactcg atgaatgccg aaagaaagca aatcgttcat
    13201 taggtcatat ttgcctgcca ccgagtgaaa cacatttgcg accagttgct gtttttcttc
    13261 tttcgctacg gttttaaacc caaagtgggt ggtttctgcc gattgttgca cttcttgttg
    13321 cacttcatct ttaggtgcta attgttctac atcgctcatt ttcttgtctc tagttgcaaa
    13381 atttaggcgt aaccatagca aaaaagcggt cgtttttctt taactttttg caaattttct
    13441 taagtaaata accgctttct tgactagaaa agccaaattc tgtaacattc gcacactatt
    13501 ttttcttgag gattacacat tttggacagt catagtcgat acttacccgt ttaacctatc
    13561 ttgtctaacc tcaatgttac cgacaaggtc ggtaatgctc gcctagtatc tttgttcctt
    13621 tttgttccaa gcctcctaac tatttggagc taaacatgat ccgtgctttt ggactagata
    13681 acgcatgttt aatcagcgtt gatgaaacta acccaacttt attaaatgat gcgatttgga
    13741 ttgatctcat cgatccatca gaagctgaac gaaccgtatt agaaaaccgc ttagaccaaa
    13801 cactcgctga agaacgtgaa ttggaagact tagaggcgtc tgcccgtttc tttgaagatg
    13861 aagacggttt gcacctgcac tcgttctttt actgcttaga tgatgacgat tacgccgata
    13921 ttgccactgt cgccttcact attcgtgacg ggcgtttgtt taccttgcgt gatcgggatt
    13981 tacccgcatt tcgcttgtat cgaatgcgtt cccgccgtga gaaattgatt gacagcaacg
    14041 cctatgaact cttactcgat ttatttgaga ccaaaatcga gcagcttgca gacgtaattg
    14101 aagaagtcta tgctgactta gaaaaattaa gtcgggttat tctaaacggt cagcaagaaa
    14161 atgagaattt caatgatgcc ctttctcgct taactgaatt tgaagatgca agttcaaaag
    14221 tgcgtttatg tttgatggat acgcaacggg cgttaagttt cttactgcgt aaaacccgtt
    14281 tgccgaataa tcagctagaa caagcccgtg acattatgcg agatattgaa tctctgcaac
    14341 cgcacaatga atccttgttc caaaaagtga attttttaat gcaagcggca atgggttata
    14401 tcaatattga gcagaaccga attatgaaat tcttctcggt ggtgtcagtg atgttcctac
    14461 ctgctacgct ggttgcttct acttacggta tgaactttga atttatgccg gaacttcatt
    14521 tccaatatgg ctaccctatg gcgattggtt taatgattgt tgccgcctcc gccccttatc
    14581 tttattttaa acgtaaaggt tggttataat ttatttttaa agcctatagt tgaataactt
    14641 aggctttctt attttaatga atatgttcac ctctaaaaac aaa
//
LOCUS       DANLZQ010000069        14519 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.069, whole genome shotgun sequence.
ACCESSION   DANLZQ010000069 DANLZQ010000000
VERSION     DANLZQ010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 14519)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14519)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14519
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.069"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            166..597
                     /locus_tag="PXE50_001737"
     CDS             166..597
                     /locus_tag="PXE50_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3577 domain-containing protein"
                     /protein_id="HDL5622638.1"
                     /translation="MTTQTSTQKNYFNLHTTGIGYLNDIRLVEPKKGNPFYACRIAAL
                     VGESDSPEYRYFDMNVVGKETETLIKRCQKAVSEEKKVLVSFVMADLWFDTFTYSTDS
                     KFHKKGDTGVSVKGRLIRIKMIKIDGEIAYQEKPKSDEQSE"
     gene            615..1607
                     /locus_tag="PXE50_001738"
     CDS             615..1607
                     /locus_tag="PXE50_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005588345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5622639.1"
                     /translation="MLCWALLLDVQDLRVTFKTPDGDVTAVNDLTFSLNAGETLGIVG
                     ESGSGKSQTAFALMGLLADNGRISGSAKFNGQEILNLPETQLNRLRAEQIAMIFQDPM
                     TSLNPYMKIGEQLMEVLMLHKGMDHKTAFEESVRMLDAVKMPESRKRMNMYPHEFSGG
                     MRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKSEFNTAIIMITHDLG
                     VVAGICDNVLVMYVGRTMEYGTAEQIFYTPSHPYSIGLIGAVPRVDGQEEELITIPGN
                     PPNLLRLPSGCPFQPRCVHATKQCLKAPALTLLNDQRLRACFVPAEQLIRGNAS"
     gene            1604..2593
                     /gene="oppF"
                     /locus_tag="PXE50_001739"
     CDS             1604..2593
                     /gene="oppF"
                     /locus_tag="PXE50_001739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000994906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide/oligopeptide ABC transporter
                     ATP binding protein OppF"
                     /protein_id="HDL5622640.1"
                     /translation="MNTEKKVILEVKDLSVHFNIKDTKSLFFAKHQTLKAVNHVSFQL
                     YEGETLGVVGESGCGKSTLARAIIGLVESSGGNILWLGKELTQQSAKEWKTIRSDIQM
                     IFQDPLASLNPRMTIGSIIAEPLKIYQPHLTAEEVKEKVRAMMMKVGLLPNLINRYPH
                     EFSGGQCQRIGIARALIVEPKLIICDEPVSALDVSIQAQVVNLLKSLQREMGLSLIFI
                     AHDLAVVKHISDRVLVMYLGNAVELGDYEQVYHDTKHPYTKALMSAVPIPDPQLERNK
                     QIQLLEGDLPSPINPPSGCVFRTRCPLADQHCIADKPLLKGRDNHVVACFKAE"
     gene            complement(2697..3455)
                     /locus_tag="PXE50_001740"
                     /pseudo
     CDS             complement(2697..3455)
                     /locus_tag="PXE50_001740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014326384.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
     gene            complement(3585..4226)
                     /gene="bioD"
                     /locus_tag="PXE50_001741"
     CDS             complement(3585..4226)
                     /gene="bioD"
                     /locus_tag="PXE50_001741"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005724996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HDL5622641.1"
                     /translation="MAKVFFITGIDTDIGKTIATGWYAKKLMQQGASVITQKMIQTGC
                     RGIAEDLLIHRKIQGIELTEEDKQGITCPYVFDYPCSPHLAAKLEPRTIERKKIETCT
                     ALLCEKYDYVLLEGAGGLCVPYNEEETTLDYLCQHQYPVILVTSGKLGSINHTLLSLQ
                     VLNSKRVSVHAVIYNLYPETDQVISQETQHFLRRYLEKYSPNTLFEIMDLISV"
     gene            complement(4244..4999)
                     /gene="bioC"
                     /locus_tag="PXE50_001742"
     CDS             complement(4244..4999)
                     /gene="bioC"
                     /locus_tag="PXE50_001742"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005755527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HDL5622642.1"
                     /translation="MDRIDKGRIKQRFSAAVSNYDQQARAQQQIHQRLLSLLSYIDRQ
                     AFQRALEIGCGTGGLTKQLMSQLQVEHWELNDLCDMREHLQSVLPQPFHFHCGDAEQL
                     PFPQQYDLIASASVVQWFEDKAGFIARCKVRLKKHGFLLFSTFTPENLTQIKHLTGVG
                     LTYPRLEDWQKWLVPEFEILALEHEEIVLHFDDPLAVLKHLKQTGVTATQQQRWTKGQ
                     LHAFCQQYQQHYRNAQHKVELTYTPMYVLARLT"
     gene            complement(5003..5650)
                     /locus_tag="PXE50_001743"
     CDS             complement(5003..5650)
                     /locus_tag="PXE50_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005758126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF452 family protein"
                     /protein_id="HDL5622643.1"
                     /translation="MKTQHISQQGDNLIVYFAGWGTPPSVVEHLILPENYDLCLCYDY
                     RDLHCDVDFSAYQHIRVVAWSMGVWVAERVMQGYPLLSATAINGTGLPCDDQYGIPEA
                     IFAGTLSGLNEDNRTKFERRICGSKTLLRDYQHYSMRPTLQEIHAELTALYTFLQQDH
                     RTDLISWSKAIVGSKDKIFPAQNQRAYWQDRCAITEIAGEHLLFPHFTHWETCWL"
     gene            complement(5647..6810)
                     /gene="bioF"
                     /locus_tag="PXE50_001744"
     CDS             complement(5647..6810)
                     /gene="bioF"
                     /locus_tag="PXE50_001744"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005719374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HDL5622644.1"
                     /translation="MIRYYQQQLADLKAQNQFRQLPQLIHRGRFIQREDNTMLNMSSN
                     DYLGLANNEALRQAFFTQYQDQLPALTSSSSRLLTGSFPIYDELESLMAQAFGRETAL
                     LFNSGYHANIGILPALADKKTLIVADKLVHASMIDGIRLAQCEFVRFRHHDYVHLEQI
                     LQKNDRTFERIIVVTESVFSMDGDCADLTQLVALKQRYPQVMLYVDEAHAIGVLGEKG
                     LGLAEQQGCINQIDILVGTFGKALGSMGAYVICDQVIRDYLVNKMRPLIFSTALPPFN
                     VAWTHFVFQQLPHLQAERAHLAQLSQHLRQAIVDIFQVPMPSESCIVPYILGDNELTV
                     RTAQRLQQQGYYCLPIRPPTVPKGTSRIRFSLTADMQVAEVEQFIACLRELAE"
     gene            complement(6807..8108)
                     /locus_tag="PXE50_001745"
     CDS             complement(6807..8108)
                     /locus_tag="PXE50_001745"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016533607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HDL5622645.1"
                     /translation="MNEQQLLECDRQHIWHPYAALNADFPLFAVERAEGVYIQLKNGQ
                     QLIDGMSSWWSAIHGYNHPRLNHAATQQLSQMSHVMFGGLTHQPAVELAQQLVNILPE
                     SLDKIFFADSGSVAVEVAMKMAVQYQHAKGETQRYKFATIRSGYHGDTWHAMSVCDPV
                     TGMHSLFAKGLPVQYFLPQPPVKFGQAWQPEAMQPLQDLLAQHGDEIAGLILEPVVQG
                     AGGMYFYSPEYLVQAKALCEPYGILLIFDEIATGFGRTGKLFACEHANVVPDVMCIGK
                     ALTGGYLTLSATITNQAVADVICSGEAKCFMHGPTFMANPLACAVAAESIKLLLASPW
                     QQRIQQIEQQLRQELRQAEALDCVAEMRVLGAIGVIEMKAPVNMASLPPRFVQNGVWV
                     RPFGKLVYLMPPYIISSDQLSQLIHGTIRTLQEEYAHKESL"
     gene            8250..9137
                     /gene="psd"
                     /locus_tag="PXE50_001746"
     CDS             8250..9137
                     /gene="psd"
                     /locus_tag="PXE50_001746"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005755522.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HDL5622646.1"
                     /translation="MNILEKKAQLSYWQRIKIAFQYVMPQLYLTRLAGWFAKQQWGAV
                     THFVIKLFAKKYHVDMSEAAKPNFSDYASFNEFFIRPLADNARPINQNPTALCLPADG
                     RISQLGHIEQDLLLQAKGHYFSLNDLLAGDEALAHHFKDGEFATTYLSPRDYHRVHMP
                     CDATLCKMIYVPGDLFSVNPFLAEHVPNLFARNERVICVFDTEFGKMVQILVGATITA
                     SMSTVWAGVINPPRPEKITTWTYEGESAVKLLKGQEMGAFQLGSTVINLFEKDRVQLA
                     SHLQVDSPVRMGEILAHQK"
     gene            9162..9716
                     /locus_tag="PXE50_001747"
     CDS             9162..9716
                     /locus_tag="PXE50_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HDL5622647.1"
                     /translation="MSQQFFDQVSLESQLEVSAEAVAKGIFDVLNQNPPALELNEVSH
                     ALQTLQQQAKFKEIEAVGAQFLAENAQKAGVNTTESGLQYEVLVAGEGQIPAREDKVR
                     VHYTGTLIDGTVFDSSVKRGQPAEFPVNGVIAGWIEALSMMPVGSKWRLTIPHNLAYG
                     ERGAGASIPPFSTLVFEVELLAIL"
     gene            complement(9776..10099)
                     /locus_tag="PXE50_001748"
     CDS             complement(9776..10099)
                     /locus_tag="PXE50_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005755520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622648.1"
                     /translation="MNWKAVLIFSVLGSLVSCASYSEHAVQRIEAGKSFAVTGNTKRI
                     NTMACQDNDDWYLDGYRVGKSFREHQQKMLIQRTAYCEEQTGKAVPDKFRHSWNSGYQ
                     QGLKR"
     gene            complement(10123..11226)
                     /gene="proB"
                     /locus_tag="PXE50_001749"
     CDS             complement(10123..11226)
                     /gene="proB"
                     /locus_tag="PXE50_001749"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005719361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HDL5622649.1"
                     /translation="MKIDKTLVVKFGTSTLTQGSAKLNLPHMIDIVRQLAQLHQAGFR
                     LVIVTSGAIAAGRHYLNHPQLPPTIASKQLLAAVGQSQLIQTWEKLFAIYDIHIGQIL
                     LTRADIEDRERFLNARDTLRALLDNQIIPVINENDAVATSEIKVGDNDNLSALVAILV
                     QAEQLYLLTDQQGLFDRDPRKHPDAKLIADVDKITDHIRAIAGGSGTSLGTGGMSTKI
                     SAADVATRSGIETIIAPGNRPNVIVDLAYGQAIGTKFSVQADRLESRKQWLYAAPSAG
                     IITIDAGAENAMLIQHKSLLPAGIVNVEGRFSRGEVVKIRTQQGKDVALGMPRYNSDA
                     LHLIQGKHSQDIEQVLGYEYGAVAVHRDDMIVL"
     gene            11392..12380
                     /locus_tag="PXE50_001750"
                     /pseudo
     CDS             11392..12380
                     /locus_tag="PXE50_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252470.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
     gene            12455..13102
                     /locus_tag="PXE50_001751"
     CDS             12455..13102
                     /locus_tag="PXE50_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3560 domain-containing protein"
                     /protein_id="HDL5622650.1"
                     /translation="MTINTYAKFAPTVFVAKCSESHTKGEIITLTSKYGNETEVQVHN
                     LVKQDGEHYFYSFTRCDGMDSQSFAQQKAERYQGYADNAAKRSQDWVNAANEGCDFLS
                     LGEPIKIGHHSEKRHRNLIERNARRMDNAVAEMNKAASYESRIAYWEKMAGKIDLSMP
                     ESLEYFKFELDKAKTKHKELKDNPEKREHGYSLTYAKKAVNELEKKVKLAELLWA"
     gene            13126..13533
                     /locus_tag="PXE50_001752"
     CDS             13126..13533
                     /locus_tag="PXE50_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme utilization protein"
                     /protein_id="HDL5622651.1"
                     /translation="MNRQGIYINGKQVFDSQGEDIQSIGFFGCNIQTVVGINKGSILV
                     SSNSNQLLVNGQSIELGSEPVLKIEVLGNVQKLSAGAADVSITGDAGSVDTVSGDVSI
                     KGNVASYVKTVSGDVRCRAITGSVETVSGDIYR"
     gene            13631..13981
                     /locus_tag="PXE50_001753"
     CDS             13631..13981
                     /locus_tag="PXE50_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622652.1"
                     /translation="MTTINLSQQERELVEFVWNNRNTPWFFHCSVSNVSRNNTSRQIA
                     VCVIKDNQLISLDELIAKLCGYKLRQNGLYVTVHNMDAVFDTLYRFMCKLNDEMEANE
                     NVCPYLSLAHYEVF"
     gene            14072..14434
                     /locus_tag="PXE50_001754"
     CDS             14072..14434
                     /locus_tag="PXE50_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622653.1"
                     /translation="MIDTFFDLDDTSCYLGNWEDILKEYDDCLSVEDFWHSAKEFDTV
                     PHFGNLYQERVILKLIARFCIELNIEQDSGLVEFDYYINAIDTHFYINSQRICDIDDW
                     NEMLDKIREEMTPAKLVA"
BASE COUNT         4195 a         3152 c         3006 g         4166 t
ORIGIN      
        1 agcattctga aagggaacgc cacttttgtg ggaatgccac ctaaaccctc taccatctca
       61 gtgaagcatc attgagattt cattttactt ccacctcgcg gggaacattt ttcccgtgtt
      121 gggcaaggat gtttctccgc ttttttacat ttggagaaac aaactatgac aactcaaact
      181 tctactcaaa aaaattactt caaccttcat acaacaggca ttggctatct aaacgatatt
      241 cgtttggtag agcctaaaaa aggaaatcct ttttatgcct gccgtatagc agctctggtt
      301 ggcgaatctg actctcctga gtacagatat tttgatatga atgtagtcgg taaagagact
      361 gaaacactta tcaaaagatg ccaaaaagca gttagtgaag agaaaaaagt gcttgtgtca
      421 tttgtaatgg ctgatttgtg gttcgataca tttacttact caacagatag taaattccac
      481 aaaaaaggcg ataccggtgt atctgtaaaa ggtcgcttaa tccgcatcaa aatgattaaa
      541 attgatgggg aaatagccta ccaagaaaag ccaaaatcag atgagcaatc tgagtaattt
      601 tacctaagcc cgacatttta tgttgggctt tattactcga tgtacaagat ttgcgcgtaa
      661 cttttaagac cccagatggc gatgttactg ccgtcaatga tctgactttt tctttaaatg
      721 ccggtgaaac cctcggcatt gtcggcgaat ctggctcagg aaaatcgcaa accgcttttg
      781 ctctaatggg gctattagca gataacgggc gaatttcagg atcagcaaaa tttaatggac
      841 aagaaattct caacttgcct gaaacacaac ttaaccgctt gcgtgctgaa caaattgcga
      901 tgatcttcca agatccaatg acctcgctga acccttatat gaaaatcggc gaacagctaa
      961 tggaagtact gatgttgcat aaaggcatgg atcataaaac tgcgtttgaa gaatcggtac
     1021 ggatgttaga tgcggtgaaa atgccggagt cacgtaaacg tatgaatatg tatccgcatg
     1081 aattttccgg cggtatgcgt cagcgtgtga tgattgcgat ggcattactt tgccgtccga
     1141 aactcctcat tgcggatgaa cccacaactg cgctcgatgt gacggtgcaa gctcaaatca
     1201 tgaccttatt aaacgaatta aaaagcgagt ttaataccgc cattatcatg attactcacg
     1261 atctcggtgt ggtcgcagga atttgcgata atgtgttggt gatgtatgta ggcagaacca
     1321 tggaatacgg caccgctgag caaattttct ataccccaag ccacccttat tctatcggct
     1381 taattggtgc agtgcctcgc gttgacggac aggaagaaga actcattact attccgggta
     1441 atccacctaa cttattacgc ttaccgagtg gctgtccttt ccaaccacgt tgcgttcatg
     1501 caactaaaca gtgcctcaaa gcaccggcgt taaccttgtt aaatgatcaa cgtttacgcg
     1561 cttgttttgt ccctgccgag caattaatcc gaggtaacgc atcatgaaca cagagaaaaa
     1621 agtgatccta gaagtgaagg atttaagcgt tcatttcaac atcaaagata cgaaatcttt
     1681 attctttgct aaacaccaaa ctttaaaggc cgtcaatcat gtctcttttc agttatacga
     1741 aggcgaaacc ttaggtgtgg tcggtgaatc gggctgtgga aaatcaactc tcgcacgcgc
     1801 gattattggc ttagtggaaa gctctggcgg taatatttta tggctaggta aggagttaac
     1861 tcaacaaagt gcgaaagaat ggaaaacgat ccgtagcgat attcaaatga ttttccaaga
     1921 tcctttagcc tccctgaatc cacggatgac cattggcagt atcattgccg aaccattaaa
     1981 aatttaccaa ccccatttaa ccgcggaaga agtgaaagaa aaagtacgcg cgatgatgat
     2041 gaaagtgggc ttattaccta acttaatcaa tcgctatcca catgaatttt cgggtggaca
     2101 atgtcagcgt atcgggattg cgcgcgcctt gattgtggaa ccaaaactca ttatttgcga
     2161 tgagccagtg tccgccttag atgtttcaat ccaagcacaa gtagtgaatt tattgaaatc
     2221 tttacaacgc gaaatggggc tatcattgat tttcattgca cacgaccttg ctgtggtgaa
     2281 acacatttcc gatcgtgttt tggtcatgta tcttggtaac gcggtggaat taggtgacta
     2341 tgaacaagtc tatcacgata ctaagcatcc ttataccaaa gctttgatgt ctgcggtacc
     2401 gattcctgat ccgcaattag aacgcaataa acaaattcaa ttgcttgaag gcgatctccc
     2461 ttccccgatt aatccgccgt cgggctgtgt gttccgcacc cgttgcccac tggcagatca
     2521 acactgtatt gcagacaaac cgctcctcaa aggacgagat aatcacgttg ttgcttgttt
     2581 taaagccgag taatacacac aaccgcacaa aaaagtgcgg ttgttttttt gcgaatattc
     2641 acagtcagac tttcgtgata ctttcgctct gagataagga ttacgataca gagaagttat
     2701 tcaacaatca cacgtgcatt gatcggttgc actggacgat tattgtgtcc tttcatcaag
     2761 gtcgcaaacg cctcaacttg agattggcta atgttgtcat agtgttttaa cactaaccaa
     2821 tttacacctt cagaacaagg tggtgtagtt aatgacccgc tgaaacgata gtaatcgcgt
     2881 tttttcggaa ttaatgttgc tgggtcaaaa gcggtactaa gcgtatattt ctcccctgct
     2941 ttttgcggga agttttgcca aattggggct aaccattggt tttcacttga taatacatag
     3001 agcacgccaa gcacagcaag attcccttca ttgtctgcgt gtacaaaatg tgcttccatc
     3061 gggaaggatt tacctcaaat taagttttca ctcggcacat ggaaatggaa ttgtttaagg
     3121 gtaaaagtct ttccattaag ctgcatgcga ttacttgcct ctttgaaatc cacttgaata
     3181 gtatgcccat tattgacaat ctccacattg gaaggtcgat aatccagctt aatcggcgct
     3241 aacttaccat caatcgtatg cttgatatct attggtgttt ggtttttacc ttcgccacaa
     3301 atacggaatt tgggtgaaag ttcagcccaa tgttctggcg attcgtgtcc ggtgtatccc
     3361 caatgcgtgt gcgtttcttc tttcttaagg gggcttgtac acgctgtcaa tgctaatgca
     3421 cctaacgtaa gcacaaaaag gtttgatttt ttcatagcct agctcctgat taaaagagat
     3481 gaattgatga gacaacctaa actcaatgat gccttaatcc gagacgcttt catcttaggc
     3541 aaaacaacac tccatttcaa gtataacttg ctcaagaata tatcttagac cgaaatcaaa
     3601 tccattattt caaataaggt attaggcgag tatttctcta aataacgacg taaaaaatgt
     3661 tgtgtttctt ggctaatgac ttgatctgtt tccggataca agttgtatat cacagcatgc
     3721 acacttactc ttttggagtt gagtacttgt aaactcaata aggtatgatt aatactacct
     3781 agcttgccag aggtaactaa aatcacgggg tattgatgct gacaaagata atcaagggtg
     3841 gtttcttcct cattataagg tacacacaag ccgcccgccc cttccaataa tacataatca
     3901 tatttttcac acaaaagtgc ggtgcaggtt tcaatttttt tacgttcgat cgtgcgcggt
     3961 tctaatttcg cggctaaatg cggtgagcaa ggataatcaa acacgtaagg acaagtgata
     4021 ccttgcttat cttcttctgt aagctcaata ccttgtattt ttcggtgtat gagtaaatct
     4081 tcggcaattc ctcggcagcc tgtttggatc atcttttgcg tgatgacact tgcgccttgt
     4141 tgcatcagtt tcttggcgta ccaacctgtg gcgatggttt tgccaatatc ggtgtcgatg
     4201 ccagtgataa aaaaaacctt tgccatactt tttccttcta agattaagtt aaacgcgcca
     4261 gcacatacat cggcgtgtaa gtgagttcta ctttgtgttg tgcgttacgg taatgttgtt
     4321 gatattgttg gcaaaaggcg tgcaattgcc cttttgtcca cctttgctgc tgtgtggcag
     4381 taacgcctgt ttgtttcaaa tgttttaaca ccgctaaggg atcatcaaag tgcaacacaa
     4441 tctcctcgtg ttcgagggct aaaatctcaa attcaggcac tagccacttt tgccagtcct
     4501 caagacgtgg ataagttaac cccacaccgg tgaggtgttt gatctgtgtt aaattctcgg
     4561 gcgtgaaagt actgaataac aaaaatccgt gcttttttaa gcgcacttta caacgcgcaa
     4621 taaaacccgc tttatcttca aaccattgca ccacggaagc actggcaatc aaatcatact
     4681 gctgcggaaa gggaagttgt tccgcatcgc cacaatggaa gtgaaaaggt tggggcaaca
     4741 ctgattgcag atgctctcgc atatcgcaaa ggtcattcag ctcccagtgt tcaacctgca
     4801 actgtgacat taattgcttc gttaatccac cagtaccaca tccaatctct aatgcacgtt
     4861 ggaatgcttg tctgtcgata tacgacaata aactaagcaa acgttggtga atctgctgtt
     4921 gtgctctcgc ttgctgatca tagttcgata cagcggcaga aaaacgctgt ttaatgcgtc
     4981 ctttatcaat acgatccatg tgctacaacc aacaagtttc ccaatgggtg aagtgaggaa
     5041 acaacaaatg ctcccctgcg atttctgtta ttgcacaacg atcctgccaa taagcccgct
     5101 gattttgtgc agggaaaatt ttatcttttg agccgacaat cgccttgctc cacgagatta
     5161 aatctgtacg gtgatcttgt tgtaaaaagg tataaagtgc ggtcagttca gcatgaattt
     5221 cctgtaatgt gggacgcatg gaatagtgct gataatctct taacagcgtt tttgaaccac
     5281 aaatacgacg ttcaaattta gtccgattat cttcatttaa accagataac gtgccagcaa
     5341 aaatggcttc gggaatacca tattggtcat cacaaggtaa gcccgtgcca ttgatcgccg
     5401 tagcagatag cagtggataa ccttgcatca cacgctccgc tacccacacg cccattgacc
     5461 atgccaccac gcgaatatgt tgataagcgg aaaaatcaac atcgcaatgc agatctcgat
     5521 aatcatagca aaggcataaa tcataatttt ccggcagaat caggtgctcg accacgctcg
     5581 gcggtgtgcc ccaccctgca aaatagacga tcagattgtc gccttgctgt gaaatatgtt
     5641 gtgttttcat tcagcaagct cccgtaaaca agcaataaat tgttccactt ccgccacttg
     5701 catatctgca gtcagtgaaa aacgaatacg agaggttcct tttgggactg tcggcgggcg
     5761 aatcggtaag caataatagc cttgttgttg caaacgttgc gccgttctta ctgtcagttc
     5821 gttatcgccc aaaatataag gtacgataca actttcactt ggcatcggga cttgaaaaat
     5881 gtcaacaatc gcttggcgta aatgttgact aagctgagca agatgtgcgc gttcggcttg
     5941 caaatgtggt aattgttgaa agacaaaatg cgtccatgcc acattaaacg gcggaagtgc
     6001 cgtggaaaaa atcaatgggc gcattttatt aaccaaataa tctcggatca cttgatcgca
     6061 aatcacataa gcccccatag agcccaacgc cttgccaaac gtaccgacta aaatatcaat
     6121 ttggttgata cagccttgtt gttctgctaa ccctagcccc ttctccccca atacgcctat
     6181 cgcatgggct tcatctacat ataacatcac ttgcggatag cgctgtttta atgcgaccaa
     6241 ctgggtgagg tctgcacagt caccatccat actaaacacg gattccgtga ccacgataat
     6301 ccgctcaaaa gtgcgatcat ttttttgcaa aatttgttca aggtggacgt aatcatgatg
     6361 acgaaaacgc acaaactcac attgtgccaa gcgaatgcca tcaatcatac tggcatgtac
     6421 cagtttatcc gccacaatca gcgttttttt gtccgctaaa gcaggcaaaa tcccaatatt
     6481 agcatgataa ccgctattaa atagcaaggc agtttctcgt ccaaatgcct gcgccattaa
     6541 gctttctagc tcatcataaa tcggaaaaga gcctgttaat aaacgggagg aagaagaagt
     6601 caatgcaggg agttgatctt ggtattgcgt gaaaaatgcc tgacgcaagg cttcgttatt
     6661 ggctaaacct aaataatcat tggaggacat attcagcatc gtattgtcct cacgttgaat
     6721 aaaacgccct cggtgaatta gttggggcag ttggcgaaat tgattctgcg cctttaaatc
     6781 agctaactgc tgctgataat acctgatcat agagattcct tatgtgcata ttcttcttga
     6841 agggtgcgaa ttgtgccatg aattaattga gacaattgat ccgatgagat gatatacggt
     6901 ggcatcaaat acactaattt gccaaatgga cgcacccaaa cgccattttg cacaaagcgt
     6961 ggtggtaaac ttgccatatt gacaggcgcc ttcatttcaa tcaccccaat cgctccaagt
     7021 actctcattt cagcgacaca atctaaggct tccgcttggc gcaattcttg acgtaattgc
     7081 tgttcaatct gttgaatacg ttgttgccaa gggcttgcca ataacaattt gatactttct
     7141 gctgctaccg cacacgccag tggatttgcc ataaacgtcg gaccgtgcat aaaacatttt
     7201 gcctcgccag aacaaatcac gtctgctacc gcttggttgg taatggtagc ggatagagtt
     7261 aaataccccc ccgttaaagc tttaccgata cacatcacat ccggcacgac attggcatgt
     7321 tcacaagcaa ataatttgcc tgtacgccca aatcctgtgg caatttcatc aaaaatcagc
     7381 aaaatgccgt acggttcgca taaggctttt gcttgcacca aatactcagg ggaataaaaa
     7441 tacataccac ccgccccttg cactaccggt tctaaaatta aacccgcaat ctcatcacca
     7501 tgttgtgcca ataaatcctg taacggttgc atcgcttcgg gttgccaagc ttgcccaaat
     7561 tttaccgggg gttgcggtaa aaaatattgc acgggtagcc ctttggcaaa caagctgtgc
     7621 atgccggtca cgggatcaca cacggacatc gcatgccaag tatcaccatg atagcccgaa
     7681 cgaatcgtag caaatttata gcgctgtgtt tcgcctttag catgttgata ttgcactgcc
     7741 attttcatcg ccacttccac ggcgaccgaa ccactatcgg caaagaaaat tttatccaaa
     7801 ctttccggca agatgttgac cagttgctgc gccagttcta ccgctggttg gtgcgttaat
     7861 ccaccaaaca tcacatgact catttgactc agttgttgcg tggcagcgtg gtttaaacgg
     7921 gggtgattat agccatgaat cgctgaccac cacgatgaca tgccatcaat caactgctga
     7981 ccgtttttta actggatata cacaccttcg gcacgttcta ctgcaaataa gggaaaatcc
     8041 gcatttaacg ccgcataagg gtgccaaata tgttgtcgat cacattctaa aagttgctgc
     8101 tcattcatcg tttcacctcg gttgtgaatc gccctttcaa ctggcgtaaa ttcacgcaaa
     8161 tacttacata aacggaataa cttgttataa tcgccaagca tttggctttt caagcccatt
     8221 attctaactt aaaaagatga tttattacta tgaatatatt agaaaaaaaa gcacaactga
     8281 gttactggca acggattaaa attgcctttc aatatgtgat gccacaactt tatttaacac
     8341 gtcttgcagg ctggtttgca aaacagcaat ggggtgctgt cacacatttt gtgattaaat
     8401 tattcgcgaa aaaataccat gtggatatga gtgaagctgc aaaaccaaat ttcagcgact
     8461 atgcgagctt taatgaattt tttatccgtc cattagcgga caatgcccgt ccaattaatc
     8521 aaaatcctac cgcactttgt ttaccggcag atggtcgtat tagtcagtta ggacacattg
     8581 agcaggattt attgctacaa gccaaaggac attatttcag cttgaacgat ttgttagctg
     8641 gcgacgaggc gctcgctcat cattttaaag atggcgaatt tgccaccacc tacctctcac
     8701 cacgcgatta ccaccgtgtg catatgcctt gtgatgccac cttatgcaaa atgatttatg
     8761 tgccaggtga cttattctca gtcaatccat ttttagccga acacgtgcca aacttatttg
     8821 cacgtaatga acgcgtgatc tgcgtattcg ataccgaatt tggtaaaatg gtccaaattt
     8881 tagtcggcgc aaccattacc gcgagtatga gcaccgtgtg ggcaggtgtg atcaacccgc
     8941 ctcgtccaga aaaaatcacc acctggacct atgaaggaga aagtgcggtc aaattactga
     9001 aaggacaaga aatgggagcc tttcaattgg gctcgacggt gatcaattta tttgaaaaag
     9061 atcgtgtgca actggcatct catttacaag tggatagccc ggtacgtatg ggtgaaattc
     9121 ttgcccacca aaaataattt ttaaccacaa taggaaaaac aatgagtcaa caatttttcg
     9181 accaagtgtc attagaaagc caacttgaag tgagcgccga agccgtcgcg aaagggatct
     9241 ttgatgtgtt aaatcaaaat ccaccagcac ttgagttaaa tgaagtgagt catgccctac
     9301 agactttgca acaacaagcg aaattcaaag aaattgaagc cgttggtgca caattcttag
     9361 ctgaaaacgc gcaaaaagcg ggggtaaata ctacggaatc tggtttacag tatgaagtgt
     9421 tagtggctgg tgaagggcaa attccggcac gcgaagacaa agtgcgtgtg cattacactg
     9481 ggacattaat cgacggtacc gtctttgaca gctcagtaaa acgtggtcaa cctgcagaat
     9541 tcccagtaaa tggcgtgatc gctggttgga ttgaagcctt gtccatgatg ccagtgggtt
     9601 caaaatggcg tttaaccatt cctcacaacc tcgcttatgg cgaacgtggt gctggtgcct
     9661 ccattccgcc attcagtacc ttagtgtttg aagtcgaatt attagccatt ctttaaagct
     9721 aaacgctaga cataaaaaag tgcggtcatt ttccgcactt ttttatgtct agcgtttatc
     9781 gtttcaagcc ttgctgatag ccgctgttcc acgaatggcg gaacttgtcc ggcacagcct
     9841 tgcccgtttg ttcttcacag taagccgttc gttgaatcaa cattttttgt tggtgttctc
     9901 gaaatgattt tcccacacga tagccgtcca aataccaatc atcattatct tgacatgcca
     9961 tggtattaat ccgttttgta ttccccgtca ctgcaaaaga tttgcctgcc tcaatacgtt
    10021 gcaccgcatg ttcagagtat gaagcacagc tcaccagcga acctagtaca ctgaatatca
    10081 atactgcttt ccaattcatc ttgttacctt tctttttctg atttataaca caatcatatc
    10141 gtctcggtgt accgcaaccg ccccatattc ataaccgaga acctgttcga tatcttgcga
    10201 atgtttgcct tgaattaaat ggagcgcatc gctgttataa cgtggcatcc ctaaggcaac
    10261 atccttgcct tgctgagtac gaatttttac cacttcaccg cgtgaaaagc gcccttccac
    10321 gtttacaatc ccagcaggca ataacgattt atgttgtatt aacatcgcgt tttccgcccc
    10381 cgcatcaatg gtaataatac cggctgacgg cgccgcatat agccattgtt tacgactttc
    10441 taagcgatct gcttgcacac taaatttggt gccaatggct tgcccataag ctaagtccac
    10501 aatcacattc gggcgattac ccggtgcaat aatggtttca atgccggagc gggttgccac
    10561 atccgcggca ctgattttgg tggacatgcc acctgtgcct aacgaggtgc cacttccgcc
    10621 cgcaatcgcg cgaatatgat cggtaatttt gtccacgtcg gcgatcaatt tggcgtctgg
    10681 atgtttgcgc ggatcacgat caaataaacc ttgctgatca gtaagcaaat acaactgttc
    10741 tgcttgcacc aaaattgcca ctaacgcgga taaattatcg ttatcgccta ctttaatttc
    10801 tgacgtagcg acagcgtcat tttcattaat cactggaata atctgattgt ctaataaggc
    10861 gcgcaaagta tctctggcat ttaaaaaacg ttcacgatct tcaatgtcgg cacgggtcaa
    10921 taaaatctgc ccaatatgaa tatcataaat ggcaaacaat ttttcccacg tttgaatgag
    10981 ctgactttgt cctaccgcag ccaataattg tttcgaggca atcgtcggtg gcaattgcgg
    11041 gtgatttaaa taatgacgac ctgccgcaat cgcccctgag gtaacaatca ctaaacgaaa
    11101 gcccgcttga tgaagctgtg cgagctgacg cacaatatct atcatatgag gtaaatttaa
    11161 cttcgccgat ccttgcgtaa gcgtactggt tccaaatttt acaacgagtg ttttgtcgat
    11221 tttcatcttc tctatcttct tatttttgtc gcacaaaatt gaagctaact taccattaat
    11281 catcagaaaa atcatctcgt ttacttgcta ttttctatga tttagcacaa attttttctc
    11341 actaaaaggc atataataaa gtttcttgat ttttcagcta ggaacccgat tatgacctca
    11401 acctcttcac aagaaacgga gcggcaacga gaaatcactc gcctttgtgt tcaagttgcc
    11461 caactcttat acaacatggt gcagaaagtg ccatcgttgt gcaaatggca catcgcttag
    11521 gcttagccct cggtgtagat agcgtagaat gtgccctcac gccaaatgcc attattctta
    11581 ctacattagc ccaagaccat tgcatcacga cagtccgtaa aaaccaagac aaaggaatta
    11641 atatgcaagt ggttaccgaa gtgcaacgta ttgtgattac agcagaacgt aaaatctatg
    11701 atatgcaaca agtgcatgcc aaactggctc gcattaaacc gcttaaatac aatcgctatt
    11761 ttgtgatgtt gatgattggc gtatcctgtg ccagttttgc tcatttatct ggtggggacg
    11821 cactagtttc attggttaca tttctcgccg caacactcgc catgtatgtt cgccaatcac
    11881 ttgccgcaag acactataac cccttaattg tatttgcggt gaccgccttt gtcgcctcac
    11941 taattgcggg tatcgcgttg aaatataaca tcggcaatca gccccaaatt gccttggcat
    12001 ccagcgtatt attgctcgtt cccggctttc cactgattaa tgcactcgcc gatattttaa
    12061 aagggcatat caatatgggg attgcccgtt gggcactcgc gacaatcctc acatttgggg
    12121 catgcttagg cattgtattt gcgctgagtt tattcttaga ggaaatctgt atgctaaata
    12181 aattcattca agatgaattt ctacggctag atcaacgtta tgcagcttgg tatcaaagtg
    12241 aagaaacgga tgaagttgcc agaatgggga ttcaagaaag tgagcggatt ttgaaaattc
    12301 tgtatgcact gaaatataac gaagacccta tgcaaaatgg tttaggctat attgcattta
    12361 tggcatcaaa aggccaataa tttacttatc tcaacaattt acccaccggg gaaactcctc
    12421 gatggcgttt cccctacttt ataggagaaa cgctatgact attaacactt atgcaaaatt
    12481 tgcacctacc gtttttgttg caaaatgctc tgaatcacat accaaaggtg aaattattac
    12541 gctaaccagc aaatatggta atgaaaccga ggttcaagta cataatcttg ttaaacaaga
    12601 tggcgagcat tatttttatt catttactcg ttgtgatggg atggatagtc agtcatttgc
    12661 tcaacaaaaa gcagaacgct atcaaggcta tgcagataat gcagccaaac gtagtcaaga
    12721 ttgggtaaat gccgctaatg aggggtgtga ttttttgagt ttaggtgagc caataaaaat
    12781 tggtcatcac agcgaaaaga gacaccgtaa ccttattgaa cgtaatgctc gccgtatgga
    12841 caatgcggtt gcagaaatga acaaagctgc aagttatgaa tctcgtatcg catattggga
    12901 aaaaatggca ggaaaaattg acctgtctat gccggaaagt ctggaatact ttaagtttga
    12961 attggataaa gccaaaacaa agcacaaaga attgaaggac aaccccgaga aacgagagca
    13021 tggttattca ctgacttatg ctaaaaaagc agttaatgaa cttgagaaaa aagtaaaatt
    13081 agctgaatta ctttgggcat aattatttac aaaggagatg acgatatgaa tcgacaaggt
    13141 atttatatta atggcaaaca ggtgtttgat tcacaaggcg aagatattca aagcattgga
    13201 ttttttggct gcaatattca aacggtcgta ggcataaaca aaggaagtat tttagtctcg
    13261 tccaatagta atcaattatt ggtgaatgga cagtcgattg aattaggttc tgagccagtc
    13321 ctcaaaattg aggttttggg caatgtgcag aaactgagtg ccggtgccgc agatgtctct
    13381 attacaggag atgccggcag tgttgacaca gttagcggtg atgtctctat taagggaaat
    13441 gttgcctctt atgtgaaaac cgtgagtggt gatgttcgct gtcgtgctat taccggttcg
    13501 gtggaaaccg tctccggtga tatttatcgc tgatatttac tcatcttatt atttaccacc
    13561 ctattgggaa gcaattttcc caaggtgggc agattgtttc ccatttttat tttgaatttg
    13621 gagaaacatg atgaccacta ttaacctttc acaacaagaa cgtgagttag ttgaatttgt
    13681 ctggaataac cgtaatacac cttggttttt tcactgtagt gtatcgaatg tgtcgagaaa
    13741 taatacctct cggcaaattg ctgtatgtgt cattaaggat aatcaattga ttagccttga
    13801 tgaattgata gcaaaattat gtggttataa actcagacaa aacggattat acgttactgt
    13861 tcataatatg gatgctgttt ttgatacctt atatcgcttt atgtgcaagc taaatgatga
    13921 gatggaggca aatgaaaatg tttgccctta tttatcatta gctcactatg aagtgttttg
    13981 attggtatca gaactatcca ccctgtcggg aaacaatttt tccgataggg cagattgttt
    14041 cccactttta ttttgaattt ggagaaacat aatgatagac accttttttg accttgacga
    14101 cacctcatgc tatttaggta actgggagga tatactgaaa gaatatgatg attgtctttc
    14161 agttgaagat ttttggcatt ccgctaaaga atttgatacc gtacctcatt ttggcaacct
    14221 ataccaggag cgtgtcatcc ttaagttgat tgctcgattc tgtattgagc tgaatattga
    14281 gcaagattca ggtttagtcg aatttgatta ttatatcaat gcaatagata cgcatttcta
    14341 tattaatagc caaagaatct gtgatataga tgattggaat gaaatgttag ataagattcg
    14401 tgaagaaatg acgccggcta aattagttgc ctaatttttg caaattttta ctaaaaatga
    14461 cgcttactgt cgtcttaatt cacccacttg gggaaatatc tccccaatgg gatgacatt
//
LOCUS       DANLZQ010000070        14207 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.070, whole genome shotgun sequence.
ACCESSION   DANLZQ010000070 DANLZQ010000000
VERSION     DANLZQ010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 14207)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14207)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14207
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.070"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            131..1108
                     /locus_tag="PXE50_001755"
     CDS             131..1108
                     /locus_tag="PXE50_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HDL5622654.1"
                     /translation="MSRNLFQKRLNIKPYEYPELLEFKDAIRHSYWLHTEFNFTGDIQ
                     DYRTTINDHERHVLTRAMLAISQVEVNVKRFWGELYCYFPKPEMDDVGGTFAESEVRH
                     KDAYSFLLEKLGLNEMFSQIHEIEPLMNRIRYMESFMKDKDAGKGEFVLSLVLFSLFV
                     EHISLFGQFIIMMSFNKHKNLFKGISNAVEATSKEEEIHGKFGIALYEILRDEHSELF
                     TPEFFEDLQTLANQAFEAERGILDWIFEEGDLSFITKATVENYIKNRYNNSLSILGLE
                     PPHDIDPELLKETEWFDIEILSTKETDFFNKRSTDYSKKMKQITADDLF"
     gene            1095..2762
                     /locus_tag="PXE50_001756"
     CDS             1095..2762
                     /locus_tag="PXE50_001756"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HDL5622655.1"
                     /translation="MTYFNTDRPDFHWLNEDSRLFLQRGYLLEGTTALDRIRFIAEHA
                     ERKLGIEGYADKFYHYMARGYFSLSSPIWSNFGLDRGLPISCFGSYIGDSIHEIMVTT
                     AEVGMMSKIGGGTSAYFGDIRPRGSLIKNNGKSDGSFNFSKLFDTVIDVISQGTSRKG
                     QFAGYIDIEHGDIDEWLDIHTEGNPIQLMYYGVCVGHDWLESMKAGDPYKRQLWAKLL
                     QRKTETGIPYLFFKDNANAGRPDVYKDKNMTIHASNLCTEIMLPSSNEESFVCCLSSM
                     NLLYFDEWKDTDAPETLTYFLDVVMSEFIEKSQSIPFLDRANRFARRHRALGLGVLGW
                     HSYLQANNIAFDSFQAMQKNNEIFKTLQAKTLKASQELAQRFGEPEILEGYGRRNTTL
                     MSIAPTKSSSFILGSVSPSVEPFKSNYYVKDLAKIKTVYKNPFLEKLLQEKGLDTEEI
                     WTSILQNDGSVQHLEQLSEHEKEVFKTFAEISQLSVIQQAAQRQKYIDQGQSINVMIH
                     PATPARDLNQLYLTAEELGLKSIYYQNSMSAAQVFNRNLLSCSSCEG"
     gene            2766..3185
                     /locus_tag="PXE50_001757"
     CDS             2766..3185
                     /locus_tag="PXE50_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622656.1"
                     /translation="MGNLSHTSPNTIVEVVGEFPEITSSGYTFDKGPIQLRIGKHTAP
                     NKGFGVKHIEAEHMQEILNLGFTSVNEFVKAIIVENAKIFCEFSDLKGNHRPIILKAS
                     IGIVVLERKFLESGTIYSVVTAYRRTNPHGIQIGTMK"
     gene            complement(3420..4181)
                     /gene="nudC"
                     /locus_tag="PXE50_001758"
     CDS             complement(3420..4181)
                     /gene="nudC"
                     /locus_tag="PXE50_001758"
                     /EC_number="3.6.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) diphosphatase"
                     /protein_id="HDL5622657.1"
                     /translation="MNKGYWIIVSDFDIALEAGEIPFGSAEELGLSGREKLTIGQYQG
                     SPAYLVKALESDNQREFAYLRSQINRPPELSHLLHRAVSLNHFFQTHQFCGKCGEKTI
                     LASDEIAIYCNACGNRAYPTISPSIIVAVRKGRQILLANHLRHKGTIYTTLAGFVEAG
                     EAVETAVHREVFEETGIKVKNVRYFGSQPWAFPNSLMLGFLADYESGEIQLQEEEICD
                     AKWFDCEESLPEIPQQGTIAFELIQATLKLCRESK"
     gene            complement(4174..4857)
                     /locus_tag="PXE50_001759"
     CDS             complement(4174..4857)
                     /locus_tag="PXE50_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HDL5622658.1"
                     /translation="MKQPTFKRMTNKRSNFAKNLQKNPQKRPLTFAETTLVLLNKPYD
                     VLTQFTDEQGRKTLKDFITMPNIYPVGRLDRDSEGLLLLTNNGEIQHRLAHPKFDKQK
                     TYWVQVEGVPQPEDLAKLAKGVELKDGLTKPAKVRAIATPDFAWNIAPQIRERKTIPT
                     SWIELIISEGKNRQVRRMTAHIGFPTLRLIRVGIGQFRLGNLGCGEFQVLSENEKRKL
                     FTQLGLKDE"
     gene            complement(4854..5702)
                     /locus_tag="PXE50_001760"
     CDS             complement(4854..5702)
                     /locus_tag="PXE50_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL5622659.1"
                     /translation="MEKRTLALLKVHGTAVLFGASGIFGALIQSSAETIVLGRVMIAF
                     AIISLYFLWKKQPLVKLNLQQMAQLAFSAALLAAHWVTFFVAVKVGGVAVATLGFASF
                     PAFVALFESLFFREKLRFREVVLLIAITVGLILVTPEFTFGNQATQGLLWGVLSALVY
                     GILAVANRRTMSKISGVQASWWQYIFATLFLLPLSITEFPSVSTQDWFWIFCIGFLCT
                     TLAYTLFISSLDTINARTASMIISLEPVYAIVIAWLCFNEVPTLKMIIGGLIILLSVA
                     WANLKK"
     gene            complement(5702..6187)
                     /locus_tag="PXE50_001761"
     CDS             complement(5702..6187)
                     /locus_tag="PXE50_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FxsA family protein"
                     /protein_id="HDL5622660.1"
                     /translation="MPILAILFGIFFYIYCEISLLVNIGSIIGVLPTILLLVVISFLG
                     LWIVKLRGVYTLFSIKQDLSQGKIPTEAVGNSVMFIVAGILLIIPGFLSDILAILCVL
                     PFSRKWIQAFVINSVKNKVFMHFTAQTSSFSVTSAQDSNTFDAEFERKPDEQDQHNRI
                     K"
     gene            complement(6189..7511)
                     /gene="pepQ"
                     /locus_tag="PXE50_001762"
     CDS             complement(6189..7511)
                     /gene="pepQ"
                     /locus_tag="PXE50_001762"
                     /EC_number="3.4.13.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro dipeptidase"
                     /protein_id="HDL5622661.1"
                     /translation="MKNLFSTHLARLQQTVQSLLENAFLDGLWIYAGKAKTLFLDDQT
                     APFKINPYFNYFFPYPQAENCWLFLDGKNKPKIYFYAPEDYWVSTLKVPTEAFFAAEF
                     EWVLLRAENEIATFIQNPTACAFIGEDVELAKKLGFSHINPQKVLNSLNFARSIKTEF
                     EIESIYQAQFSALKGHQVAKEAFFAGKSEFEINLEYLKATQQSDLNVPYGNIVAINQN
                     GAVLHYTALDFDTHAKRHSFLIDAGTTVNGYASDLTRTYAFDSGSEFAELVAKMEQLK
                     LQIIAELSIGVNYLHYHTRMQQMISQLLAEHQFIHLSAEQIFEQGISRTFFPHGLGHL
                     LGIQVHDVGGFQQNARGSHKAPPEVYPSLRCTRELQENMVLTIEPGFYFIEMLLKPWK
                     NSALSSAFNWQKIEAFKAFGGIRTEDNIVMRANGAENLTANAAATLGG"
     gene            7522..7764
                     /gene="tusA"
                     /locus_tag="PXE50_001763"
     CDS             7522..7764
                     /gene="tusA"
                     /locus_tag="PXE50_001763"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005710491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA"
                     /protein_id="HDL5622662.1"
                     /translation="MTQLTVNKELDTLGLRCPEPVMLTRKTIRNMEEGEILHIIADDP
                     ATTRDIPSFCEFMDHQLIQKEVDSTPYHYWIKKGLE"
     gene            complement(7831..8262)
                     /gene="rraB"
                     /locus_tag="PXE50_001764"
     CDS             complement(7831..8262)
                     /gene="rraB"
                     /locus_tag="PXE50_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HDL5622663.1"
                     /translation="MYNLDELRTETDETISSLLADGSDPEALYIIEHHVAHHDFDKLE
                     KLVVDAYKLGYEISEAEEVEDENGKVIFVCDIVSEIHLNADLITAQQKELLPLIEKAG
                     AEYEGWGTYFEDPNADEDEYGDDGEFFDDENDDFEDEPRRH"
     gene            complement(8277..8888)
                     /locus_tag="PXE50_001765"
     CDS             complement(8277..8888)
                     /locus_tag="PXE50_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HDL5622664.1"
                     /translation="MKLNYHKTHFLTSAPDIRHLPEDTGVEIAFAGRSNAGKSTALNA
                     LTNQKSLARTSKTPGRTQLINLFKVETNCKLVDLPGYGYAAVPEQMKIQWQKALGEYL
                     QKRECLGGVVILMDIRHPLKDLDQQMIEWAVSANLPVLLLLTKADKLSQSARSKQVKM
                     VREAILPFQGDIQVEAYSALNKIGIDKLSNKLDSWFAPKLITE"
     gene            complement(8890..9306)
                     /locus_tag="PXE50_001766"
     CDS             complement(8890..9306)
                     /locus_tag="PXE50_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HDL5622665.1"
                     /translation="MSWYKALFSFNGRLNRRGFWIGFGIHFLFLFMVAMWINLAELSL
                     LSVLPLIITGFSLSAIIIKRLHDRNRSAKALLMALVPIICYLAAPYSQGIMQILLGQV
                     MPAFIGMLLFLEWGVFAGNPEPNQYGEQGLSFKFRE"
     gene            complement(9310..10140)
                     /locus_tag="PXE50_001767"
     CDS             complement(9310..10140)
                     /locus_tag="PXE50_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HDL5622666.1"
                     /translation="MFEYFLSLSPIWQAFLAGLFTWGCTIFGSSFVYFFKSVNRKLLD
                     SMMGFAAGVMIAASFWSLLAPSLEYAEADYGSLAWLPAAIGFLAGGAFIRLIDYVVPH
                     LHLSKPIEQAEGNDQLKQGLSKSTLLFLAITIHNIPEGLAIGVAFGALATQVSGVDAS
                     IMGAIGLAIGIGLQNIPEGSSLVLPIRGEGHSRKKAFWYGSMSAVVEPIAAVIGAVFV
                     LSMTAILPYALAFAAGAMIFVVVEELIPESQSSGNTDIATLSLMLGFVVMMVLDVALG
                     "
     gene            complement(10477..10592)
                     /gene="rrf"
                     /locus_tag="PXE50_001768"
     rRNA            complement(10477..10592)
                     /gene="rrf"
                     /locus_tag="PXE50_001768"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(10754..13652)
                     /locus_tag="PXE50_001769"
     rRNA            complement(10754..13652)
                     /locus_tag="PXE50_001769"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            complement(13969..14044)
                     /locus_tag="PXE50_001770"
     tRNA            complement(13969..14044)
                     /locus_tag="PXE50_001770"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14009..14011),aa:Ala,seq:tgc)
     gene            complement(14101..14177)
                     /locus_tag="PXE50_001771"
     tRNA            complement(14101..14177)
                     /locus_tag="PXE50_001771"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14141..14143),aa:Ile,seq:gat)
BASE COUNT         4102 a         3328 c         2712 g         4065 t
ORIGIN      
        1 tttctttata aatcaataag ctaccaaaga ccaataaaaa agagtgtttg tcaagacttg
       61 tcttgaaact ttttttgcat acaatcatct accagttcca aacataaact ttaagataga
      121 gcctacgaat atgtctagaa acctcttcca aaaacgctta aatattaagc cgtatgagta
      181 tcctgagctt cttgaattta aagatgcaat tcgccattct tactggttac acaccgaatt
      241 taacttcacc ggcgatattc aagactatcg caccaccatt aacgatcacg aacgtcacgt
      301 gttaacccga gcaatgcttg cgatttcaca agtagaagtg aatgtaaaac gtttctgggg
      361 cgagctatac tgctatttcc caaaaccgga gatggacgat gtaggcggta cttttgctga
      421 aagtgaagtt cgccataaag atgcttactc gttcctattg gaaaaattag gcctaaatga
      481 aatgttcagt caaattcatg aaattgaacc attaatgaac cgcattcgtt atatggaaag
      541 ttttatgaaa gataaagatg ctggcaaagg cgaatttgtt ttatcgttag tgctgttctc
      601 tttatttgtt gagcatattt cattgtttgg acagtttatt atcatgatgt cgttcaacaa
      661 gcataaaaac ctgtttaaag ggatttccaa tgcggttgaa gccacctcaa aagaggaaga
      721 aattcacggt aaattcggaa ttgcgttata cgaaatttta cgtgacgaac acagtgaact
      781 attcacacca gaattttttg aagatttgca aaccttggca aatcaagcgt ttgaagcaga
      841 acgtggcatc ttagactgga ttttcgaaga aggtgattta agctttatca ccaaagcgac
      901 ggtagaaaat tacattaaaa accgttacaa caattcttta agcattttag ggttagagcc
      961 gccacacgac atcgaccctg aattattaaa agagactgag tggtttgata ttgaaattct
     1021 ttcaaccaaa gaaaccgatt tctttaacaa acgtagcacc gattattcta aaaaaatgaa
     1081 acagattacc gcagatgact tattttaata cagaccgccc ggacttccac tggcttaatg
     1141 aagacagccg tttattctta caacgtggct atttattgga aggaacaacc gcattagacc
     1201 gcattcgttt tattgccgaa cacgcagagc gaaaactcgg cattgaaggc tatgccgata
     1261 aattctatca ctatatggca agaggctact tctcgctttc ttcgccaatt tggtcaaact
     1321 ttggcttaga tcgtggctta ccgatttctt gtttcggtag ctacatcggc gactctatcc
     1381 atgaaattat ggtgactacc gctgaagtgg gcatgatgag taaaattggc ggtggtactt
     1441 cggcctactt tggcgatatt cgtccgcgtg gctcgttaat taaaaacaac ggtaaatcag
     1501 acggctcatt taacttcagt aaattatttg acactgtgat tgacgtgatt tcacaaggaa
     1561 catcacgcaa aggtcagttt gccggttata ttgatattga gcacggcgat attgacgaat
     1621 ggctggatat tcacaccgaa ggcaacccaa ttcaattaat gtattacggt gtgtgtgtcg
     1681 gtcacgattg gttagagtca atgaaagccg gcgatccata caaacgtcag ctttgggcaa
     1741 aattgttaca acgtaaaacc gaaaccggta tcccttattt attctttaaa gacaatgcca
     1801 acgcaggtcg tcctgatgta tataaagata aaaatatgac gattcacgcc tctaacttat
     1861 gtactgaaat tatgttgcct tccagcaacg aagaaagttt cgtatgctgt ttatcgtcta
     1921 tgaacctact ctactttgat gagtggaaag ataccgatgc accagaaaca ttaacctatt
     1981 tcctcgatgt tgtaatgagt gaatttattg agaaaagtca atcaattcca ttcttagacc
     2041 gtgcaaaccg ctttgcccgt cgccatcgtg cattaggttt aggcgtgttg ggctggcaca
     2101 gctatctaca ggcaaataat attgcctttg acagcttcca agcgatgcaa aaaaacaacg
     2161 agattttcaa aacgcttcaa gcaaaaacct tgaaagcctc gcaagaattg gctcaacgct
     2221 tcggcgagcc ggaaatttta gagggctatg gtcgccgtaa tactacatta atgagtattg
     2281 ctccgactaa atccagtagc tttattttag gcagtgtgtc gccatcggta gagccgttta
     2341 aatccaacta ctatgtaaaa gatttagcga agatcaaaac cgtgtataaa aacccgttct
     2401 tagagaaatt actccaagaa aaagggctag acaccgaaga aatttggacg tctattttac
     2461 aaaatgatgg ctcggttcag catttggaac agctttccga gcacgaaaaa gaagtattta
     2521 aaacctttgc cgaaatcagc caattaagcg tgattcagca agctgctcaa cgtcaaaaat
     2581 atattgacca agggcaaagt attaatgtga tgatccaccc agccacaccg gctcgtgatc
     2641 ttaaccaatt atacttaaca gcagaagagc tgggcttaaa atccatctac taccaaaact
     2701 caatgagtgc agcacaggta tttaaccgta acctattaag ctgctcaagt tgcgaagggt
     2761 aaataatggg aaatttatcg catacttcac ctaatactat tgttgaagtt gttggtgaat
     2821 ttcctgaaat aacatctagt gggtatacct ttgataaagg tcctattcaa ttaagaatcg
     2881 gcaaacatac tgctccaaat aaaggctttg gtgtaaagca tattgaagcc gagcatatgc
     2941 aagaaattct taatctagga tttacatcag ttaatgaatt tgtcaaagct atcatagtag
     3001 aaaacgctaa aattttttgc gaattctcag atttaaaagg caatcatcgc cctattattc
     3061 tgaaagcaag tattggcatt gtggttctag agcgtaagtt tttggaaagc ggtacgatat
     3121 attcagttgt aaccgcttat agaagaacaa atcctcacgg aatacaaata ggcactatga
     3181 aataaagtac gttagtgtta taatcagttc cacgcaagag catttgtaga aaataacagg
     3241 cggatttggt tttctactgt gggcggcagg tttccgctaa cctgtaatag ctatttaatt
     3301 tttatattaa atcctgaact tgaaacagac taagggattg ctgcggtagc taagaataca
     3361 aacctctcta taatcatata gagaggtttt ttcttattga tgagcacaag ttaagataat
     3421 tatttactct cccgacataa cttcaaggta gcttgaatca gctcaaaagc tattgtgcct
     3481 tgttgtggga tttcaggtaa gctttcctca cagtcgaacc attttgcatc gcagatttct
     3541 tcttcctgta gctgaatttc accgctttca taatccgcta aaaaacctag cattaatgaa
     3601 ttgggaaacg cccaaggttg gcttccaaaa taacgcacat ttttcacttt aatgcccgtt
     3661 tcttcaaaca cttcacgatg caccgcagtt tctaccgcct caccggcttc gacaaaaccg
     3721 gctaaagtgg tataaattgt gcctttatgg cgtagatgat tggctagtag gatttgtctg
     3781 ccttttcgca ccgccacaat aattgacggg ctaatcgttg ggtaagctcg attgccacac
     3841 gcattgcagt aaattgcaat ttcatcgctt gccagtatgg ttttctcgcc acattttccg
     3901 caaaattggt gagtctgaaa gaaatggtta agcgaaacag ctcgatgcaa caaatgagac
     3961 agttcgggtg gtcggttaat ttggcttctt aaataagcaa actctcgctg attatccgat
     4021 tctaacgcct tcaccaaata agccggcgag ccttgatatt gcccgatggt taatttctca
     4081 cgtccactta agcccagctc ttccgcactt ccgaatggaa tttccccagc ctccaaggca
     4141 atatcaaaat cgctgacgat aatccaatat cctttattca tctttcaatc ctaattgtgt
     4201 aaacaactta cgtttttcat tttcagatag cacttgaaac tcaccacagc ctaaattgcc
     4261 taatctaaac tggcctatcc caacacgaat taaccgtaaa gtcgggaaac cgatatgtgc
     4321 agtcattctt ctgacttggc gatttttccc ttcagaaata atcaattcta tccagctggt
     4381 cggaatggtt ttccgctcac gaatttgcgg ggcgatattc caagcaaaat cgggcgttgc
     4441 tattgctctg actttcgcgg gcttggtcaa accatctttt aactccaccc cttttgctaa
     4501 tttggcaaga tcttccggtt gtggaacacc ctccacttgt acccaatagg ttttctgctt
     4561 gtcaaatttc gggtgagcta aacggtgctg gatttcgcca ttattagtca aaagcaacaa
     4621 tccttcactg tctctatcta gccgcccgac cgggtaaata ttgggcatcg taataaaatc
     4681 ttttagcgtt tttcgcccct gttcatcggt aaattgggtt agtacatcat aaggcttatt
     4741 gagtaacaca agggtggttt ccgcaaaggt aagcggtcgt ttttgcggat ttttttgcaa
     4801 atttttagcg aaatttgacc gcttgtttgt cattctttta aaggttggtt gtttcatttt
     4861 ttcaggttcg cccacgcaac agaaagtaaa ataattaagc caccgataat cattttaagg
     4921 gttggcactt cattaaagca aagccacgcg atcacaatcg catacaccgg ctcgagggaa
     4981 ataatcattg aggcagtacg ggcgttgatg gtatcaaggc ttgaaataaa cagcgtatag
     5041 gcaagggttg tacataaaaa accgatacag aaaatccaaa accaatcttg ggtggaaacg
     5101 cttggaaatt cagtgatgga gagaggcaac agaaaaagtg tagcaaaaat atactgccac
     5161 cagcttgctt gcacaccgga aattttgctc atggtacggc gattcgctac cgccaaaata
     5221 ccatacacca aagcagataa cacgccccac aataaacctt gagtggcttg attaccaaaa
     5281 gtaaattcag gggtaactaa aattaaacca accgtgatgg caattaatag caccacttca
     5341 cgaaagcgta atttttcacg gaagaacagg ctttcaaata acgccacaaa tgccggaaag
     5401 ctggcaaagc ctaaggttgc taccgccaca ccacctactt taaccgccac aaaaaaagta
     5461 acccagtggg cagctaataa agctgcagaa aatgcaagtt gagccatttg ctgtaagttg
     5521 agctttacaa gcggttgttt tttccataaa aaatacaaag agatgatagc aaaagcaatc
     5581 atcactcgcc caagcacaat ggtttcagcc gagctttgaa ttaatgctcc gaagatcccc
     5641 gaggcaccaa ataaaaccgc tgtgccgtgt actttaagta gtgcaagtgt tcttttctcc
     5701 actatttgat cctattatgt tgatcttgct cgtccggctt gcgttcaaat tctgcatcaa
     5761 acgtgttgct atcttgcgca gatgtaacag aaaaagacga agtttgggcg gtaaaatgca
     5821 taaacacctt attctttacg ctattaatta cgaaggcttg aatccatttt cggctaaagg
     5881 gtaacacgca taaaatcgct aaaatatcac ttaaaaagcc gggaataatc agcaaaatgc
     5941 cggctacaat aaacatcacc gagttgccga ctgcttcagt cggtatcttg ccttggctta
     6001 aatcttgctt gatggaaaag agggtataaa cgccccttaa cttcacaatc cataacccta
     6061 aaaatgaaat cacgaccagt aacaaaatcg tgggtaacac gccaatgatc gagccaatat
     6121 tcaccagcag cgaaatttcg caatagatat aaaagaaaat accaaacaga atcgctaaaa
     6181 taggcatatt atcctcccaa cgttgcggca gcgtttgccg tcagattttc tgccccattg
     6241 gctcgcatga caatattgtc ttcggtacga atcccgccaa aggctttgaa agcctcaatt
     6301 ttctgccagt taaaggcaga agataaggca ctgtttttcc aaggcttaag tagcatctca
     6361 ataaaataaa aacccggctc aatggtaagc accatatttt cctgtagctc acgggtacaa
     6421 cgcaaacttg ggtaaacctc tggaggagct ttatggctgc ctcgggcatt ttgctgaaaa
     6481 ccgcccacat cgtgcacttg aatacccaat aaatgcccta gtccgtgtgg gaagaacgta
     6541 cggctaatcc cttgttcaaa aatttgctcg gctgaaagat gaataaattg atgttccgct
     6601 aataattgcg aaatcatctg ctgcattcgg gtgtgataat gcaggtagtt caccccaata
     6661 ctcagctcag caataatctg caacttcaac tgttccattt tcgccaccag ctcggcaaat
     6721 tcagaaccgc tgtcaaaggc ataggtgcgg gtgagatcgg aggcataacc atttaccgtt
     6781 gtgccggcat caattaaaaa actgtggcgt tttgcgtggg tgtcaaaatc taacgccgta
     6841 taatgtagca ccgcaccatt ttgattaatc gccacaatat tgccataagg aacattgaga
     6901 tcagattgct gcgtcgcttt caaatattca aggttgattt caaattcgct tttgccggca
     6961 aaaaatgcct cttttgctac ttgatgccct tttaaggctg aaaattgggc ttggtaaata
     7021 ctttcaattt caaactccgt tttgatggag cgggcaaaat tcaggctatt cagcactttc
     7081 tgcggattaa tatggctaaa gcctaacttt ttggctagct caacatcttc accgataaag
     7141 gcacaagcgg tcggattttg gataaaggtt gcaatttcat tctctgctct caacaaaacc
     7201 cactcaaatt ccgcagcgaa aaaggcctcc gttggcactt ttagagtgga aacccaataa
     7261 tcttcagggg cataaaaata gattttcggc ttatttttgc catctaaaaa taaccagcaa
     7321 ttttcagctt ggggatatgg gaaaaagtaa ttaaaataag ggttaatttt aaacggggcg
     7381 gtttgatcgt ctaaaaataa ggtttttgcc ttgccggcat aaatccataa accgtctaaa
     7441 aaggcatttt ccagcaagct ttgcactgtc tgttgcaaac gtgcgagatg cgtagagaat
     7501 agatttttca taaggaataa aatgactcaa ttaactgtaa ataaagaatt agataccttg
     7561 gggctacgtt gcccagagcc ggtgatgctc acccgtaaaa caatccgtaa tatggaagag
     7621 ggagaaattt tgcatatcat cgccgatgac ccggccacta cccgtgatat tccgagtttc
     7681 tgcgaattta tggatcacca attaattcaa aaagaggtgg actccacccc ataccattac
     7741 tggattaaaa aaggcttgga ataaaccaca agcggtcgat tttagccata aaattgcaaa
     7801 tttatgcaca aaatcgaccg cttgttttaa ttaatgacgg cgaggttcgt cctcaaaatc
     7861 gtcattttca tcatcgaaaa attcaccgtc atcgccgtac tcatcttcat cagcattcgg
     7921 atcttcaaag taggttcccc agccctcata ctccgcaccg gctttttcaa ttaatggcag
     7981 taactctttt tgttgtgcgg taatgagatc cgcattcaag tgaatttcgc tcacaatgtc
     8041 gcatacaaaa atcactttac cattttcgtc ttccacttct tccgcttcgg aaatttcata
     8101 gcccagctta taggcatcaa ctactaattt ttccaattta tcaaaatcgt ggtgggcaac
     8161 gtggtgttca ataatataaa gggcttcagg gtctgaacca tcggctaata atgatgaaat
     8221 ggtttcatcg gtttctgtgc gtaattcatc gagattgtac atattgaatt ccttacttat
     8281 tctgtgatta attttggtgc aaaccagcta tctaatttgt tcgacagctt atcaataccg
     8341 attttattca gtgcggaata agcctctact tggatatcac cttggaatgg taaaatcgct
     8401 tctcttacca tttttacctg cttagagcgt gccgattggc ttaacttatc cgctttggtc
     8461 aacagcagta acaccggcaa gttggctgac actgcccatt caatcatctg ttgatctaaa
     8521 tctttcaacg ggtggcgaat atccattaaa atcaccacac cgcctaaaca ttcacgcttt
     8581 tgtaaatact cgcctaatgc tttttgccac tggattttca tctgttcagg tactgctgca
     8641 tagccatagc caggtaaatc cactaattta caattcgttt caaccttaaa caagttaatc
     8701 aactgcgttc gccccggtgt tttggaagtt cgggctaaac ttttttggtt agttaaagcg
     8761 ttcaaagcag tcgatttacc ggcatttgaa cgcccggcaa aagcaatctc cacacctgta
     8821 tcttcaggta aatgacgaat atccggtgct gaagttaaaa aatgggtttt atgatagttt
     8881 aatttcattt tattctctaa atttaaaaga taagccttgc tcgccatatt gattcggttc
     8941 aggattaccg gcaaatacac cccattctaa aaagagcaac attccaataa atgccggcat
     9001 cacctgtcca agcaatatct gcataattcc ttgtgaataa ggagctgcaa gataacaaat
     9061 aatcggcact aatgccatta acagggcttt tgccgaacga tttcggtcgt gtaatcgttt
     9121 aataataata gcagacaggc taaatcctgt aattataagc ggtagcacac tcaataaaga
     9181 caattcagcc aaatttatcc acatagcaac cataaacagg aaaagaaagt ggattccaaa
     9241 tccaatccaa aaacctcgtc tatttagcct accgttaaaa ctaaaaagtg ctttatacca
     9301 actcattttc taccctaaag ctacatcaag taccatcatt actacaaagc ctaacatcag
     9361 gcttaaagtc gcaatatcag tatttcccga actttgcgat tccggaatca gttcttctac
     9421 gaccacaaaa atcatcgctc cggcagcaaa ggcaagagca taaggtaaaa tagccgtcat
     9481 cgacagcaca aaaaccgccc caatcaccgc cgcaataggc tcaaccactg ctgacataga
     9541 gccataccaa aatgctttct tccgactatg cccttcgcct cgaattggca atacaagtga
     9601 cgagccttcg ggaatgtttt gtaaccctat tccgattgcc aaaccgatag ctcccataat
     9661 ggaagcatct acgcctgaaa cttgggttgc caaagcaccg aaagccaccc ctatggctaa
     9721 tccttctgga atattatgaa tggtaatcgc aagaaaaagc aaagtagatt ttgataagcc
     9781 ttgtttaagt tgatcatttc cttcagcttg ctcaatcggc ttactcaagt gcaaatgcgg
     9841 cacaacatag tcaattaatc gaataaaagc tccaccggca agaaagccaa tcgctgcagg
     9901 cagccaagct aaagagccat aatccgcctc ggcatattct aaagaaggtg caagcaaaga
     9961 ccaaaacgag gctgcaatca ttacacctgc ggcaaagccc atcatactgt ctaataattt
    10021 tcgattaacc gatttaaaaa aatagacaaa tgacgaaccg aaaatcgtac aaccccaagt
    10081 aaataaaccc gctaaaaaag cttgccatat tggagaaagt gaaaggaaat attcaaacaa
    10141 gaaatagtac cagctaaaat aaatattggc tcattctatc aaagattcag ggttattaat
    10201 atagtgtagc caaaggctca acgaagattt cacttgtaaa acttagcaag aaaataaccg
    10261 cttgcatttc cctttcataa atacaatgaa aatcctaaca agcggtcatt ttccgtgagt
    10321 tttttacctt taccacaaca acaaaaaacc gcctgtatct ctacaggcgg ctctttcttg
    10381 gattacttgt actttgttta tttgtactta ttttgctttt gcttaagttt tcgcttttgt
    10441 aacttttagc tttcgcttaa gctcgcttaa attaaaaccc gacgatgctc tactctcaca
    10501 tggcgaatca ccacactacc atcgacgtta ctgcgtttta cttctgagtt cggtatgggg
    10561 tcaggtagga ccacagcact cttgtcgtcg ggaaaattct tttctatttt tgaatttctt
    10621 taagttaact tcctaatcta actcttagtt cactttaata gttagattaa cttccttaac
    10681 ttcgattgat ttcttctcta gtttcgttct tcttctcaat acaaaaacaa gcctaaaaac
    10741 atttgagcgt tgtatagtta agcctctcgg gcaattagta ctggttagct caatgtctca
    10801 caacacttac acacccagcc tatctacgtc gtagtctcca acaaccctta cacacttata
    10861 gtgtgggaga actcatctcg aggcaagttt cgtgcttaga tgctttcagc acttatctct
    10921 tccgcatgta gctacccagc aatgcctctg gcgagacaac tggaacacca gtgatgcgtc
    10981 cactccggtc ctctcgtact aggagcagcc cctctcaatt ctccaacgcc cacggcagat
    11041 agggaccgaa ctgtctcacg acgttctaaa cccagctcgc gtaccacttt aaatggcgaa
    11101 cagccatacc cttgggacct acttcagccc caggatgtga tgagccgaca tcgaggtgcc
    11161 aaacaccgcc gtcgatatga actcttgggc ggtatcagcc tgttatcccc ggagtacctt
    11221 ttatccgttg agcgatggcc cttccattca gaaccaccgg atcactatga cctgctttcg
    11281 cacctgctcg acttgtctgt ctcgcagtta agcttgctta taccattgca ctaacctcac
    11341 gatgtccgac cgtgattagc aaaccttcgt gctcctccgt tactctttgg gaggagaccg
    11401 ccccagtcaa actacccacc agacactgtc cgagaccgcg ttccgcaatc ttcgttagaa
    11461 catcaaacgt taaagggtgg tatttcaagg acgcctccac aatcactggc gtgactgctt
    11521 caaaggctcc cacctatcct acacatcaaa attcaatgtt cagtgtcaag ctatagtaaa
    11581 ggttcacggg gtctttccgt ctagccgcgg gtacaccgca tcttcacggc gatttcaatt
    11641 tcactgagtc tcgggtggag acagcctggc catcattatg ccattcgtgc aggtcggaac
    11701 ttacccgaca aggaatttcg ctaccttagg accgttatag ttacggccgc cgtttactgg
    11761 ggcttcgatc aggagcttct cttgcgataa caccatcaat taaccttcca gcaccgggca
    11821 ggcatcacac cctatacgtc cactttcgtg tttgcagagt gctgtgtttt taataaacag
    11881 ttgcagccag ctggtatctt cgaccggttc aaccttcatc cgcaagggac tacaatctac
    11941 gccggcgcac cttctcccga agttacggtg ctattttgcc tagttccttc acccgagttc
    12001 tctcaagcgc ctgagtattc tctacctgac cacctgtgtc ggtttatagt acggtttata
    12061 ataacctgaa gcttagtggc ttttcctgga agcgtggtat cgattacttc atctccgtag
    12121 agactcgtca tcacttctcg gtgttaagga agaccggatt tgcctaatct tcccacctac
    12181 cggcttaaac agacatccaa cagtctgcta acctaacctt ctccgtcccc acatcgcagt
    12241 tattacaagt acgggaatat taacccgttt cccatcgact acgcttttca gcctcgcctt
    12301 aggggccgac tcaccctgcc ccgattaacg ttggacagga acccttggtc ttccggcgaa
    12361 cgagtttttc actcgtttta tcgttactta tgtcagcatt cgcacttgtg atatctccag
    12421 cagacttctc aatccacctt catcgactta cacaacgctc ccctacccaa cagactttcg
    12481 tctgatgccg cagcttcggt gctatatttg agccccgtta catcttccgc gcaggccgac
    12541 tcgactagtg agctattacg ctttctttaa atggtggctg cttctaagcc aacatcctag
    12601 ctgtctaagc cttcccactt cgtttcccac ttaatataga ctttgggacc ttagctggcg
    12661 gtctgggttg tttccctctc cacgatggac gttagcaccc accgtgtgtc tcctgagtat
    12721 cactcttcgg tattcgcagt ttgcatcggg ttggtaatcc gggatggacc cctagccgaa
    12781 acagtgctct acccccgaag gtgtccgctc aaggctctac ctaaatagat ttcggggaga
    12841 accagctatc tcccggtttg attggccttt cacccccagc cacaagtcat ccgctaattt
    12901 ttcaacatta gtcggttcgg tcctccagtt agtgttaccc aaccttcaac ctgcccatgg
    12961 ctagatcacc gggtttcggg tctatacctt gcaactacac gcccagttaa gactcggttt
    13021 ccctacggct cccttattca gttaaccttg ctacaaaata taagtcgctg acccattata
    13081 caaaaggtac gcagtcacaa gattactctt gctcccactg cttgtacgca caaggtttca
    13141 ggttctattt cactcccctc gccggggttc ttttcacctt tccttcacag tactggttca
    13201 ctatcggtca atcaggagta tttagccttg gaggatggtc cccccatctt caaacaggat
    13261 atcacgtgtc ccgccctact tgttgttagc ctagtaccac aatggagttt taaggtacgg
    13321 gattatcacc ctctacgatt gtccttccca gaacattccc ctaactttac tgctatcact
    13381 aactggctct ttcgcgttcg ctcgccgcta ctaacgaaat ctcggttgat ttcttttcct
    13441 cggggtactt agatgtttca gttctcccgg tttgcctcac acagctatgt attcactggg
    13501 tgatagtagg ttcttcacct actgggtttc cccattcgga catcttggat taaacgcctc
    13561 ttatcgactc atccaagctt ttcgcagatt agcacgtcct tcttcgcctc tgattgccaa
    13621 ggcatccacc ttgtgcgctt agtcacttaa ctatacaacc tcaaatgttt tctaaaactt
    13681 ctcaaaaata aaagtaaaaa aacaatgaag tcagttttac aactaaacac ttgactgctt
    13741 ttgttcagtc aagatttttt ctactcagac tttcaattta ttcgttatca cttatgtata
    13801 attacttatg cgtaacgaac ttgaaatatc tctcagtttt tcagcttgtt tccatattgt
    13861 taaagaacaa agataatggc tttcgcctat catcatacct aaaattgcaa ataatccggt
    13921 atttttaacc gcttgtaatc ttaggtatga tgataaagtc acgatgattg gtggagataa
    13981 gcgggatcga accgctgacc tcctgcgtgc aaggcaggcg ctctcccagc tgagctatat
    14041 ccccatttca tcttccgttt tcttcactca tagtcgcttc gctttcgctt gccttctgag
    14101 tggtgggtct gagtggactt gaaccaccga cctcaccctt atcaggggtg cgctctaacc
    14161 acctgagcta cagacccaac ggatgacctt cggttttttg tcttctt
//
LOCUS       DANLZQ010000071        13848 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.071, whole genome shotgun sequence.
ACCESSION   DANLZQ010000071 DANLZQ010000000
VERSION     DANLZQ010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13848)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13848)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13848
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.071"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(119..835)
                     /gene="rph"
                     /locus_tag="PXE50_001772"
     CDS             complement(119..835)
                     /gene="rph"
                     /locus_tag="PXE50_001772"
                     /EC_number="2.7.7.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001261764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HDL5622667.1"
                     /translation="MRPNNRANNQVREIKITRNYTRYAEGSVLIEFGETKVLCNATVE
                     ESVPRFLKGQQQGWVTAEYGMLPRATHSRTQREAAKGKQGGRTMEIQRLIARSLRAVV
                     DLKALGERTVTVDCDVIQADGGTRTASITGACVALYDAMNKLVANGTLKTNPMKGLVA
                     AISVGIVAGEAVCDLEYLEDSNAETDMNVVMVEDGRLVEVQGTAEGEPFSHQELLTLL
                     DLAKQGISQLVEAQRKALAE"
     gene            1116..1979
                     /locus_tag="PXE50_001773"
     CDS             1116..1979
                     /locus_tag="PXE50_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011272075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YicC family protein"
                     /protein_id="HDL5622668.1"
                     /translation="MIYSMTAFAHLEMKKEWGNAVWEIRSVNQRFLETYFRLPEQFRN
                     LEMTLRERLRSALTRGKVECSLRIDLSKTQNSEIALNKEYAAQVVQSLKWLKETANEG
                     EINLVDVLRFPGVVDNESQDLDQIAQDLLAGFEQILADFIAMRAREGENVQALILQRL
                     EAISVEAAKVQAQMPEILQWQKDRLQQRFDELNLQLDPQRLEQEMVLLAQRVDVAEEL
                     DRLQLHVKETTNILKKGGAVGRKLDFMMQELNRESNTLASKSINADVTNSAVELKVLI
                     EQMREQIQNLE"
     gene            1988..2878
                     /locus_tag="PXE50_001774"
     CDS             1988..2878
                     /locus_tag="PXE50_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein YgfZ"
                     /protein_id="HDL5622669.1"
                     /translation="MAMNFKQVSQSYPNLCVPLSQYCLIEIAGVDAEKYLQGQLTCDV
                     AKISVGEHTLTSHCDPKGKMSALLRLYRAENEKFMAIIHRSLLPEALTQLKKYAVFSK
                     VTFTELDTPLYGMAGEAAFAKLSENMTALRLTTGQPRAIVWGEELETTADEQLWTLMD
                     IQDGIPVLLQQNQFELIPQATNLQALESAISFTKGCYIGQETVARAKYRGANKRALFT
                     LAGNFESEISLPEVASAIEMQLGENWRATGTVLTSATDENTLWVQVVLNKDVEPNTKF
                     RANGVALEMVELPYSLAENE"
     gene            complement(2910..3170)
                     /locus_tag="PXE50_001775"
     CDS             complement(2910..3170)
                     /locus_tag="PXE50_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001196283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HDL5622670.1"
                     /translation="MALLITHKCTNCDMCLPECPNEAISVGDDIYIIDPVLCTECVGH
                     YEKPTCQKVCPITNCIIKDPDNIETEEQLWERFVMIHHPDQI"
     gene            3400..3819
                     /gene="rbsD"
                     /locus_tag="PXE50_001776"
     CDS             3400..3819
                     /gene="rbsD"
                     /locus_tag="PXE50_001776"
                     /EC_number="5.4.99.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005753460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-ribose pyranase"
                     /protein_id="HDL5622671.1"
                     /translation="MKKTLNLNAQLSHSIATLGHTDSLTVCDAGLPIPNTIERIDLAL
                     TAGVPSFLQTFDVVVSELFVERVLLAEEIKHKNPQVLAALLERLTQLEQTQQNKIQID
                     YVNHEIFKEQTHYSKAVVRSGECSPYANIILYSGVPF"
     gene            3829..5325
                     /gene="rbsA"
                     /locus_tag="PXE50_001777"
     CDS             3829..5325
                     /gene="rbsA"
                     /locus_tag="PXE50_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter ATP-binding protein RbsA"
                     /protein_id="HDL5622672.1"
                     /translation="METLLKMSGIDKEFPGVKALSNACLSVYGGRVMALMGENGAGKS
                     TLMKVLTGIYSKDAGSISYLGKEVTFKGPKDSQEAGISIIHQELNLVGNLTIAENIFL
                     GRESKTAWGAIDWKKMYAEADKLLARLGVKHSSHQLCAELSIGEQQMVEIAKALSFES
                     QVIIMDEPTDALTDTETASLFKVIRELKAENRGIVYISHRLKEIFEICDDVTVLRDGQ
                     FIGERVIADIDEDQLIEMMVGRRLEEQYPHLHQERGELLLEVKNLSGSGVNNVSFQLH
                     KGEIVGISGLMGAGRTELMKVLYGALPKTAGSIELNGKAISNHCPQDGLNNGIVYISE
                     DRKGDGLILGMSVKENMSLTSLDHFSKAGSIRHDAEKLAVDDFIEMFNIKTPSREQQI
                     GLLSGGNQQKVAIAKGLMTRPNVLILDEPTRGVDVGAKKEIYQLINEFKKDGLSILMV
                     SSDMPEVLGMSDRILVMHEGQISAEFSRAEATQEKLLAAAIGKSTGLN"
     gene            5335..6303
                     /gene="rbsC"
                     /locus_tag="PXE50_001778"
     CDS             5335..6303
                     /gene="rbsC"
                     /locus_tag="PXE50_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005753457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter permease"
                     /protein_id="HDL5622673.1"
                     /translation="MATQTKQFQLGRFLIEQRSFVALFILIVSVSMINPDFFSVDNIL
                     NILRQTSVNAIIAVGMTFVILIAGIDLSVGSVLALTGAVAATLVGSELPILLVIPLVL
                     LLGTAFGGISGAIVAKGKVQAFIATLVTMTLLRGITMVYTDGRPISTGFSDQADAFAF
                     IGTGYLFGIPVPIWIMAVVFGLAWYILKHTPIGRYIYALGGNESATQLSGINVNKIKI
                     FVFAVSGFLSALAGLIVTSRLSSAQPTAGVSYELDAIAAVVVGGTSLMGGKGRVMGTL
                     VGALIIGFLNNALNLLDISSYYQMIAKALVILAAVLADNYLGTKKV"
     gene            6326..7204
                     /gene="rbsB"
                     /locus_tag="PXE50_001779"
     CDS             6326..7204
                     /gene="rbsB"
                     /locus_tag="PXE50_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006995182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter substrate-binding protein
                     RbsB"
                     /protein_id="HDL5622674.1"
                     /translation="MKKLTTIASAVMLSLSVAATASAKETIALAVSTLDNPFFVSLKD
                     GAQKKADELGYKLVVLDSQNDPAKELSNVEDLTVRGAKVLLINPTDSEAVGNAVAIAN
                     RNKIPVITLDRGAAKGEVVSHIASDNVAGGKMAGDFIAQKLGSGAKVIQLEGIAGTSA
                     ARERGEGFKQAIEAHKFNVLASQPADFDRTKGLNVTENLLSSKGDVQAIFAQNDEMAL
                     GALRAVSSAKKEVVIVGFDGTDDGVKAVESGKLAATIAQQPELIGSLGVETADKVLKG
                     EKVEAKIPVDLKVISK"
     gene            7325..8254
                     /gene="rbsK"
                     /locus_tag="PXE50_001780"
     CDS             7325..8254
                     /gene="rbsK"
                     /locus_tag="PXE50_001780"
                     /EC_number="2.7.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribokinase"
                     /protein_id="HDL5622675.1"
                     /translation="MKKLTVLGSINADHVISVPYFAKPGETLTGHSCHIAYGGKGANQ
                     AVAAARLGAKVSFIGCIGSDDIGKAMKSAFEQDGIDTRSIKTIPNEMTGIAMIQVAES
                     GENSIVISAGANGHLDETVVAKCAAEITQADYLLMQLETPLPAIVQAAKLAQQNGTKV
                     ILNPAPARALPDELLNLLDMITPNETEAEILTGVKVVDEASAIQAAQVFHQKGIEKVL
                     ITLGSKGVFVSENGVGKIVAGFRVQAVDTTAAGDTFNGALVTAMLEDKPLDQAIRFAH
                     AAAAISVTRKGAQPSIPTRQETLDFLSQQAVSF"
     gene            8268..9278
                     /locus_tag="PXE50_001781"
     CDS             8268..9278
                     /locus_tag="PXE50_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDL5622676.1"
                     /translation="MATMKDIARLAQVSTSTVSHVINNSRFVSEEIRERVQRVVKELN
                     YTPSALARSLKVNETKTIGMLVTATGNPFFAEVMAGVEQYCQQHQYNLIIATTNGDTE
                     RLQHHLQMLMQRKVDGLLLMCGDTRLNADESLNIPLPLVVLDWWFTELNADKIFENSI
                     SGGYLATKTLIEAGHSKIAIITGNLKKSLAKNRLEGYKKALAEANIPLNPNWVFESHF
                     DFAGGVNGMNALLAQSEKPTAVFACSDTIALGAYQAIWQQGLRIPQDISIIGYDDIEL
                     AKYLSPPLSTISQPKAELGRLAVETLLKRIRFKSTDFQTIMLEPELVLRHSIQTINKN
                     AE"
     gene            complement(9314..9943)
                     /locus_tag="PXE50_001782"
     CDS             complement(9314..9943)
                     /locus_tag="PXE50_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDL5622677.1"
                     /translation="MTAPTQILLIDDHPLMRQGMRQLLELDHQFSVVGEASNGTDGIK
                     LALRLEPDVIILDLNMKGLSGLDTLRSLRAQGIDARIIVLTVSDEQSDVFALMDAGVD
                     GYLLKDTDTPELLDNIRKAAAGEVVLSETVRQHLLNRQPENDPLSCLTDRELDVLQWL
                     ATGMSNKQIAAQLFISEETVKVHIRNLLRKLNVHSRVAATVLYLEQQKG"
     gene            10141..12300
                     /gene="rlmKL"
                     /locus_tag="PXE50_001783"
     CDS             10141..12300
                     /gene="rlmKL"
                     /locus_tag="PXE50_001783"
                     /EC_number="2.1.1.173"
                     /EC_number="2.1.1.264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 23S rRNA
                     (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA
                     (guanine(2445)-N(2))-methyltransferase RlmL"
                     /protein_id="HDL5622678.1"
                     /translation="MTNQTTYFATAARGFEEILKTELEQICAAECKVAQGGVHFTTTQ
                     KGAYQALLHSRLASRILLPLISTKIFSDSDLYASIVSFNWADLFDPRDTFYIDFSGTN
                     REIRNTQFGAMRVKDGIVDYFERKGFARPTVDKDNPDVRIHVYLDRENVVVSLDLSGD
                     ALHIRGYREETGKAPLRETLAAAIILRSGWKVGTPLVDPMCGSGTLLIEAAQMAANIA
                     PQLHRKHWGFNAWKGHQQAMWKAVLDEAFRNVELGAVGENCNSSLQKMFFGFDLDHRV
                     LTKAKQNAKNAGVDHLIQWQQGDVAALKNPIPEKIGTVVCNPPYGERLGTTPALIALY
                     SVFGQRLKQQFAGWNASIFSGEPELLNCLRLRSARQFKAKNGPLDCVQKNYSISEHNK
                     RSDLDENLQFEQNAQVAPDFANRLTKNIKKIEKWAKQQGIDAYRLYDADLPEYNLAVD
                     RYGDHIVVQEYQAPKNIDEQKARQRLLDAVSATLYVTGVETNKLVLKVRQKQKGTNQY
                     EKLANKGEYFYVNEYGAKLWVNLTDYLDTGLFLDHRLTRKMVGEMAKGKTFLNLFAYT
                     GSATVHAALNGAKSTTTVDMSNTYLNWAEQNLELNNLSLRHHRLFQADCLQWLAECRE
                     RFELIFVDPPTFSNSKRMENSWDVQRDHIELMKQLKRILTADGTIVFSNNKRGFKMDF
                     DGLAALGLTAENISHKTLPLDFERNPQIHNCWIVKNV"
     gene            12477..12956
                     /gene="trmL"
                     /locus_tag="PXE50_001784"
     CDS             12477..12956
                     /gene="trmL"
                     /locus_tag="PXE50_001784"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015432117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HDL5622679.1"
                     /translation="MLDIVLYEPEIPQNSGNIIRLCANCGFRLHMIEPFGFGWDDKKL
                     RRSGLDYHEFVDIQKYKNFEDFLERAKPKRLFALTTRGEQNHSDVKYELGDFLMFGPE
                     SRGIPKPLLAEMPMSQKIRIPMCKDSRSMNLSNSVAVVVYEAWRQFGYQNAVAAQSI"
     gene            complement(13050..>13848)
                     /locus_tag="PXE50_001785"
     CDS             complement(13050..>13848)
                     /locus_tag="PXE50_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Bro-N domain-containing protein"
                     /protein_id="HDL5622680.1"
                     /translation="EQKSVRSHYDEEKDKWYFSIIDVIAILTESLDPSAYWRKLKQRL
                     KAEGNETVTNCHGLKMPSADGKMRLTDVADTEQLFRLIQSIPSPKAEPFKQWLAKVGY
                     ERLQEINDPSQSLDRARENWQKMGRSEKWIQQRMMGQETRNKLTDYWKSSGVEQPQDF
                     AFLTNVIHQEWSGLSVQKHKSLKGLKSQNLRDHMSEAELLFTALAELSSRQIAESMQA
                     VGVDENAQAGKQGGNIAKNARQELENKTGKSVVTGENFLPPAKNEEE"
BASE COUNT         3998 a         2712 c         3216 g         3922 t
ORIGIN      
        1 ttatgattga gtgtattttg aaaagggaaa taaaaaaatc tacatctgaa tcagaacggt
       61 tattctgttt tgtcagatgt agattttatt taaaaagaaa atcaaaaaga gaagtgaatt
      121 attcagctaa cgctttacgt tgagcttcaa ctagctggct aatgccttgc ttcgctaaat
      181 ctagcaatgt cagtaattct tggtgcgaga acggttcgcc ttctgccgtg ccttgtactt
      241 ccactaaacg accatcttcg accatcacca cgttcatatc agtttcagcg ttggaatctt
      301 ccagatattc taaatcgcac accgcttcgc ctgctacaat accgacagaa attgctgcga
      361 ctaaaccttt cattgggtta gtttttagtg ttccattagc tactaactta ttcattgcat
      421 cgtacaatgc tacgcacgca ccggtaattg aggcggtgcg agtgcctcca tcggcttgaa
      481 taacatcaca atctacggta acggtacgtt cgcctaaggc ttttaaatct accaccgcac
      541 gcagagaacg ggcaatcaag cgttggattt ccattgtgcg tccgccttgt ttgccttttg
      601 ccgcttcacg ctgagtgcga gagtgggtgg ctcgtggcaa cataccatat tctgcggtaa
      661 cccaaccttg ttgctgacct tttaaaaagc gtggcacgct ttcttctacc gtagcgttac
      721 acaatacttt ggtttcgcca aactcaatta ataccgagcc ttcggcatag cgagtgtagt
      781 tacgggtaat tttaatttct ctaacttggt tgtttgctcg attatttgga cgcattttct
      841 tttccttttg ctaaaatttt taccatttta gcaaagaaca cagtaaaatg tgatttttct
      901 ttagcaaaga atttacatag ccctcgcccc ttgtgggaga gggacggatt tttcttcgtt
      961 cagaagaaaa atcagggaga ggggtaagcg gttattttta tctcaaattt tacaaattcc
     1021 tccctctctc tgaaaaatat ttctgaacga aatatttttc ggtctctctc cctcaagggg
     1081 agagagcttt acttataaaa acacaaggaa taccaatgat ttatagtatg acagcatttg
     1141 cccatttaga aatgaaaaaa gagtggggca atgcggtgtg ggaaattcgc tcggtaaatc
     1201 aacgcttttt agaaacctat tttcgtttgc cggagcagtt tcgcaaccta gaaatgacct
     1261 tgcgtgagcg tttacgttct gcactgacac gaggcaaagt agagtgtagc ttacgcattg
     1321 atttaagcaa aacccaaaac agtgaaattg cgttaaacaa agaatatgcc gcacaggtgg
     1381 ttcaatcatt aaaatggtta aaagaaaccg caaatgaagg cgaaatcaac cttgttgatg
     1441 tgctacgttt cccgggcgtg gtggataatg aaagccaaga tttagaccaa attgctcaag
     1501 atttattagc cggctttgaa caaattctgg cagattttat cgcaatgcga gccagagagg
     1561 gcgagaacgt gcaagccctg atcttacaac gtttagaagc aatttcagtt gaggctgcaa
     1621 aggtacaagc ccaaatgccg gaaattctgc aatggcagaa agatcgttta caacaacggt
     1681 tcgatgaact gaatttacag cttgatccac aacgcttaga acaagaaatg gtgttacttg
     1741 cccaacgtgt tgatgtggcg gaggaattag accgcttgca attacacgtt aaagaaacca
     1801 ccaatatcct gaaaaaaggc ggtgcggttg ggcgtaaact ggattttatg atgcaagaac
     1861 taaaccgtga atccaacacg ctcgcctcaa aatcgattaa tgcggacgtg accaattcgg
     1921 cggtggagct gaaagtgttg atcgaacaga tgcgtgaaca aattcagaat ttagaatagg
     1981 acagattatg gcaatgaatt tcaagcaagt gagccagagc tatccaaatc tctgcgtgcc
     2041 gctttctcag tattgtttaa ttgaaatcgc aggggtagat gctgagaaat atcttcaagg
     2101 gcaattaacc tgcgatgtgg caaaaatttc ggtgggcgaa catacgctaa ccagccattg
     2161 tgatccgaaa ggcaaaatga gtgcgttact gcgtttgtat cgtgcagaaa atgagaaatt
     2221 tatggcgatc attcaccgca gcttattgcc tgaagccctg acgcaactta aaaaatatgc
     2281 ggttttttca aaagtgacct tcacggaatt agacacccca ctttatggta tggcaggtga
     2341 agcagcattt gcaaaattaa gcgaaaatat gaccgctttg cgtttaacca caggacagcc
     2401 tcgggccatt gtttggggcg aagagcttga aacgactgcc gatgaacagc tctggacatt
     2461 aatggatatt caagacggca ttcctgttct cttgcaacaa aaccagtttg agctgattcc
     2521 acaggcaacc aatttacagg cacttgaatc tgcgatttca ttcaccaaag gttgctacat
     2581 cgggcaagaa acggtagcga gagcgaaata tcgtggggcg aataaacgtg ctttatttac
     2641 ccttgccggc aactttgaaa gcgaaatcag cttaccggaa gttgcttctg cgattgaaat
     2701 gcaactgggc gaaaattggc gagcaaccgg cactgtgttg accagtgcga ctgatgaaaa
     2761 taccctgtgg gtgcaagtgg tgctgaataa agatgttgaa cctaacacca agtttagagc
     2821 caatggtgta gcgttggaaa tggtcgagtt accttatagt ttggcagaaa atgagtaaaa
     2881 cgaacggtca tcagggtatg accgtttttt tatatctgat cagggtgatg aatcatcaca
     2941 aaacgttccc acaactgctc ttcggtttcg atattatcag gatctttgat aatgcagttg
     3001 gtaatcgggc aaactttctg gcaagtcggc ttttcataat gcccgacaca ttcggtacat
     3061 aacaccggat cgatgatata aatatcatcg cccaccgaaa tcgcctcgtt cgggcattcc
     3121 ggcaagcaca tatcacagtt ggtacatttg tgggtaatta ataaagccat agtttatatt
     3181 gagaaaataa aaattaaaca agcggtcgat tttgcaaaaa aatttgcaaa tcttaccgct
     3241 tgtcactaaa tgctacctat tataaagcaa aataatttga actacttcac atttttgcaa
     3301 tttggttgtt tatccgatta agaaaatttt ttatgatgcc atcgaaacgt ttcgatggag
     3361 tattttccaa cgtgatggag cgaaaataaa ggggttagta tgaaaaaaac gctaaatcta
     3421 aatgcacaac tttcgcacag tattgcgaca ctcgggcata ccgatagttt aacggtttgc
     3481 gatgccggtt tgccgattcc aaacacaata gagcggatcg atttggcttt aaccgccggt
     3541 gtgccaagtt ttttacaaac atttgatgta gtagttagtg aattatttgt tgaacgagtg
     3601 ctacttgctg aagaaattaa acataaaaat ccgcaagtgt tagcagctct tttggagcgt
     3661 ttaacccaat tagaacaaac tcaacagaat aaaattcaaa ttgattatgt gaaccacgaa
     3721 atctttaaag agcagacaca ttacagtaaa gctgttgtgc gttcgggtga gtgttcaccg
     3781 tatgccaata ttattttata ttcgggcgtg ccgttttagg gtggaatgat ggaaacctta
     3841 ttaaaaatga gcgggataga taaagaattt cccggcgtga aagccttgag caatgcgtgc
     3901 ttatctgttt acggtgggcg agtaatggca ttaatgggcg aaaatggggc aggtaaatcc
     3961 accttgatga aagtattgac ggggatttat agcaaagatg ccggctctat tagctattta
     4021 ggcaaagaag ttacctttaa aggcccgaaa gattcacaag aagccggtat tagcattatt
     4081 caccaagagc tgaatttagt cggtaattta accattgctg aaaatatttt tttgggccgt
     4141 gagtccaaaa ccgcttgggg agctattgat tggaaaaaaa tgtatgccga ggcggataaa
     4201 ctgcttgccc gacttggggt aaaacacagt agccatcagc tttgtgcgga gttatccatt
     4261 ggcgagcagc aaatggtgga aattgcgaaa gccctgagtt ttgagtctca agtaattatt
     4321 atggacgaac cgaccgatgc tttaaccgat acagaaacag catcgttgtt taaagttatt
     4381 cgagagttaa aagcggaaaa tcgaggcatt gtttatattt cccatcgttt aaaagagatt
     4441 tttgaaattt gtgatgatgt gacggtgcta agagacgggc aatttatcgg cgagcgagta
     4501 attgccgata ttgatgaaga tcagttaatt gaaatgatgg ttggtcgccg tttggaagag
     4561 caatatccgc atttacacca agagcgtggc gagttattac ttgaagtgaa gaatttaagt
     4621 ggaagtgggg tgaataatgt gtcattccaa ttacacaaag gtgaaattgt gggtatttcc
     4681 ggcttaatgg gggcagggcg tacagaatta atgaaggtgc tttatggtgc attgccgaaa
     4741 acagccggct cgatagagtt aaatggaaaa gcgatttcca accattgtcc gcaagatggg
     4801 ttgaataacg gcattgtgta tatttcagaa gatcgtaaag gcgatggtct gattttggga
     4861 atgtcggtaa aagaaaatat gtctttgacc tctctcgatc atttctccaa agccggcagt
     4921 attcgccacg atgcagaaaa attggcggtc gatgatttta ttgagatgtt taacattaaa
     4981 accccaagtc gggagcaaca aatcgggctg ctttccggtg gtaatcagca aaaagtggcg
     5041 atcgctaaag ggttgatgac ccgcccgaat gtgctgattt tagacgagcc gacacggggt
     5101 gttgatgtgg gggcgaaaaa agagatctat caattaatta atgaatttaa aaaagatggg
     5161 cttagtattt tgatggtttc gtccgatatg ccggaagtgt tgggaatgag cgaccgcatt
     5221 ttagtgatgc acgaagggca aatcagtgca gaattttcac gagcagaagc gacacaagaa
     5281 aagctactgg cagcagctat tggcaaaagt acaggattaa attaaggtgt gtttatggca
     5341 actcaaacaa agcagtttca acttggcaga tttttaatcg agcaacgttc ttttgtagcg
     5401 ttatttattt taattgtcag tgtttcaatg attaaccctg attttttcag cgtggataat
     5461 attttaaata ttctacgcca aacctcggtg aatgcgatta ttgcggtcgg aatgaccttt
     5521 gtgattttaa ttgcaggcat tgatttatcg gtcggttcgg ttttagcctt aaccggtgcg
     5581 gttgcagcga ccttagtcgg ttctgaattg ccgattttgt tggtgattcc gctggtttta
     5641 ttattaggga cggcatttgg tggtattagt ggggcgattg ttgctaaagg taaagtgcag
     5701 gcatttattg cgactttggt cacaatgacc ttattgcgtg ggattacgat ggtttatacc
     5761 gatggcagac cgattagcac cggcttttct gaccaagcag acgcctttgc gtttattggg
     5821 acaggctatt tatttggtat tcctgtgccg atttggatta tggcggtagt gtttgggtta
     5881 gcttggtata ttttgaaaca caccccgatt gggcgttaca tttacgcttt aggtggcaac
     5941 gaatcggcaa cccagctttc aggcatcaat gtgaataaaa ttaagatctt cgtatttgcc
     6001 gtgagtggtt ttttatctgc tcttgccggc ttaattgtga cttcacgtct ctcttctgct
     6061 cagccaacgg caggtgtgtc ctatgagtta gacgcaattg cagcggtagt tgttggtgga
     6121 accagtctaa tgggcggtaa agggcgtgta atgggaacgc ttgtcggggc attaattatc
     6181 ggtttcttaa acaatgccct taatttattg gatatttctt catattatca gatgattgct
     6241 aaagcgttgg ttattttagc agctgtatta gctgataatt atctaggcac taaaaaagtt
     6301 taatctatct ttaaaggaga tttctatgaa aaaattaact acgattgcat cagcggttat
     6361 gttaagttta tcggttgcag ccactgcttc ggcaaaagag actatcgctc ttgcagtatc
     6421 gactttagat aacccattct ttgtgagcct taaagacggt gcacagaaaa aagcagatga
     6481 attaggctac aaattagtgg tgcttgattc ccaaaatgac ccggctaaag agctttccaa
     6541 tgtggaagac ttaacggtgc gtggggcaaa agtgttattg attaacccaa ccgattcgga
     6601 agcggtcgga aatgcggtgg ctattgcaaa tcgcaacaaa attccggtta ttacacttga
     6661 ccgtggtgca gcaaaaggcg aagtggttag ccatatcgct tccgataacg ttgccggcgg
     6721 caaaatggcg ggagatttca ttgctcagaa attaggctca ggggcgaaag tgattcaatt
     6781 agaaggcatt gccggcactt ccgccgctcg tgaacgtggt gaaggcttta aacaagcgat
     6841 tgaagcacat aaattcaatg tattagccag tcaaccggct gattttgacc gcactaaagg
     6901 cttaaatgtg actgaaaact tgctctcaag caaaggggac gtacaagcta tttttgctca
     6961 aaatgatgaa atggcactag gagctttgcg tgcagtgagt tcagcgaaga aagaggttgt
     7021 aattgtgggc tttgacggca cagatgatgg cgtaaaagcc gttgaaagcg gtaaacttgc
     7081 cgcaacgatt gctcaacaac ctgaactgat tggctcatta ggcgtagaaa ctgccgataa
     7141 agtgctaaaa ggcgaaaaag tggaagcaaa aattccggtt gatttaaagg ttatttcaaa
     7201 ataattatac ttgaagatag cgttcgtctc tgacgaacgc tttgaattaa taaaatagca
     7261 ctcgtcagag actagtgcta tcagaatcct agttttgttg tactaggtaa tttgagggct
     7321 taatatgaaa aaactcaccg ttctcggtag cattaacgct gatcacgtga tttccgttcc
     7381 ctattttgcc aaaccggggg aaacgctcac cggacatagc tgccacattg cttatggcgg
     7441 taaaggggca aatcaggcgg tggcggcagc acgtttggga gctaaggttt ctttcatcgg
     7501 ttgtattggc agtgatgaca tcggcaaagc aatgaaatca gcctttgagc aagatggcat
     7561 tgacactcgc tcgattaaaa cgattccgaa tgaaatgacc ggcattgcaa tgattcaagt
     7621 ggcggaatcg ggcgagaaca gtattgtgat ttcagccgga gcgaacggtc atttggatga
     7681 aacggttgtg gcaaagtgtg cagccgaaat cacacaggcg gattatttgc taatgcagct
     7741 agaaacaccg ttgccggcga ttgtgcaagc agcaaaattg gctcagcaaa acggcacgaa
     7801 agtaatatta aaccctgcgc ctgctcgagc gttacccgat gaactgttaa acttactgga
     7861 tatgattacc ccaaatgaaa cggaagcgga aatattaacc ggtgtgaaag ttgttgatga
     7921 agccagtgcg attcaagccg cacaagtgtt tcaccaaaag ggcatcgaaa aagtgttgat
     7981 tacacttggc tcaaaagggg tatttgtaag cgaaaacggt gtaggcaaaa tcgttgcagg
     8041 cttccgtgtt caagcggtgg ataccactgc cgcaggggat acttttaacg gagcattagt
     8101 gactgcaatg ttagaagata aaccgctgga tcaagccatt cgttttgctc acgcagcggc
     8161 agcgattagt gtgactcgca aaggggctca accttctatt ccgacccgtc aggaaacact
     8221 ggattttcta agccaacaag cggtgagttt ttaggaaaat tttgcaaatg gcaacaatga
     8281 aggatattgc acggcttgca caggtttcca cctcgaccgt ttctcacgtt atcaacaata
     8341 gccgatttgt cagcgaggaa attcgggaaa gagtgcagag ggtggtgaaa gaactgaatt
     8401 acacgccttc tgcattggct cgtagcctca aagtgaatga aactaaaacc atcggaatgc
     8461 tggtaacggc aaccggcaat ccgttttttg cggaggtgat ggcgggggtg gagcaatatt
     8521 gccagcaaca tcaatataac ctgattattg ccactaccaa cggtgacacc gagcgtttgc
     8581 aacaccattt gcaaatgctg atgcaacgaa aagtagatgg cttgttactg atgtgtggcg
     8641 ataccagatt gaatgccgat gagagcttga atattccgct gccattggtg gtgttagact
     8701 ggtggtttac cgagctcaat gcagataaaa tctttgaaaa ttcaatatcc ggcggctatc
     8761 tcgcaacaaa aaccttaatt gaagcagggc attctaagat tgcgattatt actggaaacc
     8821 taaaaaaatc attggcaaaa aatcgtttag aaggctacaa aaaagcactt gccgaggcga
     8881 atattccact caatccaaac tgggtgttcg aaagccattt tgattttgcc ggcggggtta
     8941 atggaatgaa tgctttgctt gcccaaagcg aaaagccgac agcggtattt gcctgtagcg
     9001 acaccattgc tctaggggct taccaagcaa tctggcaaca aggtttacga ataccgcaag
     9061 atatttcgat tatcggctat gacgatattg aactggcaaa atacctttcc ccaccgctga
     9121 gtaccattag ccagcccaaa gcggaactcg ggcggcttgc ggtggaaact ttgctaaaac
     9181 gaattcgttt taaatccact gattttcaaa ccataatgct tgaacctgaa ttagttttaa
     9241 ggcattcaat ccaaacaata aacaaaaacg ctgaataatg tgaagttatt cagcgttttt
     9301 tatccgattt caattagcct ttttgctgtt ccaaataaag cacggtggcg gcaactcggg
     9361 aatgcacgtt taatttacgc agtaaattgc ggatatgcac ttttacggtt tcttcggaaa
     9421 taaagagctg agccgcaatt tgtttgttcg acataccggt tgcgagccat tgtaaaacat
     9481 ccagttcacg atctgttaag caacttaaag gatcattttc tggctggcgg ttgagtaaat
     9541 gttggcgaac ggtttcgctt aataccactt caccggcagc cgctttacgg atattatcta
     9601 gtagttccgg ggtgtcggta tcttttaata aatagccgtc cacaccagca tccattaatg
     9661 caaatacatc ggattgctcg tctgacactg ttaaaacaat gattctggca tctatacctt
     9721 gagcgcgcaa tgagcgtaaa gtatctagcc ctgaaagccc tttcatattt aaatccagaa
     9781 taatcacatc cggctcaagt cgtaatgcaa gtttgatacc gtcggtgccg ttgcttgctt
     9841 cacccactac actaaattgg tgatctaatt ccaatagttg acgcattccc tgacgcatta
     9901 atgggtggtc gtcaatgagt aaaatttgag ttggagctgt catttatttc tcctttcctt
     9961 tctcttaatc ggttaatttt gcaattatta attcaaaata gcaagtttag ggatttacta
    10021 aatgccgctt ttttgatctt agctaatttt taactaaaaa agaaattgca aaactttgca
    10081 agaaaaagac cgcttgttcg gctataatta ctgccaattt ttatttcaag tgtgaaaaga
    10141 atgacaaatc aaacaaccta ttttgccacg gcagcccgtg gttttgagga aatactaaaa
    10201 accgaactgg agcagatttg tgcggcagaa tgcaaagtcg ctcaaggcgg tgtgcatttt
    10261 accaccacgc aaaaaggggc ttatcaggca ttattacaca gccgtttagc ctctcggatc
    10321 ttactgccgc tcatcagcac caaaattttt agtgatagcg atttatatgc ttccatcgtg
    10381 tcatttaact gggcggattt attcgatccc cgtgatacct tttacattga tttcagcggc
    10441 actaaccgag aaatccgcaa cacccaattt ggggcaatgc gagtgaaaga cggcattgtg
    10501 gattactttg aacgcaaagg ttttgcccgc ccaacagtag ataaagataa tccggatgtt
    10561 cgcattcatg tttatttgga tcgtgaaaat gttgtggttt cgcttgattt aagtggagat
    10621 gccttacata ttcggggcta tcgggaagaa accggtaaag ctccgttgcg tgaaacattg
    10681 gcggcagcca ttattttgcg ttccggctgg aaagtcggca cgccattggt tgatccgatg
    10741 tgtggttcag gcacgttact gattgaagca gcacaaatgg cagcgaatat tgcccctcaa
    10801 cttcaccgta aacattgggg ctttaatgcg tggaaagggc atcaacaagc gatgtggaaa
    10861 gccgtgttag atgaggcatt ccgaaatgtt gaattgggtg cggtagggga gaattgcaat
    10921 tcgtccctac aaaaaatgtt cttcggtttt gatctcgatc atcgtgtgct gactaaagca
    10981 aagcaaaatg cgaaaaatgc aggggtagat catctcattc aatggcaaca aggtgatgtg
    11041 gctgcgttaa aaaatccgat tccggaaaaa atcggcacgg tggtgtgtaa ccccccttat
    11101 ggtgaacgtt taggcacaac gccggcgtta attgctcttt attcggtgtt cgggcaacgc
    11161 ctaaaacagc aatttgccgg ttggaatgcc tcaattttta gcggcgagcc tgaattgtta
    11221 aattgcctgc gtttacgttc agcccgtcaa ttcaaagcga aaaacggtcc gttggattgt
    11281 gtgcagaaaa attactccat cagcgagcat aacaagcggt cagatttaga tgaaaattta
    11341 caatttgaac agaatgctca agtcgctccg gattttgcaa atcgcttaac caaaaatatc
    11401 aaaaagatcg aaaaatgggc gaaacaacaa ggcattgatg cctaccgttt atacgatgcc
    11461 gatctgcctg aatataattt agcggtggac agatatggcg accacattgt tgtgcaggaa
    11521 taccaagccc cgaaaaatat tgatgagcaa aaagcccgcc aacgcttgtt agatgcagtc
    11581 tctgctacgc tttatgtgac aggtgttgaa actaataaat tagtgttgaa agttcgccaa
    11641 aaacaaaaag gcacgaatca gtacgaaaaa cttgccaata aaggcgagta tttctatgtg
    11701 aacgagtatg gggcgaaact gtgggtgaat ttaaccgatt acttggatac gggtttgttc
    11761 ctagaccatc gcttaacccg taaaatggtg ggcgaaatgg caaaaggcaa aacattcctg
    11821 aatctgtttg cctacacggg ttcagctacg gttcacgctg ctcttaatgg ggcaaaatcg
    11881 accactacag tggatatgtc gaacacctat ttgaactggg cggagcaaaa tttagagctg
    11941 aataatttat cacttcgcca tcatcgtttg ttccaagccg attgcttgca atggctggca
    12001 gaatgccgtg agcgatttga gctgattttt gtcgatccgc cgactttctc caactcaaaa
    12061 cgaatggaaa acagttggga cgtgcaacga gaccatattg agttaatgaa acagcttaaa
    12121 cgtattttaa ccgctgatgg taccattgtg ttctcgaaca ataagcgtgg ctttaaaatg
    12181 gattttgacg gtttggcagc attaggctta acggcggaaa atatttcgca taaaacctta
    12241 ccgttggatt ttgaacgcaa tccgcaaatc cataattgtt ggattgtgaa gaatgtatag
    12301 ataataccct cgacccttgt gggagaggga tagatttttc ttcgttcaga agaaaaatca
    12361 gggagagggt aagaagttac tgatgaaaga gttatttccc cctctctctg aaaaatattt
    12421 ctgaacgaaa tatttttcgg tctctctccc acaaggggag agagtaaggc taaaaaatgt
    12481 tagatattgt tttatacgaa cctgaaattc cgcaaaacag cggaaatatt atccgccttt
    12541 gtgccaactg tggctttcgt ttgcatatga ttgaaccgtt cggctttggt tgggacgata
    12601 aaaagctccg ccgttcgggg ctggattatc acgaatttgt ggatattcaa aaatataaaa
    12661 attttgaaga tttccttgag cgtgctaagc ctaaacgctt gttcgcctta accaccagag
    12721 gggagcagaa ccacagtgat gtgaaatatg aacttggcga ttttttaatg ttcgggccgg
    12781 aaagcagagg cattccaaag ccattattag cggaaatgcc gatgtcgcaa aaaatccgca
    12841 ttccgatgtg caaagacagc cgcagtatga atttatctaa ctcggtggcg gtggttgtgt
    12901 atgaggcgtg gcgacaattc ggctaccaaa atgcggtagc ggcacaatct atttaacttg
    12961 caagcggtgt gattttggct attttttgca agtttgtggt caaggttggg ggaggctcga
    13021 ccttgactaa ttaagaacat ctattgtgtc tattcttctt catttttagc tggaggtaaa
    13081 aaattctctc cggtaacaac tgatttacct gttttattct ccaattcctg acgggcattt
    13141 ttggcaatat tgccaccttg ttttcctgct tgggcatttt catcaacccc aactgcctgc
    13201 atactttctg caatttgccg actggaaagt tcagcaagtg ctgtaaataa caattcagct
    13261 tcgctcatat gatctcgcag attttggctt tttaaacctt taagcgattt atgcttttgt
    13321 acagatagtc cgctccattc ttgatgaatc acattggtta aaaatgcaaa atcttgtggc
    13381 tgttcaaccc ctgacgattt ccaataatcg gtcagtttat ttcgggtttc ttgtcccatc
    13441 attctttgct gaatccattt ttcacttcgt cccatcttct gccaattctc ccttgctcga
    13501 tctagacttt gacttggatc gtttatttcc tgtaagcgtt cataacctac ttttgctaac
    13561 cattgtttga agggctctgc tttcggacta gggatagatt gaataagtcg gaaaagttgt
    13621 tcggtatctg ctacatcagt caaacgcatt tttccgtcag cagagggcat tttcaacccg
    13681 tgacaatttg tcacggtttc attgccttct gcctttagcc tctgttttag cttacgccaa
    13741 taagcagagg gatctaggct ttcggttaaa atagcaatca catcaataat agaaaaatac
    13801 catttatctt tttcttcatc gtaatgactg cgtacagatt tctgttca
//
LOCUS       DANLZQ010000072        13835 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.072, whole genome shotgun sequence.
ACCESSION   DANLZQ010000072 DANLZQ010000000
VERSION     DANLZQ010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13835)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13835)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13835
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.072"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            16..1098
                     /gene="serC"
                     /locus_tag="PXE50_001786"
     CDS             16..1098
                     /gene="serC"
                     /locus_tag="PXE50_001786"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HDL5622681.1"
                     /translation="MTEIYNFSAGPAMMPKKVLEKAQQELLNWLDQGTSVMEVSHRGK
                     LFMELAAQSEADLRKLYNVPDNYRILFLQGGARGQFAAIPMNLIGKKGKALYLNSGHW
                     SATAAKEARNFAEIDEINILETEPQLKVSRLDFSDIAEQYDYIHYCTNETISGVEIFD
                     IPNVGNTPLVADMSSNILARGIDINKFGVIYAGAQKNLGPAGITIVIIRDDLIGNARK
                     DTPSIWNYATQRDADSMINTPPTFAWYLCSLVFQHLLAEGGLKATEERNLAKATLLYE
                     YLDSSTFYYNTVAHENRSLMNVTFTTGNDELNAKFVAEATACGLQALKGHKVLGGMRA
                     SIYNAMPIDGVKALIEFMKVFEQRNA"
     gene            complement(1155..2132)
                     /locus_tag="PXE50_001787"
     CDS             complement(1155..2132)
                     /locus_tag="PXE50_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium/sodium antiporter"
                     /protein_id="HDL5622682.1"
                     /translation="MTLAVAAIIGGLIILVWSADRFVEGAASTARHFGMTPLLIGIVV
                     IGFGTSAPEMLVSASSALSGSPGIALGNAYGSNITNIALILGLTAIIKPLSVNSDVLK
                     KELPILLAVTLLSAYLVYDANVTQLDAIILLAVFFVYMAWTIITAMKSKNDALSLDVD
                     AELTNSAKMGLGKSILWLIIGLVSLVISSQFLVWGAVEVAKFFGVSDLVIGLTIVAVG
                     TSLPELASSIAAARKGEVDLALGNIIGSNLFNTLAVVGIAGAIEPMQVSAEVFSRDVL
                     MMSALTFLLFIFGINLYRRTEGGRINRLEGLLLFAAYVGYNFYLFKTAG"
     gene            2244..4811
                     /gene="glnD"
                     /locus_tag="PXE50_001788"
     CDS             2244..4811
                     /gene="glnD"
                     /locus_tag="PXE50_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     uridylyltransferase/uridylyl-removing protein GlnD"
                     /protein_id="HDL5622683.1"
                     /translation="MMKNSNELKTLLSAFTEQQRQAFQSENVLSLLAQRSQFYDQLLQ
                     ALWQDFGLAQYEHITLLAVGGYGREEMFPLSDLDILVLTEKPLEEAIQQRLNELFALL
                     WDSKLQLGTSVRTLEECIQIGKAEISVATNMLEGRFLLGNKSLWLRLKEALYQPDFWD
                     IKAFFRAKMAEKNERYARYHNTSYNLEPDLKHSPGGLRDLHLISWIMLRHYGVSSFVD
                     LLNKGLLYPEEYKELIAAQAVLFRMRFALHLQLKRYDNRLRFDRQLQLSEILGYQGEA
                     NQAVELMMRDYFQATKSISQLSQLLLNSFEQAYVNELQKNAQKQPLDQYFYRQEQQLF
                     VVERKIFKTQPTTMLDLFFHLTNDPTLIANADTLRQLRLCLQQQHEPMCFLPEMREKF
                     VQLFAQPKVISRAIVPMHQLGFLSAYLPQWKGIEGLMQFDLFHIYTVDEHTVRVMLNL
                     ENFSEDPSRAFFPLCHQLFATLSEKPLLYLAALFHDIGKGREGEHAQVGALDMREFAE
                     LHGFSQAQINDMVWLVAEHLTMSITAQRRDIHDPQIISEFAKKVQNQTALSSLLCLTV
                     ADICATSESLWNDWKASLFTQLYQFTLQQLAQNLNYQAVAQEHRLQALELMKFVLSAD
                     ERIALNAFWQPCPERYFLHHTPTQLVWHALHYVKTRRLPMVLISNEYARGGTEIFVCC
                     QDQPQLFARIAQLLSQKRISIHDAQIITTENGVVLDSFIVSERDGDDDLTDERCMQIQ
                     QAMMKMLSLTETGIKFTKKPVKHLSFKRKTRLRFLPPSSKQQTEFELFTLDREGLLAQ
                     IGYIFNRLRLNLINAKITTIGERVEDFFVVSNDQGKALSEQEQLELKAILITELDSE"
     gene            complement(4988..5746)
                     /locus_tag="PXE50_001789"
     CDS             complement(4988..5746)
                     /locus_tag="PXE50_001789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005567524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDL5622684.1"
                     /translation="MITVKNLHHKIGNATILNNINLTIPNGGITALIGANGAGKSTLL
                     SLIARLQPIQQGEIHLNELNIANTASQTIARQLAILTQDNVIHSRITVKDLLLFGRYP
                     HHQGRITSHDNAIVEEALVRFDLSTFSHRFLNELSGGQRQRALIAMTFCQQTDHILLD
                     EPLNNLDMFHARELMKLLRKLTDELALTTIMVVHDINIAAAYADTIIAMKDGGIKMIG
                     TPKEIITTENLKTVFNLDAEVLECQGKPLVIHHI"
     gene            complement(5766..6642)
                     /locus_tag="PXE50_001790"
                     /pseudo
     CDS             complement(5766..6642)
                     /locus_tag="PXE50_001790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607611.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
     gene            complement(6695..7663)
                     /locus_tag="PXE50_001791"
     CDS             complement(6695..7663)
                     /locus_tag="PXE50_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HDL5622685.1"
                     /translation="MFSFFRLNLFLLILLIPISASVGVADFHWSEIFHSSEQSQIFFI
                     SRLPRTLAVILVGATLAVAGMVLQIVLKNRFIEPSMIGTSQSAAIGILLASLLFPTSA
                     LLLKMSIATLSALMGMGLFMLLIRQLPPHQQLMLPLIGIVFGNVIEAISTFIAYETDS
                     LQVLSIWFSGDFSGILAGRYELLWITAILAVVVYVMADQLTIAGLGENISTNLGINYK
                     QMTWLALIVVAMITAIVVVTVGQIPFIGLVVPNIVSRIAGDRLRKNLPAVVVLGANLV
                     LICDILGRAINAPYEVPISTIFGIIGTVIFLYLLLKEKRAEEKARG"
     gene            complement(7757..8656)
                     /locus_tag="PXE50_001792"
     CDS             complement(7757..8656)
                     /locus_tag="PXE50_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005700892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL5622686.1"
                     /translation="MIKKALFALTATAVFAASAFAKDVTIPTARGEVTFKETPSKIAV
                     FDTGSLDTLQALGVKIDGMPEFKVLSYLKPSADKAVNVGTVFEPDLEALNSLNPDLII
                     VGTRTAKKFDEVSQIAKTIDMTDNGDKLIESGLQRLDSFGKLFNKEAETEKLKAEINT
                     LLDQTKAAVKGKGNGLIILVNGGKISAFGSGYRLSWIHDNLGIPMADSSIKNTGHGQP
                     VSFEFIQKLNPDWLFVLDRIAAIGQEGQSAQQVLDNELVRQTKAWKNGNIVYLSAASY
                     LAPGGYEQMKTDLTNIKTAFEKK"
     gene            8830..10293
                     /locus_tag="PXE50_001793"
     CDS             8830..10293
                     /locus_tag="PXE50_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HDL5622687.1"
                     /translation="MAEYSGTTQEKMKDKQVEQINISPHSIEAEQAVLGGIMLSNDHW
                     DNVAERVQPHDFYNYAHRIIFEQMAELVRHNKPIDIITLDQALKDKGVLQDVGGFAYL
                     AELSKNTPSAANILAYADIVRDRSDLRSVISAGNQIAEMGYKTKGRNSKEVLDEAERI
                     VFEIAEKRNNANEGPQRIDDILLKTLARMDTLSKNRHNGGVTGVSTGFVDLNKKTAGL
                     QPSDLIIVAARPSMGKTTFAMNLCENASLVDIEDKDDLDEQGNPKKKPAKPVLIFSLE
                     MPADQIMMRMLASLSRVDQTKIRTGQISDDEDTAKISSTMAILQERNNIYIDDSSGLT
                     PTELRSRARRIYRENGGLSLIMVDYLQLMRAPGFADNRTLEIAEISRSLKALAKELEV
                     PVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNDNSDLKGIAE
                     IIIGKQRNGPIGRVRLTFQGQYSRFDNYTGGHYDDEY"
     gene            10283..10588
                     /locus_tag="PXE50_001794"
     CDS             10283..10588
                     /locus_tag="PXE50_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgL domain-containing protein"
                     /protein_id="HDL5622688.1"
                     /translation="MNTKPTQPITLCAIYRSKAKEGMYLYVPKRDQFEQVPETLRQLF
                     GKPEFVMMFNLTGEKPLVRAKNEEVLQLLIEQGYYLQMPPPPENLHKAFIAQQKGEK"
     gene            10588..11037
                     /gene="nrdR"
                     /locus_tag="PXE50_001795"
     CDS             10588..11037
                     /gene="nrdR"
                     /locus_tag="PXE50_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HDL5622689.1"
                     /translation="MRCPFCSTEETKVIDSRLAASGYQIRRRRECISCKERFTTFESA
                     ELVVPYVIKNNGSREPFDAEKLRTGLRRALNKRPVSADDVEKAISQIIIQLQAMGERE
                     VPSRHIGTLAMNALKQLDKVAYIRFASIYLSFSDIEEFIKEIEKLKE"
     gene            complement(11111..11293)
                     /locus_tag="PXE50_001796"
     CDS             complement(11111..11293)
                     /locus_tag="PXE50_001796"
                     /inference="COORDINATES: protein motif:HMM:NF015431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL5622690.1"
                     /translation="MALLADSTVDRLVAENGLVEVLGETENPKFDLTMIYAAHRYPSS
                     IVRAFVGFVLEQVKAN"
     gene            complement(11262..11972)
                     /locus_tag="PXE50_001797"
     CDS             complement(11262..11972)
                     /locus_tag="PXE50_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL5622691.1"
                     /translation="MNLNTLRLFVAVIQHGSLSKASERLNVPIATISRQIADLEKELN
                     IQLFDRQKSGVKPTMAGQRLYEQVHLSIEQLATAKEVLFEEQGNLKGKLRLSASPACE
                     PVLAWIADFQAAYPQVQVHCTLTDRLLDLSADGIDVAFRIGQLHGEQFIAKKVGQIGS
                     KWVAHPKFLARFGTPSTVKDLKNFPIAAWAKNEASVITLGTGRQAVEIPYLFSSNDSY
                     AIEYMAKSSGSACRQHGG"
     gene            complement(11969..>13835)
                     /locus_tag="PXE50_001798"
     CDS             complement(11969..>13835)
                     /locus_tag="PXE50_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622692.1"
                     /translation="DRDEIWTAFIALESDQCPAIERLLTWCQKSSGQENIEPEALLLG
                     AIAVSWLFTSTDKRSRNGYINALAHLLWNRLEIALALFKEFIEVNDPYVMEGILSAIH
                     GAVAYSENSSGLKALALEIDNQIFNQPETEEIYPNVLVRDYARHIIEYSLQKDEYSSD
                     DIEIIRERITPPYRSSFPQNLPTNEEIDKKYHSDGQRIIIRSMTTEYGRGMCGYGDFG
                     RYTFEAKFRNWESYKFGNLINVDLLSNYACQMIFEQFGYDDKKHLEFDKETRSRYWRR
                     DDTNKIERIGKKYQWLALYEILARVMDNFPTFSNRYADEIGLEYITNLDNFYLPKTQI
                     KIVPPTKTDVFFQYINQKQCKTKHYFTIQNDELIDDWVKINDFPDVSNLLEVTINDEQ
                     WLVLERHDDFRELAKFGQKETYDRQMWLQIRSYLVKESQFSKAKNWLAQQDFMERWMP
                     EGNEHYGMNIHQFFAENTLNEWQEIYRHRENKSPSFKVIPSVDSHTWESTYGNDGISF
                     YAPIPMLYHGMKMKNAIKDGYWVDLQNNLVCFNPEINEKFQNSLLVKKDKFLDFLKEH
                     KLKLVWTVLGEKHAYKESKFLQELSGVYYLYGKNQQVQGSIKHFIQEIEHWGEKQ"
BASE COUNT         4427 a         2726 c         2721 g         3961 t
ORIGIN      
        1 tatacgaggt gaaaaatgac agagatatat aacttcagtg ccggcccggc aatgatgccg
       61 aaaaaagtac tcgaaaaagc gcaacaagaa ttattaaatt ggctagacca aggcacatca
      121 gtgatggaag tcagccaccg tggaaagcta tttatggagc tggcggcaca atctgaagca
      181 gatttacgca agctgtataa tgtgccggac aattatcgta ttctatttct tcaaggtggt
      241 gcaagggggc aatttgcagc cattccaatg aatttaatcg gtaaaaaagg caaagcgctt
      301 taccttaatt cagggcattg gtcggcaaca gcagcaaaag aagcacgtaa ctttgcggaa
      361 attgatgaaa tcaatatttt agagactgaa ccgcaactta aagtgagtcg tttagatttc
      421 agcgatattg cagagcaata tgattatatc cattattgca ccaatgaaac catcagtggg
      481 gtagaaattt tcgatattcc gaatgtcgga aataccccgt tagtggcaga tatgtcgtct
      541 aatatcttag cccgagggat tgatatcaac aaatttggag taatttatgc cggagcgcaa
      601 aaaaatctag ggcctgctgg cattacgatt gtgattattc gtgatgattt aattggcaat
      661 gcacgcaaag ataccccatc tatttggaat tatgcaactc agcgagatgc tgattcgatg
      721 attaataccc cgccaacttt tgcttggtat ttatgttctt tagtgttcca acatttactg
      781 gcagagggtg gtttgaaagc tactgaagaa cgtaatcttg ctaaagctac attgctttat
      841 gagtatttgg atagttcaac attctattac aatacggtag cacacgaaaa ccgttcctta
      901 atgaatgtaa cctttaccac gggtaatgac gagctaaatg caaaatttgt ggcagaagcg
      961 accgcttgtg gtttacaggc attgaaaggc cataaagtat taggtggaat gcgtgcctca
     1021 atttataacg caatgccgat tgatggggta aaagcactca ttgaatttat gaaggtattt
     1081 gaacaacgta atgcttaatt caagcttaag aatataaatt aaagagccac gtttgtggct
     1141 ctttgaattt ggcactagcc cgcagtttta aacaaataga aattatagcc tacataagcg
     1201 gcaaagagta ataagccctc taaccgatta attctgccac cttctgtccg acgatagagg
     1261 ttgatcccga aaatgaataa taagaaggtg agagccgaca tcatcaagac atcgcgagaa
     1321 aacacttccg ctgaaacttg cattggttct atagcaccgg caatccccac cacggctaac
     1381 gtattaaata agttagaacc gataatgtta cctaaagcta aatccacttc tcctttacga
     1441 gcagctgcaa tagaagaggc taattcaggt agtgaggtgc ctaccgccac aatagtaagc
     1501 ccgattacca aatcactcac accaaaaaat ttagccactt caactgctcc ccagactaag
     1561 aattgggaac taattactag cgatactaaa ccaataatta gccaaagaat ggattttcct
     1621 aatcccatct tagcactatt ggttaattct gcatcaacat ctaagcttaa tgcatcattt
     1681 ttacttttca ttgcggtaat aattgtccac gccatatata caaaaaacac agcaagtaaa
     1741 ataatcgcat caagttgagt gacgtttgca tcataaacca aataagcaga aagcagggtg
     1801 acagccagta aaatcggcaa ctcttttttt aacacatcgg aattaactga tagtggttta
     1861 attattgcgg ttaaacctaa aatcagcgca atattggtaa tgttagaacc gtaggcatta
     1921 ccgagagcga tacccggcga tccgcttaat gcagaagatg cagatacgag catctccggt
     1981 gcagatgtac caaaaccaat gaccacaata ccgattaaca atggtgtcat accaaaatgg
     2041 cgagccgtag aggctgcccc ttccacaaaa cgatccgcac tccaaactaa tataattaag
     2101 ccaccgataa tagcggcaac agcaagtgtc ataaactatc cttttagatg aaaaacataa
     2161 aggcattata agcattttag ccaaaataaa tataggcaaa cgaaaataaa tgacctatta
     2221 ttttgccagt ttaggaagag attatgatga aaaacagcaa cgaattaaaa acgcttttat
     2281 cagcatttac ggagcaacag cggcaagcat ttcaatccga aaatgtactc agcttacttg
     2341 cacaacgtag ccaattttat gaccaactac tgcaagcact ttggcaagat tttggactcg
     2401 ctcaatatga acatattacc ctattagcgg taggggggta cggacgtgag gagatgtttc
     2461 cgctttcgga tctggatatc ttagtgttaa ctgaaaaacc gctagaagag gctattcagc
     2521 agcgtttaaa cgaactattt gccttgcttt gggacagcaa actgcaactt ggcaccagtg
     2581 tgcgtacgct cgaagaatgt attcagattg ggaaagcaga aatttcggtt gccactaata
     2641 tgttggaagg gcgattttta ttgggtaata aatcgctttg gctaagatta aaagaagcac
     2701 tttatcagcc ggatttctgg gatattaaag cgttttttag agcgaaaatg gcggaaaaaa
     2761 atgagcgtta tgcacgttat cataatacta gctataacct tgagccagat ctcaaacata
     2821 gcccgggagg attgcgagat ctgcatttaa tctcttggat tatgctacgg cattatggtg
     2881 tatcttcttt tgtcgatctc ctcaataaag ggctacttta cccggaagaa tataaggagc
     2941 tgatcgcagc acaagcggta ctttttcgga tgcgttttgc acttcatttg caactgaaac
     3001 gttacgataa tcgccttcgg tttgacagac aattacaact gagtgaaata ttaggctacc
     3061 aaggcgaagc aaatcaagcg gtggaattaa tgatgcgaga ttattttcaa gccacaaaat
     3121 ctatttcgca actgagccaa ttattgttaa acagttttga acaagcctat gtaaacgagt
     3181 tgcaaaaaaa tgcacaaaaa caaccgcttg atcagtattt ttatcggcaa gaacagcaat
     3241 tgtttgtggt cgaacgcaaa atatttaaaa cccaacccac aacaatgttg gatctctttt
     3301 ttcatcttac taatgaccct acgttaatag cgaatgccga caccttacgt cagttgagac
     3361 tgtgtttaca gcaacaacac gagcctatgt gctttttgcc tgaaatgcga gagaaattcg
     3421 tacagctttt tgctcaaccg aaagtcataa gccgagcaat agttccaatg caccaactgg
     3481 gttttttaag tgcttatcta ccgcaatgga aggggatcga agggctaatg caattcgacc
     3541 tattccatat ttatacagtc gatgagcata cggtcagagt catgttaaat ttagaaaatt
     3601 ttagcgaaga tccaagtcgg gcgtttttcc cactatgtca tcagctattt gcaacgcttt
     3661 ctgagaaacc gttgctctat cttgcggctc ttttccacga tattggcaag ggtagagagg
     3721 gcgaacacgc tcaagttggt gcgctggata tgcgagaatt tgcggaacta cacggttttt
     3781 ctcaagcaca aatcaatgat atggtttggc tggtggcaga gcatttgaca atgtcgatca
     3841 ccgcacaaag acgagatatc cacgatccgc aaatcatcag cgaatttgca aaaaaagtgc
     3901 aaaatcagac cgctttatct tcactacttt gtttaacggt tgcagatatt tgtgcaacca
     3961 gtgagagcct ctggaatgat tggaaagcct cgctgtttac ccaattatat caatttacgc
     4021 tacagcaact ggctcaaaat ttgaattatc aagcagtggc acaagagcat cgcttgcaag
     4081 cattagaact gatgaagttc gtgctttcag ctgatgagcg aatagcatta aacgcatttt
     4141 ggcaaccttg cccggagcgt tattttcttc accatacacc gactcagttg gtatggcacg
     4201 ctctgcatta tgtaaaaact cgccggttgc cgatggtttt aatcagtaat gaatatgccc
     4261 gtggtggtac agaaattttt gtatgttgcc aagatcaacc tcaactgttt gctcgaatcg
     4321 cccaattact cagccaaaaa cgcattagca ttcacgatgc acaaattatt actactgaaa
     4381 atggtgtagt gttagacagc tttattgtaa gtgagcgtga tggtgatgat gatttaaccg
     4441 atgagagatg tatgcaaatt cagcaggcga tgatgaaaat gttaagctta actgaaacag
     4501 gcataaaatt taccaaaaaa ccggtgaaac atttgtcatt taagcgtaaa actcggctgc
     4561 gttttcttcc tccgtcatca aagcaacaaa ccgaatttga actttttacc ttggatagag
     4621 aagggttgtt ggcacaaata ggctatattt ttaaccggct ccgattaaat ttaattaatg
     4681 cgaaaattac gactattggt gaaagggtag aggatttctt tgtggtcagt aatgatcaag
     4741 gaaaagcttt atcggaacaa gaacagttag aactaaaagc cattctaatt accgaactag
     4801 atagtgaatg aaaacaaccg cttggagtga agactgcaag cggtaaattt ttcaacgttt
     4861 taggtaaatt aaatcacgag ttaagagagg ttgagaattc aagaaattag aaactaaata
     4921 taagtttcta tcgtttagat taataaatta agacgcaatt tttattaatt accatgatct
     4981 tcaaacgtta aatatgatga ataactaaag gtttgccttg gcattctaac acttcggcat
     5041 caagattaaa cactgttttt aaattttcag tggtgataat ctcttttggg gtgccgatca
     5101 tcttaattcc accatctttc attgcaataa tagtatctgc gtaagcagca gcaatgttga
     5161 tgtcgtgtac caccattata gtagttaagg cgagttcatc ggttaatttt cgtaataatt
     5221 tcattaattc ccgagcatgg aacatatcta aattattcag tggttcatct aataagatat
     5281 gatcggtttg ctgacagaag gtcattgcaa ttaatgcccg ctggcgttgc cctccggata
     5341 attcatttaa gaatcggtgg gagaaagtcg ataaatcaaa tcgtaccaga gcctcttcta
     5401 caatggcatt atcgtgcgaa gtgattctgc cttgatgatg agggtaacgc ccaaataaca
     5461 gcagatcttt gacggtaata cggctatgaa tcacattatc ttgggtcaag atagccagtt
     5521 gtcgagcgat agtttgagaa gctgtgttgg ctatattcag ctcatttaag tggatttcac
     5581 cctgttggat aggttgcaag cgtgcaatta aagagagcag ggtggatttg cccgcaccat
     5641 ttgctccgat taaagcggta ataccaccat ttggaatggt taaattgata ttattcagaa
     5701 tcgtggcatt cccgattttg tggtgaagat ttttaaccgt tatcattttc ttccttaatt
     5761 tatggttatt ttttccgttt taaaatgaga taaataaaga caataccgcc aataaattca
     5821 ataacgacac tcagaacccc ttgcattttc agcacttgct cgaagattgc ctgccctaaa
     5881 attaaggtga tggcagagat taaaaaagtc attggtattc gcacgctatg gcaaacagtc
     5941 gggctaattg cattaacaat ggcacaaaca agtagcccta gaaatagaat cgggccaaca
     6001 agtgcggttg aaacagacac caacaatcca caacagatta gtaattgacg tgaaaattga
     6061 tgatattcta acccaagccc aattgcctta tctttgccaa gtaacaaaat atctaattta
     6121 tgccgttgta accagaccca aatggcagag agaatagcga tacagcctcc aatccaaagt
     6181 aatgtggggg tagtcaggtt aaatgaggca aagaagagcc ttgagcaacg gcaaactctg
     6241 ttgggtcgac attcgttgca acaaattatt taggcttcta aataagacac caaagatgac
     6301 accgattaaa agcattcggg ttaaatcgga tcgatttcga ttcagtgaac taaatagtaa
     6361 tattgatgcc cctagcatta acaaggtttc aaagaaaaac ttatagcttg ggtctaactg
     6421 agtaaagcct aaaccgccaa ataaaaatac taacgaggtt tgcaatagca agtagagcga
     6481 atcgaacccc aaaatacttg gagttaaaat aggattatgt gtgagtgttt ggaatagcag
     6541 ggtcgaaata ccaatcgtat aagcaatagt acagagcaaa ataagctttt tgccacgcag
     6601 ttgcaatata aagtcccaat tacctttcgc attataggtc atataaaaca gaatacttgc
     6661 taataagatt aagcttaaaa cgataaagcg tgatctaacc acgagccttc tcctcagccc
     6721 gtttctcttt gagcaataaa tagaggaaaa tcactgtccc aataatccca aaaatagtag
     6781 aaatcggcac ttcataaggg gcattgatgg ctcgccctaa aatgtcacaa atcaggacta
     6841 aattcgcacc taacaccacg accgcaggca gatttttacg caatcggtca cctgctatgc
     6901 gagagacaat attagggacg accaagccga taaacggaat ctgtccaacc gtcaccacga
     6961 caatagcggt aatcatcgcc accacaatta aggcaagcca agtcatttgt ttgtagttaa
     7021 tgcctaagtt ggtactaata ttttcaccaa ggcctgcaat ggttaattga tctgccatca
     7081 cataaaccac aacagccaga atagcggtaa tccagagcag ttcataccga cctgccaaaa
     7141 taccggagaa gtcgccggaa aaccaaatcg aaagcacttg taggctgtca gtttcataag
     7201 caataaaagt gctgatagct tcaataacat tgccaaaaac gatcccgatt aatgggagca
     7261 ttaattgttg atgaggcggt aattgacgaa tgagcaacat aaaaagcccc attcccatta
     7321 atgcacttaa tgtggcaata gacattttta acagtaatgc tgatgttggg aaaagtaaac
     7381 tagcaagtaa aataccaatt gccgcacttt ggctagtgcc aatcatacta ggctcaataa
     7441 agcggttctt cagcacaatt tgtaatacca tacctgcaac ggctaaggtt gcaccgacta
     7501 atatcactgc gagcgttctt ggtaaacggc tgataaaaaa gatctgactt tgttcggaag
     7561 aatgaaaaat ttcactccaa tgaaaatctg ccacacccac actggcactg attggaatga
     7621 gcaatattaa aagaaataga tttaatctaa aaaaagagaa catagtgata aatagcaagc
     7681 ggtcatattc tctctctttt ttacaaatgc aggcacttgc aaaaatagga ggaaatctga
     7741 ccgcttgtaa ggttaattat tttttctcaa atgctgtttt aatgttagtt aggtcggttt
     7801 tcatctgctc ataaccaccc ggcgctaaat atgaggcagc acttagataa acgatattac
     7861 cgtttttcca agctttagtt tgacgaacta attcattatc caacacttgt tgggctgatt
     7921 gaccttcttg tccgatagcc gcaatacggt ctaacacaaa caaccaatcc ggattgagtt
     7981 tttggataaa ttcaaacgaa acaggctgac cgtgaccggt atttttaatg ctagaatctg
     8041 ccattggaat ccctaaatta tcgtgaatcc aacttaaacg ataacctgaa ccaaatgcag
     8101 aaattttgcc accattgact aaaataatca gtccgttacc tttacctttt actgctgctt
     8161 tggtttggtc taataaagta ttaatttctg cttttagttt ttcggtttcc gcttctttat
     8221 taaataattt gccgaaagaa tcaagacgct gtaatccgct ttcgattaat ttatcgccat
     8281 tatccgtcat gtcgatggtt ttcgcaattt ggctgacttc atcaaatttt tttgctgtgc
     8341 gtgtgccaac aatgatcaaa tccggattta aagaatttaa cgcttctaaa tccggctcaa
     8401 ataccgtacc gacattcacc gctttgtctg cactcggttt aagataagaa agcaccttaa
     8461 attcaggcat accgtcaatt tttacaccta aggcttgtaa agtatccaaa cttccggtgt
     8521 caaacacggc aattttagac ggggtttctt tgaaagtaac ctctccacgt gcagttggaa
     8581 tagtaacatc tttggcaaat gcagaagcag caaacacagc agttgcggtc aatgcaaaca
     8641 aggctttttt aatcattgga taactccatt tatattgaaa ataattctca aagattttaa
     8701 cgaaaattga ttttaagtaa agcggaaaat aacaagcggg cgaattttgc ctaaaatttg
     8761 caaatttcaa tttaattaaa attccgatac actatgtaca tcaatacgtc attatagcaa
     8821 gagaaaaata tggcagaata tagcggaaca acccaagaga agatgaaaga taagcaggtt
     8881 gagcaaatta atatctcacc acattcgatt gaggcagagc aagcggtgct tggtggcatt
     8941 atgctcagta atgatcactg ggataatgtt gctgagcgtg tacaaccgca cgatttttac
     9001 aactatgcgc atcgaattat ttttgaacaa atggcggagt tggtgcgcca caataaaccg
     9061 attgatatta ttacgctgga tcaagcctta aaagacaaag gggtgctgca agatgtagga
     9121 ggttttgcct atttagccga gctttctaaa aataccccga gtgcagcaaa tattttagcc
     9181 tatgcggata ttgtgcgaga tcgttccgat ttaagaagtg taatcagtgc cggcaatcaa
     9241 attgcggaaa tgggctacaa aacgaaaggg cgtaactcca aagaagtgtt agacgaggca
     9301 gagcgaattg tgtttgaaat tgcagaaaaa cgcaataacg ccaatgaagg tccacaacgt
     9361 attgacgata ttttgcttaa aacactcgct cgaatggata cgctatctaa aaatcgccat
     9421 aacggcggag ttactggtgt ttctaccggg tttgttgatc tcaataaaaa aaccgcaggg
     9481 ttacagcctt cggatttaat cattgtggca gcccgtcctt caatggggaa aactactttt
     9541 gcaatgaact tatgtgaaaa tgcctcatta gtggatattg aagataaaga tgatttagac
     9601 gaacagggta atccgaagaa aaaaccggca aagccagtgc taattttcag cctggagatg
     9661 ccggcagacc aaattatgat gcgtatgctt gcctcacttt ctcgggtcga tcaaaccaag
     9721 atccgaaccg gtcagatttc agatgatgaa gacactgcta aaatctccag cacaatggca
     9781 attttacaag aacgtaataa tatctatatt gatgatagct ccggtttaac accgaccgaa
     9841 ttacgttctc gagcgagacg gatttatcgt gaaaatggcg gattaagctt gattatggtg
     9901 gactatctcc aattaatgcg agcgccggga tttgcagata atcgtacttt agaaatcgca
     9961 gaaatttccc gttctttaaa ggcactagcg aaagaattag aagtgccagt agtcgctctt
    10021 tctcagctaa accggagttt ggaacaacgt gccgataaac gtccggtaaa ctcggatttg
    10081 cgtgagtcag gttctattga gcaagatgca gacttaatta tgtttattta tcgtgatgag
    10141 gtctataacg acaattccga tctgaaaggc attgcggaaa ttattatcgg aaaacaacgt
    10201 aacggcccga ttggtcgggt gcgtttaacg ttccaagggc agtattcccg ttttgataat
    10261 tacacaggag ggcattatga tgatgaatac taaaccaacc cagccaatca cactttgtgc
    10321 gatttatcgc agtaaggcaa aagaaggaat gtatttatat gtgcctaagc gtgaccaatt
    10381 tgagcaagtg ccggaaacat tacgccagtt atttggtaag cctgaatttg tgatgatgtt
    10441 taatttaacc ggtgaaaagc cattggtgcg tgctaaaaac gaagaagtgt tacaattact
    10501 tatagagcaa ggctactatt tgcaaatgcc acctccgccg gagaatttgc ataaagcctt
    10561 tatcgcacaa cagaaagggg aaaaataatg cgctgcccat tttgttccac tgaagaaact
    10621 aaagtgatcg attcacggct tgcagcaagc ggttatcaaa ttcgccgccg ccgtgaatgt
    10681 ataagctgta aagaacgttt tactaccttt gaatcggccg aattagttgt gccttatgtg
    10741 atcaaaaata atggtagccg agagccgttt gatgccgaaa aattaagaac agggttaaga
    10801 cgtgcattaa ataaacgccc tgtcagtgct gatgatgtcg aaaaagcaat tagccaaatc
    10861 attattcagc tgcaagcgat gggcgaacga gaagtgccga gtcgccatat cggtacattg
    10921 gcaatgaacg cacttaaaca attagacaaa gtagcatata tccgctttgc ctctatttat
    10981 ttaagcttta gtgatattga agagttcatt aaagaaattg aaaaattaaa agagtagttg
    11041 caaaaaaaca taaaaaaatg accgcttgtg agtttaaaat ccacaagcgg tcatttttct
    11101 ttaaaaatac tcaattagct tttacttgtt ccaacacaaa ccctacaaac gcccgcacaa
    11161 tgctagacgg ataacgatgg gcggcataaa tcatcgtcaa atcaaatttg gggttttctg
    11221 tctcacccaa gacttccacc aagccatttt ctgccaccaa tctatccacc gtgctgtcgg
    11281 caagcagagc cactgctttt tgccatatat tcaatggcat agctgtcatt gctggaaaaa
    11341 agatagggaa tttctaccgc ttgtctgcca gtgcctagcg tgatgacgct tgcttcattt
    11401 tttgcccaag cggcaatggg gaaatttttc aaatctttga cggtgctggg cgtgccaaag
    11461 cgtgccaaaa atttagggtg tgccacccat ttactgccga tttgccccac ttttttggcg
    11521 ataaactgtt cgccgtgtag ttgcccaatc cgaaacgcca catcaatgcc atctgccgac
    11581 aaatccaaaa gacggtcggt cagcgtgcaa tgcacttgta cttgtggata agctgcctga
    11641 aaatcagcta tccacgccaa aacaggctcg caggcagggc ttgccgacag gcgtaattta
    11701 ccctttaaat tgccttgctc ttcaaacaac acttctttgg cagtggcaag ctgttcaatg
    11761 gacaaatgca cctgttcata caggcgttgc cctgccattg tgggtttaac gcctgatttt
    11821 tggcggtcaa agagttgaat gttaagctct ttttccaaat cggcaatttg acggctaatg
    11881 gttgcaatcg gcacattgag tcgctcggag gctttggaga gactgccgtg ctggataacg
    11941 gcgacaaaga ggcggagggt gttgaggttc attgtttttc tccccaatgt tcaatttctt
    12001 gaataaaatg tttaatactg ccttggactt gttgattttt accatataga taataaacgc
    12061 ctgaaagttc ttgtaaaaat ttactttctt tataagcgtg tttttcaccc aacacagtcc
    12121 aaactaactt taacttatgc tcttttaaaa aatccaaaaa tttgtctttt ttaaccagta
    12181 agctattttg aaatttttca tttatctctg gattaaagca aaccaaatta ttttgtaaat
    12241 caacccaata accatcttta atcgcatttt tcattttcat tccgtgataa agcataggaa
    12301 ttggcgcata aaatgaaatg ccgtcattgc cataagtaga ttcccaagtg tgagaatcga
    12361 cactaggtat taccttaaat gaaggcgatt tattttccct atgtcgataa atttcttgcc
    12421 actcatttaa tgtattttcg gcaaaaaatt gatgaatatt cattccatag tgttcattac
    12481 cttctggcat ccatctttcc ataaaatctt gttgtgccaa ccaatttttt gcttttgaaa
    12541 attgagattc tttaactaaa taacttctaa tttgtaacca catttgccta tcataagttt
    12601 ctttttgccc aaattttgct aattcacgaa aatcatcgtg tctttctaga acaagccact
    12661 gttcatcatt aatcgttact tccaaaagat tactaacatc aggaaaatca tttattttta
    12721 cccaatcatc aattaattca tcattttgaa tggtaaaata gtgttttgtt ttacattgtt
    12781 tttgatttat gtattgaaaa aatacatctg ttttagttgg cggtacaatt ttaatttggg
    12841 ttttgggtag ataaaagttg tccaaattag taatatattc aagccctatt tcatcggcat
    12901 agcgattaga aaaagtagga aaattatcca tcacccttgc caagatttca tacaaagcca
    12961 accattgata tttcttgcca attcgctcaa ttttattagt atcatctctt cgccaatatc
    13021 ttgaacgagt ttctttatca aactcaaggt gcttcttgtc atcatagcca aattgctcaa
    13081 aaatcatttg gcaagcataa ttacttaata aatcaacatt gatgagattg ccgaatttat
    13141 aactctccca atttcggaat ttggcttcaa aagtatatct gccaaaatca ccatatccac
    13201 acataccacg accatattca gttgtcattg aacggataat gattctttgt ccatcagaat
    13261 gatatttttt atcaatttct tcattggttg gtaagttttg gggaaatgaa cttctataag
    13321 gtggcgtaat tctttctctg attatctcaa tatcatctga tgaatattca tctttttgca
    13381 aagagtattc aataatatgg cgagcataat cacgaaccaa aacattggga taaatttctt
    13441 ctgtttcagg ttgattaaat atttgattat ctatctctaa tgcaagtgct tttaagccag
    13501 atgaattttc agaataagca acagctccgt gaatggcaga taaaatacct tccataacat
    13561 aagggtcatt aacctctata aattccttga ataacgccaa tgcaatttcc aatctattcc
    13621 ataataaatg agccagtgca ttaatatagc catttctact tcgtttatcg gtagaagtaa
    13681 atagccaact aacagcaatt gcacccaata atagtgcttc gggttcaata ttttcttgac
    13741 cacttgattt ctgacaccaa gttagtaatc gttcaattgc tgggcattga tcagactcca
    13801 aagcaataaa agctgtccaa atctcatctc tatct
//
LOCUS       DANLZQ010000073        13809 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.073, whole genome shotgun sequence.
ACCESSION   DANLZQ010000073 DANLZQ010000000
VERSION     DANLZQ010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13809)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13809)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13809
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.073"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(<1..694)
                     /locus_tag="PXE50_001799"
     CDS             complement(<1..694)
                     /locus_tag="PXE50_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 52 protein"
                     /protein_id="HDL5622693.1"
                     /translation="MNLIICCTPLQVLIAEKIIEMHPNERFYGVMLSTVKNAKFDFYQ
                     ARLAQKCEQFFAMQQHSERIQLLKEIIYLKRTFGGKKFNKVFLANINELEIQFLLSAI
                     SFQELNTFDDGTANIVQNSIFYQAENIGLNRKLINFFLGNKYSLEKLKQRSKTHYTIY
                     KNFPNIIENTVYIDLINQVESVGTAPSNDDITHILLGQPIFERDDEKNIALAEKVIQQ
                     FGIDLYLPHPREK"
     gene            complement(691..1896)
                     /locus_tag="PXE50_001800"
     CDS             complement(691..1896)
                     /locus_tag="PXE50_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flippase"
                     /protein_id="HDL5622694.1"
                     /translation="MKAVKDSVIYLIGELASKSIPFLLLPYFSRKLGVAGYGELSYYQ
                     TFAALFVIFIGLSQDGAVARYFYFYGKRSLNLVLSTGYLYTLCATLLILLGCWYFQSE
                     IIAYVAIGAMFQSFLNVQLSVRQCQKQALAYTTIQLMSAIFSAVITVAMMEYFKTDLV
                     EKRILAILMSNGLVFLIAYFLYAKRAKTKKFSLARHKTALLYLFGFGIPLILHHSSIF
                     LKGQLDRVFIYHKFSEEDLGLYAMGAQIAMILAIVVQALNKATLPYFYEALKQKKINV
                     SHIHKWALYALFIVPLPAIVMWFIPEELVVWILGSQFVGTKYYIILFLIATMLVVPYL
                     ILVNYLFFYGKNKLISLCSILSTIFYLVALFALTFSKIEYIPFASIIGAISIIPILYI
                     MTAKVGKTV"
     gene            complement(1906..3090)
                     /gene="neuC"
                     /locus_tag="PXE50_001801"
     CDS             complement(1906..3090)
                     /gene="neuC"
                     /locus_tag="PXE50_001801"
                     /EC_number="3.2.1.183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (hydrolyzing)"
                     /protein_id="HDL5622695.1"
                     /translation="MKNIAYITGSRAEYGIVKRLLQKLAQDPTVNFSLVVTAMHLDPQ
                     YGNTVTVIEQDGFEIAARIPLTLNSENNQTIIHSMAECLDRFGEHFQQHRYDAVIVLG
                     DRYEMLAVATAAAMHNIPLIHLHGGEQTLGNYDEFIRHCITKMSKLHLTSTEEYRQRV
                     IQMGELPENVVNTGSLGAENSLDLVLPTQAELVERLGIPASPYFLVVFHPETLTDVSV
                     LEQIEALLNAFEQFKDKYQFVFIGSNSDTNSEQIYARFKAYTDENQFKFFTSVKPEEY
                     LALIKYSNGLIGNSSSGLIEAPSCGVGTLNIGNRQQGRVRDESVIDVESNEQAIIDGI
                     EKLISADFQHRLPSMKNPYFQDNAMEKAYNAIKIFLADSHHTQPKGFYDVAFSQAVKK
                     SE"
     gene            complement(3091..4350)
                     /locus_tag="PXE50_001802"
     CDS             complement(3091..4350)
                     /locus_tag="PXE50_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylneuraminate cytidylyltransferase"
                     /protein_id="HDL5622696.1"
                     /translation="MKKIAIITARAGSKGLPNKNVLLANGKPLMAYSIEAAIESGQFE
                     KIIVSTDSQEYIDLFSHYPIEFIKRAEHLASDKASSFVVIEDVLNQYRSVEFDYFMLL
                     QPTSPLRSGEHIKESCEKFEKNFEQFDFLVSVSDAHKPTTLTRMIEEDECLKHFQLDY
                     SNYARQLHHPEYSPNGAIFTAKPEAYLKQKHFYGAKCLAYFMDKDVSIDIDDRQDFEY
                     FYFILQQRNKEKILLETIKRSILMKKENFKEVKEIALIGHSIIEYWDIEHLNGKAVNN
                     LGIAGISTKQYSDLILDEGLISALPKDIILMFGTNDIVYAGWSDEKILADINHLIAQL
                     TAIRGDINLYFLEITPTAFRVDRNNNDIRLLNQYLKDNLAVKWISLDQAFSDKYGKLD
                     LSYSDDGLHLNAKGYEKLTAILEKELN"
     gene            complement(4410..5447)
                     /gene="neuB"
                     /locus_tag="PXE50_001803"
     CDS             complement(4410..5447)
                     /gene="neuB"
                     /locus_tag="PXE50_001803"
                     /EC_number="2.5.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate synthase"
                     /protein_id="HDL5622697.1"
                     /translation="MVNVFIVAEIGCNHNGDPALAKKMVDVAKECGVDAVKFQTFKAD
                     KLISKYAPKAEYQKVTTGTADSQLEMTRKLELPYEEFVKLEAYARSLGLEVFSTPFDF
                     ESIDFLASQQQKVWKIPSGELTNLPYLEKIARLPIEGKTIVISTGMATIEETKASLKV
                     LEDNGVAKKDITILHCNTEYPTPYEDVNLNAFHQLKQEFGDYSLGFSDHSAGYFAGLA
                     AVPYGITFIEKHFTLDKNFEGPDHKASVTPEELKLLCEGIRAVEKSLGSSEKLVTNSE
                     AKNKIVARKSIIAARPIKKGEIFTTENITTKRPGNGISPMFWYDVLGKEAQQDFEEDQ
                     LIQDSRFENQM"
     gene            complement(5447..6091)
                     /locus_tag="PXE50_001804"
     CDS             complement(5447..6091)
                     /locus_tag="PXE50_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HDL5622698.1"
                     /translation="MQQKSKREKLILIGAGGYAKSVLDSLDHEQYEFCGLIDNFKPEG
                     SVHLGYPILASTIDCFSKRDNYHYFICIGNNSYRLEKFSKLQKYKCRIINVVDKTALV
                     SKNSTLGIGVFVGKMAIVNSGVTVGDNVIINTKSLVEHGCFIGSHCNISTNTTLNGDV
                     IVEDHAFIGSSSVVNGQLRVGESALVGSGAVVIRNVEPRTVVAGVPAKYIKDIK"
     gene            6224..6967
                     /locus_tag="PXE50_001805"
     CDS             6224..6967
                     /locus_tag="PXE50_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005615381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HDL5622699.1"
                     /translation="MFEFIKLITAMILPPFNIILLWLLALILFSLGYKYAAYFFALLG
                     ILILYIFSIPYTSQKLGDSLVEAEPFTIEKYKNAQAIVVLGGGLRDSQELFGKLAITG
                     IPLERMRYAAYLHKETGLPILATGSSPNGTSEAKVMADEFKMFFNIETKWLENKAKTT
                     KENAIFSREILEKENIHKIILVTNQWHMKRAEMLFSQQGFEVMSASVGSGDTPDHYKL
                     NFMHFIPQAGAMNSNMLALKEWIGYWKEK"
     gene            complement(7044..9242)
                     /gene="priA"
                     /locus_tag="PXE50_001806"
     CDS             complement(7044..9242)
                     /gene="priA"
                     /locus_tag="PXE50_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HDL5622700.1"
                     /translation="MALNVPLHRYFDYLLPPAFNACQGGRVVVPFGRQTKIGIVVDFP
                     QTSDVPTEKLKPIKAALDSSPIFDSEMWQLLNWAARYYHAPIGEVLTGALPIKLRNGD
                     STERVQPNYFVVTEQGRKSLIIGENKKAKKQVERLTELAECAKYFEKPTACSPSAWKG
                     LLEKGYIEKIDVPFMAQAWQDSLGEFPLVNTNNRLILNKQQTLVVSRLNAQTTFASFL
                     LNGVTGSGKTEVYLQLIETVLKREEQVLLLVPEIGLTPQTVQRFKARFNVEIDVLHSN
                     MNETERLNAWLRAKNGESAIVIGTRSALFTQFQKLGVIILDEEHDSSFKQQDGWRYHA
                     RDLAVVRAKNANIPIVLGSATPSLESLHNVQNGKFIELTLTARAGNAQLANQQIIDLK
                     TQRVTAGLSERLLSMMKTQLEQGNQVMLFLNRRGFAPVLLCHECGWVCECEACNKPFT
                     YHQKQKVLRCHHCATQRVIPRQCGHCGSTHLITTGVGTEQLEQVLNQQFPHYQVTRID
                     RDSTARKGALENHLTAIREGKSQILIGTQMLAKGHHFPNVTLVAIVNVDSALFSTDFR
                     AEEKLAQLYIQVAGRAGRAEKKGEVVLQTHYPDHPLLKTLLEQGYRAFADEALKMRQL
                     MSLPPFSSQVLFKATGKDNQQTLQLLEQLADYFSQKIQQQNGQGFQLPPPFSAPMAKK
                     AGHYRWLLLIQHPLRGALQQLLDAFDQERESLNIPNNIRLNIDIDPQEIS"
     gene            complement(9254..9866)
                     /locus_tag="PXE50_001807"
                     /pseudo
     CDS             complement(9254..9866)
                     /locus_tag="PXE50_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005818858.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
     gene            complement(9859..10758)
                     /gene="rarD"
                     /locus_tag="PXE50_001808"
     CDS             complement(9859..10758)
                     /gene="rarD"
                     /locus_tag="PXE50_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HDL5622701.1"
                     /translation="MLKGILLSLSASVLFGCMYYLAIFLKPLAGVSIFGIRMLVTIPF
                     LFLALYLFKKQNEFWVFLQRLKQEPYLLLVILITASIVGGQMWLFLWAPNSGKAIEVS
                     MGYLLMPIIMVAFGKVVYKETLSLNKWLAIVVAFIGVASNILFTGKISIASLFVCTGY
                     PIYFYLRRKFGLSHLHSFVVEILYLLPVACYFISQTDMQYVETQNLNIYYFIALLGLI
                     SGTALISYTLASTILPFNLLGLLGYVEPLLMLVVSFLIGERLANESYLLMICLLISIS
                     FLVLDGMFALRQQRKRKLSVNNE"
     gene            complement(10985..12202)
                     /locus_tag="PXE50_001809"
     CDS             complement(10985..12202)
                     /locus_tag="PXE50_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HDL5622702.1"
                     /translation="MDRFPKSDKLAQVRYDIRGPIHKEALRLEEEGHKILKLNIGNPA
                     PFGFEAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIVQYYQSKGMRGMDVNDVYIGN
                     GVSELITMSMQALLNDGDEILIPMPDYPLWTAASTLAGGKAVHYLCDEENEWFPDLED
                     IKSKITPRTKGILVINPNNPTGAVYSRQILLEIAELARQHNLIIFADEIYEKIVYDGA
                     VHHHIAALAPDVLTVTYNGLSKAYRVAGFRQGWMVLSGPKHQAKGFIEGLDMLSSMRL
                     CANTPMQHAIQTALGGYQSINEFVLPGGRLLEQRNKMHELLVQIPGISCVKAKGALYM
                     FPKIDTEMYGIKDDQKFIYDLLRQEKVLLVQGSGFNWKKPDHFRVVTLPYAHQIEEAI
                     GRLANFLKTYRQD"
     gene            12390..13694
                     /locus_tag="PXE50_001810"
     CDS             12390..13694
                     /locus_tag="PXE50_001810"
                     /EC_number="5.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase"
                     /protein_id="HDL5622703.1"
                     /translation="MLIFHQLKQELTKSYSKVGREQGLVAIQASMPLLEANIPLLGWL
                     KTQKTSYPHFFLQYRDTDQTIATIGTLRQFYTLEAAQSFIQQHHFPLIGGLQFEGNTQ
                     FILPQFSLVKNQQNLTACFYFDSDNFEQQAVIFEQFLANFSQITELGLTDNPLVSMSA
                     TSHFEQWKANIEKAIVSIEQGDFQKVVLANAMRLHFEQPICAYSLLAQSQKTNLGCYH
                     FLWAESADVAFLGSTPERLYQRQGLHFSTEALAGTAAVTTSEVQTELNAQWLLSDPKN
                     IYENQLVVDDIENQLKDCVTEFAVSEAKIKRLHNVQHLRRQIQATLKPDTSDSDCLSK
                     IHPTAAVAGLPRQKAKGFITENEPFTRHWYAGTLGVMGNEEAEFCVTLRSALISQNSI
                     TLYAGAGIVSGSDPQSEWQEIKRKAQGMAKLLDVDLVTKGEL"
BASE COUNT         4275 a         2918 c         2499 g         4117 t
ORIGIN      
        1 atttttctct tggatgcggt aaatatagat caatgccaaa ttgttggata actttttccg
       61 ccaatgctat atttttttca tcatctcgtt caaaaatagg ctgtcctaat aaaatatggg
      121 taatatcatc gttagatggt gctgtaccca ctgattcaac ctgattaatg agatcaatat
      181 aaaccgtatt ttcaataata ttcggaaaat ttttgtaaat tgtataatga gttttagagc
      241 gttgtttcag cttttctagg ctatatttat tacctaaaaa aaagttaatc aattttcgat
      301 ttaacccaat attttcagct tgatagaaaa tactgttttg tacaatatta gctgtgccat
      361 catcaaaggt attgagttct tgaaatgaaa tggcacttaa cagaaattga atttctaact
      421 cattgatatt tgctaaaaag actttattaa acttcttacc gccaaaagta cgttttaaat
      481 aaataatttc ttttaataat tgaatacgct cgctatgttg ttgcatcgca aaaaattgtt
      541 cgcacttttg ggctaatcta gcttggtaaa aatcaaattt cgcgtttttt accgtagaaa
      601 gcatcacccc atagaatcgc tcattagggt gcatttcaat gattttttca gcaatcaaca
      661 cttgcaaggg cgtgcaacaa ataattaaat tcatacggtt tttcctactt ttgccgtcat
      721 tatataaaga atcggaataa tgctgattgc accaatgatg ctggcaaaag gaatatattc
      781 aattttagaa aaagttaaag caaatagtgc aactaaataa aaaatagtag ataaaatcga
      841 gcaaagcgaa attagcttat ttttgccata aaaaaacaaa taattgacta aaatgaggta
      901 aggcacaacc aacattgtcg caattaaaaa gagaataatg tagtattttg ttcctacaaa
      961 ttggctaccc agaatccata ccactaattc ttccggaata aaccacatca caatagcagg
     1021 taatggtaca ataaataagg catacaacgc ccatttgtgg atatggctga cattaatttt
     1081 tttctgcttt aaggcttcat aaaaataagg cagtgttgct ttatttaagg cttgaaccac
     1141 aatggctaga atcatcgcaa tttgagcccc cattgcatat aaacctaaat cctcttcgct
     1201 aaatttatgg taaataaata ctctgtctaa ctgtcctttt aagaaaatac tggaatggtg
     1261 caaaatcaac ggaataccaa agccgaataa atacaataaa gcagttttat ggcgggcaag
     1321 gctaaatttc ttcgtttttg ctcttttagc atacaaaaag taagcgatta gaaagactaa
     1381 gccattactc atcaaaatcg ctaaaatccg cttttccact aaatcggtct taaaatactc
     1441 catcattgca acggtaataa ctgccgaaaa aatcgccgac attaattgaa tcgttgtata
     1501 agcaagtgcc tgtttttgac actgccttac actaagctgt acattcaaaa acgactggaa
     1561 catcgcccca atcgctacat aagcaataat ttcagactgg aaataccagc aacccaacag
     1621 gataagcaaa gttgcacaaa gagtatataa ataccctgta ctcaagacta aatttagtga
     1681 acgcttacca taaaaataga aatagcgagc aaccgcaccg tcttggctaa gcccgataaa
     1741 aattacaaat aaagcagcaa aggtttggta gtaggaaagc tccccataac ctgccacgcc
     1801 gagtttgcgt gaaaagtagg gtaagagcaa gaaaggaatt gactttgacg ccaattcccc
     1861 aattaaataa atcacactgt ctttaactgc tttcatagtt gcaaattatt ctgatttttt
     1921 gaccgcttgc gagaaagcaa catcataaaa tcctttcggt tgagtatggt ggctgtctgc
     1981 taagaatatt ttgattgcat tgtaagcctt ttccatcgcg ttgtcttgaa aatatggatt
     2041 tttcatactc ggtaaacggt gttggaaatc ggctgaaatc aatttttcga taccatctat
     2101 gatagcctgt tcattactct ctacatcaat tacgctctca tcccgtactc gcccttgctg
     2161 gcgattaccg atatttagcg taccaacacc acaactcggt gcttcaatca agcctgatga
     2221 gctattacca atcaacccat ttgaatattt aatcaacgct aaatactctt ccggtttgac
     2281 tgaggtgaaa aacttaaatt gattttcatc ggtgtaagcc ttaaaacgtg cataaatttg
     2341 ctctgaattg gtgtctgaat ttgagccgat aaagacgaat tggtatttgt ctttaaactg
     2401 ctcaaaagca ttgagtaacg cctcaatttg ctccaacacg gaaacatcgg ttaaggtttc
     2461 cgggtggaag accactaaaa aataaggcga tgccggaatc cctaatctct cgactaattc
     2521 tgcttgggtc ggcaacacta aatccaaact attctccgcc cctagagaac cagtattcac
     2581 cacattttcg ggcagctcgc ccatttgaat cacacgctgt ctatattctt cagttgaagt
     2641 taaatgcaat ttcgacattt tggtaataca atggcgaata aattcatcgt aattacctaa
     2701 tgtttgctca ccaccgtgca gatgaatcag cggaatatta tgcatcgccg cagccgttgc
     2761 caccgccaac atctcgtaac gatcgcctag cacaatcacc gcatcataac gatgttgctg
     2821 gaaatgttcg ccaaatcgat ctaaacactc tgccattgaa tgaataatgg tctgattatt
     2881 ttcactgttt aaggtaagcg gaatacgagc tgcaatctca aagccatctt gctcaatgac
     2941 cgtcaccgta ttgccatatt gcggatccaa atgcatcgca gtaacaacca gagagaaatt
     3001 cacagtcgga tcttgtgcta atttttgtaa taaacgcttt acaatcccgt attcggcacg
     3061 agatccggta atataggcaa tatttttcat ttagttgagc tctttttcca aaatagcggt
     3121 taatttttca taaccttttg catttaaatg taatccgtca tcgctatagc ttaaatccaa
     3181 tttgccatat ttatcgctaa atgcctgatc taagctaatc catttcaccg ctaaattatc
     3241 tttaagatat tgatttaaca agcgaatatc gttgttatta cgatcgactc taaatgcagt
     3301 tggggtaatt tccaagaaat agagattaat atctccacga attgctgtta attgtgcaat
     3361 taaatgatta atatctgcta gaattttttc atcactccag ccagcatata caatatcatt
     3421 agtaccgaac attaaaataa tgtctttagg taaagcagaa attaaacctt catccaaaat
     3481 cagatcactg tattgttttg ttgaaatacc tgcaattcct aaattattaa ctgccttacc
     3541 gtttaaatgt tcaatatccc aatattcaat gatcgaatgc ccgattaagg ctatctcttt
     3601 cacttcttta aagttctctt ttttcattaa aatcgaacgt ttaatggttt caagtaagat
     3661 tttttcttta ttgcgttgtt gcagaataaa gtagaagtac tcgaaatctt ggcgatcatc
     3721 aatatcaata gaaacgtctt tatccataaa ataggctaga catttcgcac catagaagtg
     3781 tttttgttta agataggctt ctggcttagc tgtaaaaata gctccattcg gtgaatattc
     3841 aggatgatgc aattggcgtg catagttaga ataatccaac tgaaaatgct ttaggcactc
     3901 gtcttcctca atcatacgag tcaatgtcgt aggtttatgg gcatcagaaa cagatactaa
     3961 gaaatcaaat tgttcgaaat ttttctcaaa tttttcacac gattccttaa tatgctctcc
     4021 tgatctcaac ggcgaagttg gttgaagtag cataaaatag tcaaactcta ctgatctata
     4081 ttgatttaac acatcttcaa tcacgacaaa agaactcgcc ttatcactgg ctaaatgctc
     4141 ggcacgttta ataaattcaa ttggataatg tgagaacaaa tcaatgtatt cttgggaatc
     4201 agtactaacg ataattttct caaattgccc cgactcaatc gcagcttcaa tagaataggc
     4261 cattaacggc ttaccgttgg ctaataatac atttttattc ggcaagcctt ttgaaccggc
     4321 tcgggctgta ataattgcaa tttttttcat aaatttgacc gcttgttaaa cacaaaatga
     4381 tggagctttc atcccatcac tatattatat tacatctgat tttcaaaacg agaatcttga
     4441 attaattgat cttcttcaaa atcctgttgt gcttctttac ctagcacatc ataccaaaac
     4501 atcgggctaa tgccattacc ggggcgttta gtcgtaatat tttcggttgt aaaaatttcg
     4561 ccttttttaa ttggacgtgc cgcaataatt gattttcttg ccacaatttt attttttgct
     4621 tccgaattag tgactaattt ctcggaagaa cccagcgatt tttccaccgc acgaatgcct
     4681 tcacacagta atttcagctc ttcaggtgta accgaagctt tatgatccgg accttcaaag
     4741 tttttatcta aggtaaaatg tttttcaatg aaggtaatgc cgtaaggtac tgccgccaac
     4801 cctgcaaaat aaccggcaga gtggtcagaa aaacctaaac tatagtcgcc aaactcctgt
     4861 tttagctgat ggaacgcatt taaattcaca tcttcataag gtgtcgggta ctcggtatta
     4921 caatgtaaaa tcgtaatatc ttttttcgct acaccgttat cttccaatac ttttaatgag
     4981 gcttttgttt cttcaatggt tgccataccg gtagaaataa cgatcgtctt gccttcaatc
     5041 ggaagtcgtg caattttttc taaatacggc aaattggtta attcaccaga cggaattttc
     5101 cacacttttt gttgttggct tgccaagaaa tcaatcgact cgaaatcgaa tggcgtagag
     5161 aatacctcta accccaatga acgagcgtaa gcctctaatt tcacaaactc ctcataaggt
     5221 aactctaatt tgcgggtcat ttctaattgg gaatcagcgg tgccggtcgt tactttttga
     5281 tactcggctt taggggcata tttagagatc aacttatccg ctttaaaggt ttggaatttc
     5341 accgcatcga caccacactc tttcgctaca tcaaccattt tctttgctaa cgcaggatcg
     5401 ccgttatggt tacaaccgat ttctgccaca ataaatacat ttaccattat tttatatcct
     5461 taatatattt tgctggaacg cctgctacaa ctgtgcgagg ctccacattt ctaattacca
     5521 ctgcaccgga gccaaccaat gcactttcac ccactcttag ctgtccgttc acaacagagg
     5581 aactaccaat aaaagcatga tcttcgacaa ttacatcgcc atttagtgtc gtattggttg
     5641 aaatattgca atgactgccg ataaaacaac catgctcaac cagcgattta gtgttaatga
     5701 tcacattatc gcctacagtt acgccactgt ttacaattgc catttttcca acaaacactc
     5761 caatgcctag agtggaattt ttggacacca atgcggtttt atctaccaca ttaattattc
     5821 tacacttata tttttgtagc ttagagaatt tttctaaacg gtaactatta tttccaatac
     5881 aaataaaata gtgataatta tctcgtttag aaaaacaatc aattgttgaa gctagaatag
     5941 gataacctaa gtgcacacta ccttcaggct taaagttatc gataagtcca caaaattcat
     6001 attgttcgtg atcaagtgaa tctaacactg atttggcata gccaccggca ccgatcaaaa
     6061 tcaatttttc tcttttagac ttttgttgca ttgctatcac ccatgatgaa tttcaattca
     6121 tatggagtat tctaatactt ttcaagatag aaaaatagac aagtcttata taatttagga
     6181 aaatgaacat atctttactt atttttacta cgatattctt tctatgttcg agttcattaa
     6241 actgatcacc gcaatgatcc tcccgccatt taatattatt ttgctgtggt tgttagcatt
     6301 aatcctcttt tctttaggct ataaatacgc tgcttacttc tttgccttgt taggtattct
     6361 gattttatat atcttcagca ttccctatac ttcacagaaa ttaggggatt cattagtcga
     6421 agcagagcca tttaccatag agaaatataa aaatgctcaa gcgattgtgg tgctaggtgg
     6481 cgggctacga gacagccaag agttattcgg caaactggca attaccggta ttccgctgga
     6541 aagaatgcgt tatgccgctt atctgcataa agaaaccggc ttaccgattt tagcgaccgg
     6601 aagcagccca aatgggactt ctgaggcaaa ggttatggca gatgaattta aaatgttctt
     6661 caatattgag accaaatggc tggaaaataa ggcgaaaacc accaaagaaa atgcgatttt
     6721 cagccgtgag attttagaaa aagagaatat tcataaaatc attcttgtta ccaaccaatg
     6781 gcatatgaaa cgggctgaaa tgctgtttag ccaacaagga tttgaggtga tgtctgccag
     6841 cgtcggttct ggcgatacgc ccgatcatta caaactcaac tttatgcact ttattccgca
     6901 agccggtgca atgaatagca atatgctggc attaaaagag tggattggtt attggaaaga
     6961 gaaataaccg aagataaata gcagcaaggc aggttttcac ctgccttctt tttgcaaaaa
     7021 atcagtcaaa aacaaccgct tgtctaacta atctcttgtg ggtcaatgtc gatattcagc
     7081 ctgatattat tcggaatgtt taaactttcc ctttcttgat caaaggcatc gagtagctgt
     7141 tgtaatgctc ctcggagagg gtgttgaatc agcaataacc agcggtaatg tcctgctttc
     7201 ttcgccattg gggctgaaaa tggtggaggg agctggaagc cttgcccgtt ttgttgctgg
     7261 attttttggc taaaataatc tgctaattgc tcaagcagct gtaaggtttg ttgattatct
     7321 ttgccggtcg ctttgaacaa aacttgcgag gaaaatggtg gcaaactcat taattgcctc
     7381 atttttaacg cctcatcagc aaaagctcgg tagccttgtt ccagcaaggt tttaagcagt
     7441 gggtgatcag ggtaatgggt ttgtagcacc acttcgcctt ttttctccgc tcgccctgct
     7501 ctgcctgcca cctgtatgta aagctgtgct aatttttctt ccgcacgaaa atcagttgaa
     7561 aataacgctg aatccacatt aacaatcgcc accaacgtca cattcgggaa atgatgccct
     7621 tttgccaaca tttgcgtacc aatcaaaatt tggcttttgc cctctcgaat agcggtcaaa
     7681 tggttttcca atgcaccttt gcgagcggta gaatctctgt ctatacgagt cacttggtaa
     7741 tgagggaatt gctgatttag cacctgctca agttgttctg tgccgacacc ggtagttatt
     7801 aaatgggttg aaccacaatg tccgcattgg cggggaatta ccctttgggt ggcacaatga
     7861 tggcaacgca acactttttg cttttggtgg taagtaaaag gcttattaca cgcctcgcac
     7921 tcacaaaccc aaccgcattc gtgacaaagt aataccgggg caaagccacg gcgatttaaa
     7981 aacagcatca cttgattgcc ttgctctaac tgggttttca tcattgaaag caagcgctcc
     8041 gacaaaccgg cagttacccg ttgcgttttt aaatcaataa tctgctgatt ggcaagttgt
     8101 gcattgccgg cccgagcggt tagtgtcagt tcgataaatt tcccgttttg cacattgtgc
     8161 aaactttcaa gacttggcgt tgccgagccc agcacaatcg gaatatttgc atttttcgcc
     8221 ctaaccaccg ccaaatcccg tgcgtggtaa cgccaaccgt cttgttgctt aaacgagcta
     8281 tcgtgttctt catccaagat aatcacgccc aatttttgaa actgggtaaa taaagcagag
     8341 cgagtgccga ttacaatcgc actttctcca tttttcgccc gcaaccacgc atttaaccgc
     8401 tcagtttcgt tcatattcga gtgcaatacg tcaatttcaa cgttaaagcg agctttaaag
     8461 cgttgtaccg tttgcggtgt tagcccgatt tcaggcacaa gcagcagcac ttgttcctct
     8521 cgcttaagca ccgtttcaat taactgcaaa tacacttcgg ttttgcccga gcctgttacg
     8581 ccattgagta aaaagctcgc aaaagtggtt tgtgcattta aacggctgac cactaaggtt
     8641 tgttgtttat ttaagatcag ccgattgtta gtatttacta acggaaattc acctagtgag
     8701 tcttgccacg cttgtgccat aaacggcaca tcaattttct cgatataccc tttttcgagt
     8761 aagcctttcc aagcagatgg gctacaagcg gtcggttttt caaaatattt tgcacattcg
     8821 gcaagctcgg ttaaccgttc cacctgcttt ttggcttttt tattttcacc gataatcaga
     8881 gatttccgcc cttgctccgt caccacaaaa taattcggtt gaactcgctc agtggaatcg
     8941 ccattgcgta attttatcgg taaggctccg gttagcactt caccaatcgg ggcgtggtaa
     9001 taacgagccg cccagttcag cagttgccac atttctgagt caaaaatcgg gctagaatcc
     9061 aacgctgctt taatcggttt gagtttttcg gttggcacat cactagtttg cgggaaatcg
     9121 accacaatgc cgattttggt ctggcgacca aaaggcacaa ccacccgccc gccttggcag
     9181 gcattgaatg ccggcggtag caaataatca aaataacgat gtaacggcac attcagtgcc
     9241 actctgatta atctcacttc tctaaaccaa ttttgattgc aagcccgata aatatcgagc
     9301 cgcagatttt atttaaccaa tttccaaagg tttgattatg ccgtaaaaaa cgcccaacag
     9361 gtgcagcggc taagactaaa atacttaccc aaataatgct ggtggataaa aacgttagcc
     9421 ccaacagcat aaaaggtatt ttccaaatta ctggatacaa actgcggcaa taacgccaag
     9481 aaaaagagca atactttcgg gtttaataga ttggtaatca acccttgacg gaatatcttc
     9541 catagaggaa gtttgtctag attgattttc tctaacacca acggctctcg ccacatttta
     9601 atgccgagat agcagagata aattgcccct gcgtatttca gaaaattaaa taaagtgggc
     9661 gaatgtgcca caatgcctgc aagcccgagt gaaaccgcaa gaatatggca taaaatgcct
     9721 gctagaatgc cgaatgaaga cattaagccc gactttttcc cctcagcaat agtgcgagtt
     9781 aaaatataga tagtatccga acccggtgta agatttagca gaatacaagc ggtcaaaaat
     9841 ccccaataat ttacaatatc actcattatt cacactcaat ttacgtttac gctgctgacg
     9901 aagagcaaac ataccatcta atactaaaaa tgaaatggag atcaacaagc aaatcatcaa
     9961 caagtaagat tcatttgcta acctttcgcc aattaagaaa gacaccacca acatcaatag
    10021 tggctcaaca tagcctaata aaccaagcaa attaaagggt aaaatcgtgc tggctagcgt
    10081 atagctgata agtgcagtgc cactaattaa acccagtaat gcaataaaat agtaaatatt
    10141 gaggttttgt gtttcgacat attgcatatc ggtttgagag ataaaataac aagctacagg
    10201 gagcaaatat aaaatttcta ccacaaagct atgtaaatgg cttaagccaa actttcggcg
    10261 aaggtaaaaa tagattgggt aacctgtgca aacaaataaa cttgctatcg aaatttttcc
    10321 cgtaaacaaa atattactcg ctacaccaat gaaagcaacc acaatcgcca accatttatt
    10381 caaggaaagc gtttctttat aaaccacttt gccaaatgcc accataataa tcggcattaa
    10441 tagatagccc attgaaacct caatcgcttt tccgctattg ggagcccata aaaacagcca
    10501 catctgcccg cccacaatag atgccgtgat taaaataacc agcaataaat aaggctcttg
    10561 ctttaggcgt tgaagaaata cccaaaactc attttgtttt ttaaataagt ataaagcaag
    10621 gaaaagaaaa ggaatcgtaa ccagcatacg aatgccgaaa atgctcacac ctgccagcgg
    10681 ttttagaaag atcgccaaat agtacataca gccgaataac actgaggctg aaagagataa
    10741 aagaatgcct tttaacatag tgataagaaa gtaattattt tttaattttt caaatctccc
    10801 ctacccctct tttctaaaga ggattgtcga gttctaaata aatgaataat gttcggaggt
    10861 aggggcgggt ccagtgcccg cccgcaaatt aatatcgtta gcggacaggc acaggacctg
    10921 tccctactga tattatagaa cttacaaccc tgcttttata aagtggggta aagggagatt
    10981 cgacttagtc ttgacgatag gttttcaaga aattcgcaag gcgaccaatc gcttcttcaa
    11041 tttgatgtgc ataaggcaaa gttaccacac ggaagtgatc cggttttttc cagttaaaac
    11101 cggaaccttg cactaatagc actttttctt gtcgcaacaa atcgtagatg aatttttggt
    11161 catctttaat gccgtacatt tcggtatcaa ttttcgggaa catatataac gcccctttcg
    11221 cttttacaca gctaataccc ggaatttgta ccaataattc gtgcatttta tttcgttgtt
    11281 ccagcaaacg accgcccggc aacacaaatt cattgatact ttgataacca cctaatgcgg
    11341 tttgaatggc gtgttgcatc ggcgtattgg cacataaacg catagaagag agcatatcca
    11401 acccttcaat aaaacctttg gcttgatgct tcggaccgct cagcaccatc cagccctgac
    11461 ggaaaccggc aacacgatac gccttggata aaccgttata agttacggtt aatacgtccg
    11521 gtgcaagagc agcaatatgg tgatgtaccg caccatcata gacaattttt tcataaattt
    11581 cgtcagcaaa aataattaag ttatgctgac gggcaagttc tgcaatttcc agcaaaattt
    11641 gacggctata cactgctccg gtcgggttat tcgggttgat aaccaaaatc cctttagtgc
    11701 gaggcgtgat tttcgattta atatcttcaa gatcagggaa ccactcattt tcttcatcgc
    11761 acaggtaatg cactgcttta ccaccggcta gggttgaagc tgctgtccat aacggataat
    11821 caggcattgg aattagaatt tcatcgccat catttaataa cgcctgcatc gacattgtaa
    11881 tcagttcaga tacgccgttg ccgatgtaaa catcgtttac atccatacca cgcatacctt
    11941 ttgattgata atattgcaca atcgctttgc gggcagaata caaacctttt gaatcacaat
    12001 agccttgtgc ggttggaaga ttacgaatca catccactaa aatttcatcg ggtgcttcaa
    12061 agccaaaagg ggctgggtta ccgatattta attttaaaat tttatgccct tcttcttcta
    12121 agcgaagtgc ctctttatga attggcccac ggatatcgta acgaacctga gctaacttat
    12181 ctgatttggg aaaacgatcc attgtaaact tcctataatg tattatctaa ttgtagtctc
    12241 atcccgctgt tcaaaaaatc ggtaattcgg aatgaatttg taaacattac tctaatttgg
    12301 gaggaaaaaa aagaggaaat acgttaaaat ggagaccttt ttttcaatca gctaaaaaca
    12361 agcggtttct ttttctgatt tttttgcaaa tgcttatttt tcatcaatta aaacaagaac
    12421 ttacaaaaag ttactcaaaa gtgggaagag agcaaggatt ggtcgccatt caagcctcta
    12481 tgccgctatt ggaggcaaat attccgctac tcggttggtt gaaaacacaa aaaacaagct
    12541 accctcactt ttttctgcaa tatcgtgata cagatcagac cattgccacc attggcacac
    12601 ttcgccaatt ttatacgcta gaagctgcac aatcttttat tcaacaacat catttcccgt
    12661 taatcggcgg gcttcaattt gaaggcaata cgcaatttat tttgcctcaa ttttcattgg
    12721 taaaaaatca gcaaaattta accgcttgct tctattttga tagtgataac tttgaacaac
    12781 aagcggttat ttttgaacaa tttcttgcaa atttcagcca aattaccgaa ttaggactaa
    12841 cggataatcc gctcgtttca atgagtgcca ccagccattt tgagcaatgg aaagccaata
    12901 ttgaaaaagc gattgtttct attgagcagg gcgattttca aaaagtggta ttggcaaatg
    12961 cgatgagact tcattttgag caacccattt gtgcttacag cttgctggca caaagccaaa
    13021 aaacaaattt aggttgttac cactttttat gggcggaaag tgctgatgtt gcctttcttg
    13081 gctcaacccc tgagcggcta tatcaacgcc aagggctaca cttttctacc gaagccctcg
    13141 ccggcaccgc tgcggttacc accagtgaag tgcaaaccga actcaatgca caatggctgt
    13201 taagtgatcc caaaaatatc tatgaaaatc aattagtggt tgatgacatt gaaaaccaac
    13261 tcaaagattg cgtgaccgaa tttgcagtat ccgaggcaaa aattaagcgt ttgcataatg
    13321 tgcaacacct acgccgccaa attcaagcaa cgctcaaacc ggacacctca gattcagatt
    13381 gcttaagcaa aatccaccca actgcggcag ttgcagggct tccccgccaa aaagcaaagg
    13441 gttttattac cgaaaatgag ccttttaccc gccattggta tgcaggtaca ttaggcgtaa
    13501 tgggcaacga ggaagccgaa ttttgcgtaa cactccgttc tgcattaatt tcacaaaatt
    13561 caattacgct ttatgccggt gccggcattg tgtcaggctc agatccacaa tcggaatggc
    13621 aagaaattaa acgtaaggca caaggaatgg caaaactgtt ggatgttgat ttagtaacaa
    13681 aaggggaact gtaagctagg ctttcagaac ttaatctctt aattatttct ttctatattt
    13741 tcatttccaa cttcccaaca aaatatatta ttgccaccaa attagtagtg aatattccat
    13801 aattaaaaa
//
LOCUS       DANLZQ010000074        13732 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.074, whole genome shotgun sequence.
ACCESSION   DANLZQ010000074 DANLZQ010000000
VERSION     DANLZQ010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13732)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13732)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13732
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.074"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(97..3630)
                     /gene="mfd"
                     /locus_tag="PXE50_001811"
     CDS             complement(97..3630)
                     /gene="mfd"
                     /locus_tag="PXE50_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HDL5622704.1"
                     /translation="MSLISLNLPKSDGNFQDHQTLGNLVGHSDTLAISQAARAFYGLT
                     VVVTPDTRTALRLEKALPQFAGLPVQLFPDWETLPYDNFSPHQDIISARLSALFELQQ
                     GRQQILLLPINTLMQKVCPPNYLANNVLLIKKGDRFSIQKLRLQLENAGYRAVEQVLE
                     YGEYAVRGSILDLFPMGAEEPFRLDFFDDEIDSIRTFDVDNQRTKTEIAEINLLPAHE
                     FPTDSNGIEHFRAKFREKFGEIRREPEHIYQQVSKGILNAGIEYWQPLFFEEMASLFD
                     YFPAQTLFITFADIQQKAEQFHQDTQNRYESHRVDPMRPLLPPSDLWFAIDEVNRWLK
                     GYPRLTITSEKIRKSAAKMNANVANLPDIAIQSSAKEPFSAFQQFRQKFDGNILFSVE
                     SEGRRETLLDLLAPLGVKPKQVNSLDEAQGLPFSLIISPLDQGFVVETGGHGTRPYDD
                     ELNTNGENDNNYVGAGPVPARNLAIICETDLLGERVQTRREKNRKAVNPDTLIRNLAE
                     LKIGQAVVHLENGVGRYGGLTVLDAGGIKAEYLVLHYANDAKLYVPVASLHLISRYIG
                     GADETAPLHKLGSEAWAKTRQKAAEKIRDVAAELLDVYAKRESQTGFAFAYDKAEFDQ
                     FSATFPYEETDDQKIAINAVISDMCQAKAMDRLVCGDVGFGKTEVAIRATFLAVMNHK
                     QVVILAPTTLLAQQHYENFKDRFANYPVNVEVLSRFKTAKEQKTILQNVAEGKVDILV
                     GTHKLLQDDVAFRDLGLLVIDEEHRFGVRQKEKIKQLRANVDILTLTATPIPRTLNMA
                     LNGMRDLSIIASPPARRLLIKTFVRQSDEMVIREAILREILRGGQVYYLHNDVATIEN
                     CAEKLAELVPEARIVIGHGQMRERELERVMSDFYHQRFNLLVCSTIIETGIDVPTANT
                     IIIERADKFGLAQLHQLRGRVGRSHHQAYAYMLTPHPKTLTKDAEQRLEAMSTIDNLG
                     AGFALATHDLEIRGAGELLGSEQSGQIESIGFSLYMDLLENAVKALQEGREPSLDEIT
                     QHQAEIELRVPALLPDDYLPDVNMRLSFYKRIASSENLQSLNDLKVELIDRFGLLPEA
                     TKNLFAITQLRLSAQTLGIKKIDAGIHGGYLEFKPTAQPDPMKFIALIQKQPAVYSFE
                     GAVKFKFRLALEDNRKRLEFVENLLREVVGG"
     gene            3791..5008
                     /locus_tag="PXE50_001812"
     CDS             3791..5008
                     /locus_tag="PXE50_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine transporter"
                     /protein_id="HDL5622705.1"
                     /translation="MKNKILGSALMIAGTTIGAGMLAMPLTSAGMGFGATALLLVGLW
                     ALLAYTGLLFMEVYQTAPQKDVGVASLAEQYFGLIGRVLATFSLLVLLYALLAAYITG
                     GGSLLAGVMPEMADADMKLKISILIFTAVLGTFVVVGVKSVDGLTRVLFLGKIVAFIA
                     VLLMMLPKAKLENLTAIPLDNLLIISAIPIFFTAFGFHVIMGTINSYLDADIGKIRKS
                     IYIGTAIPLVAYLLWQLATHGVLSQNEFTTILTQDPTLNGLVKATSQITGSTILGEMV
                     RLFSVLALITSFLGVSMGIFEGVGDLLKRLNLPTNRLWLTIATFTPPILFALFYPNGF
                     IKALGYAGLLFAFYGMILPIGLAWKARRQYPNLPYRVIGGNLALVVALIAGIIIMVIP
                     FLIQAGYLPQAVG"
     gene            complement(5088..5594)
                     /gene="hutX"
                     /locus_tag="PXE50_001813"
     CDS             complement(5088..5594)
                     /gene="hutX"
                     /locus_tag="PXE50_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme utilization cystosolic carrier protein
                     HutX"
                     /protein_id="HDL5622706.1"
                     /translation="MISIEQQTALRNELAENPGQILEMLAAKYQCTLEEVMLNLPAEM
                     LKVTEGERFAEVLQQIHEWDDAITLISHTEDTIIEFVGKLPSGSISRGFYNFEHKEGG
                     GLQGHLRYENCAKIYLLDRPFMGKRTVSLIFINKKGNAMFKIFVGREKIGGALKEHQI
                     KALYQLIG"
     gene            complement(5649..7727)
                     /locus_tag="PXE50_001814"
                     /pseudo
     CDS             complement(5649..7727)
                     /locus_tag="PXE50_001814"
                     /inference="COORDINATES: protein motif:HMM:TIGR01786.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent
                     hemoglobin/transferrin/lactoferrin family receptor"
     gene            complement(7694..8077)
                     /locus_tag="PXE50_001815"
     CDS             complement(7694..8077)
                     /locus_tag="PXE50_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HDL5622707.1"
                     /translation="MVFTSYSIKSKKLCPTILALSVSSILSSQATYAEETTAELSEVN
                     VVAKEDVKASIEKKNKEIIQQELIQNNRDLVRYSPDVGIVNQGRHQKGFAIRGVEDNR
                     VGISIDGVSLFLIQKKIPFINAMVI"
     gene            8232..8750
                     /gene="hutZ"
                     /locus_tag="PXE50_001816"
     CDS             8232..8750
                     /gene="hutZ"
                     /locus_tag="PXE50_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme utilization protein HutZ"
                     /protein_id="HDL5622708.1"
                     /translation="MTTNRQEVLQNRLGPEIEELKQQIKTIMLATIDKDGVPNVSYAP
                     FVINNGEYQVLITTIARHARNLQEVPKVSLMLIEDESKSRQIFARRRLTFDATVRMIE
                     RTDEEWNNSIAALKARHGDLVDELSNMQDFKLFSFKPTAGLFVKGFGKAFDVGVDDLI
                     NVVHLDQGHQTA"
     gene            8900..11512
                     /gene="pepN"
                     /locus_tag="PXE50_001817"
     CDS             8900..11512
                     /gene="pepN"
                     /locus_tag="PXE50_001817"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HDL5622709.1"
                     /translation="MQPKAKLRKDYRAPDFTITDIYLDFQLDPDRTFVTSKLTVVRKN
                     PEATTLRLDGHSFDFLSLKYNGEPFSAFQKDDESLTLNLADVPAERFELEIETALNPA
                     QNTSLQGLYKSGDGFCTQCEAEGFRQITYMLDRPDVLAKYTTKITASKSKYPYLLSNG
                     NHIAQGDLHDGRHWVEWQDPFFKPSYLFALVAGDFDLLQDKFITKSGREVTLEIYVDR
                     GNLDRAPWAMESLKRSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKF
                     VLAKPETATDTDYLDIEAVIAHEYFHNWTGNRITCRDWFQLSLKEGLTVFRDQEFTSD
                     LWSRSAKRIEDVRLLRTVQFAEDASPMAHPIRPEKVIEMNNFYTVTVYEKGAEIIRMI
                     HTLLGEEKFQQGMQLYVARHDGSAATCEDFVKAMEDASGVNLEQFRRWYSQSGTPELT
                     ISDEYDETRKAYRLHISQMTPATHDQMDKLNLHIPLKVALYGEQDGKRIPLQYELLTV
                     SDVLDVTAEHQTFEFHNVTQRPVPALLCDFSAPVRLDYNYTTEQLLTLLKHAENDFVR
                     WDAAQMLYTNELRENLSRYQQHQPLSFSEGLVNALTFVLDNSASLPELTALTLTLPKE
                     TEFAESFKTIDPQGIAVVREFMQHSIAHALQDKLLAVYHQNQCGEYQVVAEDIAKRAL
                     RNACLSYLAFTDLGNALVHKHYNNADNMTDTLAALQAATKAQLSCRDALLADFEQKWK
                     HDGLVMDKWFMLQATRPDDDVLSIVQNLMEHPSFNFNNPNRLRSLVGAFCGQNPKAFH
                     AIDGSGYRFLVDTLIKLNESNPQVAARLIEPLIKLSRYDNQRQTLMRRGLERLRELDN
                     LARDLFEKIEKALD"
     gene            complement(11572..11844)
                     /locus_tag="PXE50_001818"
     CDS             complement(11572..11844)
                     /locus_tag="PXE50_001818"
                     /EC_number="3.6.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HDL5622710.1"
                     /translation="MVAKLFSVYGRVQGVAFRFFTLQEANRLGIKGYVRNRDDGSVEV
                     VAEADEQTIAQLENWLQQGSPAAKVERVIVSDYLGSERFKRFEVRY"
     gene            complement(11898..13532)
                     /locus_tag="PXE50_001819"
     CDS             complement(11898..13532)
                     /locus_tag="PXE50_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005700110.1"
                     /note="is involved in the transport of the murein peptide
                     L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter substrate-binding
                     protein OppA"
                     /protein_id="HDL5622711.1"
                     /translation="MQSKFSLSLLTTSLVLGLSANVFAAKVPEGTTLAEKQEITINNG
                     FEPSSFDPHKIEGVPESQVAYQLFEGLVTKDSDGNIQPGVAESWENTPDYKTWTFKLR
                     QDAKWSNGDAVTAHDFVFAWQRLVNPLTASPYSSYLTYLNVENAQDIIDGKKKPEELA
                     VKAIDDHTFQVQLSQPVPYAVELATHSSLLPVHKATVEKHGDAWVQKGNLVGNGAYTL
                     ADHVINEKIVFERNKNYWNDKETVINKATFLAIANAATDVSRYRAGDLDMTNYALPPE
                     QFATLKKEIPNEVFTARTLSTYYYEINHKRAPFDNVKVREALNLALDRTIITDKVLGQ
                     GQTPTYVFTPPYIHEGEKIQQPAYSKDSMADRKAKALKLLEEAGYSKANPLKFTILYN
                     TNDNHKKIAIAVSSLWKQGTDGIVDVKLENQEWKTFLDTRRNANYDVSRAGWSADYNQ
                     ATTFVNYFLSNSSNNTAFYKSQAYDDAVAESYKATDAAGRAAAYAKAEEQLAKDYAII
                     PIYNYVNPRLVKPYVKGYEGKDPQDDILLRNLYIVK"
BASE COUNT         3815 a         3036 c         2780 g         4101 t
ORIGIN      
        1 gcctagatga aattactgga ttcgcaataa acaaaaacga tttttacgat acagatcgca
       61 aaaatcgttt ttcaagattg acaaccttag gaggctttat ccgcccacaa cctcccttag
      121 caaattttcc acaaattcta accgcttgcg gttgtcttcg agtgctaagc ggaatttgaa
      181 cttcaccgcc ccttcaaaac tgtacaccgc tggttgtttt tggattaagg cgataaactt
      241 cattgggtcg ggctgggctg tcggtttaaa ttcaagataa ccgccgtgaa tgccggcatc
      301 gattttctta atcccgagcg tttgtgccga caagcgaagt tgggttatcg caaacaggtt
      361 tttggttgcc tctgggagca agccgaagcg atcgatcagc tccactttca agtcgttcag
      421 gctttgcaga ttttccgagc ttgcgatccg cttgtagaac gacagacgca tattcacgtc
      481 aggcagataa tcgtccggca ataaggccgg tacacgcaat tcaatctccg cttggtgttg
      541 ggtgatttca tcgaggctcg gttctcgccc ttcttgcaaa gctttgaccg cattttcgag
      601 caagtccata tagagcgaaa aaccgatgct ttcaatctgt ccgctctgct ccgaaccgag
      661 caattcgcct gcaccacgaa tttctaaatc gtgggtcgcc aacgcaaaac cggccccgag
      721 attatcaatg gtactcatcg cctccaagcg ttgctcggca tctttggtga gcgttttcgg
      781 gtgcggtgtg agcatatagg cgtaggcttg gtggtgcgag cgtccgaccc gtccacgcag
      841 ttggtgcagt tgtgccagcc cgaatttgtc cgcccgttcg ataataatgg tattggcagt
      901 cggcacgtca atccccgttt caataatggt ggagcaaacc agcaggttaa agcgttgatg
      961 atagaaatcg ctcatcaccc gctccaattc acgctcacgc atctgcccgt gtccgatcac
     1021 aattcttgcc tctggcacga gttcagccaa tttctcggca caattttcaa tggttgccac
     1081 atcgttatgg aggtagtaaa cctgcccacc acgcagaatt tcacgcaaaa ttgcctcacg
     1141 gattaccatt tcatcacttt gtcgcacaaa ggttttgatt aaaagtcggc gagccggcgg
     1201 gctggcgata atcgagagat cacgcattcc gttgagtgcc atattcagcg ttcttggaat
     1261 tggcgtggcg gtgagggtca gaatatccac attggcacgc agttgtttga ttttctcttt
     1321 ttggcgtacg ccgaaacggt gttcttcatc aatcactaaa agcccaagat cacggaacgc
     1381 tacatcgtct tgcaacagtt tgtgcgtgcc gaccaaaata tccactttgc cctccgccac
     1441 attttgcaaa atcgttttct gctctttggc ggttttaaag cgagacagca cttccacatt
     1501 cacagggtaa ttggcgaaac ggtctttgaa attctcataa tgctgttggg cgagcaaggt
     1561 agttggggca agaataacca cctgtttatg gttcatcact gccaagaaag tcgctcgaat
     1621 ggccacttcg gttttgccga agccgacatc gccacacacc aatctatcca tcgctttggc
     1681 ttggcacata tcgctaatta cggcattgat ggcaattttc tgatcgtccg tttcctcata
     1741 agggaaagtg gcactaaact gatcaaattc cgctttatcg taggcaaacg caaaaccggt
     1801 ttggctttct cgtttggcat aaacatcaag caattctgcc gccacatcac ggattttttc
     1861 cgctgctttt tggcgggttt tcgcccacgc ttcactgcct aatttatgta gcggcgcagt
     1921 ttcatccgcc ccaccgatat aacggctgat taaatggagc gaggcaaccg gcacatagag
     1981 tttggcatcg ttagcataat gtagcacgag atattcggct ttgatcccac cagcgtccag
     2041 cacggttaag ccaccgtaac gccccacgcc gttttccaaa tgcaccaccg cctgtccgat
     2101 tttgagttct gctaaattac ggattaaggt atcaggattg acggctttgc ggtttttctc
     2161 acgccgtgtt tgcacacgtt cgcccagcag gtcggtttcg cagatgatgg caaggttgcg
     2221 ggcgggcaca ggacccgccc ctacgtagtt attatcattt tcgccatttg tatttaattc
     2281 atcatcgtag ggacgggtcc cgtgcccgcc cgtttccacc acaaaccctt gatcaagcgg
     2341 tgaaataatc agggaaaatg gcaaaccttg tgcttcatct aatgaattga cctgcttcgg
     2401 cttcacccca agcggagcaa gcaaatccag caaggtttct cttcgccctt cgctctccac
     2461 cgaaaacaga atgttgccgt caaatttttg gcggaattgc tggaaagcag aaaacggctc
     2521 tttggcagag gattgaatag caatatccgg caagttagcc acatttgcat tcattttcgc
     2581 tgctgattta cggattttct ccgaagttat cgttaaacgg ggatagcctt tcagccagcg
     2641 atttacctca tcaatcgcaa accagagatc actcggcggc agtagcggtc gcatcggatc
     2701 cactcggtgg ctttcatagc ggttttgggt atcttggtga aattgttcag ctttttgctg
     2761 aatatcggcg aaagtgataa acagcgtttg ggcagggaaa tagtcaaaca gacttgccat
     2821 ttcctcaaaa aacaacggct gccaatactc aatccctgca tttaaaatgc ctttgctgac
     2881 ttgctgataa atatgctccg gctcacggcg gatttcaccg aatttttcac ggaatttggc
     2941 tctaaaatgc tcgatcccgt tgctatcagt cgggaactcg tgtgccggca gtaaattaat
     3001 ttcggcaatt tccgttttgg tgcgttggtt atccacatca aaagtgcgga tactgtcgat
     3061 ctcatcatcg aaaaaatcga ggcgaaacgg ctcttctgct cccatcggga ataggtctaa
     3121 aatcgagcca cgcacggcgt attcaccata ttccaacacc tgttccaccg cccgatagcc
     3181 ggcattttcc agttgtaacc gcagtttttg aatcgaaaaa cggtcgcctt ttttaatcaa
     3241 cagcacattg ttagcgagat aattcggcgg gcagaccttc tgcattaagg tgttgatcgg
     3301 caacagcaaa atctgctgtc gcccttgttg cagttcaaac agggcagaaa gtcgggcgga
     3361 gataatgtct tggtgcggcg aaaaattgtc ataaggcaag gtttcccaat cggggaacag
     3421 ttgcactggc agccctgcaa actgaggcaa ggctttttcc aagcgtaacg ccgtgcgggt
     3481 gtcgggtgtg acaaccaccg tcaagccgta aaaggctcgg gcagcttggc tgatcgcaag
     3541 ggtatcggaa tgcccgacaa ggttaccgag ggtttgatga tcttgaaaat tgccgtcaga
     3601 tttcggcaga ttaagtgaaa ttaaagacat acaagcggtc tgttttaaat aaaaaattgc
     3661 aaattgttgc ttagtttact aaagcacggc tgattgtgca aaataagcgg agaaattatg
     3721 ttatctagat cgcattgcga aaaaattctg ataaaatgtt cccctttttt aactcttact
     3781 cacacatatt atgaaaaata aaattttagg aagtgcatta atgattgcag gcactaccat
     3841 tggtgcagga atgcttgcaa tgccactcac ctctgcagga atgggttttg gggcaaccgc
     3901 attactctta gtcggattat gggctttatt ggcctacacc ggtttattat ttatggaagt
     3961 ttatcaaacc gctccgcaaa aagatgttgg agtggcaagc cttgccgagc aatactttgg
     4021 cttaatcggg cgtgtattag ccactttcag tttgctcgta ctactttatg ccctacttgc
     4081 ggcttatatt accggtggtg gttcactgtt agccggtgta atgcctgaaa tggcagatgc
     4141 tgatatgaaa ctgaaaatca gcattttaat cttcactgcg gtattaggta catttgtggt
     4201 agtcggcgtg aaatcggttg atggtttaac ccgagtactg tttttgggaa aaattgttgc
     4261 ttttattgcc gtgttgctga tgatgctgcc taaagcgaag ctggaaaact tgacagcaat
     4321 tccattagat aacttactca ttatttctgc tatacccatt ttcttcactg cgttcggttt
     4381 ccacgttatt atgggaacaa ttaatagcta tttagacgca gatatcggca aaattcgtaa
     4441 atctatttat atcgggacgg caattccgct agtggcttat ttattgtggc agctcgctac
     4501 acacggggta ttaagccaaa atgaattcac cacaattttg acacaagatc cgaccttaaa
     4561 cggcttggtg aaagccacta gccagattac cggtagtacg attttaggcg aaatggttcg
     4621 cttattctca gtgcttgcat tgattacctc atttttaggg gtttcgatgg gaatttttga
     4681 aggcgtgggc gatttgttaa aacgcttaaa tctaccgact aaccgtttat ggctgaccat
     4741 cgccaccttt acaccgccaa ttctgttcgc tttattctat ccgaacggct ttattaaggc
     4801 attaggttac gccggtttac tctttgcgtt ctatggtatg attttaccta tcggcttagc
     4861 gtggaaagca cgtcgccaat atccgaattt accttaccgt gtgattggtg gtaatttggc
     4921 attagtggtt gcgttaattg ccggtattat cattatggtc attccgtttt taattcaggc
     4981 tggctattta ccgcaagcgg taggctaata ttgaaaaggg ctacgattca atatcgtagc
     5041 cctttctata agttacaagc ggtcattttt cgatgacttt ttacagatta gccaatcaac
     5101 tgatacagcg ccttaatttg atgctctttt aatgccccgc caattttctc tctgccgaca
     5161 aaaatcttaa acattgcgtt gcctttttta ttaatgaaaa tcagtgaaac agtacgtttt
     5221 cccataaaag gacgatccaa caaataaatt ttggcacaat tttcgtagcg tagatgccct
     5281 tgtaagcctc cgccctcttt atgttcgaaa ttgtaaaatc cacgagaaat tgaaccgctt
     5341 gggagctttc ccacaaactc aataatggta tcttccgtat gcgaaatcag cgtaatcgca
     5401 tcgtcccatt cgtggatttg ctgtagcact tcggcaaaac gttccccttc ggttactttt
     5461 agcatttcag ccggtaaatt cagcattacc tcttccagcg tgcattgata ttttgccgct
     5521 aacatttcta aaatttgccc cggattttcg gctaattcat tgcgtaaggc ggtttgttgt
     5581 tcgattgata tcattaaatg ttcctttaag taaagagagt ttcttagctc tctaagtaaa
     5641 tttgtaaatt agaaacggta ttcaaaatta gccgagaagt tacgtccagg ttcataatag
     5701 cgttgtaatc caggatagcc accgtaagtt gcattttcac gtactccaac agaattaacg
     5761 attccacctg ttgtatttaa accacgtaaa gtatcccaag tatggtattt acggttaaac
     5821 aaattataaa taccggcacg taatgtaata ttctcagttg gtttatagaa accgtataaa
     5881 tccacaacaa aggctttagc atttaagtgc ttccaggtat ctaaacctgt ctcgtgagaa
     5941 tattcagtac aacgaatgtc atattcatcc ccccaataag ggtaatacgg atttggcgtt
     6001 ctatcctctt taaggcattt ttccggtaat gtttttaaat attttgcatc tttcgccttt
     6061 ttagccccca agaatgtgaa gcgagaaaat actccccatt taccttcagg ttgttcataa
     6121 tctaagccaa ctacggcttt aatcggctga atagaaagta aatctgcccc gttagacata
     6181 ctacctttgc tgtaaccgaa ggctccaaat agcttccagc cttcaggtat tggcatagct
     6241 gaatttaaat tccatttacc actcacttct agcccgtaga ttttcgcaga atcaatattt
     6301 tgcatttgct gtaccgggcg ccaaaactct ctaccatatg cttggtaaac atcccaggtt
     6361 tcttgctccc ataaaaaatc tttatattta gtatggtgga aattaactga gagcagccca
     6421 acattgccac taccttgcaa acttaaattt tggcttaaac tacgttccgc ttttaggttt
     6481 ggattggaca tccaagctcc tgcagcatta tcacggtaat caaaatacat ttctgatgca
     6541 tttggaatac ggaagcctgt cccaatgtta tatcctactt tccatgcctc agtcagatgt
     6601 ttttctaaac cggtaaccca agttagttga ttaaatttcg cattgtcagt ttttacgcag
     6661 ttacgacaaa caagaccatt gagttcttgt tgttcatact tcgcccaatc ataacgaatg
     6721 cctagcgttg caatccaatc atgcgttaaa tcaatcttat cgtgcaatga aaaagtgtgc
     6781 tgtttcgttt taattgggta catcatcgta gaatcgggag aatttaccca aacaccggat
     6841 aaataaaccg agtccttatg taatacatcg aaatctctct ctgcagtaga ggctttgaaa
     6901 gatagctgat gagtccattt accaaattct aatgcttggc tgtctaaacg gaaatttaag
     6961 cgtttcaatt cagtattaaa aatacgaata ttattgtcac ttggttttct ttgtttagca
     7021 gggctccagt ctgttgcatc ttcagcgcgt gtaccttcat agttataagc agatgtttca
     7081 gtatcttgat aatctgcatc tatcttcgct agagatatcc attttgactc tgggaaatac
     7141 tcataaaaaa catttactgt atcacgttta ctacggtctt ccgcttcacg ccaaaaagaa
     7201 gtaatagtaa cggctgaatc ttcgataata taatttttat tattttgccc actgtaagaa
     7261 acaccaacgc ggtgattatc attaaatcga taagcaaatt tggctaaata attatgatga
     7321 ttatgagtag aatcatcagg agtttgttta ctactgcgta aagagcgagt ttgtagagaa
     7381 tcttcaggaa gtgtataacc tcctgcactt ttcatttcat gcccatggcg atttgaataa
     7441 accaatatcg cctcagcttt ctcacctaaa tatccaacac cgaatgtatt caaccattca
     7501 ttattacgag taccatatcc tgtgcgataa aaagcaccaa atttattacc gttacgaaca
     7561 atatcataag gctcaagcgt ccgataatta actccgccgc ctaaattacc actaccttga
     7621 ttgaaagaat ctgcaccttt agatacttca atagtacgag ctaattccgg atctatagat
     7681 tggcgagatg tatttaaatt accatagcgt ttataaaggg aattttcttc tgaatcagga
     7741 aaagcgagac accatcaata cttattccta cacggttgtc ttccactcca cgaatagcaa
     7801 atcctttttg atgtctacct tggttaacaa tgccaacatc agggctataa cgaactaaat
     7861 ctcgattatt ttgaatcaac tcttgctgaa ttatctcttt atttttcttt tctatagaag
     7921 ccttcacatc ttctttagca acaacattta cttcagataa ttccgctgtt gtttcttccg
     7981 cataggtagc ttgtgaagac aaaatgctac taacgcttaa agccaatata gtcgggcaca
     8041 attttttaga ctttattgaa taagaggtaa acaccatgat tctccctaga tagattttta
     8101 atatacttta ttattaataa gatgtattat cagttacatc acatttatag tcaataatga
     8161 ttctcatatg gattgaaagt tttcactctt tatagtaatc taaaaaaaca ctatttaaat
     8221 tgaggtattt tatgacaacc aaccgtcaag aggtcttaca aaaccgttta ggtccagaaa
     8281 ttgaagaatt aaaacaacaa atcaaaacta taatgcttgc aaccatagat aaagatggtg
     8341 taccgaatgt gagctatgcc ccttttgtaa ttaataacgg cgaatatcaa gtcttaatca
     8401 ctactattgc ccgtcacgct cgtaatttac aagaggtgcc aaaagtctct ttaatgctaa
     8461 ttgaggatga aagtaagagc cgtcaaattt ttgcccgtcg tcgcttaacc tttgacgcaa
     8521 cagtgcgaat gattgaacgt actgatgagg aatggaataa tagcattgca gcacttaaag
     8581 ctcgtcacgg cgatttagtt gatgaactgt caaatatgca agatttcaag ctctttagct
     8641 ttaagccaac ggcaggctta tttgtaaaag gatttggtaa agcctttgat gttggtgttg
     8701 atgacttaat taatgtcgtt catttagacc aaggccacca aactgcctaa ttgcgaaata
     8761 aactcacggc tataaataat cctatttata gccgttttta ttgcgacaag cggtcaaatt
     8821 ttttggaaaa tttaccgcta ttttagtaca ataacgacac tattctatga gctaaacgca
     8881 actaaaaaaa ggaaatccta tgcaacctaa agcgaaactc agaaaagatt atcgagctcc
     8941 cgatttcact attactgata tttatcttga cttccaactt gacccagatc gcacttttgt
     9001 cacctcaaaa ctaactgtcg tgcgtaaaaa tcctgaggcg acaacacttc gtttagacgg
     9061 tcatagtttc gatttccttt cgcttaaata taacggcgag ccgttttccg cctttcaaaa
     9121 agatgatgaa tctttaacct taaatttagc cgatgtgcct gccgagcggt tcgagcttga
     9181 aattgaaacc gcattaaatc cggcacaaaa cacctcgtta caaggtttgt ataaatcggg
     9241 cgacgggttt tgcacccagt gtgaggctga aggtttccgc cagattacct atatgctcga
     9301 ccgccctgat gtacttgcaa aatatacgac aaaaatcacc gctagtaaga gcaaataccc
     9361 gtatctgctt tctaacggca accacattgc ccaaggcgac ttgcacgatg gcagacactg
     9421 ggtggaatgg caagatccgt tctttaaacc aagctattta tttgccttgg ttgcggggga
     9481 ttttgactta ctccaagata aattcatcac caaaagcgga cgtgaagtca cgcttgaaat
     9541 ttatgtcgat cgtggaaatt tagaccgtgc accttgggcg atggagagct taaaacgttc
     9601 aatgaaatgg gatgaagagc gtttcggttt ggaatacgat ttagatattt atatgattgt
     9661 tgccgttgat ttcttcaata tgggagcaat ggaaaacaaa gggttaaata ttttcaattc
     9721 caaatttgta ttggcaaaac cggaaaccgc aaccgatacg gattatttag atattgaagc
     9781 ggtgattgcc cacgaatact tccataattg gacgggcaac cgcattacct gccgtgattg
     9841 gttccaacta agcttaaaag agggcttaac cgtcttccgt gatcaggaat ttacctccga
     9901 tttatggtct cgttcggcaa aacggattga agatgtgcgt ttactgcgta ccgtacaatt
     9961 tgccgaagat gccagcccga tggctcaccc gattcgcccg gaaaaagtga ttgaaatgaa
    10021 taatttctac accgtgactg tgtatgaaaa aggggcggaa attattcgta tgattcacac
    10081 cctgttaggc gaagaaaaat tccagcaagg tatgcaactt tatgtggcaa gacacgatgg
    10141 ttctgcggca acttgtgaag atttcgttaa agcaatggaa gatgcttcag gcgttaatct
    10201 tgaacaattc cgccgttggt atagccaatc cggcacgcct gagctcacca tttccgatga
    10261 atatgatgaa acccgcaagg cataccgctt gcatatttca caaatgacac cggcaaccca
    10321 cgatcagatg gataaactca atctgcatat tccgcttaaa gtagcgttat atggtgaaca
    10381 ggacggtaaa cgcattccgt tacaatatga attattgacc gtaagcgatg tgttagatgt
    10441 aaccgcagaa caccaaacct ttgagtttca taatgtaaca caacgcccgg tgcctgcatt
    10501 actgtgtgat ttctctgcac cggtacggtt agattacaac tataccaccg agcagctttt
    10561 aaccttactc aaacacgctg aaaatgattt tgtacgctgg gatgcagctc aaatgctcta
    10621 taccaatgaa ctgcgtgaaa atttaagccg ttatcagcaa catcaaccac tcagcttctc
    10681 agaagggttg gtgaatgccc taacgttcgt gttggataac tcagcaagcc tgccggaact
    10741 aactgcatta accctcacat tgccaaaaga aaccgagttt gcagaatcgt tcaaaaccat
    10801 tgacccacaa ggtattgcgg ttgtgcgtga atttatgcag cattccattg ctcacgcctt
    10861 gcaagataag ttattagcgg tatatcacca aaaccaatgc ggggaatatc aagtcgtggc
    10921 tgaagatatt gctaaacgag ccttgcgtaa tgcttgctta agctatttag cctttactga
    10981 tttaggcaac gcgttggtgc ataagcatta caataatgcc gataatatga ctgatacgct
    11041 tgctgcatta caagccgcaa ccaaagccca gctaagttgc cgtgatgcat tattagccga
    11101 ttttgagcaa aaatggaaac atgatggttt agtgatggat aaatggttta tgctacaagc
    11161 cacccgaccg gacgacgatg tgttatccat cgtgcaaaat ttaatggaac acccaagttt
    11221 taactttaat aacccgaacc gtttacgttc attagtaggt gcattctgcg gtcaaaaccc
    11281 gaaagccttc cacgccattg acggttcagg ctatcgtttc ttggtagata cgctgattaa
    11341 acttaacgaa agtaacccac aagttgctgc tcgacttatt gagccgttaa ttaaactctc
    11401 acgctacgat aaccaacgcc aaaccttgat gcgtcgtggt ctagaacgcc tgcgtgagct
    11461 ggataattta gcacgagatc tgtttgagaa aattgaaaaa gcgttagatt aaaccaagca
    11521 atacaagcgg tgtcgtttgc aaattttttt acaaatgaca ccgcttgtta gttaatacct
    11581 tacctcaaac cttttaaacc tttctgagcc aagataatcg ctcacaatta cccgttccac
    11641 ctttgcagca ggtgagcctt gttgtaacca attttccagt tgagcgattg tctgttcatc
    11701 cgcttcagct accacttcta ccgagccgtc atcacgattt ctgacatagc cttttatgcc
    11761 taatcgattc gcttcctgca aggtaaaaaa ccgaaaagcg acaccttgaa cccgtccgta
    11821 aaccgagaat aattttgcga ccattcttcc cccataaaaa taggctgctt atttttcaat
    11881 aaacagccca taatgtctta tttcacgatg tagaggttac gcagtaaaat atcatcttgc
    11941 ggatctttac cctcatagcc tttcacgtaa ggtttcacca aacgtgggtt tacatagtta
    12001 taaatcggaa taatcgcata atctttggct aactgctcct ctgcttttgc ataagcagct
    12061 gcacgaccag ctgcgtctgt cgctttgtaa gattctgcta ccgcatcatc ataagcttgg
    12121 ctcttataaa acgcagtatt gttgctggag ttcgataaga aatagttcac aaaggtggtt
    12181 gcttggttat agtctgccga ccaacctgca cgagaaacat cataatttgc attgcggcgg
    12241 gtatctaaga atgttttcca ctcttggttt tctaatttca catcaacaat gccgtctgtg
    12301 ccttgtttcc ataatgatga aactgcaatc gcaattttct tgtggttgtc gttggtatta
    12361 taaagaatag taaattttaa cgggttcgct ttactgtaac cggcttcttc caataatttc
    12421 aacgctttgg cttttctatc tgccattgaa tctttggaat aagcaggttg ctggattttt
    12481 tcaccctcgt gaatataagg cggtgtaaat acataagttg gtgtttgacc ttgtcctagc
    12541 actttatcgg taataatggt gcgatctaaa gctaagttta acgcctcacg cactttcaca
    12601 ttatcaaacg gtgctcgttt atggttaatt tcatagtaat aagtagaaag ggttcttgcc
    12661 gtaaacactt cgtttggaat ctcttttttc aaggttgcaa actgctccgg tggaagagca
    12721 tagttggtca tatccaaatc accggcacgg taacgtgaaa catcagttgc ggcattagca
    12781 atggctaaga aagtcgcttt attaatcacg gtttctttat cattccaata atttttatta
    12841 cgctcaaaca cgattttttc attaataacg tgatcggcta aggtataagc cccgtttcca
    12901 accagattgc ctttttgcac ccacgcatcg ccgtgtttct caacggttgc tttgtgtaca
    12961 ggtaataaag aagagtgtgt tgccagctca actgcatacg ggacaggttg gcttaactgc
    13021 acctggaaag tatgatcatc aatcgcttta actgctagtt cctccggttt tttcttgccg
    13081 tcaataatat cttgagcatt ttctacattg agataagtta aatagcttga ataaggtgaa
    13141 gccgtaagtg gattaaccaa acgctgccaa gcaaatacga aatcgtgagc agttacggca
    13201 tcaccgtttg accatttagc gtcttggcgt aatttgaacg tccacgtttt gtaatccggt
    13261 gtattttccc aactttctgc cacacccggc tgaatattgc cgtcagaatc tttcgttacc
    13321 aatccttcaa ataactgata agcaacttgc gattccggca cgccctcaat tttatgtgga
    13381 tcaaaacttg atggctcaaa accattatta atcgtaattt cttgtttttc tgcaagcgtt
    13441 gttccttcag gcactttggc tgcaaacaca tttgccgata agcctaacac taatgaggtt
    13501 gttaataagg aaagcgagaa ttttgactgc atatttgatc tccattgatg aatattggct
    13561 tgcaaccagc cgatttgttc taattaattt ttttaagtct aggcattatt attttgattg
    13621 caaggaattt ttttaaaaaa tgtgatagat atcacctttc aatgcaaaaa ttgcataaaa
    13681 aaatcccgaa gaaaatagct ctataaactc tgataatggc tagataactt gc
//
LOCUS       DANLZQ010000075        13563 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.075, whole genome shotgun sequence.
ACCESSION   DANLZQ010000075 DANLZQ010000000
VERSION     DANLZQ010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13563)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13563)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13563
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.075"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            119..913
                     /locus_tag="PXE50_001820"
     CDS             119..913
                     /locus_tag="PXE50_001820"
                     /EC_number="3.5.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HDL5622712.1"
                     /translation="MRLIPLETDHDVSVWAARYIVDRINAFQPTKEKPFVLGLPTGGT
                     PEKTYKELIKLYQAGEVSFKNVVTFNMDEYVGLPKEHPESYHSFMFKHFFDHVDIPLE
                     NINILNGMAEDVNAECERYEEKIRFYGKIHLFMGGVGVDGHIAFNEPASSLSSRTRIK
                     TLTEDTRIANSRFFNNDVSQVPKFALTVGVGTLLDAEEVMILVTGHNKALALQACVEG
                     AVNHLWTISCLQLHRRGIVVCDEPATQELKVKTVKYFKELEKNVAR"
     gene            994..2136
                     /gene="nagA"
                     /locus_tag="PXE50_001821"
     CDS             994..2136
                     /gene="nagA"
                     /locus_tag="PXE50_001821"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HDL5622713.1"
                     /translation="MNHYALTNCVIYTGEQVLYQHALVVKEDKIDSIVLEENLPLDLQ
                     KIDLKGANLSAGFIDLQLNGCGGVMFNEEITTRTLEIMQETNLRSGTTSYLPTFITSP
                     DEGVKQAVAVMREYLSKHKNQALGLHLEGPYLSVAKKGVHRPEFIREISPEMLDFLCD
                     NGDVITKITIAAENPTADHIKRFNDAGIIVSIGHSNATFAQTKQRIAEGAAFATHLHN
                     AMSPVSNGREGGVVGAVLDSDIYTGIICDGLHVEWGNIRIAKKAKGDKLVIVSDAVAA
                     AGSDIESFIFVGKKVTVKDGKCYDEFGALGGAAITMIESIRNVVQHCDISLNEAIRMS
                     TLYPAKAIGVEETLGSLEAGKIANLAIFDNQFEVKATAVNGQLQWH"
     gene            2218..2532
                     /locus_tag="PXE50_001822"
     CDS             2218..2532
                     /locus_tag="PXE50_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2322 family protein"
                     /protein_id="HDL5622714.1"
                     /translation="MQFKDYLATFPTIDHLAGLNVINSGEVIQHIPAIEGKLGSLKLY
                     NALFAKFDGKLTASAAKQGLEWFAEHVEDAKNNVGKHPNIDLLFRVIEQDLSLSLEPI
                     VK"
     gene            complement(2611..3801)
                     /locus_tag="PXE50_001823"
     CDS             complement(2611..3801)
                     /locus_tag="PXE50_001823"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010944663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HDL5622715.1"
                     /translation="MTQAIESVLAELKRGVENIYSEEDLITKLKENRPLRIKLGADPT
                     APDIHLGHTVVLNKLRQFQQFGHEVYFLIGDFTGMVGDPSGKNSTRPPLSREDVLRNA
                     ETYKEQIFKILDPQKTKIVFNSEWLGKLGTEGMIRLASNYTVARMLEREDFKNRFTNQ
                     QPIAIHEFIYPLLQGHDSVELKADVELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPL
                     LVGLDGEKKMSKSLGNYIGVTEAPSEMFGKIMSISDDLMWDWYNLLSFRPLDEIAQLK
                     ADVENGKNPRDVKILLAKEIIARFHDEAAADAAEQEFINRFQKGAIPDEVPEFTFEGE
                     IGLAALLKEAGLVPSTSEAIRSAQQGGVKIDGEKVEDVKQTAQKGTFVYQVGKRKFAR
                     ITVK"
     gene            complement(4164..5468)
                     /locus_tag="PXE50_001824"
     CDS             complement(4164..5468)
                     /locus_tag="PXE50_001824"
                     /EC_number="7.2.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium ion-translocating decarboxylase subunit
                     beta"
                     /protein_id="HDL5622716.1"
                     /translation="MESIIALFKGMGLMHLELGQAIMIVISLVLLWLAIARKFEPLLL
                     LPIGFGGLMSNIPEAGMAMTALDNLLHSGSAEQLAIIAAKVNSTSLDLHSIKDAIALA
                     APSVQNELEVMAGDMGYTAGVLALFYKVAIGYGVAPLIIFMGVGAMTDFGPLLANPRM
                     LMLGAAAQFGIFATVLGALGLNWLGIIDFTLPQAAAIGIIGGADGPTAIYLASKLAPE
                     LLGAIAVAAYSYMALVPLIQPPIMKALTTEQERKIRMVQLRNVSNREKIIFPIVLLLL
                     VALLLPDAAPLLGMFCFGNLLRTSGVVERLNDTAQNALINIVTIFLGLSVGAKLVADK
                     FLQPQTLGILVLGVIAFGIGTASGVIMAKIMNRFSQHKINPLIGSAGVSAVPMAARVS
                     NKVGQEYDKQNFLLMHAMGPNVAGVIGSAIAAGVMLKYISTM"
     gene            complement(5478..7304)
                     /gene="oadA"
                     /locus_tag="PXE50_001825"
     CDS             complement(5478..7304)
                     /gene="oadA"
                     /locus_tag="PXE50_001825"
                     /EC_number="7.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-extruding oxaloacetate decarboxylase
                     subunit alpha"
                     /protein_id="HDL5622717.1"
                     /translation="MTTQPKKIAITDVVLRDAHQSLFATRLRLDDMLPIASELDNIGY
                     WSLETWGGATFDSCIRFLGEDPWVRLRELKKAMPKTPMQMLLRGQNLLGYRHYADDVV
                     DKFVERSVANGMSVFRVFDALNDPRNMQAALQAVKKHGGHAQGTLSYTTSPVHTLQTW
                     LDVTEQLLEIGVDSLVIKDMSGILTPMAAYELVSEIKKRYDVELHLHCHSTTGMAEMA
                     LLKAIEAGVDGVDTSISSMSGTYGHPATESIVATLQGTPYETGLSIPALEKISAYFRN
                     VRKKYAKFEGQLRGIDSRILVAQVPGGMLTNLESQLKQQNASDKLDLVLQEIPRVRED
                     LGNIPLVTPTSQIVGTQAVMNVLMGERYKTIAKETAGILKGEYGRTPAPVNKALQDRV
                     LEGAEPITDRPADHLPPELEKLVAEVTASAKEKGITLSENMIDDVLIVALFQQVGWKY
                     LENRNNPSAFEPVPSADEAKPAQASAASAPKAQTQSGSAIYTVELEGKAFVVKVSEGG
                     DITNIAPTPATPAPQAVDSAPKSANTLSANAEPVNAPMAGNILKVEVKEGQQVAEGDV
                     LLILEAMKMETQICAAKSGTIQGINVKQGDVVAVNDTLMSIA"
     gene            complement(7344..7598)
                     /locus_tag="PXE50_001826"
     CDS             complement(7344..7598)
                     /locus_tag="PXE50_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxaloacetate decarboxylase subunit gamma"
                     /protein_id="HDL5622718.1"
                     /translation="MAPAELFAEGINLMVAGMGFVMLFLLVLIYAISFISKIINQYFP
                     EPVSIPASKTVPQSPPDDLERLRPVIAAAIAHHRRINGQH"
     gene            complement(7788..8975)
                     /locus_tag="PXE50_001827"
     CDS             complement(7788..8975)
                     /locus_tag="PXE50_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HDL5622719.1"
                     /translation="MSNNNRSALLGAAFLMATSAIGPGFLTQTATFTQTLLASFGFVI
                     LLSILLDIGAQLNIWRIVAVSEKKAQDIANAVLPGAGYFLALLIVMGGLAFNIGNVGG
                     AGLGLNILTGLSPEMGAVVSGAIAVGVFLFHEAGKVMDRFAQIMGFVMIALTIFVAVK
                     ANLPIDDAVVHTFVPEKLDVIAIVTLVGGTVGGYITFAGAHRLLDAGIKGKENLKEVS
                     KSSVSAILIASIMRVVLFLAVLGVVSMGVQLDPKNPAATPFAHVAGDVGLMIFGVVIW
                     AASITSVIGAAYTSVSFITSFSPFIEKHKNCFIVAFIVVSTAVLATIGRPAQVLVFVG
                     TLNGLILPISLGLILLAAHKTKIVGDYKHPVWMTVSGAIVVILMAVLSAMTLSKYISG
                     LMA"
     gene            complement(9250..9987)
                     /gene="pxpA"
                     /locus_tag="PXE50_001828"
     CDS             complement(9250..9987)
                     /gene="pxpA"
                     /locus_tag="PXE50_001828"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HDL5622720.1"
                     /translation="MNHVDLNVDLAEGCGNDHSLLQLVTSANVCCGLHAGDYNEMRKA
                     INWAKENSVRVGAHPSFPDRENFGRTNMQLPDDELKACLLYQLGAAKALCDAENMPMS
                     YVKPHGALYNMAAKDPHLATLIANTVKQFDPNLKLMGLSGSLMLSIAEQHGLETISEV
                     FADRHYLADGSLVPRTRDDAMVESDDEAISQVLQMVLDGTVPTVDGGNVAIKADSICL
                     HGDGEHAVVFAERIKKELQAKGILVKA"
     gene            complement(9974..10887)
                     /locus_tag="PXE50_001829"
                     /pseudo
     CDS             complement(9974..10887)
                     /locus_tag="PXE50_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250478.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
     gene            complement(10884..11531)
                     /gene="pxpB"
                     /locus_tag="PXE50_001830"
     CDS             complement(10884..11531)
                     /gene="pxpB"
                     /locus_tag="PXE50_001830"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HDL5622721.1"
                     /translation="MLTIHHTSEHSLLCLAEPPAELAKQQQIWRVAEQARALDGVLEV
                     VVGMNNFTLFHAIGTDSTRLIQAVQQLWENDQAQAAQSPRLIEIPVHYGGEFGEDLFE
                     VAQFHNTTPEEIIRRHTEPTYTVFMIGFQPGFPYLNGLPQNLHTPRRNVPRTKVPAGS
                     VGIGGRQTGIYPFTSPGGWQLLGRTELPLFDIQHNPPTLLTAGDNVRFVAESITL"
     gene            complement(11625..12449)
                     /locus_tag="PXE50_001831"
     CDS             complement(11625..12449)
                     /locus_tag="PXE50_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HDL5622722.1"
                     /translation="MKKLLLFLLFIGNPIFAKSPELMLVEQYQDQDISGWVMSEKLDG
                     VRGFWDGQQLISRQGYPLNPPDYFIQDFPPFAIDGELFSERGKFEEISSIVRSAQPKG
                     WHKLKLQVFDVPNAQGNLIERLATLENYLKQHPTLHIAIIEQIPIKDKAHLQQFYQSV
                     LEQGGEGVIVRNPNAGYIQGRSAQILKIKPVLDEECTVVAHHKGKGKYTDKLGAITCE
                     NQRGRFRIGSGFKDKERENPPPIGSIITYKYRGVTESGKPRFATFWRIRNDQISEN"
     gene            complement(12583..13407)
                     /locus_tag="PXE50_001832"
     CDS             complement(12583..13407)
                     /locus_tag="PXE50_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622723.1"
                     /translation="MEHFIGLGVAGNFAGHLEQAGEEADFAKVKTVEAVQPKAIFPFY
                     VPAENLGDYQFLSTYPLSNTAINFPSDADNLQIEPEVALICEIGYQDQQVVSLTPTHF
                     AAYNDCSIRRPNANKICEKKNWGASSKGLSAIHLPLDNFNKGGTLDNYNIACFHKRNG
                     ELNTYGIDSPAVEYSYFHQKLLDWIVERMNNQPDEGPMNNISEMLKQANYPTKAIISI
                     GATRYTPFGESNLLQVGDVSMVVVYNVKKYSHSQIEEMAKLETFSEDISALIQTVR"
BASE COUNT         3721 a         2997 c         3041 g         3804 t
ORIGIN      
        1 taaattttct gtgatcagga tcacaaaaat agcagaaaaa atagaaattg aagttgtatt
       61 tcattaaaat aataaaaaat gaagtgattt attcagaatt gatatttaag gagagactat
      121 gcgtttaatt ccgttagaaa ctgatcacga tgtgagtgtt tgggctgctc gttatattgt
      181 tgatcgtatc aatgcattcc aaccaaccaa agaaaaacct tttgtgcttg gcttaccaac
      241 cggcggtacg cctgaaaaaa cctataaaga attaattaaa ttatatcaag ctggtgaagt
      301 gagctttaaa aatgtggtga ctttcaatat ggacgaatac gtcggcttac ctaaggaaca
      361 ccctgaaagc taccacagtt ttatgttcaa gcactttttt gaccacgttg atattccgct
      421 tgagaatatc aatatcctca acggtatggc ggaagacgtg aatgcagaat gcgaacgtta
      481 tgaagaaaaa atccgttttt atggtaaaat ccatctgttt atgggcgggg tcggtgtgga
      541 tgggcatatt gcgtttaatg agcctgcatc ttcgctttct tcccgcactc gaattaaaac
      601 gcttaccgaa gatactcgca ttgcaaactc acgtttcttt aacaatgacg taagccaagt
      661 gccgaaattt gctttaaccg ttggggttgg tacgttgctt gatgccgaag aagtgatgat
      721 cttagtgacc ggccataaca aagccttagc attacaggcg tgtgtggaag gggcggtaaa
      781 tcatctttgg accatcagtt gcttacaatt acatcgccgt ggtatagtgg tgtgtgatga
      841 gccggcaacc caagagctga aagttaaaac agttaagtat ttcaaagagt tagagaaaaa
      901 cgtagctcgc taattctgat tttacaagcg gttaattttg taatattttt tacaaaaacg
      961 accgcctgtt agcatttaaa gagaagagag aaaatgaacc attatgcctt aacaaactgt
     1021 gtgatttaca ccggtgaaca agtgctttac caacacgcat tagtggtgaa agaagataaa
     1081 atcgactcca ttgttttgga agaaaattta ccgctggatc tgcaaaaaat cgacctaaaa
     1141 ggagcgaatc tttcagccgg ttttattgac ttgcaactga acggctgcgg tggggtgatg
     1201 tttaatgaag aaatcactac ccgcacttta gaaattatgc aggaaaccaa tctgcgttca
     1261 ggcacaacca gctatttacc gacttttatt acctcgcctg atgagggagt gaaacaagcg
     1321 gtggcggtaa tgcgtgagta tttgtcgaaa cacaaaaacc aagcactcgg cttgcatttg
     1381 gaaggacctt atctaagtgt ggcaaagaaa ggagtacacc gtccggaatt tatccgtgaa
     1441 atcagccctg aaatgttaga tttcttatgc gataacggcg atgtaattac gaaaatcacg
     1501 attgcagcag aaaacccgac cgcagaccat atcaaacgct ttaatgatgc aggaattatt
     1561 gtatctatcg ggcattccaa tgccactttt gctcaaacca aacagcgaat tgccgaaggg
     1621 gcagcgtttg ctacgcattt acacaatgca atgtcgccgg tcagcaacgg gcgtgaaggc
     1681 ggtgtagtag gggcggtgtt ggatagcgat atttacaccg gcattatttg cgatggcttg
     1741 cacgttgaat ggggcaacat tcgcattgcc aaaaaagcca aaggcgataa attagtgatt
     1801 gtcagcgatg ctgttgctgc cgcaggaagt gatattgagt cgtttatttt tgtcggtaaa
     1861 aaagtcacgg tgaaagatgg caaatgctac gatgaattcg gagcattggg cggtgcggca
     1921 atcacgatga tcgaatccat tcgcaacgta gtgcaacatt gcgatattag cctgaatgaa
     1981 gcaatccgaa tgagtaccct ttacccggca aaagcgattg gggtagagga aacactcggc
     2041 tcacttgaag ccggcaaaat tgccaacctt gcgattttcg ataatcaatt tgaagtaaaa
     2101 gcgactgctg taaacgggca attacagtgg cattaatttt gctacaaatt ctaagcataa
     2161 cagcatataa tccaaaggca ggcattgtgt ctgcctttta tttataggga gaataacatg
     2221 caatttaaag attacttagc cacttttcca actattgatc atctagccgg cttaaacgtg
     2281 ataaatagcg gtgaagtgat tcaacatatt cctgcgattg aaggtaaatt aggttcacta
     2341 aaactttaca atgcactgtt tgcgaaattt gatgggaaat taaccgctag tgcagcaaaa
     2401 caagggttgg aatggtttgc cgaacacgtt gaagatgcga aaaataatgt gggtaagcac
     2461 ccgaatattg atctattatt tagggtaatt gagcaagatt tatctttaag tttagagccg
     2521 attgttaaat aagattgcac tagtgaaaaa taacaagcgg tcattatctg caaaattttt
     2581 gcaaataatg actgcttgtg tttaagaggc ttatttcacg gtaatgcgtg caaatttgcg
     2641 tttgccgact tggtaaacaa aagtgccttt ttgagcagtt tgtttcacat cttccacttt
     2701 ttcaccatca attttaaccc cgccttgttg ggctgagcga attgcctctg aagtggacgg
     2761 tactaagccg gcttctttca gtagagccgc taggccgatt tcaccctcaa aggtaaattc
     2821 aggcacttca tcaggaattg cccctttttg gaaacggttg ataaactctt gctctgctgc
     2881 atctgctgcc gcttcatcgt ggaaacgagc gataatttct tttgccagta gaattttcac
     2941 atcacgcggg tttttgccat tttcaacatc cgcttttaat tgtgcaattt cgtctaatgg
     3001 acggaatgag agcaggttgt accaatccca cattaaatcg tctgaaatcg acataatttt
     3061 gccgaacatt tcgcttggag cttcagttac accaatgtag ttgccgagag atttcgacat
     3121 ttttttctcg ccgtctaagc cgacaagtag tgggagtgtc attgccactt gtggtttttg
     3181 accggctgat ttttgtaact cacgtccaac taacaagtta aaggtttggt ctgtaccacc
     3241 taattccacg tcagctttca gttctaccga gtcgtgacct tgtagtagcg gataaataaa
     3301 ttcgtggatt gcgatcggtt gttggttcgt gaaacggttt ttgaaatctt cacgttctaa
     3361 cattcgagca acggtgtagt tggaggctaa gcggatcata ccttccgtac ctaacttgcc
     3421 taaccattcg gagttgaata cgatcttggt tttttgtgga tctaaaattt tgaagatctg
     3481 ctctttatag gtttcggcat tgcgtaacac gtcttcacgg ctaagtggcg gacgggtaga
     3541 gttttttcct gatggatcgc ctaccatacc ggtgaaatca ccgattaaga aatagacttc
     3601 gtgtccgaat tgttggaatt gacgaagttt gttcagcaca acagtatgac ctaagtgaat
     3661 atccggtgca gttgggtctg cccctaattt aatacgcaat gggcggtttt cttttaattt
     3721 ggtgattaaa tcttcttctg aataaatatt ttccacgcca cgtttaagtt cggcaaggac
     3781 tgattcgata gcttgagtca tttatcttcc ttttagtctt gaatataaaa aatggatcta
     3841 ttatagcggt atgaattgaa attgataggc tataggcgaa aaaaaacgcc gtattttgtg
     3901 ggggaatacg gcgtaaagag ttggagtgat tacctattat ttttgaagtg atttaatgat
     3961 aatgattatc atctgttaag tcaatacttt ttttgaaaat tttcaataag aattattctc
     4021 atcaattaag taagatggat actacggcaa ttagtgaaga atgtacagcg gaattttcgt
     4081 attgtaagag tgttggtaag cggtattttt agaaaaaacc tccgagagcg gttatttttc
     4141 ggaggttttt tgcaaatgag gatttacatc gttgaaatgt atttcaacat cacccccgct
     4201 gcaatcgcag agccaatcac gccggcaacg tttgggccca ttgcgtgcat taacaagaag
     4261 ttttgtttat cgtactcttg tccgactttg tttgataccc gtgcagccat cggcacggca
     4321 gaaacacccg ctgagccgat aagtgggttg attttgtgct gactaaagcg gttcattatt
     4381 ttcgccataa tcacaccgct tgcagtgccg atcccaaagg caatcacgcc caatactaaa
     4441 atgcctagtg tttgcggttg taagaatttg tctgcgacca attttgcccc caccgataac
     4501 cctaagaaaa tcgtcacgat attgattaac gcattttggg cggtgtcgtt taagcgttct
     4561 actacgccac tggttcgcag taagttgcca aagcagaaca ttcccaataa cggtgcagca
     4621 tccggcagta agagtgccac taataatagc aacacgatag ggaaaataat tttctcacgg
     4681 ttgcttacat tacggagctg aaccattcgg attttacgtt cttgctcggt ggttaaggct
     4741 ttcataatcg gcggctgaat cagtggcact aacgccatat aagaataagc cgctaccgca
     4801 atcgcaccta ataattcagg ggcaagtttg ctggcaagat aaatcgcggt cgggccatct
     4861 gccccgccga taatcccaat cgcagcggct tgtggcaatg tgaagtcgat aatgcctaac
     4921 cagtttagcc ctaatgcacc cagtacggta gcaaaaatcc caaattgagc cgcagcccca
     4981 agcattaaca ttcgagggtt ggcaagtaaa gggccgaaat cagtcatcgc cccgacaccc
     5041 ataaagataa taagcggagc aacgccgtag ccgatagcaa ctttatagaa taatgccaac
     5101 acaccggcgg tatagcccat atcgccagcc attacttcaa gctcattttg aacagaggga
     5161 gcagccagtg cgatggcatc tttaatcgaa tgcagatcaa ggcttgtact atttacctta
     5221 gcagcaataa ttgccagttg ctcggcagaa ccgctgtgga gtaaattgtc taatgccgtc
     5281 attgccatac ctgcttccgg aatgtttgac atcaaaccac caaagccaat aggcagtagt
     5341 aaaagcggtt cgaattttcg ggcgatggca agccaaagca acactaaact gatgacaatc
     5401 ataatcgctt gccccagttc taaatgcatt agccccatac ctttaaaaag tgcaataata
     5461 ctttccatac cggactccta ggcaatactc attaaagtat catttaccgc cacaacatcg
     5521 ccttgtttga cattaatgcc ttgaatcgtg ccggattttg ccgcacaaat ttgggtttcc
     5581 attttcattg cttcaagaat cagtaacaca tcgccttcag caacttgttg cccctctttc
     5641 acttccactt tcaaaatgtt ccctgccatt ggagcattca ccggttcggc attggctgat
     5701 agcgtatttg cagattttgg tgcagaatcg accgcttgcg gagccggtgt tgctggtgtt
     5761 ggagcgatat tggttatatc gccaccttca ctcaccttca ccacaaaggc tttgccttca
     5821 agctcaacgg tataaatggc tgaaccggat tgtgtttggg cttttggtgc agaagcagcg
     5881 gaggcttgtg ccggttttgc ttcatcagca cttggcactg gctcaaaggc agacggatta
     5941 ttgcggtttt ccaaatattt ccagcccact tgttggaaga gtgccacaat caatacatca
     6001 tcaatcatgt tttcagatag cgtaatgcct ttttcttttg cacttgcagt cacttctgcc
     6061 actaattttt ccagttccgg cggaagatga tcggctgggc ggtcggtaat cggctctgct
     6121 ccctcaagca ctctgtcttg caaggctttg tttaccggtg ccggtgtgcg accatattcg
     6181 ccttttaaaa tacctgcagt ttctttggcg atagttttat aacgttcgcc cattaatacg
     6241 ttcatcaccg cttgtgtgcc gacaatttgt gaggttggtg tcaccaacgg aatattgcct
     6301 aaatcttcac gcacacgagg aatttcttgt aaaaccaagt ctaatttatc cgacgcattt
     6361 tgttgcttga gttggctttc gaggttggtc agcatgccac ccggcacttg ggcaaccaaa
     6421 atacggctat ctataccacg gagctgtcct tcaaattttg catatttttt acgcacgtta
     6481 cggaagtagg cagagatttt ctccagagct ggaatgctca agccggtttc atacggcgtg
     6541 ccttgaagtg tggcgacaat agactcggtt gccgggtgac cgtaagtgcc ggacattgat
     6601 gaaatggagg tatcgacacc atcgacaccg gcttcaatcg ctttgagcaa cgccatttca
     6661 gccataccgg tggttgaatg gcaatggaga tgtagctcaa cgtcgtagcg ttttttaatt
     6721 tcgctgacta attcataggc tgccattggg gttaaaatgc ccgacatatc tttgatcacc
     6781 aacgaatcca cgccaatttc caataattgc tcggttacat ccaaccacgt ttgtagggta
     6841 tgaacagggc tggtggtgta actcaaagta ccttgtgcgt gcccgccgtg ttttttgacc
     6901 gcttgtaatg cggcttgcat attgcgaggg tcgttgaggg catcaaatac acggaacaca
     6961 ctcataccgt ttgccaccga acgctcgaca aatttatcta ccacatcgtc ggcataatga
     7021 cgataaccca ataagttttg cccacgtagc agcatttgca ttggggtttt cggcattgct
     7081 tttttcagct cacgtaaacg cacccacgga tcttcgccta aaaaacgaat acaactgtca
     7141 aaagttgccc cgccccaagt ttctaacgac caatagccga tattatccag ctcggaggca
     7201 atcggtaaca tatcgtctaa gcgtaaacga gtcgcaaaaa gggattggtg tgcatcacgc
     7261 aaaaccacat cggtaatcgc aatttttttc ggttgagttg tcataatcaa attccttcta
     7321 attattttat ttttgaaatc ttgttaatgt tgcccgttaa ttcgacgatg atgagcaatc
     7381 gcagcggcaa tcacagggcg taaacgctct aaatcatctg ggggagattg aggcacagtt
     7441 ttagaggctg gaatagaaac aggttcgggg aaatattgat tgataatctt ggaaataaag
     7501 ctgatggcat aaattaaaac cagcaggaac agcataacaa atcccattcc ggctaccatt
     7561 aaatttatac cttccgcaaa gagttctgca ggtgccataa tttatcctta aaatgtagaa
     7621 atgatgaaga aaatgtagaa aaaattcaga tttatttcaa attatttagc ctcaaaatga
     7681 gtggtagatc acaaacttta aacgcaagcg gtcagatttt acaaattttt tacaagagta
     7741 gttaaaattt gcaaaacctg accttaggtt agcttgaagc taagtcgtta tgccattagc
     7801 cccgaaatat attttgaaag ggtcattgca cttagcaccg ccattagaat caccacaatc
     7861 gcccctgaaa cggtcatcca cacagggtgt ttgtagtcgc ccacaatctt ggttttgtga
     7921 gctgccagca gaattaaccc gagggaaatc ggtagaatta agccgttaag cgtccctaca
     7981 aacaccaaga cttgtgccgg tctgccgatg gttgccagca cggcggttga aaccacaata
     8041 aaggcgacaa tgaaacagtt tttgtgtttt tcgataaatg gcgagaatga agtaatgaag
     8101 gaaaccgagg tataagccgc cccaatcaca gaggtaatgg aggctgccca aatcaccacg
     8161 ccgaagatca tcaaaccgac atcgccggca acgtgggcaa atggggtagc cgcagggttt
     8221 ttcggatcaa gttgcacgcc cattgacacc acgcccagca ccgctaaaaa cagtaccaca
     8281 cgcataattg aggcgattaa aatggctgac accgagcttt tgctcacctc ttttaaattc
     8341 tctttgcctt taatgcctgc atcaagcaaa cggtgcgcac cagcaaaggt gatgtatcca
     8401 ccaacagttc cgcccactag cgtgacaatc gcaatcacgt ctaatttttc cggcacaaag
     8461 gtatgcacca ccgcatcgtc gattggcaga ttggctttta cggcaacgaa gatggttaaa
     8521 gcaatcatca caaagcccat aatttgtgca aatctgtcca tcactttacc agcttcatgg
     8581 aacaggaaca cgcccacggc aatcgcaccg ctgaccaccg cacccatttc aggggaaagt
     8641 ccggtgagaa tgtttagccc taaacctgca ccgcccacgt tgccgatatt aaaggctaaa
     8701 ccgcccatca cgataagcag agccagaaag taacctgccc ccggcaatac ggcattggcg
     8761 atgtcttgag ctttcttttc cgatactgct acaattcgcc aaatattcag ttgagcaccg
     8821 atatcaagca agatcgagag taagatcaca aagccgaagc tggcaagtag ggtttgggtg
     8881 aaggtggctg tttgggttaa gaaccccggc ccgatggcgg aggtcgccat taaaaatgct
     8941 gccccgagta gggcgctacg gttgttgttt gacattgtgt tggttccttt tttgttgtta
     9001 atgagtcatt attcgtggat ttatcatggt aatattcccc tctttagcaa agaggggtta
     9061 ggggagattt ggcagtagaa ctcatcgaag tgagagagtt aataatgctc aatttaacct
     9121 cttgaaatta cttattttct ccgtaaatcg cttctgtcaa atctccccca gcccctcttt
     9181 tctaaagagg ggagttcgat ctccaagagt tttatttctg gttttccgtc cattttgact
     9241 aaaacaggat caggctttca ccaaaatccc ctttgcctgt aactcttttt taattcgctc
     9301 ggcaaatacc acggcgtgtt cgccgtcacc gtgtaagcaa atgctgtcgg ctttaatcgc
     9361 cacattacca ccatcaacgg ttggtacagt gccgtctaac accatttgca agacttggct
     9421 gatcgcttca tcatcgcttt ctaccattgc atcatcacgg gtgcgaggca cgagcgagcc
     9481 gtcagctaaa tagtggcggt cggcaaagac ttcggaaatg gtttccaaac cgtgctgctc
     9541 ggcaatgctc aacatcaggc tgccggataa gcccatcagt ttgaggttgg gatcgaactg
     9601 tttgaccgta ttggcgataa gggtggcaag gtgagggtct ttggcggcca tattgtataa
     9661 agcgccgtgc ggtttaacgt agctcatcgg catattttcc gcatcacata aggctttggc
     9721 ggctcccagt tggtagagca gacaggcttt aagttcatca tcgggcagtt gcatattggt
     9781 acgcccaaag ttttccctat ctggaaaact cgggtgagcg ccaactcgca cgctgttttc
     9841 cttcgcccag ttaatcgctt tacgcatttc attgtaatca ccggcgtgca agccacagca
     9901 gacattcgcc gaagtaacga gctgtaataa tgaatgatcg ttgccacaac cttcggcaag
     9961 atcgacattt aaatcaacgt gattcattcg cttttctccg aattgtttcc aaataatttt
    10021 gatctttttg ataaatttcg accgcttgtt cacggcttac ttgctcaaat tgcaccgttg
    10081 agccgaacgg attttgtgcc aaccgcccga gatcggcctg aataatgcag gcaattttcg
    10141 gataaccacc ggtggtttgg gcatctgcca tcagcacaat cggctggccg tccggcggca
    10201 cttgcaccgt accactcggg gctgcgtagg agagcatttc aagggaagcg gtcaattcca
    10261 acgctttttc tgcaaaacgg tagcccatac ggttgctgtt gttttgcagt tgccaccctt
    10321 gttgccaaaa gcgttcacgg ctatctgcgg taaaggcttc atattcgctc gaagcggttg
    10381 cccgaatgcg tgaggtgaaa tcaatcggct caatcgacat caaagaaagt cggctgtctc
    10441 tgcggcctgt ggcgatgtta tcgccggctt ttaacattct gccttgaaaa ccgccaaatt
    10501 gagctttgag agcggtactt gccgaaccta acacctgcgg caccagaaaa ccgcctgcca
    10561 cgcataaata ggcgtaattg ccgagaacaa tccgttttat cgtcagcgtt tgacgggcgt
    10621 tggcagtgta gcggtaatag gaaaaaaccg gcgtgccgtc cagctccgcc tccaccaatg
    10681 caccggtgag gcaaaatggc gtgtcgcaat cacgccaagg gtaagttcaa tcgcaggtgc
    10741 attatttgca ttttttaaca ataaattacc cgcttgtaag gcaaggctgt ccatcgcacc
    10801 gccgtggctc acgcctaaat ggcgataacc ataacgccct aaatcttgaa tgtgggcaaa
    10861 accctgtatt atttcgatat aaatcatagc gttatactct ccgccacaaa tctaacatta
    10921 tcgccggctg taagtagcgt tggcggattg tgttgaatat caaacaacgg taactcggtt
    10981 cgtcctaaca gttgccagcc acctggtgag gtaaagggat aaatgcctgt ttgcctgccg
    11041 ccgatgccga ccgaaccggc agggactttg gtgcgaggca cgtttcggcg tggggtgtgt
    11101 aaattttgcg gtaagccgtt gaggtaagga aagccgggtt gaaagccgat cataaacacg
    11161 gtgtaagtcg gttcggtatg acggcggata atctcttcgg gagtggtatt gtggaattgg
    11221 gcgacttcaa acagatcttc gccaaattca ccgccgtaat ggacagggat ttcaatcagg
    11281 cgtggggatt gtgcggcttg ggcttggtcg ttttcccaga gttgttgaac cgcttggata
    11341 aggcgtgtgc tatcggtgcc aatggcgtga aatagggtaa aattgttcat tcctaccacc
    11401 acttccaaca cgccatctaa ggctcttgcc tgttctgcca cccgccaaat ctgttgctgt
    11461 ttggcaagct ctgcaggcgg ttcggctaag cagagcaggg aatgttcgct ggtatgatga
    11521 atcgtcagca taattgccct caaattgtta caaaaaggta acaacttttt acgctgatat
    11581 atccagactg tcaattttat tttgttgaaa atgtgaaata gctcttaatt ttcagaaatt
    11641 tgatcatttc ttattcgcca aaacgttgca aatctgggct tgcctgattc tgtgacacct
    11701 cgatatttat aggtaatgat tgagccaatc ggtggcggat tttctcgttc tttatcttta
    11761 aaaccgctgc caatccgaaa acgtccacgt tgattttcac aagtgattgc cccgagttta
    11821 tcggtatatt tccctttgcc tttatgatgg gcaaccacag tgcattcctc atctaaaacc
    11881 ggtttgattt tcaaaatttg ggcagaacga ccttgaatat agcctgcatt cgggttgcga
    11941 acgataaccc cttcgccacc ttgttccagc acagattggt aaaattgttg aaggtgggct
    12001 ttatctttaa tcggaatttg ctcaataata gcgatatgga gcgttggatg ttgcttcaga
    12061 taattctcta aggtcgccag ccgttcaatc aaattccctt gtgcatttgg cacatcgaac
    12121 acctgtaatt tcagcttgtg ccaacctttg ggctgagcgg aacgcacaat gcttgaaatt
    12181 tcctcaaatt tgccccgttc gctaaacagt tcgccgtcaa tcgcaaaagg agggaaatct
    12241 tgaataaaat agtcgggtgg attgagcgga taaccttggc ggctgatgag ctgttgaccg
    12301 tcccaaaagc ctcgcacgcc atcgagtttt tctgacatta cccagccact gatgtcttga
    12361 tcttgatatt gctcaacgag cattaactcg ggcgatttgg caaaaatagg gttaccaatg
    12421 aagagtagga ataagagcag ttttttcata gtctctccga aatagtgcct ccgaatatgc
    12481 aaggcactat aaaggaaagc gtgcaaacag tcagaaatga atctcaattt ttcgacgcag
    12541 atcgcaaaat tttccgaaaa actgatcgct tgagtgagaa atttaacgta ctgtttgaat
    12601 taaagcagaa atatcctcgc taaaggtttc caacttcgcc atttcttcaa tttggctatg
    12661 agaatatttc ttcacattgt aaacgaccac catacttaca tcacctactt gcaataaatt
    12721 actttcgcca aaaggcgtgt agcgtgttgc cccaatgctg ataatcgctt tagttgggta
    12781 gtttgcctgt tttaacattt cggaaatgtt gttcatcgga ccttcatcgg gctgattatt
    12841 cattctctct acaatccaat cgagcaattt ttgatggaaa tagctgtact ccaccgcagg
    12901 gctgtcgatg ccgtaggtat tcagctcgcc attacgttta tggaaacaag cgatgttgta
    12961 attatccagc gtgccgcctt tgttgaagtt atctaacgga agatgaattg ccgaaagccc
    13021 tttagacgaa gccccccagt ttttcttttc acagatttta ttcgcattcg gacggcggat
    13081 agagcagtca ttgtaagccg caaaatgggt tggcgtgagc gaaaccactt gctgatcttg
    13141 gtagccaatt tcacaaatta acgccacttc aggctcaatt tgcagattat cagcatcact
    13201 cgggaaatta atcgcagtat ttgaaagcgg ataggtggat aaaaactgat aatcccccaa
    13261 attttccgcc ggcacataaa acgggaaaat cgcctttggc tgcactgctt ccactgtttt
    13321 cactttcgca aaatccgcct cctctccggc ttgttctaaa tgtccagcaa aattgccggc
    13381 cacgcctaaa ccgataaagt gttccataat ctactcctta attggtaaaa gttggataaa
    13441 attttaccgc ttgtaaccaa aaattgcgaa tgtttatttt gatctgattg atagaaaatt
    13501 attgaattga gattaaattt agccatattt tgaacataaa attagcgctt tgttataaaa
    13561 aca
//
LOCUS       DANLZQ010000076        13488 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.076, whole genome shotgun sequence.
ACCESSION   DANLZQ010000076 DANLZQ010000000
VERSION     DANLZQ010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13488)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13488)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13488
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.076"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            219..1679
                     /gene="xseA"
                     /locus_tag="PXE50_001833"
     CDS             219..1679
                     /gene="xseA"
                     /locus_tag="PXE50_001833"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HDL5622724.1"
                     /translation="MSNILTVTQLNYSVRHLLEMEMSHIWLTGEISNFSQPVSGHWYL
                     TLKDDKAQVRCAMFKMKNVRVNFRPQNGMQVLVRASVTLYEPRGDYQLIIESMQPAGE
                     GLLQQQFEQLKAKLSAQGLFAQEHKKPIPTFVKTVGIITSSSGAALQDILHILQRRDP
                     SLSVVIYPALVQGKEATQDIVNMIELANRRNECDVLIVGRGGGSLEDLWCFNEESVAY
                     AIYHSQIPIISAVGHETDVTIADFVADLRAPTPSAAAELVSRDQNELKRQLQHQFDKV
                     NLAFDRVWNHKFNRFQQLPLRLNAQHPSKQIQSQQQRFDYMEYRLEQAIYALVAAKKQ
                     VGKELNVRLIHQHPQKQIERQSQMLKQLELKLHWQMEQQLSKKQQKWKNITQRFERNP
                     LPYQLYQQQTMVAKMSQRLAYSIEKIMLKEQRHFQELCTKLDGLSPLKILTRGYSITQ
                     TKDGKTLTSTENIERGEAIITQLKTGKIISQVVDFL"
     gene            1991..2076
                     /locus_tag="PXE50_001834"
     tRNA            1991..2076
                     /locus_tag="PXE50_001834"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2025..2027,aa:Leu,seq:caa)
     gene            2170..2994
                     /locus_tag="PXE50_001835"
     CDS             2170..2994
                     /locus_tag="PXE50_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HDL5622725.1"
                     /translation="MKPLQNGTNKPFTITIASTKGGSAKSTNAANIGAFCAEHGLRTL
                     LIDTDTQPTLSSYYELEYQAPGGTYEFLHFKDVDPTHIISRTAIPNLDLIQSNDPSNK
                     ISPMLRDSPDGALRFSLLLQKIEGYDVIIIDTRGTRDITVDMSVLAADVLFCPILPHI
                     LSAKEFIRGTIGMYQDLETFTAFGFTLPPLKAMINCVDHTKDVKLVSDYLHTLFQNEF
                     DENKTLLEFSVPDRVAYREAATFSKPVYRQSQAEYETIRQLCALLMPQFAQSHFSE"
     gene            3006..4370
                     /gene="dnaB"
                     /locus_tag="PXE50_001836"
     CDS             3006..4370
                     /gene="dnaB"
                     /locus_tag="PXE50_001836"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HDL5622726.1"
                     /translation="MSNPNKPTTHLYSAEAEAAVIGGLLLDNTLFDDVIGKINSADFY
                     FGVHQALFKGITDLIEVGKPADILTLDEYLKQKNLLKEIGGFAYLAEVSKNTPSAANV
                     GAYADVVLLHSKHRQLLKLGQFIVDQTQTVKTPEKLESVIDEVEKKMTEFSLSDNTKS
                     ATDLSDIFASMLSRMELSAKNGDPVTGTPTGIQGIDEATTGGQPGDLIVIGARPSMGK
                     TAFSQTIAYHTLEKFESAPVFYHSMEMPADQILQRFLAMRARVGLQNIRQADRLDDEE
                     WAKLTAAMGYILEHWKNRLVIDDEGSLTPQKLRTKVRQNARKYGKPSAIFIDYIQLMQ
                     TSQRYENRNLEIANISRSLKLLAKEMDCPVYALSQLNRSLEQRANKRPINSDLRESGS
                     LEQDADVILFIYRDEIYDEDSAFKGTAEIIIGKQRNGPLTSVMTNFRSEFALFENRAS
                     TASH"
     gene            4379..6028
                     /locus_tag="PXE50_001837"
     CDS             4379..6028
                     /locus_tag="PXE50_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HDL5622727.1"
                     /translation="MTKDEKRLAAIAKGLNVSPISNTAPSYQTATPAHYSSDEEYITV
                     TLDKLRPYEHNPRKTRNPNFEMIKESIRRRGLDHKPNITRRPGEDFYIIADGGNTRIQ
                     ALKELFTETKDPKFWSISCQYKPWQGDTADSVEAELNLLIGHLIENDTRADLSFIEKA
                     LGILQAKEYYEKKLNKSLSARELATELEGDGYIIHYTLANKMERCVLYLYPHIPEVLF
                     KGLGHTQIDKLLAIRNNAEEVWAAHQFDTDITFESLWSENLSKFNEATPFQAKEFQSE
                     LITAMVEALDGKVSFETLYLDIDLDEQKFKKIAAKQQEIDNLVEKTVDQINTRQEQQA
                     AKFEPVIKNENKSVATESAKNVIDDVIDDNESDNEQNNAITDLSQLDAPLLDSQDNQT
                     EDYLSQIAHNFGLTPGMSIQEQREQRAESNGLTFACEGRQPVEDIWLIHPARQYRSEA
                     YSLALDIAESVGIDHLVEHVVKQPVDYTYAMKPTDSELSPSVLTLYSFLSMLQTAKHK
                     DENNCVLDSNFLFELDDITLVKLFRLIRVSRHIHQQGGEND"
     gene            6021..6578
                     /locus_tag="PXE50_001838"
     CDS             6021..6578
                     /locus_tag="PXE50_001838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2857 domain-containing protein"
                     /protein_id="HDL5622728.1"
                     /translation="MIKPITVNEALIGNALLNIKEGNIHPCLKMGFSEEQLKAINNLS
                     IDEIMDISNSVVSFAKVEINHETFWKLLAIAQTNTQQRQIIDRALLLGASIEMLHQYF
                     GLSTSEVSARRQLLGIEEKMGRKAAASDEESTHIWEIWQRYKQRMESLDSQEGLELLC
                     LIAEEGNMNLTVVWKLVSEWYSKHK"
     gene            6737..7922
                     /locus_tag="PXE50_001839"
                     /pseudo
     CDS             6737..7922
                     /locus_tag="PXE50_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252650.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            8714..9472
                     /locus_tag="PXE50_001840"
     CDS             8714..9472
                     /locus_tag="PXE50_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03761 family integrating conjugative element
                     protein"
                     /protein_id="HDL5622729.1"
                     /translation="MTTPLDLQLGPLRSEITFTLHTQYAHKLWMGRPMIRNEEGKVTQ
                     SSIISVPNCFAMLTQIQRAASEDDPYADDYLIQFEESVINYRKEIQKLTNDIVTLYAK
                     MLPEGISIERCANISPISYPIYVNSQLGYQLLYLLGDFDSLCRSVMTAAHIAIINRAE
                     AQDWIEAGARLIRKCFGIVERYKNSGITRRDYQENNARYQAAVKRMGYTLSDAVLTGE
                     HRAEFAPFIKQNGIVEEEQPVETHITTQANESQE"
     gene            9481..9990
                     /locus_tag="PXE50_001841"
     CDS             9481..9990
                     /locus_tag="PXE50_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3158 family protein"
                     /protein_id="HDL5622730.1"
                     /translation="MNLISDEIYRQLVKDSGLNASLKQLFSHFDTVSDYAVLQEQIQQ
                     ARAYFMNAQDGMVQYVRSEFSPLAVYMIKDKASSSGGTFLRWRSMQNARTGGTVWQPI
                     VDDESVPVDVRQKVVAVEKDRILINMQISVFNHILRQLVDCTEKLKEVDNAVAKSGLY
                     PLKNPVCNP"
     gene            10096..10296
                     /locus_tag="PXE50_001842"
     CDS             10096..10296
                     /locus_tag="PXE50_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622731.1"
                     /translation="MANVKMKFSVEIDGEVIIQHEIEEQAEKRSYFSQERKLAKEIIN
                     KMNEFYSDRWIDAKPWIASDDK"
     gene            complement(10412..10615)
                     /locus_tag="PXE50_001843"
     CDS             complement(10412..10615)
                     /locus_tag="PXE50_001843"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622732.1"
                     /translation="MELRKFPHHIIFIEQAKYGLQNYLLFELLTRTGQAVYFKHPIFH
                     TPNKEMRIVFVQDHKFLSLWQNK"
     gene            10724..11242
                     /locus_tag="PXE50_001844"
     CDS             10724..11242
                     /locus_tag="PXE50_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL5622733.1"
                     /translation="MRYIKYSLLLISTMIMSGCAELSAINDKVGDWAGQMNQTLYGSK
                     ESSVEQHNGRQVYIKTRNGKYVYQDSGTLQLKQNIDEVFLKVRREFGFRPTNADSDAR
                     KVYHTVQGTFYHVSGYFKSDVDNDGVDLGENYLEVIIEKGSKGTVNVEWKATGSTRWL
                     DSTKQRLLNTLK"
     gene            11403..13454
                     /locus_tag="PXE50_001845"
     CDS             11403..13454
                     /locus_tag="PXE50_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HDL5622734.1"
                     /translation="MKLFICEKPSQARDLASVLGATSKGDGLLATNDKSIIVTWGFGH
                     LVEQYQPEDYDEVWKRWAFETLPIIPAQWKMAPKKESKKQYNVVIGLIKKASLVVIAT
                     DADREGEMIARELLDLAGYRGQIQRCWLSALDDASIRKALQTLKSGKETEALYYAGMG
                     RSRSDWLIGMNFSRLFTLMAQAKGYSGKPLSVGRVQSPTLALVVNRDREIANFVPKAH
                     YSLAVQLATASDETFVAGLSIPEQYLDESGLCLDSRVIQQAEAQIKQVGIAKVITVET
                     KREKKAPPLLYALSDLQGECNRLFGFGAQQVLDIAQSLYEEHKITTYPRTDCGYLPES
                     QLTEVPMVIRSLVAADSELQTLLPRLNLQQKSRAWDDKKITAHHGIIPTIKKADLSKL
                     SEEEMKVYDLIRRRYLAQFLPHLETDKTIATLQSSGHTLIARGNVIVSQGWRILFGKN
                     ADEDVGSDDEKQGLPALTANQQCRVTHSEVRTLQTKPPAHYTEGTLLEAMKNAARFVT
                     DPRLKQRLRETEGLGTEATRAGLIQGLIDKGFLIKKKKSLMASAEAIALIDSLPDLLK
                     NPGLTALWEQALNQIAEGSMTLDDFMQRQETFVRQLIGNCMQQGMSLGNIEIRKCPEC
                     GKPMRKINHAKGTFWGCTGYPDCQHKEADKKVKSTSNKSTKKNSSLNVLDQLNKLRSQ
                     L"
BASE COUNT         4414 a         2587 c         2773 g         3714 t
ORIGIN      
        1 gagcagcttg gtagctcgtc gggctcataa cccgaaggtc gctggttcaa atccggcccc
       61 cgcaaccaca ttccaaaccc tcgatagtga atcacatcga gggttttcgt tttatttgcc
      121 aaaaaacagc aaaaaataac cgcttgttga ctgcaaaagc ttcctctcgc tttcatttct
      181 cgttacactt ctactacatt tacgcttttt tgattattat gagcaatatt ttaactgtta
      241 cccaactcaa ctattccgtc cgccatttgc tcgaaatgga aatgagccat atttggctaa
      301 ccggcgaaat ctcaaatttc agccaaccag tttcggggca ttggtatctc actttaaaag
      361 atgacaaagc acaagtgcgt tgtgcgatgt ttaaaatgaa aaatgtaaga gtgaattttc
      421 gcccacaaaa cggtatgcag gtgctggtgc gggcaagtgt tacactctat gagccacgag
      481 gtgactatca gctcattatt gagagtatgc aaccggcggg cgaaggcttg ttacagcagc
      541 aatttgagca acttaaagca aaactttcag ctcaaggctt gtttgctcaa gagcataaaa
      601 agccaattcc tacttttgtt aaaaccgttg gtattattac ctcctcaagc ggagccgcat
      661 tacaagatat tttacatatt ttgcaacgac gagatccgag cttatcagtg gttatttacc
      721 cggctctcgt gcaaggcaaa gaagcaacgc aagatattgt gaatatgatt gaactggcaa
      781 accgccgcaa tgagtgtgat gtattaattg tcgggcgagg tggcggttca ttagaggatt
      841 tatggtgttt caacgaagag agtgtcgctt atgccattta tcattcacaa atcccgatta
      901 tcagtgcggt gggacacgaa accgatgtga ccattgctga ttttgttgca gatttgcgcg
      961 caccaacgcc ttcggctgct gcggaattag tcagcagaga tcaaaatgaa ttgaaacgcc
     1021 aattacaaca tcagtttgat aaagtgaatt tagcctttga ccgagtttgg aaccataaat
     1081 ttaaccgttt ccaacaactc cccttacgcc tgaatgctca gcatccaagc aaacaaattc
     1141 aatcgcaaca gcaacgtttt gattatatgg aataccgcct cgagcaggca atttatgcac
     1201 ttgttgcagc caaaaagcag gtggggaaag agctaaatgt ccgtttaatt caccaacatc
     1261 cgcaaaagca gattgaacgc caatcccaaa tgcttaagca attggagctg aaactccatt
     1321 ggcaaatgga gcagcaactc agcaaaaaac agcaaaaatg gaaaaacatt acgcaacggt
     1381 ttgaacgcaa cccgctacct tatcaacttt atcagcaaca aacgatggtg gcaaaaatgt
     1441 cgcaacgctt ggcttattct atcgaaaaaa taatgctgaa agagcagcga cattttcaag
     1501 agttatgcac taaacttgat ggacttagcc cattgaaaat cttgaccaga ggctactcaa
     1561 ttacccaaac taaagacggt aaaacgctta cttcaacaga aaatattgaa cgtggtgagg
     1621 ctattatcac ccaactaaaa acaggaaaaa taataagtca agtagtggat tttttgtagg
     1681 ggaaattttg aacgctgcca atttttaaaa ttatttatag taaaatcagt aggttaaata
     1741 tttataaaca gggttgttca cttagttatc cacaggtgat gtgcataact atttttgtaa
     1801 agatgaattg agtgctgatt tttaaatcaa ccgatttcaa aaggcatttt tacgcttgca
     1861 caagcggtca tatttcccta taatcgtgca aaaattaagc cagtgtggcg aaatcggtag
     1921 acgcagcgga ttcaaaatct tttgcgtaga ctaataggaa atactggcga ttgaataaaa
     1981 aacactctca gcctgagtga tgaaattggt agacatgatg gattcaaaat ccattggtga
     2041 ataaccgtgt cggttcgagt ccgacctcag gcaccattca actgcgttcc tttcaaataa
     2101 tactcactct aaatatacag tttataatgc caatactcct taacttcaac tttgttaaga
     2161 gagtaaatta tgaaaccatt acaaaacggt acaaacaaac cttttaccat tactattgct
     2221 tcgaccaaag gaggctctgc caagagtacg aatgccgcta acattggtgc attctgtgca
     2281 gaacacggtc taagaaccct tcttattgat accgatactc aacccacatt aagctcttat
     2341 tatgagttgg aatatcaagc tcccggtgga acttatgaat ttctgcattt taaagatgta
     2401 gatcctaccc acattatttc tagaacggct atcccaaatc ttgacttgat ccagtctaat
     2461 gacccgtcaa ataaaatcag cccaatgcta agagactcac cggacggggc tttacgtttt
     2521 agtttactgc tccagaaaat tgaaggctat gatgtcatta tcattgatac ccgtggcact
     2581 cgagatatta ctgtagatat gtcggtattg gctgctgatg ttcttttctg cccgattctt
     2641 cctcatatct tgtcagctaa agaatttatt cgtggcacaa ttggtatgta tcaagatcta
     2701 gaaactttta cagcctttgg ttttaccctg ccaccgttaa aagcaatgat taactgtgtt
     2761 gatcatacca aagatgtcaa attggtttcc gactacctgc atactctctt ccaaaatgag
     2821 tttgatgaaa acaaaacatt actggaattt tctgtgcctg atcgtgtggc ataccgagaa
     2881 gcggcaactt tttcaaaacc tgtctatcgc cagagccaag ctgaatatga aaccattcgt
     2941 cagctttgtg cattactgat gccacagttt gcacaatcac atttttctga gtagttgggg
     3001 gatttatgtc taacccaaat aaaccaacca cccatctcta ttcagcagaa gctgaagccg
     3061 ctgtcatcgg gggattgtta ttagataaca ctctctttga cgatgtcatt ggcaagatta
     3121 attcggctga cttttatttt ggtgtgcatc aagccttatt caaggggatt acggatttaa
     3181 ttgaggtggg gaaacctgca gatattctca cattagatga atacctaaaa cagaaaaatc
     3241 tgttgaagga aatcggcggt tttgcctatc ttgcagaagt ttcaaaaaac accccttcgg
     3301 cggccaatgt gggggcttat gctgatgtgg ttctgttaca cagtaaacac cggcaacttt
     3361 taaaactggg gcagtttatt gtcgatcaga cacagactgt gaaaacaccg gaaaaacttg
     3421 aatcagttat tgatgaagtt gagaaaaaaa tgactgaatt cagcctttct gacaatacca
     3481 aatctgcaac agatttaagt gatatttttg ccagtatgct ctctcgtatg gagctttcgg
     3541 ctaaaaatgg tgatcctgtg actggaacac cgacaggtat tcaaggcatc gatgaagcga
     3601 ctaccggtgg gcaaccgggt gatttaattg tgattggtgc ccgtccttcg atgggaaaaa
     3661 ccgcattttc tcaaactatt gcctaccata cacttgaaaa attcgagtcg gctcctgtgt
     3721 tctatcacag tatggaaatg ccggcagatc agattttaca acgttttctt gctatgcgtg
     3781 cccgagtcgg attgcaaaat attcgacaag cagaccgctt ggacgatgag gaatgggcaa
     3841 aattgacagc tgcaatgggg tatatccttg aacactggaa aaatcgctta gttattgatg
     3901 atgaaggtag tctgactcct caaaaattaa gaactaaggt tcgccaaaat gcccgtaagt
     3961 atggaaaacc gtcagccatt tttattgact atattcagct tatgcagact tcgcaacgct
     4021 atgaaaaccg caatttggag attgcgaata tttctcgctc acttaagttg ttagccaaag
     4081 agatggattg ccctgtttat gctttatctc agctgaaccg ctcattggaa cagcgggcca
     4141 ataaacgccc tatcaactct gatttacgag aatccggctc acttgagcaa gatgccgatg
     4201 tcattttatt catctatcga gatgaaattt atgatgaaga ttccgccttc aaaggcactg
     4261 ctgaaattat tatcggtaaa caacgaaacg gaccgctgac ttcagtaatg accaatttta
     4321 gaagtgagtt tgcacttttt gagaatagag caagcacagc atcacattag gacagattat
     4381 gacaaaagat gaaaaaagat tagcagctat agcgaagggg ctaaatgttt cacctatttc
     4441 aaatacggca ccctcctatc agactgcgac accggctcat tacagtagtg atgaggaata
     4501 tattacggtg acattagata agttacggcc gtatgaacat aaccctagaa aaacccgtaa
     4561 tcctaacttt gagatgatca aagagtcaat ccggcgtcgt gggttagatc ataaacctaa
     4621 tattacccgc cgtccgggag aagattttta cattatcgct gacggcggta atactcgtat
     4681 tcaggcactt aaagaattgt ttactgagac caaagatccg aaattctggt ctatcagttg
     4741 ccaatataag ccttggcaag gtgatactgc cgacagtgtc gaagccgaac tcaatttact
     4801 tatcgggcat ttgatcgaaa atgatacccg tgcggatttg tcatttattg aaaaagctct
     4861 tggtatttta caggcgaaag aatattacga gaagaaattg aataaatcac tttcagcaag
     4921 ggaattagct actgagttag agggtgatgg ctatattatc cactatacgt tggctaataa
     4981 aatggagcga tgtgtacttt atctatatcc ccatattcca gaagttctat ttaaaggttt
     5041 agggcatact caaatcgata agttattagc tattcgtaat aatgccgaag aggtatgggc
     5101 agcccatcaa tttgatactg atattacttt tgaatcgctc tggtcagaaa atttatccaa
     5161 atttaatgaa gctacaccat ttcaagcaaa agaattccaa agtgaattga ttacggcaat
     5221 ggttgaagct ttagatggaa aagtgagttt tgaaacactt tatctagata ttgacttaga
     5281 tgaacaaaaa ttcaaaaaaa tagcggctaa acaacaagaa attgataatt tagttgaaaa
     5341 aacagtcgat caaatcaata ccagacagga acaacaagca gcaaaatttg aaccagttat
     5401 caaaaatgaa aataaatctg ttgccacaga atcagctaaa aatgttattg atgatgtaat
     5461 agatgataac gaaagtgaca atgagcagaa taacgccatt actgacttat ctcagctaga
     5521 tgctccattg ttagatagcc aagataatca aactgaggat tatctctccc aaattgctca
     5581 taacttcgga ctaacaccgg gaatgagcat tcaagaacag cgagagcaac gagcagaatc
     5641 caatgggctc actttcgctt gcgaaggtcg ccagccggtt gaagatattt ggttgattca
     5701 tcctgctcgt caatatcgtt cagaggcgta ttcccttgcc ttagatattg cagagagtgt
     5761 gggcattgac cacttggttg aacatgttgt gaaacagcct gtggattaca cttatgcaat
     5821 gaaaccgaca gatagtgaac tttcaccgtc tgttctaaca ctctattcat tcctttcaat
     5881 gttacagaca gctaaacata aggatgaaaa taactgtgtc ctagattcca acttcctgtt
     5941 tgagcttgat gatattacct tagtcaaact tttccgtctc attcgggtca gtcgccatat
     6001 tcatcaacaa ggaggagaaa atgattaagc caattaccgt aaatgaagca ttgattggta
     6061 acgccctgct caatattaaa gaaggaaata tccatccttg tttaaaaatg ggattttctg
     6121 aagagcaact aaaagcaatc aataatctca gtattgatga aattatggat attagcaact
     6181 ccgtagtgtc ttttgcaaaa gtagagatta accacgagac tttttggaaa ttactggcaa
     6241 ttgcacaaac taatactcaa cagcgacaaa ttatagaccg ggctttatta ctgggagcct
     6301 ctattgagat gctgcaccag tatttcggtt tatcgacatc agaggtttca gcacgccgtc
     6361 aattactcgg cattgaagag aagatgggac ggaaagccgc agcaagtgat gaggaatcca
     6421 ctcatatttg ggagatttgg caacgatata aacaacgaat ggaaagccta gattcacaag
     6481 aagggttaga gcttctttgc ctgattgctg aggaaggtaa tatgaatcta actgttgttt
     6541 ggaaactagt ttccgaatgg tattcaaaac ataagtaaaa aacaaatgcc ccgaagttgg
     6601 agctttgggg cattcgatat tgggtcttgt atatctatcc tatgaattac aaggactttg
     6661 ccgaagtccc gtgcattata gtcataggag ggagaatagc aagagaaaaa ctcttttatc
     6721 ctagtggaga gaaacaatgt ttagcagtac gaataagcca acagggcatg gattactatt
     6781 ttttggcaac caacacgaaa cagtccctac tcgattatta caagatccct gccttacacc
     6841 aagagcaaag tttgcttggc agctcattaa gtgcaatgtt caggcctttc aaggaggatt
     6901 atttccctct tatgagacgc tcagcaaaat gttatccgat agaccttatg cggaggctaa
     6961 attatcggaa aaagtcgtga ctcaaacact ctatttactc cgtcttactc gctggcttac
     7021 tttatgtgaa acagtgcgtg atgagcgagg ttatgtacaa ggtaatgtgt atatcctgca
     7081 cgatgaacct gtgccaattt tagatgcaat tcaattaaat agcgactatc tctctttttt
     7141 agataaatgc accaaacata aagatagcct tattaatggt gtggcaaatc atattgttga
     7201 aagtctaatg acagacaaaa ccaaatggca ttatgtctct catttagact gtttgcaaag
     7261 tcgttatcaa acataccagc aacagcagct ggtgaaagat aaacagccat cgcaaacaga
     7321 acaagaatta agcaaaattc aacaaaatat cctgacttcc actatggaag ttagggattt
     7381 tgatgaggaa gtcaggaaaa aatcctcaaa aaaccagact tccaataagg aagttagggc
     7441 taaaaatgaa gataagtcat tgattttaga cttacttcca ttaaggaagt cagatgtaca
     7501 gtactttata tattaataag tactgtactg gggaacctag cgaaattact tggccacaag
     7561 aaatcccact aacctcactt gaacaaaaac tcactgcaca ggcaatgaaa ggattcgatc
     7621 tcggtttatg ccaagctatt ttgctggaag cacaacaacg cattattcaa aagcaggatg
     7681 tgaaaaaacc gaaaggttat ctctatacgc ttatccagcg ggcgaagcag ggtgaattta
     7741 aaccctacta ttttgaatta ggaaaaaatc ttccctcaca aaatcagact aacaataatt
     7801 ctgctcattc tatacaaaaa ctgactgagc agcctactga gaaaccggta ttaactccag
     7861 cagacagaga gcaaatggcg agccgtatgc agaagtttag agctgaatta cttttacaat
     7921 aaggttaaaa aacaatcact gttaaggggc ttaacagcga gcaaaaaaca gacagcgtgt
     7981 agggattaca cagtgagtga aaaataatca gtgaagcggc ccgcttcaaa ggctaaaaaa
     8041 taatcactgt aaacactgtt tacaatgatt aaaaaacaat cagtgtagag gggttctaca
     8101 gtgagtaaaa aataatcagt gtagagggac tctacaatga gcaaaaaaca atcagtgtgt
     8161 agggggtaca cagtgattaa aaaacaatca gtgtagaggg gttctacagt gagtaaaaaa
     8221 taatcagtgt agagggactc tacaatgagc aaaaaacaat cagtgtgtag ggggtacaca
     8281 gtgattaaaa aataatcagt gtagaggggt tctacagtga gtaaaaaata atcagtgtag
     8341 aggggttcta cagtgagtaa aaaataatca gtgtagaggg actctacaat gagcaaaaaa
     8401 caatcagtgt gtagggactc tacaatgagc aaaaaacaat cagtgtgtag ggggtacaca
     8461 gtgattaaaa aataatcagt gtagaggggt tctacagtga gtaaaaaata atcagtgtag
     8521 agggactcta caatgagcaa aaaacaatca gtgtgtaggg actctacaat gagcaaaaaa
     8581 caatcagtgt gtagggggta cacactgatt aaaaaataaa cagagtagac agtgtctaca
     8641 aaggttaaaa aaatagacaa tggaaagccc ctttccaaag gctaaaaaac aatcaaataa
     8701 acaaggagca tatatgacca caccattaga cttacaatta ggtccacttc gtagtgagat
     8761 cacgtttacg ctacataccc aatatgccca taaattatgg atggggagac caatgattcg
     8821 taatgaggaa ggcaaagtaa ctcaatcctc cattatcagc gtaccaaatt gctttgcaat
     8881 gctaacccaa attcaacggg ctgcatcaga agatgatcct tatgctgatg attaccttat
     8941 tcaattcgag gaaagtgtga tcaattatcg gaaggaaatt caaaaactca ccaacgatat
     9001 tgtcacgctc tacgccaaaa tgttgccgga gggaatttct attgaacgct gtgccaatat
     9061 ttccccgatt tcttacccga tttatgttaa ttcacagtta ggctatcagt tgctttactt
     9121 acttggtgat tttgacagtc tttgtcgctc agtaatgaca gctgctcata ttgccattat
     9181 caatcgtgca gaagctcaag attggattga agcaggtgca agattaattc gtaaatgttt
     9241 tgggattgtt gaacgttata aaaattccgg tattactcgc cgagactacc aagaaaataa
     9301 tgctcgctat caagctgctg taaaacgaat gggctataca ttgtcagatg ctgtacttac
     9361 cggtgagcat cgtgctgaat ttgctccttt catcaagcaa aacggcattg ttgaagaaga
     9421 acaacccgta gaaacccata tcacgacaca agcaaatgaa tctcaagaat aaggagtgat
     9481 atgaacctca tttctgatga aatttatcgg caattagtca aagactccgg gttaaatgca
     9541 tctctgaaac agctatttag ccattttgat actgtctcag actatgctgt attgcaggag
     9601 caaatacagc aagcacgggc ttattttatg aatgcacagg atggtatggt tcagtatgtt
     9661 cgtagcgaat tctctcccct tgcggtctat atgattaaag ataaggcttc ttcttccggt
     9721 ggtacgtttt tacgctggcg cagtatgcag aatgccagaa ccggtggcac agtttggcaa
     9781 ccgattgtag atgatgaatc agtcccggtc gatgtgagac aaaaagttgt cgcagtggaa
     9841 aaagacagaa ttttgatcaa tatgcagatt tccgtgttta accatatttt gcgacagttg
     9901 gttgattgta ctgaaaaact aaaagaagtg gataatgcgg ttgcaaaatc aggtttgtat
     9961 cccctgaaaa atccagtttg taatccctga aaaagtaagg tttgtaaagc ctgcattaaa
    10021 aggcctttta aaggtaaggg gacaagcccc cttacctttc acgaagaaaa tgcctttatt
    10081 atttcggagt aaacaatggc aaatgtaaaa atgaaattca gtgttgaaat agatggtgaa
    10141 gttatcattc aacatgagat tgaagagcaa gccgaaaaac gctcttactt ttcgcaagag
    10201 cgtaaattgg ccaaagagat tataaataaa atgaatgaat tttattctga cagatggatt
    10261 gatgcaaaac cttggattgc ttctgacgat aaataaaagc aatgagcatc atcgattaca
    10321 ggtttcataa attgatttcg ctaaggtatt taacttaata gcaataaaat cttcctgagt
    10381 gtaggacgat ttatcccatt ctttaataag gttatttgtt ttgccatagg gataaaaatt
    10441 tatgatcttg aacaaagaca attctcatct ctttgttagg ggtatggaat atcggatgct
    10501 taaagtaaac cgcttgtcct gttcttgtta atagttcaaa gagtaagtaa ttctgtaatc
    10561 cgtatttagc ttgctcaata aagataatgt ggtgaggaaa ttttcttaat tccataatag
    10621 tccctagcat tttctctctt actacctaaa agaattttaa gtagatttta accgcacttt
    10681 tgcaaaaaat gaatgcagat aacccgcttg taaggagaat tccatgcgtt acatcaaata
    10741 tagcttactt ctcatttcta ctatgattat gtcaggttgt gccgaacttt ctgcaattaa
    10801 tgataaggtt ggagattggg caggacagat gaaccagact ctctatggtt ctaaagaaag
    10861 ctcagttgaa cagcataatg ggcgacaggt ttatattaaa actcgaaatg gcaagtatgt
    10921 ctatcaagat tccggcacat tacagttgaa acagaatatt gatgaagtct tcctaaaagt
    10981 tcgccgagaa tttggcttcc gtccaaccaa tgcagatagc gatgcacgta aggtttatca
    11041 tacggtacaa ggtacctttt accacgtttc cggttatttc aaatctgatg tagataacga
    11101 cggcgtggat ttaggtgaaa actacttaga ggttatcatt gaaaaaggca gtaaaggcac
    11161 ggtgaatgtt gaatggaaag ccacaggtag tacaagatgg ctagatagta ccaaacaacg
    11221 tttacttaat acattaaaat aagaactcat atcgctccta gaacctcttc ccagtggaaa
    11281 cactgggatt tttttatcgt tctcatctct caatttattg cattctacaa gataataagt
    11341 cgttgaatgc tatttaatca gcacattact attgcctatc cgtattgatt ttggaaaata
    11401 gtatgaaact gtttatttgt gaaaagccct ctcaagcccg agatcttgca agtgtattag
    11461 gtgctacatc gaaaggggat ggactattgg caactaatga taagtctatt attgtaactt
    11521 ggggatttgg tcatcttgtt gagcaatacc aacccgagga ttatgatgaa gtttggaaac
    11581 gctgggcatt tgaaacattg ccgatcattc ctgctcaatg gaaaatggct cctaaaaaag
    11641 agtccaagaa acaatacaat gtagtcatcg gattaattaa gaaagcctct ttggttgtga
    11701 ttgcaaccga tgcagacaga gaaggtgaaa tgattgctcg tgaactgtta gatttagccg
    11761 gataccgagg acaaatacag cgttgctggc tatcagctct cgatgatgcc agtatccgaa
    11821 aagctctcca aacactcaaa tcaggtaaag aaaccgaggc actttactac gctggtatgg
    11881 gacgtagccg ctcggactgg ctgattggaa tgaacttctc ccgtctattt accttaatgg
    11941 cccaagcaaa aggctattcc ggtaagccat taagcgttgg tcgagtgcaa agcccaacac
    12001 tagctcttgt ggtcaatcga gacagagaga ttgcaaattt cgtgcctaaa gctcattact
    12061 ccttagcagt tcaattagca acagcgtctg atgaaacctt tgttgccggg ctttcaatac
    12121 ctgaacagta tttagatgaa tcagggcttt gccttgatag tcgggtcata caacaagctg
    12181 aagctcaaat taaacaagta ggcatagcca aagtgataac ggttgaaacc aaacgagaga
    12241 aaaaggcacc gccgttgctt tatgcattaa gtgatttaca aggggaatgt aaccgcttgt
    12301 ttggttttgg ggctcaacaa gtacttgata ttgctcaatc actttatgag gagcataaaa
    12361 ttactactta tccccgtacc gattgcggct atctacctga atctcagctt actgaagtac
    12421 cgatggtaat tcgttcatta gtcgccgctg attcagagtt acaaactcta ttgcctcgat
    12481 taaatctaca acaaaaaagt cgggcttggg atgataaaaa aattactgct caccacggta
    12541 ttatccccac tatcaaaaaa gcagatttaa gcaagttaag tgaggaggag atgaaggtct
    12601 atgatctcat tcgccgtcgc tatctcgctc aattcttacc gcacttagaa acagataaaa
    12661 ctatagccac cttgcagtcc tctggacaca ctctgattgc tagaggaaat gtgatcgttt
    12721 ctcaaggttg gcgtatcctg tttggtaaaa atgcagatga agatgttggt agtgatgatg
    12781 agaaacaagg cttacctgca ttgacggcaa atcagcaatg ccgtgttaca cattcagaag
    12841 tccggacatt acaaaccaaa ccaccggcac actatactga aggaacacta ctcgaagcaa
    12901 tgaaaaatgc agctcgcttt gtgactgatc caagacttaa acaacggttg cgtgaaacgg
    12961 agggattggg tacagaggca actcgtgccg gattgattca agggctcatt gacaaaggtt
    13021 ttttaattaa gaagaaaaaa tccctaatgg cttctgctga agcgattgcc cttattgata
    13081 gcctaccgga tttattaaaa aatcccggtt taacggctct ttgggaacag gcacttaatc
    13141 aaattgctga aggcagtatg acccttgatg actttatgca acgacaagaa acctttgtac
    13201 gacaacttat cggaaattgt atgcaacaag gtatgtcatt gggtaatatt gaaattcgaa
    13261 aatgcccgga gtgtggtaag ccaatgcgga aaatcaatca cgctaaaggt acattctggg
    13321 gttgtacagg atatccggat tgccaacata aagaagcaga taaaaaagtc aaatcgactt
    13381 caaataaatc taccaagaaa aatagtagct taaatgtgct agatcagctg aataaattaa
    13441 gaagccagtt ataaatctaa gcagattatg gtattatcaa agtgcaaa
//
LOCUS       DANLZQ010000077        13488 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.077, whole genome shotgun sequence.
ACCESSION   DANLZQ010000077 DANLZQ010000000
VERSION     DANLZQ010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13488)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13488)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13488
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.077"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            109..2001
                     /gene="mnmG"
                     /locus_tag="PXE50_001846"
     CDS             109..2001
                     /gene="mnmG"
                     /locus_tag="PXE50_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HDL5622735.1"
                     /translation="MIYNQIYDVIVVGGGHAGTEAALAPARMGLKTLLLTHNVDTLGQ
                     MSCNPAIGGIGKGHLVKEIDAMGGLMAKATDVAGIQFRTLNSSKGPAVRATRAQADRV
                     LYRNAVRTALENQPNLDIFQQEVVDILVENNRAVGAVTKMGLTFKARAVVLTAGTFLA
                     GKIHIGLDNYAGGRAGDPAATMLADRLRDLNLRVDRLKTGTPPRLDARTINFDVLAKQ
                     HGDEVLPVFSFMGDVSQHPRQIPCYITHTNDQTHDLIRNSLDRSPMYTGIIEGVGPRY
                     CPSIEDKVMRFADRNSHQIYLEPEGLNTIEVYPNGISTSLPFDVQMGIVNSMKGLENT
                     RIIKPGYAIEYDYFDPRDLKPTLETKAIDGLFFAGQINGTTGYEEAGAQGLLAGINAA
                     LQVQGKEAWYPTRDQAYTGVLVDDLCTLGTKEPYRVFTSRAEYRLLLREDNADIRLTP
                     KAHELGLIDEARWVRFNQKMEAIEQERARLKSTWAHLQMPNLDELNALLANPLAREAS
                     GEDLIRRPEMSYEKLTQIALFAPAIEDKQAAEQVEIAIKYQGYIEHQYNEIERHKRHE
                     NTLIPVEFDYDKVESLSNEVRAKLMQHRPVSIGQASRISGITPAAISILLVNLKKQGM
                     LKRGEL"
     gene            2096..2320
                     /locus_tag="PXE50_001847"
     CDS             2096..2320
                     /locus_tag="PXE50_001847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622736.1"
                     /translation="MIYLRKLGFSPFDHQMFAQPSWYFCNALVHTNYENLRQGVFVTK
                     AYLVMFLENLLFEKSHSLSNRALRINENND"
     gene            2333..2947
                     /gene="rsmG"
                     /locus_tag="PXE50_001848"
     CDS             2333..2947
                     /gene="rsmG"
                     /locus_tag="PXE50_001848"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HDL5622737.1"
                     /translation="MLAKLNRLLAQAEINLTDQQKEQLVGFVRLLDKWNKAYNLTSVR
                     NPDEMLVKHILDSLVVSRHLQGETFIDVGTGPGLPGIPLAIANPDKQFVLLDSLGKRI
                     TFIKNALRELGIKNVTPVQSRVEEYTESQFDGVLSRAFASLNDMIDWCYHLPTENGKF
                     YALKGVYDEQEIIEIKQPIQLVEVIKLEVPELVGERHLVVLKKP"
     gene            3215..4137
                     /locus_tag="PXE50_001849"
                     /pseudo
     CDS             3215..4137
                     /locus_tag="PXE50_001849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248294.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            4160..5206
                     /locus_tag="PXE50_001850"
     CDS             4160..5206
                     /locus_tag="PXE50_001850"
                     /inference="COORDINATES: protein motif:HMM:NF016497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 43 protein"
                     /protein_id="HDL5622738.1"
                     /translation="MQIQNPVLPGFNPDPSIVRVGDTYYIATSTFEWFPGVRIHESKD
                     LVHWNLVKNVLDTTTLLDMRGNPSSGGIWAPDLSYAEGKFWLVYTDVKITDGAFKDMT
                     NYLTTAKEIQGPWSAPIKLNGIGFDASLFHDDDGRKYLVQQTWDHREYHHPFDGITLT
                     EFDVATMKLKPETQRTIFEGTEVKLVEGPHIYKINGEYYLFAAEGGTVFTHQEVVARS
                     KTLEAHSFQLAPNTPFITNFDTPNSYLQKQGHGSLVDTPSGEWYYASLTARPWNHATE
                     SATDPRGWSTLGREAAIQKVEFDQDGWPYIVGGHGGKTFVEAPKDAIFTEAPIDHSQH
                     DEFDSSTLDINWNT"
     gene            5209..5847
                     /locus_tag="PXE50_001851"
     CDS             5209..5847
                     /locus_tag="PXE50_001851"
                     /inference="COORDINATES: protein motif:HMM:NF036826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-1,4-xylosidase"
                     /protein_id="HDL5622739.1"
                     /translation="MPFSKEMGEVGNGVLKLIGRGSLANTHDLSLIARRWQAFYFDAE
                     TKVKFTPFSYQSMAGLTNYYNHSHWSWIFITKNDQGQQVIEVAENKGGLRNGQYTSYL
                     KDKAIVIPDGTEYVWFKTKVRKETYRYEYSFDGKQWHTIPVELDAAVLSDDYVLRSYG
                     GFFTGAFVGLAAVDYSSYESTAEFSYFDYKELGDKQLTDGSFSWEKSESCFG"
     gene            5866..6846
                     /locus_tag="PXE50_001852"
     CDS             5866..6846
                     /locus_tag="PXE50_001852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HDL5622740.1"
                     /translation="MKQRRFGKTNKMVSEIGLGTWQLGTKWGEPFNHQEAMAILETAY
                     EQGINFIDTADVYNNGQSEKAIGDILKKYPDFFYVVTKCGRALNPHTAEMYTPQAIEK
                     FVDGSLSHLGTEKLDMILLHCPPTLVYRNDEIFTKLEQLKAGGKLIDYGVSIETVEEG
                     LLAMEYDIAAMEVIFNMFRLKPLEQLFPTAQQKNVGIIARVLLASGLLTGRYNACTQF
                     GKDDHRTFNRNGEAFDKGETFSGVDYQLGLQAVEELKALFGTEDLIPYALRWVLMNEA
                     VSTVIPGASKVSQVITNAAVDNFPPLTENEMQKVEDIYNRLIRPSVHHLW"
     gene            complement(6908..8020)
                     /locus_tag="PXE50_001853"
     CDS             complement(6908..8020)
                     /locus_tag="PXE50_001853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5622741.1"
                     /translation="MFSFLKASPPAEQKVEASRVDAEYRKLRWQVFAGVFIGYAAYYL
                     IRKNFSLAMPYLIDEYGFTKADLGTVGVALSLAYGFSKFIMGNVSDRSNPKYFITIGL
                     LSSAIVSLVFGLVPGVLSSIPIMIILAALNGWFQGMGYPPGAKTMTNWFSTSERGVWW
                     SWWNVSHNLGGGLIGPLAILGLSIFGVWQSLFYLPALIAIVLAFVMFYLMRDTPESQG
                     LPPIDEYKGEKVVEKVESAHTLSSKDIFYKYILNNKFLWAIAIVVYWKNPAGNPLIDN
                     ICLVAIGFLIYGPVMMIGLQAADLVPRVATGTATGLTGLFGYLLGSASAGYVMGKLVD
                     MFGWDGGFYALILSCFLAFAFIALTLFKKTSKQLEV"
     gene            complement(8210..9283)
                     /gene="glpQ"
                     /locus_tag="PXE50_001854"
     CDS             complement(8210..9283)
                     /gene="glpQ"
                     /locus_tag="PXE50_001854"
                     /EC_number="3.1.4.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HDL5622742.1"
                     /translation="MKFKFKTLVAALALSATALGAYAQQSDKLVIAHRGASGYLPEHT
                     LESKALAFGQQADYLEQDLAMTKDNRLIVIHDHFLDGLTDVAKKFPERKRADGRYYVV
                     DFTLDEIKTLEMTENFEVKDGKQAQVYPNRFPMWQSHFTIHTLEEELEFIQGLEKSTG
                     KKIGIYPEIKAPWLHHKEGKDIALETLKVLKKYGYDSKTSPIYLQTFDFNELKRIKTE
                     LLPKLGMDVKLVQLVAYTDWHETEEKDKNGNWVNYDYDWMFKDGAMAEVAKYADGVGP
                     GWYMLVDKEKSKVGNIVYTPLVKELAKYKMELHPYTVRKDALPDFFQNVDEMYDALLN
                     KAGATGVFTDFPDTGVEFLKKQK"
     gene            complement(9353..10798)
                     /gene="glpT"
                     /locus_tag="PXE50_001855"
     CDS             complement(9353..10798)
                     /gene="glpT"
                     /locus_tag="PXE50_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate transporter"
                     /protein_id="HDL5622743.1"
                     /translation="MFGPFKPAPHIAELPADKVDARYKFLRWQVFAGIFFGYAAYYFV
                     RANFDLAQKGLIEAGMYTKTDLGVIGTAAGLAYGLSKFVMAGMSDRSNPKVFLPTGLL
                     LSGLCMTLMGLMPWATSSILVMWVMIFLNGWFQGMGWPPCGRTMVHWWSKSERGTIVS
                     IWNTAHNLGGMVPGAMVLLASALYFSEYGVEATAKDVWQQALYFPGIAAMIAAIPIYL
                     VMKDTPQSCGLPPVEKWRNDYPDDYNEKTYEHDLSTKEIFVTYVLKNKLLWYIAIANV
                     FVYLIRYGVLKWSPVYLGEVKHFNIKGTAWAYTIYELAAIPGTLLCGWVSDKLFKGKR
                     GLTGFIFMILTTAAVVAFWLNPATPESEIAQYAGHAWYENPYQLMDFIWMTTIGFLIY
                     GPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGTVAASAVVGWAADKFGWDGGFYVM
                     IGGGVLAILLTFIVMVEEGKHKAKLEDHYGK"
     gene            11156..12751
                     /locus_tag="PXE50_001856"
     CDS             11156..12751
                     /locus_tag="PXE50_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase/oxidase"
                     /protein_id="HDL5622744.1"
                     /translation="MQRHEQLAQVQQTQKWDFIIIGGGASGLGIAVDAASRGYKTLLL
                     ESHDFAKGTSSRSTKLVHGGVRYLANGDVALVREALRERGRLAKNAAHLFKNQSFIIP
                     NYKFKDCVMYRVGLGLYDMLSGNLSLGKTENISKTEAKRRLPTLNDTGLRTGTVYQDG
                     QFDDSRLAVNMAQTVVEHGGTVLNHAKVTSLHKTPQGKIDGVTFYDELNQQEHTVFGT
                     AVINATGVFMNDILSMDHGSTKKFVVPSQGIHLVLDKSFLPSNDALMIPKTSDGRVLF
                     AVPWHEVLVVGTTDTLIENPSYEPIPLEQEVNFILETAAQYLTKKPTRDDVKAVFAGQ
                     RPLAAPEKEGQSTKEVSRSHKVLTDATSGLITITGGKWTTYRQMAEDTVEEALKVHSE
                     LGNKPCVTVNLPIHGNIPAAQVNLQDHLYVYGSDIPQLRALMTETPEYAQKIHPRLDY
                     TVAEVIWAVRHEMAQTVEDVLARRVRLLFTDARAAIDSAAKVAAIMAKELGKDEMWQQ
                     QQVIQFLDVAKHYLLVDYQPQPI"
     gene            complement(12838..13137)
                     /locus_tag="PXE50_001857"
     CDS             complement(12838..13137)
                     /locus_tag="PXE50_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622745.1"
                     /translation="MENIKMEELKLTEKELLVLKGNALRMRFKAETNKTKNEIMQPFK
                     QVKQTGLALVNSPAVKTIALDFLVKRLLSMKGISFSVLGLTAFFLLQQKHKRDDS"
     gene            complement(13124..13480)
                     /locus_tag="PXE50_001858"
     CDS             complement(13124..13480)
                     /locus_tag="PXE50_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005760712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HDL5622746.1"
                     /translation="MTLLEIAQVRGEMARIEINEQKNQLISVLIFILLAFVFLLVSFV
                     SLLFGLDNYLLPEQKVKVFFSIAIIMFIAVTICGMMILSALKKQRHFMQSTLTELKLD
                     IAAFKSALTLKQNGEH"
BASE COUNT         4032 a         2762 c         2835 g         3859 t
ORIGIN      
        1 tgattttgat cctagcgttg ctaaaaatct atttccctga tgatcccttt ttacgctaaa
       61 atatgcgttt actttgtagc agaatttatt tgaataaaaa ggcgatatat gatttataac
      121 caaatttatg acgtgatcgt tgttggtggc ggtcacgccg gaactgaagc agcacttgct
      181 cccgctcgaa tgggcttaaa aaccctgctt ttaacccata atgtagatac cttaggacaa
      241 atgtcttgta acccagccat cggtgggatc ggtaaaggtc atctggttaa agagatcgat
      301 gcaatgggcg gtttaatggc aaaagccact gatgttgccg ggatccaatt ccgtactcta
      361 aacagctcga aagggcctgc agtgcgtgct actcgagcac aggcagaccg tgtgctttac
      421 cgcaatgcag tgcgtacagc attagaaaat caaccgaatt tagatatttt ccagcaagaa
      481 gtggtcgata ttttggtgga aaacaaccgt gcagtgggtg cagttaccaa aatgggctta
      541 acgtttaaag cccgtgcggt agttttaacc gctggtacgt tcttagcggg taagatccac
      601 attgggttgg ataactatgc aggtggtcgt gccggcgatc ctgctgcaac aatgttggca
      661 gatcgtctgc gtgatctgaa tttgcgtgtt gatcgcctta aaacaggtac accacctcgc
      721 ctcgatgccc gtaccatcaa ctttgacgta cttgccaaac agcacggcga tgaggtgtta
      781 cctgtcttct cttttatggg cgatgtctca cagcacccac gccaaattcc gtgctacatc
      841 acccacacta acgatcaaac ccacgattta attcgcaaca gtcttgatcg cagcccgatg
      901 tacaccggta ttatcgaagg ggttggtcca cgttactgcc cgtctattga agataaagta
      961 atgcgttttg ccgatcgtaa tagccaccag atctaccttg aaccggaagg cttaaatacg
     1021 attgaggttt acccgaacgg gatctccacc agcttgccgt ttgatgtgca aatggggatc
     1081 gtcaactcaa tgaaaggctt ggaaaacacc cgcatcatca aaccgggcta tgcgattgag
     1141 tacgactact tcgacccgcg tgatttaaaa ccaacccttg aaaccaaagc gattgacggt
     1201 ttattctttg ccggacaaat taacggcacg accggttacg aagaggcagg tgcgcaaggt
     1261 ttgctggcag ggattaacgc agcgttacag gttcaaggta aagaggcgtg gtatccaacc
     1321 cgtgatcaag cctacaccgg cgtgttggtg gacgacctct gtacattagg caccaaagag
     1381 ccataccgtg tgtttacctc tcgtgccgaa taccgtctgt tgctgcgtga agacaatgcg
     1441 gacattcgtt taacaccaaa agcccacgaa ctaggattaa ttgacgaggc acgttgggtg
     1501 cgtttcaacc aaaaaatgga agcgattgag caagaaagag ctcgtttgaa atccacttgg
     1561 gcacatttgc aaatgccaaa tctggacgaa ttgaacgcgt tattggctaa tcctttagcc
     1621 cgtgaagcaa gcggtgaaga cttaatccgc cgtcctgaaa tgagttacga aaagctgacc
     1681 caaatcgccc tatttgcccc tgctattgaa gacaagcaag cggcagaaca ggtggaaatt
     1741 gcgatcaaat atcagggcta tattgagcat caatacaacg aaatcgaacg ccataaacgc
     1801 cacgaaaaca ccctgattcc ggtagagttt gactacgaca aagtcgaaag cctctccaac
     1861 gaagtgcgag ctaaattgat gcaacaccgc cctgtctcca tcgggcaggc aagccgcatt
     1921 tccggcatca caccggcagc gatttccatt ctgttggtga atttgaagaa gcaaggaatg
     1981 ttgaaacggg gtgagctgta aatactacaa gcggttggtt ttgcagaaat ttttgcaaaa
     2041 ttgaccgctt gtattctttg gagaaggaaa tacccgaact accgccgtat ttttaatgat
     2101 atatctgcgt aaactcggtt tttcgccgtt cgatcaccaa atgtttgccc aaccttcgtg
     2161 gtatttctgc aatgcacttg ttcataccaa ttatgaaaat ctgcgacaag gtgtatttgt
     2221 gactaaagcg tatttagtga tgtttcttga aaatttattg tttgaaaaaa gtcattcgtt
     2281 aagtaatcgg gcattgcgta ttaatgaaaa taatgattaa ggaatttgca aaatgttagc
     2341 taaattaaac cgcttgcttg ctcaagccga aataaatttg accgatcaac aaaaagagca
     2401 gttagttggt tttgtgagat tattggataa atggaataag gcgtataacc tcacttccgt
     2461 tcgcaaccct gatgaaatgt tggttaaaca tattttggac agccttgttg ttagtcgtca
     2521 tttacaaggc gaaacgttta ttgatgtcgg cacggggccg gggctaccgg gcattccgct
     2581 ggcgattgct aaccctgata aacagttcgt gctactagac agcttaggca aacgcatcac
     2641 ttttatcaaa aatgcgttgc gtgagcttgg tattaaaaac gttaccccag tgcaaagtcg
     2701 agtggaggaa tacactgaaa gccagtttga cggcgtatta agccgagcct ttgcctcgct
     2761 taatgatatg atcgactggt gttatcattt accgactgaa aacggtaaat tttatgcatt
     2821 aaaaggcgtg tatgatgagc aggaaataat tgaaatcaaa caaccgattc agctagtgga
     2881 agtgattaag cttgaagtac ctgagttggt aggagaacgg catttagtag tgttgaaaaa
     2941 gccctaatac attggaagtt taatgataca agcggtcgaa tttgtaaatt tttttgcaaa
     3001 tctgcctgct tgtgttaact atttttcata aagcatacct ggttaataag gtgtgctttt
     3061 tttataacct attatttcat ctgatttatt tctattttgt gatgtgcttc acaaaaacaa
     3121 aaaaacataa tgtagtaaaa aatattcgta attgaagccc ttatttcttt acctgaaaat
     3181 aagcgaactt aattatataa cgaggaggtt cgtaatgaac agggtaacaa ataaggcaga
     3241 tgagtttgct aaactcagta cgtttgaacg tattgcttat ggtagtggcg acttagccca
     3301 aaatttagtt tttggtacag ttggtggttt cttactcact tacttaacta ctgtaaacgg
     3361 catttctgcc gtagcaggag caacgatttt cttaattgta aaatggggaa atgtgttttg
     3421 ggatccgttt gtcggtgcct ttattgacaa aagcaagccc tcagcacagg gtaaataccg
     3481 cccgtattta ctgaaatttg ggattcctct tgtggtttta gcttcactac tatttcttcc
     3541 tcttacctaa aatataatat tgggcattct gagtggattg cctccgtcgg tttattaggc
     3601 tctatccctg ggattttcct tgtattctta tggccgaaac tacgtcgcac tatcggtaaa
     3661 aagaactttt tctatctatt tttagggatt ttcgttctag ggcaactttg tctatgggta
     3721 tggcaatttg actccttcaa atactctcca accttaggct atatcggtcg tttcttacaa
     3781 caatggggat taacttctgc taccggtttt atgtgggcgt tagtgcctga ggttgttacc
     3841 tttggagagt ttaagtcgaa aaaacgtgta gcaggtatta ttaatgcgtt aatgggcttg
     3901 ttctttaaaa tcggcttggc gttaggcggt attattccgg gttatattaa tgcggtttat
     3961 ggttttaacg gctcgctttt ggctcaaacc gaagaggctt tatttggtat caatctttca
     4021 atgatttggg ctccaattat tttagcgatt attgcaggat ttgtgatgag tcgctatccg
     4081 ttaagcgata ctgatattga tcatatcaac gaaaaaatta ctgcttattc caaataattt
     4141 gagtatagga gaatagatta tgcaaattca aaatccagtt ttacccggtt tcaatccaga
     4201 tccatctatt gtgcgtgtgg gtgatactta ctacattgca acttctactt ttgaatggtt
     4261 tccgggagtg agaattcacg aatcgaaaga tttagtgcat tggaatttag ttaaaaatgt
     4321 cttagataca accacgttgt tagatatgcg aggcaatccc tcttcaggtg gtatctgggc
     4381 tcctgatctt tcttatgcgg aaggtaaatt ttggttggtt tataccgatg taaaaattac
     4441 agacggtgca ttcaaagata tgactaacta tctaactact gccaaagaaa ttcaaggtcc
     4501 ttggtcagct ccgattaaat tgaatggtat tgggtttgat gcttcgttgt ttcacgatga
     4561 tgatgggcga aaatatttag tgcaacagac ttgggatcac cgtgaatatc atcacccctt
     4621 tgacggtatt acgttaacgg aatttgatgt tgccacaatg aaactcaaac ctgaaaccca
     4681 gcgtacgatt tttgaaggta cagaagtgaa attggtggaa ggtccacata tttataaaat
     4741 taatggcgaa tattatctgt ttgcggcgga aggcggcaca gtatttacgc atcaagaagt
     4801 agtggctcgt tctaaaacat tggaggctca ctctttccaa ctggctccaa atacaccgtt
     4861 tattactaat tttgatacac ctaattctta cctacaaaaa caagggcacg gttcattagt
     4921 tgatacccca agtggtgaat ggtattacgc ttccctcaca gcaagacctt ggaatcatgc
     4981 aacagaatcc gcaaccgatc ctcgtggttg gtcaacatta gggcgtgaag ccgccattca
     5041 aaaagtagaa tttgatcaag acggctggcc ttatattgtg ggtggacacg gtggaaaaac
     5101 ctttgtagaa gccccaaaag atgcaatttt taccgaagct cctattgatc attctcaaca
     5161 cgatgagttt gatagctcaa cgttagatat taactggaac acttaagagt gccttttagt
     5221 aaagagatgg gcgaagttgg taatggtgtt ttaaaattga ttgggcgagg ctctcttgca
     5281 aatacacacg atttatcgct aatcgcacgc cgttggcaag ccttctattt tgatgcggaa
     5341 accaaagtga aatttacacc gttttcttat caatctatgg caggtttaac taactattac
     5401 aatcactcac actggtcttg gattttcatc accaaaaatg atcaaggaca acaggtgatt
     5461 gaagttgcag aaaataaagg tggactcaga aatgggcaat atacttctta ccttaaagat
     5521 aaagcaattg tcattcctga tggaacggag tatgtttggt ttaagactaa agttcggaaa
     5581 gaaacttacc gttatgaata ttcattcgat ggcaaacaat ggcacactat tccggttgaa
     5641 ttagatgcgg cagtgctttc agatgattat gtgttacgca gttatggcgg tttcttcaca
     5701 ggagcttttg tcgggctggc tgcagtggat tactccagtt atgaatctac agcagaattt
     5761 agctactttg actataaaga gttaggcgat aagcaactta cagacggctc attctcttgg
     5821 gaaaaatctg aaagttgctt tggctaaaat gaggagaata tcacaatgaa acaacgcaga
     5881 tttggtaaaa ccaacaaaat ggtgtcagaa attgggttag gcacttggca gcttgggacg
     5941 aaatggggtg aaccgttcaa tcatcaagag gcgatggcaa ttttagaaac cgcttatgag
     6001 caaggcatca attttattga taccgctgat gtgtataaca acgggcaaag cgagaaagcc
     6061 attggtgata ttttgaaaaa ataccctgac tttttctatg tcgttaccaa atgtggacgt
     6121 gcgttaaacc cgcatactgc tgaaatgtac acgccacagg caatcgaaaa atttgttgat
     6181 ggtagtttaa gccatcttgg cacggaaaag ttggatatga ttttgctcca ctgcccgcca
     6241 acgttggttt atcgcaatga tgagattttt acgaaattgg aacagcttaa agccggcgga
     6301 aaattaatag actacggtgt gagtatcgaa acggtagagg aaggcttgtt ggcaatggag
     6361 tatgacattg cggcaatgga agttatcttc aatatgttcc gcttaaaacc attggagcaa
     6421 ctcttcccaa ccgctcagca aaaaaatgtg ggtattatcg cccgtgtact gttggcaagt
     6481 ggtttgctta caggcagata taatgcctgc acccaatttg gcaaagacga ccaccgcaca
     6541 tttaaccgca atggtgaagc cttcgataaa ggcgaaacct tttcgggtgt ggattatcaa
     6601 ctcggtttac aagcggtgga agaattgaaa gccctattcg gcacggaaga tttaattcct
     6661 tacgccctac gttgggtatt gatgaatgaa gctgtgagta cagtaatccc gggagcaagt
     6721 aaggtttcac aagtaattac taacgcagcg gtggataatt tccctccact cactgaaaat
     6781 gaaatgcaaa aagtggaaga tatttacaac cgcttaattc gcccaagtgt gcatcatttg
     6841 tggtaattta tccaacgcta taaaaaatgg aactctaact tgagttccat ttttgtcaat
     6901 tttagcctta aacctctaac tgtttagagg ttttcttaaa cagagtcaat gcaataaacg
     6961 caaaggctaa gaaacaggaa aggatcaggg catagaaacc accgtcccag ccgaacatat
     7021 caaccagttt acccatcaca taacctgcac ttgcagagcc taacaagtag ccgaataaac
     7081 cggttaaacc tgttgctgta ccggtggcaa cacgaggcac taaatccgct gcttgtaaac
     7141 cgatcatcat caccggcccg tagattaaga aaccaatcgc cactaagcag atgttgtcga
     7201 ttaacgggtt gccggctggg tttttccagt acaccacaat cgcaattgcc cacaggaatt
     7261 tgttgtttaa aatatatttg tagaaaatgt ctttggaaga gagtgtgtgg gcagactcca
     7321 ctttttccac cactttctcg cctttgtact catcaatcgg cggtaagcct tgagattccg
     7381 gcgtatcacg catcaaatag aacatcacaa acgccagtac aatcgcaatc aacgccggca
     7441 gatagaacag ggattgccac acgccaaaaa tagataagcc taaaatcgcc aacggcccga
     7501 ttaaaccgcc gcccaagttg tgcgacacgt tccaccagct ccaccacacg ccacgttcag
     7561 aggttgagaa ccagttggtc atcgttttcg cccccggcgg atagcccatt ccttggaacc
     7621 agccgtttaa cgccgccaaa atgatcataa ttggaataga cgaaagcacg cccggtacta
     7681 aaccgaacac cagactcaca atcgctgaac tgagcaagcc gatagtgata aagtatttcg
     7741 ggttagaacg gtcggaaacg ttacccataa taaatttact gaagccgtaa gcgagtgata
     7801 atgccacgcc caccgtacct aagtctgctt tggtgaagcc atattcatca atcaaatacg
     7861 gcattgccaa cgagaagttt ttacgaatta aataatatgc cgcatagccg ataaagacgc
     7921 ctgcaaacac ttgccaacgt aatttgcgat attccgcatc aactctgctg gcttccactt
     7981 tttgttctgc tggtggagag gcttttagaa aggaaaacat tttactactc ctttaagaat
     8041 gaaatcctat ggctactata atctttcatt tggagcagaa aaagtggatt tttgaaaatt
     8101 tgtgagcaag attaaaatta ttttgagcga aaacgaaaag cggttgaatt tccttctttt
     8161 tttgcaaaaa atttgagaaa tctaaccgct tgtttcactt aaaaatcagc tatttctgct
     8221 ttttcaaaaa ttccacgccc gtatcaggga agtcagtaaa gacgcctgtt gcacccgctt
     8281 tattcagcag ggcatcgtac atttcatcga cattttggaa aaagtccggc agagcatctt
     8341 tgcgcacggt gtatgggtga agttccattt tgtacttcgc caactctttc actaatggcg
     8401 tgtaaacaat gttgccgact ttagattttt ctttatccac caacatatac cagcccgggc
     8461 cgacaccatc ggcatatttt gccacttctg ccatcgcacc gtctttgaac atccagtcgt
     8521 agtcgtaatt aacccagttg ccgtttttat ctttctcttc ggtttcgtgc caatcggtgt
     8581 aggcaactaa ctgcaccaat tttacgtcca tacccagttt cggtagtaat tcggttttga
     8641 tccgtttcag ctcgttgaaa tcgaaggttt gcaggtaaat tggtgaggtt ttgctgtcgt
     8701 agccatattt tttcaacact ttcagggttt cgagtgcaat gtctttaccc tctttatggt
     8761 gcaaccaagg ggctttaatt tcaggataga tcccaatttt tttgccggtt gatttctcta
     8821 atccttgaat aaattccagc tcttcttcca aagtgtgaat ggtgaaatgg gactgccaca
     8881 tcgggaagcg gttcgggtaa acttgtgcct gcttgccgtc tttcacctca aaattctcgg
     8941 tcatttcaag ggttttaatc tcatcaaggg tgaaatccac cacataataa cgaccgtctg
     9001 ctcgtttacg ctcagggaat tttttcgcca catcagttaa accgtctaaa aagtggtcgt
     9061 gaatcacaat caggcggtta tctttggtca tagcaagatc ttgctctaaa tagtccgctt
     9121 gttgcccgaa tgctagagct ttagattcaa gcgtatgctc aggtaaataa ccgcttgcac
     9181 cacggtgggc aatcactaat ttatcagatt gttgtgcata ggcacccaat gctgtcgcgg
     9241 acaatgctaa tgcagcaacc aatgttttga atttaaattt catagaatta cctcatataa
     9301 tgtaaaaata aaaggaagaa caaaaatgtc cttccttttg ataagttatt tattatttac
     9361 catagtgatc ttctaatttt gctttgtgct tgccttcttc aaccatcaca atgaaggtta
     9421 agagaatggc taatacacca ccaccgatca tcacgtagaa accgccgtcc cagccaaatt
     9481 tatctgctgc ccagccaact actgcagagg ctgccactgt accacctaag taaccgaata
     9541 aaccggtgaa acctgctgct gtacctgctg cttttttcgg tgcaagttca agggcgtgta
     9601 agccaatcaa cattaccggg ccgtagatta agaaaccgat agtggtcatc caaatgaagt
     9661 ccattaattg atatgggttt tcataccaag catggcctgc atattgtgca atttcagatt
     9721 ccggtgtcgc agggttgagc cagaacgcaa ccactgctgc ggtggtaaga atcataaaga
     9781 tgaaaccggt taaaccacgt ttgcctttga acagtttgtc agagacccaa ccacagagta
     9841 atgtacctgg aatcgcagct aattcataaa tggtatatgc ccatgctgta cctttaatgt
     9901 tgaagtgttt tacttcgcct aagtacaccg gcgaccattt caatacgcca tagcggatta
     9961 agtaaacgaa gacattcgca atggcaatgt accataacag tttgtttttc agcacataag
    10021 tcacgaaaat ctctttggtg cttaaatcgt gttcataggt tttttcgtta tagtcgtcag
    10081 ggtagtcgtt acgccatttt tcaactggcg gtaaaccgca agattgtgga gtatctttca
    10141 tcacaaggta gattggaata gctgcgatca ttgctgcaat tcccgggaaa taaagggctt
    10201 gttgccatac atcttttgcc gttgcttcta caccatactc actgaaatag agcgcacttg
    10261 ctaatagcac catcgccccc ggcaccatac cgcctaagtt gtgagcggta ttccagatag
    10321 aaacgatagt accacgctca gatttagacc accagtgaac cattgttcgt ccacacggtg
    10381 gccaacccat accttgaaac cagccgttta agaagatcat tacccacatt actaaaatgc
    10441 ttgatgttgc ccaaggcatt aagcccataa gggtcataca tagacctgaa agtaacaatc
    10501 cggtcggtaa aaatactttc gggttagagc ggtcggacat tcctgccatc acgaattttg
    10561 ataaaccgta ggccaggccg gcagctgtac caatcacacc gagatcggtt tttgtataca
    10621 taccagcttc aatcaagcct ttttgtgcta agtcgaagtt tgcacgcaca aaatagtaag
    10681 cggcatagcc gaagaaaatt cctgcaaaca cttgccaacg caagaattta tatcttgcat
    10741 cgactttgtc cgccggtaat tccgcaatgt gcggagcggg tttaaatgga ccaaacatag
    10801 tattctccaa tattacttag taaaacctct gagtaattcc tttttaggaa attagggaag
    10861 caataataaa tgaaaataaa aaatgacaaa gttatttttt ataaaaatgt gattcatttc
    10921 acaaaaaatt taccttaaac cacaaaaaat gattgaaaaa gaaaatcaaa catcagtatc
    10981 tctagcgata aaactctctt cttatgtaca gagaaagaac cataaaaagt acaatataga
    11041 aatattttgt gacatagatc taatttttaa acaaatgtct ttgaagtcat tttattttcg
    11101 tttatgctaa ttaagtaatg attaaatgtt ttaattcgag caaaaggagc aaaaaatgca
    11161 aagacatgaa cagctagctc aagtacaaca aacgcaaaaa tgggatttta ttattatcgg
    11221 tggtggcgca agtggtttgg ggattgcggt agatgcagct tcccgtggct ataaaacctt
    11281 attattagaa agccatgact ttgcgaaagg tacatcgagc cgaagcacaa aattagtcca
    11341 cggtggcgtt cgctatcttg caaatggcga tgttgcactc gtgagagaag cattgcgtga
    11401 acgaggtcgt ttagctaaaa atgcagctca tttatttaaa aaccaaagct ttattattcc
    11461 aaactacaaa ttcaaagact gtgtaatgta tcgtgttggt ttaggcttat acgatatgct
    11521 ttcaggcaac ctgagtttag gaaagactga aaacatcagt aaaactgaag cgaaaagacg
    11581 tttaccaacc ttaaatgata ctggtttacg tacaggcact gtttatcaag atgggcaatt
    11641 tgatgactca cgtcttgcag tgaatatggc acaaacggta gtagagcacg gcggtacagt
    11701 actaaatcac gccaaagtga cttcactgca caaaacgcca caaggcaaaa ttgatggggt
    11761 gactttctac gatgaactca atcaacaaga acatactgtt ttcggcactg cggtgattaa
    11821 cgcaaccggc gtatttatga atgatatttt aagtatggat cacggtagca cgaaaaaatt
    11881 tgtcgtacca agccaaggga ttcacttagt attagataaa tcattcttac caagtaatga
    11941 tgcgttaatg attccaaaaa cctctgacgg acgagtgtta tttgctgtac cttggcacga
    12001 agtgttagtc gtagggacaa cagatactct gattgaaaat ccttcttatg agccaattcc
    12061 attggaacaa gaggtgaact ttattttaga gacagccgca caatatctga caaaaaaacc
    12121 aactcgtgat gatgtaaaag cagtctttgc cggtcaacgt ccgcttgcgg caccggaaaa
    12181 agaaggtcaa agcactaaag aagtatctcg tagtcacaaa gttctcactg atgcaaccag
    12241 cggtttgatt acgattacag gtggtaaatg gacaacttat cgtcaaatgg cagaagatac
    12301 cgtagaagaa gcgttaaaag tccactctga actaggcaat aaaccttgtg tgaccgtcaa
    12361 cttaccgatt cacggtaata ttccggcagc acaagtgaat ctacaagatc atctatatgt
    12421 atatggctca gatattccac agttacgcgc cttaatgact gagaccccgg aatatgcaca
    12481 aaaaatccat ccgagactag attataccgt tgcagaagtg atctgggcag ttcgccacga
    12541 aatggcacaa acggttgagg atgtattagc tcgccgtgtt cgtttgctct tcactgatgc
    12601 gagagcggcg attgatagtg cagcaaaagt ggctgctatt atggcgaaag aattaggtaa
    12661 agatgaaatg tggcaacaac agcaagttat ccagttcctt gatgttgcga agcactattt
    12721 attggtagat tatcagccac agccaatcta atacgctaaa agcaagcggt taaaatcgat
    12781 aaaaatattg caattacgtt atttgcaact ttttaaacca ttttaaccgc ttgtatatta
    12841 gctatcatct cttttatgtt tctgttgtaa taaaaagaat gctgttaacc ccaatacaga
    12901 aaagctaatt cctttcatac tcaataatct ttttaccaaa aaatctaatg caatggtttt
    12961 aactgccggt gaattgacca gtgcaagccc tgtttgtttc acttgtttaa aaggctgcat
    13021 aatctcattt ttggttttat tggtttccgc tttaaatcgc attctaagtg cattaccttt
    13081 tagaactaga agttcctttt cggttaattt aagctcttcc attttaatgt tctccattct
    13141 gtttcaaagt taaagcactc ttaaatgcgg caatatctaa ttttagctcg gttaatgtac
    13201 tttgcataaa atggcgttgt tttttcaagg cagaaagtat catcattccg caaatagtca
    13261 cagcaataaa cataataatg gcaatagaaa agaatacttt aactttctgt tcgggtaaca
    13321 aataattatc taaaccaaat aataaactca caaaagaaac taataaaaat acaaaagcca
    13381 ataagataaa tataagtact gaaattaatt gatttttttg ctcattaatt tcaattcttg
    13441 ccatctcacc acgcacttga gctatttcca ataatgtaat gagactat
//
LOCUS       DANLZQ010000078        13427 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.078, whole genome shotgun sequence.
ACCESSION   DANLZQ010000078 DANLZQ010000000
VERSION     DANLZQ010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13427)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13427)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13427
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.078"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(<1..303)
                     /locus_tag="PXE50_001859"
     CDS             complement(<1..303)
                     /locus_tag="PXE50_001859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDL5622747.1"
                     /translation="MIITMKDIAKEANVSLGTVSNVLNGKSNVSLAKIEKVQAAVEKL
                     GYRKNIQASTLKSGTSNKIAIILPNITELKYACLYENLDLICTQNDLSLILYLTHNR"
     gene            complement(465..1805)
                     /gene="gdhA"
                     /locus_tag="PXE50_001860"
     CDS             complement(465..1805)
                     /gene="gdhA"
                     /locus_tag="PXE50_001860"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HDL5622748.1"
                     /translation="MSDLNALFQKIKQRDPNQAPFHQAVEEVFGSLAPFLAKNPKYTQ
                     QGLLGRIVEPERVISFRVTWVDDKGQVQVNRGYRVQMNSAIGPYKGGIRFHPTVDLGV
                     LKFLAFEQVFKNALTTLPMGGGKGGSDFDPKGKSDAEVMRFCQAFMSELYRHIGADTD
                     VPAGDIGVGGREIGYMFGQYKKLRNEFTSVLTGKSLTWGGSLIRPEATGYGAVYFAES
                     MLATKGQQIEGKSVVISGSGNVAQYAAEKVIQKGGKVLTVSDSNGYVLFPESGMTEAQ
                     LQALLELKNERRERLSVYATEQGLKYFDGQKPWGVKCDIALPCATQNELDTEDAKELV
                     KNGCICVAEGANMPTTLGGVEVFIGAKILYAPGKAANAGGVATSGLEMSQNAIRLSWS
                     REEVDQRLFNIMKAIHENCVENGTEADGFVNYVNGANIAGFKKVANAMLEQGIV"
     gene            complement(1998..2339)
                     /gene="bamE"
                     /locus_tag="PXE50_001861"
     CDS             complement(1998..2339)
                     /gene="bamE"
                     /locus_tag="PXE50_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HDL5622749.1"
                     /translation="MKMKSLLAAMLLALGVTACSTVEKVVYRIDVPQGNYLEQDKIAQ
                     LKVGMTAEQVEYLLGTPMLKNIFETHRWDYVFIKREGYKDPEQRNLFIYFDAKGLVSK
                     IDDSNANAEQK"
     gene            complement(2406..3407)
                     /gene="yejK"
                     /locus_tag="PXE50_001862"
     CDS             complement(2406..3407)
                     /gene="yejK"
                     /locus_tag="PXE50_001862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid-associated protein YejK"
                     /protein_id="HDL5622750.1"
                     /translation="MSINVSEIVLHQLQKTEGENPELNTFLRENLLAISPEVDQMMLQ
                     LHQAYQSKAKAYGIFKPESVFAQQLNRLLEQETDFLPFSHSCAKMLAAELIKYPFADG
                     GTFILCRYTFLATEYLFIALIDSRNSMLVDEQLEIKRTQYLEIAQYDIACRINLTELK
                     LDATSNRYLTFVKGRVGRKIADFFMDFLSAEEGFNPQLQNQTLLQAVSDYCEQGELSA
                     PQTREVKKQVFEYCKGQINSGEEIALNELSNALPTLNEIDFAQFTQEQEYGLEENIPP
                     MRNALKTLTKFSGSGKGVTISFNAELLGERLIWDELNDTLTIKGLPANLRDQLERNK"
     gene            3488..3874
                     /locus_tag="PXE50_001863"
     CDS             3488..3874
                     /locus_tag="PXE50_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015432850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDL5622751.1"
                     /translation="MTVIHTENAPAAIGPYVQAVDLGNMVLTSGQIPVNPETGEIPSD
                     IVQQTRQSLNNVKAIIEQAGLTVADIVKTTVFVKDLNDFAKVNAEYQAFFQENEHPNF
                     PARSCVEVARLPKDVGIEIEAIAVRR"
     gene            3906..4643
                     /gene="pgeF"
                     /locus_tag="PXE50_001864"
     CDS             3906..4643
                     /gene="pgeF"
                     /locus_tag="PXE50_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HDL5622752.1"
                     /translation="MDKIIPNWNVPKHIHALTTLRTGGVSKPPFDSFNLGDHVNDEPQ
                     DIAQNRALLVEKFQLPQAPLFLTQTHSTRVIELPYSGDNIKADAIYTNQPNQVCLVMT
                     ADCLPVLFASQDGSEIAAAHAGWRGLCDGILEATVEKFNCPPHEISAWLGPAIGPNAF
                     QVGSEVADQFCAFDPRAKEALIEDSTTSGKFLGNLYQIATQRLNKLGITAISGGEYCT
                     YSQPELFFSYRRDKQTGRMATLIWRTE"
     gene            4737..4812
                     /locus_tag="PXE50_001865"
     tRNA            4737..4812
                     /locus_tag="PXE50_001865"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4770..4772,aa:Ile,seq:cat)
     gene            5015..6229
                     /locus_tag="PXE50_001866"
     CDS             5015..6229
                     /locus_tag="PXE50_001866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL5622753.1"
                     /translation="MTATKKPLSDTLLKNLKYSPNAKPIADSNGLFILAQKKAKVWIY
                     SYISPKTGKRSTKNRIGSYPQMSLAEARLKRDELNTLVLQGLDPFEHLAKMQREAKEK
                     QESIQSFAYKWADWKLSKGKCKPKTMEKCLQRLENHLFPRFEGYTLEDFTLTDTINRL
                     TDLDRIMPDTLHRIAGNLIEILDYAVLCGRINFNPISVIKKAFSSVSTTHQPAIMPEE
                     LAEFMQDLQKSNRTPQIKLLVEWQLLNILRPFEAVAVQWSDIDWETKTLNIPADRMKG
                     GKNPHSVPLTKQAIAILEEMKKYNGHHKHIFTHRTDRNKPANSQTVNNAIKRLSGGKY
                     KGLLVAHGLRSIASTYLHERFTTETLVIEACLSHTNKDTVMSAYHRKNWLDRRRGIMQ
                     EWADFVEQCKSI"
     gene            6699..6905
                     /locus_tag="PXE50_001867"
     CDS             6699..6905
                     /locus_tag="PXE50_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family transcriptional regulator"
                     /protein_id="HDL5622754.1"
                     /translation="MENTPAKQRFMKIDEVSAVTTLSETQIYRKMKAGDFPQSISIGA
                     NSKVWLESEIQQWIQRKIEQHRNQ"
     gene            6915..7574
                     /locus_tag="PXE50_001868"
     CDS             6915..7574
                     /locus_tag="PXE50_001868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622755.1"
                     /translation="MTLETFNQQKAKFHEQEKAVLAIQTELDKAKNILEALQNEKAEF
                     VARQKTNLANIGTLSADEYVEIKNKNSGLQARIEYYQALIVDLENKCYAEQEILFQQQ
                     NELKQIRRIILLEKAEVLFNQFIEQNKENLAEIYTYLFYSGKFKQNKNLTDESEEQAI
                     LAYLTENIMARIEKEQPLEKTLILYSEQLASFEQKSPMALHREKFEAKPTGLAELINN
                     L"
     gene            7585..8535
                     /locus_tag="PXE50_001869"
     CDS             7585..8535
                     /locus_tag="PXE50_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P2 family phage major capsid protein"
                     /protein_id="HDL5622756.1"
                     /translation="MSLSTFAHALKLDKQGNVILFDDSPEEQAKLISRLKQNRLFKLL
                     NLVQTKHAKGEAIGLFTPIAGTTNTESGEEREPKQALAPAQKYHCEQINIDSYIRYEK
                     IDAYNLENSLEERLNQLLDDNLLRGLLMVGWQGVSRADTSNATNNQLAQDVKKGWLQK
                     IREGKPEAVINGATIGKEQQYKSLNALIKQGLGKISPAYAMGGDMIAICGRDIIADDV
                     IQLEHNDLSENLADLLTLCQQAKGGLKAVSIPYFPSNAILITRLDNLSLYLHLNNIRR
                     KAFDTPQKDSVETFYSLNVDYIVEDFNACCLIENIEVIEE"
     gene            8532..8726
                     /locus_tag="PXE50_001870"
     CDS             8532..8726
                     /locus_tag="PXE50_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622757.1"
                     /translation="MSLESYIQQAEEMELLEKLDFVSDLLELEKVSEIEAYRILTAHG
                     EPKPQPAQEKLIGCVDFLDD"
     gene            8844..9692
                     /locus_tag="PXE50_001871"
     CDS             8844..9692
                     /locus_tag="PXE50_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622758.1"
                     /translation="MTNYKLPARKWYTLEQATKRIKQLTGEDIEIEDLLHYWYLRKLE
                     LSIYLNRNGNGDLIIGNHSFNKEEYIVLEQPQIIIREDGSIELEGKESEEEFELEHIF
                     KKYRFDSFSTYTGLISIYSSTFGSVNIESEIIKNGICLNFARQLISAKHPETKKRISL
                     HLKILDFDKGRNTYLAPADLFILDEHLNEFILGNGGDEIEKISKNNKTQFSSTIRENQ
                     INFIRALLYMDYGIETPQEVKNAINSGELGRKIEKFRRENPNIENDKNFKFPTSVTLS
                     NWYSKA"
     gene            9770..10021
                     /locus_tag="PXE50_001872"
     CDS             9770..10021
                     /locus_tag="PXE50_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5622759.1"
                     /translation="MQLQKTISTFTQPNHRGIYVMTYSEQSYLNVKDVCEMLQLNRST
                     IYRQIKQGIFPKPTKIGKSSRWKFADIKAFLEPKPQEAN"
     gene            10021..10401
                     /locus_tag="PXE50_001873"
     CDS             10021..10401
                     /locus_tag="PXE50_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL5622760.1"
                     /translation="MAGLSIICPFCGNTARIRGSSRPSLLSYQAQLTCSNCGQLKADF
                     VGQLINIKRAVFIECDEANQWDKPENELIKEGKIQGKDNAQRLKELRGSQQDLFAKVP
                     GQLPPEKITPAEKIAKRANLSKTH"
     gene            10712..11773
                     /locus_tag="PXE50_001874"
     CDS             10712..11773
                     /locus_tag="PXE50_001874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ash family protein"
                     /protein_id="HDL5622761.1"
                     /translation="MKDLSPNQKQYTPFSAIMQKNLMDLLTKSARSPYSFSTVAKSTA
                     GRENPELHNTANSSTPLTRAIFIRSLHTPKERRNKACSSMVACSGQGSPLAVFGSPFV
                     AVFSPRYTLSPCTVRSVADSPLKLTNGLQKMNPSQITGKNRLNSFLFNNNQNDYSLLF
                     TNAKQSTPISAKISKNQDLCLTTLNRSPYASRAFAKSKAECGNSKEHQANNSTPLTRA
                     FFVRSSRTPKECQNKACSSMVACSGQGFALDCLPDVAVFHPVTRYRPTLWKMLAIAPK
                     NQHQELSKMKAFAYSFLCAIRTPETDTYQETVVRIISDSEQNARFQLTADYRLLLPRP
                     VAKIRLNSTAYTVKGGIYA"
     gene            11766..11930
                     /locus_tag="PXE50_001875"
     CDS             11766..11930
                     /locus_tag="PXE50_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622762.1"
                     /translation="MLNYSDIEQIRYFMDQAEEALDNNEEFKAVAELNTAQQFILALL
                     MNYEQGGENE"
     gene            11923..12558
                     /locus_tag="PXE50_001876"
     CDS             11923..12558
                     /locus_tag="PXE50_001876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622763.1"
                     /translation="MNNTTGQATQRNWQEIIANLQRLSESGESTIEIAKRYEAFSKTA
                     EQIQALVNNNGSEAEKEAFFAPVERFYLGLLETETRLKDAIAKDEENAQKLKEQKAAR
                     EAEQKRWDNLPFYAKDKFSDLICIESRETLEDKFFAISCMFDALKAVPNLLEIGLREE
                     GKDSVIDRLAEMSKLYLLFVDEQFSLLANEIQSGKYGKLDLNGSQNKGDLC"
     gene            12552..12770
                     /locus_tag="PXE50_001877"
     CDS             12552..12770
                     /locus_tag="PXE50_001877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622764.1"
                     /translation="MLTHRITLPDGTEIEFFAETDKETFAEIQRDLEGLKLPTFAEFV
                     AQERKKHRAKQAVKKARKIAKLARRKNR"
     gene            12912..13397
                     /locus_tag="PXE50_001878"
     CDS             12912..13397
                     /locus_tag="PXE50_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622765.1"
                     /translation="METALQLAQHLTGWTEEENSQAILKNFLDWKETFGEKTREETKI
                     VETLLDWINENEASFIEYPFNQEQRTPPKVAGYRILANNSTKTNEYFFIYPKQFKETL
                     AEFPLLMACTKLHEAGILHKPPRPEKGYEFQYTIAPKITGGSKKRAYKIVPIALEEEN
                     E"
BASE COUNT         4618 a         2787 c         2470 g         3552 t
ORIGIN      
        1 tcgattatgc gttaaataaa gaatgagaga taaatcattt tgcgtacaaa ttaaatcaag
       61 attttcatat aaacaggcat atttcagctc tgtaatattg ggcaatataa tagcaatttt
      121 attacttgtg ccacttttta acgtagaggc ttgaatattt ttacgataac ccaacttttc
      181 aacggcagct tgtacttttt ctattttagc taagctaaca ttactttttc cgtttaatac
      241 attcgatact gttcctaacg aaacatttgc ttcctttgcg atatctttca tcgtaatgat
      301 catatactgc cctttcacat actgctaaaa ctgagattgg catagatttt accataattg
      361 gcaaatgaaa tacgatttca atttagcttg tctctagcta caacctaaaa taaaaaaact
      421 gcctcgatat atcgaggcag ttcttgaata atagggataa taaattaaac aataccctgt
      481 tctaacatcg catttgccac ttttttgaaa ccagcaatat tcgcaccgtt tacatagttt
      541 acgaaaccat ctgcttcagt accattttct acgcagtttt cgtgaattgc tttcataatg
      601 ttgaataaac gctgatctac ttcttcacga ctccaagata gacgaattgc attttggctc
      661 atttctaaac ctgaggttgc cacaccacct gcgttagccg ctttacccgg agcataaagg
      721 attttcgcac cgataaagac ttcaacacca cctaatgtgg ttggcatatt tgcaccttct
      781 gccacacaaa tacagccgtt tttcactaat tctttagcat cttcggtatc taattcgttt
      841 tgggttgcac aaggtaaagc gatgtcacat ttcacacccc acggtttttg accgtcaaag
      901 tattttaagc cttgttctgt tgcatacaca gataagcgtt cacggcgttc gtttttcaac
      961 tctaataatg cttgtaattg tgcctctgtc ataccggatt cagggaataa gacataaccg
     1021 ttagaatctg aaaccgttaa tactttaccg cctttttgaa tcactttttc agctgcatat
     1081 tgtgccacgt tacccgaacc ggaaattacc actgattttc cttcgatctg ctgaccttta
     1141 gtcgctaaca tagactctgc aaaatacacc gcaccataac cagttgcttc cggacgaatt
     1201 aagctaccac cccaagtcag cgatttaccg gttaatactg aagtaaattc attgcgtaat
     1261 tttttgtatt gaccgaacat atagccgatt tcacgacctc ccacgccgat atcgcctgca
     1321 ggaacgtcag tatcagcacc aatgtggcga tataattcgc tcataaacgc ttggcagaaa
     1381 cgcattactt cggcatcaga tttgcctttc gggtcaaagt ctgaaccacc tttaccaccg
     1441 cccattggca atgtcgttaa cgcatttttg aatacttgct caaaggctaa gaattttaat
     1501 acgcctaaat caacggttgg gtggaaacga ataccgcctt tgtatggacc gattgctgag
     1561 ttcatttgta cacggtaacc acggtttact tgcacttgac ctttatcatc aacccaagtg
     1621 acacggaagc taattacacg ctcaggctca acaatacgcc ctaataaacc ttgctgggta
     1681 tatttcggat ttttagctaa gaaaggggca aggctaccga acacttcttc aaccgcttga
     1741 tggaaagggg cttggttcgg atcacgttgt ttgatttttt ggaaaagggc gtttaaatcg
     1801 ctcatattat actcctgaat aaattgatga tgttgtgtat ttaagatgag cgaagtctag
     1861 caagcaattt tagctttgaa aagatagatt agaaaaattt atcattaaaa taagaaaaat
     1921 taagtttaaa tgcttatttt ttattcaaaa aaataagccc acttttaaaa gtgggctttt
     1981 cgaaccaaca aatcgtccta tttttgttct gcattcgcat tgctgtcatc aatttttgat
     2041 actaaccctt tagcatcaaa ataaataaac agattgcgtt gttcaggatc tttataacct
     2101 tcacgtttaa taaacacata atcccaacgg tgggtttcaa aaatgttctt taacattggt
     2161 gtaccaagca aatattcaac ttgttccgct gtcataccga ctttaagttg agcaatttta
     2221 tcttgttcta agtaattgcc ttgcggtaca tcaatacggt acaccacttt ctcaacggtt
     2281 gaacaagccg ttacacccag tgcaagcaac attgcagcta aaagagattt cattttcata
     2341 attgaccttt tgataatcca aaattcagat aacgagataa tacctaaact gataaaaatt
     2401 ttccattatt tgttacgttc cagctggtca cgcagatttg ccggtaatcc tttgattgtc
     2461 agtgtgtcgt ttagttcatc ccaaattaaa cgctctccta ataattctgc gttaaagcta
     2521 atcgttactc ctttgcccga accggaaaat ttcgtcaggg ttttaagggc atttcgcata
     2581 ggcggaatat tctcttccaa gccgtattct tgctcttgcg taaattgggc aaaatcgatt
     2641 tcattcagtg ttggcaatgc gttggaaagc tcatttaacg caatttcctc tccactattt
     2701 atctgccctt tacaatattc aaacacctgc tttttcactt ctcgagtttg aggggcagat
     2761 aactcccctt gctcacaata atcgctcacc gcttgcaaca aggtttgatt ttgcaattgt
     2821 ggattaaacc cttcttccgc acttaaaaaa tccataaaga aatcggcaat tttacgccct
     2881 actctgcctt tcacaaaagt taaatagcga tttgacgttg cgtcaagttt cagttcagtt
     2941 aaattaatgc ggcaggcaat atcatattgt gcaatttcga gatattgcgt gcgtttaatc
     3001 tctaactgct catcaaccag cattgaatta cggctatcaa tcaacgcaat aaacaaatat
     3061 tcggtagcta aaaaagtgta acgacacaaa ataaaagtgc caccatcggc aaacggatat
     3121 ttaatcagct ctgctgcaag cattttggca cagctatggc taaaaggtaa aaaatcggtt
     3181 tcttgctcca acaagcggtt gagctgttga gcgaaaaccg actccggttt aaatataccg
     3241 taagcctttg ctttactttg ataggcttga tgtaattgca acatcatttg atcgacttca
     3301 ggggaaattg ccaataaatt ttctcgcaaa aacgtattaa gctccgggtt ctcgccctct
     3361 gttttttgta attgatgtaa cacgatttca gaaacattaa tgctcattaa ttcacttctc
     3421 tttattccaa ataataagaa aagatattat cattaatccg tttatttttc attaagagga
     3481 acacaagatg acagttatcc acacagaaaa tgcaccggca gcgattgggc cttatgtgca
     3541 agcagttgat ttaggcaata tggttttaac ttctgggcaa attcccgtga atcctgaaac
     3601 cggcgaaatc ccgagtgata ttgtgcaaca aacccgccaa tctctgaaca acgtgaaagc
     3661 cattatcgaa caagccggct taaccgttgc cgatattgta aagaccaccg tatttgtcaa
     3721 agatcttaac gacttcgcaa aggtaaatgc ggaataccaa gccttcttcc aagaaaacga
     3781 acaccctaat tttccggctc gttcttgcgt agaagtggct cgtttaccaa aagatgttgg
     3841 cattgagatc gaagcgattg cagtacgccg ataacaagcg gtcattttct tgagattttt
     3901 tgcaaatgga taaaattatt ccaaattgga atgtgcctaa acatattcac gcactgacga
     3961 ccttaagaac aggcggagta agcaaaccgc cttttgacag tttcaactta ggtgatcacg
     4021 ttaatgacga gccacaagat atcgctcaaa atcgtgcttt attggttgag aaatttcaat
     4081 taccacaagc tccgctgttt ttaacccaaa ctcacagcac ccgagtgatt gaacttccct
     4141 attcaggtga taatattaaa gccgatgcga tttacaccaa tcaaccaaac caagtctgct
     4201 tagtgatgac tgcagattgt ttgccggtat tatttgccag ccaagacggg tcggaaattg
     4261 cggcggcaca cgccggctgg cgtgggttat gcgatggcat attagaggcg acggtagaga
     4321 aattcaactg cccgccacac gaaatatcag cttggctagg gccggctatc ggaccgaatg
     4381 cttttcaagt cgggagtgaa gtggcagacc aattctgtgc ttttgaccca agagcgaaag
     4441 aagcccttat tgaagacagc actacaagcg gtaaattttt aggaaatctt taccaaattg
     4501 ccacccaacg tctgaataaa ttaggcatta ccgccatttc aggcggtgaa tattgcacct
     4561 acagccaacc agaactgttt ttttcctacc gccgagacaa acaaaccggg cgaatggcaa
     4621 ccttaatttg gcgaacagaa taaccctatt ttctctcgtt caataattaa ccgagtaatc
     4681 ttctgcctct agacgactac tcggtttttc tctataattc caaccacttt tcaaatcccc
     4741 ccatagctca gtggttagag caggcgactc ataatcgctt ggtcgctggt tcaagtccgg
     4801 ctggggggac catctaagcg ttgcatattg tctttcattg tctcaaattt actataaaat
     4861 caagaactta gattctttta tagtctctta ttgtcttctt tagttgcatt gtatcttagt
     4921 gtttatgatc cctaaaatga tccctatttt gaaaacggga aaatttaggg atcataaact
     4981 tcgataaacc cttatatatc aaggattaga agaaatgact gcaactaaaa aaccactttc
     5041 agacacatta ctaaaaaatc tcaaatattc cccaaatgcg aagcctatcg cagacagcaa
     5101 cgggctattt attcttgcac agaaaaaagc gaaagtatgg atttatagct atatcagccc
     5161 caaaacaggc aagcgaagca caaaaaatag aatcggtagc tatccgcaaa tgagcttagc
     5221 cgaagcacgc ttaaagagag acgaactaaa tacccttgtt ttacaaggct tagacccttt
     5281 cgagcattta gccaaaatgc aaagagaagc taaggaaaag caagaatcta ttcaatcttt
     5341 cgcctataaa tgggctgatt ggaagctatc aaagggaaaa tgcaagccta aaacaatgga
     5401 aaaatgctta cagcggttag aaaatcattt attcccacgt tttgaaggct atacgctgga
     5461 agattttacc ttaaccgata caatcaaccg cttaacggac ttagatcgga taatgcccga
     5521 cactttgcac agaatagcag ggaatttaat agaaattctt gattatgcgg tattgtgtgg
     5581 gagaattaat tttaacccaa tcagcgtcat taaaaaggcg ttttccagcg taagcacgac
     5641 acaccagcca gcaataatgc ccgaagagtt agccgaattt atgcaagact tgcagaaatc
     5701 aaatagaacg cctcaaatta aattattagt tgaatggcaa ctcttgaata ttcttagacc
     5761 gtttgaagcc gtagcggtgc aatggagcga tatagattgg gaaactaaga cgctcaacat
     5821 tccggcagat agaatgaaag gcggaaaaaa tccgcattct gtaccgctaa caaaacaagc
     5881 tatcgcaatc ctagaggaaa tgaagaaata taacggacac cataaacata tttttacaca
     5941 ccgaacagac cgaaacaaac cggctaatag ccaaaccgtg aataatgcaa taaaacgctt
     6001 aagcggtgga aaatataaag ggcttttagt ggctcacggt ttaagaagca ttgccagcac
     6061 ctatttacac gaacgtttta ctactgaaac gctagtaatt gaggcttgtt tatcccacac
     6121 gaacaaagac accgtaatga gtgcatacca ccgtaaaaac tggctagacc gcagacgtgg
     6181 aataatgcag gaatgggcgg attttgtaga acaatgcaag agcatttaaa tgacaaaggc
     6241 ggagcaatcc gcctttcttt ttgcttgatg aaaaattttc attttttcct atcagctccc
     6301 agcccgtgcc gtctatccca cgcctcgccc gcacacttaa agtctcgatt tctacgcaaa
     6361 tgcaaaatta agcccaaaca ttgccccgta tagcgtgaaa aactttcata tagccgtttt
     6421 ttattacgca attttacgca agaaaacgca aatttacgca ggcagaaaca ccacttttaa
     6481 aaactcgatg acagaacgat gaaagaaccg ctgaaaactt gcaaaaaatc agagaaaaat
     6541 aaccgcttgc aagttttcca aatcagaatt aagcccctct aatctgtaaa atctcctttc
     6601 acagccctaa caaatagcaa aaaatccaag atgatttatt ctttcacacg ttagcaggca
     6661 atagcacgcc aaagcaaatt tttacggagt aaaacaaaat ggagaacaca ccagcaaaac
     6721 agcgatttat gaaaatagat gaagtttcag ccgtaactac gctttcagaa acgcagattt
     6781 atcgcaaaat gaaagccggc gattttcccc aaagtatcag tattggggca aatagcaaag
     6841 tatggctaga aagtgaaatc cagcaatgga ttcaacgcaa aattgaacaa caccgcaacc
     6901 aataagggca aattatgaca cttgaaacat ttaaccaaca aaaagctaaa ttccacgaac
     6961 aagaaaaagc cgttttagct attcagaccg aattagacaa agcgaaaaat attcttgagg
     7021 cattgcaaaa cgaaaaagcg gaatttgtcg cacggcaaaa aacgaattta gccaatatcg
     7081 gcacgctttc agcagatgaa tatgttgaaa tcaaaaataa aaatagtggt ttacaagcac
     7141 gcatagaata ttatcaagcg ttgattgttg atttagaaaa taaatgctac gcagagcaag
     7201 aaatattatt ccaacagcag aatgaactaa aacaaatcag acgtataatt ttattagaaa
     7261 aagcagaagt attatttaat caatttattg aacaaaataa agaaaattta gcagaaattt
     7321 atacttactt attctacagt ggaaaattca aacaaaataa aaacctcaca gatgaaagtg
     7381 aagagcaagc tattctggca tatctaacag aaaatataat ggctagaatt gaaaaggaac
     7441 agccacttga aaaaacatta attctttatt ctgaacagtt agcaagtttt gaacaaaaat
     7501 cgccaatggc attacaccgt gaaaaatttg aagcaaaacc taccggctta gctgaattaa
     7561 ttaataactt ataagaggta aaaaatgagt ttatccactt tcgcccacgc attaaaacta
     7621 gataaacaag gtaacgttat tttatttgac gatagccccg aagaacaggc aaaactaatt
     7681 agccgcttaa aacaaaatcg cctttttaaa ttattgaatt tagtgcaaac caagcacgca
     7741 aagggcgaag cgattgggct attcacaccg atagccggca caaccaacac cgaaagcgga
     7801 gaggaacgag agccaaaaca agcccttgca cccgctcaaa aataccactg cgaacaaatc
     7861 aacattgata gctatattcg ctatgaaaaa atcgatgctt acaacctcga aaacagctta
     7921 gaagaacgct taaatcagtt acttgatgac aaccttctaa gagggctttt aatggttggc
     7981 tggcaaggcg taagccgtgc agatacatca aacgcgacaa acaaccaact cgcccaagac
     8041 gtgaaaaaag gctggctaca aaaaatcaga gagggcaagc ccgaagcggt aattaatgga
     8101 gcaaccatag gcaaagagca acaatacaaa agcctaaatg ctctgattaa gcagggatta
     8161 ggcaaaatta gcccagcgta tgcaatgggc ggagatatga tcgccatttg tgggcgggat
     8221 attatcgctg atgatgtaat tcagcttgaa cacaacgatt taagcgaaaa cctagccgac
     8281 ttattaacct tatgccaaca agctaaaggc ggactaaaag cggtaagtat tccctacttc
     8341 ccaagcaatg cgattttaat cactcgatta gataaccttt cgctatatct tcatttaaac
     8401 aatatccgcc gtaaagcgtt tgatacgcca caaaaagaca gcgtagagac attttactcc
     8461 ctcaatgtgg attacattgt agaagatttt aacgcctgtt gtttaattga aaatattgag
     8521 gttattgaag aatgagccta gaaagctata tccaacaagc ggaagaaatg gagcttttag
     8581 aaaaactcga ttttgtttca gacctgttag aacttgagaa agtcagcgaa attgaagcct
     8641 atcgcatttt aaccgcccac ggcgaaccta aaccccaacc ggcacaagaa aagctaatag
     8701 gttgcgtaga ttttcttgat gactaaccca agccccgaaa ggggcttttt gcatttttgc
     8761 aacaaaaaac gaccgcttgc accctttgaa attattgcta tcattaataa aaaacaataa
     8821 ccaaatcaaa tgagagtaca gcaatgacaa actataaact accggctaga aagtggtaca
     8881 ccttagagca ggcaacaaaa cgcattaaac aactcactgg cgaagatata gaaatagaag
     8941 atttattaca ttattggtat ttaagaaagc tagaattaag tatttattta aatagaaacg
     9001 gaaatggcga tctgattata ggcaatcatt cttttaataa agaagaatat attgtcttgg
     9061 aacaaccaca aataatcata agagaagatg gctctattga attagaaggc aaagaatcag
     9121 aagaagaatt tgaattagaa catatattta aaaagtatag gtttgatagt ttcagcactt
     9181 atactggatt aatttctatt tacagcagta cttttggtag tgtaaatatt gaatctgaaa
     9241 tcattaaaaa tggaatttgt ttaaattttg caagacaatt aatatcagca aagcacccag
     9301 aaacaaaaaa aagaataagt ttacatctaa aaatactgga ttttgacaaa ggcagaaata
     9361 cttatttagc acctgcagat ttatttattc ttgatgaaca tctaaatgag ttcatattag
     9421 gtaacggcgg agatgaaata gaaaaaatat caaagaataa caaaactcaa ttcagctcaa
     9481 caatacgaga aaaccaaatc aattttatta gagccttgct ttatatggat tatgggatag
     9541 aaacgcctca agaagtaaaa aacgccatta attcagggga actaggcaga aaaatagaga
     9601 aatttaggag agaaaacccc aatatagaga acgataaaaa tttcaaattc cctacaagtg
     9661 taacccttag caactggtat tcaaaagcct aaaatattgg aaatttccga atctactttg
     9721 gaaatttcca aacttctaaa acctactcac ctcacaatct cccccaacaa tgcaactaca
     9781 aaagacaata agcacattca cgcaaccaaa ccacaggggg atttatgtaa tgacctattc
     9841 agaacaaagc tatttaaacg tgaaagatgt atgcgaaatg ctacaactca accgctcaac
     9901 tatttatcga caaattaagc aagggatttt ccctaagcca actaagatcg gaaaatcaag
     9961 ccggtggaaa tttgccgaca tcaaagcatt tttagagcca aaaccacagg aggcgaacta
    10021 atggcagggc tttctattat ttgcccgttt tgtggcaata ccgcacgaat tagaggcagt
    10081 tctcgcccta gccttttaag ttatcaagca cagctaactt gttcaaattg cggacaatta
    10141 aaagccgact ttgtagggca gctaatcaac atcaaacggg ccgtatttat tgagtgtgat
    10201 gaagcaaatc aatgggataa acccgaaaat gaactaatca aggagggaaa aattcaaggc
    10261 aaagacaatg ctcaacgcct caaagaacta agaggctcac agcaagattt atttgcaaag
    10321 gtgccggggc aactaccgcc cgagaagatc actccggcgg agaaaatcgc caagcgggca
    10381 aacctttcaa aaacgcatta aacaggggga taaatggcaa caaaaaagcc ccgcaaggca
    10441 aaccatacgg agctattaaa atcgcataat gcgaaagata tgcaaagaaa ttaaagcagg
    10501 cttgacgatt tctgaaggtg ttagattctt tctaaagtct ttagggatag gtttatttct
    10561 agcattgttt ttttattttt tgccgtattt agcagaattt ataatcgccg taaaaaaaca
    10621 actagcaaaa aaatcggctt actttcaatg ataaaagcaa gccgaaatga caatccaaat
    10681 ttttaacttt aaataaagag tacaagaaga aatgaaagat ttatctccaa atcagaaaca
    10741 atatacgcca ttttcggcta taatgcaaaa aaatttaatg gatttattga caaaatccgc
    10801 ccgttcgcct tattctttct ctaccgttgc aaaatcaacg gcagggcgtg agaaccctga
    10861 actacataat acggcgaaca gtagcacgcc tttaacccgt gctattttta ttcgtagctt
    10921 acacacacct aaagaacgcc gaaataaggc gtgttcgtct atggtagcgt gtagcgggca
    10981 aggttcgccc ttggctgttt ttggttcgcc gtttgtagca gttttctcac cccgttacac
    11041 gctatcgccc tgcaccgtga gaagtgtagc cgatagtcct ttaaaattaa caaacggact
    11101 acaaaaaatg aaccctagcc aaattacagg caaaaaccgc ctaaactctt ttctatttaa
    11161 caataatcaa aatgattatt cgctattatt tactaatgca aaacaatcaa ccccgatttc
    11221 tgctaaaata agcaaaaatc aagatttatg cttgacaacc ctcaatcgtt cgccttatgc
    11281 tagccgtgct tttgcaaaat caaaagccga gtgtggaaac tcgaaagaac atcaggcgaa
    11341 caatagcacg cctttaactc gtgctttttt tgttcgtagc tcacgcacac ccaaagaatg
    11401 ccaaaataag gcgtgttcgt ctatggtagc gtgtagcggg caaggtttcg cccttgactg
    11461 cttacctgat gttgcagttt tccaccccgt tacacgctat cgccctacat tgtggaaaat
    11521 gttagcgata gcccctaaaa atcaacatca ggagctatca aaaatgaaag cattcgctta
    11581 ttcattcctt tgtgctattc gcacacccga aacagatact tatcaagaaa ccgtagtacg
    11641 cattatttca gacagcgaac aaaacgcccg ttttcagctt acagccgatt atcgcttact
    11701 actcccccgc cctgttgcaa aaatccgcct aaattctacc gcttacacgg tgaaaggggg
    11761 gatttatgct taattattcc gatattgaac aaatccgcta ttttatggat caagccgaag
    11821 aggctttaga caataatgaa gagttcaaag ccgtagcaga acttaacaca gcacaacaat
    11881 ttattctggc tttattaatg aactacgaac aagggggtga aaatgaataa tacaacagga
    11941 caagctacgc aaagaaactg gcaagaaatt atcgctaatt tgcagagact cagcgaatcc
    12001 ggggaaagca caatcgaaat cgctaaacgc tatgaggcat tttctaaaac cgccgagcaa
    12061 atccaagccc tagtgaataa caacggcagc gaagccgaaa aagaggcgtt ttttgcccct
    12121 gttgagcgtt tttatcttgg cttactagaa accgaaacac gcttaaaaga tgccatagcc
    12181 aaagacgaag aaaacgccca aaaattgaaa gagcaaaaag cagctagaga ggcagagcaa
    12241 aaaagatggg acaacctacc tttctacgcc aaagacaaat tcagtgattt aatttgcatt
    12301 gaaagccgag aaacgcttga agataaattc tttgcgatct cttgtatgtt cgatgcccta
    12361 aaagccgtac ctaatctatt agaaataggc ttgcgtgaag aaggcaaaga cagtgttata
    12421 gaccgattag ccgaaatgag caaactctat ttactgtttg tagatgagca attttcacta
    12481 ctggcaaacg aaattcaaag cggtaaatat ggcaagttag acctaaacgg ctcacagaat
    12541 aagggggatt tatgctaacg caccgcatta cactccctga cggcacagaa attgaatttt
    12601 ttgcagaaac cgacaaagaa acatttgcag aaattcaaag ggacttagag ggcttgaaat
    12661 tgccaacctt tgccgagttt gttgcccaag agcggaaaaa acaccgagca aaacaagcgg
    12721 tcaaaaaagc ccgaaaaatt gcaaaattag caagacggaa aaaccgctag cacctatcaa
    12781 aaagacttat tattgcagaa aatcacgctt taataaaaac gacctataaa gcaatccgca
    12841 agaaatggtt aagtttaact gaaaatatga gcggacaggt tcagcgggta gcgtgcgata
    12901 gattcgcaat aatggaaacc gccttgcagt tagcccaaca tttaacaggc tggacagagg
    12961 aagagaacag ccaagcgatt ttaaaaaact tcctagactg gaaagaaact ttcggcgaaa
    13021 aaacaagaga agaaactaaa atagtagaaa ccttgctaga ttggataaat gaaaatgagg
    13081 cgagttttat cgagtaccca ttcaaccaag agcaaagaac accgcctaaa gttgccggct
    13141 atagaatact tgcgaataac agcactaaaa caaatgagta ctttttcatt taccctaagc
    13201 aatttaaaga aacgctggca gaatttccgc tattgatggc ttgcaccaag ttacacgagg
    13261 cagggatttt acataagcca ccacgcccag aaaaaggcta tgaatttcag tacacaatag
    13321 cccctaaaat aacaggaggg agcaaaaaaa gagcttataa aatcgtaccg atagcattgg
    13381 aagaagaaaa cgagtaatta cagcaaaagc aagagtttca attcttg
//
LOCUS       DANLZQ010000079        13426 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.079, whole genome shotgun sequence.
ACCESSION   DANLZQ010000079 DANLZQ010000000
VERSION     DANLZQ010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13426)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13426)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13426
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.079"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(50..9694)
                     /locus_tag="PXE50_001879"
     CDS             complement(50..9694)
                     /locus_tag="PXE50_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
                     /protein_id="HDL5622766.1"
                     /translation="MNKHCFRTIFSKTLQRIVVVSELAKLAGKSESESMTSGAILQKI
                     CKIRPLAFSLFCALGFVTLSDNAMAETLIIQADSTAPKNQQPIILQTANGLPQINIQT
                     PNDKGLSHNKYSQFDVAEKGAILNNSRTNTATQQAGMVQGNPYLARGEAKVILNEVNS
                     SKPSVMKGYVEVAGKKAEVIIANPSGLHCDGCGIINADRATLTTGKPQINQGNLEGFV
                     VEKGKVTVAGKGLDNSRVDYTDILAREAKINAGVWSKKETKVITGKNTVKRSNSDNNL
                     QIIHTNQPLAGEEKPTVAIDVGELGGMYAGKIHLIGTEQGVGVRNAGHIGASADTLTI
                     DSQGRIVNSGTFNAQRQVQLNAQHGIDNQGKIENKQGNIQLNSKADIQNSGSIVARGG
                     NIQKKAETKIQQSGETVAKGNITYTARQIHADKNSLIAAGVDVTDTAQGEVRKLEAQS
                     VAGKTIQLTAPEKTTVQGKNIASGKINVAAAEIDANQSQNNAHTVEYSAKSGDIQANS
                     AQFSANQIKLTTPKWLSTEGSQLTAEVIEAQQANLNARGSVWKQTGEQDFRLKAESIH
                     TDSARFSVGGHFEIDGNRLTNNQGLLSSGKRLGLNLNDAVDSVDGKLVAKGELSIRAP
                     LLNNQQGLILSGEKQAITVNTLKNQSGVITSQTEQTLDITSELQNQGGRISASGVAIN
                     AQSLDNREQGEISSVKELALTVSQQVDNRHGVIQSVGNLTLNSTLLDNQGGVLKSATD
                     ITLNVPTVLNNRISENGSLIEAGGSLTMNSFEVENQGTLARQPQPIQGIIASQFVLNS
                     TKQLNNEKGGIYIGSSARFTLSDSLNNRNGEILSWGDLAIFGGKSLTMTNTEGKVSAN
                     NGLEITAKALSGDGDVQAGDIRLNLQENFDITKDINANRSMIIQTEGDILNRKKLAAN
                     DRLQLTANQITNAQNARISSADTRLTATSTVYNEGLINSRSDNDNAQTVIKAQEIHNI
                     GTGNIYGDKVALGAERILNQDKDGTSATIAARQSLGLAAKVIENNTLVYEANKKSGSL
                     IYSGGEIAIGRQLNEQDTVIGNAGQLHNRSSIIEAEGRIQLNADKVANVNSHYRSELE
                     TTDRQTVNEHFILPRDKHNRGGSDVYDNGHLPTINVNQLRKGYYRKTWSYWQKYDEAN
                     LPVITDISQLNATTVLAKPYAQSCANDESVDCTLLPAGNYKKDNPVWTWFNLTPPAED
                     APEMTPEIIQAMNEEDLANQHLSEAEQEKLQKEQGQGIAPVVPARPIEPVRGSTETEA
                     QYQKRLQTYQAELKAYEAAEAAYQRYVLLKPLIDWEAKYGANIQALDEAIAKHNKANL
                     SQEYPHFWNLWIKERMVKENITKASLPAQILAGGDLTYQSDEFINDKSWVIAGKALNP
                     IGRSRIANLDDADAVRQDWELGRRQFSFTEYHGGTRRRHSRYDENDGPLARLKEVHKD
                     MNIFVELENTSPTAYTDYVDAKAANAVKPEGNQVERGNLPDAPNPPTMAIERIPSPNA
                     AAFEVRSMTVDTRLPNQGLYRINPQADSHVLIETDPDFTDKKRWLSSDYMFNALRHDH
                     NNVHKRLGDGFYEQRLIREQINRLTGRQFLGDYTDFDSQYKALMDAGITFAQKFNLRL
                     GITLSPEQVASLTSDIVWFETQTVRLPSGETVSVLVPKVYALARKGDIDGKGSLISAD
                     ALTINSKEIVNQGTIAGRRLAQFNAERLENSGTLSGGVLAAKVSGDLENIGGKIEADK
                     AILLDIAGNFNHTSTTRTTQIDLDGFKRAETNLDRKALLHVKDENGLLQVQAGNITSA
                     GADIINDGQGQTYLSAKNQLNLTALQVGFDEKMGGGNHYRNEALNDVVISRVQGKGDV
                     VVSGKNLYSEGADLDAKARLALLAENDMVLGSATRSRDYEEYHKTKSGGALAKKTKTT
                     YDNISETEHKGTELTGEDILVKAGHDIQGESLLAVSRSGDIDIIGGNNVTLSSATNQL
                     SEQHIRETKRSGFLNGGEIGFTIGSQKTRQENSLEGAIQSTARNTLGSEGGNIRIQAG
                     NKASVSNVDVLISNEKTAVISGKNGVRVESGKDVINSTDNYEFSQSGLSIALSTPVTD
                     AVQSARQSVQKAKATQNEKLKGVYAVKAAEDAVIAAQNAQKVAETLGNLGNALTENHA
                     AAENPAVKISVSLGTQKQQRESRSQSVTHSKSTLNGGNIALISGAGKVALEGVDTRVK
                     DTLLLDGKLGIESKGVADTYQNNTKNKNHSASVGVFIGLDRDSFGIGFEAGVSGGKGK
                     ENIETETWQNNQLQAGKIVTNSANGKLMLDATNVKANHWEGEVQDFEARSRQDISKYK
                     SEYTEGSVHGTLAVGTTGVNGHVAYNGAKLNTAQVENQTAIDIGKSGMDVKVKKNAHF
                     EGAVMTSQAEKENNRFQAGTLTTGDIENHSELKTRSVAISGGTSGVNPMSALSLLGNK
                     NESERSTTKAAIGENIAITLTEDLNAETTLNHLNRDTQNANQKVTKYDISEVKETQEL
                     VKGIGEIAEKAYQIYTHSEREKVTEAKLELGKAQAQKASKEEIGKLEANLDRLQKEFD
                     KNYGTGSKTKRAVEAVTAALQGLAAKDVGQAAVGLASPYLNAEIKKYTEGDTQANLIA
                     HALLGAVEAAATGNNVLAGAAAGAGSEAAADFIVKTLYKGKSTQDLTEAEKQNVALLS
                     QLASGLASGLIGDSTQSAAVGADIGKRAVENNYLSNWQEQKRSQELKSCHGDARCENQ
                     VRLYWGLVDIGQDVSFVSGAVAGVPENLAESVEGLISMFSSPIETIVAMKELIAREDT
                     LSYIANMTKQEYLAKLDKMQVYYEQAGAVGSFNAGKEFGNMMTDVVTALTGAGALVKT
                     GVGTTAKIVTKSGKELAIPKTRSSASLGTCSFHGDMEVKTDKGYRQISSIKVGDKVLA
                     KNERTGITTYQKVQAHYSNPYDYTVYVEVADSKGKYHTIVSNKIHPFFTQVLSGRVPI
                     SSEGHSYNGEIAKAQWVDAQHLQKGYRLLAESGEWQTVTKVKIKQERLKAYNMTVEKD
                     HTYFIRGTNADNEGVWVHNDCWHALPNDAKQVKNIDGYKAYQFTDPKDGKVVTVVQKD
                     LNRFETPNHQAGVDPHFNRLSQQIDAETGRYLSTDNPVDGLYNRAYLRSETLQKIYAN
                     YEKLPNGNYRNKLTRQEIEQPIDIGHMYGWEHRRLSLAAKELNWSQKQFNDYVNARPE
                     NFRLENMSENRSHKNEMPGKHDIQRIKSDMEKFLKEGK"
     gene            complement(9746..11542)
                     /locus_tag="PXE50_001880"
                     /pseudo
     CDS             complement(9746..11542)
                     /locus_tag="PXE50_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250636.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
     gene            11676..12761
                     /gene="queA"
                     /locus_tag="PXE50_001881"
     CDS             11676..12761
                     /gene="queA"
                     /locus_tag="PXE50_001881"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HDL5622767.1"
                     /translation="MLVSDFHFNLPDELIARYPTAERSASRLLHLNGETGEFADQQFV
                     DLYDHINEGDLLIFNNTRVIPARLYGRKPSGGKVEALVERVLDEHRCLAHVKASKAPK
                     EGAELIFGEDKLGEGKGFTATMVARHDTLFELVFNEEQPLFELLQQAGHMPLPPYIDR
                     PDEDADQERYQTVYSKVLGAVAAPTAGLHFDNAMLEKLKAKGVDTAFVTLHVGAGTFQ
                     PVRVETIEDHKMHAEYAEVSQEVVDKILATKAKGKRVIAIGTTSVRSVESAAQAAEKD
                     GKLIAPFFSDTAIFLYPGKTFKVIDALVTNFHLPESTLIMLVSAFAGYRNTMNAYAHA
                     VETKYRFFSYGDAMFINKNPNALSDVP"
     gene            complement(12788..13326)
                     /locus_tag="PXE50_001882"
                     /pseudo
     CDS             complement(12788..13326)
                     /locus_tag="PXE50_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015701733.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         3199 a         3237 c         2727 g         4263 t
ORIGIN      
        1 aactagcatt gagggttcat ctttatattt ttcatataat tcattcatat tatttacctt
       61 cttttaagaa tttttccata tcggatttga ttcgttgaat atcatgtttt cctggcatct
      121 cattcttatg gctacgattt tcagacatat tttctaatct gaaattctcc ggtctcgcat
      181 taacataatc attaaattgt ttttgactcc aatttaattc ttttgccgct aatgataatc
      241 ggcgatgttc ccagccatac atatgaccta tatcaatagg ctgttcaatt tcttgacggg
      301 ttaatttatt gcgataatta ccatttggca atttttcata attagcataa attttctgta
      361 acgtttccga gcgtaaataa gctcggttat atagcccatc taccggatta tctgtcgata
      421 aatagcgtcc cgtttcggca tcaatttgct gagacaaacg gttaaaatgt ggatctaccc
      481 cggcttgatg gtttggcgtt tcaaaacgat tgagatcttt ttgaactact gtcaccactt
      541 tcccgtcttt cgggtctgtg aactgataag ctttatagcc atcaatattt tttacctgtt
      601 tggcatcatt cggtaaagcg tgccaacaat cattatgcac ccatacccct tcattatcgg
      661 catttgtacc tctaataaag taagtatgat ctttctctac cgtcatattg taggctttta
      721 atctttcctg tttgattttt accttagtga cagtctgcca ctcaccactt tcagcaagta
      781 agcgatagcc tttttgcaaa tgttgagcat caacccactg agcttttgct atctctccgt
      841 tgtaagaatg cccctccgaa gaaatcggca ctctgcccga taatacttgc gtaaagaacg
      901 ggtggatttt gtttgacaca atggtgtggt attttccttt gctgtctgcg acttctacat
      961 acaccgtata atcgtatgga ttactgtaat gagcttggac tttctgatag gtggttatac
     1021 cggtgcgttc atttttcgcc agcaccttat cgcccacttt aatgctggaa atctgtcgat
     1081 aacctttatc agttttgact tccatatcac cgtggaatga gcaagtgcct aaactagcgc
     1141 tcgatctggt cttaggaatc gcaagttctt tacctgattt ggtgactatt ttcgccgttg
     1201 tccctacacc tgttttaaca agagcaccag caccggttaa tgctgtcacc acatcagtca
     1261 tcatattgcc aaactctttt ccggcattaa aagaacctac agcccctgcc tgttcatagt
     1321 aaacctgcat tttatcgagt ttagctaaat actcctgttt agtcatatta gcaatatagg
     1381 agagcgtatc ttctcttgcg atcaattctt tcatcgccac aatagtttct attgggcttg
     1441 agaacatgga gatcaatcct tcaacgctct cagcgagatt ctcaggaaca ccagcaacgg
     1501 cgcctgatac aaaactaaca tcttgcccaa tatcaactaa tccccaatat aatcgaactt
     1561 ggttttcaca gcgggcatca ccatggcagg attttaattc ttgtgagcgt ttctgctcct
     1621 gccagttcga gaggtagtta ttctccactg cccttttccc aatatccgcc ccaaccgctg
     1681 ccgattgtgt actatcccct atcaaacctg aagccagtcc gcttgcaagc tggcttagca
     1741 acgccacatt ctgtttctcg gcttcggtta agtcttgcgt ggatttgccc ttgtagaggg
     1801 ttttaactat aaagtccgct gccgcttcgc tccctgcgcc tgcagcagcc cctgccagta
     1861 cattgttccc tgtcgcagcc gcttccaccg cacccagtaa ggcgtgggca atcaggttgg
     1921 cttgggtatc cccttcggtg tactttttga tttctgcatt taagtatggt gaggctaaac
     1981 ccactgccgc ttgtcccacg tctttcgccg ctaaaccttg caaggctgcc gtcaccgctt
     2041 ccaccgctcg tttggtttta ctgcccgtgc cgtagttttt atcaaactct ttttgcaagc
     2101 ggtctaaatt ggcttctaat ttaccaatct cttccttgct cgctttttga gcttgtgctt
     2161 tgcccaattc cagcttcgct tccgtcactt tttcacgctc actatgcgtg taaatctgat
     2221 aagccttttc tgcaatctcg cctatgcctt tcaccagctc ttgtgtttct ttcacctcac
     2281 tgatatcgta tttcgtcact ttttgattgg cgttttgcgt atctcggttg agatgattaa
     2341 gcgtagtttc cgcatttagg tcttcggtga gggtgatagc gatattttct ccaatcgctg
     2401 cctttgttgt gcttcgctcg ctttcgtttt tattgcccag taagctcagt gccgacatcg
     2461 ggttcacccc acttgtccct ccgctaatcg cgacacttcg ggttttcaat tcactgtggt
     2521 tttcaatatc gccggtggtc agcgtgccgg cttggaagcg gttgttttct ttctccgctt
     2581 ggctagtcat taccgctccc tcaaaatggg cgttcttttt cactttaacg tccattccac
     2641 tcttgcctat gtcgattgca gtttggtttt ccacctgagc agtgttcaac ttcgctccat
     2701 tatatgccac atgaccattt actcctgttg tccctaccgc caatgtgcca tgtacgctgc
     2761 cttctgtgta ttcgctttta tatttgctta tatcttgtcg acttcttgcc tcaaaatctt
     2821 gtacctcacc ttcccaatga tttgctttga cattggttgc atccagcatg agtttaccat
     2881 ttgcagaatt tgtaacaatt ttacccgctt gcagttggtt gttctgccac gtttcagttt
     2941 cgatattctc cttgccttta cctccactca ctcctgcctc aaaaccaata ccaaaactat
     3001 ctctatctaa accgataaat acgcccacac tcgcactgtg attcttattc ttagtgttgt
     3061 tttgataagt atccgcaaca cctttggatt caatacccag cttaccgtca agcagcaggg
     3121 tgtctttcac tcgggtatcc accccttcca gcgcaacttt gcccgctccc gaaatcaagg
     3181 caatattgcc gccgttcagg gtgcttttgc tgtgggtcac gctttgacta cggctttctc
     3241 tttgctgttt ttgcgtgccg agactgactg aaatcttcac cgccggattt tctgccgcag
     3301 catggttttc tgtgagtgca ttgccaagat tgcccagcgt ttctgccact ttctgagcat
     3361 tttgtgctgc aatcacggca tcctccgccg cttttaccgc atatacccct ttgagtttct
     3421 cgttttgtgt tgccttcgct ttttgcaccg attgccgtgc cgattgcacc gcatccgtta
     3481 ccggtgtact caacgcaatg cttaagcccg actggctaaa ttcataatta tcggtgctgt
     3541 taataacatc tttccctgat tcaacccgta ccccgttttt gcctgaaatc acggcggttt
     3601 tttcgttgga aatcagcaca tcgacattgc tcacgctcgc tttattgccg gcttgaatcc
     3661 gaatattgcc cccttcactg cccaatgtat tgcgtgccgt gctttggatt gccccctcta
     3721 agctgttctc ttggcgtgtt ttttggctac cgatagtaaa gccgatttca ccaccgttca
     3781 agaaaccgct gcgttttgtc tcacgaatat gctgttctga aagttggttt gttgccgaac
     3841 tgagcgttac attattaccg ccgataatat caatatcgcc actgcgtgag acggcaagaa
     3901 gactttcacc ttgaatatcg tgaccggctt tcactaaaat gtcttcaccg gttagttcag
     3961 tgcctttgtg ttcggtttca gaaatattgt cataagtcgt ttttgttttc ttcgctagcg
     4021 caccaccact ttttgttttg tgatactctt cataatcgcg agaacgtgtt gcgctaccca
     4081 acaccatatc attttcagcc agtaacgcta aacgcgcttt ggcatccaaa tccgctcctt
     4141 cactgtaaag gtttttccct gaaaccacca catcgccttt gccttgcacc cgtgaaatga
     4201 ccacatcatt caaggcttca ttacgatagt gattgccacc gcccattttt tcatcaaaac
     4261 caacctgtaa agcggtcaaa ttcaactgat tttttgcaga taagtaggtc tgcccctgtc
     4321 cgtcattgat gatgtctgcg cctgctgagg tgatgttgcc tgcctgtact tgcagcagtc
     4381 cattttcatc tttaacgtgc agtagggctt tgcggtcaag gttggtttca gcgcgtttga
     4441 aaccgtctag gtcaatctgt gtggttcgag tggtggaggt atggttaaaa ttgcccgcaa
     4501 tatccagcaa aatcgcttta tccgcttcaa tcttgccgcc gatattctct agatcaccgc
     4561 tcactttggc agcaagcacg ccaccactga gtgtgccact attctctaac cgttcggcat
     4621 taaactgtgc taaacggcgg cctgctatcg tgccttggtt tacaatctct ttactgttga
     4681 tggtaagcgc atcggctgaa atcaggctgc ctttgccgtc aatatcacct ttgcgtgcaa
     4741 gggcatacac tttcggcact aataccgata ccgtttcacc gcttggcaag cgaaccgttt
     4801 gggtttcaaa ccaaacaata tcgctggtca agcttgccac ttgctccggc gataaggtaa
     4861 tgcctaaccg aagattgaat ttctgcgcaa aggtgatgcc ggcatccatc agggctttat
     4921 attggctatc aaaatccgta tagtcgccca aaaattgtct gccggttaag cggttgattt
     4981 gctctcgaat taagcgctgt tcataaaaac catcgcccaa acgtttatgc acattgttat
     5041 ggtcgtggcg tagggcattg aacatataat cactgcttaa ccagcgtttt ttatcggtga
     5101 aatccggatc ggtttcgatc agaacatggc tatccgcttg agggttaatg cgataaagcc
     5161 cttggtttgg caaacgggta tcgaccgtca ttgagcgaac ctcaaatgcg gctgcattcg
     5221 ggcttggtat gcgttcaatc gccattgttg gcggattagg ggcatcgggt agattacccc
     5281 gttcaacctg attgccttcc ggcttcacgg catttgctgc tttagcgtcc acataatctg
     5341 tataagcggt cggtgaagta ttttccagct cgacaaaaat attcatatcc ttatggactt
     5401 cttttaaacg agcgagagga ccatcatttt catcgtagcg ggagtggcga cgtcttgtgc
     5461 ctccgtggta ctcagtaaaa gagaattggc gccttcccag ttcccaatct tggcgaacag
     5521 catctgcatc atcaaggttg gcaattctac tgcgaccaat cgggtttaac gctttgcctg
     5581 caataaccca acttttatcg ttgataaatt catcgctttg ataagtgaga tcgccacctg
     5641 ccaagatctg tgccggtaag ctggctttgg tgatattctc ttttaccata cgctctttaa
     5701 tccacaaatt ccagaaatgc gggtattctt ggcttaaatt cgctttattg tgctttgcaa
     5761 tcgcttcatc taatgcttga atattggcac catattttgc ttcccaatca attaacggtt
     5821 ttaatagcac ataacgctga taagccgctt ctgccgcttc ataggctttc agttccgctt
     5881 gatatgtttg tagtcgtttt tggtattggg cttccgtttc cgtagagcct ctaacaggtt
     5941 caatcggtct tgccggaacc accggtgcaa tgccttgccc ttgttccttc tgtaattttt
     6001 cctgctctgc ctcacttaaa tgctgattcg ctaaatcttc ttcattcatt gcttgaataa
     6061 tttcaggcgt catttccggt gcatcttcag ctggtggtgt taaattaaac cacgtccata
     6121 ctgggttatc ttttttataa ttacctgcag gtaatagagt acaatctaca ctttcatcat
     6181 tcgcacagct ttgagcatag ggttttgcca atacggtcgt ggcattcagc tggctaatat
     6241 cggtaattac cggcaagttt gcttcatcat acttttgcca atagctccac gttttgcgat
     6301 agtagccttt gcggagttga ttcacattaa ttgtcggcaa atgcccgtta tcatatacat
     6361 cacttccacc tcgattatgc ttatctcttg gcaaaataaa atgttcgttc acagtttggc
     6421 gatcagtggt ctccaattcc gaacgataat gactatttac attcgctacc ttatccgcat
     6481 tcaactgaat acgcccttca gcttcaataa tactgctgcg gttatgtagc tgccctgcgt
     6541 tgccaataac ggtatcttgc tcatttaatt gacgtccaat cgctatctct cctccgctat
     6601 atattaatga accgcttttc ttattcgctt cataaactag ggtattattt tcaattactt
     6661 tagccgctaa accgagagat tgacgagcag caatagtggc agaggtcccg tctttatctt
     6721 gatttagtat cctctccgca cctaacgcca ccttatcgcc ataaatattc cctgtgccga
     6781 tattgtggat ttcttgagct ttaatcacag tttgagcgtt atcgttgtcc gagcggctat
     6841 tgattaagcc ttcgttatag acggttgaag ttgcagtcaa acgggtatct gccgagctta
     6901 ttcgggcatt ttgtgcattg gttatttggt ttgccgtgag ctgcaagcgg tcatttgcgg
     6961 ctaatttttt gcgattgaga atatcgccct cagtctgaat aatcatcgac ctattcgcat
     7021 tgatatcttt ggtaatatca aagttctctt gcaaattcag gcgaatatcg cctgcttgta
     7081 catcaccatc accggataac gctttggcag tgatctccaa accattattt gcagaaactt
     7141 ttccctcggt attcgtcatt gtgagtgatt ttccgccgaa aatagccaga tcgccccaac
     7201 ttaaaatttc cccattacgg ttatttaagc tgtcgctgag ggtaaatcgt gctgatgagc
     7261 cgatataaat accgcctttt tcattattga gctgttttgt gctgttcagt acaaactgcg
     7321 atgcaataat cccctgtatt ggctgaggtt ggcgtgccaa ggtaccttga ttttccacct
     7381 cgaaactgtt catcgtaagt gagccacctg cttcaataag tgagccattt tccgagatcc
     7441 gattatttaa gacagtcggt acattgagcg tgatatctgt ggccgatttc agtaccccac
     7501 cttggttatc caaaagcgtg ctatttaggg tgagatttcc cacactttga ataacaccgt
     7561 gccgattatc tacttgttgg gaaaccgtga gcgctaactc ttttactgaa ctaatttctc
     7621 cctgctcacg gttatctaag gattgagcgt taatcgcaac accgctggcg gaaattcgcc
     7681 cgccttgatt ttgcagttcg ctagttatat caagggtttg ctccgtttga gaggtgatca
     7741 cccccgattg attttttaac gtattgaccg taatcgcctg tttttcgcca ctcaaaatca
     7801 gaccttgctg attattcagc aatggagcac gaatagataa ctcgcctttt gcaaccaatt
     7861 tgccatcgac tgaatccaca gcatcattta aatttagccc taaacgcttg ccactactta
     7921 atagcccttg gttatttgtt aaacgattac cgtcaatctc aaaatgtcca cccactgaaa
     7981 agcgagccga gtcagtatgg atactctctg cttttaggcg aaaatcctgc tcaccagtct
     8041 gcttccaaac cgagccacga gcatttaaat tcgcttgttg ggcctcaatc acctctgcgg
     8101 ttagctggct tccttcagtg gaaagccatt ttggggtggt gagcttgatc tgatttgcac
     8161 taaactgcgc actattcgcc tgaatatcgc ccgattttgc actgtattca acggtatggg
     8221 cattattttg gctctgattg gcatcaatct cagctgccgc cacgttaatt ttccccgaag
     8281 cgatattttt tccctgcaca gtggtttttt ctggggcagt gagttgaata gttttccctg
     8341 ccacagattg agcttccagc ttccgtactt caccttgtgc agtgtcggtt acgtccaccc
     8401 cagcggcaat cagtgagttt ttgtcggcgt gaatttggcg ggcggtgtag gtgatattgc
     8461 cttttgcgac cgtttcgcca ctttgctgga ttttagtttc ggcttttttc tgaatattgc
     8521 cacccctcgc cacgatggaa ccgctatttt gaatatcggc tttcgagtta agctgaatat
     8581 tgccctgttt attttcaatt ttgccttggt tgtcaatccc gtgttgggca ttgagttgca
     8641 cttgtctttg agcgttgaac gtgccgctgt ttacaatccg cccttgactg tcaatggtga
     8701 gcgtatcggc acttgcaccg atatgcccag cgttacgcac gcccacgccc tgttccgtac
     8761 caatcaggtg gattttgccg gcatacattc cgcccagctc acccacatca atcgcaactg
     8821 tgggcttttc ttcccctgca agcggttgat ttgtatgaat aatttgcaaa ttgttgtccg
     8881 aatttgaccg cttgacggtg tttttgccgg taatgacttt agtctctttt ttcgaccaga
     8941 caccggcgtt gattttcgct tctcgggcga ggatatcggt gtaatccact cggctgttgt
     9001 ccagcccttt gccagcaacc gttaccttgc ctttttccac tacaaaacct tctaaattgc
     9061 cttgatttat ctgtggtttt ccggtggtca gcgtggctcg gtcggcgttg ataataccgc
     9121 agccgtcaca gtgcaagccg ctcgggttgg cgataatcac ttccgctttt ttgccagcca
     9181 cttccacata acctttcatt accgaaggct tactggaatt gacttcattt aaaatcacct
     9241 tcgcttcgcc acgggcaaga tacgggttgc cttgcaccat accggcttgt tgggtggcgg
     9301 tgttggtgcg gctgttgttg agaattgccc ccttctccgc tacgtcaaat tggctgtatt
     9361 tattgtggga aagcccttta tcgttcgggg tttgaatatt gatttgtggc agcccgttgg
     9421 cggtttgcaa aataatcggt tgctgatttt tcggggcagt gctatcggct tgaataatca
     9481 aagtttccgc catagcgttg tctgataagg taacgaatcc caacgcacag aacaagctga
     9541 acgcaagcgg tcgaattttg caaatttttt gtaaaattgc accgcttgtc atactttcac
     9601 tttctgattt acctgctaat tttgctaatt cagataccac cacaatacgt tgtaaggtct
     9661 tgctgaaaat agtgcgaaaa caatgcttat tcataataat tccttaatag cacaatatac
     9721 ttaatacaat atgcccaatc attcattaaa aattgtaacc aatattaaaa ccggcaacgg
     9781 tgtctgaggt tttaaaccct tccggttttc gcatcggtct accggcaaac acgtcataac
     9841 taaatccttt aactccaccc cgaaacccaa tggctgttcc cattaaatga tgtccgagct
     9901 gattttccgt tgcccaaccg gacactcgac caccatctac cgcccaataa aaagcgtggt
     9961 tcggattaaa ttgccagctc aactcattac gccagttcca gccccgctca ccggaaagag
    10021 tcagttcacc gtcaaatcca cgtatggtgt aacgcccgcc aatcgaaaaa cggtcttgcg
    10081 gaaccagagg ggttttattc cattgggcat ttaggctact ttgccactgc catggctgct
    10141 tgccccaaaa aaacggtttc gtcaggcttg cacttgccgt gatgatttta gggcgagaag
    10201 tcccttcgcc ataatcttcc tcgggagcag ataatgcccc tcgtgctgcc gtacctcgtt
    10261 tgaaattagc cgaaagctca agcgtagcgg tcgggaaata ttctttatgc gaaaaacccg
    10321 cttcccaacc tgccattcgg cgtttttgta cttcaatttc tgagccgtca atatagtttt
    10381 gcgactggcg tggccaaagt gaaccggaca agctcgtttt acgtttggca tcacgataaa
    10441 gcaaataaga aaaggttaat ttatcggtat cactttcacc ggcgtagaga tagctcttgt
    10501 caaaggcacc aaatacttct tgatgataac gatgatgagt gtgtgaaaat gctaactgcc
    10561 aatagccaaa cggcacggaa tagtaaagcg tgagattttt actggcacgt ctgccgttat
    10621 catcaccttt ttgtttcatc gaatgggtaa aagaggtata gaacaggtca tttgccgaaa
    10681 aaatattatc tatagacaga gtggcggagg tttgtaattt gcctgtggat ttcgagccgg
    10741 catcgtccag cccaagattt aagcgaaatg gaaacgcttg cgaatagctg atttttaaat
    10801 cactgtctcc cacctccgct ttttcgcttg agctgggtaa aatctcaata tttgcctccg
    10861 ccgtcggcac ccgttttaga ttttccagag actgctcaat atctcgcaca ttcagaatat
    10921 cgccttcggc aaaagtaaaa ccggttaagg cgtgcagctt ggtaaaacgc ggtactttgc
    10981 cgctatctac cactaaagta ttgcgtattt tgcccggaat cacggttaaa actaattttc
    11041 cgccacgtaa atcttgctcc gcagtaacca ctcgtgtagt gacataacct ttgccaataa
    11101 tttcattttg gatttgcttc atcaacacag ctaacccttc accaccaaag cagtgaggta
    11161 atgtcaaatg aaatgatttt actgcttttt caaacgccca ttggaattgg ctggtagtca
    11221 gagaattgtc aggagaatag tcaatgagag tgatttgatg aatggggtaa caaggcaatt
    11281 cgtgattgga aagagtaagt gtatcattga tttgtgtctc gagccgtaca tcagctttcg
    11341 gctggaattt ttctgcttga ttttgttggt attgctgtta gcgatgttgc tgggcagcat
    11401 caatttgttg ttgagttgca tcaatgcgtg cttgttgtac aaggcttgaa gaatttgctt
    11461 cagcaacaaa agaagcactt aacaataccg tgcttaaaat cagattttgt ggggttttca
    11521 taagatcaaa taagtaagac attcaacgtt tttagtctat aaaaatttat gttgttttgc
    11581 aaactccgtt ttatggagct ttatacatat ctgacgactt tggtttttta tgctattatc
    11641 tccgccattt ttatactata gagaatagaa taaccgtgtt agtttcagat tttcatttca
    11701 acttacccga tgagctgatt gctcgctacc cgactgccga acgctctgcc agccgtttat
    11761 tacacttaaa tggcgaaaca ggcgaatttg ccgatcaaca atttgtggat ttatacgatc
    11821 atatcaacga aggcgatcta ttgatcttca ataacactcg agtgatcccg gctcgccttt
    11881 acggtcgaaa acctagtggc ggcaaagtag aggcattagt ggaacgggtg ctagatgaac
    11941 accgctgctt ggctcacgtt aaagcctcaa aagcaccgaa agaaggggct gaattgatct
    12001 ttggggaaga taagctaggt gaaggcaaag gctttacggc gacaatggta gctcgccacg
    12061 atactctgtt tgaattggtg tttaacgaag agcaaccgtt attcgaattg ctacagcaag
    12121 ctggtcatat gcctcttcca ccttatatcg accgccccga tgaagatgct gaccaagagc
    12181 gttatcaaac cgtttatagc aaagtgttag gtgcagttgc cgcccctacc gccggtttgc
    12241 attttgacaa tgcaatgctt gaaaaactaa aagcaaaagg ggtggatact gccttcgtaa
    12301 cattgcacgt tggtgccggc actttccagc cggtacgggt agaaaccatt gaagatcata
    12361 aaatgcacgc cgaatatgcc gaagtgagcc aagaagtagt cgataaaatt ctcgcaacga
    12421 aagccaaagg aaaaagagtg attgcaattg gtacgacatc agtacgttcg gttgaaagtg
    12481 ccgcccaagc ggctgaaaaa gatgggaaat tgattgctcc gttcttttct gacaccgcta
    12541 ttttccttta cccgggaaaa acctttaaag tcattgatgc gttagtcacc aatttccatt
    12601 taccggaatc cacgctaatt atgttagtct cagcatttgc cggctataga aatacgatga
    12661 atgcctacgc ccacgcagta gaaactaaat accgtttttt cagctatggc gatgcgatgt
    12721 ttatcaataa aaacccaaat gcgttgagtg atgttcctta atttatgagg gttataaggg
    12781 aataacatta tgaacaaaaa caatcttcca accattttaa gggattgttt tcaatatatt
    12841 caataatttg gaagtacgat gtttcattac gaataatgtg ttcataataa ttcctttgcc
    12901 aaatttcaga aatatcggta ttttgacgaa cccatttagt tacgccaatt ttaaaaccac
    12961 gcacaataga gccgattgtt cgtgatgttc cccgtaaggg cgaaacattt ttcgccctta
    13021 tacatggggc aaatgatgat ttgcccctac agtttcgacg atttcaataa tgccatgtaa
    13081 atgattaggc ataatcacaa agctatgcaa gcttacattt ggaaaatgat cgggtatatc
    13141 ttcccaacat tgacgtacaa tattccctat cttattaagc ctcatttcat catcaacaat
    13201 ctcaccgaga aaatggtgtt tatttttaca acaaatagta atgaaataga atccttgtga
    13261 tcggtaatca taatgcttta gacgaattga acgcctccta tgaatctccg gctgatattt
    13321 ctgcattttt cttattcctt aataaaactg cttataccaa ggggaaaatg ccccccttgc
    13381 ctgctcaatt tcaatagaac ttgggtaaaa ttttactctt atcatt
//
LOCUS       DANLZQ010000080        13378 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.080, whole genome shotgun sequence.
ACCESSION   DANLZQ010000080 DANLZQ010000000
VERSION     DANLZQ010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13378)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13378)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13378
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.080"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            376..1020
                     /gene="rppH"
                     /locus_tag="PXE50_001883"
     CDS             376..1020
                     /gene="rppH"
                     /locus_tag="PXE50_001883"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HDL5622768.1"
                     /translation="MIDFDGYRPNVGIVICNKHGQVLWAKRFGQNSWQFPQGGINEGE
                     NIEAAMYRELYEEVGLSKKDVRLLWASKYWLKYKLPKRLVRNEGSGPVCIGQKQRWFL
                     LQLIGDESLINLKTTKNPEFDGWRWVSFWYPVRQVVSFKRDVYRKAMKEFAQVLQNNI
                     QKATDDKTGEKPRIERGETSPHTYKKTSQDSAKAYKREARKPYRPWHQHNQKGK"
     gene            1022..1810
                     /locus_tag="PXE50_001884"
     CDS             1022..1810
                     /locus_tag="PXE50_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDL5622769.1"
                     /translation="MTILLSCLFLGVFVGFLAGLFGIGGGLIIVPSLVFLLPMAGVPP
                     EYIMSTALGTSFSTIIITAFASAQRHHKLGNVDIQTSKYFIPALMVSVFLSGLVVSRL
                     DPQLMSRIFAVMVLYLAGKMIFSIKRAPKNKPLTVQTTIIGGSIIGALASMAGIAGGA
                     FIVPFLNDRGLEMKRAIGTSSFCGAFLGLSGTISFIVSGWGLEGMPDYSLGYVYLPAL
                     FGITATSFFTSKMGASAANALPVPMLKKAFAVLLVCIAINMFLK"
     gene            1818..2615
                     /gene="lgt"
                     /locus_tag="PXE50_001885"
     CDS             1818..2615
                     /gene="lgt"
                     /locus_tag="PXE50_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HDL5622770.1"
                     /translation="MNEQFIQFPQISPIVFEIGPIALRWYGLMYLAGFAFAYWLGMRR
                     AKNSNGVWTTEQVDSLVYTCFWGVVLGGRIGDVFFYSFDRFLQDPLYLFRIWEGGMSF
                     HGGLIGVIVAMIWVSYRQKRNFWQTADFIAPLVPFGLGMGRIGNFINDELWGRVTDVP
                     WAVLFPSGGYLPRHPSQLYEAFLEGVVLLFILNWFIQKPRPAGAVSGLFLIGYGTFRF
                     IVEYFREIDHNVNTTADLITRGQLLSLPMIIGGILIMAWAYKVNKVK"
     gene            2702..3370
                     /locus_tag="PXE50_001886"
     CDS             2702..3370
                     /locus_tag="PXE50_001886"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HDL5622771.1"
                     /translation="MSKKYKVIGFDLDGTLINTLPDLTLVANSMFLEAGLPTVTQEKV
                     LTWIGKGADIFFQNAVAHTGRIFQADELVKMRVSFDKYYATYVCEESTLFPNVKETLE
                     ILKANDYPLVVITNKPTKLVEPVLSAFGIYHLFDETLGGQSLPKIKPHPDPMFFICEK
                     FGITPSELLFVGDSENDVIAAKAAGCDVVGLTYGYNYNVPIEQSNPTFVTSEFKDVLK
                     IVGL"
     gene            3440..3700
                     /locus_tag="PXE50_001887"
     CDS             3440..3700
                     /locus_tag="PXE50_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HDL5622772.1"
                     /translation="MPTIALRQVGGSVAMVIPPAFLEALKLSVGSKVDLSLNDNQLVI
                     NPARPKVKYSLEELLRQSDFEAARNEESQSWLSEPAIGKEIL"
     gene            3697..4029
                     /locus_tag="PXE50_001888"
     CDS             3697..4029
                     /locus_tag="PXE50_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HDL5622773.1"
                     /translation="MKRGDIYWLDLDPTLGHEQSGFRPVVIVSVTAFNLASKLPVVVP
                     ITNGGAFAERLGFAVSLKDAGLKTTGIIRCDQPRTVDIAQRHGKFIEALPESLLDEIM
                     ARVSVIFE"
     gene            4156..5187
                     /gene="trpS"
                     /locus_tag="PXE50_001889"
     CDS             4156..5187
                     /gene="trpS"
                     /locus_tag="PXE50_001889"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HDL5622774.1"
                     /translation="MSKPIVFSGVQPSGELTIGNYLGALRNWVKMQDDYDCVYCIVDQ
                     HAITVRQDPESLRKSTLDVLALYLACGIDPNKSTIFIQSHVPEHAQLAWVLNCYTYFG
                     EMGRMTQFKDKSARYEENVNVGLFTYPVLMAADILLYQANQVPVGDDQKQHLEITRDI
                     ANRFNALYGKKDSEGNLIEPVFAVPEVFIAKSGARVMSLLEPTKKMSKSDDNRNNVIG
                     LLEDPKAVAKKIKRAMTDGDEPPVVRYDVQNKAGVSNLLDILSAITGKTIAELETEFE
                     GKMYGHLKTEVADKVSELLTNLQERYHHYRQDEALLEKIYREGAEKARAQAKATLDKV
                     YELVGFVRY"
     gene            complement(5251..6006)
                     /locus_tag="PXE50_001890"
     CDS             complement(5251..6006)
                     /locus_tag="PXE50_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HDL5622775.1"
                     /translation="MKFIKKLSYSVFLATVITACATTESINQEAAQSYAQVKTQARQQ
                     NAIDNSSATAKRIHTVFHKMKPYAERANQTGVPFHWEITVLKSDELNAWAMPGGKMAF
                     YTGLVERLNLSNDEIAVVMGHEMAHALKEHGKSDRTVSAITSIVGAIADVAVTASTGV
                     STEGLLSTGVDLIATKPFSRSQETEADEVGLILMAESGYNPSAAPNVWVKMSKANGDS
                     GLSIFSTHPSNADRQENLARLVPEAMKIYNARK"
     gene            complement(6062..6589)
                     /gene="ppa"
                     /locus_tag="PXE50_001891"
     CDS             complement(6062..6589)
                     /gene="ppa"
                     /locus_tag="PXE50_001891"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010944216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HDL5622776.1"
                     /translation="MGLELVPAGKELPDDIYVVIEIPANSDPIKYEVDKETGALFVDR
                     FMATAMFYPANYGYVNNTLSSDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGG
                     DAKVVAVPHTKLSKEYDHIKDVGDLPALLKAQIQHFFESYKALEAGKWVKVEGWGDVN
                     EARQEILESFERAKK"
     gene            6806..6881
                     /locus_tag="PXE50_001892"
     tRNA            6806..6881
                     /locus_tag="PXE50_001892"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6839..6841,aa:Lys,seq:ttt)
     gene            6904..6979
                     /locus_tag="PXE50_001893"
     tRNA            6904..6979
                     /locus_tag="PXE50_001893"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6937..6939,aa:Lys,seq:ttt)
     gene            7001..7076
                     /locus_tag="PXE50_001894"
     tRNA            7001..7076
                     /locus_tag="PXE50_001894"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:7034..7036,aa:Lys,seq:ttt)
     gene            7169..8203
                     /gene="mltG"
                     /locus_tag="PXE50_001895"
     CDS             7169..8203
                     /gene="mltG"
                     /locus_tag="PXE50_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HDL5622777.1"
                     /translation="MLKKILIALGLAGVIACGGLFYGYQKLTSLAEHPITVQPNQLFV
                     LEKGVSSQKLAALLEEQGIVTHDDADLIPYLMRLYPELSKFKAGAYSLAGLTTVKDLL
                     AHLSSGKEVQLNVQFIEGKTFKIWREQLAKADYLQHTLQGKSEKEIADLLGIPHEKIE
                     GWIAPDTYNYTPNSTDLALLKRAYQKQKTALEQAWKNRAENLPLATPYEMLILASIVE
                     KETGIATERPQVASVFINRLRNNMRLQTDPTVIYGMGDRYNGNIRRKDLEEATPYNTY
                     QIDGLPPTPIAMPSEASIKAVANPDNTPYLYFVADGTGGHKFSKTLNEHNKAVAEWIQ
                     IERKRKNEQK"
     gene            8214..8834
                     /locus_tag="PXE50_001896"
     CDS             8214..8834
                     /locus_tag="PXE50_001896"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HDL5622778.1"
                     /translation="MRGKFIVIEGLEGAGKTTAHQVILKELEQAGINDVVMTREPGGT
                     PLAEKLRHLIKHETEEAINDKAELLMLYAARVQLVENVIKPALAEGKWVLGDRHDMSS
                     QAYQGGGRKLDRHLLETLKESVLGTFEPDLTIYLDLDPVIGLERARGRGELDRIEQQS
                     LDFFYRTRERYLELTQHNDKAVIINAEQPIEQVTADIQQVIRNWLK"
     gene            8834..9811
                     /locus_tag="PXE50_001897"
     CDS             8834..9811
                     /locus_tag="PXE50_001897"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HDL5622779.1"
                     /translation="MYPWLESTYQQLTDSFLQGRGHHALLFKTDVGLGTDTLIYKVAE
                     WLLCSQKLRHQPCLECKSCLLMQSNNHPDFHILEPIEDKDIGIDQVRELIYKLQNFAQ
                     QGGNTVVYIRGVDRLTEASSNALLKTLEEPRENVYFLLEAPLQATVLATIQSRSQTWV
                     LYAPQASEVMAWLQTQFPAISTDDLEIALRLCHSRPLICKNFIENDRLQQRKTFLQTF
                     WRFYKSHDVFLLFQAFAQEKELILQQLEWLESFFSDALKAKMAISHGWLNPDLQNGIL
                     PFSQQLTTHGLLKGHQILQQTQRDLTEINAVNPELMLLDCLTKLVLVFE"
     gene            9942..10184
                     /locus_tag="PXE50_001898"
     CDS             9942..10184
                     /locus_tag="PXE50_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ParD family
                     antitoxin"
                     /protein_id="HDL5622780.1"
                     /translation="MARTTSVTLGEPLNDFVNEMVASGRYGSTSEVVRTALRMLEEKE
                     QYLAQLRQAIDDGDASGYATETIDEMMLRVKAELNV"
     gene            10177..10461
                     /locus_tag="PXE50_001899"
     CDS             10177..10461
                     /locus_tag="PXE50_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5622781.1"
                     /translation="MYKLSAQALRDQEKLFRYSISQFGVQQTESYFADLKHILNLLAD
                     FPTMGTSAEYIRGGLRMHTHQSHTIYYRIKADHIFIVRILHNQMNHKRYI"
     gene            10466..11254
                     /locus_tag="PXE50_001900"
     CDS             10466..11254
                     /locus_tag="PXE50_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchF/TatD family DNA exonuclease"
                     /protein_id="HDL5622782.1"
                     /translation="MKDLFIIDSHCHLDSLDYETRHKNVDEVIENAKARGVHHFISVC
                     TTVGRFEAMKNLTAHRNDVSLSCGVHPLNVEDEPFDYDKLFQFAQDPKVVAIGETGLD
                     YHYTPETKALQQSLFVQQIEIANKLNKPLIIHSRSARQDTMDMLEQNNAEKCGGVLHC
                     FTEDWAMAKRALDIGFYISISGIITFRNAEELREVVRKVPLDRLLVETDSPYLAPIPY
                     RGKPNQPAYVRETCEYVATLKGVSTEELARITTENVQHLFNIKL"
     gene            11264..11785
                     /locus_tag="PXE50_001901"
     CDS             11264..11785
                     /locus_tag="PXE50_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1523 family protein"
                     /protein_id="HDL5622783.1"
                     /translation="MRAILKYFLILVSLSFFIVLGGAVNYAMPSYEDTVVTGMEVRRM
                     DKDGIISKANPADGEVRDVYFLFTEDPETKKVMVYRNEDTGWGLPPYFKFGSADIQAK
                     AQAYANEKQRVQIKYYGWRINWLNEFRNIVSIKPLEEAETVSKPIMSYVLYAVLAFLF
                     FLSVQFIRGIFKD"
     gene            11860..12561
                     /gene="lpxH"
                     /locus_tag="PXE50_001902"
     CDS             11860..12561
                     /gene="lpxH"
                     /locus_tag="PXE50_001902"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HDL5622784.1"
                     /translation="MTYYFIADLHLNENQPEITHLFLQFMQEKALLAEAVYILGDLFD
                     FWIGDDEQSELISTVKQAIKTLTTSGTKCYFICGNRDFLIGKRFSEQTGMVILPDYHV
                     IDLFGTSTLLCHGDTLCTDDVKYQQFRKKVHQKWRQAIFLMFPLSWRIRIAEKIRSKS
                     KQEKRDKSAEIMDVNAEVTAQIVAKYNTTQLIHGHTHRQAIHQHNGFTRIVLGDWKEN
                     YASILSVTEQGAEFI"
     gene            12558..13348
                     /locus_tag="PXE50_001903"
                     /pseudo
     CDS             12558..13348
                     /locus_tag="PXE50_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618283.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
BASE COUNT         3973 a         2846 c         2782 g         3777 t
ORIGIN      
        1 tttgagttat tcacgcctaa tttgaaaaac tatcacatct ttatccacaa atggtgggga
       61 taactctgct ttatttgcga agcaaaaatt gccctgctta ttcattttaa aatttaaact
      121 tattttgacg agaaaaaacg caacaacttg atctttatcc agatcattgc ttaagaaaaa
      181 gatcgcattt ttagatctga ttaattgctc tgttttacaa cgttccgcct gtttatcctc
      241 aacttatacc acttatattc aatagttatc cacaaagtta ttcacaagcg gttatatttt
      301 atggtttttt tgcaaatcaa cccaaagtat gaaacaattc tcccattcta gaatttttat
      361 caattaggtg gtcgagtgat cgatttcgat ggctaccgcc caaatgttgg aatcgttatc
      421 tgtaataagc acgggcaagt tctgtgggca aaacggtttg gtcaaaactc ttggcaattt
      481 ccgcaaggtg gaattaatga gggggaaaac attgaagcag caatgtaccg tgagctttat
      541 gaagaggtcg gcttaagtaa aaaagatgta cgattgcttt gggcgtctaa atattggcta
      601 aaatataaac tgccaaaacg cttggtacgt aatgaaggct ctggtcctgt ctgtatcggg
      661 caaaaacagc gttggtttct actgcaatta atcggtgatg aaagcctgat taatttgaaa
      721 accacgaaaa atccggagtt tgacggctgg cgttgggtca gcttttggta tccagtccgc
      781 caagtggtct cttttaaacg agatgtttat cgcaaagcga tgaaagagtt tgcacaggtt
      841 ttgcaaaaca atattcaaaa agcgactgac gataaaaccg gtgagaaacc acgcattgag
      901 cgtggcgaga cttcgcccca tacttataaa aaaacctctc aggattctgc caaagcctat
      961 aaacgagaag ctcgtaagcc ttatcgtcct tggcatcaac ataatcaaaa aggaaaataa
     1021 gatgactatt ttattaagct gccttttttt aggggtgttt gtcggctttt tagccggctt
     1081 gttcggcatt ggtggtgggt taatcatcgt gccgagtttg gtcttcctac tgcccatggc
     1141 aggtgtaccg ccggaatata taatgtccac cgcactcggc acatcatttt caaccattat
     1201 tattaccgcc tttgcatcgg cacaacgcca tcataagtta ggcaatgtcg atatccaaac
     1261 cagtaaatat tttattccag cgttgatggt ttcggttttt ctatcgggct tggtggtaag
     1321 ccgcctcgat ccgcaactga tgtctagaat ttttgcggta atggtacttt accttgcagg
     1381 taaaatgatt ttttcaataa aaagagcacc gaaaaataaa ccacttaccg ttcaaacgac
     1441 gataatcgga ggttcaatca tcggtgcgtt agccagtatg gcagggatcg caggtggagc
     1501 ctttattgta ccatttttaa acgatcgagg cttagaaatg aaacgtgcca tcggcacttc
     1561 ctcattttgc ggagcatttt taggtttatc tggcacaatc agctttattg taagtggctg
     1621 gggcttagaa ggaatgcctg attattctct cggttatgtt tatttaccgg ctctgtttgg
     1681 tattacggca acttcatttt tcacctcaaa aatgggggca agtgccgcca acgctctacc
     1741 tgtgccgatg ctgaaaaaag cctttgcggt gcttttggtc tgtatcgcca tcaatatgtt
     1801 tttaaaataa ggacactatg aacgaacaat ttatccaatt tccacaaatt agcccgattg
     1861 tgtttgaaat cggtccgatt gccctgcgtt ggtatgggct aatgtattta gccggctttg
     1921 cctttgccta ctggctggga atgagacggg cgaaaaattc caatggagtt tggacaaccg
     1981 agcaagtgga tagcttagtc tatacttgct tctggggcgt agtattaggt gggcgtatcg
     2041 gcgatgtgtt cttttatagc ttcgaccgtt tcttacaaga tccgctctac ctctttcgca
     2101 tttgggaagg cggaatgtcc tttcacggcg gtttaatcgg cgtcattgta gcaatgattt
     2161 gggtttccta ccgccaaaaa cgcaatttct ggcagacagc agattttatc gcaccgctag
     2221 taccgttcgg gctaggtatg gggcgtatcg gcaatttcat taacgatgaa ctttgggggc
     2281 gtgtaaccga tgtgccttgg gcggtgttat ttccaagcgg tggctatctt ccccgccacc
     2341 cgtcacagct ttatgaagcc tttttagagg gtgtggtgtt actctttatc ctcaactggt
     2401 ttattcaaaa gcctcgcccg gcaggtgcgg tttcagggtt atttttaatc ggctacggca
     2461 cattccgctt tattgtggaa tacttccgag aaatcgacca taacgtcaat accaccgcag
     2521 atttaatcac tcgtgggcaa ctactctctt taccgatgat tatcggcggc atactgatta
     2581 tggcgtgggc gtataaagta aacaaagtga aataaacgta ggggcaagtc aatatttgcc
     2641 ctcattacaa aaattgcaaa aaatttgcag aaaacgaccg cttgtgtttg aaggatatac
     2701 tatgagtaaa aaatacaaag tcatcggttt cgacttagac ggaacgctaa tcaacaccct
     2761 ccccgatctc actcttgtcg ccaattcaat gtttctagaa gccggtttgc caacggttac
     2821 acaagaaaaa gtgctgactt ggatcggtaa aggggcagat attttcttcc aaaatgcggt
     2881 tgctcacacc ggcagaattt tccaagccga tgagttggtg aaaatgcgag tgagctttga
     2941 taaatactac gccacctatg tgtgcgagga aagcaccctt ttcccaaatg tgaaagaaac
     3001 cttagaaatc ctcaaagcaa acgactaccc gctggtggtg attaccaaca aaccgaccaa
     3061 attagtcgag ccggtgcttt ccgctttcgg catttatcat ttattcgatg aaacccttgg
     3121 tgggcaatcg ctccccaaaa tcaaaccgca ccctgacccg atgtttttta tctgcgaaaa
     3181 attcggcatt accccatcag aattactttt tgtcggcgac tcagaaaatg acgtgattgc
     3241 cgccaaagcc gccggttgtg atgtggttgg actaacttac ggctataact acaatgtgcc
     3301 gattgaacaa tctaacccga cttttgtgac atctgaattt aaagatgtgt tgaaaattgt
     3361 ggggttataa agaaaacatt tgttttcttt tgatgtttgc tttagacttt ccgaacctaa
     3421 agatttaaag gagtaaagta tgccaacaat cgcattacgt caggtcggtg gctcggttgc
     3481 aatggtgatt ccgcctgctt ttttagaggc actcaagctc tccgtcggta gcaaagtgga
     3541 tttgtcttta aacgacaacc aactcgtgat taatcctgcc cgcccaaaag tgaaatacag
     3601 cttagaggaa ttattaagac aatccgattt tgaggcagca aggaatgaag aaagccaatc
     3661 gtggttatcc gagccggcaa taggaaaaga aattttatga aacgtggcga tatttactgg
     3721 ctcgatcttg atccaacctt aggacacgaa caatcaggct tccgccccgt tgtaattgtt
     3781 tccgtaactg catttaatct agccagtaaa ctgcctgtgg ttgtgccgat tactaacggt
     3841 ggagcttttg ctgaaagact gggctttgcc gtttcattaa aagatgccgg cttaaaaaca
     3901 acagggatta ttcgatgcga tcaacctcgc acagtcgata ttgcacaacg ccatggaaaa
     3961 tttatcgaag ccttacccga aagcctactt gatgaaatta tggcaagggt ttcagtgatt
     4021 tttgagtaag atacaagcgg tctgatttgc tctatttttt gcaaaatcat caataaatct
     4081 gaccgcttgt acttttatcc cttcccaata accgttaaga taacctatat ttttcaaatc
     4141 aaacgagaag ataaaatgag caaacctatt gtatttagtg gcgtgcagcc ctcaggtgaa
     4201 ttgactatcg gtaactactt aggggcgtta cgcaactggg tgaaaatgca agatgattat
     4261 gactgtgtat attgcattgt cgatcaacac gccattaccg ttcgtcaaga tccggagtcg
     4321 ctacgcaaat caactttaga tgtgttagcc ctgtatttag cttgtggcat tgatccaaac
     4381 aaaagcacta tttttattca atcccacgtg ccggaacacg cccaattagc ttgggtgctg
     4441 aactgttaca cctatttcgg tgaaatgggg cgtatgacgc aatttaaaga taaatcagca
     4501 cgctatgaag agaatgtcaa tgtgggctta tttacttatc cggtattaat ggcggcagat
     4561 attctgcttt accaagccaa ccaagtgccg gtaggcgatg accaaaaaca acatttggaa
     4621 atcacccgtg acattgccaa ccgtttcaat gccttatacg gcaaaaaaga ttccgaaggc
     4681 aacctgatcg agcctgtttt tgcagtgccg gaagtcttta ttgcgaaatc cggggcaaga
     4741 gtgatgtcgc tacttgagcc gaccaaaaaa atgtcaaaat cggacgataa tcgtaacaat
     4801 gtgattggac tattggaaga tccgaaagcg gtagcgaaga aaatcaaacg ggcaatgacc
     4861 gatggcgatg aaccgccagt agtgcgttat gacgtacaga ataaagccgg tgtctcgaat
     4921 ttattggata ttctctccgc cattaccggc aaaaccattg ccgaattaga aaccgaattt
     4981 gaaggcaaaa tgtatggtca tttgaaaaca gaagtagcag ataaggtttc cgaactatta
     5041 accaatctgc aagaacgtta tcaccactac cgccaagatg aagcattatt ggaaaaaatc
     5101 taccgtgaag gggcagaaaa agctcgagct caagccaaag caacgttaga taaggtatat
     5161 gaattagtcg gttttgtgcg ttactaacac ttaatgaaaa atgctcttga ggattcaaga
     5221 gcatttttgc aaaaaagaac cgattgtcaa ttatttacgg gcgttataaa tcttcattgc
     5281 ttccggcaca aggcgggcta agttttcttg acggtcagca tttgatgggt gagttgagaa
     5341 aatggacaag cctgaatcgc cattggcttt actcattttt acccaaacat tcggcgctgc
     5401 tgatgggttg tagcctgatt ctgccattaa aattaaccca acttcgtccg cctcagtctc
     5461 ttggctgcga gagaatggct tggtggcaat caaatccacg ccagtgctga gtaaaccttc
     5521 ggtgcttacg cctgttgagg cagtcacagc cacatctgca atagcaccta caatactggt
     5581 aatagcgcta accgtacggt ctgatttacc gtgttctttc agtgcgtgag ccatctcgtg
     5641 tcccattacc actgcaattt catcgttcga taaattaagt ctttccacta accccgtgta
     5701 aaacgccatt ttaccgcccg gcatcgccca cgcattgagt tcatccgatt tcaatacggt
     5761 aatttcccaa tgaaaaggta caccagtctg gttggctctt tccgcataag gcttcatttt
     5821 atgaaaaaca gtgtgaatcc gcttagcggt ggcagacgaa ttgtcaatcg cattttgctg
     5881 acgagcttgg gttttcactt gagcataact ttgagccgct tcttggttaa tgctttctgt
     5941 tgtggcacaa gcggtaatca ctgttgctaa aaaaactgaa taacttaatt ttttgatgaa
     6001 tttcatttta tatcccacaa aaaatgccaa acaaatttgc ttggcattca aaaataaata
     6061 attatttctt agcacgctcg aatgattcta agatttcttg gcgagcttcg tttacatcgc
     6121 cccaaccttc tactttcacc catttgcccg cttctaatgc tttatagctt tcgaagaagt
     6181 gctggatttg tgcttttaat aacgccggta agtcacctac atctttgatg tggtcatact
     6241 ctttacttaa tttggtgtgt ggaacagcaa ccacttttgc atcaccgccg gcttcatcgg
     6301 tcatttttaa cacaccgaca ggacggcaac gaatcaccga acccggttgt aacggatatg
     6361 gtgttggcac taatacatca accgggtcac cgtctgatga taaggtgtta ttcacataac
     6421 catagtttgc cggatagaac attgcggttg ccataaagcg atccacaaat aatgccccgg
     6481 tttctttgtc cacttcatat ttgattggat cagagtttgc cggaatttca attacaacat
     6541 aaatatcgtc cggtaattct ttaccggcag gaactaattc taagcccatt ttggtttcct
     6601 tctataatag gtgaaataaa cggcgtgatt atagcctatt ttcagaaaaa gataaaagcc
     6661 cgtttctctt ttcattttcc gccaacaaat ccggctaatt ttttgctaaa ttgcttacaa
     6721 accgcacact caaccatttt tcgataaaaa aaacttgcca aagttttaaa aatccgtaag
     6781 atatgccctc gttacgcaag attatgggtc attagctcag ccggtagagc agcggacttt
     6841 taatccgttg gtcgaaggtt cgaatccttc atgacccacc attaatcttc aaaacacctc
     6901 taagggtcat tagctcagtc ggtagagcag cggactttta atccgttggt cgaaggttcg
     6961 aatccttcat gacccaccat taatttcaaa actcctctga gggtcattag ctcagtcggt
     7021 agagcagcgg acttttaatc cgttggtcga aggttcgaat ccttcatgac ccaccattta
     7081 ctcaaatccc atttgcaaat ttttctgaaa aaacaaccgc tttatagtag aattcagtca
     7141 atttttatca cttttatttt attcatcaat gctaaaaaaa atccttattg cattaggctt
     7201 agccggcgtt attgcttgcg gtggactgtt ttacggctac caaaaactca cctctttagc
     7261 cgaacacccg atcacggttc agccgaatca acttttcgta ttggaaaaag gcgtttccag
     7321 ccaaaaatta gcggctctgt tagaagagca aggcattgtc acccacgatg acgccgatct
     7381 tatcccttat ttaatgcgat tataccctga gttaagcaaa ttcaaggctg gtgcttattc
     7441 actcgcaggc ttaacgacag taaaagattt gctcgctcat ttaagctccg gcaaagaagt
     7501 gcaacttaac gtgcaattta ttgagggcaa aacttttaaa atttggcggg aacaactagc
     7561 gaaagccgat tatttacagc acacgctaca aggcaaatcg gaaaaagaaa tcgctgactt
     7621 actcggcatt ccacacgaaa aaatcgaagg ttggatagcc ccggatactt acaactacac
     7681 gcccaattcc accgatttag ccttgcttaa acgggcttat caaaagcaga aaacggcgtt
     7741 ggaacaggct tggaaaaata gagcggaaaa tctaccgctt gcaacaccat acgaaatgct
     7801 gattcttgcc tcgattgtgg aaaaagagac cggcattgcg accgaacgcc cacaagtggc
     7861 atcggtcttt attaaccgtt tacgcaacaa tatgcgactg caaaccgatc caaccgtcat
     7921 ttacggaatg ggcgatcgtt ataacggcaa tatccgccgc aaagatttag aagaggcaac
     7981 gccatacaat acttaccaga ttgacggctt accgccaacg ccgattgcca tgccgagtga
     8041 agcttcgatt aaagcggttg ccaacccgga taatacaccc tacctctatt ttgtggcaga
     8101 cggcacgggc ggtcataaat tcagcaaaac actgaatgag cataataaag cggtggcaga
     8161 atggattcaa attgaacgca aacgcaaaaa tgaacaaaaa tagtgagaac aatatgcgtg
     8221 gaaaatttat tgtaattgaa ggcttagagg gcgcaggcaa aacgactgct caccaagtga
     8281 ttctcaaaga gttggaacaa gccggcatta atgacgtagt aatgacccga gaacccggcg
     8341 gcacccccct tgccgaaaag ttacgccatt taattaaaca cgaaaccgaa gaagccatta
     8401 acgataaggc tgagctgcta atgctctacg ctgctcgtgt tcaattagtc gaaaatgtga
     8461 tcaaacctgc ccttgccgaa ggcaaatggg ttctgggcga ccgccacgat atgtcttccc
     8521 aagcctatca aggcggtgga cgtaagttgg atcgtcactt actcgaaacc ttaaaagaat
     8581 cggtactcgg cacattcgag ccagatttaa cgatttatct cgatctcgat ccggtgattg
     8641 gtttagaaag agccagaggc agaggcgaat tagaccgcat cgaacagcaa agccttgact
     8701 tcttctaccg cacacgagag cgttatttag aattaaccca acacaacgat aaagccgtga
     8761 tcatcaatgc cgaacaaccc atcgaacagg tgactgcgga tattcaacaa gtaattagaa
     8821 actggctgaa ataatgtacc cttggctcga aagcacttat caacaactta ccgattcatt
     8881 tttacagggt cgaggtcatc acgccttact gttcaaaaca gatgttggtc ttggtacaga
     8941 caccttaatc tacaaggtgg ctgaatggtt gctttgcagc caaaaactcc gccatcaacc
     9001 ttgtcttgaa tgcaaaagtt gcctgcttat gcaaagcaac aaccaccccg atttccacat
     9061 tcttgagccg attgaagaca aagatattgg tatcgaccaa gtgcgtgagt tgatttataa
     9121 actccagaat ttcgcccaac aagggggaaa tacggtcgtt tatattcgag gagttgatcg
     9181 tttaaccgag gcaagcagta atgccctgct caaaaccttg gaagagccac gtgaaaacgt
     9241 ctatttcttg ctcgaagcac cgcttcaagc aacagtttta gctaccattc aaagccgcag
     9301 ccaaacttgg gtactttacg ccccacaagc ctcagaagta atggcttggc tacaaacaca
     9361 atttccggca atctcaaccg acgacttaga gattgcactc cgcctttgcc actcacgccc
     9421 actaatttgc aaaaatttta tcgaaaatga ccgcttgcaa cagcgaaaaa cctttttgca
     9481 aaccttctgg cgtttctaca aaagccacga tgtcttcttg ttattccaag ccttcgccca
     9541 agaaaaagag ctgattttac agcaactcga atggctggaa agtttcttta gcgatgccct
     9601 aaaagctaaa atggcaatca gccacggttg gctaaacccg gatctccaaa acggcattct
     9661 cccttttagc caacaactaa cgacccacgg cttacttaaa gggcatcaaa ttctccaaca
     9721 aacccagcgg gatttaaccg aaattaacgc cgtcaatccg gaattgatgt tgctagattg
     9781 cctgacgaag ttggttttgg tgtttgagta aaagccctct ctcatagaag gtagctttca
     9841 attagccgta aaaagaggct tctagcccta gaatatagtt tataacttgc aaaattatct
     9901 atctttgtta ttgtatgaat aattcacaca aggagaatat tatggcaaga acaaccagcg
     9961 tgactttagg cgaaccttta aatgattttg taaatgaaat ggtggcaagt gggcgttatg
    10021 gctctaccag tgaagtagtg agaaccgctt tacgaatgct tgaggaaaaa gagcaatact
    10081 tagctcagtt gcgacaagcc attgatgatg gtgatgctag tggttatgca accgaaacga
    10141 ttgatgaaat gatgttgaga gtaaaggcgg aacttaatgt ataaactttc tgctcaagca
    10201 ctccgagatc aagagaaact ttttcgttac agtatctctc aatttggtgt tcaacaaaca
    10261 gaatcttatt ttgcagatct aaagcatatt ttgaatttat tagctgattt tccaacaatg
    10321 ggaacttctg cggaatatat tcgtggtggc ttgcgaatgc acacacatca atctcataca
    10381 atttattatc gaataaaagc agatcatata tttattgttc gcatcttaca taaccaaatg
    10441 aatcataaac gctatattta gaaaaatgaa agacttattt atcatagact cacattgtca
    10501 tctagattct ctagactacg aaactcgtca caaaaacgtg gacgaagtaa ttgaaaatgc
    10561 caaagcccga ggggtgcatc attttatctc ggtttgcact acagttgggc gttttgaagc
    10621 aatgaaaaac ttaaccgccc atcgtaatga cgtttcactt tcttgtggcg ttcacccgtt
    10681 gaatgtggaa gatgaacctt ttgattacga taaattattt cagttcgctc aagatccgaa
    10741 agtggttgcc attggggaaa ctggtttgga ttatcactac acaccggaaa ccaaagcgtt
    10801 gcaacaatcg cttttcgttc aacaaattga aattgcaaac aaactcaata agccactcat
    10861 tatccattct cgttcggcac gccaagatac gatggatatg ttggaacaaa ataatgccga
    10921 aaaatgcggt ggggtgttgc attgctttac cgaagattgg gcaatggcaa aacgggcttt
    10981 agacatcggc ttttatatct caatttcggg cattattact ttccgcaatg cagaagaact
    11041 ccgagaagtc gtgcgaaaag tgccgttaga tcgcttattg gttgaaacag attcccctta
    11101 tcttgccccg attccttatc gtggtaagcc gaaccagccg gcgtatgtgc gggaaacttg
    11161 cgaatatgtg gcgacattaa aaggcgtttc aactgaagaa ttagctcgca ttacaaccga
    11221 aaatgtgcaa cacttattca acattaaatt ataaggaact aatatgagag caatacttaa
    11281 gtattttctg attcttgtct cactatcatt ttttattgta ttaggcggtg cagttaatta
    11341 tgcaatgcca agttatgaag ataccgtagt aacaggtatg gaagtacgcc gaatggataa
    11401 agatggtatt atcagcaaag cgaatcctgc tgatggcgag gtgcgcgatg tttatttctt
    11461 attcacggaa gatcctgaaa ccaaaaaggt aatggtttat cgtaatgaag ataccggctg
    11521 ggggttgcct ccttatttca aattcggatc tgccgacatt caagccaaag ctcaagccta
    11581 cgctaacgaa aaacaacgtg tgcaaattaa atattacggc tggcgaatca attggctaaa
    11641 tgaatttaga aatattgttt caatcaagcc attagaagaa gcagaaacag tcagcaaacc
    11701 aattatgagc tatgtacttt atgccgtatt ggcgttcttg ttcttcctct cagtacaatt
    11761 tattcgtggc atttttaaag attaatgccg attaaccttt gacaaacggt tcgattttgt
    11821 aaaaaattga accgttttct tttttatcaa caatatcaaa tgacgtacta ttttattgcc
    11881 gatctccact taaatgaaaa tcagcctgaa attacccacc tctttttgca atttatgcaa
    11941 gaaaaagcac tacttgcaga agcggtttat atcttaggtg atctgtttga tttctggatt
    12001 ggcgatgatg agcagtctga actcatttca accgttaaac aggcaatcaa aaccctcact
    12061 acaagcggta caaaatgcta ttttatttgc ggaaatcgtg attttttaat tggcaaacga
    12121 ttcagcgaac aaacgggtat ggttattttg cctgattatc acgttataga tttattcggc
    12181 acatctacct tgctttgcca cggcgatacg ctttgtactg atgatgtgaa atatcaacaa
    12241 tttcgtaaaa aagtccacca aaaatggcga caagctatct ttttgatgtt tccgctttct
    12301 tggcgaattc gtattgcgga gaaaattcga tccaaaagca aacaagaaaa gcgtgataaa
    12361 tccgctgaaa ttatggacgt aaacgctgaa gttaccgctc aaattgtcgc aaaatacaat
    12421 acaactcaac ttatacacgg gcatacgcat cgacaagcaa tccatcagca taatggattt
    12481 acccgcattg tattaggcga ctggaaagaa aattacgcct ctattttaag cgtaaccgag
    12541 caaggagctg aatttatatg attaatgtga ttattccttg ctataacgcc gaaaacaccc
    12601 ttgttcgtgc agtgcaaagt gtattaaatc agtctggatt aaatctattg tggcttattg
    12661 atgatgcttc aacggataat acgcttgcct tagctaaaca tttacaagcc caagtgcctg
    12721 ataaaattag agtggaacaa atgcctcaaa atggcggtgt tgccaaagca cgcaactggg
    12781 gagcattaca aagtgaaaca gatttaattg cctttttaga tgctgatgat gcttatgaaa
    12841 acggggcatt gcaagttgct gaaaagattt ttgagtttaa accggaaacc ggcttggttc
    12901 ggttagcatt aaaaccggta acttagatca acgttacagc tctcacccta attttgagtt
    12961 agcttggcaa tatatgcaaa tgactggtgc aggcaacact gtatttcggc gtagtttctt
    13021 cctcgcttgt ggcggctttc cacaacatca gctcttccaa gaattaggtg gagaagatgg
    13081 tgctttaggc atagccacta cacaaattag ctctgtagct actgcattta atgatgtcgg
    13141 tgttttacat tactgccgag agggtatgca cgcagaaaga ttattaaatg cgattttatt
    13201 caacgaaaaa gatcccaatg ttactgaaga aaaagttaaa caagccaacc taattaccga
    13261 aaatattgtt aataatatta gaaatctaca agactgtctt aatagtaaag ggattggtat
    13321 taagccttat acgcttgaat ggagctaaaa aagcatttgc agattttccc taaaaaaa
//
LOCUS       DANLZQ010000081        12686 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.081, whole genome shotgun sequence.
ACCESSION   DANLZQ010000081 DANLZQ010000000
VERSION     DANLZQ010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 12686)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12686)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12686
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.081"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            80..1534
                     /locus_tag="PXE50_001904"
     CDS             80..1534
                     /locus_tag="PXE50_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HDL5622785.1"
                     /translation="MKKIVSTLLILTSNLAFAETTPAQLQEKMDNQRMQKNLHTLEKP
                     EPQAKPQAVNAQAHRQSISISSQQLLQQPELLNSAMLTALVTNHTENVQFLLPIYQQL
                     PASKQNSEVVQWAEAVNAKAKQNYSEAIKGYRQLLAKYPENQPIRMQLAVALFENREN
                     EAAEAQFYKLQADKLPQEIANAVNSYLEAIGKQDQWSFQGGLTYLNDPNINNAPNAGT
                     TYGNWTAPKKESAQGVGFHFEADKKWSWGNGFFHEFRLNGNGKYYWNNKKYNEYSLRE
                     SLGLGYQNAKQKITLLPFFEQMWYAGGSSQTESTKRYSNAGGVNARWQYWITPQWQSA
                     ISYEYAEQRYTRRQHLDGNYHFIAPSLYFYPNSRQYWFVGANFNRTSPRDLDDSFIRR
                     GVSIGWGQEWKNGLSTQLSASYARKQYRAPMPIFQITQRNSEYGVQASIWHRALHFKG
                     ITPRLTWQYNKVKSNHSFYSYDKNRVYIEFSHTF"
     gene            complement(1582..4179)
                     /gene="mutS"
                     /locus_tag="PXE50_001905"
     CDS             complement(1582..4179)
                     /gene="mutS"
                     /locus_tag="PXE50_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HDL5622786.1"
                     /translation="MTQDFSTHTPMMQQYLQLKAQNPDILLFYRMGDFYELFYDDAKR
                     AAALLDISLTKRGQSAGEPIPMAGVPYHAVEGYLAKLVALGESVAICEQIGDPATSKG
                     PVERKVVRIVTPGTVSDEALLPERQDNLVAAVYEEKGTFAIATLDMTSGRFLISELAS
                     KEALSAELQRVQPAEILYAEDFSAASILTNYKGLRRRPVWEFELVTAIQLLNRQFGTQ
                     TLAGFGVEKAVVALCAAGCVLHYAQETQRTALPHINAIHLAQHSDTILLDAATRRNLE
                     LTQNLAGGTENTLAAVLDKCVTPMGSRLLKRWIHQPIRDCGKLQARQKAITALIQYER
                     MSDLQPLLQQVGDMERILARVALRTARPRDLTRLRTALAQLPEIAKNSQNLTASIDQL
                     LAQLADFSPLHDLLERAIIENPPQLIRDGGVIAEGYNAELDEWRQLSDGATQYLENLE
                     IRERESTGIDSLKIGFNAVHGYYIQISQGQAHKAPIHYVRRQTLKNAERYIIPELKTY
                     EDKVLKAKGASLALEKQLYDELFDVLMPRLGELQLAAMMLSELDVLTNLAERADSLGY
                     VCPSFSPMRMVNIKGGRHPVVEQVLTEPFIANPVFLNSQRHLLIVTGPNMGGKSTYMR
                     QIALITLMAYIGSFVPAESAEIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQ
                     ATENSLVLIDEIGRGTSTYDGLSLAWACAEWLAKKTQSLTLFATHYFELTGLPNQLKG
                     VANVHLDAREHQDSIVFMHSVQEGAASKSYGLAVAALAGVPKQVIQLAKQRLAHLEEI
                     SHQTKQANEHPQADLLFSDGFDLQKNEAIQPLVVENEVEKALKALQPDELTPRQALDE
                     LYRLKKLLG"
     gene            4329..4892
                     /locus_tag="PXE50_001906"
     CDS             4329..4892
                     /locus_tag="PXE50_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5358 domain-containing protein"
                     /protein_id="HDL5622787.1"
                     /translation="MLRKIVLLSTGLLLAACSSNEPQQPEAFPGEFANADYVLSEENA
                     QKWVIASEQAKQCIYPNLTRIQQEHFSKEDSYIFSQYVFFYPLEEIIGEQYVKIIQND
                     EKSMGYAQYLFKKLKNNEAVEALPKKQCATLRTNAKNDLAVVKGQYQSGMIEETNSQE
                     GKSGDKVATNDNKFFFDIIKWGSMLLL"
     gene            5066..5695
                     /locus_tag="PXE50_001907"
     CDS             5066..5695
                     /locus_tag="PXE50_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HDL5622788.1"
                     /translation="MAVSATSFAQTTQPTAAEQMNAVKASVAEKATVAKEATKEKAAE
                     LKAGSAEKMAIAKAKTESFKDSAKNKMDAVKATTAEKTDVIKAKAASASDTMKVKAQE
                     AKAATAEKAATAHETLNSAKTATAEKAASMKAAATEKMSAVKKSQKVNINTANEEQLQ
                     SLTGIGEAKAKAIVEYRKKHGKIKNAAELANIPGIGDATIEKVAPYLTF"
     gene            5843..6472
                     /locus_tag="PXE50_001908"
     CDS             5843..6472
                     /locus_tag="PXE50_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007526112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HDL5622789.1"
                     /translation="MALDFNSVGLDSVEAKGGYGIGLQIGQQLLGSGMDVNAETVARG
                     IYDVLNNNEPAIDINEVTAALQELGQRAEAAQAEAFKAIDAENKAFLEENKKANGVIV
                     TDSGLQYEILTEGTGEKPTATSTVRVHYTGSLIDGTVFDSSVKRGQPAEFPVNGVIRG
                     WTEALQLMPVGSKWRLTIPQELAYGERGAEASIPPFATLVFEVELLDIL"
     gene            6538..7053
                     /locus_tag="PXE50_001909"
     CDS             6538..7053
                     /locus_tag="PXE50_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein disulfide oxidoreductase"
                     /protein_id="HDL5622790.1"
                     /translation="MQKKSLISRLLKNIFLYGSLFIIISLVVDWYRSPSAPAQFEQTV
                     HYDIQHQPKVIAQLSHEKPMLLYFWGSWCHYCQVVSPNIQQLANDGTEVLGVALKSGD
                     ENDVQAYLNENGYTFATLNDPSGDFSRGWNIQATPTILIIKDGKIAHHTTGYTSYLSL
                     KFRLWLADVLY"
     gene            complement(7101..8031)
                     /locus_tag="PXE50_001910"
                     /pseudo
     CDS             complement(7101..8031)
                     /locus_tag="PXE50_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015433453.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            complement(8090..8740)
                     /locus_tag="PXE50_001911"
     CDS             complement(8090..8740)
                     /locus_tag="PXE50_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595-like element ISMha4 family transposase"
                     /protein_id="HDL5622791.1"
                     /translation="MRKSRLSQYKQNKLIEQFVAGVTARTASELVNVNKNTAAYYFHR
                     LRLLIYQHSPHLEMFEGEIEVDESYFGGHRKGKRGRGAAGKTAVFGLLKRDGKVYTVV
                     VPNTQFATLLPIIREKVKPDSIVYTDFYRSYDVLDVSEFNHFRINHSTHFAENQNHIN
                     GIENFGSQAKRHLRKFNGIPKVHFELYLKECEWRFNHSDLKSQISFLKQLVKGSLG"
     gene            9069..10427
                     /gene="mnmE"
                     /locus_tag="PXE50_001912"
     CDS             9069..10427
                     /gene="mnmE"
                     /locus_tag="PXE50_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HDL5622792.1"
                     /translation="MKDTIVAQATPIGRGGVGILRVSGPLAETVAQAVLGKTLPPRIA
                     NYLPFKDEDGTVLDQGIALFFKAPNSFTGEDVLELQGHGGQVILDLLLKRILQVKGLR
                     IARAGEFSEQAFLNDKLDLAQAEAIADLIDATSEQAARSALKSLQGEFSNKINALVDS
                     VIYLRTYVEAAIDFPDEEIDFLADGKIEAKLNEIIAQLDGVRREAKQGSILREGMKVV
                     IAGRPNAGKSSLLNALAGREAAIVTNIAGTTRDVLREHIHIDGMPLHIIDTAGLRDAS
                     DEVERIGIQRAWEEIAQADHVLLMIDSTEQQADQFRQEWAEFLAKLPANMPVTVIRNK
                     VDLSGEQEGLIQVDDFTMIRLSAQTKVGVDLLREHLKKSMGYQSSTEGGFLARRRHLQ
                     ALETAAEHLERGHIQLTQFLAGELLAEELRMVQNALSEITGQFTSDDLLGNIFSSFCI
                     GK"
     gene            10428..11693
                     /gene="tilS"
                     /locus_tag="PXE50_001913"
     CDS             10428..11693
                     /gene="tilS"
                     /locus_tag="PXE50_001913"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HDL5622793.1"
                     /translation="MALFNRFQTQCATHLPNQTAFLIGLSGGVDSVVLLHLFARTSFH
                     VRAIYVHHGLSPNADDWAAFCEQYCKRLNIPFILQKVRVDSSNGVENGAREARYQAIQ
                     QQLKPNEVFATAHHLDDQAETFLLALKRGSGVKGLSAMQAVTFLQNFTVFRPLLTFTK
                     SDLMGYAVQHQLGWIEDESNADNRYDRNFLRNSILPLLNQRWQHFSQMVARSAQHCAE
                     QQALIEELLSNELKSRTGEKQQLNINGFGQFSLAKQQQLSRLWLEQNGVRMPSQAQLQ
                     AVISELIFAKADKNPQVKVGENIIRRYQQAIYVTEEIADIPPFEVVLPTETKVELPYQ
                     LGTIIRQQQEIICKKNGKNHRLQLPQELAQSTISIKIGQLGKVKCYGKAQREEMKKIW
                     QNHGIPVWERNRTPLIFWQDELVGLLPIL"
     gene            complement(11683..12576)
                     /gene="xerD"
                     /locus_tag="PXE50_001914"
     CDS             complement(11683..12576)
                     /gene="xerD"
                     /locus_tag="PXE50_001914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HDL5622794.1"
                     /translation="MAELDPIIEQFLDTLWQEHGLSENTVASYRSDLERFSDYFSEPK
                     AFLSLDHIDLQGFLGERLEQGYKATSSARMLSCLRKFFRFLCLEHYRQDDPTLTLSSP
                     KRGASLPKSLSEDQVMDLLDAPNTLDPIELRDKAMLELLYATGLRVTELVSLSMDNIS
                     LKQGVVRIIGKGDKERLVPLGEEANYWIQEFFQYGRPILLNNQQSDVVFPSRRGQQMT
                     RQTFWHRIKHYAVLAGIDADKLSPHVLRHAFATHLVNHGADLRVVQMLLGHSDLSTTQ
                     IYTQVAKARLKSLHQQFHPRG"
BASE COUNT         3810 a         2948 c         2693 g         3235 t
ORIGIN      
        1 atatagcaaa acaacctcaa aactcttcac taaaggctat tgaaaaatag ccttttctat
       61 tcaaataaaa gatagcttta tgaaaaaaat agtctcaacg cttttaatcc ttacctcaaa
      121 cctggcattt gcggaaacca caccggctca acttcaagaa aaaatggata accagcgaat
      181 gcagaaaaac ctacatacat tagaaaagcc tgaacctcaa gccaaaccac aagcggttaa
      241 tgcacaggct caccggcaat cgatctctat ttcaagccaa cagctgcttc aacagcctga
      301 gttgctcaac tcggcaatgc taactgcgtt ggtcactaac cacactgaga atgttcaatt
      361 cttactgcct atttatcaac aattacccgc cagtaaacaa aacagcgaag ttgtacaatg
      421 ggcggaggca gttaatgcca aagcaaaaca aaattattca gaggcaataa aaggctaccg
      481 tcagctactg gcaaaatacc ctgaaaatca gccaatccgt atgcaattag cggttgcatt
      541 gtttgaaaat cgggaaaatg aagccgcaga ggctcaattt tataagttac aagcggacaa
      601 attaccgcaa gaaattgcaa atgcggtcaa tagctatttg gaggcgattg gcaagcaaga
      661 tcaatggagt tttcaaggcg gcttaaccta tttgaatgac ccgaatatca acaatgctcc
      721 aaatgcaggc acgacctatg gcaactggac tgcaccgaaa aaagaatccg cccaaggggt
      781 cggctttcac tttgaggcgg ataaaaagtg gtcttggggc aatggtttct tccacgagtt
      841 tcgtttaaac ggaaacggca aatattactg gaataacaaa aaatataacg aatattcgct
      901 cagagaaagc ctcggcttgg gttatcaaaa tgcaaaacaa aaaatcacct tgttgccgtt
      961 ttttgagcag atgtggtatg ccggtggctc aagccaaacc gaaagcacca aacgctactc
     1021 caacgcaggc ggtgtgaatg cccgctggca atattggatt actccacagt ggcaatctgc
     1081 aatcagctac gaatatgcgg aacagcgtta cactcgccgc caacatttag acggcaatta
     1141 tcattttatt gccccgagcc tctattttta ccctaacagc cggcaatatt ggtttgtggg
     1201 ggcgaatttt aaccgcacca gcccccgtga tttagatgat agctttattc gccgaggtgt
     1261 ttctattggt tggggacaag agtggaaaaa cgggctttca acccaattaa gtgccagcta
     1321 cgcccgcaaa caataccgag ccccaatgcc gattttccaa attacacaac gtaacagtga
     1381 atatggtgtg caagccagca tctggcacag agccttgcat tttaagggta ttacccctcg
     1441 cttaacgtgg caatataaca aggtaaaaag caatcatagc ttctatagtt atgacaaaaa
     1501 ccgtgtctat attgagtttt cacatacgtt ctaaacaaaa acgcccctta aacggggcga
     1561 tttcttagtt attttttcaa tttaccccaa caattttttc aagcgataca actcgtccaa
     1621 agcctgtctt ggggtaagtt catcaggctg aagggctttc agggcttttt caacttcatt
     1681 ttctactaca agcggttgaa ttgcttcatt tttttgcaaa tcaaaaccat cggaaaacaa
     1741 caaatccgcc tgtggatgtt cgtttgcttg tttggtttgg tgggaaattt cctccaaatg
     1801 tgccaaacgc tgctttgcca gttgaatcac ttgctttggc acacccgcca aggctgccac
     1861 cgccaagccg taacttttgc tggcggcccc ctcttgcacc gagtgcataa acacaatact
     1921 gtcttgatgt tcacgcgcgt ctaaatgcac atttgccacc cctttgagct gattcggcaa
     1981 gccggtaagt tcaaaatagt gggttgcaaa caaagtgagt gactgggttt tcttcgccag
     2041 ccattcggca cacgcccacg ccagtgataa gccgtcatag gtagaagtgc ctcgcccgat
     2101 ttcatcaatc agcacaaggc tgttttcggt ggcttgatgc agaatattcg ccatttcggt
     2161 catttccacc ataaaggttg aacgccctga agctaaatca tcgcttgccc caattcgggt
     2221 gaaaatacgg tcaatcgggc cgatttccgc actttctgcc ggcacaaaac tgccgatata
     2281 cgccatcaat gtaatgaggg caatttgccg catataggtg cttttaccgc ccatattcgg
     2341 gccggtcaca atcaataaat gccgttggga atttaaaaac accggattgg caataaacgg
     2401 ctcggttaaa acctgctcca ccaccgggtg tctgccgcct ttaatattca ccattcgcat
     2461 cgggctaaag ctcgggcaaa catagcctaa actatcagct cgctcggcaa ggttggttaa
     2521 gacatcaagt tcagacagca tcatcgccgc taattgcaat tcgcctaagc gaggcattaa
     2581 cacatcaaac agttcatcat aaagctgttt ttcaagggca agcgatgccc cttttgcttt
     2641 cagcactttg tcttcgtaag ttttcagctc agggataata taccgctccg catttttgag
     2701 cgtttggcgg cgaacatagt gaatcggggc tttgtgtgct tgcccttggc tgatctgaat
     2761 gtaatagccg tgaaccgcat taaagccgat tttcagcgaa tcaatgccgg tgctttcacg
     2821 ttctctgatc tccaaatttt ccagatattg cgttgccccg tccgaaagtt gccgccattc
     2881 gtcaagctcg gcattataac cttctgcaat caccccacca tcacgaatga gttgtggtgg
     2941 gttttcgata atcgcccgct ccagcaaatc gtgtaacggg ctgaaatccg ccagttgagc
     3001 caaaagctga tcgatactag cggtcagatt ttgtgaattt tttgcaattt ccggtaactg
     3061 agccaatgca gtgcgtagtc gggtgaggtc acgagggcga gccgtacgca acgccactcg
     3121 ggcgagaatc cgctccatat cgccgacttg ttgtaataac ggctgtaaat ccgacattcg
     3181 ctcatattgt atcaatgctg ttatcgcctt ttgtcgggct tgtaatttac cacaatctcg
     3241 aatcggctga tgaatccaac gcttgagcag acggctcccc attggggtca cacatttatc
     3301 taacaccgcc gccagcgtgt tttccgtgcc acccgctaag ttttgggtca gctctaaatt
     3361 gcgacgagta gctgcatcga gcaaaatagt atcgctatgt tgtgccaaat gaattgcgtt
     3421 aatgtgcggt aaagcggtgc gttgcgtttc ttgggcataa tgcaagacac agccggcagc
     3481 acaaagtgcc accaccgctt tttccacccc aaatccggca agtgtttgcg tgccgaattg
     3541 gcgatttagc agctgaatcg ccgttaccag ctcaaattcc cacaccggac ggcggcgtaa
     3601 ccctttgtaa ttcgttaaaa ttgaggcagc ggaaaaatct tccgcataca gaatttctgc
     3661 cggttgtaca cgttgtaact cggcggatag agcctctttg ctagcaagtt cactgattaa
     3721 aaaccgcccg gaggtcatat ctagcgtagc aatcgcaaat gtgccttttt cttcgtaaac
     3781 tgccgccacc aagttatctt ggcgttcggg taacaatgcc tcatcgctaa ctgttcccgg
     3841 cgtaacaatc cgtaccactt tgcgttctac cggccctttt gaggttgctg ggtcgccaat
     3901 ctgttcacaa attgctaccg attcccccaa cgccaccaat ttcgccaaat acccctccac
     3961 tgcgtgataa ggcacacccg ccatcggaat cggctcaccg gcagattgcc ctcgcttggt
     4021 gagcgaaata tccaacaatg ctgccgctcg tttcgcatca tcataaaaca gctcataaaa
     4081 atcccccatt cggtaaaaca atagtatgtc cggattttga gctttgagtt gcaaatattg
     4141 ttgcatcatt ggcgtatggg tggagaaatc ttgtgtcatc agtctattta ttgtgagaaa
     4201 tcattgctga tagtttaaca gattcagcca agggataaaa acaagcggtc atttttcgct
     4261 gaaaatttgc aatggtcagc cgctgttttt ttgttacaat gcaccaaatt tttaaaacag
     4321 aggtcagaat gttaagaaaa atagtgctac tttctacagg cttattattg gcggcttgta
     4381 gcagcaatga accgcaacaa ccggaagcat tcccgggcga atttgccaat gccgattatg
     4441 tgctttcgga agaaaatgct caaaaatggg taattgccag cgaacaggca aaacagtgta
     4501 tctaccccaa tttaacccgt attcagcaag agcatttttc caaagaagat tcttatattt
     4561 tctcacaata tgtatttttc tatccgcttg aagagattat cggggagcag tatgtaaaaa
     4621 tcattcaaaa tgatgaaaaa tcaatgggtt acgctcaata tttattcaaa aaactgaaaa
     4681 ataacgaagc ggttgaagcg ttaccgaaaa aacaatgtgc gaccttacgc accaatgcaa
     4741 aaaatgattt ggcagtggta aaagggcagt atcaaagcgg tatgatcgaa gaaaccaata
     4801 gccaagaagg gaaatcaggc gataaagttg ccaccaatga taataaattc ttcttcgata
     4861 ttatcaaatg gggcagtatg ttacttctct agtgagcctc aatactcggt tgttttaacc
     4921 acaaccgagc catttatacc taccgattga acttttatct aaagcctcag tcttaaaata
     4981 cagttttttt caattatttt ccctctttta tatttaagga ttttcaataa aagcattaaa
     5041 aacattatta gcattgggcg tggcaatggc tgtttcagct acttcatttg cacaaaccac
     5101 tcaacctact gcggctgaac aaatgaacgc agttaaagcc tctgttgccg aaaaagcaac
     5161 tgtggctaaa gaagcaacaa aagagaaagc agcggagtta aaagccggtt ctgcggaaaa
     5221 aatggcgata gcaaaagcca aaaccgaatc atttaaagat tccgctaaaa acaaaatgga
     5281 cgcagtaaaa gccaccacag cagaaaaaac ggacgtgatt aaagcgaaag ccgcatctgc
     5341 aagcgacaca atgaaagtga aagctcagga agcaaaagcc gccaccgcag agaaagctgc
     5401 aactgctcat gaaaccttaa attcagccaa aaccgcaacc gctgaaaaag cggcctcaat
     5461 gaaagcagct gcaacagaaa aaatgtcagc agtgaaaaaa tcacaaaaag tgaatatcaa
     5521 cactgccaac gaagagcaat tacaatcgct taccggcatt ggtgaagcaa aagccaaagc
     5581 gattgtagaa taccgcaaaa aacacggtaa aatcaaaaat gcagcagaac tggcgaacat
     5641 tcccggcatt ggcgatgcaa ccattgagaa agttgctcca tatttaactt tctaatgttc
     5701 tgcaagcggt tattttgttg caaaattttg cagaaaaata accgcttgtt catttcacac
     5761 cttgtattct taaatttcac ccccattaag tgaatcgtat ttctttcaat acagtattca
     5821 ataaactcaa aaggaacaga aaatggcatt agatttcaat tcagttggat tagattcagt
     5881 agaagcaaaa ggcggttacg gcatcggttt acaaattggt cagcaacttt taggcagcgg
     5941 aatggacgta aacgcagaaa ccgttgcccg tggtatttat gatgtgttaa acaacaatga
     6001 gccggcaatc gacatcaatg aagtgaccgc tgcattacaa gaattaggtc agcgtgcgga
     6061 agcggctcaa gcagaagcat tcaaagcgat tgatgccgaa aacaaagcgt tcttggaaga
     6121 gaataaaaaa gcaaacggtg taatcgttac cgacagcggt ttacaatatg aaattttaac
     6181 cgaaggcaca ggcgaaaaac cgactgcgac ttcaaccgtg cgtgttcact acaccggttc
     6241 attaattgac ggcaccgtgt ttgacagctc ggtaaaacgc ggtcagccgg cagaattccc
     6301 ggtaaacgga gtaattcgtg gttggacaga agcattgcaa ttaatgccgg ttggctcaaa
     6361 atggcgttta accattccac aagaattagc ctacggcgaa cgtggtgcag aagcatcaat
     6421 tccaccattt gcgaccttag tgtttgaagt ggaattgctt gatattctct aatcaaactc
     6481 aaataaaaaa cctgtggagg catttcacag gtttttgcta tttaagataa ctatattatg
     6541 cagaaaaaat cactcatatc tcgcttactt aaaaatattt tcctctacgg cagcctgttt
     6601 atcattatta gcctggtggt tgattggtat cgctcgccct ccgctccggc acaatttgag
     6661 caaaccgtgc attatgatat tcaacaccag ccgaaagtaa tcgcccaatt aagccacgag
     6721 aagccgatgc tactctattt ttggggaagt tggtgccact attgccaagt ggtttcgcca
     6781 aatatccaac aattagcgaa tgacggcacg gaagttttag gtgttgccct gaaatccggc
     6841 gatgaaaatg acgtacaagc ctatctcaat gaaaatggct acactttcgc tactttgaat
     6901 gacccaagcg gtgatttctc tcgaggttgg aacattcaag ccaccccaac catcttgatt
     6961 atcaaagacg gtaaaatcgc ccaccacacc accggctaca ctagctattt gagcttaaaa
     7021 ttcagactat ggctggcaga cgtgttgtat taaacgattc ctttcatttg caaaaaaatc
     7081 cactaaatcc gaccgcttgt ttacaccaaa aagacaagcg gtactaaatt cattgtcatc
     7141 attgtggtga tcgataaaat cagcctcgat gagccaaaaa taaagcctcg gtttttgccg
     7201 ttgtcgaatt tcaccagtaa atttgccatt gctgtgaggg cgtacacttc caccaccgta
     7261 aaaatcacgg tgtaaatata ggcagcggtc agagttgcga cttttaccgc aataaaccaa
     7321 ggggcaataa tcgccaccgc taataacggc gaaatccaaa ttaattgctg tttggtgagg
     7381 ttgattttac gagaaaaagt cgattgcaaa ctgacggtta aaacaccgtt gatgaataac
     7441 gcaatcggcg aatgctccgg tgcgtgcagg acattgtcga ataaatacgg aaaaatcact
     7501 cagcggcaca aatagcatta agtgagcgaa caaaaactct ttgttgatga tttccttaat
     7561 ttgtgcgaaa cgaaatttca cgccgccatt cacgccttcc accgaataaa acggcttgac
     7621 cataaacgca aacaagccgg cttccaaaat aaagcagatc caaatcagcg tttcaatcat
     7681 ctcaaaccta ataaacggaa taataatcag cggggcgagc attgaagaca tactggtgac
     7741 ttttagatat ttgccttgta aacgggtttt agcagcatat tcatcgccgg caatcgccag
     7801 taaacaggct ctggcattag tgccgaataa gcaactcccc aacccaaagc aagtggttgc
     7861 caacaataaa atgaggtaat tatccgctgc taaaaacagc atataggcaa ccacatctaa
     7921 taaacagccc aataacatca tttttgccaa gccgtagcga tccccccaaa tgccggctaa
     7981 aattgccaat gcctgattac aaaacaacag caatgaaagg aaaaaagcga tttgggcgtt
     8041 atctagccct ttctctttta aataaaagaa aaggggctgt cctagataac taacctaaac
     8101 tacccttaac caattgtttt aaaaaggata tttgagattt taagtcactg tgattaaaac
     8161 gccattcgca ttctttcaaa tacagctcaa aatgcacttt gggaatgccg ttaaacttac
     8221 gcaaatggcg ttttgcttgg ctcccaaaat tctcaattcc attaatgtga ttttgatttt
     8281 cagcgaagtg tgtgctgtga ttaatgcgaa aatggttaaa ttcactcaca tcaagcacat
     8341 cataacttcg atagaaatcg gtgtaaacaa tactatcggg tttcaccttt tcccgaataa
     8401 tcggcaaaag tgtggcaaat tgcgtgtttg gtactaccac ggtataaacc tttccgtccc
     8461 gctttaaaag cccgaacacg gcggttttgc ctgctgcacc acgtccacgt ttacctttac
     8521 gatgaccgcc gaaataactc tcatcaacct caatttctcc ctcaaacatt tccaaatgag
     8581 ggctatgttg atagataagc aaccgcaagc gatggaagta atacgccgcc gtgtttttgt
     8641 ttacattgac caactcagat gctgttcggg ctgttacccc tgcaacaaac tgctcaatga
     8701 gtttgttttg tttgtactga cttagacgac tttttctcat ttgggtatct taacctaaat
     8761 ggagttttta gtcgttatct aggacagccc caaagaaaaa cacgctttgc attgaaaaaa
     8821 aggcggtggt ggaaataaaa cggcgtagga gtaatagttt ttctaaagac attcagaatg
     8881 gttgaattgg ttaaataaag agcggttatt ctacctttta agtcaacccc aatcaatcgg
     8941 cttttgtttt acctttggcg tgggtttcgg tatgataagc gatatgtagt ggcgggtcct
     9001 gtgcccgcct aaataccaat gataacttgc gggcgagcac aggactcgcc cctacgataa
     9061 acaagaaaat gaaagacacc attgttgctc aagcaacacc gattggcaga ggcggtgtgg
     9121 ggattctgcg agtttccggt ccgcttgccg aaaccgttgc tcaagccgta ttaggcaaaa
     9181 cattgccacc ccgtatcgca aattatttgc cgtttaaaga cgaagatggc actgtgttgg
     9241 atcaaggcat cgccttattt tttaaagctc ccaactcctt taccggcgaa gatgtgcttg
     9301 aacttcaagg acacggtggg caggttattt tagatttact gctcaaacgc attttacaag
     9361 ttaaggggct acgcattgcc cgagcaggtg aattttccga acaggcattt ttaaacgata
     9421 agctcgacct tgcccaagct gaagcgattg cggatttaat cgacgccacc agcgagcaag
     9481 ccgctcgttc agccctgaaa tcactacagg gtgaattttc taataaaatc aatgcgttag
     9541 ttgattcagt aatttattta cgcacttatg tggaagcggc gattgacttc cccgatgagg
     9601 aaattgactt tctggcagac ggtaaaatcg aggcaaaatt aaatgagatt atcgctcaat
     9661 tagacggtgt tcgccgtgaa gcgaaacaag gctcgattct gcgtgaagga atgaaagtag
     9721 tgatcgccgg tcgcccgaat gcagggaaat caagcttgct taacgcctta gccggacgag
     9781 aggcggcgat tgtaaccaat attgctggca caacccgtga tgtgttgcgt gaacatattc
     9841 acattgacgg aatgccgttg catattatcg acaccgccgg tctccgtgat gccagtgatg
     9901 aggtggaacg tatcggcatt cagcgtgctt gggaagaaat cgcccaagcc gaccacgttt
     9961 tattaatgat tgacagcacc gagcaacaag ccgatcagtt ccgacaagag tgggcggaat
    10021 ttctagccaa actgccggca aatatgcctg tgaccgtaat tcgcaacaaa gtcgatttat
    10081 ccggcgagca ggaaggctta attcaggtgg acgatttcac gatgattcgc ctctctgccc
    10141 aaaccaaagt cggcgttgat ttattgcgtg aacacttgaa gaaatcaatg ggctaccaaa
    10201 gttctacgga aggcggattc ttggctcgcc gccgtcatct gcaagcattg gaaaccgctg
    10261 ccgagcattt agagcgaggg catatccagc ttactcaatt cttagccggc gaattgttag
    10321 cggaagagtt gcgtatggtg caaaatgcct taagtgaaat taccggccag ttcacctctg
    10381 atgacttatt aggcaacatt ttcagctcat tttgcatcgg taaataaatg gcacttttta
    10441 accgctttca aacccagtgt gcaacgcatt tgccgaacca aaccgccttt ttaatcggct
    10501 taagcggtgg ggtggattcg gtggtactac tccacctttt tgcccgcacc tcatttcacg
    10561 ttagggcaat ttatgtccac cacgggctaa gcccaaatgc ggacgactgg gcagcctttt
    10621 gcgaacaata ttgcaagcgg ttaaatattc cctttatttt acaaaaggtc agagtggata
    10681 gctcaaacgg cgttgaaaac ggggcgagag aagctcgtta ccaagccatt caacaacagc
    10741 ttaagcccaa tgaagtgttc gccaccgccc accatttaga tgaccaagcc gaaacttttt
    10801 tgctcgccct caagcgaggc agtggagtca aaggattatc ggcgatgcaa gcggtcactt
    10861 ttttgcaaaa ttttaccgtt tttcgaccgc tactcacttt tactaagtca gatttgatgg
    10921 gttatgccgt tcaacatcag ctaggttgga ttgaggacga aagcaatgcc gataaccgtt
    10981 acgaccgtaa tttccttcgc aatagcatct tgccactact caatcaacgt tggcagcact
    11041 tcagccaaat ggttgcccgt tccgctcagc attgtgcaga acagcaagcc ttgatagaag
    11101 agctattaag caatgaactc aagtcaagaa caggggaaaa acaacaactc aacattaacg
    11161 gctttgggca attttcactt gccaagcaac agcaacttag ccgcctttgg ctggaacaaa
    11221 acggagtgag aatgccaagc caagcccagc tacaagcggt catttctgaa ctgatttttg
    11281 caaaagccga taaaaaccca caggttaaag tcggcgaaaa tattatcaga cgctatcaac
    11341 aagctattta cgttaccgaa gagatcgccg acattccgcc gtttgaggta gtacttccca
    11401 cagaaaccaa agtggaatta ccctatcagc tcggtactat tattcgccaa caacaagaga
    11461 tcatttgcaa aaaaaacggg aaaaatcacc gcttgcaact gccccaagag ctggctcaat
    11521 caactatttc tattaaaatc gggcaactag gcaaagtaaa atgctacggc aaggctcaac
    11581 gggaagaaat gaaaaagatt tggcaaaatc acggcatacc tgtttgggaa cgcaaccgta
    11641 caccgctgat tttttggcaa gacgaattag ttggcctatt acctatcctc tagggtgaaa
    11701 ttgctgatga agcgatttca aacgggcttt tgccacttga gtgtaaatct gggtggtcga
    11761 taaatcacta tgccccagca acatctgtac cactcgcaaa tcagccccat gattgaccaa
    11821 atgggtcgca aaggcgtggc gaagcacgtg aggcgagagt ttatctgcat caatacctgc
    11881 aagcacggca tagtgcttaa tccgatgcca aaacgtctgc cttgtcatct gctgacctcg
    11941 ccggctcgga aatacaacat cagactgctg attattcagc aaaatagggc gaccgtactg
    12001 gaaaaactcc tgtatccaat aattcgcctc ctcgcccaat ggcactaacc gctctttatc
    12061 ccctttaccg ataattctca ccaccccttg tttgaggctg atattatcca tcgaaagcga
    12121 caccagctcc gttacccgca gaccggtggc atacagcagc tccagcattg ctttatcccg
    12181 taactctatc ggatctaacg tattcggggc atctagcaaa tccattacct gatcttcact
    12241 taaggatttg ggtaaagaag caccccgttt aggggaagaa agggttaaag tcgggtcatc
    12301 ttggcgataa tgctcaaggc ataaaaaacg gaaaaatttc cttaaacaac tcaacattct
    12361 ggcagagctt gtcgccttat agccttgctc caaacgctcg ccgagaaaac cttgtaagtc
    12421 gatatgatcg agagacagaa atgctttagg ttcagaaaaa taatcggaaa aacgctctaa
    12481 gtcagaacga taagaggcaa cggtattttc agacaaaccg tgttcttgcc atagtgtatc
    12541 gagaaattgt tcaataatag ggtcaagctc agccatacaa gcgggtatat tttcaggaaa
    12601 ttttgcaaat tttaacagaa ttaaatctat aaaaatacaa aagcgataga aacgaaaaaa
    12661 ccgattagct tatgctaatc ggttta
//
LOCUS       DANLZQ010000082        12516 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.082, whole genome shotgun sequence.
ACCESSION   DANLZQ010000082 DANLZQ010000000
VERSION     DANLZQ010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 12516)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12516)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12516
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.082"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(313..495)
                     /locus_tag="PXE50_001915"
     CDS             complement(313..495)
                     /locus_tag="PXE50_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622795.1"
                     /translation="MYQFGYLRTKIGTDTQRAMLWNCPTYVLIIPFLLNTSVKKQYHA
                     FWQKYHQHNNDVSFPY"
     gene            645..1685
                     /gene="selD"
                     /locus_tag="PXE50_001916"
     CDS             645..1685
                     /gene="selD"
                     /locus_tag="PXE50_001916"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020909986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:690..692,aa:Sec)
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HDL5622796.1"
                     /translation="MSEPIKLTQFSHGAGUGCKISPKVLGTILQTQLEQFVDPNLLVG
                     NETADDAAVYDLGNGQAIISTTDFFMPIVDAPFDFGRIAAANAISDIYAMGGKPIMAI
                     AILGFPVNKLPAEVAQQIVEGGRFACQQAGIALAGGHSIDSPDPIFGLAVTGIVPTER
                     VKRNASAVAGCELFLTKPLGIGILTTAEKKGLLKPEHQHLASEVMCQINLIGSAFSEL
                     PEVTAMTDVTGFGLLGHLSEVCQGSGLRAEVDFEDIQVLDGTKEYIALGAVPGGTNRN
                     FDSYGHLISAMTDEQKAILCDPQTSGGLLVAVLPQAVEKVQQIANRANVPLFHVGRLL
                     EMEQGKPRIEVI"
     gene            1685..2158
                     /locus_tag="PXE50_001917"
     CDS             1685..2158
                     /locus_tag="PXE50_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HDL5622797.1"
                     /translation="MFKPNVTMACVVHCKGKFLFVEEIEYGKRTLNQPAGHLEKDETL
                     LEGASRELFEETGIRAEMANWVKIYQWQAPRSQTDFLRFLFSVELEEWLEPNPQDADI
                     TQALWLTLAEFEDYIQQQGQCARSPLVVQSVKDYLSGERYPLSLLNAFEWARNGK"
     gene            2148..3356
                     /gene="ubiH"
                     /locus_tag="PXE50_001918"
                     /gene_synonym="visB"
     CDS             2148..3356
                     /gene="ubiH"
                     /locus_tag="PXE50_001918"
                     /gene_synonym="visB"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-octaprenyl-6-methoxyphenyl hydroxylase"
                     /protein_id="HDL5622798.1"
                     /translation="MENKTTTQFDVVIVGGAVTGSVLALALSSFTHHKISIAIVEKSL
                     PDYEQQGGFDARSIALAEGSLQKMGQIRPLAGSSLGEMISEIGTPIQQIQVADKGHFG
                     KTTLKASEQNVAQLGMVVELAKFGRKLTACLAQQANITLFCPNQVVGIERSQQHCGLS
                     LKNGEKLSCSLLVAADGIQSQIAKQCGVETVKVRDYAQSAIIANVELSESHQNQAFEY
                     FTPQGPFALLPLSGNMMSLVWCVKEPNELIQLSDSEFLARLQQQFGWKLGQFVRVSKR
                     FVYPLILQKAQSHIHHRLAVVGNAAQMLHPVAGQGFNLGLRDLTTLAELVALAFNQGK
                     DIGEFSLLSTFENERTQDQARMINATSGLISLFCCEMLPVQVVRNLGLLTVSHSKIAR
                     DFVANQALGW"
     gene            3619..4851
                     /locus_tag="PXE50_001919"
     CDS             3619..4851
                     /locus_tag="PXE50_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-xanthine permease"
                     /protein_id="HDL5622799.1"
                     /translation="MTTENMSTPKQAFIGLQMLFVAFGALVLVPLITGLDPNVALLTA
                     GVGTLIFQICTKRQVPVFLASSFAFIAPIQFGVQQWGIPVTMGALLCSGFIYMALSAL
                     VKAKGVNILHKYFPPIVIGPVIMVIGLGLAPVAVDMATGKSANIAYNTAIIVSMITLV
                     TTLIVAVFAKGLLKLVPILAGLTVGYILSVFMGLVDFTKVVEAPWFSLPKVSAPEFKL
                     DAILYLLPIALAPAVEHLGDVMAISQVAGKDFMKKPGLHRTLLGDGLATSAAAALGGP
                     PNTTYSEVTGAVMLTKNFNPKIMTWAACWAIAFSFCGKIGAFLATIPTFVMGGIMMLL
                     FGAVAVVGINTLIKAKVDLSIPRNLCIASVVMTFGIGGMLINIGEFSLKGISLCALVA
                     IVLNIVLPKEKVEDSAAH"
     gene            4918..5904
                     /locus_tag="PXE50_001920"
     CDS             4918..5904
                     /locus_tag="PXE50_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HDL5622800.1"
                     /translation="MQKLTFSPPLLNTPCPWCSELESLRELYACEYTGAVTTRTSMPQ
                     PYPHDWAKNQYVLFDSNAQKTASVNTQDATSLQTASLNTIGLSPNNLDTTISFVRTIS
                     NELTAPSSKPFIISVFGSPEEVGECYEKIVAFQTEVKMPLAMEINISCPNIPGEISPA
                     YSAEELSHYLHALQTSLKKLAQGDNTLPIGIKIPPFTYQNQYDELIKGLLQAVENGEN
                     LPISFITSTNTLGSSLVLNAGKAVLNSEVGTGVGGMAGTAIHALSLGNVYTIRQMLDQ
                     EPKLKHLQIIGVGGVNDKAGFERMKSVGADFVGLATALGVKGIGVFKEILSE"
     gene            complement(5945..6355)
                     /locus_tag="PXE50_001921"
     CDS             complement(5945..6355)
                     /locus_tag="PXE50_001921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005625316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2251 domain-containing protein"
                     /protein_id="HDL5622801.1"
                     /translation="MLYSVLTAHILLNEPYRNGAHSTQHEHLVVMFEIDEESGYFYAM
                     DLHQTEQPVVDSLFVFRVSDIEQNSLKEPRRLEICWSEDGYQAFLLINGYPHAVFDFR
                     QFVGYNHTKFPMPELGSMWVHKETTNELVEKWLG"
     gene            complement(6421..7731)
                     /gene="eno"
                     /locus_tag="PXE50_001922"
     CDS             complement(6421..7731)
                     /gene="eno"
                     /locus_tag="PXE50_001922"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020456663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HDL5622802.1"
                     /translation="MAKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGLAAAPSGASTG
                     SREALELRDGDKGRFLGKGVLKAVSAVNNEIANALVGKDGSAQAEIDQIMIDLDGTEN
                     KSKFGANAILAVSLATAKAAAASKGLPLYAYIAELNGTPGVYSMPLPMMNIINGGEHA
                     DNNVDIQEFMIQPVGASTLKEALRIGAEVFHNLAKVLKAKGLNTAVGDEGGFAPNLAS
                     NADALACIKEAVEKAGYVLGKDVTLAMDCASSEFYDKERNVYDMKGEGKTFTSQEFTH
                     YLEGLCKEYPIVSIEDGQDESDWEGFAYQTKVLGDKVQLVGDDLFVTNTKILKNGIEK
                     GIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQ
                     IKTGSMSRSDRVAKYNQLIRIEEALERAGTPAPFNGRKEIKGQA"
     gene            complement(7922..9100)
                     /gene="rlmC"
                     /locus_tag="PXE50_001923"
     CDS             complement(7922..9100)
                     /gene="rlmC"
                     /locus_tag="PXE50_001923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(747)-C(5))-methyltransferase
                     RlmC"
                     /protein_id="HDL5622803.1"
                     /translation="MSSLLHCSHFERGDCTSCQWIEKPYSTQLAAKEADLKRLILPFI
                     LQNKTEILPLVGSPISQFRNKAKMVVSGSVERPILGILKDQNDAQSGVDLTDCLLYPS
                     SFHRLFPILKDFIARAGLVPYNISKKKGELKYILITESQYNQSFMLRFVVRSEAKRAL
                     VERELPELLEKLPPNSVVSLNIQPQHAALLEGETEIFLTEQKVLEEHFNGIPLFIRPQ
                     GFFQTNPVVASQLYHTAQSWIEHLPIAKLWDLFCGVGGFGLHCANALQAKNSNVELTG
                     IEISASAIASATKSAEKLGLKQVKFASLDSAQFALNEAGSPPDLVIVNPPRRGIGKLL
                     AEFLNQLGSPYLIYSSCNAVSMANDFTFLTNYELHKVQLFDMFAHTAHYETLTFLVKK
                     "
     gene            complement(9093..10130)
                     /gene="nagZ"
                     /locus_tag="PXE50_001924"
     CDS             complement(9093..10130)
                     /gene="nagZ"
                     /locus_tag="PXE50_001924"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HDL5622804.1"
                     /translation="MLLIDIKDKELTQEEVEMLEHPLVSGLILFTRNFYDKAQIQALV
                     KSIRQRVKKPLLITVDQEGGRVQRFREGFTKLPAMQSFNQLATTPEQAMQLAKETGWL
                     MAAEMFALDIDLSFAPVLDLGHECKAIGDRSFGQEPAAILPVAEAFIDGMREIGMATT
                     GKHFPGHGHVLADSHLETPFDDRPKERIFNHDILPFKQLIAKGKLSAIMPAHVVYTQC
                     DSQPASGSSYWLKEVLRKQLNFNGVIFSDDLGMKGAGFMGNFVERSEKAIQAGCDLLL
                     LCNEPEGLVQVLDGLKYQPTQAQKERRLSLMKRKTVTWRELENSSRYQQTQAELTALQ
                     NNWLEWKEANV"
     gene            complement(10256..10987)
                     /locus_tag="PXE50_001925"
     CDS             complement(10256..10987)
                     /locus_tag="PXE50_001925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HDL5622805.1"
                     /translation="MFDWITNPEAWVALFTLTGLEIVLGIDNIIVISILVSRLPIEQR
                     QSARIIGLGLAMGTRILLLLSLAWMMRLVEPLFTIGNNPISGRDLILLIGGLFLIVKS
                     AMELKESISAESHEEKSESIKKASFFMVLIQIAIFDIIFSLDSVITAVAMADDIPVMV
                     IAIIIAVAVMMLAAKTIGDFVDNNPTIKNLALAFLILIGIVLVGEGFDIHIPKAAVYT
                     AMGFSVVVEMLNIKMRRNQAKLEQA"
     gene            complement(11076..11756)
                     /gene="mutH"
                     /locus_tag="PXE50_001926"
     CDS             complement(11076..11756)
                     /gene="mutH"
                     /locus_tag="PXE50_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005610420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutH"
                     /protein_id="HDL5622806.1"
                     /translation="MQLSTFSPTEQALLSKAEWLAGFTLGEIAEMLHIPIPADLKRDK
                     GWVGTLIETALGAKAGSKAEQDFAHLGIELKTIPVNQKGLPLETTFVSLAPLTQNNGI
                     IWETSHVKHKLSRVLWIPVEGERKIPLAERHIGQPILWSPTITQESRLQQDWEELMEL
                     IVLGELHKINATLGEVLQLRPKGRNNRSITSAINAKGEIVQSLPLGFYLRKHFTAEIL
                     QNFLHCPL"
     gene            complement(11848..12483)
                     /gene="lexA"
                     /locus_tag="PXE50_001927"
     CDS             complement(11848..12483)
                     /gene="lexA"
                     /locus_tag="PXE50_001927"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="repressor LexA"
                     /protein_id="HDL5622807.1"
                     /translation="MRKHLTARQQEIFDFVKNHIETTGMPPTRVEIAREIGFKSPNAA
                     EEHLKALARKGYIEMLSGTSRGIRILVEDENQAANDEDEGLPLIGKVAAGTPILAVEH
                     VENHYPVNGAMFNPSADYLLKVNGNSMEKIGILDGDLLAVHKTNTARNGQVVVARVND
                     EVTVKRLEKKGELIYLHPENDELKPIVVNPAQEYIEIEGIAVGVIRSNAWM"
BASE COUNT         3503 a         2544 c         2797 g         3672 t
ORIGIN      
        1 aggaaaaatg tgctgtggca gaacaccgat ggcaacctta cttgatggaa aacggatttg
       61 ggtggaaaag aatttaagct caaattaatc tgacagacac ggtaatttaa aacgggagac
      121 tgtcagatca agtctgatct tctacaacta agccttctca gaataaataa attttcacaa
      181 gcggtgcaac tttgcaaaaa cttcggtatt atgtagcagt tgcacaaaac cccaaattca
      241 ttaaaaccgc ttaaaaatga aatgccctaa actgattttt cagtctaggg catttattat
      301 cacatattat ggttaatagg gaaaactcac atcattgtta tgctggtgat atttttgcca
      361 aaatgcgtga tattgttttt tcaccgatgt gtttaataaa aacgggatta tcaagacata
      421 ggtcgggcaa ttccatagca ttgcacgttg tgtatccgtg ccgattttgg tgcgtaagta
      481 accaaactga tacattagac ccaatccaac cgtcacctat tctaatagca taataactaa
      541 ggtcgcatca ttaaattaaa agctcatttt ttgcaaaaaa tttcccaaat tccaccgctt
      601 gttggcgtac aataggcata attttgattt acgatggagg cagaatgtct gaaccgataa
      661 aacttacgca gttcagccac ggggcgggtt gaggctgtaa aatttcgcct aaggtgttag
      721 ggacaatttt acaaactcaa ttagaacaat ttgtcgatcc gaatttattg gtaggcaatg
      781 aaacggcgga cgatgctgcc gtctatgatt tagggaacgg gcaggccatt atcagcacca
      841 ccgatttctt tatgccgatt gtggacgccc cgtttgattt cgggcgaatt gctgctgcca
      901 atgcgattag cgatatttat gcgatgggtg gcaagccgat tatggcgatt gcgattctgg
      961 gctttccggt gaataaattg ccggctgaag tggctcaaca aattgtcgaa ggtgggcgtt
     1021 ttgcgtgcca gcaagccggt attgccttgg cgggcgggca ttcgattgat tcgcccgatc
     1081 cgattttcgg cttggctgtt accggcattg tgccgaccga acgggtgaaa cgcaatgcct
     1141 ctgcggtggc tgggtgtgag ctgtttttaa ccaagccttt ggggattggc attctaacca
     1201 cggcagagaa aaaaggtttg ttgaagcctg aacatcaaca tctggcaagc gaggtaatgt
     1261 gccaaatcaa cttgattggt tcagcgtttt ccgaactgcc tgaagtcacg gcaatgactg
     1321 atgtaaccgg ttttggctta ctcgggcatt taagcgaggt gtgtcaaggc tcgggcttac
     1381 gggcggaggt tgattttgag gatattcaag tccttgatgg cactaaggag tatattgcat
     1441 tgggagcagt tccgggtggg acaaatcgca atttcgacag ctatgggcat ttgatttcgg
     1501 caatgacgga cgagcaaaaa gcgattttgt gcgatccgca aacctctggc ggtttattag
     1561 tggcggtgct gccacaagcg gtcgaaaaag tgcaacaaat tgcaaatcgg gcaaatgtgc
     1621 cgttattcca cgttggcaga ttgctggaaa tggaacaggg caaaccacgg attgaggtaa
     1681 tttgatgttt aaaccaaatg taacaatggc ttgcgtggtg cattgtaagg gaaagtttct
     1741 gtttgtggaa gaaattgaat atggcaaacg tacccttaac cagccggcag ggcatttaga
     1801 aaaagatgaa accttgctgg agggggcaag ccgtgagctg tttgaggaaa ccggtattcg
     1861 ggcagaaatg gcaaattggg tgaaaattta tcaatggcaa gcccctcgtt cacaaaccga
     1921 tttcttgcgt tttctgtttt cggtggaact ggaagagtgg ctggagccga atccgcaaga
     1981 tgcggatatt acccaagccc tttggcttac tttagcagaa tttgaagact acattcagca
     2041 acaagggcaa tgtgccagaa gcccgttggt ggttcaatcg gtcaaagatt atttaagcgg
     2101 tgagcgttat ccattaagtt tgttgaatgc gtttgaatgg gcgagaaatg gaaaataaaa
     2161 caacaaccca atttgatgtg gtgattgtgg gcggggcagt gaccggctcg gtgctggcat
     2221 tggcgttaag tagttttact catcacaaaa tctcgattgc gatagtggaa aaatcgctgc
     2281 cggactatga acagcaaggc ggttttgatg ctcgcagtat tgccttagcc gaaggcagtt
     2341 tgcaaaaaat ggggcaaatc agaccgcttg caggctcaag tttaggcgag atgattagcg
     2401 aaatcggcac gccgattcag caaattcaag tagcggataa agggcatttt ggtaaaacga
     2461 ccttgaaagc aagcgagcag aatgtggctc aactgggtat ggtggtggaa cttgcaaaat
     2521 tcggcagaaa attgaccgct tgtcttgcac agcaagctaa tattacgctt ttttgcccga
     2581 atcaagtggt tggcattgag cgttcccaac aacattgtgg attgagcttg aaaaatggtg
     2641 agaaactaag ctgttccttg ctggtggcgg cagatggtat tcaatctcag attgcaaaac
     2701 agtgcggtgt ggaaaccgta aaagtaaggg attatgcaca atcggcaatt atcgccaatg
     2761 tggaactgag tgaatctcac caaaatcaag cctttgaata ttttacgcct caaggccctt
     2821 ttgctttatt gcctttgagc ggaaatatga tgtcgttggt gtggtgtgtg aaagagccga
     2881 acgagttaat ccaactttca gacagtgaat ttttagcccg tttgcaacaa caatttggtt
     2941 ggaagttagg gcaatttgtt cgagtgagca agcggtttgt ttatccgctc attttgcaaa
     3001 aagcccagtc gcatattcac caccgcttag cagttgtcgg caatgccgca caaatgcttc
     3061 acccggttgc tgggcaaggt ttcaacttag gcttgcgtga tttgactacc ttagcggaat
     3121 tagtggcttt ggcgtttaat caagggaaag atataggcga attttcgctc ttatcaactt
     3181 ttgagaatga gagaacgcaa gatcaagcca gaatgataaa tgctacaagc ggtctgattt
     3241 cgcttttttg ttgcgaaatg ttaccagttc aggttgtgag gaatttaggg ttattaacgg
     3301 tttcccattc aaaaatagcc agagattttg ttgctaatca ggcattaggt tggtaaaaaa
     3361 cacaaaagca gcaattttct atttgacact gtttttaaaa aggcgtatta tccaacccgt
     3421 ttaaaaatct caccaaagcc ttgaatgcaa attcaaggct ttttcctttt tagtgaaagc
     3481 ctatgaattt tgtttgccgt aaaatcggca aaaaaatttt gcctaaaatt cgcaatcgtt
     3541 tgcgaaatag gtttatagcg ttgttttcat ctgggtaact gcaatggtta catcgcaata
     3601 catcaaagag agtaaaaaat gaccacagaa aatatgagta cgccaaagca ggcgtttatc
     3661 gggctgcaaa tgctgtttgt tgcatttggg gcgttagtat tagttccgct gattaccggt
     3721 ttagatccta atgttgccct tcttaccgcc ggtgtcggta cgttaatctt ccaaatttgt
     3781 actaaacgtc aagttcctgt tttcctcgca tcgagtttcg cttttatcgc tccaatccaa
     3841 ttcggtgttc aacaatgggg aattcccgtc acaatgggag cattgctctg ttccggtttt
     3901 atttatatgg cattatctgc tttagtgaaa gcgaaagggg tgaatattct gcataaatac
     3961 ttccctccaa tcgtgattgg accggtaatt atggtgattg gtttaggtct tgctcctgtt
     4021 gcggtggata tggcaacggg taaatcggcg aatattgcct ataacaccgc tattattgtt
     4081 tcaatgataa cgctggtaac tacgctgatt gtggcggtgt ttgcgaaagg gctattaaag
     4141 ctcgtgccaa tattagcagg tttaacggtg ggatatatct tgtctgtttt tatgggattg
     4201 gtggatttta ctaaagtggt tgaagctcct tggtttagtc taccgaaagt ttccgcaccg
     4261 gaattcaaat tagatgcaat cttgtattta ttacctatcg cacttgctcc ggcagtcgaa
     4321 cacttaggcg atgtaatggc aatcagccaa gttgccggta aagattttat gaaaaaaccg
     4381 gggttacacc gcacgctttt aggtgatggt ttagcaactt cagcagctgc ggcattaggt
     4441 ggcccaccaa atacgactta ctctgaagta accggtgcgg taatgctaac caaaaacttc
     4501 aatccgaaaa ttatgacttg ggctgcgtgc tgggctatcg ctttctcatt ctgcggaaaa
     4561 atcggggcat tccttgccac tatccctact tttgtgatgg gcggtattat gatgttgctg
     4621 ttcggtgcag ttgcggttgt ggggatcaat actctaatta aagctaaagt tgatttaagc
     4681 attccacgta atctttgtat tgcttctgta gtaatgacat tcggtattgg cggtatgtta
     4741 attaacatcg gcgaattctc attaaaaggg atcagcttgt gtgcattagt cgctattgta
     4801 cttaacattg tattaccaaa agaaaaagta gaagattctg ctgctcatta atcaaaggac
     4861 gctgtggcgt cctttttgct aataaccctc tatttgtaaa taaaaaggaa taacactatg
     4921 caaaaactca cattttcacc accactttta aatacgcctt gcccttggtg ttcggagtta
     4981 gagagcttgc gtgaacttta tgcgtgtgaa tataccggtg cggtaacaac ccgtacttca
     5041 atgcctcaac catatccaca cgattgggcg aagaaccaat atgtactctt tgattccaac
     5101 gcacagaaaa cagcaagtgt gaatactcaa gatgcaacta gcttacaaac agcaagcctt
     5161 aacaccatcg gtttaagccc aaataatctg gataccacca tcagctttgt acgcaccatt
     5221 tcaaatgagc tgacagcgcc atcaagcaaa ccatttatta tttcggtgtt tggttcaccc
     5281 gaagaggtgg gggaatgtta tgaaaaaatt gttgctttcc aaactgaagt gaaaatgcct
     5341 ttggcaatgg agattaatat ctcttgcccg aatattccgg gtgaaatttc gcctgcttat
     5401 tccgcagaag aattatcaca ttacttgcac gcactacaaa cttcgctaaa aaaactggct
     5461 caaggtgata atactttacc aatcgggatt aaaattccac cttttactta ccaaaatcaa
     5521 tatgatgaat taatcaaagg cttattacaa gcggtcgaaa atggcgaaaa tttaccaatt
     5581 tcctttatta cttcaaccaa tacgcttggc tcatcgcttg tcttaaatgc tggcaaagcg
     5641 gtattaaatt cagaagtggg aacgggcgta ggcggaatgg caggaacggc aatccatgca
     5701 ctttctttgg ggaatgttta cacgattcgc caaatgttag atcaagagcc taagctcaaa
     5761 catcttcaaa ttattggtgt gggcggcgtg aatgataaag ccggctttga gcgaatgaaa
     5821 tcggttgggg cagactttgt ggggttagct accgcattag gggtgaaagg aatcggcgtt
     5881 tttaaagaga ttctgtctga ataatgaaga ggagggcgtg cattgcacgc ccgaataaat
     5941 gaaattagcc taaccatttc tccactaatt cattagtggt ttctttatgt acccacatac
     6001 tgccaagttc cggcattggg aatttggtgt ggttgtagcc gacaaattgg cggaaatcaa
     6061 acacggcgtg cgggtagccg ttgatcagta aaaaggcttg atagccgtct tcactccagc
     6121 aaatttctaa acggcgaggt tcttttaatg aattttgctc aatatcgctg acccgaaaca
     6181 caaataaact atccactacc ggctgttcgg tttggtgtaa gtccattgca taaaagtagc
     6241 cgctttcttc atcaatttca aacatcacta ctaaatgttc gtgctgggtt gaatgagcgc
     6301 cattacggta aggttcgttc agtagaatat gagcagttaa aacagagtag agcattaaat
     6361 tatccttata agtaaaatgc caccgatttc tcagtggcat ttaaatattt aatcaggcaa
     6421 ttacgcttga cctttaatct ctttacggcc gttgaacgga gccggtgtac cagcacgctc
     6481 taacgcttct tcgatacgga ttaactggtt gtatttcgct acacggtctg aacggctcat
     6541 tgaaccggtt ttgatttgac ctgctgctgt acctactgct aaatctgcaa tggttgcatc
     6601 ttcagtttcg cctgaacggt gagagataac tgcggtgtaa cctgcatctt tcgccatttt
     6661 gattgcagct aaagtttcag ttaaagaacc gatttggttg aatttgatta agattgagtt
     6721 tgcgatacct ttctcaatac cgtttttcaa gattttggta ttggttacga ataagtcatc
     6781 accaactaat tgtactttgt cgcctaatac tttagtttgg tatgcgaaac cttcccagtc
     6841 agattcgtct tgaccatctt cgatagacac gattgggtac tctttgcata agccttctaa
     6901 gtagtgagtg aactcttgtg aagtaaaggt tttgccttcg cctttcatat cgtacacatt
     6961 gcgttctttg tcgtagaatt cagatgatgc acagtccatc gctaaagtta cgtctttacc
     7021 taacacatag cctgcttttt ctaccgcttc tttaatgcac gctaatgcgt ctgcgtttga
     7081 agccaagttt ggtgcgaaac caccttcgtc acctacagca gtatttaagc ctttcgcttt
     7141 taatactttt gcaagattgt ggaatacttc agcaccgata cgaagagctt cttttaatgt
     7201 agaagcacct accggttgaa tcataaattc ttgaatgtcc acgttgttgt cagcgtgttc
     7261 accaccattg atgatgttca tcattggtaa tggcattgag taaacacccg gtgtgccgtt
     7321 taattcagca atgtatgcgt aaagcggtaa gccttttgaa gcggctgctg cttttgctgt
     7381 tgctaaagaa accgctaaga tagcgtttgc accgaatttt gatttgtttt ctgtgccatc
     7441 taaatcgatc ataatttggt cgatttcagc ttgtgcagaa ccgtctttgc ctactaatgc
     7501 gtttgcaatt tcgttattta cggcagaaac cgcttttaat acacctttac ctaagaaacg
     7561 acctttgtcg ccatcacgta attctaatgc ttcacgtgaa ccggtagaag cacctgatgg
     7621 agcggctgct aagcctacaa aaccaccttc taagtgaact tctgcttcta cagttgggtt
     7681 accacgagag tcgatgattt cacgaccgat tactttaaca attttagcca ttgttgatgt
     7741 cctctaatat acgagttaat agaaaaaaga ataggtatat agtaaagcga ttttctgctt
     7801 ttgtcttgga aaaactgatt gagtggcaga aaatttgcca ctaatttgat ctaagactat
     7861 attcgcctga gattatagca acctttgcaa aaaacggcaa aaatttgccc gcttgtaatg
     7921 cttatttttt gactaaaaaa gtcaaggttt cataatgtgc tgtgtgagca aacatatcaa
     7981 acagctgcac tttgtgtagt tcgtaatttg tcaaaaatgt aaaatcgttc gccattgaga
     8041 cggcattaca actggagtaa atcaaataag gtgagcctaa ttgatttaaa aattctgcta
     8101 atagtttgcc gataccacgt cgaggtgggt tcacaatcac taaatcgggt ggagaaccag
     8161 cttcatttaa agcaaattgt gcagaatcta atgaggcaaa ttttacctgc tttaggccga
     8221 gtttttcagc cgatttggtc gcacttgcaa tagctgaggc tgaaatctca atgcctgtca
     8281 gctccacgtt cgagttcttc gcttgcaagg cgttggcaca atgtaagccg aaaccaccga
     8341 caccgcagaa caagtcccac aatttagcaa taggtaaatg ctcaatccag ctttgtgctg
     8401 tgtggtaaag ctggcttgct accacagggt tagtttggaa aaagccctga gggcgaataa
     8461 atagcggtat gccgttaaaa tgttcttcca gcactttttg ttcggtgagg aaaatctcag
     8521 tttcgccttc taaaagagca gcgtgttggg gctgaatatt cagactaact actgagttgg
     8581 gtggcagttt ttccaacagt tcgggcaatt cccgttcaac caatgcacgc tttgcttcac
     8641 tacgaaccac aaaacggagc ataaatgatt gattatattg gctttcggta atcagaatat
     8701 attttagctc accttttttc ttactgatgt tatacggcac taaaccagct cgagcgataa
     8761 aatctttcaa aatcggaaaa agtctatgaa atgaggacgg gtagagcaga cagtcggtta
     8821 aatccacccc gctttgagca tcattttgat cttttaaaat gcctaaaatc gggcgttcta
     8881 cactgccgga gaccaccatt ttcgctttgt tacgaaattg cgaaattggc gagccgacaa
     8941 gcggtaagat ttccgtttta ttttgcaaaa taaacggcaa aatcaaccgc ttgagatcgg
     9001 cctctttggc ggctaattgc gtgctgtatg gcttttcaat ccactggcac gaagtacagt
     9061 cgccacgctc aaaatgcgaa caatgcaaca agctagacat tcgcttcctt ccattccagc
     9121 cagttgtttt gtaaggccgt taattcagcc tgagtttgtt ggtagcgaga gctgttttcc
     9181 agctctcgcc aagtcacggt tttgcgtttc attaaagaaa ggcgacgttc tttttgtgct
     9241 tgagtcggct gatatttcag cccgtctaac acttgcacca ggccttcagg ctcgttacaa
     9301 aggagcaata aatcacagcc ggcttggatt gctttttcag aacgctcgac aaaattgccc
     9361 ataaagcccg cacctttcat tcccaaatcg tcagagaata tcacaccgtt aaagttcagc
     9421 tgtttacgca atacctcttt aagccaatag cttgaaccgc ttgccggctg gctatcacat
     9481 tgggtgtaaa cgacgtgggc aggcataatg gcagagagtt ttcctttggc aataagctgt
     9541 ttgaacggca gaatatcgtg attaaaaatc cgctctttcg ggcgatcatc aaacggggtt
     9601 tctaaatgcg aatcggctaa aacgtgtcca tgaccgggga agtgtttgcc ggtggtcgcc
     9661 ataccgattt cacgcattcc gtcaataaag gcttcggcaa caggcaaaat cgctgctggc
     9721 tcttgcccga atgagcgatc gccaatcgct ttgcattcgt gtcctaaatc cagtaccgga
     9781 gcgaaactga ggtctatatc gagggcaaac atttctgctg ccatcaacca gccggtttct
     9841 ttcgctaatt gcattgcttg ctctggcgtt gtggcaagtt ggttaaaaga ttgcattgcc
     9901 ggcagtttag taaagccttc acgaaagcgt tgcacccgac cgccttcttg gtcgacagta
     9961 ataagcaacg gttttttcac ccgctggcga atggatttca ctaatgcctg aatttgtgct
    10021 ttgtcgtaga aattacgggt gaataaaatt agcccggaaa ctaaagggtg ttccagcatt
    10081 tcgacttctt cttgagtcag ttctttatct ttaatatcaa tcagtaacat aattttcgtt
    10141 gagctatttg caaaaaaatg agcagatatg accgcttgtt gtgcctattc tacattaaaa
    10201 agcccttgat gttgatcaag ggcgaatgat taagggcata aatgagacag agcaattatg
    10261 cttgttctaa tttagcttgg ttacgacgca tttttatgtt gagcatttca accacaaccg
    10321 agaagcccat tgccgtataa accgctgctt ttggaatatg aatatcaaaa ccttcgccga
    10381 ctagtacaat accgattaaa atcaagaacg ctaaagcgag atttttaatg gttgggttgt
    10441 tatctacaaa gtccccaatg gttttcgctg ctaacatcat taccgcaact gcaatgataa
    10501 tcgcaataac cattaccgga atatcatctg ccattgccac agcagtaatg actgaatcaa
    10561 gggagaaaat aatatcaaaa attgcaattt gaattaacac cataaaaaag ctggcttttt
    10621 taatggattc gcttttttct tcgtgagatt cggcagaaat ggattctttc agctccattg
    10681 cacttttaac aatcaggaat aatccaccga tgagtagaat gagatctcta cctgaaattg
    10741 gattgttgcc aatagtgaaa agaggctcga ccaaacgcat catccaagca agcgagagaa
    10801 gcaataaaat acgggttccc attgccagcc ccaagccgat aattcgggca gattggcgtt
    10861 gttcaatagg taaacgggaa acgagaatac tgatgacgat gatgttatca atgcctaata
    10921 cgatttcaag cccggtaagt gtaaagagcg caacccaagc ttcaggattt gtgatccagt
    10981 caaacataaa aatgtccttt taaaaataag ggattaagtg atattttcta tcaaatagaa
    11041 ttaaagccga catcttatag agtgtgagga caaatttaaa gggggcaatg caaaaagttt
    11101 tgtaaaattt cggcggtaaa atgtttacgc aaatagaaac caagagggag agattgaaca
    11161 atctcccctt tagcgttgat agcagaggtg atagagcggt tatttctacc tttgggtctg
    11221 agttgtaaca cttcgcctaa ggttgcatta attttatgca gttcacctaa cacaatcaac
    11281 tccattaatt cctcccaatc ttgctgtagg cgggattctt gtgtgatagt cggagaccat
    11341 aaaatcggct gaccgatatg gcgttcggca aggggtatct ttcgttcccc ttcaaccgga
    11401 atccaaagca cacgggaaag cttatgttta acgtgggagg tttcccaaat aataccgttg
    11461 ttttgggtta aaggagcaag gctgacgaat gtggtttcca gcggtaatcc tttctgattg
    11521 accggaatgg ttttcagctc aatgcctaaa tgtgcaaaat cctgttcggc tttactgccg
    11581 gctttcgcac ctaaagcggt ttcaatcaga gtaccgaccc agcctttatc tcgtttcaga
    11641 tctgctggta tcggaatatg aagcatctcg gcaatttcac ctaaagtgaa ccctgccagc
    11701 cattccgctt tgcttaataa tgcctgctcg gttggagaga atgtagataa ttgcattgca
    11761 cttagttaat tagactaaac tggcaagcgg tcaaatttag gcagaaattt gcaaaaaatt
    11821 actaaaaaat aaccgcttgt gaggaaatta catccaagca ttactgcgaa taacgcctac
    11881 tgcaatgcct tcaatttcaa tatattcttg agcagggttt actacaatcg gttttaattc
    11941 atcgttttca gggtgtaagt aaattaattc acctttcttc tctaagcgtt taacagtcac
    12001 ttcatcattt acccgagcaa ccaccacttg cccgttacga gcggtattgg ttttatgaac
    12061 ggctaatagg tcaccgtcta aaataccgat tttttccatt gaattgccat ttactttgag
    12121 taaataatca gcacttggat taaacatcgc accattcacc gggtaatggt tttcaacgtg
    12181 ttcaaccgct aaaataggtg tgccagcagc tactttgcca atcaacggta agccttcatc
    12241 ttcatcgttg gcagcttggt tttcgtcttc gactaaaatg cgaattccac gagatgtacc
    12301 tgataacatt tcaatatagc ctttacgagc aagggctttt aagtgttctt ctgccgcatt
    12361 aggtgattta aagccgattt cacgggctat ttctactcgg gttggtggca taccggtggt
    12421 ttcaatatgg tttttgacga aatcaaaaat ttcttgctga cgggcagtta gatgtttacg
    12481 cattttaagt taatcctcac tgtctttata tacaga
//
LOCUS       DANLZQ010000083        12492 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.083, whole genome shotgun sequence.
ACCESSION   DANLZQ010000083 DANLZQ010000000
VERSION     DANLZQ010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 12492)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12492)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12492
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.083"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            22..747
                     /gene="fkpA"
                     /locus_tag="PXE50_001928"
     CDS             22..747
                     /gene="fkpA"
                     /locus_tag="PXE50_001928"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HDL5622808.1"
                     /translation="MLKTKLSLFTLIVGTLFSTNVMAEEKADPKFVDDSSYAVGVLMG
                     KNINGVIESQKDIFTYNQDKILAGVQDTLKKTGKLTDEDLQKQLKSLDAYLSAKEAKI
                     NEEKTKATVAAGDKFRADYKKQSGVKETASGLLYKIEKAGEGNSPKAEDTVKVHYKGT
                     LTDGTVFDSSYDRGEPIEFQLNQLIPGWIEAIPMLKKGGKMEIVVPPALAYGDRAAGK
                     IPANSTLKFEIELLDFKAADAKK"
     gene            844..1500
                     /locus_tag="PXE50_001929"
     CDS             844..1500
                     /locus_tag="PXE50_001929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL5622809.1"
                     /translation="MTKKFTPFSDEDHAILASYFPMVDGIAALIGEHCEIVLHSLEFL
                     EHSAIYIANGHNTNRKIGSPITDRALKSLHHMATDSVSKPYFTKAKGGVLMKSITIAI
                     RNGKQHVIGLLCININLEVPTSQFLNSFIAPVDTASEVTFASSVEDLVSQTIQTTIDD
                     VMADRQISNNNKNRQIVISLFEKGIFDIKDSINQVAEKLDISRHTVYLYIRQIKQDND
                     "
     gene            1500..1877
                     /gene="tusD"
                     /locus_tag="PXE50_001930"
     CDS             1500..1877
                     /gene="tusD"
                     /locus_tag="PXE50_001930"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusD"
                     /protein_id="HDL5622810.1"
                     /translation="MDYVLAIKSPVYGSQGAFLAYQVAEELLKANHTICQIFFFQEGV
                     SNANALVNPASDEVNLVEMWKKLAKLHRLPLHLCIAAAQRRGVVDEQISANATHNLAE
                     GFTLAGLGEFSQAVLKADRLLTF"
     gene            1879..2250
                     /gene="tusC"
                     /locus_tag="PXE50_001931"
     CDS             1879..2250
                     /gene="tusC"
                     /locus_tag="PXE50_001931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusC"
                     /protein_id="HDL5622811.1"
                     /translation="MKKYKLAFLFTQPPFGSAVSREGLDALLAASAFCDEQEIAILFI
                     NDGVFNLIADQQPEKLLQKDHISTFKLLELYDLTECFICQESVSLRGLDNADWLLRML
                     QFKTHAEMIALLNQAEKVMTF"
     gene            2260..2535
                     /gene="tusB"
                     /locus_tag="PXE50_001932"
     CDS             2260..2535
                     /gene="tusB"
                     /locus_tag="PXE50_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusB"
                     /protein_id="HDL5622812.1"
                     /translation="MLYTLSKANYDEETLNFFFSHLSENDAVVLWQDGVLQAVKSPQF
                     FAKLPRCYLLAQDVQARGLQEKLTAFQCISLSELVKLTAVYFPQVAL"
     gene            2651..3550
                     /locus_tag="PXE50_001933"
     CDS             2651..3550
                     /locus_tag="PXE50_001933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622813.1"
                     /translation="MVMAEENNTWVDKKHETVSTTLDRWANNINSWLGDADPDKPGTA
                     SLRVMLDSRWDKHDKFTYKPRVRGKIKLPILKKHLNVVFGDDELDNELTDKNHAGKLY
                     KNVNPNKRYNSREARDSNSSIGLRWSDGIKALGIETDLDAGIRSGSDIFGRLRISKDW
                     KITDQFSTRLEQIYRYGSESKHYLRTNFENKYTETDTTFIMNHTNFEYRHDVDEERSW
                     GNSLYRQHNFKPLTHISYGISMGGRLDKELSKFNYWGPFVSYRQPIWRNWLFIQPEIS
                     FYNDKDKDRKHFIQTFVRLEAIF"
     gene            3900..7925
                     /gene="rpoB"
                     /locus_tag="PXE50_001934"
     CDS             3900..7925
                     /gene="rpoB"
                     /locus_tag="PXE50_001934"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HDL5622814.1"
                     /translation="MAYSYSEKKRIRKSFGKRPQVLNVPYLLTIQLDSFEKFIEKDPE
                     GQQGLEAAFRSVFPIVSNNGATELQYVSYELGEPVFDVRECQIRGTTYAAPLRVKLRL
                     VSYDREAAAGTVKDIKEQNVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSD
                     KGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFARIDRRRKLPATIILRALGYTTE
                     EILNLFFEKIKFEIADNKLLMTLVPERLRGETASFDIAANGKVYVEMGRRITARHIRA
                     LEKDNVTQIEVPVEYIVGKVAAQDYVDLSSGEVICPANMEISMEMLANLSQAGYNQIE
                     VLFTNDLDHGPYISETLRVDPTYDRLSALVEIYRMMRPGEPPTKEAAEALFDNMFFSA
                     ERYDLSAVGRMKFNRSLEIPEGVGSGILSNDDIIGVMKKLIEIRNGRGEVDDIDHLGN
                     RRIRSVGEMAENQFRIGLVRVERAVRERLSLGDLDGVTPQDLINAKPISAAVKEFFGS
                     SQLSQFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHPTHYGRLCPIETPEG
                     PNIGLINSLSVYARTNNYGFLETPFRKVVNGQVTEEIEYLSAIEESNNIIAQANSNLD
                     ENFRFTDTYVTCRQQGESGLFKPEEVQYMDISTQQVVSVAAALIPFLEHDDANRALMG
                     ANMQRQAVPTLRADKPLVGTGMEKPIALDSGVAIVAKRGGTVQYVDASRIVVKVNEDE
                     TIPGEAGIDIYNLIKYTRSNQNTCINQVPCVNLGEPVARGEILADGPSTDLGELALGQ
                     NIRVAFMPWNGYNFEDSMLVSERVVQEDRFTTIHIQELSCVARDTKLGAEEITADIPN
                     VGESALSKLDESGIVYIGAEVKGGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVK
                     DSSLRVPNGTSGTVIDVQVFTRDGVEKDKRAKEIEEMQLCEAKKDLAEELEILEAGLF
                     TRVRNLLIEGGVKESALDGVAREKWLEQTLEDEAKQNQLEQLAEQHEELRKEFERKLE
                     IKRNKIIQGDDLAPGVLKVVKVYLAVKRQIQPGDKMAGRHGNKGVISKINPVEDMPYD
                     ENGQPVEIVLNPLGVPSRMNIGQILETHLGLAAHGIGDQIDKMIKQQQEVAKLREYMQ
                     KAYDLGHGSQVVDLSTFSDEEVMRLAQNLRKGLPLATPVFDGAHESEIKGLLELGGLP
                     TSGQITLYDGRTGEKFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKA
                     QFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGTHYMEPGIPE
                     SFNVITKEIRALAIDMELDEA"
     gene            8188..12471
                     /gene="rpoC"
                     /locus_tag="PXE50_001935"
     CDS             8188..12471
                     /gene="rpoC"
                     /locus_tag="PXE50_001935"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HDL5622815.1"
                     /translation="MKDLVKFLKAQTKSNEDFDVIKIGLASPDKIRSWSFGEVKKPET
                     INYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRER
                     MGHIELACPVAHIWFLKSLPSRIGLILDMPLRDIERVLYFESYVVTEPGMTDLEKNQL
                     LTEEQFMDAEERWGDEFEAKMGAEGIQALLRDLDLEHQCETLREELQETNSETKRKKI
                     TKRLKTLEAFLQSGNKPEWMVMTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINR
                     NNRLKRLLDLVAPDIIVRNEKRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKG
                     KQGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFRPFIYSKLENRGIA
                     STIKAAKKMVEREDPIVWDILAEVIREHPILLNRAPTLHRLGIQAFEPLLIEGKAIQL
                     HPLVCAAFNADFDGDQMAVHVPLTLEAQLEARALMMSTNNVLSPASGDPIIVPSQDVV
                     LGLYYMTREKVNGKGEGMYFLDPREAEKAYRTGQAELHSRVKVRVTEYEKNEAGELEA
                     KTSLVDTTIGRSILWMIAPKGMPFSLFNQTLGKKAISKLINESYRRLGLKESVVLADQ
                     IMYTGFAYAARSGASVGIDDMVIPEQKYAIIEAAEAEVAEIQEQFNGGLVTAGERYNK
                     VIDIWAAANERVAKAMMENLSTEEVINREGNPEKQASFNSIFMMADSGARGSAAQIRQ
                     LAGMRGLMARPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLT
                     RRLVDVAQDLVIIEDDCGTHEGIVMTPLIEGGDVKEALRDRVLGRVVAEDVLKPGTDE
                     VLIPRNTLLDEKWCDVVDRESVDVIKVRSVVTCDTDFGVCAKCYGRDLARGHLINQGE
                     AVGVIAAQSIGEPGTQLTMRTFHIGGAASAAAKESSIQVKNAGTIKLTNAKFVTNKEG
                     KIVLTSRNTELTVIDTFGRTKENYKVPYGAVLSKHDGAEVAVGEVVANWDPHTMPVIS
                     EVSGRIQFSDIVDGLTVTRQTDELTGLSSIVVQDVGERATAGKDLRPALRLVDSNGKD
                     ILIPGTDVAAQYFLPGKAIVTLDDGAEIEVGEALARIPQESVGTKDITGGLPRVADLF
                     EARKPKEPAILAEISGIVSFGKETKGKRRLVITPAEGEAFEEMIPKWRQLNVFEGEMV
                     QRGDVISDGAETPHDILRLRGVHAVTDYIVNEVQEVYRLQGVKINDKHIEVIVRQMLR
                     KAVITNAYDSEFLEGEQVEVARVKIANRKRAEEGKPLVEFERELLGITKASLATESFI
                     SAASFQETTRVLTEAAVAGKQDELRGLKENVIVGRLIPAGTGFAYHQARAKKRAQLEA
                     GIAVVPEFEAPAAKANSFVTDADIEAEFEFVADDATQSLAALLNAGEEE"
BASE COUNT         3767 a         2418 c         2878 g         3429 t
ORIGIN      
        1 ttatttttat aaggaaaaat tatgttaaaa accaaattat cattatttac tcttattgtt
       61 ggcacacttt ttagtacaaa tgtgatggca gaagaaaaag cagatcctaa atttgtggat
      121 gattcctctt atgccgtggg tgtattaatg ggtaaaaata ttaatggtgt gattgagtca
      181 caaaaggata tttttaccta taaccaggat aaaatcttag ccggtgttca ggacacctta
      241 aagaaaaccg gtaaattaac cgatgaagat ttgcaaaagc agttaaaatc gttagatgcc
      301 tatttatctg cgaaagaagc aaagattaac gaagaaaaaa ccaaagcaac ggtagctgca
      361 ggcgataaat tccgtgctga ttataaaaaa cagtctggcg taaaagaaac ggcttcaggc
      421 ctgttatata aaattgaaaa agcaggtgaa ggcaattcac caaaagcgga agatactgtg
      481 aaggtgcatt acaaaggcac tttgactgat ggcacggtat ttgacagctc ttacgaccgt
      541 ggtgagccga ttgaatttca gttaaatcaa ttaattccgg gttggattga agcgattcct
      601 atgttgaaaa aaggcggtaa gatggaaatt gtagtgccac ctgcattagc ttatggtgat
      661 cgtgccgcag gcaaaattcc agcaaattca accttgaaat ttgaaattga attattagat
      721 tttaaagcag cagatgctaa gaaataattc gttattcctt aattattgaa gatacgtaag
      781 cggttagatt tattataata tttgcaaaaa atgtgataaa actaaccgct tgtaatttgt
      841 attatgacca aaaaatttac gcctttttct gacgaagatc acgccattct tgcttcttac
      901 tttccgatgg tagatgggat tgcggcactg attggtgagc attgcgaaat tgtattgcat
      961 tcgttagagt ttctggaaca ttcggcaatt tatattgcta acggacacaa tactaaccgt
     1021 aaaatcggct ctccgattac tgaccgtgca ttgaaatcgc tgcatcatat ggcaacggat
     1081 agcgtctcca aaccttattt taccaaggca aaaggtggcg ttttaatgaa gtctatcact
     1141 attgcgattc gtaatggtaa acagcacgtt atcgggttac tgtgcattaa tattaatttg
     1201 gaagtgccta cctcacagtt tctcaattct tttattgccc ctgtagatac cgcttcagaa
     1261 gttacttttg ccagttcagt agaagatttg gtttcacaaa cgattcaaac gaccattgat
     1321 gatgtgatgg cagatcgtca aatttctaac aataataaaa atcgtcaaat tgtgatttcg
     1381 ttatttgaga aagggatttt tgatattaaa gattccatta accaagtagc ggagaagctg
     1441 gatatttcac gccatactgt gtatctctat attcgtcaaa ttaagcagga caatgattaa
     1501 tggattatgt attagcgata aaatcaccgg tttatggttc acaaggggca tttttagcct
     1561 accaagtggc ggaagaatta ttaaaagcca atcatacaat ttgccaaata ttcttttttc
     1621 aagaaggcgt gagcaatgct aatgccttag tgaatccagc aagcgatgaa gtgaatttag
     1681 tcgagatgtg gaaaaaattg gctaaattgc accgcttgcc tctgcatttg tgcattgctg
     1741 ctgcccagcg tagaggcgtg gtggatgagc aaatctcagc taatgcaaca cataatttag
     1801 ccgaaggatt taccctagcc gggttaggcg aatttagcca agcagtatta aaagcggatc
     1861 gattactgac tttttaagat gaagaaatat aaacttgcct ttttatttac ccagccacct
     1921 tttggttcgg cagttagccg tgaggggcta gatgccttgc ttgcagctag tgctttttgt
     1981 gacgagcaag agatagctat cctctttatc aatgatggcg tatttaatct cattgccgat
     2041 caacagccgg aaaaactctt acaaaaagat catatttcca ccttcaaatt attggagttg
     2101 tatgacttaa ctgaatgttt tatttgccaa gaaagtgtaa gtttacgagg gctggataat
     2161 gcagattggt tactgcgaat gcttcaattt aaaactcacg ctgagatgat cgcattgctc
     2221 aatcaagctg aaaaagtaat gacgttttaa ggaatattta tgctttatac cctttccaaa
     2281 gcgaattatg atgaagaaac cttaaacttc tttttctcac atcttagtga gaacgatgcg
     2341 gttgttctgt ggcaagatgg cgtgctacaa gcggtcaaaa gtccgcaatt ttttgcaaaa
     2401 ttgccccgtt gctatttatt ggcacaagat gtgcaagctc gaggattgca agagaagctc
     2461 actgcatttc agtgcatttc attatccgaa ttagtcaaat taacagcggt ttattttccc
     2521 caggttgcac tgtaacctag agaggatatt ttttgtaata ccaaataatt tagattatga
     2581 tgtgattcct aaaaaggaga atattatgaa aacaaaatgt cttattccgc tactagcact
     2641 tacacctgtt atggtgatgg cagaagaaaa taacacttgg gtagacaaga aacatgaaac
     2701 agtaagcact accttagatc gttgggcaaa caatattaac agttggctag gtgatgcaga
     2761 cccagataaa ccgggaacgg cttctttacg ggtaatgtta gatagccgtt gggataaaca
     2821 cgataaattt acttataagc cccgtgttcg tggtaaaatc aaactcccta tcttgaaaaa
     2881 gcatctaaat gtcgtatttg gtgatgacga actggataat gagcttaccg ataaaaatca
     2941 tgctggaaaa ttgtataaaa acgtcaatcc aaataaacgc tataactctc gtgaagcgag
     3001 agattcgaac tcttctatcg gtttacgttg gtctgatggc attaaggctt tagggattga
     3061 gaccgattta gatgctggta ttcgttcggg aagcgatatt ttcgggcgtt tacgcatcag
     3121 taaagattgg aaaatcaccg accagttcag tacccgccta gagcaaattt atcgttacgg
     3181 ttcagagagc aagcactatt tacgtactaa ctttgaaaat aaatataccg aaacggatac
     3241 cacctttatt atgaaccaca ccaattttga atatcgtcat gatgtagatg aagaaagaag
     3301 ttgggggaat agtttatatc gtcaacataa cttcaaacca ctcacgcaca tcagctatgg
     3361 tatcagtatg ggggggcgtt tagataaaga gttatcaaaa tttaactatt ggggtccatt
     3421 tgtctcctat cgtcaaccaa tctggcgcaa ctggctcttt atccagcctg aaatcagttt
     3481 ttataacgac aaagataaag atcgtaagca ctttattcag acatttgtac gtttagaggc
     3541 tatcttctag ctattaagcc tcaagtagaa tcttggggct tgtttttgca agcggtcaat
     3601 ttcttgccaa aatttacaaa atccgctata attcctaacc atttttagca aaaattggct
     3661 gacggcttga ccggtcagcc ttttgtgctt gaacgcaagg gctgattttg tcattttaat
     3721 cagcaaaatt tgcaaatttc ctgcccaatt tgaccgcttg cagtagcgat ttctgactgc
     3781 ttgattggcg attggaaaat gacatctcgt acagttttta taatgccact tccaaccgag
     3841 tctttcgtgt cggattgtgt aatctcaacc aaaatatatt tcagaggcta tcttaaaaaa
     3901 tggcatattc atattccgag aaaaagcgta tccgtaagag ctttggcaaa cgcccacaag
     3961 ttctgaacgt accttatcta ttaacaattc agcttgattc ttttgaaaaa tttatcgaaa
     4021 aagatcctga agggcagcaa ggtttagaag cggcattccg ttctgttttc ccgattgtga
     4081 gcaacaatgg tgcaacagaa ttacaatacg tttcttacga attaggcgag ccggtgtttg
     4141 acgtgcgtga gtgccaaatt cgtggtacaa cctacgctgc accattacgc gtgaaattgc
     4201 gtttagtctc ttacgatcgt gaagccgcag ccggtacggt aaaagacatt aaagagcaaa
     4261 acgtgtatat gggcgaaatc ccattaatga ccgataacgg tactttcgtg attaacggca
     4321 ccgagcgtgt tatcgtttct caattacacc gtagcccagg tgtgttcttc gattctgaca
     4381 aaggtaaaac ccactcttcg ggtaaagtgc tttataacgc acgcattatc ccttaccgtg
     4441 gttcttggtt agatttcgag tttgatccga aagataactt atttgcccgt atcgaccgcc
     4501 gtcgtaaatt gccggcaacc attattctac gtgcattagg ctacaccacc gaagaaatct
     4561 taaatttatt cttcgagaaa attaaatttg aaattgccga taataaatta ttgatgacgt
     4621 tagtgcctga gcgtttaaga ggcgagactg catcatttga tattgcagca aacggcaaag
     4681 tatatgttga aatgggtcgc cgtattaccg ctcgtcatat ccgtgcgtta gaaaaagaca
     4741 atgtgaccca aattgaagtg ccggtggaat atattgtcgg caaagtagcg gctcaagatt
     4801 acgttgattt atcttcaggt gaagtgattt gcccggcgaa tatggaaatc tcgatggaga
     4861 tgttggcgaa tttatcacaa gccggttaca accagatcga agtattattt accaacgatt
     4921 tagaccacgg tccatatatt tctgaaacct tacgtgttga tccaacttac gaccgtttaa
     4981 gtgcgttggt tgaaatctat cgtatgatgc gtccgggcga accaccaacg aaagaagcgg
     5041 cagaagcatt attcgataat atgttcttct cggcagagcg ttatgattta tcggcagtag
     5101 gtcgtatgaa attcaatcgc tcgttagaaa ttccggaagg cgtaggcagc ggtattttaa
     5161 gcaacgatga catcatcggt gtgatgaaaa aattaatcga aatccgtaac ggtcgtggtg
     5221 aagtggatga tatcgaccac ttaggtaacc gtcgtatccg cagcgttggt gaaatggcag
     5281 aaaaccaatt ccgcattggt ttggtgcgtg tagaacgtgc ggtgcgtgag cgtttatctt
     5341 taggcgattt agatggtgta acaccacaag atttaatcaa cgctaaaccg atttcagcag
     5401 cagtgaaaga gttctttggt tcatcacaac tttcgcaatt tatggaccaa aacaacccgc
     5461 tttcagaggt aacacataaa cgccgtatct cggcattagg cccgggtggt ttaacccgtg
     5521 agcgtgccgg ctttgaagtg cgtgacgtac acccgactca ctatggtcgt ttatgtccaa
     5581 tcgaaactcc tgaaggcccg aatatcggtt tgatcaactc actatcggtg tatgctcgta
     5641 ctaataacta cggtttctta gagactccat tccgtaaagt ggtgaatggt caagtaaccg
     5701 aagagatcga gtatttatct gcgattgaag aaagcaacaa tatcattgca caggcgaact
     5761 caaacttaga tgagaacttc cgttttaccg atacttatgt aacttgccgt cagcaaggcg
     5821 aatcgggctt attcaaaccg gaagaagttc aatatatgga catctcaacc caacaagtgg
     5881 tttctgtggc tgcggcgtta attccgttcc ttgagcacga cgatgcgaac cgtgcgttaa
     5941 tgggtgcgaa catgcaacgt caggcagttc caaccttgcg tgcggacaaa ccattagtcg
     6001 gtaccggtat ggaaaaacca attgctcttg actcaggtgt agcgattgtc gcaaaacgtg
     6061 gtggtacggt gcagtatgtt gatgcgtcac gcattgtagt gaaagtaaat gaagatgaaa
     6121 ccattccggg cgaagcgggt atcgatattt ataacttaat caaatacacc cgttcaaacc
     6181 aaaacacctg tatcaaccaa gtaccttgtg tgaacttggg tgagccggtt gctcgtggtg
     6241 aaatcttagc ggacggtcct tcaacagact taggtgaatt ggcattaggt caaaatatcc
     6301 gtgtggcatt tatgccttgg aacggttata acttcgaaga ctcaatgtta gtttctgagc
     6361 gtgtggtaca agaagatcgc tttaccacta tccacattca agaattatct tgtgtggcgc
     6421 gtgataccaa attaggtgca gaagagatca ccgctgatat tccaaacgtg ggtgaatctg
     6481 cattaagcaa attagatgaa tcaggtatcg tttacatcgg tgcagaagtg aaaggtggcg
     6541 acatcttagt aggtaaagta actcctaaag gtgaaaccca attaacaccg gaagaaaaac
     6601 tattgcgtgc gatcttcggt gaaaaagcct ctgatgtgaa agattcatca ttgcgtgttc
     6661 caaacggtac ttcaggtacg gttatcgatg ttcaagtatt tacccgtgat ggcgtagaga
     6721 aagataaacg tgcgaaagaa atcgaagaga tgcaactgtg tgaagcgaag aaagacttag
     6781 cggaagagtt ggaaatctta gaagccggtt tatttactcg tgttcgcaac ctattaattg
     6841 aaggcggcgt aaaagaatct gcattagatg gcgttgctcg tgaaaaatgg ttagaacaaa
     6901 cccttgaaga cgaagcgaag caaaatcagt tagaacagtt agcggaacag cacgaagagt
     6961 tacgcaaaga atttgaacgt aaacttgaga tcaaacgcaa caaaattatc caaggcgacg
     7021 atttagcacc gggtgtgtta aaagtagtga aagtttacct tgcggtgaaa cgccaaatcc
     7081 agccgggtga taagatggcg ggtcgtcacg gtaacaaagg ggttatctcg aaaatcaacc
     7141 ctgtggaaga tatgccatac gatgaaaacg gtcagccggt tgaaatcgta ttgaacccgc
     7201 tgggcgtacc gtctcgtatg aacatcggtc agatcttaga aacccactta ggcttagcgg
     7261 ctcatggtat cggtgatcag attgataaga tgatcaaaca gcaacaagaa gtggctaaat
     7321 tacgtgaata tatgcaaaaa gcctacgatt taggtcacgg ctcacaagtc gttgatttaa
     7381 gcactttctc tgatgaagaa gtgatgcgtt tagcgcaaaa cttacgcaaa ggcttaccgc
     7441 ttgctactcc ggtattcgat ggtgcacacg aaagcgaaat caaaggctta ttagagttag
     7501 gcggcttacc gacttcaggt cagatcacac tttatgatgg tcgtaccggt gagaaatttg
     7561 agcgtccggt aaccgttggt tatatgtata tgctcaaatt gaaccacttg gttgatgata
     7621 aaatgcacgc tcgttcaacc ggttcttata gccttgttac tcaacaacca ttgggtggta
     7681 aagctcaatt cggtggtcag cgtttcggtg agatggaggt ttgggcatta gaagcatacg
     7741 gtgcggctta tactcttcaa gaaatgctta cggtgaaatc ggacgatgtg aacggtcgta
     7801 cgaagatgta taaaaacatt gtagatggta cacattatat ggagccgggt atccctgaat
     7861 cctttaacgt aattaccaaa gagatccgtg cattagcaat tgatatggag ctggacgaag
     7921 cgtaatggtt tcactctccc ccttgatggg ggagagacag gcaaaggatt tgttcagaat
     7981 cctttggcag agagagggtg atgcaagcgg tgtaaatttg ctaaattttt gcaaaaatcg
     8041 accgcttacc ctctccctga ttttgcttct gaacgaggca aaatctatcc ctctcccaca
     8101 aggggagagg gtttaaaatc gcaaccaaat tcgtagagtg gatattcttt ccaccaaaca
     8161 aaacaacctc aaactagggg caaaaaagtg aaagacttag tgaagttttt aaaagcacaa
     8221 acaaaatcga acgaagattt tgatgtgatt aaaattggtt tagcatcacc ggacaagatc
     8281 cgttcttggt cttttggtga agtgaaaaaa ccggaaacca ttaactatcg taccttcaaa
     8341 ccggagcgtg atggtttatt ctgtgcacgt attttcgggc cggtaaaaga ttacgagtgc
     8401 ttgtgtggga aatacaaacg tttaaaacac cgtggcgtaa tttgtgaaaa atgtggtgtt
     8461 gaagtaaccc aaactaaagt acgtcgtgag cgtatggggc acattgaatt agcttgccct
     8521 gtcgcacaca tctggttctt aaaatcacta ccgtcccgta tcggtttaat cttagatatg
     8581 ccgttgcgtg atattgaacg tgtgctttat tttgaatctt atgtagttac tgaaccggga
     8641 atgaccgatt tagagaaaaa tcagttatta accgaagaac aatttatgga cgctgaagag
     8701 cgttggggtg atgaatttga agcgaaaatg ggtgcagaag gtatccaagc attacttcgt
     8761 gatttagatt tagaacacca atgcgaaacc ttgcgtgaag agttacaaga aaccaattca
     8821 gaaaccaagc gtaaaaaaat cactaagcgt ttaaaaacct tagaagcatt cttacaatcc
     8881 ggcaacaaac cggaatggat ggtgatgaca gtattaccgg tacttccacc ggatttacgt
     8941 ccgttagtac cgcttgacgg tggacgtttt gcgacttctg acttaaacga tttataccgc
     9001 cgtgtaatta accgtaacaa ccgtttaaaa cgcttgttag atttagttgc accggacatc
     9061 atcgtgcgta acgaaaaacg tatgttacaa gagtcggttg atgcgttatt agacaacggt
     9121 cgccgtggtc gtgcgattac cggttcgaac aaacgtccgt taaaatcttt ggcagatatg
     9181 atcaaaggta aacaaggtcg tttccgtcaa aacttattag gtaaacgtgt agattactca
     9241 ggtcgttcgg taattaccgt aggcccatac ttacgcttac accaatgtgg tttaccgaag
     9301 aaaatggcgt tggaattatt ccgtccgttt atctactcaa aattagaaaa ccgtggcatt
     9361 gcttcaacta ttaaagccgc gaagaaaatg gtagagcgtg aagatcctat cgtatgggat
     9421 attcttgccg aagtgattcg tgaacacccg attctactta accgtgcacc aacacttcac
     9481 cgtttaggta tccaagcgtt tgagccgtta ttgattgaag gtaaagcgat ccagttacac
     9541 ccactcgtgt gtgcggcgtt caatgcggac ttcgacggtg accaaatggc ggttcacgtt
     9601 ccattaaccc ttgaagcaca gttagaagct cgtgcgttaa tgatgtcaac caacaacgta
     9661 ctttcaccgg caagtggtga tccgattatc gtaccgtctc aggacgttgt actcggtctt
     9721 tactatatga cccgtgagaa agtaaacggt aaaggtgagg gaatgtactt ccttgaccct
     9781 cgtgaagcgg aaaaagcata ccgtaccggt caggctgaat tacattctcg tgttaaagtg
     9841 cgtgttactg aatatgagaa aaacgaagca ggcgaattag aagcaaaaac ttcgttagta
     9901 gataccacca ttggtcgttc aatcttatgg atgattgcac caaaaggtat gccgtttagc
     9961 ttgttcaacc aaaccttagg caaaaaagcg atctcgaaat taattaacga gagctatcgc
    10021 cgtttaggtt taaaagaatc tgtggtttta gctgaccaaa ttatgtacac cggctttgct
    10081 tatgctgctc gttctggtgc ctcagtaggt atcgacgata tggtaattcc ggagcaaaaa
    10141 tacgcaatca ttgaagcggc tgaagcggaa gtcgctgaga tccaagagca attcaacggc
    10201 ggtttagtaa cagccggtga gcgttataac aaagtgatcg atatttgggc tgctgcaaac
    10261 gaacgtgttg cgaaagcaat gatggaaaac ctttcaacgg aagaagtaat caaccgtgaa
    10321 ggtaatccgg aaaaacaagc ctcatttaac agtatcttta tgatggcgga ctccggtgct
    10381 cgtggttctg ctgcacagat tcgtcagtta gcgggtatgc gtggcttgat ggctcgtccg
    10441 gacggttcga ttatcgaaac cccaattact gcaaacttcc gtgaaggttt gaacgtatta
    10501 cagtacttta tttcaaccca cggtgcacgt aaaggtcttg ccgatacggc attaaaaaca
    10561 gcgaactccg gttacttaac ccgtcgttta gttgatgtgg cacaagattt agttatcatt
    10621 gaagatgact gtggtacgca cgaaggtatc gtgatgacac cacttatcga aggtggtgat
    10681 gtgaaagaag ccctgcgtga tcgtgtatta ggtcgtgtgg tggcagaaga tgtgttaaaa
    10741 ccgggtacag atgaagtatt aattccacgc aacaccttat tagatgaaaa atggtgtgat
    10801 gtggtggatc gtgaatctgt ggatgtgatc aaagtacgtt cggtagtaac ttgtgataca
    10861 gacttcggtg tgtgtgctaa atgttacgga cgtgacttgg ctcgtggtca cttaatcaac
    10921 caaggtgaag cggtcggtgt tattgcggca caatctatcg gtgagccggg tacacagtta
    10981 acgatgcgta cgttccatat cggtggtgcg gcttctgcgg cagcaaaaga atctagcatc
    11041 caagtgaaaa acgcaggtac gattaaatta accaacgcta aatttgtaac caacaaagaa
    11101 ggcaaaatcg tattaacttc tcgtaatact gaattaactg tcatcgacac cttcggtcgt
    11161 accaaagaaa actataaagt gccttatggt gcggtgcttt ctaaacacga cggtgcagaa
    11221 gtggctgtgg gtgaagtggt tgcgaactgg gatccgcaca caatgccggt aatctcagag
    11281 gtatcaggtc gtatccaatt tagcgacatc gtagatggct taaccgttac tcgccaaacc
    11341 gatgaattaa ccggtttatc atctatcgtg gtgcaagatg tgggtgaacg tgcaaccgca
    11401 ggtaaagatt tacgtccggc attacgctta gttgatagca acggcaaaga catcttaatt
    11461 ccgggtacag acgttgcagc acaatacttc ttaccgggta aagcaatcgt aaccttagac
    11521 gatggtgcag aaattgaagt cggtgaagcc ttagcccgta ttccacaaga atctgtgggg
    11581 acgaaagata ttaccggtgg tcttccacgc gtagcagact tattcgaagc ccgtaaaccg
    11641 aaagagccgg caatcttggc ggaaatttca ggtattgtgt cgttcggtaa agaaaccaaa
    11701 ggtaaacgcc gcttggtaat tactccggcg gaaggcgaag cgtttgaaga gatgattcca
    11761 aaatggcgtc agctcaacgt atttgaaggc gagatggtac aacgtggtga tgtgatatca
    11821 gacggtgcag aaactccgca cgacatctta cgcttacgtg gcgttcacgc cgttaccgac
    11881 tacatcgtaa acgaagtgca agaagtttac cgcttacaag gggtaaaaat taacgacaag
    11941 cacatcgaag tgattgttcg ccaaatgttg cgtaaagctg tgatcaccaa cgcttacgac
    12001 tctgaattct tagagggcga acaagtggaa gtggctcgtg tgaaaattgc caaccgcaaa
    12061 cgtgctgaag aaggcaaacc gttggtagaa tttgaacgtg aattgcttgg tattaccaaa
    12121 gcatctcttg caacagaaag ctttatttct gcagcctcgt tccaagaaac cactcgagtg
    12181 cttaccgaag ccgcagtggc aggtaaacaa gatgaattgc gtggcttaaa agagaacgta
    12241 atcgttggtc gcttaatccc ggcaggtacc ggttttgctt accaccaagc acgagctaaa
    12301 aaacgtgccc aactggaagc aggaattgca gttgtccctg aatttgaagc accggcagct
    12361 aaagccaatt cattcgttac cgatgcagac atcgaagctg aatttgaatt tgttgcagac
    12421 gatgcaaccc aaagtttagc agcgttgtta aatgcgggtg aggaagagta atagctcgta
    12481 gggtatgata aa
//
LOCUS       DANLZQ010000084        12406 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.084, whole genome shotgun sequence.
ACCESSION   DANLZQ010000084 DANLZQ010000000
VERSION     DANLZQ010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 12406)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12406)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12406
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.084"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            144..803
                     /locus_tag="PXE50_001936"
     CDS             144..803
                     /locus_tag="PXE50_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDL5622816.1"
                     /translation="MFNISKQQVLDAFHFRSACRSYDPNKKINKEDMDYILELGRLSP
                     SSVGSEPWKFLVLQNPETRQKIAPVSWGIKHPMEEMSHLVVILTKKNVRYDSVYMRDM
                     LAKRGLTYEQIEASLVRYKSFQEEDMKLLSERELFDWSTKQTYIALGNMMTGAALIGI
                     DSCPIEGFHYDTVNQILSDEGLFDLNEYGVSCMITFGYRNKEIKKKSRKPTEEVIAWI
                     E"
     gene            complement(863..2188)
                     /locus_tag="PXE50_001937"
     CDS             complement(863..2188)
                     /locus_tag="PXE50_001937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-cystine transporter"
                     /protein_id="HDL5622817.1"
                     /translation="MLIFNLIVFAAILFLLAKIYKSTQKLGQTVFIGLFLGLASGAFL
                     QTFYEKATVDATLDWINLIGNGYVRLLQMIVMPLVFVSILSAITRLKEAGSLGKISFS
                     VLSVLLVTTAIAAAIGIALVYLFDLSAEGLVAGSRELAAQEKVVGRVEQVSNLSVPSM
                     LLSFIPKNPFLELTGANPTSIINTVIFSALLGIAALSLGKEDKALGERIAQGVETLNK
                     LVMRLVRFVIRLTPYGVFALMIKMAATSQWSDIVNLGSFIVASYIAIGLMFIVHGILL
                     FVAKINPLDYYKKVLPTLSFAFTSRSSAATIPLNIETQTNKLGNNSVIANFSATFGAT
                     IGQNGCAGIYPAMLAVMVAPTVGMDPFSLNYILTLILVVAISSFGIAGVGGGATFAAI
                     VVLSTLNLPIELVGLLISVEPIIDMARTALNVNGAMVAGTLTNKWVKAE"
     gene            complement(2289..3041)
                     /locus_tag="PXE50_001938"
     CDS             complement(2289..3041)
                     /locus_tag="PXE50_001938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-ribbon-containing protein"
                     /protein_id="HDL5622818.1"
                     /translation="MYQAIVHFSYHNFEQDPVTAISQILNQWLYNGQVIGREMPITFH
                     QNEFQARVCVPTQESLLPQYNSDEVNEALQQAVEIGVIFASFELVGRDYQGEESSHNR
                     SPAFQILYTTHLDTCSPLYDGEQFAPIPLYSLQDQSLSEAILEWQQNWQACDLLQMNG
                     NLLECHALVQISDETSDLAMIGRDLCQQIEQKTHIPTFYYLYRLGRDESEYQRKCPCC
                     GGEWKLTEPLHDIFHFRCEPCRLISNLSWELL"
     gene            complement(3041..3946)
                     /locus_tag="PXE50_001939"
     CDS             complement(3041..3946)
                     /locus_tag="PXE50_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HDL5622819.1"
                     /translation="MNEKYSKLVKNAANLAIIVAILLIVIKAFAWWKTGSISILAAMT
                     DSVVDLFASLTNILVLRFALQPADENHAFGHGKAESLAALAQSAFISGSAVFLLLQGF
                     HKLTNPELIAQSSIGVIVSIVSIVITALLVFYQRYVVTLTKSPAIEADSLHYQTDLLM
                     NAAILVAMLLNSAGFVYADAVFAIGIALYIAFNAVKMFWCAVQTLLDQALPDEEIERI
                     KEIASQHPNILGIHDILTRRAGAVRFIQLHLELDDHLTLLVAHEITDSLEQKLLAAFP
                     MSHVIIHQEPTTVVKQEFQDMAENI"
     gene            complement(3955..4518)
                     /locus_tag="PXE50_001940"
     CDS             complement(3955..4518)
                     /locus_tag="PXE50_001940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATPase"
                     /protein_id="HDL5622820.1"
                     /translation="MSAIKKGITLVALSLAGCVSQSPQFAVPDAIHFGQDTFVKVTHS
                     QIDEMQHLLYLPEKSEKNPENWQKGILFFLDKNSKNQTLEQRAAFRQASFAKKPELEA
                     KVEIQQNELHSSVIYPPIERFNNVMLEVTRGRNLACGYGQIQFADKREVGKTVAKKSP
                     NLTAYSQEIARLSLELNQLGWQVQCSK"
     gene            complement(4518..5294)
                     /gene="yaaA"
                     /locus_tag="PXE50_001941"
     CDS             complement(4518..5294)
                     /gene="yaaA"
                     /locus_tag="PXE50_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HDL5622821.1"
                     /translation="MLAIISPAKTLDFKTNIDGFAFSQPNLTACSQELIDICKQLSPA
                     ELGSLMSISDKLAALNVARFAEWQLEHNEQNAKAALFAFKGDVYTGLEAETLSKAQVE
                     YAQQHLRMLSGLYGLLKPLDLMQPYRLEMGTKLANPKGKDLYAFWGNIITENLQQAID
                     EQGDDILVNLASDEYYGAVKPQNLNATIIKPVFLDEKNGKYKVISFYAKKARGMMVRF
                     ILDTQPTSIEQLKQFNYGGYWFDADSSSESELVFKREEQA"
     gene            complement(5483..7203)
                     /gene="ltrA"
                     /locus_tag="PXE50_001942"
                     /pseudo
     CDS             complement(5483..7203)
                     /gene="ltrA"
                     /locus_tag="PXE50_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012341372.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
     gene            complement(8885..9280)
                     /gene="rpsI"
                     /locus_tag="PXE50_001943"
     CDS             complement(8885..9280)
                     /gene="rpsI"
                     /locus_tag="PXE50_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015432457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HDL5622822.1"
                     /translation="MTAANQNYGTGRRKSSSARVFIKPGSGNITINQRSLEVYFGRET
                     ARMIVRQPLELVELTDKLDLYITVKGGGISGQAGAIRHGITRALMEYDETLRPALRAA
                     GFVTRDARRVERKKVGLHKARRRPQYSKR"
     gene            complement(9297..9725)
                     /gene="rplM"
                     /locus_tag="PXE50_001944"
     CDS             complement(9297..9725)
                     /gene="rplM"
                     /locus_tag="PXE50_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010847760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HDL5622823.1"
                     /translation="MKTFVAKPETVQRDWYVVDATGKTLGRLATELARRLRGKHKPEY
                     TPHVDTGDYIIVINADKVAVTGKKQTDKIYYWHTGYVGGIKDATFKEMIARRPEAVIE
                     IAVKGMLPKGPLGREMFRKLKVYAGSEHNHQAQQPQVLDI"
     gene            10024..10419
                     /locus_tag="PXE50_001945"
     CDS             10024..10419
                     /locus_tag="PXE50_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhcB family protein"
                     /protein_id="HDL5622824.1"
                     /translation="MEQWTTDVWAAIMAAFIVGAVIGCTLVRVFNSSVRKQHELEKEL
                     KQTKTQVDEQKQKLEQHFEQSAQLLSSLASDYKKLYTHLAQSSEKLLPEASKNITFFQ
                     QTKLPIPAEKTEEDQPRDYSEGSSGLLKS"
     gene            complement(10580..12151)
                     /gene="guaA"
                     /locus_tag="PXE50_001946"
     CDS             complement(10580..12151)
                     /gene="guaA"
                     /locus_tag="PXE50_001946"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HDL5622825.1"
                     /translation="MTNIHHHKILILDFGSQYTQLIARRVREIGVYCELWAWDVTEEQ
                     IREFNPTGIILSGGPESTTEENSPRAPEYVFNAGLPVLGICYGMQTMAMQLGGLTETS
                     DHREFGYASVALKSADQLFANLNDDLTACEPKLDVWMSHGDKVTKLPPHFTITGVTPT
                     CPIAAMSDESRRFYGVQFHPEVTHTKQGLALLKNFVVGICGCETNWTAENIIEDAVKR
                     IREQVGDDEVILGLSGGVDSSVTALLLHRAIGKNLHCVFVDNGLLRLNEGDQVMEMFG
                     NKFGLNIVRVNAEDRFLEALKGLDEPEAKRKTIGKVFVDVFDDESKKLSSVKWLAQGT
                     IYPDVIESAASKTGKAHVIKSHHNVGGLPDYMKLGLVEPLRELFKDEVRKIGLALGLP
                     AEMLNRHPFPGPGLGVRVLGEIKKEYCDLLRKADAIFIEELHKAGWYYKVSQAFTVFL
                     PVKSVGVMGDGRKYDWVVSLRAVETIDFMTAHWAHLPYDLLGKISNRIINEVNGISRV
                     VYDVSGKPPATIEWE"
     gene            complement(12168..>12406)
                     /locus_tag="PXE50_001947"
     CDS             complement(12168..>12406)
                     /locus_tag="PXE50_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622826.1"
                     /translation="TTASPLLKLDTERNINLYFQAIHKCTPDKIHTKIINIPSEGNAK
                     ELWTATGCNKTQSFIITYRNDGVGGTFINMTTTP"
BASE COUNT         3531 a         2776 c         2348 g         3751 t
ORIGIN      
        1 atgattgatt tttaaggtaa agcaatttta aacaagcggt cattttttcc taattttttg
       61 caaattaaca ggcgtgaaat tcgcattctg ctctaaatca agttatcatt aatctactta
      121 tttcacttat aaaaggaaaa acgatgttta atattagcaa acagcaagtt ttagacgctt
      181 ttcacttccg ttcggcctgt cgcagttacg atccaaacaa aaaaatcaac aaagaagata
      241 tggattatat tttggaactc gggcgtctct caccaagctc tgtcggttct gaaccgtgga
      301 aatttttagt gctacaaaac ccggaaaccc gtcagaaaat cgccccggtt tcgtggggaa
      361 ttaaacaccc aatggaagaa atgagccatt tagtggtgat tttaaccaaa aagaatgtcc
      421 gttatgattc tgtctatatg cgtgatatgt tagccaaacg aggcttaacc tatgagcaga
      481 ttgaagcctc gctggtacgc tataagtcgt tccaagaaga ggatatgaaa ttgcttagtg
      541 aacgtgaatt attcgattgg agtaccaagc aaacctatat tgcattaggc aatatgatga
      601 ccggtgcggc tctgattggt attgactctt gcccgattga aggttttcat tacgataccg
      661 taaaccaaat tttatcggac gaaggcttat ttgacctaaa cgaatatggt gtgtcttgta
      721 tgataacttt tggctatcgc aacaaagaaa ttaagaaaaa atcccgcaaa cctaccgaag
      781 aagtgattgc gtggattgaa taatcacctt aacttataaa aacgggcgaa ttaatcgccc
      841 atttttatat ctttagtttt gactactcgg ctttcaccca tttattggtt aatgtgcccg
      901 ccaccattgc accattcacg tttaaggcgg tgcgagccat atcaataatc ggctcaactg
      961 aaatgagcaa gcctactaac tcaatcggca gattcaaggt tgatagcacc acaatcgccg
     1021 caaaagttgc accaccacct acaccggcaa tgccaaatga ggaaattgcc accaccaaaa
     1081 tcaaggttaa aatatagttt aagctaaacg gatccattcc cactgttgga gcgaccatca
     1141 ccgccaacat tgccggataa attcccgcac agccattttg cccgatggtt gccccaaagg
     1201 ttgcagaaaa gttggcaatc acactgttat tacctaattt attggtttgc gtctcaatat
     1261 tcaacggaat ggttgccgca ctggaacgag acgtaaaagc aaaacttaat gtcggcaaca
     1321 cttttttgta gtaatccaac gggttgattt tagccacaaa gagtaaaata ccgtgcacaa
     1381 taaacatcaa accaatcgca atgtatgatg ccacaataaa gctacctaaa tttacaatat
     1441 cgctccattg agaagttgcc gccattttga tcatcaacgc aaatacgcca taaggggtta
     1501 ggcgaatcac aaaacgtact aaacgcataa ccagtttatt taaggtctct acaccttgtg
     1561 cgatacgttc gcccaacgct ttatcttctt tgcctaagct cagtgcagca atgcctagca
     1621 gagccgagaa aataaccgtg ttgatgatcg acgttgggtt tgcaccggtt aattctaaaa
     1681 acggattttt cggaatgaaa gaaagcaaca ttgaaggcac agataagttg ctcacctgct
     1741 ccacacgccc taccactttc tcttgagcgg caagctcacg ggagccggcg actaaaccct
     1801 cggcagataa atcaaacaga tacactaaag caataccaat cgctgcggca atcgcggtgg
     1861 tcactaataa cactgatagc acactaaaac taattttgcc taaagatcct gcctctttta
     1921 agcgggtaat tgccgataaa atagagacaa acaccaatgg cattacgatc atttgtagca
     1981 agcgaacata accgttacca attaagttaa tccaatcaag agttgcatca acagtagctt
     2041 tttcgtaaaa agtttgcaaa aaagcaccgc ttgcaagccc taaaaataac ccaataaaca
     2101 ctgtttgacc gagtttttgc gtagatttat aaattttagc caataaaaat aatattgccg
     2161 caaagacaat taagttgaaa ataagcacag aacctccaaa gtaaaaccgc ttattataaa
     2221 aatgccgcaa gggtattacg cttgcggcat tcattcaaga tgatttatta ctttggtata
     2281 actaaaagtt ataataattc ccagcttaga ttagagatca aacggcaagg ctcacatcta
     2341 aaatggaaaa tatcgtgcaa cggctcagtt aatttccatt ctccgccaca acaagggcat
     2401 ttgcgttgat attcactttc atcacgccct aaacggtaga ggtaataaaa ggtgggaatg
     2461 tgagttttct gctcaatttg ctgacataga tctcgaccga tcattgcaag atcgcttgtt
     2521 tcatcactaa tttgaacaag tgcgtggcac tccagcagat tgccgttcat ttgtagcaga
     2581 tcgcacgctt gccaattttg ctgccattcc aatatcgctt cgctaagaga ctgatcctgt
     2641 aaagaataaa gcggaattgg ggcaaactgc tctccatcat aaagtggcga gcaggtatct
     2701 aaatgggtgg tatataatat ttgaaacgct ggcgagcggt tatgactgct ttcttcgccc
     2761 tgataatctc gcccgacaag ctcaaaactt gcaaaaatta cgccgatttc gaccgcttgt
     2821 tgcaacgctt catttacttc atcactatta tattgtggca aaaggctttc ttgtgtaggc
     2881 acacaaaccc gagcttgaaa ctcgttttga tgaaaagtaa tcggcatttc tctgccaatg
     2941 acttgcccgt tatataacca ttgatttaag atttggctaa ttgccgtcac cggatcttgc
     3001 tcaaaattat gatagctgaa atgcactatc gcctgataca ttaaatattc tccgccatat
     3061 cttgaaattc ttgtttgacc accgtagtcg gctcttgatg aataatcacg tgagacatcg
     3121 gaaatgccgc cagcaatttc tgctcaaggc tatcagttat ttcgtgagct actagcagcg
     3181 ttaagtgatc gtctaattcc aaatgtaatt ggataaaacg cactgcacct gcacggcggg
     3241 ttagaatatc gtgaatccct aaaatgttcg gatgttgcga agcaatctct ttaatccgct
     3301 caatttcttc atcgggcaaa gcttggtcta gcaaggtttg caccgcacac caaaacattt
     3361 ttactgcatt gaaagcaatg tagagggcaa tacctattgc aaaaactgca tcggcgtaca
     3421 caaaaccggc actattaagc aacattgcca ctaaaattgc cgcattcatt aataaatcag
     3481 tttggtaatg taacgaatcc gcttcaatcg ccggactttt cgtaagcgtg acaacataac
     3541 gctgataaaa gactaaaagt gcagtaatca caattgatac aatactgaca attaccccaa
     3601 tactcgattg agcaattaat tccggattgg tgagtttatg gaaaccttgt agcagtagga
     3661 aaaccgccga gccggaaata aacgcacttt gggcaagtgc cgccaaagac tccgctttgc
     3721 cgtgcccaaa cgcgtgattc tcatctgccg gttgtagtgc aaaacgcagc actaaaatat
     3781 tggttagcga agcaaacaga tccactaccg aatccgtcat tgctgccaag attgaaatcg
     3841 aaccggtttt ccaccatgca aaggctttaa tcacaatcag taagatcgca acaataatcg
     3901 ctaaattcgc tgcatttttg actaatttgc tgtatttttc gttcatttac tacattattt
     3961 actgcattgg acttgccaac ccagttggtt taattcaaga gaaagtctag caatttcttg
     4021 gctgtaagcg gtcaaattcg gcgatttttt tgcaactgtc ttgccaactt cccgcttatc
     4081 tgcaaattga atctgcccgt aaccacaagc taaattccgc ccacgggtta cttctaacat
     4141 cacattgtta aaacgttcta taggtggata aatcacactg ctgtgtaatt cattttgctg
     4201 aatttccact ttcgcctcaa gctccggctt tttcgcaaaa cttgcttggc ggaatgcagc
     4261 tcgttgctct aaggtttgat ttttactgtt tttatctaag aaaaataaaa tgcctttttg
     4321 ccaattttcc ggatttttct cactcttttc tggcaaataa agtaaatgtt gcatttcatc
     4381 aatttggctg tgggtgactt ttacaaaagt atcctgccca aagtgaatag catcaggcac
     4441 tgcaaattgt gggctttggc tgacacaacc tgccaatgat aacgcaacca aagttattcc
     4501 ctttttgata gccgacatta tgcctgctcc tcacgtttaa agactagctc gctttcacta
     4561 gaactgtctg catcaaacca atagcccccg tagttaaact gtttgagctg ttcgatgcta
     4621 gtcggttggg tgtctaatat aaagcgaacc atcattccac gggctttttt ggcatagaag
     4681 ctgatcactt tatatttacc gtttttctca tctaaaaaca ccggcttgat aatagtcgca
     4741 tttagatttt gtggcttaac cgcaccataa tattcatcag aggcaagatt aactaaaata
     4801 tcatcgcctt gttcatcaat cgcttgctgc aaattttcag taataatatt gccccagaaa
     4861 gcataaagat ctttgccttt cggattggct aacttagtgc ccatttctaa acgataaggc
     4921 tgcattaaat ctaacggctt taataaacca tacaagcctg aaagcatacg caaatgttgt
     4981 tgagcatatt caacttgtgc tttgcttaac gtttctgcct ctagtccggt ataaacatca
     5041 cctttaaagg caaagagggc ggctttggca ttttgttcgt tatgctcaag ctgccactcg
     5101 gcaaagcgag ccacatttaa agcggctaat ttatcgctaa ttgacatcaa actacctaat
     5161 tcagcaggtg aaagctgttt acaaatatca attaattctt ggctacaagc ggtcaaattt
     5221 ggttgagaaa atgcaaaacc gtcaatattg gttttaaaat caagggtttt ggcaggggaa
     5281 ataatggcta acataaatgc ctctatcaaa tagttaatca gggcggttat tctaccacag
     5341 tcataaagac aaaaaaggca ggaaaccctg ccttcttgaa aacgaaaaga aaagtcgggt
     5401 agcgaaagta cattactgca cctccgcccc ctaagaactg tacaagcaaa tttctctgca
     5461 tacagctcaa gcctttcatc agctatatag ccggcttcac gacctccaag ttcaaagtat
     5521 gaatctttat gtgacaagtc ggatgtacca aacaacgatt gcttaatgca tcgcttcctc
     5581 ctaacatttt gtacacgata tgatgatcgt gccagcctgt ttctttggtt attggcaacc
     5641 cacataatgc acattttcca cgctggtctt tatacagtgc ctgccattgt cgtctgtgtg
     5701 attgttcttc atacagacgt tcttggctca gtttttcgcc gtacaactcc cattcaggca
     5761 aaaacggatt atattcagac ttaattttaa cgtgtcgttt gattttaaca tagccacaat
     5821 agaataagtc tatcggctta gtttctcctt tttcattggt ataaactgtg ccaaataccc
     5881 aatttcgagt cgctgtggta caaaagtatt tctcttttat ccacataata cctttattgt
     5941 gatgacggcg ttcacaccat ttccaaagta ctttccaaac taatgcgtcc attcgtccga
     6001 atgccttact tgcaacttgg cttcgatgat aatttgccca acctcgtaac attgggttta
     6061 gcaccattat aagatcttcc tgtttagcca ttttcattta gaaattacct cttttacctt
     6121 gttgtagaac gctttcacat tcttttgact tggtctgttc agtatttttc ctttgaaacg
     6181 tctcacattc caacctagaa aatcaaaacc ttcttcaata tgtaccactt tcgtcttttc
     6241 tgttgataag gataaacctc gttcattcag aaagttctgg ataagtggga taacttgatt
     6301 ttcaagtaac tctttcgttt tacctgatat gataaagtca tctgcataac gtactaagta
     6361 agttttattt tctcgaattg tccgactgcc ttttcctcca aaatgagttt ctaacagttt
     6421 ttccaatcca tctaatgcca tatttgcaag cgttggcgag ataatcccac cctgtggtgt
     6481 accttcctct gttcgtttca accgtccaaa ttccactaca cctgatttta gccatttccg
     6541 caatatccgt ttattcattg gaatatgctt taatagccag tcgtggctta tgtggtcaaa
     6601 acaacctgca atatccgcat caagtaccca ctcaacaggt tgattagttt tcttgccttt
     6661 atgcgaataa atttagtgta tatgagtaat agcatctacc gttgaacggt ttaatctaaa
     6721 tccataagaa cctttatccg cagttgtttc tgccacaggt tgtattgcca ataaataaag
     6781 ggcttgcatt gctctatctc gcattgttgg aatacccaac ggacgtttct ttccattcgg
     6841 tttggggata tacactcgtc ttaatggact aggtttatac cctttttccg tcaatgatag
     6901 tgcggcttgc cattttgtct ctggggtctc ccaaagctct ttatcgacac cacttgttcg
     6961 cttaccttga ttttcagtca ctcttcttac tgcaactaat ttagcataat gtgagtgggt
     7021 tagcattcgt tgtaagtttt taaccttacg ccaattgcct tccagtgttg ccttcgcaat
     7081 ccgaatttgc attcctttca catacgtttc agctttatgc caatcgacat aatgccattt
     7141 ggagatgtgc gaggtcgctg gattgcaagc taacttttca gtataatgct tacgctcttt
     7201 catacctacc tctgatatta caagataagt cgaaagtctc agcaagtggg tagatccttc
     7261 aagtaaacaa atccctattg agataaacta tccttagttt attccctttg gttacaagag
     7321 gatcttaccg ttttaccgat aatttcaacc gctcttgtaa ccgattgggt taaagagtcg
     7381 agcgctaggt tatgatgagc ctaacgctca tttctttaat ttgtttttgt acctattcaa
     7441 cattgtattc cttgataaca ttcaatttct cttctgttat ctacaatctc tttcggtgtt
     7501 acccttaaag gaaacgctat tcatcttacg atgaaagacc agttagaagt ctgcaccctt
     7561 tcgggttagg ctatgtttca caccctatct atgccattac agcatagcat tcgctttttc
     7621 taacctccct tacctgcatt cccaacagta tcgcttacgc tttacttgcc ttttcctctt
     7681 ttaccttcgc catctatttc aaacggtttg agtattgtgg gcaaggcaga aatacaggct
     7741 taccaagttc cattactatc acacgagtag tgaagataca gtctctcccc cgacagtgct
     7801 ttgatggcgt atcctcacgt taaagaagaa taaccgactg cctacctttt ggtcagagcc
     7861 tatcaatagc tttggctctc tctcgataac gaggtttatc aactgttcac ttacgtttat
     7921 ctttctaccc agtctagccc cttgaaggtg tgctattcac tttctcccaa tgtcctctca
     7981 cgatttcatt gactgatttt catcaggggt tcattgtcag gaagctccgc accacaccgt
     8041 taccggtgtc gcactatccc tagactactg ttagccatat aacaggttac cttatcattc
     8101 cctccgtact actcatatct tcggattgtt tgaccgtaac aatgacagta atagcttacg
     8161 catacttact aagtcagtat cctatactgc ataaataagt ccgaaccttt acaaaataaa
     8221 ttcacttatg cgactaaagt cgctttgtct atatccaaat tttcccgcaa atagcctata
     8281 acctgtccaa taggcgaagg tagctaaccc tagctaatgt gagtattaga ggtgatttta
     8341 acgagaattt aaggtataat tatccctagc tcataaaaac gaataaacaa gagtttatcc
     8401 ttagtgtttt tattcactat tgaggagcat tctacgatta ccgtagattg cgagtgtgaa
     8461 aagtataagt aaagatggca ctccttccct aagatttacc aagtcttagt tctgatgtct
     8521 tttctgagtg ctgaggcgat ctattggact ttatttatag taggtgttgt aaattttctc
     8581 tgctctgggg tatgggtaac tccggtctgc ggatcttgct ttcttactct atcttggtat
     8641 taagaaaaaa accaagtaca tcaaagtgaa gatcatacct tacagccttt cgagttggtt
     8701 catttacttt cccaacttag aacaagagtg cttgggcaaa gccccttttc tcttgcctgt
     8761 ctttccaagc actccgaaga gtgcttggaa agtcggaagc aggtgataag aataccaccc
     8821 acttccagca ataactcctt gatatataag gagttattgc cataagtacg acaacttgtc
     8881 gcacttaacg ttttgagtat tgtggacgac gacgtgcttt gtgtaaaccc acttttttac
     8941 gttcaacgcg acgtgcgtca cgagtaacga agcctgctgc acgaagtgct gggcgtagcg
     9001 tttcatcgta ttccattaat gcacgagtga taccgtgacg gattgcaccc gcttgaccag
     9061 aaataccacc acctttaaca gtgatgtaaa ggtctaattt atcagttaat tcaaccaatt
     9121 ctaacggctg acgtacgatc atacgagctg tttcacgacc gaagtaaact tcaagtgaac
     9181 gttggttgat agtaatgtta cctgaacccg gtttgataaa tacacgggct gaagagcttt
     9241 tgcggcgacc tgtgccgtag ttttgatttg ctgctgtcat ttttatgctc cgtgaattag
     9301 atatctaaaa cttgtggttg ttgtgcttgg tgattgtgtt ctgaacctgc gtaaactttt
     9361 aatttacgga acatttcacg accaagtgga ccttttggta acataccttt cactgcgatt
     9421 tcaatcacag cttcaggacg acgagcaatc atttctttga aggttgcatc tttgatgcca
     9481 cctacatagc cagtgtgcca gtagtagatt ttgtcagttt gttttttacc tgttactgct
     9541 actttgtctg cattgatcac gatgatgtaa tcaccggtat caacgtgtgg agtgtactca
     9601 ggtttatgtt taccacgaag acggcgtgcc aattcagtcg ctaaacgacc taatgtttta
     9661 cccgtcgcat ctactacata ccagtcacgt tgtactgttt ctggttttgc tacaaaagtt
     9721 ttcattaatt aaataccaaa tttaaagttt aaaacccaat acctcattga ggtatttcct
     9781 attattttac ggtgaacccg accccttcga gtctgattca gaccaaactt gtgtggcggg
     9841 gaaaaccaca caaaaacagg gtggcgaaat tatacagaga tttcactcaa aaatctaaca
     9901 ttttttgctg ataatctttc aaaattgaac ctatatcaca ttttaatcat ttggagcttt
     9961 tcaaataaaa actgaaatgt taaaaatagc agtaatcaat cactaaaaca taaggagttt
    10021 atgatggaac aatggacaac agatgtttgg gcagccatta tggcagcatt tattgtaggt
    10081 gctgtaatag gttgcactct agttagagta tttaacagta gtgtcagaaa acagcatgaa
    10141 ctggaaaaag agttgaagca aaccaaaact caagtggatg agcaaaaaca aaaacttgaa
    10201 caacactttg agcaatcagc ccaattactt tcaagtctag cttctgatta taaaaagctt
    10261 tatacccatt tagcacaaag ctctgaaaag ctattaccag aagcatcaaa aaatattacc
    10321 tttttccaac aaaccaaatt acctattccg gcagaaaaaa cggaagaaga tcaacctaga
    10381 gattattccg aaggttcatc tggcttactg aaatcataaa actaaaaatt gaatatttag
    10441 ttttactaaa aggcacttag tttaaggatt gattccgttg gaatcaatcc tttattctaa
    10501 accgctacat taagcagtta acaacatttt tcagctttag atactgaact taggttataa
    10561 gaagcctatt ttgtaagagt tattcccact caatggttgc cggtggtttt ccgctcacgt
    10621 catacaccac acgggaaata ccgttcactt cgttaataat gcggttggag attttgccta
    10681 atagatcata cggcaagtgc gcccagtgag cggtcataaa gtcgatggtt tccaccgcac
    10741 gcaggctgac gacccagtca tatttgcgtc catcgcccat tacgcccacc gatttcaccg
    10801 gcaagaatac cgtgaaagct tggctgactt tgtagtacca gccggctttg tgcagttctt
    10861 cgatgaagat cgcatcggct ttacgcagta aatcgcagta ctcttttttg atttcgccca
    10921 gcacacgcac gcctaagccc gggccgggga acgggtggcg gttgagcatt tcagctggta
    10981 agccgagtgc caagccgatt ttgcgcactt cgtctttaaa caattcacgc aacggttcga
    11041 ctaagccgag cttcatataa tccggcaagc cgccaacgtt atggtgtgat ttaatcacgt
    11101 gggctttgcc ggttttgctg gcggcggatt caatcacatc agggtagatc gtgccttgtg
    11161 caagccattt gaccgagcta agttttttgc tttcgtcatc aaacacgtcc acaaacactt
    11221 taccaatggt tttgcgttta gcttccggtt cgtctaagcc ttttaacgct tctaagaaac
    11281 ggtcttcggc attcactcgc acaatgttca aaccgaattt gttgccgaac atttccatga
    11341 cttgatcgcc ttcgttcaag cggagcaagc cgttatccac aaatacgcag tgcaggtttt
    11401 taccgatagc acgatgtaat agcaaggcgg tgacggagga atccaccccg cccgacaaac
    11461 ctaaaatcac ctcgtcatcg cccacttgct cacgaatgcg tttcaccgca tcttcaatga
    11521 tgttttctgc cgtccagttc gtttcacagc cgcaaatgcc gaccacgaag tttttcagca
    11581 acgccaagcc ttgtttggtg tgggtcactt cggggtggaa ctgcacgcca tagaaacggc
    11641 ggctttcgtc cgacatcgcg gcaatcgggc aggttggggt aacgcctgtg atggtaaagt
    11701 gcggtggtaa tttggtgact ttgtcgccgt gactcatcca cacgtccaat tttggctcgc
    11761 aagcggtcaa atcatcgttt aaatttgcaa aaagttgatc ggcagatttg agagccaccg
    11821 aggcatagcc aaattcacgg tggtcggacg tttcggttaa accgcccaac tgcatcgcca
    11881 ttgtctgcat tccgtagcaa atgcccagca ctggcagacc agcgttaaac acatactccg
    11941 gcgctcgtgg gctgttttcc tcagtggtgc tttcaggacc tcctgaaaga ataatccccg
    12001 ttgggttaaa ttcacggatc tgctcttccg ttacgtccca agcccaaagc tcgcagtaaa
    12061 ccccaatctc ccgcacacgg cgtgcgataa gctgagtata ttgtgaaccg aagtctaaaa
    12121 ttaaaatttt gtggtggtgg atgtttgtca ttgtaatttc ctttaaatta tggcgttgtg
    12181 gtcatgttaa taaaagtgcc gcctacccca tcgtttctat atgtaataat aaaagattgc
    12241 gttttattac aacctgttgc agtccaaagt tcttttgcat taccttcact tggaatattg
    12301 atgatttttg tatgaatttt atcaggagta catttatgta ttgcttgaaa atacagattt
    12361 atatttcttt ctgtgtccaa ctttaataaa ggactggccg ttgttt
//
LOCUS       DANLZQ010000085        11734 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.085, whole genome shotgun sequence.
ACCESSION   DANLZQ010000085 DANLZQ010000000
VERSION     DANLZQ010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11734)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11734)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11734
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.085"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(6..82)
                     /locus_tag="PXE50_001948"
     tRNA            complement(6..82)
                     /locus_tag="PXE50_001948"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(46..48),aa:Pro,seq:tgg)
     gene            complement(107..182)
                     /locus_tag="PXE50_001949"
     tRNA            complement(107..182)
                     /locus_tag="PXE50_001949"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(147..149),aa:His,seq:gtg)
     gene            complement(212..288)
                     /locus_tag="PXE50_001950"
     tRNA            complement(212..288)
                     /locus_tag="PXE50_001950"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(252..254),aa:Arg,seq:ccg)
     gene            complement(447..1169)
                     /gene="rffM"
                     /locus_tag="PXE50_001951"
     CDS             complement(447..1169)
                     /gene="rffM"
                     /locus_tag="PXE50_001951"
                     /EC_number="2.4.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide
                     N-acetylmannosaminouronosyltransferase"
                     /protein_id="HDL5622827.1"
                     /translation="MFDKVIIRGIALQAVKNREIFANWLMNEKRIQFGRLVAINAEKV
                     ILSEKNPLLRRVIDEAEFNYADGISVVQSIRKKYPNYKIERIAGADLWETLMQRAGAL
                     NVPVFLVGSSADTLTKVEAKLAQWKVNIVGRQNGYFKAEQEQDVIEQIKASGAKFISV
                     AMGTPKQELFIQQLQQQYPQALYMGVGGTYDVFAGKVKRAPKIWQNLGLEWLYRLLKQ
                     PTRWQRQLNLLKYAYYYLTNQL"
     gene            complement(1159..2430)
                     /locus_tag="PXE50_001952"
     CDS             complement(1159..2430)
                     /locus_tag="PXE50_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WzyE family oligosaccharide polymerase"
                     /protein_id="HDL5622828.1"
                     /translation="MNNLIPLGGFYLVSVGLFFSLLYQLYQKSGISFHLLFSLLYFVT
                     FYAGFPFSLIMAFGFDYPLPELKTQWQVFTAAGVGYLIYYVVYSRLWSAVSQPTALVA
                     NFQAKTTACILAAVAVVALLYFLYLNGFLLFKLEKYSQLFAKDRVILSALKRFFYFLL
                     PALLIFCFLYKNKTAWWALLIVGGAFGILSYVAVGGTWANLALAVGFFLLIGLQQGYL
                     SLSKVIAVSLIGVVAMFFLALARYKLTLSGSEMIYTFLYLSRDTFSPWENLARVFSNE
                     VEYQGLMPIVRDFYVYIPQSLWQERPEIVWNTANYFTKVILGNQSGLAISPTLLGSFY
                     IMGGFSVMALGMGIVAAMIKALDNLFAYAKACNSALLQAYCFGNLFNLIVLVREGIDA
                     FVSRFCFFTLIFMACYLLAKILSMGKNNNVR"
     gene            complement(2423..3493)
                     /locus_tag="PXE50_001953"
     CDS             complement(2423..3493)
                     /locus_tag="PXE50_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TDP-N-acetylfucosamine:lipid II
                     N-acetylfucosaminyltransferase"
                     /protein_id="HDL5622829.1"
                     /translation="MLPIYHILGSEIEHHNQQVLTFFQQELLPLLPDSEHFFYVVGKP
                     SLQTAFPHLRIKQFSSQKAIANALIAKKRQNPTACFLLHGQFNPWIWLAIALGRLPTT
                     NLIWHIWGADLYEMATSWKFKLFYPFRRVAQQKILQVWATRGDLDHLWRNMRTRSEQD
                     HLIYFPTKLGDQIKISPTQNDRLTILLGNSGDPANELIQALSEIHQRLGNNVRIIIPM
                     GYPENNESYIRQVEAYSKRLFLAENLQILRKKLSFEEYVTLLSHCDLGYFNFKRQQGI
                     GTISLLISHNVPCVLHSANPFGLDLQAEKVPYLLAENLTASQIQTTKQQLKSIDKNRI
                     AFFAPGYTKLWQQRLIELMQNE"
     gene            3680..5101
                     /gene="glnA"
                     /locus_tag="PXE50_001954"
     CDS             3680..5101
                     /gene="glnA"
                     /locus_tag="PXE50_001954"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011298219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HDL5622830.1"
                     /translation="MSNAIANVSKLIQDNDIKFVLLKFTDIKGKEHGVSLPVSLVAND
                     LEDLFEEGKMFDGSSVEGWKAINKADMLLMPIAETAVVDPFARIPTLSIRCSIYDPNT
                     MQSYDRDPRSIATRAENYLKSTGIADSVMFGPEPEFFLFDDVRFSTEMNNVSYRIDDV
                     EAAWNTNRKFEEGNKAYRPLKKGGYCAVAPIDTAHDIRSEMCLLMEEMGLVIEAHHHE
                     VATAGQNEIATRFNSLTLKADETQIYKYIVQNVAVEHGKTACFMPKPFAGDNGSGMHC
                     NMSLSKDGKNVFMGDKYAGLSETALYYIGGIIKHAKALNAFTNPTTNSYKRLVPGFEA
                     PVLLAYSASNRSASIRIPAVTSPKATRVEARFPDPMANPYLCFAALLMAGLDGVINKI
                     HPGDAMDKNLYDLPPEELKDIPTVASSLESALDALSNDFEFLTQGGVFTKDFIDAYIG
                     IRRKEVERVNMTPHPVEFELYYS"
     gene            complement(5145..6288)
                     /gene="rffA"
                     /locus_tag="PXE50_001955"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
                     /pseudo
     CDS             complement(5145..6288)
                     /gene="rffA"
                     /locus_tag="PXE50_001955"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251256.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-amino-4,6-dideoxygalactose transaminase"
     gene            complement(6275..6919)
                     /gene="rffC"
                     /locus_tag="PXE50_001956"
                     /gene_synonym="wecD"
     CDS             complement(6275..6919)
                     /gene="rffC"
                     /locus_tag="PXE50_001956"
                     /gene_synonym="wecD"
                     /EC_number="2.3.1.210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-amino-4,6-dideoxy-D-galactose
                     acyltransferase"
                     /protein_id="HDL5622831.1"
                     /translation="MKPDQWLSDFFGREIVQVKVAADDFRQIARLQKQGFVLVEGELE
                     FELALATFSENMTACRPADMADLPDLNLLFGSAFPDSRFRSPYFSREENQRFYRTWIE
                     NAVKGKFDDIGLVQCNADGQIQGAVTVRLLAQQQAKIGLLAVKPDCRQQGIGSELLNA
                     AIAWAKQQNAKKLMITTQLSNQKAIRFYQAFGASIKAVYYWFYPALEKYDDEQS"
     gene            complement(6916..8163)
                     /gene="wecC"
                     /locus_tag="PXE50_001957"
     CDS             complement(6916..8163)
                     /gene="wecC"
                     /locus_tag="PXE50_001957"
                     /EC_number="1.1.1.336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetyl-D-mannosamine dehydrogenase"
                     /protein_id="HDL5622832.1"
                     /translation="MMSKTEFNTICILGLGYIGLPTSVVFANAGKQVIGVDINPQVVA
                     SLNQGNIHIIEPDLQTAFTQAVKKGNFFATAKPQPADAFIIAVPTPLCGKQPDLTYIQ
                     NAAAMIAPCLRKGNLVVLESTSPVGTTENLAEWLSQARPDLAFPADVSIAYCPERVLP
                     GNIMTELVENDRIIGGLSEQCGQQAVDLYQIFAKGRCVTTTARTAEMCKLVENSFRDV
                     NIAFANEISMICDALKINVWELIELANLHPRVNILQPGAGVGGHCLAVDPWFIVSTSP
                     QQARLIRTAREVNDSKPQWVIEQVKTSVADCAMEQDCKPSELTIACLGLAFKPNIDDL
                     RESPALAITRQLAAWHQGSLLAVEPNIQQLAGEKITLVDLNTALSQADILVLLVDHTS
                     FKQISREQIRQRHIIDCRGVWVR"
     gene            complement(8204..9016)
                     /locus_tag="PXE50_001958"
     CDS             complement(8204..9016)
                     /locus_tag="PXE50_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS chain length-determining protein"
                     /protein_id="HDL5622833.1"
                     /translation="MKTLFYRLLVLILFAAIGAGAGYGLSYTQPEKWKVTAQFEQPTI
                     PDLGNYYSLLSTYHFLNSNSQEANSQTAQQQASEQVYAEFKRNLTSADLLQAYLLQTE
                     AVKLKAQVAKKSPAVVAAELVEQFRFEKDMATSADNVSLIAENAEEAQKLLADFIPLV
                     NTQARDKLNADLIAKWKVLFQQIKTASELNINGKQGSQDWAAKLQMMRSVQPLDNQLT
                     AYRLVKSPSVPLKSESPDPPILADDWGIKWLTAGLYAQFCGESESSTCGTLI"
     gene            complement(9027..10091)
                     /gene="wecA"
                     /locus_tag="PXE50_001959"
     CDS             complement(9027..10091)
                     /gene="wecA"
                     /locus_tag="PXE50_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine--undecaprenyl-phosphate
                     N-acetylglucosaminephosphotransferase"
                     /protein_id="HDL5622834.1"
                     /translation="MWLTFLTVFIVSFLALIVMRPVAEFVGLVDKPNFRKRHQGLIPL
                     IGGIALFIGNLTFYFMQWQDMRLPELYLTAVTILLIIGVLDDRFDISPLLRAGIQAAL
                     AGAMIYSGLSLSSLGQIIAPFSIELGWLGIVFTVFITIGVINAFNMVDGIDGLLAGLS
                     SVSFAGLGTLMFINGEPSLGYWCFALIFVLLPYAMFNLSLFGAKWKVFMGDSGSMLIG
                     FTIIWILLLSTQGQGSPISPITGLWLIAVPLIDMVAVIIRRLKKGKSPFKPDRLHLHH
                     LMMRAGLTSRQALLVITLWAGFCSTIGVLGEVYYWNQWVMMLMFIGLFFLYAYSITHA
                     WRVTRFVRRLKRRAKRSKQL"
     gene            10233..11513
                     /gene="hemL"
                     /locus_tag="PXE50_001960"
     CDS             10233..11513
                     /gene="hemL"
                     /locus_tag="PXE50_001960"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005721785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HDL5622835.1"
                     /translation="MSISEQLFEQAQKVIPGGVNSPVRAFKGVGGTPVFIEKAEGAYI
                     TDSDGKQYIDYVGSWGPMVLGHNHPAIIDAVLKAVPKGLSFGAPTAAEITLAELVCKL
                     VPSIEMVRMVSSGTEATMSAIRLARGYTNRDKIIKFEGCYHGHSDSLLVKAGSGALTL
                     GQPSGPGVPADFAKHTLTCTYNDLDSVKAAFEQYPNEIACLIVEPVAGNMNCIPPQEG
                     FLQGLRDLCTQYGAVFIIDEVMTGFRVALGGAQSYYGVTPDLTTLGKIIGGGMPVGAF
                     GGKKEIMEYIAPTGPVYQAGTLSGNPIAMAAGLACLTELSKAGNETILAEKTKTLAEG
                     FKALADKHNVPLTVQYVGGMFGLFFTEQKAVNNFQEVMKCDAAKFNRFFHLMLEQGVY
                     LAPSAFEAGFMSLAHSDEDIARTLEAADKAFAQL"
BASE COUNT         3462 a         2743 c         2393 g         3136 t
ORIGIN      
        1 taaattggtc ggcgagatag gatttgaacc tacgacccac tggtcccaaa ccagttgcgc
       61 taccaagctg cgctactcgc cgtctgatac tcacaagagt attgaatggg gtggctaatg
      121 ggattcgaac ccacgacaac tggaatcaca atccagggct ctaccaactg agctatagcc
      181 accattgtgt tgatagtgcc gcattgacat ctggcgcgct cgacaagatt cgaacttgcg
      241 acctttggct ccggaggcca acgctctatc caactgagct acgaacgctt cgatttacat
      301 caattcaact taatgcgtcg caacggaggc gtatattata gatttcactt tcccttgtct
      361 agcacttttt aaaaaaaatg taaaaaaatg tattgtttgg ttttatttta ttcaaaacgt
      421 ttaataaata tcaaaaaatg cgttttttag agctgatttg tcagatagta ataggcatat
      481 tttagtaaat ttaattgtct ttgccagcgg gttggctgtt tcaatagtcg ataaagccat
      541 tccagcccca aattttgcca aattttaggt gctcgtttca ctttaccggc aaacacatcg
      601 taagtcccgc caacacccat atataaggct tgtggatatt gttgttgtaa ctgttggata
      661 aaaagttcct gttttggagt tcccattgcc acactaataa acttcgcgcc acttgcttta
      721 atttgctcta taacgtcctg ttcttgctcc gccttaaaat agccattctg cctaccgaca
      781 atattcacct tccattgtgc caattttgct tccaccttcg ttagggtatc cgccgagctg
      841 ccgaccaaaa acaccggcac atttaacgct ccggctcttt gcattaaggt ttcccataaa
      901 tcggctccgg caattcgctc tattttatag tttggatatt tttttcgaat cgattgaaca
      961 acactgatgc cgtctgcata gttgaactcg gcttcatcta tcactcggcg taacaacgga
     1021 tttttttccg acagaatcac tttctcagca ttaattgcca ctaatcttcc gaactgaatc
     1081 cgcttttcat tcatcagcca atttgcaaaa atttcccgat ttttgaccgc ttgtaacgca
     1141 atgccccgaa tgatcacttt atcgaacatt attatttttc cccattgaaa ggattttcgc
     1201 cagcaaatag caagccataa atatcagcgt gaaaaagcaa aaacgggaaa caaatgcatc
     1261 gattccctct cgcactaata cgatcaaatt gaataaattg ccgaagcagt aggcttgcaa
     1321 caaggcggaa ttgcacgctt tggcgtaagc gaataggtta tctaaggctt taatcatggc
     1381 agctactatc cccattccca acgccataac gctaaatccg cccataatat agaaagagcc
     1441 gagtaaggta ggcgaaatag ctaaccctga ttggttgcct aaaatcactt tggtaaaata
     1501 attcgccgta ttccagacga tctcagggcg ttcttgccat aaagattgtg ggatatatac
     1561 atagaaatcc cgcacaatcg gcattaaacc ttgatattcc acctcattag aaaatacacg
     1621 agccaaattt tcccaaggcg aaaaagtatc tcggcttaaa tataagaagg tgtaaatcat
     1681 ctcgctaccg gaaagggtaa gtttgtaacg ggctagagcg aggaagaaca tcgccaccac
     1741 gccgattagg cttacggcaa tcacctttga taacgacaga tagccttgct gcaatccaat
     1801 caataagaaa aagccaaccg ctagtgctaa atttgcccat gtgccgccca ctgccacata
     1861 gcttaatatg ccgaatgccc caccaacaat cagtaacgcc caccacgctg ttttattctt
     1921 atataggaag caaaaaatta acaacgccgg caataaaaag tagaaaaatc gttttaatgc
     1981 cgaaagtatg accctatctt tggcaaacag ttggctatat ttttcgagtt tgaaaagcag
     2041 aaaaccgttt aaataaagga aatatagcag ggcaacaact gccacagcgg caaggataca
     2101 agcggtcgtt tttgcctgaa aatttgcaac aagagcagtt ggttgcgaca cagcactcca
     2161 caagcgtgaa tagacaacgt aataaatcaa atagccaaca cctgctgccg taaaaacttg
     2221 ccattgtgtt tttagctccg gcagcgggta atcaaagcca aatgccatta ttaacgaaaa
     2281 cggaaaaccg gcgtaaaaag taacaaaata gagcaaacta aacagtaaat ggaaagaaat
     2341 ccccgatttc tgataaagtt gataaagtaa gctgaaaaat agcccgacag aaacaagata
     2401 aaatccgcca agtggtatta aattattcat tttgcattaa ttcgattaat cgctgttgcc
     2461 atagtttagt gtagcccgga gcaaaaaacg caatgcggtt tttatctatg ctctttagtt
     2521 gttgtttggt tgtttgaatc tgtgaagcag tcagattttc cgccaacaaa taaggcactt
     2581 tttctgcctg tagatccaac ccaaacggat tggctgaatg taacacacaa ggtacattat
     2641 ggctaatcaa aaggcttatc gtgccaatgc cttgctggcg tttaaaattg aaatagccga
     2701 gatcacaatg gctcaataac gtaacatact cttcaaagct cagcttcttc cgcaaaattt
     2761 gcaaattttc cgccaaaaat aaccgcttgc tataggcttc cacctgccga atatagcttt
     2821 cattattttc cgggtagccc attggtatga taatccgcac attgttccct agtcgttgat
     2881 gaatctcgct taaggcttga ataagctcat tcgctggatc gcctgaattg ccgagcaata
     2941 tcgtcaagcg atcattttgt gtggggctaa tttttatttg atcacctaat ttcgtgggga
     3001 aatagattaa atgatcctgt tctgatcttg tacgcatatt tcgccacaaa tgatccagat
     3061 cgcctcttgt tgcccaaacc tgtaagattt tttgttgggc aacacgccga aacgggtaaa
     3121 acagcttaaa tttccacgaa gttgccattt catataaatc cgccccccaa atatgccaaa
     3181 tcaggttggt ggtcggcaat ctgcctaagg ctatcgccag ccaaatccaa gggttaaact
     3241 gcccgtgtaa cagaaaacaa gcggtcggat tttgccgttt ttttgcaatt aaggcgttcg
     3301 caatcgcttt ttgtgaagag aactgcttaa tccgcaaatg aggaaaagca gtttgcagtg
     3361 aaggcttgcc taccacataa aaaaaatgtt cggagtctgg caataacggc aaaagctctt
     3421 gctgaaaaaa ggttaaaacc tgttggttat gatgctcaat ctcggagcct agaatatgat
     3481 aaatcggcaa cattacacgc ttttctctcc ccaccataca aacaatatgc aagcggtaag
     3541 attttagcaa aaatttgcaa cattactgca acttctttta gctttgaaac actaaaaaac
     3601 atcacacact tggttaaaaa atgctatgat aaccgagctt ttttattatt catttatccc
     3661 aacgaggact tattttacta tgtcaaacgc aatcgctaat gtatctaaac tgattcaaga
     3721 caatgatatt aaatttgtct tattaaaatt tactgatatt aaaggtaaag aacacggggt
     3781 ttcgctccct gtcagcttag ttgccaacga tttggaagac ttattcgagg aaggcaaaat
     3841 gttcgacggt tcgtccgtag aaggttggaa ggcaattaac aaagcagata tgttgttaat
     3901 gccgattgct gaaaccgctg tagttgaccc tttcgcccgt attcctaccc tttctattcg
     3961 ttgttccatt tacgacccaa acacaatgca gtcttatgac cgtgaccctc gctctattgc
     4021 aacccgtgcc gaaaactact tgaaatccac cggtatcgcc gatagcgtaa tgtttggacc
     4081 tgagcctgaa tttttcttat tcgatgatgt gcgttttagc accgaaatga acaatgtgtc
     4141 ataccgaatt gacgatgtag aagcggcttg gaataccaac cgtaaatttg aagaaggcaa
     4201 caaagcctat cgtccgttga aaaaaggcgg ctactgtgcg gttgcaccga ttgataccgc
     4261 ccacgatatt cgctccgaaa tgtgtttatt gatggaagag atgggtttag tgattgaagc
     4321 tcaccaccac gaagttgcga cagccggaca aaatgagatc gcaacccgat tcaacagcct
     4381 gaccttaaaa gccgatgaaa cccaaatcta taaatacatc gtgcaaaatg ttgccgtaga
     4441 acacggaaaa accgcttgct ttatgccaaa accgttcgcc ggcgacaacg gctcgggaat
     4501 gcactgtaat atgtcattaa gcaaagacgg caaaaatgtg tttatgggcg ataaatacgc
     4561 cggcttatct gaaactgccc tctactatat tggcggtatc attaaacacg caaaagcatt
     4621 aaatgccttt actaacccaa ccacgaactc ttataaacgt ttagtgccgg gttttgaagc
     4681 accggtgtta ttggcatatt ctgcaagtaa ccgctctgcc tctatccgta ttccggctgt
     4741 gaccagtccg aaagcgaccc gtgtagaagc acgcttcccg gatccaatgg caaacccata
     4801 cctttgcttt gccgccctgt taatggctgg cttagacggt gtgatcaaca aaatccaccc
     4861 gggcgatgca atggataaaa acttatacga tttaccgccg gaagagttaa aagatattcc
     4921 aacggttgcc tcgtctttag aatccgctct tgacgcatta agcaatgatt ttgaattctt
     4981 aacacaaggt ggcgtgttca cgaaagactt tattgatgct tatatcggta ttcgtcgcaa
     5041 agaggtggaa cgtgtaaata tgactccgca cccggtagaa tttgaacttt actattcata
     5101 gtaacaacat atagcaaaaa acggctgaaa cactcagccg ttttttattg attgaagaaa
     5161 gcaagcactg cttgaataac acgctcttgc tcctgcttac tcaaattata aaacagtggc
     5221 aatcttacca accgttcgct ttctaaggta gtaaagcgat catcacctgc taatcgacct
     5281 aatttctgcc ctgccggact gctgtgcaac ggcacataat gaaacacggt taagatattc
     5341 tgtgccttca taaaatcaat aaaagcagtt ctctgcttca agtcacttag ctttaagtag
     5401 aacaaatgcc cgttatggcg acaatattcg ccaatgcgag gaagctcgca cttagctgtt
     5461 tgggcaagtg gcaaaaaggc ttgatagtaa ttgtgccaaa gggttaaacg ctgttggttg
     5521 attttatctg cctctataag ctgagcatac aaataagccg cttgaatttc cgacattaaa
     5581 aaacttgaac caatatcctg ccagcgatat ttatctacct caccacgaaa aaattggcta
     5641 cggttagtgc ctttctctct gatgatttcc gctttttcca gcaaatgcct cattaatcac
     5701 gatcgcccca ccttcaccgc cagcggtata gtttttggtt tcgtgaaaac tatagcaacc
     5761 aatatgcccg atggaaccta acgccctacc tttataaaac gaattgactg cctgtgccgc
     5821 atcttctacc acataaagcc cgtatttttc ggctgttgcc attattgaat ccatatcaca
     5881 agcaatgccg gcataatgca ccggcacaat cactttggtt tttggggtaa tggcttgctc
     5941 aattttgcgt tcatcaatat tcattgtatc cggacgaata tccacaaaca caatctttgc
     6001 cccacgcaac gcaaacgcat ttgcagtaga gacaaaagta tagctcggca taatcacttc
     6061 atcgtccggc tgaatatcca gcagtattgc cgccatctct aacgcagccg tgcaagaagg
     6121 ggtaagcaac actttgctac gggccaggtt ttcaagccac tgctcacata agcgggtgaa
     6181 tttaccaccg cccgaaagct gccctgttgc catcgcctgt tctatatagg cttgctccgc
     6241 ccccacaacc gggggttgat taaacggaat aaaatcagga ttgttcatca tcgtattttt
     6301 ccaaagcagg gtaaaaccaa taatacaccg ccttaatgct tgcaccaaac gcttgataaa
     6361 aacgaatcgc tttctggtta ctcagctgag tggtaatcat cagttttttc gcattttgct
     6421 gtttcgccca cgctatcgca gcatttaaca attccgagcc aataccttgt tgtcggcaat
     6481 caggctttac cgccaataat ccgattttcg cttgctgttg ggcaagtaag cgaaccgtta
     6541 ccgccccttg aatttgcccg tcagcattgc attgaaccaa gccaatatca tcaaacttgc
     6601 cttttaccgc attttcaatc caagtccggt aaaagcgttg attctcttcc cttgaaaaat
     6661 agggcgaacg aaaccggcta tcgggaaatg ccgaaccaaa caataagttc aagtcgggca
     6721 aatctgccat atccgccggg cgacaagcgg tcatattttc agaaaatgtt gcaagtgcca
     6781 gctcaaattc caattctccc tccacaagta caaaaccttg tttttgcaac ctagcgattt
     6841 gcctaaaatc atcagccgct acttttactt gcacaatttc tctaccgaaa aaatcggaca
     6901 gccattgatc cggcttcatc ttacccacac tcctcgacaa tcaataatat gccgttgcct
     6961 gatctgttcc cttgaaattt gcttaaatga agtgtgatcc actaacaaga ctaaaatgtc
     7021 tgcctgcgaa agtgcggtgt tgagatcgac taaggtgatt ttttcgccag ccagctgttg
     7081 aatatttggc tcaaccgcca acaggctacc ctgatgccaa gcggcaagtt gccgggtaat
     7141 cgctaatgcc gggctttccc gcaaatcatc aatattcggc ttgaaagcta gccctaaaca
     7201 agcgatggtt agctcacttg gcttacaatc ttgctccatc gcacagtctg cgaccgatgt
     7261 tttcacttgc tcgattaccc attgcggttt gctgtcattc acttctcgtg ccgtgcgaat
     7321 aaggcgagcc tgttggggcg atgtggaaac gataaaccac gggtcaaccg ccaaacaatg
     7381 tccgcccacc cctgctccgg gctggagaat atttactctc gggtgaagat ttgccaattc
     7441 aattagctcc cacacattga tcttcaacgc atcacaaatc attgaaattt cattggcaaa
     7501 ggcaatgttc acatcacgaa agctgttttc caccaacttg cacatctccg ctgtgcgagc
     7561 tgtggtggtg acacaacgtc cttttgcaaa aatttggtat aaatcgaccg cttgttgacc
     7621 gcattgttcg cttaatccgc cgataatgcg gtcattttca accaattccg tcattatatt
     7681 acccggcaaa acacgttcag ggcagtaggc aatagacaca tcggctggaa aggctaaatc
     7741 agggcgagct tggcttagcc attcggctaa attttctgtt gtaccgacag gcgaagtgga
     7801 ctccagcacc accaaattcc ctttacgcaa acaaggggca atcatagcgg cggcattttg
     7861 aatataagtg agatcgggct gcttcccgca aagtggggtt ggcacggcga tgataaaagc
     7921 atcggccggt tgcggtttgg cagttgcaaa aaaattacct tttttgaccg cttgtgtgaa
     7981 ggcagtttgt aaatccggct cgataatatg aatgttgcct tgattaaggc ttgccaccac
     8041 ttgcggatta atatccaccc caattacttg cttgccggca ttggcaaaaa cgactgaggt
     8101 cggcaagccg atatagccta accccagaat acaaatagtg ttaaattcag ttttactcat
     8161 catcagttac aaagagaaat ggcacactaa attgtgtgcc attttagatt aaagttccgc
     8221 aggttgagct ttcgctttca ccgcaaaact gagcataaag cccagcagta agccacttaa
     8281 tgccccaatc atcagccaaa ataggcggat caggcgattc tgatttaagt ggaacgctag
     8341 gcgatttaac caagcgataa gctgtaagtt ggttgtctaa cggctgaaca gaacgcatca
     8401 tttgcagttt agctgcccaa tcttgtgagc cttgcttacc gttaatattc aactccgaag
     8461 cagttttaat ttgctggaac aagactttcc atttcgcaat taaatcggcg tttaatttat
     8521 ctcgagcttg ggtgtttacc aacggaataa aatcggctaa taatttttga gcctcttccg
     8581 cattttctgc aattaagctg acattatctg ccgaagttgc catatctttt tcaaaacgga
     8641 attgttcaac taattcagcc gccaccaccg ccggtgattt ctttgcaacc tgagctttta
     8701 atttcaccgc ttctgtttgt agcaaatagg cttgaagcaa gtcggcggac gtgaggttgc
     8761 gtttaaattc cgcataaacc tgctcacttg cctgttgctg tgccgtttgg ctattcgctt
     8821 cttggctatt actattcaaa aaatggtagg tggaaagtaa cgagtaataa ttacctaaat
     8881 cgggaatagt cggttgctca aattgagcgg tcactttcca tttttcaggt tgagtataac
     8941 tcagcccata accggcacct gccccgatag cagcaaataa aattagcact aaaagtcgat
     9001 aaaataaggt tttcacaaca tatcctttaa agttgtttgc tacgttttgc acggcgtttt
     9061 agacggcgaa caaaacgggt tacacgccaa gcgtgggtaa tggaataggc gtataggaaa
     9121 aacagcccga taaacattag catcatcacc cactgattcc aataatacac ctcgcctaat
     9181 accccaatgg tggaacaaaa tcccgcccag agggtaatca ccaataatgc ttggcgagag
     9241 gtaagccctg ctcgcatcat taaatggtgt aggtgcaagc ggtctggttt gaacggactt
     9301 ttaccttttt tcaaacggcg gataatcacc gcaaccatat caattaacgg cacggcaatc
     9361 agccacaaac cggtaatcgg gctaattggc gagccttgcc cttgggtgct taacagcaga
     9421 atccaaataa tggtaaagcc gatcagcata ctgcctgagt cgcccataaa cactttccat
     9481 ttcgccccaa acaggctcaa attgaacatt gcatacggca acaacacaaa gataagggca
     9541 aagcaccaat agcccaaact tggttcgcca ttaatgaaca ttaaagtgcc aagaccggca
     9601 aaactcacgc tggaaagccc tgctaataag ccatcaatcc catctaccat attaaacgca
     9661 ttaataacgc caatggtgat aaacacggta aagacaatgc cgagccaacc taattctata
     9721 ctaaaggggg caataatttg ccctaaactg ctgagcgaca agccactgta aatcatcgcc
     9781 ccagctagtg ctgcttgaat cccggcacgc agtaatgggc tgatgtcaaa tcggtcatct
     9841 aacacgccga taatcagcaa aatagttacc gctgtcagat acagttccgg cagccgcata
     9901 tcttgccact gcataaaata gaaagtgaga ttgccgataa ataatgcaat accaccgatt
     9961 aacggaatca acccctgatg gcgtttacgg aagttgggct tatctaccaa accaacaaat
    10021 tccgccaccg gacgcatcac aatcagggct aaaaaagaaa caataaatac ggttaaaaaa
    10081 gtaagccaca tacagggatt gcctcaaaaa atgagtcata aaataggaat gcagaatagc
    10141 ataaggcaac aaaatcgtaa attttttagc gaaaacaagg gcttttcagt acaataacag
    10201 gcaaattttt acatcaaaag aaaggaattg atatgtctat ttcagaacaa ctgtttgaac
    10261 aagcccaaaa agtgattccg ggcggtgtga actcccctgt gcgtgcattt aaaggcgtgg
    10321 gcggcacacc ggtttttatt gaaaaagccg aaggtgctta tattaccgac agcgacggca
    10381 aacaatatat cgactatgtc ggctcttggg ggccaatggt actcgggcat aaccacccgg
    10441 cgattattga tgcggtgcta aaagccgtgc caaaaggctt aagtttcggt gccccaacgg
    10501 cagcagaaat cacacttgcc gaattagtgt gcaaattagt accttctatt gaaatggtga
    10561 gaatggtgag cagcggaaca gaggcaacaa tgtctgccat tcgtttggct cgtggctata
    10621 ccaaccgaga taaaatcatc aaatttgaag gctgctacca cgggcattcc gattctctgt
    10681 tagtaaaagc cggttcaggt gctttaaccc tcggtcagcc aagcggcccg ggcgtacccg
    10741 ctgatttcgc caagcatacg cttacttgca cctataatga tttagattca gtaaaagcag
    10801 catttgagca atacccaaat gagatcgctt gtttaattgt tgagcctgtt gccggcaata
    10861 tgaactgcat tccgccacaa gaaggctttt tacaaggctt acgtgatctt tgcacacaat
    10921 atggtgcggt atttattatt gatgaagtaa tgaccggctt ccgtgtcgca ctcggtgggg
    10981 ctcaatctta ctatggggta acaccggatt taaccacact cggcaaaatt atcggcggcg
    11041 gaatgccggt gggggcattt ggtggtaaaa aagagattat ggaatacatc gctccaactg
    11101 gcccggttta ccaagccggc acgctctcag gcaacccgat tgcaatggct gcaggtttgg
    11161 catgcttaac tgaattatca aaagcaggaa atgaaaccat tttagcggaa aaaaccaaaa
    11221 ccctcgctga aggctttaaa gctcttgcag ataagcacaa tgtgccatta acggtacaat
    11281 atgtcggcgg aatgttcggc ttattcttca ccgaacaaaa agcagtaaac aacttccaag
    11341 aagtaatgaa atgtgatgcc gccaaattca accgtttctt ccacttaatg ctggaacaag
    11401 gcgtgtattt agccccatcg gcattcgagg cagggtttat gtctttagct cacagtgatg
    11461 aagatattgc tcgtacgcta gaggctgcgg ataaggcatt tgctcagctt tagaagaatg
    11521 acaagcggtt gggtttactc aataatttgc aagtttttga gggaatttga ccgcttgtag
    11581 tgcaaatttc tcttacgata gcaattatga tggtgttcgt ctctgacgag tgcttataca
    11641 aactttcatt atgcttaaac aagcacccgt ctggagacgg gcgctatcga gggaatagga
    11701 ttgataaagc aatatatggg cttccaacac ttgc
//
LOCUS       DANLZQ010000086        11670 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.086, whole genome shotgun sequence.
ACCESSION   DANLZQ010000086 DANLZQ010000000
VERSION     DANLZQ010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11670)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11670)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11670
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.086"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            151..897
                     /gene="znuC"
                     /locus_tag="PXE50_001961"
     CDS             151..897
                     /gene="znuC"
                     /locus_tag="PXE50_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter ATP-binding protein ZnuC"
                     /protein_id="HDL5622836.1"
                     /translation="MVSLENIEVSFNGQKALQNINLSIYPNSITTIVGPNGGGKSTLL
                     KILLKLLSPNKGKVIHQKGLKIGYVPQKLHLEPSMPITVYRFLALKPHTTKEMINQAL
                     DLFSITHLTENSMQKLSGGELQRVLLARAILDRPQLLVLDEPMQGVDIIGQTELYQLL
                     NKTRDLLNCAILMVSHDLNIVMANTDEVLCINKHICCAGSPEVITHDPSFIHFFGDQF
                     ARNVAFYSHKHNHHHNLHGDICLGECSCEH"
     gene            1062..3875
                     /gene="sucA"
                     /locus_tag="PXE50_001962"
     CDS             1062..3875
                     /gene="sucA"
                     /locus_tag="PXE50_001962"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HDL5622837.1"
                     /translation="MQYTHFDDWLASSALGGANQSYIEEIYEQYLENPANVDESWRNI
                     FDSFPKTPQVEQAHTPIRDYFRKLAREQQPQSVTIIDPEAGAKQVRLLQWINAHRFRG
                     YLEAKLDPINYYRWKTSSVPELDYKYHGFTDEDLNETFTVGRYVYDKDTMKLSELDKA
                     LKETYLGPIGLEFMHVQDIEQRNWLQAKMESVLNKPLFTKAEKLNLLSELTAADGLER
                     YLGAKFPGAKRFSLEGSDAFIPMMKEIIRHASRQGMTDVVLGMAHRGRLNMLVNVFGK
                     RPAELFDEFAGKHADESRTGDVKYHQGFSSNFAVDDKNVHLTLAFNPSHLEIVSPVVI
                     GSVRARQERMRDIEHEKVLAVTVHGDSAVAGQGVVQETLNMANVRGYKVGGTIRIVIN
                     NQIGFTTSNPNDTRSTEFCTDIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRTKFKRD
                     IFIDLISYRRHGHNEADEPLATQPMMYSIIKKHPTPRKVYADRLITEGVLTNEQEIEM
                     LNLYRDALDNGECVVPEWREMDMAAVDWLQYLNYDWTALYESKFPEERFLTIAKRVCE
                     YPASLKAHSRVEKIYTDRKEMYEGKKLFDWGMAETMAYATLLDEGTHVRLSGEDAGRG
                     TFFHRHAVIHNQNDGTGYVPLTQLHANQGRFQVWDSVLSEEAVLAFEYGFATTDPKTL
                     TIWEAQFGDFANGAQIVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARVERY
                     LQLCAQQNIQVCVPSTPAQVYHMLRRQAIRKMRRPLVAITPKSLLRHPLAVSSLDELI
                     NGSFQNVIGELDNIDPKQVKRVVMCSGKVYYDLIEKRRENNQTDVAIIRIEQLYPFPL
                     EEMQQILEPYAHVKDFVWCQEEPLNQGAWYCSKHNFEASLPEDAKLTYAGRPASASPA
                     VGYPSLHAKQQKQLVEDALTIAE"
     gene            3978..5207
                     /gene="odhB"
                     /locus_tag="PXE50_001963"
     CDS             3978..5207
                     /gene="odhB"
                     /locus_tag="PXE50_001963"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005654196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HDL5622838.1"
                     /translation="MTIEILTPDLPESVADATVATWHKKVGDNVKRDEILVEIETDKV
                     VLEVPASSDGILAEITQEQGATVVSKQSLGKLVVAKAGDISSATIEQKTESTPSDRKH
                     AAIENSHANADDQGPAIRRLLAEHDLQAADIQGSGVGGRITREDIEKEIAKRVQINQV
                     KGSATSQNTVSTVAFNSRSEKRVPMTRLRKRIAERLLEAKNTTAMLTTFNELDMQPIM
                     NLRKTYGEKFEKQHGVRLGFMSFYIKAVVEALKRYPEINASIDGDDVVYHNYFDISIA
                     VSTPRGLVTPVLRDCDKMSMADIEKKIKELAEKGRDGKLTVEDLTGGNFTITNGGVFG
                     SLMSTPIINPPQSAILGMHAIKDRPVAIDGQVVIRPMMYLALSYDHRLIDGKESVGFL
                     VAVKELLEDPTRLLLEI"
     gene            5500..6660
                     /gene="sucC"
                     /locus_tag="PXE50_001964"
     CDS             5500..6660
                     /gene="sucC"
                     /locus_tag="PXE50_001964"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HDL5622839.1"
                     /translation="MNLHEYQAKQIFKQYGLPVSQGIACKTAEEAVEAIKQLQGEQWA
                     IKCQVHAGGRGKAGGVKLVRNEAEVREFADKWLGKRLVTFQTDANGQPVNTLYLEETC
                     NIDRELYLGAVVDRSAQKVIFMASSAGGMNIEEVAEKTPELIHKAVIDPLTGGQGYQG
                     RELAFKLGLKGDEVKQFADIFVKLANLFVEKDLALLEVNPLVITKEGQLLCLDAKMSI
                     DSNALYRHPELKELQDPSQDDEREAEAEKWNLNYVALDGNIGCMVNGAGLAMGTMDIV
                     KLYGGKPANFLDVGGGATKERVAAAFKLILSDPNVKAVLVNIFGGIVRCDLIADGVIA
                     AVNEVGVNVPVIVRLEGTNAAQGREILANSGLSILAASSLKQAAELAVKSAN"
     gene            6669..7538
                     /gene="sucD"
                     /locus_tag="PXE50_001965"
     CDS             6669..7538
                     /gene="sucD"
                     /locus_tag="PXE50_001965"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HDL5622840.1"
                     /translation="MSILIDKNTKVICQGFTGGQGTFHSEQALAYGTQLVGGVSPNKG
                     GTTHLGLPVFNTVREAVEATGATATVIYVPAPGCKDAILEAIDAGIQLIVCITEGIPT
                     LDMLQVKQRLNQTGVRMIGPNCPGVITPDECKIGIMPGNIHKKGNIGIVSRSGTLTYE
                     AVKQTTDEGFGQSTCVGIGGDPIPGSNFIDILKLFQDDPETEAIVMIGEIGGSAEEEA
                     AAFIKENVTKPVVSYIAGVTAPKGKRMGHAGAIISGGKGTADEKFKILEDAGVTTVRS
                     LAEIGSALRKILG"
     gene            complement(7609..9054)
                     /locus_tag="PXE50_001966"
     CDS             complement(7609..9054)
                     /locus_tag="PXE50_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine:cation symporter family protein"
                     /protein_id="HDL5622841.1"
                     /translation="MDSIILFFESVLTWIVNTIDGPLWDVTIILLLGAGLFFTLTTGF
                     VQLRLLPQSLREMWGGRSTEGKSLTPFQAFTTGLASRVGVGNIGGVATAIALGGPGAV
                     FWMWITALMGMSSAFAESSLAQLYKTKDPNGMFRGGPAYYITRGLKLPSLAIAFAVTL
                     IFTFGFAFNAVQSNSIVEATKNAWDWNPVYVGMTLVVITGLIISGGVKRIGKVSAQVV
                     PMMALFYLIIAVIILGMNIEKVPSIISLIIESAFDFSAAAGGTFGALVSKTMLMGIKR
                     GLFSNEAGMGSAPNSAATSDAKHPASQGLIQMLGVFVDTIVVCTCTAVIILMSNNYGG
                     ETLRGISLTQSALQFHLGEFGLHFLAFVILLFCFTSIIGNYAYAETNIRYIKNSPWFV
                     WGFRAIVLFFVYFGAVRDGGIVWAFADTVMASMAVINLVAILILAPIVWIILKDYLRQ
                     VKSGKEPVFRIEEHQDLIHKGVDPLIWKSKE"
     gene            complement(9159..10145)
                     /locus_tag="PXE50_001967"
     CDS             complement(9159..10145)
                     /locus_tag="PXE50_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel/cobalt transporter"
                     /protein_id="HDL5622842.1"
                     /translation="MRLKATYWGMIVIGFLSLFALYQLYPMILFKVMEWQKNFNLQLS
                     ASLNELAENQSKAGITLVFISFLYGVFHAVGPGHGKFILSSYLSFEKTKLNQAMKITF
                     ASALVQGLVAISLVTVIVVIFTLSRQYFNLTLKWVERGSFGLMILFGIYWCYQVYRTV
                     NRARKPIIKSIRISQKKAGKLPLVTQKGHIHTENCSCRHKHLPTSNEMQQVRDWKAQL
                     MLVLSIGSRPCSGAILVLFLSYTLNLYAWGVISALAMAVGTGLTLSLFAYLVIIARNK
                     AVKVSQWYFSAQINRNIVWILKFTLGLALILFGMVLFHSSFIDAGTGVFFKR"
     gene            complement(10136..10774)
                     /locus_tag="PXE50_001968"
     CDS             complement(10136..10774)
                     /locus_tag="PXE50_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1007 family protein"
                     /protein_id="HDL5622843.1"
                     /translation="MKFIKTIITLIALYSMPVFSHPHSFVDLKTNVIVEGSMLKSFQM
                     EWMLDEIASSELIYEVKNSQDKEKTQQNITAEMVQTALQNHYFSTLYDSQNQPIKFTT
                     KPTATRFEIKNNRVIFYITFHLAKPHELKQSKVRFYTYEPSYYIAMEYNRPADVNTSN
                     ASCKATLVQPQVDSKLRLYASGLDKNQSLDMPENGDYSLGAQFAQKVEIICD"
     gene            complement(10835..11213)
                     /gene="rnpB"
                     /locus_tag="PXE50_001969"
     ncRNA           complement(10835..11213)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="PXE50_001969"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
BASE COUNT         3663 a         2516 c         2300 g         3191 t
ORIGIN      
        1 ttcatttaat ctattgtcac aacacgaaaa atcagctaat tttaactcaa tacccctaat
       61 ttttttatat caatgaaaat ccatcatctt aaaccgaatc taaataccac tacatttgaa
      121 ctattcaaac agaatttatc cgcgacatca ctggtttctc ttgagaatat tgaagtgtct
      181 ttcaatggac aaaaagcatt acaaaatatt aatttatcta tttatcctaa ctctatcacg
      241 acgatagtcg ggccaaatgg tggaggaaaa tctaccctgc ttaaaatttt gctaaaatta
      301 cttagcccaa ataaaggaaa ggttattcat caaaaaggac tcaaaattgg ctatgtacca
      361 caaaaattgc atttagaacc ctcgatgccc attactgttt atcgatttct tgcgctaaaa
      421 ccacatacta ccaaagaaat gattaaccaa gcactagatc tgttttctat tacccatctc
      481 actgaaaata gtatgcaaaa attatcgggt ggtgaacttc aacgtgtatt gctggctcgg
      541 gcaattttag atcgtccgca actcttagtg ttagatgaac caatgcaagg cgttgatatt
      601 ataggccaaa ccgaactcta tcaattactt aataaaacaa gggatctcct taactgtgct
      661 attttaatgg tctcacacga cttaaatatt gtgatggcga atacagatga agtgctttgc
      721 atcaataaac atatttgttg tgccggaagc cccgaagtca ttacacacga tccgagcttt
      781 atccattttt ttggcgacca atttgcacgt aatgttgcat tttattcaca taaacataac
      841 catcaccata atttacatgg cgatatctgc cttggtgaat gtagttgtga gcactgatag
      901 gcgtcctttt taccaaatgt ttaaaatttg taaaaataat gctaaaaata accgcttgca
      961 gcacaagatt tatctaaaaa tcagacttac ttcacatttt atttgcttaa attggagtat
     1021 aataagggcg tgatttcata ccacaaacag gtcaggtctt tatgcaatat acacattttg
     1081 atgattggct tgcatcatct gcattaggcg gtgcaaacca atcttatata gaagaaattt
     1141 atgaacagta tctagaaaat ccagcaaatg ttgatgaaag ctggagaaac atctttgatt
     1201 catttcctaa aactccccaa gttgaacaag ctcacacccc tattcgtgac tatttccgta
     1261 aattagcccg tgaacagcaa cctcaatccg tcactattat tgacccagaa gcaggggcga
     1321 aacaagttcg cttactgcaa tggattaacg ctcaccgttt ccgtggctat ttagaggcaa
     1381 aactagaccc aattaactat taccgttgga aaacctccag cgtgcctgaa ttggactaca
     1441 aatatcacgg cttcaccgat gaagatctca acgaaacttt tacggtcggt cgctatgtct
     1501 atgataaaga cacaatgaag ctcagcgaac tggataaagc cctaaaagaa acttatttag
     1561 ggcctattgg tttagaattt atgcacgttc aagatattga acaacgcaac tggcttcaag
     1621 ccaaaatgga aagcgtgcta aacaaaccgc tgttcaccaa agcagaaaaa ctgaatttat
     1681 taagcgaatt gaccgctgcc gatggtttag agcgttactt aggggcaaaa ttcccggggg
     1741 caaaacggtt ctcattggaa ggtagtgatg cctttattcc gatgatgaaa gaaattatcc
     1801 gccacgcttc ccgtcaaggt atgaccgatg tggttttagg tatggcacac cgtggtcgtt
     1861 tgaatatgtt agtgaacgta tttggtaaac gcccggcaga attgtttgat gaatttgccg
     1921 gcaaacacgc tgatgaaagc cgcacgggcg atgtgaaata ccaccaaggt ttctcctcaa
     1981 actttgccgt agatgataaa aacgttcacc ttacccttgc tttcaaccca tcgcatttag
     2041 agattgttag cccggtggta atcggctcag tgcgtgcaag acaagaacgt atgcgtgata
     2101 tcgaacacga aaaggtgctt gcggtgaccg ttcacggtga ctctgcagtg gcagggcaag
     2161 gtgtagtgca agaaacctta aatatggcaa atgttcgtgg ctataaagta ggaggcacta
     2221 tccgtattgt gatcaacaac caaatcggat ttaccacctc taacccaaat gacacccgct
     2281 ccaccgaatt ttgtaccgac attgccaaaa tgattcaggc accgattatt cacgttaatg
     2341 gtgatgatcc ggaagctgtt gcctttgcag cgagaatggc tgtggaatat cgtactaaat
     2401 ttaaacgtga tatttttatt gatttaatct cttaccgtcg tcacggtcat aatgaagccg
     2461 atgagccttt agcaactcag ccaatgatgt atagcatcat caaaaaacac ccgacacctc
     2521 gcaaagtcta tgcggatcgt ttaattaccg aaggtgtttt aaccaacgag caagaaatcg
     2581 agatgttaaa cctgtatcgt gatgccttag acaacggcga atgcgttgtg ccggaatggc
     2641 gtgaaatgga tatggcagcg gtcgattggc tacaatatct caattacgac tggactgccc
     2701 tatacgaaag taaattccct gaagaacgat tcttaaccat tgccaaacgg gtgtgcgaat
     2761 atccggcttc gcttaaagct cattctcggg ttgaaaagat ctacactgat cgcaaagaga
     2821 tgtatgaagg caagaaatta ttcgactggg gtatggctga aacaatggca tacgctactt
     2881 tgttagacga aggcacacat gttcgccttt caggagaaga tgccggacgt ggcactttct
     2941 tccatcgcca tgcggtaatc cataaccaaa atgatggaac aggctatgtg ccacttactc
     3001 aactgcacgc caatcaaggg cgtttccaag tatgggattc cgtactctct gaagaagcgg
     3061 tactcgcctt tgaatatggc tttgccacta ccgacccgaa aacactgacc atttgggaag
     3121 ctcaatttgg agatttcgct aacggagctc aaattgttat cgaccaattt atcagctcag
     3181 gcgaacaaaa atggggcaga atgtgcggtt tagtgatgtt attaccacac ggctatgaag
     3241 gtcaagggcc ggaacactcc tctgcccgag tggaacgcta tttacagctt tgtgctcagc
     3301 aaaatattca agtttgcgtg ccatcaacac cggcacaggt ttaccatatg ttacgccgtc
     3361 aagcgatccg caaaatgcgt cgcccattgg ttgcaatcac accaaaatca ttgctacgcc
     3421 acccacttgc ggtgtcatct cttgatgaat tgattaacgg ttcattccaa aatgtgattg
     3481 gcgagctcga taatatcgat cctaaacaag tcaaacgtgt ggtgatgtgt tcgggtaaag
     3541 tgtactacga cttaattgaa aaacgccgtg aaaataacca aacggacgtt gccattattc
     3601 gtatcgaaca gctctacccg ttcccacttg aagaaatgca acaaattctc gagccttacg
     3661 ctcacgttaa agactttgtc tggtgtcaag aagagccact aaaccaaggt gcgtggtatt
     3721 gcagcaagca caattttgag gcttctctgc cggaagatgc aaaattaact tacgcaggca
     3781 gaccggcttc tgcttcaccg gcggtgggtt atccatcgtt acacgcaaaa caacaaaaac
     3841 aacttgttga agatgcttta acgatcgctg aataataaaa tgggcgtata tacgccctac
     3901 aagcggttca cttttaacca aattttacaa tttacgctgt cggagtttta aaactctctc
     3961 gaaaaaagga ataagttatg accattgaaa ttttaacccc cgatttaccc gaatctgttg
     4021 ccgatgcgac cgttgccact tggcataaaa aagtgggcga caatgtaaaa cgtgatgaaa
     4081 ttttagtcga aattgaaaca gacaaagtcg ttttagaagt accggcttca agcgatggta
     4141 ttcttgcaga aattacccaa gaacaaggtg ctactgttgt atccaagcaa tctctgggta
     4201 aattagtagt agctaaagcc ggtgatatta gctctgcaac tattgagcaa aaaacagaat
     4261 ccacgccatc agaccgcaaa cacgcagcaa ttgaaaacag ccacgcgaac gctgatgatc
     4321 aagggcctgc gattcgccgt ttattagccg aacacgactt acaagccgct gatattcaag
     4381 gcagtggtgt aggcggcaga atcacccgcg aagatattga aaaagagatt gccaaacgag
     4441 tgcaaatcaa ccaagtaaaa gggtctgcaa ccagccaaaa caccgttagc actgtagcat
     4501 ttaacagccg tagcgaaaaa cgtgtgccga tgacacgact ccgcaaacgt attgccgaac
     4561 gcttactaga ggcaaaaaac accactgcaa tgctcactac ttttaacgag ctggatatgc
     4621 aaccaattat gaatttacgc aaaacctatg gcgaaaaatt cgaaaaacaa cacggtgtgc
     4681 gtttaggctt tatgtcgttc tacattaaag ccgtggttga agcattaaaa cgctaccctg
     4741 aaatcaatgc ctccattgat ggcgatgatg tggtttatca taactatttc gacatcagca
     4801 ttgcggtttc taccccacga ggcttagtca cacctgtgtt gcgtgattgc gacaaaatga
     4861 gtatggcaga tattgagaag aaaattaaag aacttgccga aaaagggcgt gacggcaaat
     4921 taaccgttga agacttaacc ggcggtaact ttaccatcac caacggcggg gtattcggtt
     4981 cattaatgtc caccccaatt atcaacccgc cacaaagtgc gattttgggt atgcacgcta
     5041 ttaaagaccg ccctgtcgcc attgacggac aagtagtgat ccgcccgatg atgtacctag
     5101 ccttaagcta tgaccaccgt ttaattgacg gtaaagaatc tgtcggtttc ttagtggcag
     5161 ttaaagagtt attagaagac ccaacccgtc ttcttttgga aatttaatcg aaaatatgac
     5221 cgcttgtact tttagctaca agcggtctgt ttttaataaa atttgacaaa atccgataaa
     5281 cgctctattt gagttccctt ctgagccacc tgagcgactt tgaatttgta ggaaaaattt
     5341 agtgtttgag cttacaaggc aagcgagtta taaatttttc cgtcaagcaa attcaaacta
     5401 agcgaagaaa gtggcgaagc agggtgtgct ttcttttggt tacttttctt tgcacaagca
     5461 aagaaaagta acataaaaaa aaccaaacga ggaaactcta tgaatctaca cgaatatcaa
     5521 gcaaaacaaa tattcaaaca atacgggctt cccgtaagcc aagggattgc ttgcaaaacg
     5581 gcagaggaag ccgttgaggc aattaaacaa ctacaaggtg aacaatgggc gataaagtgc
     5641 caagttcacg ctggtgggcg tggcaaagcc ggcggggtga aactggttcg caatgaagcc
     5701 gaagtgcgtg aatttgccga taaatggctc ggcaaacgct tagttacctt ccaaaccgat
     5761 gctaatgggc aaccggttaa taccttatat ttagaagaaa cctgcaatat cgaccgtgaa
     5821 ttgtacttag gtgcagtggt tgatcgctcc gctcaaaaag tgatttttat ggcatcaagt
     5881 gccggtggta tgaatattga agaagtagcg gagaaaaccc ctgaattaat tcacaaagcg
     5941 gtaattgacc cactcaccgg tgggcagggt tatcaagggc gtgaattagc atttaaatta
     6001 ggcttgaaag gtgatgaagt taaacaattt gcggatattt tcgtgaaact ggctaaccta
     6061 tttgttgaaa aagatttagc tttattagag gtaaatccac ttgtcatcac taaagaaggg
     6121 caactactct gcttagatgc aaaaatgtcg attgacagca atgctctcta ccgccaccca
     6181 gaacttaaag agttgcaaga cccatcgcaa gatgacgaac gtgaagctga agcggaaaaa
     6241 tggaatctca actacgttgc actagatggc aatatcggct gtatggtaaa cggtgcgggg
     6301 ctggcaatgg ggacgatgga tatcgtcaaa ctttatggtg gtaaaccggc taacttctta
     6361 gacgttggcg gtggtgcaac caaagagcgt gtagcagcag cttttaaatt gattttatct
     6421 gatccgaatg tgaaagccgt gttagtcaat atttttggtg gtatcgtccg ctgcgatttg
     6481 attgctgatg gcgtcattgc tgctgtaaac gaagtcggcg tgaatgtgcc tgttattgtg
     6541 cgtttagaag gcactaatgc cgcacagggg cgtgagattt tagccaatag cgggctgagt
     6601 attctagcgg catcatcatt aaaacaagcg gctgaattag cggtaaaatc tgcaaattag
     6661 gaggaaaaat gtcgatttta attgataaaa acacaaaagt aatttgccaa ggtttcaccg
     6721 gcggacaagg tactttccac agcgaacaag cccttgctta tggcacacaa ttagtcggcg
     6781 gagtttcgcc gaataaaggt ggcacaaccc atttaggctt accggttttc aacaccgtac
     6841 gcgaagcggt agaagcaacc ggtgcaactg caaccgttat ctacgttccg gctcccggct
     6901 gtaaagatgc tattttagaa gccattgatg ccggcatcca actaattgtc tgtattactg
     6961 aaggcattcc aaccttggat atgctacaag ttaaacaacg tctaaaccaa accggcgtgc
     7021 gaatgatcgg tccgaactgc ccgggtgtga ttacccctga tgagtgcaaa atcggcatta
     7081 tgccgggcaa tatccacaaa aaaggcaata tcggtattgt ttctcgttcg ggtactttaa
     7141 cctatgaagc agttaaacaa acaactgacg aaggctttgg tcaatctact tgtgtcggta
     7201 tcggtggtga tccgattccg ggatctaact ttattgacat tttaaaactg ttccaagacg
     7261 atcctgaaac tgaagcaatt gtgatgattg gtgaaatcgg cggctctgcc gaagaagaag
     7321 cggcagcttt catcaaagaa aatgtcacca agcctgtagt cagctatatt gccggtgtca
     7381 ccgcaccaaa aggcaaacga atgggacacg ccggtgcgat tatcagcggc ggcaaaggaa
     7441 ccgccgatga aaaattcaaa atccttgaag atgccggtgt gacaaccgtc agaagtttag
     7501 ccgaaatcgg ttcagctctt agaaaaattt taggctaaac taaaagttca agcagtcata
     7561 tttacccatt tttttgtaaa tatgaccgct tgtttttttg ctattaaatt actctttcga
     7621 tttccaaatt aatgggtcaa cacctttatg gataaggtct tgatgttctt caattctaaa
     7681 cactggctct ttgccacttt tcacttggcg aagatagtct tttaaaataa tccagacaat
     7741 cggagcaaga attaagatag ccaccaagtt aattaccgcc attgatgcca tcactgtatc
     7801 ggcaaatgcc catacaatcc ctccgtctct tactgcaccg aagtacacaa agaataaaac
     7861 gatggcacgg aatccccaca caaaccacgg actgttttta atgtagcgga tattagtttc
     7921 tgcataagca tagttaccga taatggatgt gaagcaaaac agtaaaatca caaatgctaa
     7981 aaagtgtaaa ccaaattcac ctaaatggaa ttgtaacgca ctttgagtaa gtgaaatacc
     8041 tcttaaagtt tcaccaccat agttatttga cataagaatg atcactgcag tacaagtaca
     8101 gactacaatt gtatctacaa atacgcccaa catttgaatt aagccttgac ttgccgggtg
     8161 tttcgcatca gaagtcgctg cagaatttgg tgcagatccc ataccagctt cgtttgagaa
     8221 taagccacgt ttaatcccca ttagcatagt tttggatacc aatgctccaa acgttccacc
     8281 tgcagcagca gaaaaatcaa aggcgctttc aataattaaa gagattatac ttggcacttt
     8341 ttcaatattc atacctaaaa taattactgc aataatcaag tagaataatg ccatcattgg
     8401 aacaacttgg gcagaaactt taccaatacg cttgacccct ccagaaataa ttaaccctgt
     8461 aatcaccact aatgtcatgc ctacgtagac tgggttccaa tcccacgcat ttttggttgc
     8521 ttccacaata gagttagatt gcacagcatt aaaagcaaaa ccaaaggtga agataagcgt
     8581 cactgcaaaa gcaatagcaa gagaaggcag ttttaaacca cgagtgatgt aataggctgg
     8641 cccaccacga aacattccgt ttggatcttt ggttttatac aactgagcca gtgaagactc
     8701 agcaaaggcg gaactcattc ccattaaggc ggtaatccac atccagaata ccgcacccgg
     8761 cccacccaaa gcgattgcag tagctacccc accaatatta ccaaccccaa cacggctggc
     8821 taatccagta gtaaaggctt ggaacggagt taatgatttc ccttccgtag aacgtcctcc
     8881 ccacatttca cgtaaacttt gcggaagaag acgcagctgg acaaaacctg ttgtaagagt
     8941 gaaaaataac cctgcaccga gcaataggat aatcgttaca tcccaaagtg gaccgtcgat
     9001 tgtgttcaca atccaagtca gtacactctc aaaaaataga ataattgaat ccataaagac
     9061 ctcttaattg aaaataaaac ttccacattg taaccgattt aatattttta aaaagttttt
     9121 ttaatacttt taataaaaat ttttaataac ttattaattt agcgtttgaa aaaaacgcct
     9181 gtaccagcat caatgaaact actgtgaaat aataccattc caaatagaat taatgcgagt
     9241 ccaagtgtaa attttaatat ccaaacgata tttcgattaa tttgagctga aaaataccat
     9301 tggctaacct taactgcctt atttctcgca atgataacaa gataagcaaa taagcttaaa
     9361 gtcagccctg ttcctactgc catagctaat gctgaaataa ccccccaagc atagagattg
     9421 agcgtataag aaagaaataa aacaagaata gcgccagagc aaggtcttga gccaatactt
     9481 aataccaaca tcagctgtgc tttccaatct ctcacttgtt gcatttcatt tgaagtcggt
     9541 aaatgtttat gcctacagct acaattttcg gtatgaatat gccctttctg cgtgacaagc
     9601 ggtaattttc cagctttttt ttgcgaaata cgaatggatt taatgatagg ctttcgcgct
     9661 ctgttcaccg ttcgatacac ctggtaacac cagtaaatgc cgaacaagat catcaaacca
     9721 aagctccccc gctcaaccca ttttagggtt aaattaaaat attggcgaga gagagtaaaa
     9781 atcaccacaa tcaccgtcac caatgaaatt gccactaagc cctgcaccaa tgctgaggca
     9841 aaagtgattt tcatcgcctg atttaatttt gttttttcaa aagaaagata actgctcaga
     9901 ataaattttc cgtgaccagg cccaactgcg tgaaatactc catataaaaa actaataaat
     9961 actaaggtaa taccggcttt actttgattt tcagctaatt cattgagcga agcggaaagc
    10021 tgtaaattaa agtttttttg ccattccatc actttaaaca atatcattgg ataaagctga
    10081 taaagagcaa ataggctcaa aaatcctatc actatcattc cccaatatgt tgcttttaat
    10141 cgcatataat ctccactttt tgagcaaatt gggcaccaag agagtaatct ccattttcag
    10201 gcatatccag tgattggttt ttatccaaac cggaagcata taagcgtaac ttactatcta
    10261 cttgaggttg caccaatgtt gctttacaac ttgcattact ggtattgaca tcagcagggc
    10321 gattatattc catcgcaata taataactcg gttcataagt atagaatctc actttactct
    10381 gctttaattc gtgaggttta gctaaatgaa aagtaatata aaaaatcact ctgttattct
    10441 tgatttcaaa gcgagtcgct gtgggctttg tcgtaaattt tatcggctga ttttgactat
    10501 catataaggt gctaaaataa tgattttgca atgcggtttg caccatttct gcagtgatat
    10561 tctgctgagt tttttcttta tcttggctat ttttcacttc ataaattaac tcagaagaag
    10621 caatttcatc tagcatccat tccatttgga aagatttcaa cattgagcct tccacaataa
    10681 cattcgtttt caaatcaaca aatgaatgtg ggtgagaaaa aactggcatt gaatataatg
    10741 caattaacgt gataatcgtc ttaataaatt tcatatttac tttcactata aaataaaaaa
    10801 gcgaacaagt tccccctgtt cgcatttcaa gaatttagtg agttggtcga taagccgagt
    10861 tctgtcgtgg acaatcattc ctctagacgt acatttacac atacgctcaa gcaacctacc
    10921 cgaactctca gcgggccacc gattgagttc ctatttggtc ttgctacgag tggagtttac
    10981 cctgctgtgg aatgttacca cccacacggt gcgctcttac cgcacccttt cacccttacc
    11041 gacaaagccg gcggtctgct ctctgttgca ctggtcgtag gctcacgccc cccggacgtt
    11101 atccggcact ctgccctgtg tagctcggac tttcctctcg tttacttgtc ccccagttta
    11161 cgttttcacg aatttagagg cttcaataaa ccagcgattg cctaaccaac tcagcactag
    11221 agtataatgc tttcgcaaaa aattgcaagg aaataaccgc ttgtagttat tatggcaaaa
    11281 taaaaaagga ttaagttcat ttaaaaactt aatcctcttc gctttaattc actcgtaaaa
    11341 attacgcacg tttgaagtct aagtgaacta attttggttt ctctatttta ttacaataat
    11401 ttcaaagggt tatttaatca atttcctttc tatttccgaa actatataca tttttccgaa
    11461 actcaaattt taatcagatt ataaaacaag ctattttcct tttttctcat tccaaaaata
    11521 ccatccaaaa catcttaccg ccaaccaagt gctccacgca aaaataggtc tattttgcgc
    11581 aatcaaacaa tcccttaacc gcttatctgc ttccgctcta ctgacttttc cgtttacgcc
    11641 cacgatcgtg ttgatgacag cacgaattaa
//
LOCUS       DANLZQ010000087        11498 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.087, whole genome shotgun sequence.
ACCESSION   DANLZQ010000087 DANLZQ010000000
VERSION     DANLZQ010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11498)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11498)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11498
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.087"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(76..1671)
                     /locus_tag="PXE50_001970"
     CDS             complement(76..1671)
                     /locus_tag="PXE50_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5622844.1"
                     /translation="MRLSQLSLSVLLLSASSLVAAAPVNTLINCVATPPMKLSPAITN
                     DANDFNASSQQIYNRLLAFKAGELTVEPSLAERWEISDDGLSYTFHLRKDVKFHSNKQ
                     FTPTRTLNADDVVFSFQRQMDLNHPYHKVSDGTYFYYHWMNLPKILKTVEKVDDYTVK
                     ITLQQPNAPFLTTLAMDFLSIYSKEYADKLLAEGKPELLDQAPIGTGPFVFQAYQTDQ
                     AVRYVANPDYFQGKAKFEKLIFSITPDAGTRYAKLKAGECDVIDFPNISDIAQMKQDP
                     KVNLLQRDGLNLAYIGLNSTKPALNNAKVRQALHYATDKKAIVEAVYQGGGTVASNPF
                     PDSVLGYNPNLPQYEFNLEKAKALLTEAGFADGFETEIWVQPVVRPSNPNPRRTAEII
                     QADWAKIGVKAKLVTHEWADFNKRTREGEFSTGTYGWTSRNGDPDNFLFPLLSKSNIP
                     GTNYGRWTDEKFEQLLAQAVQTQNRDERAKLYQQAVEIANEQTPFIPLAHAINYVPLS
                     KRVQGFVQNPFGYTPFYGVSLSE"
     gene            1820..2260
                     /gene="mioC"
                     /locus_tag="PXE50_001971"
     CDS             1820..2260
                     /gene="mioC"
                     /locus_tag="PXE50_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding protein MioC"
                     /protein_id="HDL5622845.1"
                     /translation="MTSICIITGSTLGGAEYVADHINEVLSEQGFEVELFNQATLADI
                     EGKTNLIIVTSTHGAGELPENIQQLFDDLANSSADFSSMKFGVIGLGSSDYDTFCNAV
                     NIVEEALKAKGASQVCESLRIDVMNNFDHDGSAEEWLPSFVEQL"
     gene            2272..2439
                     /locus_tag="PXE50_001972"
     CDS             2272..2439
                     /locus_tag="PXE50_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1232 domain-containing protein"
                     /protein_id="HDL5622846.1"
                     /translation="MNKISANKAKWIKIAIILIYMFSPVDILPEAILGPFGLVDDAAA
                     LMLLIKTILEK"
     gene            complement(2528..3001)
                     /gene="asnC"
                     /locus_tag="PXE50_001973"
     CDS             complement(2528..3001)
                     /gene="asnC"
                     /locus_tag="PXE50_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator AsnC"
                     /protein_id="HDL5622847.1"
                     /translation="MYSKNTTKSEIDKLDQKILRWLIKDARTPYAEMAKVFGVSAATI
                     HVRVEKMRQAGIIESTKIVVDERKVGYDVCCFIGIILKSAKDYDKVIAKLSEFNEVVE
                     AYYTTGNYSIFIKVMTHTIEELHSVLAGKIQSIDEIQSTETLISLQNPISRDILP"
     gene            3202..4194
                     /locus_tag="PXE50_001974"
     CDS             3202..4194
                     /locus_tag="PXE50_001974"
                     /EC_number="6.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015701738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--ammonia ligase"
                     /protein_id="HDL5622848.1"
                     /translation="MKKSFILQQQEISFVKNTFTQYLIDKLGIIEVQGPILSEVGNGM
                     QDNLSGIEKAVKVNVKCIPSATYEVVHSLAKWKRHTLARFGFKEGEGLFVHMKALRPD
                     EDSLDRTHSVYVDQWDWEKVIPEGRRNFDFLKETVNEIYKAIRLTELAVEARFDIPSV
                     LPKQITFVHSEDLVQRYPNMTSKERENAICKECGAVFLIGIGGKLSDGKPHDGRAPDY
                     DDWTTESEQGYKGLNGDILVWNEELGTAFELSSMGIRVDETALRLQVALTGDEDRLEM
                     DWHKDLLAGRLPLSIGGGIGQSRLVMFLLRKKHIGEVQSSVWPKAVFEEFENIL"
     gene            complement(4318..4737)
                     /gene="atpC"
                     /locus_tag="PXE50_001975"
     CDS             complement(4318..4737)
                     /gene="atpC"
                     /locus_tag="PXE50_001975"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HDL5622849.1"
                     /translation="MASQFELTVVSAERKIFEGTVTSVRVSGTDGELGVYAGHAPLLT
                     AIKPGMVKFTLADGKEEFIYVSGGFLEVQPTVVTVLADTAIRGEELDEQRILAAKRKV
                     EETLSKTSDADMTAKLAREIAKLRVYELTKTKLANKR"
     gene            complement(4765..6138)
                     /gene="atpD"
                     /locus_tag="PXE50_001976"
     CDS             complement(4765..6138)
                     /gene="atpD"
                     /locus_tag="PXE50_001976"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011978979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HDL5622850.1"
                     /translation="MATGKIVQIIGAVIDVEFPQDAVPKVYDALKVESGLTLEVQQQL
                     GGGVVRCIALGSSDGLKRGLKVENTNKAIEVPVGTKTLGRIMNVLGEPIDEAGPIGEE
                     ERWTIHRAAPSYEEQANSTELLETGIKVIDLVAPFAKGGKVGLFGGAGVGKTVNMMEL
                     IRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVA
                     LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVL
                     QERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDP
                     LDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILGMDELSEDDKRLVARAR
                     KIERFLSQPFHVAEVFNGVPGKFVPLKETIRGFKGILEGEYDHIPEQAFYMAGSIDEV
                     VERAKQM"
     gene            complement(6159..7025)
                     /gene="atpG"
                     /locus_tag="PXE50_001977"
     CDS             complement(6159..7025)
                     /gene="atpG"
                     /locus_tag="PXE50_001977"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011201492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HDL5622851.1"
                     /translation="MAGAKEIRTKIASVRNTQKITKAMEMVAASKMRKTQERMAASRP
                     YAESIRKAISHIAKGNIEYKHPFLTPRPVKKVGYLVVSTDRGLCGGLNINLFKTVLHE
                     LKEKDDQGVKSRLAVVGNKGISFFNPMGLEIKGHINGLGDTPAMEDLVGIVNGMVNAY
                     REGEIDEVYVVYNRFINTMSQKPTVQQLLPLPALENDSLEQTGSWDYLYEPNPQALLD
                     SLLVRYLESQVYQAVVDNLASEQAARMVAMKAATDNAGNLINELQLVYNKARQASITN
                     ELNEIVAGAAAI"
     gene            complement(7051..8592)
                     /gene="atpA"
                     /locus_tag="PXE50_001978"
     CDS             complement(7051..8592)
                     /gene="atpA"
                     /locus_tag="PXE50_001978"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001176751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HDL5622852.1"
                     /translation="MQLNSTEISELIKKRIAQFNVVSEAQSTGTIVSVSDGVIRIHGL
                     SDVMQGEMIALPGNRYAIALNLERDSVGAVVMGPYADLAEGMQVQCTGRILEVPVGRG
                     LLGRVVNTLGQPIDGKGEIQNDGFSPIEVIAPGVIDRQSVDQPVQTGYKAVDSMVPIG
                     RGQRELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTIANVVRKLEEHGAL
                     ANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLL
                     LRRPPGREAFPGDVFYLHSRLLERASRVNADYVERFTNGAVKGQTGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLESGLFNAGIRPAVNPGISVSRVGGSAQTKLVKKLAGG
                     IRTALAQYRELAAFAQFASDLDEATRKQLSHGQKVTELLKQKQFEPMSVAQLGLSLAA
                     AEYGYLDDIPVERVGSFEANLLAYAQSNYGEFMQELSKSGNFNDEIKDKLNEILSGFK
                     KNSAW"
     gene            complement(8605..9138)
                     /gene="atpH"
                     /locus_tag="PXE50_001979"
     CDS             complement(8605..9138)
                     /gene="atpH"
                     /locus_tag="PXE50_001979"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HDL5622853.1"
                     /translation="MSELSTVARPYAKAAFDFALEQGQLEQWQQMLTFSAAVANDEQV
                     ASFLNSSLASGQISETFIKICGEQLDQYGQNFIRVMADNKRLAVLPAVLNAFLELRAE
                     QESIKDVEVVSADKLTDAQEAKIANAMEKRLGTKVRITSSIDSSLIAGVIIRYDDVVI
                     DGSSRGQLNRLSQELSL"
     gene            complement(9152..9622)
                     /gene="atpF"
                     /locus_tag="PXE50_001980"
     CDS             complement(9152..9622)
                     /gene="atpF"
                     /locus_tag="PXE50_001980"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HDL5622854.1"
                     /translation="MNLNATLIGQLIAFALFVAFCMKFVWPPLIRVIEERQANIASAL
                     ASAEKAKQEQADSKAAADQEILRAKEEAQNIIDLATKRRNEILESVQAEAEVERQRII
                     EQGYAEVESERKRVQEELRQKVAALAIAGAEKIVGRSVDAAANNDIIDKLVAEL"
     gene            complement(9683..9937)
                     /gene="atpE"
                     /locus_tag="PXE50_001981"
     CDS             complement(9683..9937)
                     /gene="atpE"
                     /locus_tag="PXE50_001981"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HDL5622855.1"
                     /translation="MESVITATIIGASILLAFAALGTAIGFAILGGKFLESSARQPEL
                     ASSLQTKMFIVAGLLDAIAMIAVGISLLFIFANPFIDLLK"
     gene            complement(10055..10843)
                     /gene="atpB"
                     /locus_tag="PXE50_001982"
     CDS             complement(10055..10843)
                     /gene="atpB"
                     /locus_tag="PXE50_001982"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HDL5622856.1"
                     /translation="MAGTTAEYISHHLSFLSTGEGFWAVHLDTLFFSLVAGAIFLWVF
                     SRVAKNATTGVPGKLQCFVEIVIEWVNGLVKDNFHGPRNVIAPLALTIFCWVFIMNAI
                     DLIPVDFLPQLANLFGIHYLRAVPTADISATLGMSICVFALILFYTVKSKGFGGLVKE
                     YTLHPFNHWAFIPVNFILETVTLLAKPISLAFRLFGNMYAGELIFILIAVMYMADNFA
                     LQALGIPLHLVWAIFHILVITLQAFIFMMLTIVYLSIAYNKADH"
     gene            complement(10866..11249)
                     /locus_tag="PXE50_001983"
     CDS             complement(10866..11249)
                     /locus_tag="PXE50_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase subunit I"
                     /protein_id="HDL5622857.1"
                     /translation="MSAVINRAKSQYKQALKVEFFLLCVFALGVSLWKMNFNFSFLGG
                     ALASFLPHLVFVYWVFFKKSAKNQSKMTAFYRGEGMKWLVTIILVIGCFKLIPALDVV
                     LFFVGYFIALFLNNMIPFVLSKHHH"
BASE COUNT         3442 a         2512 c         2155 g         3389 t
ORIGIN      
        1 ttctaaaaga aaagcagtct attctctacc acattttgca aaaaagtggc aaaaatagac
       61 cgcttgtatg gcatatcact ccgataaact caccccataa aatggcgtgt agccaaacgg
      121 attttgcaca aaaccttgca cccgtttgct gagtggtaca taattgatag cgtgagccag
      181 cggaataaat ggcgtttgtt cgttggcaat ttccaccgct tgttgataga gcttcgcccg
      241 ctcgtcacgg ttttgggttt gtacagcttg agctaataac tgctcaaatt tctcatccgt
      301 ccaacgccca taatttgttc ccggaatatt agatttgctt aataaaggga agaggaaatt
      361 atcaggatca ccattacggc ttgtccaacc ataagtgccg gtagagaact cgccttcacg
      421 ggtgcgtttg ttaaaatccg cccattcgtg ggtcactaat ttcgctttca ccccgatttt
      481 cgcccaatcc gcctgaataa tttcagccgt tcgacgtggg tttgggttag aagggcgcac
      541 taccggttgt acccaaattt ccgtttcaaa tccatcggca aagccggctt ctgttaatag
      601 ggctttggct ttttcaaggt taaattcata ttgcggtaaa tttggattat agcccaacac
      661 cgaatcaggg aacggattac ttgccaccgt gccaccgcct tgataaacag cctcgacaat
      721 cgctttctta tcggttgcat aatgcaaggc ttggcgaact ttggcgttat ttaatgccgg
      781 tttggtgctg tttaagccga tataagctaa attcagcccg tctctctgta acaaattcac
      841 cttcggatct tgtttcattt gggcaatatc ggaaatattc gggaaatcaa tcacatcgca
      901 ttcacccgct ttcagtttgg cataacgagt gcccgcatca ggggtaatac taaaaatcag
      961 tttctcaaat tttgctttac cttggaaata atccgggttc gcaacataac gcaccgcttg
     1021 atcggtttga taggcttgga acacaaaagg ccctgtgccg atcggggctt gatccaataa
     1081 ctccggcttg ccttccgcca gcaatttatc cgcatattct tttgaataaa tcgacaagaa
     1141 atccatcgct aaggttgtca gaaaaggagc attaggttgc tgtaaggtga ttttaacagt
     1201 gtaatcgtcc actttttcca ctgtttttaa aatcttcggc aaattcatcc aatggtaata
     1261 gaaataagta ccgtcagaga ccttatggta agggtggttt aaatccatct ggcgttggaa
     1321 cgagaacact acatcatccg cattcagcgt tcgagttggc gtaaattgtt tattggaatg
     1381 aaatttcacg tctttacgta aatggaatgt gtaacttaag ccatcgtcac tgatttccca
     1441 acgttccgcc aaactcggct caaccgttag ttcaccggct ttaaacgcta ataagcgatt
     1501 ataaatttgt tgtgaactgg cgttgaaatc attggcatca ttagtaattg caggactaag
     1561 tttcatcggt ggagttgcca cgcaattaat caacgtattt accggagctg ctgccaccaa
     1621 actgctggca cttaagagta aaacagaaag agataattga gaaagacgca taaagactcc
     1681 ttaacatttt ctactaactt actcggcatt aacgtatttt caaaataact aaaggttata
     1741 atttataatc agaataatca gttgcaaacc aatgattctt ggctagaata ttggcagttt
     1801 tttaaacgag agatttacta tgacatcaat ttgtatcatc accggcagca ccttaggcgg
     1861 tgcggaatat gttgccgatc acattaatga ggtattaagc gaacaaggtt ttgaagtgga
     1921 actgtttaac caagccaccc ttgccgatat tgagggcaaa accaatctga ttatcgttac
     1981 ctctacccac ggagccggcg agttacccga aaatatccaa cagctatttg acgatttagc
     2041 aaatagctcg gctgatttca gcagtatgaa atttggtgta atcggtttag gtagctccga
     2101 ctatgacacc ttctgcaatg cagtaaatat tgttgaagaa gctctcaaag cgaaaggggc
     2161 aagccaagtt tgcgaatcac tgagaattga tgtaatgaat aatttcgacc acgatggcag
     2221 tgctgaagaa tggttaccat catttgttga acaattataa cttaagtatc aatgaacaaa
     2281 atcagtgcaa ataaggcaaa gtggattaaa atcgctatta tcttaatcta tatgttcagc
     2341 cctgtagata ttctacccga agcgatttta ggcccattcg gtttggttga tgatgccgcc
     2401 gcattaatgc tattgattaa gactattttg gaaaaatagg catagtagac aaaatagttg
     2461 caaaaaacca aaacaaaacg accgcttgta acccaataca agtggtctta tcttttactt
     2521 aattctttta agggagaata tctcttgaaa taggattttg aagtgaaata agcgtttctg
     2581 ttgactgaat ttcatcaata gactgaattt ttcctgctaa taccgaatgc aactcttcga
     2641 tggtatgggt cattacttta ataaaaatag aataattacc agtggtatag tacgcctcaa
     2701 caacttcatt aaattcacta agtttagcaa ttactttatc ataatctttg gctgatttta
     2761 aaataatgcc aataaagcaa cacacgtcat acccaacctt acgctcgtcc actacgattt
     2821 tggtagattc aataatgccg gcttggcgca ttttttcaac acggacatgg atagttgcgg
     2881 cactcacacc aaaaactttt gccatttccg cataaggcgt gcgagcatct ttaattagcc
     2941 aacgtaaaat tttttgatcc agcttatcaa tttccgattt agtcgtgttt ttactgtaca
     3001 ttttttctcc tcaaaatcaa actaattaga taagatttaa aaatattgca aatattttaa
     3061 atgaaattta tcacaaatgc ttttttattt gataaatatt gcatttttta gatatttctt
     3121 taaattagca ctcatcaatt cttaaatgca atcaagcacg agaaataaaa aatcaacatt
     3181 ctttaattag gaaagcaaac aatgaaaaaa tcttttattt tacagcaaca agaaatcagt
     3241 tttgttaaga acacatttac tcaatattta attgataaat taggcattat tgaagttcag
     3301 gggcctattt tgagcgaagt cggcaacggt atgcaagaca acctttccgg tatcgaaaaa
     3361 gcagtaaaag taaacgtaaa atgtattcca agcgctactt atgaagtggt tcattctctt
     3421 gcaaaatgga aacgccacac cttagctcgt tttggattta aagaaggaga agggttattt
     3481 gttcatatga aagctcttcg ccctgatgaa gattctttag atcgcacaca ctcggtatat
     3541 gttgaccaat gggactggga aaaagtcatt cctgaaggtc gccgcaactt cgatttctta
     3601 aaagaaacgg taaacgaaat ctataaagca attcgtttaa ccgaattagc ggtggaggct
     3661 cgtttcgata ttccatctgt attgcctaaa caaattactt tcgttcacag cgaagactta
     3721 gtgcaacgct atccgaatat gaccagcaaa gagcgtgaaa atgctatctg taaagagtgc
     3781 ggagcggtgt tcttaatcgg tatcggcggc aaattatcag acggtaaacc tcacgatgga
     3841 cgagctccgg actatgatga ctggacaacc gagtccgaac aaggctacaa aggcttaaac
     3901 ggcgatattt tagtttggaa cgaagaactc ggcacagcct ttgaactttc ctcaatgggt
     3961 attcgtgtag atgaaaccgc cttacgctta caagttgctt taactggcga cgaagaccgc
     4021 ctcgaaatgg attggcacaa agatttatta gccggcagac tcccgctttc tatcggcggc
     4081 ggtatcggtc aatctcgctt agtgatgttc ttactacgca aaaaacacat cggtgaggtg
     4141 caatccagtg tctggccaaa agcggtattt gaagagtttg agaatattct ttaataaaac
     4201 aaaaaagcga accttagggt tcgcttttgc tttctacaag cggtcttatt ttgcaaaaaa
     4261 tttactgttt ttaaccgctt gtaaaacaaa accccacttt cgtggggttt tttgatatta
     4321 acgtttattc gctaatttgg ttttagtgag ttcgtaaaca cgcagtttcg caatttctct
     4381 cgctaacttc gcggtcatat ccgcatcgct ggtttttgaa agtgtttctt ctactttgcg
     4441 ttttgcggca agaatacgct gttcgtctag ttcttcacca cgaattgcgg tatcagccaa
     4501 cactgttact acggtcggtt gtacttcaag gaaaccacct gaaacgtaga taaactcttc
     4561 tttgccgtca gctaaagtga atttaaccat tcccggttta attgcggtta ataacggtgc
     4621 atgccctgca tacaccccta attcaccatc tgtccctgaa acacgcacgc tggtaactgt
     4681 gccttcaaag attttacgtt ctgcactcac taccgtgagt tcaaattgag atgccatgtt
     4741 gttctccttt agtttagaac aaaattacat ctgttttgct ctttcaacca cttcgtcaat
     4801 tgaacccgcc atatagaacg cttgttccgg aatatggtcg tattcgcctt ctaaaatgcc
     4861 tttaaagcca cgaattgttt cttttaacgg tacgaatttg cccggtacgc cgttgaatac
     4921 ttccgcaacg tggaatggtt gtgaaaggaa acgttcgatt ttacgcgcac gagcaacaag
     4981 gcgtttgtcg tcttccgata attcatccat acccaaaatt gcaatgatgt cttttaactc
     5041 tttataacgt tgtaatgtac cttgtacacc acgagcaacg ttatagtgtt cctcaccaac
     5101 cacgagtgga tctaactgac gagaggttga gtcaagaggg tcaaccgccg ggtaaatacc
     5161 gagtgaagcg atattacggc ttaataccac cgttgagtct aagtgggcaa aggtagttgc
     5221 cggagacggg tcagttaagt catccgccgg aacatatacc gcttgcacag aggtaataga
     5281 gccggttttg gttgaggtaa tacgctcctg taatacgccc atctcttctg caagagtcgg
     5341 ctgataacct accgcagacg gcatacgacc taataacgca gatacttcgg taccagctaa
     5401 agtataacgg tagatgttat ccacgaagaa taatacgtca cgaccttcat cacggaattt
     5461 ttctgccatg gttaagccgg ttaatgccac acgcagacgg ttgcccggtg gttcgttcat
     5521 ttgaccgtaa accagcgata ctttgtctaa tacgttagag tctttcattt cgtggtagaa
     5581 gtcattaccc tcacgagtac gctcacctac accggcgaat accgagtaac cgctatgttc
     5641 gatagcgatg ttacggatta actccatcat atttacggtt ttacctacac ccgcaccacc
     5701 gaataagcca actttaccac ccttagcaaa tggagcaact aagtcgataa ctttgatacc
     5761 ggtctctaaa agctcggtgc tgttcgcttg ttcttcgtag cttggtgctg cacggtggat
     5821 tgtccaacgt tcttcttcac cgattgggcc tgcttcatca attggctcac ctaatacgtt
     5881 cataatacga ccgagtgttt ttgtaccaac cggtacttca atcgctttat tcgtattttc
     5941 aacttttaag ccacgtttta aaccatcaga tgaaccaagt gcgatacaac ggaccacacc
     6001 gccacctaat tgttgttgaa cttcaagggt taatcctgat tcaactttta atgcatcata
     6061 aacttttggt actgcatctt gcggaaactc aacatcgatt accgcaccga tgatctgtac
     6121 aatttttccc gttgccatta ccgttcctct attcattgtt aaattgctgc ggcacccgcg
     6181 acaatttcat ttaattcatt cgtaatactt gcttgacgag ctttgttata cactaactgt
     6241 aactcattaa tcagattacc tgcgttatcg gttgctgctt tcattgccac cattcgagca
     6301 gcctgttcag acgcaagatt atctaccact gcctgataaa cttgagattc taaataacga
     6361 accagtaagc tgtctaataa cgcttgtgga tttggttcat agagataatc ccaagaacca
     6421 gtttgctcta atgagtcatt ttccagtgca ggcaaaggaa gcaactgttg tactgtcggt
     6481 ttttgtgaca tcgtgtttat aaaacggtta tataccacat acacttcatc aatttcgcct
     6541 tcacggtagg catttaccat accattaaca ataccgacta aatcttccat tgccggtgta
     6601 tcacccaatc cattgatatg acctttaatc tctagcccca ttgggttaaa aaaggagatc
     6661 cctttatttc ccaccacagc aagtcgagac ttaacacctt ggtcatcttt ttctttcaat
     6721 tcatgtaaaa cggttttaaa taaattgata tttaagccac cacataaacc gcgatcggtt
     6781 gaaactacta aatagccaac tttttttacc ggacgtgggg tcaaaaatgg gtgtttatac
     6841 tcaatgttac ctttggcaat atggctaatt gccttgcgaa tactttcagc ataagggcga
     6901 gaagccgcca tacgctcttg ggttttacgc atttttgatg cggcaaccat ttccatcgct
     6961 ttggtaattt tttgtgtatt acgaacactt gcaattttgg ttcttatctc tttagcacct
     7021 gccatattat ttctccgcta aaaagttaga ttaccaagca ctgttctttt tgaaaccaga
     7081 taaaatctcg ttcaatttat ctttaatttc atcgttgaaa ttgccggatt ttgacagttc
     7141 ttgcataaac tcgccgtagt tactttgagc ataagctaat aagtttgctt caaatgagcc
     7201 aacacgctca accggaatat catctaagta accgtattca gctgctgcta atgataaacc
     7261 taattgtgca acagacatcg gctcgaattg tttttgtttc aacaattcag ttactttttg
     7321 accgtgtgaa agctgtttac gtgttgcttc atcaagatct gatgcgaact gggcaaatgc
     7381 cgctaattca cggtattgag caagtgcggt acggatacca ccggcaagct tcttaaccag
     7441 tttagtttgt gcagaaccac ctacacggga aaccgagata cccgggttta ccgcagggcg
     7501 aataccggca ttgaataagc ctgattctaa gaaaatctga ccatcggtaa ttgaaattac
     7561 gttagtcggt acgaaggctg aaacgtcacc tgcttgggtt tcgatgatcg gtaatgcggt
     7621 taaagaaccg gtttgacctt tcacagcacc gttagtgaaa cgttctacat agtctgcatt
     7681 tacacgagac gcacgctcta ataagcgaga gtgtagatag aacacatcac ccgggaatgc
     7741 ttcacgaccc ggtggacggc gtaataacaa tgaaatttga cggtaagcaa ctgcttgctt
     7801 agacaaatca tcgtaaacga tcaacgcatc ttcaccacgg tcacggaagt attcacccat
     7861 tgcacaacct gcataaggtg caagatattg taatgcagca gattcagacg cagaagccac
     7921 tacaacgata gtgttcgcta atgcaccgtg ttcttctaat ttacgcacca cgttggcgat
     7981 agttgatgcc ttttgaccga ttgcaacgta gatacattta atgcctgaat cacgttggtt
     8041 gatgatcgca tcaatcgcta atgcggtttt accggtttga cggtcaccta taatcaattc
     8101 acgctgacca cgaccgattg gtaccattga gtccaccgct ttgtaaccgg tttgaaccgg
     8161 ttgatcaacc gattgacggt cgataacgcc cggtgcgatc acttcgattg gtgagaaacc
     8221 gtcattttgg atttcgcctt taccatcgat tggctgacct aaggtattta caacacgacc
     8281 taataagcca cgaccaaccg gcacttctaa aatacgaccg gtacattgta cttgcatacc
     8341 ttctgctaaa tcggcataag gtcccattac aactgcacca acagaatctc tttctaagtt
     8401 taatgcaatc gcataacgat tgcccggtaa tgcaatcatt tcaccttgca ttacatcaga
     8461 taagccgtgg atacgaataa ccccgtcact taccgaaacg attgtccctg tgctttgagc
     8521 ttcactcacc acattaaact gggcaatacg ttttttaatc aattcactaa tttcagttga
     8581 atttagttgc attttttatt cctcttacaa gctcaactct tgactcaagc ggtttagctg
     8641 tccacgacta ctaccatcaa tcactacatc atcataacga atgatcacac ccgcaattaa
     8701 tgaactatct attgatgaag taatacgtac tttcgttccg agtcgctttt ccatcgcatt
     8761 ggcaattttt gcttcttgtg catctgttaa tttatctgca gaaacaacct caacatcttt
     8821 aattgattcc tgttctgctc ttaattctaa aaatgcattc aataccgcag gtaatactgc
     8881 taaacgcttg ttatcagcca ttacgcgaat gaaattttgc ccatattgat ctaattgttc
     8941 gccacaaatc ttgataaacg tctcagaaat ctgaccgctt gcaagtgatg agttaagaaa
     9001 actagctact tgctcatcgt tagcgacggc ggcagaaaaa gttaacatct gctgccattg
     9061 ttccaattga ccttgttcta aagcaaaatc gaaagccgct ttagcatagg ggcgagctac
     9121 tgtgcttaat tctgacatct gcccctccta gttatagttc cgcaactagc ttatcaataa
     9181 tatcgttgtt cgcagcggca tccaccgaac gacccacgat tttttctgca ccagcaatag
     9241 ccaatgcagc cactttttga cgaagctctt cttgaacgcg tttacgttcg ctttcaactt
     9301 ccgcgtaacc ctgttcaata atacgttgac gttccacttc agcttctgct tgtacagatt
     9361 ctaaaatttc attacgacgt tttgttgcta aatcaatgat attttgtgct tcttctttcg
     9421 ctctaaggat ttcttgatcc gcagccgctt tagaatcagc ttgttcttgt ttcgcttttt
     9481 cggcagaagc caatgcgcta gcaatatttg cctgacgctc ttctatcact cgaattagcg
     9541 gtggccatac aaacttcata cagaacgcaa caaaaagtgc gaacgcaatc agttgaccaa
     9601 ttagtgttgc atttaaattc acaacgccct cctaaaagcc ggtaaagtta ttcaactgaa
     9661 taacggttaa tcaaatcccg acttatttca ataaatcaat gaacgggttt gcgaagatga
     9721 atagtaatga aatacctaca gcgatcattg cgatagcatc taaaagacca gcaacgataa
     9781 acattttagt ttgtaagctt gatgctaatt ccggctgacg tgcagatgac tctaagaatt
     9841 tgccacctaa gatagcaaag ccgatagcag taccaagagc agcgaaagct aataaaattg
     9901 aagcaccaat aattgttgct gtgattactg attccataat gttctccatt agattgagga
     9961 attagcccga aggctgggtt gttgataaaa atacatatca agcggtcaat attttgcaaa
    10021 aatttgcgaa aaacctaccg cttgtaaggc tagtttaatg atccgctttg ttataagcga
    10081 tactcaaata aacaatcgtt agcatcataa aaataaaggc ttgaagcgta ataactaaaa
    10141 tatggaaaat cgcccaaacc aagtgtaatg gaatccccaa cgcctgtaga gcgaagttgt
    10201 ctgccatata cattactgca ataaggataa agattaactc acctgcatac atattaccga
    10261 ataaacggaa cgccaatgaa atcggttttg ccaaaagcgt taccgtttca agaataaagt
    10321 ttaccggaat gaatgcccag tggttaaacg ggtgtaacgt gtattctttc actaaaccgc
    10381 caaaaccttt cgatttcacc gtgtaaaata aaattaacgc aaatacacaa atagacatac
    10441 ccagtgttgc actaatatct gccgttggta ctgcacgcaa atagtgaata ccaaacagat
    10501 tggctaactg tggtaagaaa tcgaccggga taaggtcgat cgcattcata ataaacaccc
    10561 aacagaaaat cgttaatgct aatggtgcaa ttacattgcg aggtccgtgg aagttatcct
    10621 tcactaaacc gtttacccac tcaataacaa tctcaacaaa acattgcaat tttcccggaa
    10681 cgcccgttgt tgcatttttt gctacacgcg agaacaccca taaaaaaatc gcacctgcca
    10741 ctaaagagaa gaacagtgta tctaaatgca ctgcccaaaa gccttcacct gtcgataaaa
    10801 aactcaagtg atggctaata tattctgctg tcgttccagc cataacatat ccttttaaat
    10861 taaaattagt ggtgatgttt gcttaataca aacgggatca tattatttaa aaataatgcg
    10921 ataaaataac ccacgaaaaa caacacaaca tctagagcag ggataagttt aaaacagccg
    10981 atcaccaaaa taatagtaac caaccatttc attccttcac cacgatagaa agcggtcatt
    11041 tttgactgat tttttgcaga tttcttaaag aaaacccaat atacaaacac aagatgaggc
    11101 aaaaaactcg ctaaagcacc gcctagaaag gaaaaattaa aattcatttt ccataaagac
    11161 actccaagtg caaaaacgca caagagaaaa aattcaacct ttaatgcttg tttatattgt
    11221 gattttgctc tattgattac agctgacaca ttttatcctt tttgaataag taaaccacac
    11281 aatcaggcta ataattagcc actgttgaat caaagaaaat ccgtgctaaa ttatacttta
    11341 caaatgaatt gttgcaaccg aaaagcgaca caaaaacttg ttattcttca catttttgaa
    11401 aaaaaatttt atttacgttg catttttttg agtaaaacca tcaaaatcag ttaacaaaaa
    11461 aacaacaaat agaggtgtgt gtatttttct ctgtcaca
//
LOCUS       DANLZQ010000088        11370 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.088, whole genome shotgun sequence.
ACCESSION   DANLZQ010000088 DANLZQ010000000
VERSION     DANLZQ010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11370)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11370)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11370
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.088"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            339..1883
                     /gene="leuA"
                     /locus_tag="PXE50_001984"
     CDS             339..1883
                     /gene="leuA"
                     /locus_tag="PXE50_001984"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HDL5622858.1"
                     /translation="MSNNNIIIFDTTLRDGEQSLKASLTVKEKLQIALALERLGVDVM
                     EVGFPVSSAGDFESVQTIARHIKNSRVAALSRAVAKDIDAAYEALKVAEAFRIHTFIA
                     SSALHVEAKLKRSFDDVVEMAVAAVKRARNYTDDVEFSCEDAGRTGIDNICRIVEAAI
                     NAGATTVNIPDTVGFCLPNEYGNIIHQVMNRVPNIDKAIVSVHCHNDLGMATANSLTA
                     VQNGARQIECTINGIGERAGNTALEEVVMAIKTRQEFMGVDTRINTQEIHRVSQMVSQ
                     LCNMPIQPNKAIVGSNAFAHSSGIHQDGMLKNKNTYEIMSPETIGLKKEKLNLTARSG
                     RAAVKGHMADMGYTETDYDLDKLYEAFLQLADKKGQVFDYDLEALAFIDMQQGDEDRL
                     KLDVITTQLISGLPASAFVQVELDGVRQSATSQGGNGPVEATYNAIMNIVGMELKMSH
                     YNLTAKGEGAEALGQVDIVVEYEGRKFHGVGLATDIVESSARALIHAINAIYRSQKVA
                     DLKAKK"
     gene            2105..2677
                     /gene="rpoE"
                     /locus_tag="PXE50_001985"
     CDS             2105..2677
                     /gene="rpoE"
                     /locus_tag="PXE50_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000003307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoE"
                     /protein_id="HDL5622859.1"
                     /translation="MSEQITDQELVEKAQKGDKKAFNLLVVRYQNRVAGLLTRYVARD
                     DIPDIVQESFIKAYRSLESFRGESAFYTWLYRIAVNTAKNHLTSLGRRPPKEDILAED
                     AESYDVGAQLRESDTPENLILSEELKKVVFDTIENLPDELKTAIRLRELEGLSYEEIA
                     EVMECPVGTVRSRIFRAREAIDAKIKPLMQ"
     gene            2723..3346
                     /locus_tag="PXE50_001986"
     CDS             2723..3346
                     /locus_tag="PXE50_001986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL5622860.1"
                     /translation="MQERITQQNERLSAYMDGQNVDTAFVETLTNSPELQQKWASYHT
                     IRSVMQGDEIILGRDFSAKMEALLENEEIESQANVEKPKGLLLKLKRWGTPIMQAGIA
                     ASVCLVAVLGVNSMNASDEIAQTQQPVLQTLPFSNSVEAVSYNAPVQDQPTEEQLELQ
                     QRKINALLENHELQRRTNNVKNLTLSEEEKQKAQTSSNTESEPNIQK"
     gene            3504..4487
                     /locus_tag="PXE50_001987"
     CDS             3504..4487
                     /locus_tag="PXE50_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucB/RseB C-terminal domain-containing protein"
                     /protein_id="HDL5622861.1"
                     /translation="MLFKIKKYLLLFWVISACYTFAWAESTIKTPLAYLTAMSEAHKK
                     STYELVYILQQGSDTESFRLRHAFTHNKEYAQLLNLDHSREEIILKNNKVSYLGYNFR
                     PFSLNSSQILDNLPNVLYTDYANLKGYAFLDAGKDRISDRITKVIRMKPNDTLRYAYI
                     LWIDEETHLLLKSQVLNMDNLVLEEFRVLQLYQSPELDRIANVIESLMLPTLTTVKKE
                     EFPKSDGWQVKWLPTGFRLIQQQTVTGATYQVESEYVDSRVYSDGLSTLTIYIMPSQG
                     VSFNEYAWQQGKLTILNQTINDRDIVIIGDVPLQSAKQIMNNIGFKEGAQP"
     gene            4484..4948
                     /locus_tag="PXE50_001988"
     CDS             4484..4948
                     /locus_tag="PXE50_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SoxR reducing system RseC family protein"
                     /protein_id="HDL5622862.1"
                     /translation="MMIEQATVVEYQNGVAIVQCYAKSSCGGCVAQSACGSKALSALA
                     GEKIDPRFRIEVDEPLKVGDKVELGLAENILLKSVFLIYGIPLLVLVMTAVGFSQFFA
                     NELIVLFIMLLSTGITFWAVRKLIHKHSKQANFSPIFLGKVLGDYNGKNMAK"
     gene            4926..6611
                     /gene="fadD"
                     /locus_tag="PXE50_001989"
     CDS             4926..6611
                     /gene="fadD"
                     /locus_tag="PXE50_001989"
                     /EC_number="6.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain-fatty-acid--CoA ligase FadD"
                     /protein_id="HDL5622863.1"
                     /translation="MEKIWLNNYPPYSPKTIETDQYESLVEMFEAAIQRHPDIPAYIN
                     MGQVLTFRKLEERSRSFAAYLQNELRLKKGDRIALMMPNLLQYPIALFGALRAGLVVV
                     NVNPLYTPRELEHQLNDSGAKAIVIVSNFAATLEKIVFNTEIKHVILTRMGDQLSFGK
                     RTLVNFVVKYIKKLVPKYKLPHAVSFREALSIGKQRQYVKPNIVSQDLAFLQYTGGTT
                     GVAKGAMLTHQNLIANMMQAKWIVEPLLGNSANMIGLVPLPLYHVLALSMNCLLFIEL
                     GLTGLLITNPRDIPGFIKELKKYKVSVITGVNTLFNALLNHESFKEVDFSHLKLSVGG
                     GAAIQSSVAKRWHDLTGVHIIEGYGMTECSPLISATRGDSVEYSGSIGVPVPNTDIRI
                     VDDEGKEVPLGERGELVVKGPQVMQGYWNRPDETAQVLQDGWMATGDIVVMGDDLNLR
                     IVDRKKDMIIVSGFNVYPTEIEEVISQNPKVNEVVAIGVPSEASGESIKIFVTKKDES
                     LTRDELRTYCRQFLTGYKIPRDIEFRDELPKSNVGKILRRVLRDEELAKVNKA"
     gene            6636..7265
                     /gene="upp"
                     /locus_tag="PXE50_001990"
     CDS             6636..7265
                     /gene="upp"
                     /locus_tag="PXE50_001990"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001295473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HDL5622864.1"
                     /translation="MKIVEVKHPLVKHKLGLMREAEISTKDFRELANEIGSLLTYEAT
                     KDLEMESVEINGWSGEKIAVERIKGKKVTVVPILRAGLGMMDGVLEHIPSARISVVGI
                     YRDEETLKPVPYFSKLANDVDERLAIITDPMLATGGSMVATIDLLKKAGCKQIKVLVL
                     VAAPEGIKVLEAAHPDVELYTASIDSHLNENGYIIPGLGDAGDKIFGTK"
     gene            complement(7376..8242)
                     /gene="rsmA"
                     /locus_tag="PXE50_001991"
     CDS             complement(7376..8242)
                     /gene="rsmA"
                     /locus_tag="PXE50_001991"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HDL5622865.1"
                     /translation="MSSTNSKKHLGHTARKRFGQNFLHDMNIIHSIVSAINPKNGQFL
                     LEIGPGLGALTEPVAELVDKLTVVEIDRDLAERLRHHPFLNQKLTIIEQDALRFNFRD
                     YFNQLNLDEDSVRVFGNLPYNISTPLIFHLLTFHDLIQDMHFMLQKEVVKRLCAAPNS
                     KAYGRLTIMAQYYCQVIPVLEVPPTAFKPAPKVDSAVVRLVPYNQLPYPAKDVYWLNR
                     VTTQAFNQRRKTLRNALSTLFSAEQLDALGVDLTARAENLTIADYVRLANWLHDNPPA
                     IDTTEELVDEDC"
     gene            complement(8304..9254)
                     /locus_tag="PXE50_001992"
     CDS             complement(8304..9254)
                     /locus_tag="PXE50_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDL5622866.1"
                     /translation="MKMKLVKSLFAVAVATMSLTQTAHAFEERVVALVNDTPIMQSQV
                     QRVLGKKKATETAQRAAIDQVIDDMLVQQAMKEAGVKVSPAAVNQAVENVAIQNGITY
                     GQLLDALDYQGITLEQFKRNIAQQMAMEQVRHISISKSIQVAPQQVQALAKELMAKDK
                     AAGKLKTVSGKEHRISHILLKTNPILNDAQAKAKLSSLTTDINSGKISFEEAAKTHSV
                     DYASGADGGDLGFNFLEIYDPAFANVASKIKPNQISAPFKSQFGWHILKVTDTRNGDR
                     TEDAYHQRAYQQLVNKQAEEASKDWVKALRKTANIQYVGQ"
     gene            complement(9327..9881)
                     /gene="pyrR"
                     /locus_tag="PXE50_001993"
     CDS             complement(9327..9881)
                     /gene="pyrR"
                     /locus_tag="PXE50_001993"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HDL5622867.1"
                     /translation="MAREKIIIDTEQFQRTISRISHQIIEKHGDLQDVVIVGIKRRGA
                     EIAELIQKRIEDLAQTRLPYMALDITFYRDDLDLIYQDPVFMGADNQLNLNGKKVILV
                     DDVLFTGRTIRAALDALLDFGRAARIELVIFVDRGHRELPIRADYVGKNIPTAKNEQI
                     QVQTLSYDGINQVVLVPAANKESA"
     gene            complement(9895..11322)
                     /gene="hldE"
                     /locus_tag="PXE50_001994"
     CDS             complement(9895..11322)
                     /gene="hldE"
                     /locus_tag="PXE50_001994"
                     /EC_number="2.7.1.167"
                     /EC_number="2.7.7.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase/D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase HldE"
                     /protein_id="HDL5622868.1"
                     /translation="MMMQYSPKFNNAKVLVLGDVMLDRYWFGATNRISPEAPVPVVKV
                     QDIEERAGGAANVAMNIASLGVPVTLHGLIGDDDAGRALDKLLNSHQIQNHCVVINSH
                     PTITKLRILSRHQQLLRLDFEEGFHNVDSTALLAKLSQEITAYGALILSDYGKGTLES
                     VQQMIQIARNAKVPVLIDPKGTDFERYRGATLLTPNMSEFEAVVGHCKDEDEIVSKGL
                     KLIADYDLSALLVTRSEKGMTLLRPNHEPYHLPTQAKEVYDVTGAGDTVISVLATAIA
                     DGRAYEEACYLANAAAGVVVGKLGTSTVSPVELENAIHQRTATGFGVVSEAELKAIVE
                     EAKKRGEKIVMTNGCFDILHPGHVSYLENARKLGDRLIVAVNTDASVKRLKGEARPIN
                     DLAARMAVLAGLASVDWVVPFDEDTPQRLISEILPDLLVKGGDYKPEEIAGSQEVWAN
                     GGDVRVLNFENGCSTTNVIKKIQAL"
BASE COUNT         3469 a         2155 c         2454 g         3292 t
ORIGIN      
        1 aatgaaatag ttttttttac taataagttg gatttattca atataataat ctggtatgac
       61 ttgaattaat gggctggtaa acggttgcgt gaagagaaaa atgctattga cattgatttg
      121 gataaggata atatacacct caactactga ataacaatgc aaacataaac atacaacaca
      181 acatggaaaa atttacctta ctccgattat ctctgttatc gtattttgtg cgaggataaa
      241 gattgattgg aaaaagtaaa tggactatcc acattcttgc ccgcacctta aaatgcgggc
      301 tttttttatc aaataaaaac acctaaaaag aggcttctat gagcaacaat aacattatta
      361 tttttgatac gactttacgt gatggtgagc aatcattaaa agcaagttta accgtaaaag
      421 aaaaattgca aattgccctt gctttagaac gtttaggggt tgatgtgatg gaagtcggtt
      481 ttccagtttc ttcagcgggc gattttgaat cagtacaaac catcgctcgt catatcaaaa
      541 acagccgggt ggcggcgctt tcccgagcgg ttgcaaaaga cattgatgca gcttatgaag
      601 ccttaaaagt agcagaagca ttccgtatcc atacctttat tgccagctcg gcattacacg
      661 ttgaggctaa attaaaacgt tcatttgatg atgtagtcga aatggcggtt gcagcggtaa
      721 aacgcgccag aaattatact gatgatgttg agttttcctg tgaagatgct gggcgtactg
      781 gaattgataa catctgccgc attgtagaag ctgccattaa tgccggtgca accacagtga
      841 atattccgga tacagtcggt ttctgtttac cgaatgaata cggcaatatt atccaccaag
      901 tgatgaaccg tgttccgaat atcgataaag cgattgtctc tgttcactgc cataacgatt
      961 taggtatggc taccgccaac tcattgacag cggtgcaaaa cggagcgaga cagattgagt
     1021 gtactatcaa cggtattggc gaacgtgccg gtaacaccgc tcttgaagaa gtggtaatgg
     1081 caattaaaac ccgccaagaa tttatggggg ttgatacccg cattaatacc caagaaattc
     1141 accgtgtcag ccaaatggtc agccagcttt gcaatatgcc gattcagccg aacaaagcga
     1201 ttgtcggtag caatgccttt gctcactctt caggtattca ccaagacggt atgctgaaaa
     1261 ataaaaatac ttatgaaatt atgtcgccgg aaaccatcgg cttgaaaaaa gagaagctga
     1321 atttaactgc ccgttcaggt agagcagcgg tgaaagggca tatggctgat atgggttata
     1381 cggaaacgga ttacgattta gataaacttt atgaggcctt cttgcaactt gctgataaaa
     1441 aagggcaagt gtttgattat gacttagaag ctcttgcctt cattgatatg cagcaaggcg
     1501 atgaagaccg cttaaaatta gatgtaatta ccacccaact aatcagcggt ttaccggctt
     1561 cggcttttgt acaggtggaa ttagacggcg ttcgtcaaag tgctacatct caagggggaa
     1621 atggtccagt tgaggcaact tacaatgcca ttatgaacat tgtgggaatg gagctaaaaa
     1681 tgtcgcacta taatctgact gcgaaaggcg aaggagcaga agcattaggg caagtggata
     1741 ttgtagtgga atatgaaggt cgaaaattcc acggtgtggg tttggcaacc gatattgtgg
     1801 aatcttcagc ccgagcttta attcacgcca ttaatgcgat ttaccgttca caaaaagtgg
     1861 cagatttaaa agcgaagaaa taacttatag agcgaaagca taacatagac aagcggtcgg
     1921 attttttgaa atttttgcaa aatttcgcta aaatccgacc gcttgcttag tttattaagt
     1981 aggttttatc taggaatgta aaaaattaca caatttttca aattttttga acttttgtca
     2041 taaagcacac actaacaaag tgtgcaatgg aaaatgacat attgatattt aggagagtcc
     2101 gcagttgagc gaacagatca ccgaccaaga attagtcgaa aaagcacaaa aaggtgataa
     2161 aaaagcattt aatttacttg ttgtacgtta tcaaaataga gtagccggtt tgctgactcg
     2221 ttatgttgca agagatgata ttccggacat tgtgcaagaa tcttttatta aagcctatcg
     2281 ttctttagag tctttccgtg gcgaaagtgc tttttatacg tggctttatc gcattgcagt
     2341 gaatactgcg aaaaatcatt taacctcttt aggcagaaga ccgccaaaag aagatattct
     2401 tgccgaagac gctgaaagtt atgatgtagg cgcgcaactt cgtgaaagtg atacgccaga
     2461 gaatttgata ttatccgagg aattaaagaa agtcgtgttt gatacgattg aaaatttacc
     2521 tgatgagctt aaaaccgcca ttcgtttaag agaattggaa gggctaagtt acgaagaaat
     2581 cgcagaagtg atggaatgtc cggttggtac tgtacgttcc cgtattttcc gagcaaggga
     2641 agcgattgat gctaaaatca agccacttat gcaatagata gaaagattat tttagaagag
     2701 atttaaatca ttggagtcaa ttatgcaaga acgcatcact caacaaaatg aacgcctttc
     2761 agcttatatg gatgggcaaa atgttgatac agcatttgta gaaacattaa ctaacagccc
     2821 tgaattacag caaaaatggg caagttatca cactattcgt agtgtgatgc aaggtgatga
     2881 gatcatttta gggagagatt tctctgctaa aatggaagca ttactggaaa atgaagaaat
     2941 tgaatctcaa gcaaatgtag agaaacctaa aggcttattg ctcaagctca agcgttgggg
     3001 aactccaatt atgcaagccg gtattgcagc ttcagtgtgc ttagttgcgg tattaggggt
     3061 taattcaatg aatgcgagtg atgaaatagc tcaaacgcaa caaccagtat tacaaacatt
     3121 gccatttagc aattcagttg aagcggtaag ttataatgcg ccagttcaag atcaaccaac
     3181 agaagaacag ttagagcttc aacagcgtaa gattaatgcg ttattagaaa accatgagtt
     3241 acaacgccgt actaataacg ttaaaaattt aaccttatct gaggaagaaa agcaaaaagc
     3301 acaaacttct tccaatacag aatcagagcc aaatatacaa aaataatagg taaaataagt
     3361 tactgaaagc cacataattt atccataatt atgtggcttt ttgtatgtaa atgtagcgaa
     3421 aaaataagaa ataaccaaca agtagcgaaa tagtgaaaat tttttgctaa aataacctaa
     3481 gttaatttgg cttgagaata aatatgcttt ttaagataaa aaaatactta ttgttgtttt
     3541 gggttatttc tgcctgctat acatttgctt gggcagaatc aactattaaa acaccattag
     3601 catatttaac ggctatgtca gaagcacata aaaaatccac ttatgaatta gtttatattc
     3661 ttcaacaggg aagtgataca gaatctttcc gtttacgtca tgcttttacc cataataaag
     3721 aatatgccca attactgaat ttagatcaca gccgagaaga aattatttta aaaaataaca
     3781 aggtcagcta tttggggtat aattttcgtc cttttagttt aaatagttca cagattttag
     3841 ataacctccc taatgtactt tacacagatt atgcaaattt aaaaggttat gcctttttag
     3901 atgctggtaa agatcgtatt tctgaccgaa ttacaaaggt aattcgtatg aagccaaatg
     3961 atactttaag atatgcctat atactatgga ttgatgaaga aacacattta ttacttaaaa
     4021 gccaagtctt gaatatggat aatttggtat tagaagaatt cagagttttg caactttatc
     4081 aatctccaga attggatagg attgcaaatg taatagaatc actaatgtta ccaacattaa
     4141 cgacagtgaa aaaagaagaa tttcctaagt ctgatggttg gcaggtgaag tggttgccga
     4201 cagggtttag gttaattcag caacaaacag tcacaggtgc gacatatcaa gtggaaagtg
     4261 agtatgtaga tagcagagta tatagtgatg gtttatctac attaactatt tatattatgc
     4321 ctagccaagg cgtgagtttt aatgagtacg cttggcaaca aggtaaatta acgattttaa
     4381 atcaaacgat taatgataga gatattgtga ttattggtga tgtgccgttg caatcggcta
     4441 agcaaattat gaacaatatt ggttttaagg aaggagctca gccatgatga tcgaacaggc
     4501 tacggtggtg gaatatcaga atggtgtggc tattgtacaa tgttatgcta aaagtagctg
     4561 tggtggctgt gtagctcagt ctgcttgtgg cagcaaagca ttatcagcat tagcaggtga
     4621 aaaaattgac cctcgttttc gtattgaggt agatgaaccc ctaaaagtag gcgataaggt
     4681 tgaactaggg ttagctgaaa atatcttgct caaaagcgtg tttttaattt atggcattcc
     4741 tctgctggtt cttgtgatga cagcggtcgg attttcgcaa ttttttgcaa atgagcttat
     4801 tgttttattt ataatgttgc tttcaacagg tataacattc tgggctgtaa gaaaattgat
     4861 tcataaacac agcaaacaag caaatttttc acctatcttt ttaggtaagg ttttaggaga
     4921 ctataatgga aaaaatatgg ctaaataatt atccgcctta ttcaccaaaa acgattgaaa
     4981 cagatcaata tgaatcttta gtggaaatgt ttgaagcagc gatacaacgc caccctgata
     5041 ttccagctta tattaatatg gggcaggttt taacgttccg taaattggaa gaacgtagcc
     5101 gctcgtttgc cgcttatttg caaaatgaat tacgcctgaa aaaaggtgat cgaatcgcat
     5161 tgatgatgcc gaatttattg caatatccga tcgctttatt tggcgcatta cgtgccgggc
     5221 ttgtggtggt gaatgtcaac ccgctttata cgccgcgtga attagaacat caattaaatg
     5281 acagtggtgc gaaagcgatt gtgatagtct cgaacttcgc ggctacctta gaaaaaattg
     5341 tctttaatac tgagattaag cacgttattt tgacccgaat gggcgaccaa ctttcattcg
     5401 gcaaacgcac cttagtcaat tttgtggtga aatacatcaa aaaattagtg ccgaaatata
     5461 aattgccaca tgcggtcagc ttccgtgaag ccttaagcat tggcaaacag cgtcaatatg
     5521 taaaaccgaa tattgtcagc caagatctcg cctttttaca atacactggc ggtactacag
     5581 gtgtagcgaa aggggcaatg ctgactcatc aaaacttaat tgctaatatg atgcaggcaa
     5641 aatggattgt tgagccattg ttgggtaatt ctgccaatat gattggattg gtacctttac
     5701 cgctgtatca cgtcttagca ctttcgatga attgcttgct ctttatcgaa ttaggactta
     5761 ccggattatt aattactaat ccgcgcgata ttccaggctt tattaaagaa ttaaaaaagt
     5821 acaaagtttc agtgattact ggggtaaata cattgtttaa tgcattactt aatcacgaaa
     5881 gttttaaaga ggttgatttt tcacacctaa aattaagtgt aggtggcggt gcagcgatcc
     5941 aatctagcgt ggcaaaacgc tggcacgatt taaccggcgt acatattatc gaaggttatg
     6001 gaatgacaga atgttctccg ctgattagtg caacccgtgg cgattcggtg gaatattccg
     6061 gctctattgg cgtgccagtg ccaaatactg acattcgtat tgtggatgat gaaggcaaag
     6121 aagtaccact cggcgaacgg ggcgagctgg tggtgaaagg gccgcaagta atgcaaggct
     6181 attggaaccg tcctgatgaa acggcacaag tgctacaaga tggttggatg gcaaccggtg
     6241 acattgtggt aatgggggat gatctgaact tacgcattgt tgatcgtaaa aaagatatga
     6301 ttattgtctc cggttttaat gtgtacccaa ccgaaattga agaagtgatt tcccaaaacc
     6361 caaaagtgaa tgaagtagtg gcgattggtg tgccgagtga ggcttccggc gaaagcatta
     6421 aaatttttgt aaccaaaaaa gatgaaagtt taactcgaga tgaattgaga acctattgtc
     6481 gtcaattctt aaccggctac aaaattccaa gagacatcga attccgtgac gaattaccaa
     6541 aaagtaatgt cggcaaaatt cttcgccgag tgttaagaga cgaagaatta gcaaaggtga
     6601 ataaggctta aattacacta attaaggagc ttaaaatgaa aattgttgaa gtaaaacacc
     6661 cacttgtaaa gcataaattg ggcttaatgc gtgaagcgga aatcagcacc aaagatttcc
     6721 gtgagctagc gaatgaaatt ggtagtctgc ttacttacga agcaaccaaa gatctggaaa
     6781 tggaaagtgt ggagatcaat ggctggagcg gagagaaaat tgcggttgag cgaattaaag
     6841 gcaaaaaagt gactgttgtg ccgattctgc gtgctggctt aggtatgatg gacggtgtgt
     6901 tagagcatat tccaagtgcc agaattagtg tggttgggat ttatcgtgac gaagaaacct
     6961 taaagcccgt gccgtatttc tccaaactag ccaacgatgt tgatgagcgt ttagccatta
     7021 tcaccgaccc aatgcttgca accggtggct caatggtagc aaccattgac ctcctgaaaa
     7081 aagcaggctg taagcagatt aaagtgctag tgttagttgc cgctccagag gggattaaag
     7141 tattagaagc cgcccaccca gatgttgaac tctacaccgc ctcaatcgat agtcacttaa
     7201 acgaaaacgg ctatatcatt ccaggcttag gcgatgcagg ggataaaatt ttcggcacca
     7261 agtaacatca aaactaagta acagcaaaac aagtaaagct gatttaaaca agcggccatt
     7321 tttcactaaa gatttgcaaa tcttggtaga aaaatgaccg cttgtaattt attgattagc
     7381 aatcttcatc aaccaattct tcggttgtat caattgccgg cgggttgtcg tgtagccagt
     7441 tagccaaacg cacataatcg gcaatggtaa ggttttccgc tcgggcggtt aaatcaacgc
     7501 ctaaggcgtc cagttgctcc gcactaaaca gggttgaaag agcattgcgt aaggttttac
     7561 ggcgttggtt aaaggcttga gtcgtgaccc gattgagcca atacacatct tttgccggat
     7621 aaggcagttg gttataaggc actaaacgca ctaccgcaga atcgactttt ggtgccggtt
     7681 taaaggcggt tggcggcact tccagcaccg gaattacttg gcaatagtat tgagccataa
     7741 tggttaaacg cccgtatgct ttactgtttg gcgcggcaca taaacgtttc accacctctt
     7801 tttgcaacat aaagtgcata tcttgaatta agtcgtgaaa ggtcagcagg tggaatatca
     7861 agggcgtaga aatgttgtaa ggtaagttac caaacacacg caccgagtct tcgtctaagt
     7921 tgagttggtt aaaatagtca cggaaattaa agcgtagggc atcttgctca ataatggtga
     7981 gtttttggtt taaaaacggg tggtggcgta aacgctctgc taaatcacgg tcaatttcaa
     8041 ccaccgtgag tttatctacc aattcggcaa ccggctcggt taatgctcct aaacccggac
     8101 cgatttctaa taaaaattgt ccgtttttcg ggttaatggc tgaaactatg ctgtgaataa
     8161 tgttcatatc gtgcaaaaag ttttgcccga aacgcttacg agcggtatga cctaaatgtt
     8221 ttttggaatt tgtagaactc attgttatcc tttttgaaat aagaaaagaa ccccgcatta
     8281 tgcgaggttc ttaaaaattt taattattga ccgacatatt gaatattggc ggtttttcta
     8341 agcgctttta cccaatcttt agaggcttct tcggcttgct tgttcaccag ttgctgataa
     8401 gcacgttggt ggtaagcatc ttcggttctg tctccgttac gagtgtcggt gacttttaaa
     8461 atatgccaac caaattgcga tttaaacgga gcagaaattt ggtttggttt gatttttgat
     8521 gcaacattcg caaatgccgg atcgtaaatt tctaagaagt taaaacctaa atctccaccg
     8581 tctgcccctg aggcataatc aacagaatgg gtttttgccg cttcttcaaa gctgattttg
     8641 cctgagttaa tatcagtagt taagctgcta agttttgctt tggcttgagc atcatttaaa
     8701 atcgggttgg ttttgagcaa aatatgacta atgcgatgct ctttgccaga aacggttttc
     8761 aatttgcctg ctgctttatc tttcgccatt aactctttcg ccagagcttg cacttgctgt
     8821 ggtgcaacct gaatcgattt gctaatgctg atatggcgaa cttgttccat tgccatttgt
     8881 tgagcaatat tacgtttgaa ttgttcaagt gtaatacctt gataatctaa cgcatctaat
     8941 aactgaccgt aagtaatgcc gttttgaatt gctacatttt caaccgcttg gtttaccgca
     9001 gctgggctga ctttaacgcc ggcttctttc attgcctgtt gcaccaacat atcatcaatc
     9061 acttgatcaa tagccgcacg ttgagcagtt tctgtcgcct ttttcttgcc aagcacacgt
     9121 tgaacctggc tttgcataat aggggtatca ttcactaacg ccaccactct ttcttcaaat
     9181 gcgtgggcgg tttgggtaag actcattgtt gcaacggcaa cagcaaataa tgatttgact
     9241 aatttcattt ttataacaat cctaatggag gtaattaagc agtaactttt ccttagagat
     9301 aagtttagcg aaaaggttca cttaatttaa gcactttctt tattggcagc aggaactaag
     9361 accacttggt taatcccatc atacgagagc gtttgcacct gaatttgctc gtttttagcc
     9421 gttggaatat tttttccgac ataatcggct cggataggca attcccgatg acctctatcg
     9481 acaaaaatca ccagttcaat tctggcagct ctgccaaaat ctaagagtgc atcaagtgcc
     9541 gcccgaatgg ttctgccggt aaacagaaca tcatcaacca aaatcacttt tttaccgttc
     9601 agatttagct gattatcggc tcccataaat acgggatctt gataaattaa gtctaggtca
     9661 tcacggtaga acgtaatatc taacgccata taaggcaagc gtgtttgagc taaatcttca
     9721 atgcgttttt ggattaactc ggcaatttca gctcctcgac gtttgatgcc gacaatcact
     9781 acatcttgca aatcaccgtg tttttcaata atttgatgtg aaatacgaga tattgtgcgc
     9841 tgaaattgct cggtatcaat aatgattttt tctctcgcca ttcgcttatt accattatag
     9901 tgcttgaatt ttcttgatca cattagtggt agaacagccg ttttcaaagt tcaatactcg
     9961 cacatcgccg ccgtttgccc atacttcttg gctgccggca atctcttccg gcttgtaatc
    10021 accacctttt accaataaat caggtaggat ttcactgatt aaacgttgtg gtgtatcttc
    10081 atcaaaaggc acaacccaat ctacagaggc taaaccagct aaaactgcca tacgggcagc
    10141 taaatcatta atcgggcgag cttcgccttt taggcgtttt accgaagcat cggtattgac
    10201 ggctacaatt aatcggtcgc ctaatttacg ggcgttttcc aaataggaaa cgtgaccggg
    10261 gtgaagaata tcaaagcaac cgttcgtcat cacgattttt tcgccacgtt ttttcgcttc
    10321 ttccacaatc gcttttaatt cggcttcaga aaccacgcca aaaccggtgg cagtgcgttg
    10381 gtgaatcgca ttttccagct caaccgggct gacggttgaa gtccctaatt tacctacgac
    10441 tacaccggcg gcagcattgg ctaaatagca ggcttcttca taggctctgc catcggcaat
    10501 cgcagtggct aatacactga ttacggtatc gcctgcaccg gttacatcat aaacctcttt
    10561 ggcttgggtc ggcagatgat aaggctcgtg gttcgggcga agtaaggtca ttcctttttc
    10621 cgaacgggta actaatagtg cagataaatc atagtcggca atcagtttta accctttgct
    10681 gacaatctca tcctcatctt tacaatgccc aaccaccgct tcaaattccg acatatttgg
    10741 tgtaagcaat gttgccccac gatagcgttc aaagtctgtg cctttcgggt cgatcagcac
    10801 cggcacctta gcattgcggg caatttggat catttgttgc accgattcca atgtgccttt
    10861 gccgtaatcc gagagaatta atgctccgta agcggtaatt tcttgcgaaa gttttgcaag
    10921 tagggcggta gaatctacat tgtgaaaacc ctcttcaaaa tccaaccgca ataattgctg
    10981 atggcgggaa agaatccgca attttgtgat ggttgggtgc gaattaatca ccacacaatg
    11041 attttggatc tggtgggaat taagtaattt atctaaagca cgcccggcat catcatcgcc
    11101 aattaagccg tgtaatgtta ccggtacgcc aaggctggcg atgttcatcg ccacgtttgc
    11161 cgcaccgccg gcacgctctt caatatcttg tactttcacc accggcacag gggcttcagg
    11221 cgaaattcga ttggttgccc cgaaccagta acggtctaac attacatcgc caagcaccag
    11281 cactttagca ttattaaatt ttggagagta ttgcatcatc atagttaata ttctctgtta
    11341 aatgatggcg caagcgtcca cgcttgtgcc
//
LOCUS       DANLZQ010000089        11348 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.089, whole genome shotgun sequence.
ACCESSION   DANLZQ010000089 DANLZQ010000000
VERSION     DANLZQ010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11348)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11348)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11348
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.089"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            149..1945
                     /locus_tag="PXE50_001995"
     CDS             149..1945
                     /locus_tag="PXE50_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate-specific subunit IIBC"
                     /protein_id="HDL5622869.1"
                     /translation="MDFLTEILLFLKDQVLNKAPFLLGIVACLGYILLKKDTSTIIKG
                     TIKTIVGFMIVQAGSGFLVTNFKPVIDGLAKYHQLTGAVIDPYTSMQSTIQTMGENYA
                     WVGYAVIGALFLNILLVVFRRLTGIRTIMLTGHIMFQQAGLVAVFYMIIGASMWETII
                     YTSVLMALYWGISSNIMYKPTQAVTGGAGFSIGHQQQIASWIAVKLAPKLGDKDDTVD
                     KMKLPNWLNIFHDSISATALVMTIFFGIILLSFGLDNLKELAGKTNQFMYILEMGLKF
                     AVAIQIIVTGVRMFVAELSEAFKGIAERLIPNSVLAIDCAAIYAFSPNAMVFGFMWGA
                     IGQFVAVGGLLAVGSPVLIIPGFIPMFFSNATIGVFANQFGGWKAVMKICFVMGIIEV
                     LGSAWVIQMLASQGTTFNGWMGMADWALFFPPILQGIISIPGFFFVIVAAAMVYMFFA
                     SKQLRAEEAEAAARGITLEQLDGYGLDEVKAEPKAEAVVQQAVENAENSANPIRILAV
                     CGSGQGSSMMMKMKIKGYLDKRGIPNIMDSCAVTDYKGKLSEVDIIVSSKHLANEIEV
                     PEGKAVLGVQNMLNPNSFGDELVELINQHNAK"
     gene            2025..3086
                     /locus_tag="PXE50_001996"
     CDS             2025..3086
                     /locus_tag="PXE50_001996"
                     /inference="COORDINATES: protein motif:HMM:NF012376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDL5622870.1"
                     /translation="MKKILSTLFMLSAVSVAVAKEVNIKLLGTSDVHGRVVPWSYGAD
                     VEDKSGSFAQIATYVKEVRANHKNVLLFDIGDAIQDNQVEEFAKTLDKAKNNPVPKVL
                     NAMNYDIFILGNHEFNFGMPNLDAILKDINAKILTANFYHKDGKRYVEPTTIIERDGV
                     KLGIIGLTTPMSAIFEKDTGHLDAMKFTSPIEEAKAQIADLKAKGVDAIIVLAHMGIE
                     NENNIPDTGVADLVNAVDGIDVIIAGHMHKDVPSETIKNTLITEPHRYGTVVSEVDLA
                     FDVNDKGEVKLLSKTAKTVPVKKLASDPEIEKIYQPYHNELRALNNVKIGETAQDLIP
                     QGKITVYRLLSRKTPECPH"
     gene            3074..3538
                     /locus_tag="PXE50_001997"
     CDS             3074..3538
                     /locus_tag="PXE50_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /protein_id="HDL5622871.1"
                     /translation="MSSLIHDVQQHYSGADVVSFAFDYETVRLDKGDIKKKDIIYNYR
                     YAGGDVSMYELTGKQLKQYMEWSADYFDTIQAGDKDYRYNAVRGKSKYVTFDLFGGVS
                     YNIDLRNPSGSKIVDLKLANGSLITDDGKYKVGMNSYRFGQLTKKGGIWEGQ"
     gene            3569..3685
                     /locus_tag="PXE50_001998"
     CDS             3569..3685
                     /locus_tag="PXE50_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ser/Thr protein phosphatase"
                     /protein_id="HDL5622872.1"
                     /translation="MGAEKGTIQNMLIDYITNVKGGKIEGKSHNRWAIIGLN"
     gene            3701..4168
                     /locus_tag="PXE50_001999"
     CDS             3701..4168
                     /locus_tag="PXE50_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDL5622873.1"
                     /translation="MNLKQSLIENNSILLNQSAANWEDAIKIGTDLLVKAGTIEPRYY
                     DNIVSKIKEMGPYIILAPGLAMPHARPEEGVIKTSFALVTFDTPIYFEGEDEPVHVML
                     TLAGSDSDQHMQGLVEITQVLDDPESDTGVDLDKIRRCKTAEEVYAVIDQALA"
     gene            4223..4903
                     /locus_tag="PXE50_002000"
     CDS             4223..4903
                     /locus_tag="PXE50_002000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-L-gulonate-6-phosphate decarboxylase
                     UlaD"
                     /protein_id="HDL5622874.1"
                     /translation="MSKPLLQIALDSLSLEKAVADAKQAENQVEIIECGTILAFAEGM
                     KAVSTLRVLHPNHIIVCDLKTTDGGAILAKMAFEAGADWLTVSAAAHPATKAACKKVA
                     DEFNAAHPELKVKKEIQIEIYGNWTVEKDAKEWVELGVTQAIYHRSRDAELAGKGWTT
                     EDVELMKQLSDLGIELSITGGIVPEDIHLFKEIKNAKAFIAGRALVGEKGKQTAEAIR
                     VEIDKYWN"
     gene            complement(4971..6113)
                     /locus_tag="PXE50_002001"
     CDS             complement(4971..6113)
                     /locus_tag="PXE50_002001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HDL5622875.1"
                     /translation="MKIVIAPDSFKESLTALEVAQAIQQGFARVFPEAEYQLVPMADG
                     GEGSVQSLVDATHGSLQKISVIAPLANEVEGFFGLSGDQKTAFIEMAAASGLHLVPME
                     QRNPLVTTSYGTGQLIKAALDLGVEKIILGIGGSATNDGGVGMLQALGAKFLNAEQRE
                     IGFGGEALSQIQQIDLSGLDSRLKQVEFEVACDVDNPLCGERGASAIFGPQKGATPEM
                     VKMLDHALLHFAETVKSQLGIEIAEKAGAGAAGGMGGGLLLLPNVTLRSGVQIILEAT
                     DLAEKLADADLVVTGEGRMDAQSIAGKTPIGVAKVAKQFGKPVIAIVGSLKEDYPVVY
                     QHGIDAVFPIIRQVSNLEAVLKSGKENLISTAENVARLWKISALQE"
     gene            complement(6123..7502)
                     /locus_tag="PXE50_002002"
     CDS             complement(6123..7502)
                     /locus_tag="PXE50_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005757929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HDL5622876.1"
                     /translation="MSGIALILIFLVAIIIMIYMIAKWKVHPFLALMSISIALALVAG
                     LPLAKIPTIVGEGFSNTFKSIGIVIIFGAIIGTILEKTGAALKLADMVVKVVGQKRPE
                     LAMLIMGWVVGIPVFCDSGFVVLNPIREAIRKKILANPVGMAVALSAGLYASHVFIPP
                     TPGPIAAAGAVGLSHNLLLVIGMGFVVSIPVLIASYFFAKYVGKQVSVMEEAQADQVI
                     SQSYEDLIKQYGKLPSGFLSFAPIFMPIILMAIGSIAKIAGVSGDFGVFLQFVGNPII
                     ALAIGVIFAIFLLVSSGKMAEFDSLTNDTLKLVGPILFITAAGGVLGNVITQAGFVDY
                     IKQNAHIISTAGIFFPFLISAILKTAQGSSTVAIITTASIMGMFNAPDSLMNALGLTS
                     EMAAALTVMAIAAGSMCVSHANDSYYWVVTNFTKLTPQQGYRTQTTLTFIMGVVGMLT
                     VYLLSLILL"
     gene            complement(7624..8718)
                     /locus_tag="PXE50_002003"
     CDS             complement(7624..8718)
                     /locus_tag="PXE50_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5622877.1"
                     /translation="MKLNQAIADRIVKRTMQIIPNSVNVMDSEGVIIASGDVGRIGQR
                     HTGAVIALRNDQAVEIDENLAKQWCDEVKAGINLPLHYLGSTIGVVGISGQPQQVRQY
                     AQLVKMAAELIMQQAFELEQERWQRRYREEFVRALLKGSLSTAEIQQQAVFFGQDFAK
                     PLSVMVIKIHGSTAEKLQRLIDFFEHYFPSLLTAVIGLDKIALLNHLSNEKSLIRNAL
                     NKLNDPDISFKTVVGLAVENLSQTHISYQTACHTLNYAEQIQSRKQIIHFEDFKLPAL
                     LHSFSHSWEAKTLLSPFQALLVSDKKQVLLKSLRYYFFANCDLDHAAKKLFIHPNTLR
                     YRLEKIEQITGLSFNNIEQKFVLYLGAVLS"
     gene            complement(8822..9274)
                     /locus_tag="PXE50_002004"
     CDS             complement(8822..9274)
                     /locus_tag="PXE50_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HDL5622878.1"
                     /translation="MNLKAVAVSALAMSSVAMADIADVKPVVFESKFDFQTTVTTLTN
                     TLKEKGMTIFAEIDHQAAAKQAGLEMQPATVLVYGTPKAGTPLMVKDPMLALQLPLKV
                     LITEPNKGKVEVMLNRADQVVAHANTDYADVENNLAKAEKLIKATVAK"
     gene            complement(9295..10047)
                     /locus_tag="PXE50_002005"
     CDS             complement(9295..10047)
                     /locus_tag="PXE50_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase family protein"
                     /protein_id="HDL5622879.1"
                     /translation="MHFEKRSHWSGELGREMSFNVYGHAGKPVIVFPSSGGNENEYGN
                     FGMIEACRSFIERGLIKFYTPDSYDAESWLSKHKSGHDMALAHNAYDRYIIHELVPLI
                     RHESHWNGTMIATGCSMGAFHTVNFALRHPDLFDIAIALSGVYDARFFSGEFYGDKAV
                     YFNSPIDYVWGQNDDWFLDRYRQNHYVIAVGQGAWEEQHIEDTRRLQEAFNAKGIDAW
                     FDYWGFDIDHDWPTWRKQMPYFLGKLEEQGII"
     gene            complement(10058..11242)
                     /locus_tag="PXE50_002006"
     CDS             complement(10058..11242)
                     /locus_tag="PXE50_002006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HDL5622880.1"
                     /translation="MSRPLNFVMISPHFPTNFETFAIRLREAGFNTLGIADAPYESLS
                     ENLRHSLTEYYRVDNMEDYEQVYRAVAYFAHKYGRIDRIESHNEYWLELDAKLRTDFN
                     VFGYKSDDMLSIKTKAQMKEVFRKTGLKVAQGRVFKDDEDARKLAKQLKFPVIIKPNS
                     GVGASDTYKIKTAEELEAFFGYKTPTVEYIMEEFIDGDIITFDGLTDKEGNIVFYSSL
                     EYSEAVLDTVSKDGDMFYYVPCEISPKLVEMGKQCVKAFNVKERFFHFEFFRVKGSKK
                     EELLPLEINCRPPGGLTIDMWNYANDFDVFREFANIVKENKFYADIQHPWNVVYISRK
                     ANQNYVNSIEAVCEKFAGNIISVQSVPGVFAKVMGEQGILARTETMEQMREIAQFAQA
                     KQ"
BASE COUNT         3278 a         2599 c         2364 g         3107 t
ORIGIN      
        1 catgacgaga ttataaaaat aaaatgtgat ctcgctcaca aataattaaa aataatcttt
       61 tttaatcttt ttctagcgtt tatcattaat tccgacaact tctctggagt tttttagttc
      121 tattaatctc tcaacaaaga ggccccctat ggacttttta accgaaattc tccttttctt
      181 aaaggatcaa gtgctgaata aagcaccctt cttactaggt atcgtagctt gcttaggtta
      241 cattcttctt aaaaaagaca cttctacgat tattaaaggc acaattaaaa caattgtcgg
      301 ttttatgatt gtacaagccg gttcaggttt cttagtaacc aactttaagc cggttattga
      361 tggcttagcc aaatatcacc aacttaccgg tgcagtaatt gacccttaca ccagtatgca
      421 atcgaccatt caaaccatgg gcgagaacta cgcttgggtt ggttatgccg taattggggc
      481 gctgttcctc aatattctat tagtggtgtt ccgccgttta accggtatcc gtaccattat
      541 gctcaccggt cacattatgt tccaacaagc aggcttggtt gcggtgttct atatgatcat
      601 cggagcgtca atgtgggaga ccattatcta cacctcagtg ttgatggctc tttattgggg
      661 tatttcgtct aatattatgt ataaaccaac ccaagcggta acaggcggtg caggcttctc
      721 aattggtcac caacaacaaa ttgcttcttg gattgcagtc aaactcgcac caaaacttgg
      781 cgataaagac gatactgtag ataaaatgaa attgcctaac tggctcaata ttttccacga
      841 cagtatttct gcaaccgcat tagtaatgac catcttcttt ggaatcatct tactttcatt
      901 cggtttagat aacctcaaag aacttgctgg caaaaccaac cagtttatgt acattcttga
      961 aatgggcttg aaatttgcgg tggcaattca aatcattgta accggcgtac gtatgtttgt
     1021 agctgagctt tcagaagcct tcaaaggtat tgctgaacgc ttaattccaa actcagtatt
     1081 agcgattgac tgtgccgcta tctacgcttt ctcgccaaat gcgatggtat tcggctttat
     1141 gtggggggct atcggtcaat ttgtggcagt aggcggcttg cttgcagtag gctcaccggt
     1201 gcttattatt ccgggcttta tcccgatgtt cttctctaac gcaaccattg gtgtgtttgc
     1261 aaaccaattt ggtggttgga aagcagtaat gaaaatctgt tttgtgatgg gtattattga
     1321 agtgcttggc tcagcttggg ttattcaaat gcttgcttca caaggcacaa cctttaacgg
     1381 ttggatgggt atggctgact gggcattgtt cttcccacca atcctacaag gtattatcag
     1441 cattccgggc ttcttctttg taattgtggc agcagcaatg gtttatatgt tcttcgcatc
     1501 taaacaactt cgtgccgaag aagcagaagc ggcagctcgt ggcattacac ttgaacaatt
     1561 agacggctac ggcttagatg aagtaaaagc agaaccaaaa gcggaggcag tagtacaaca
     1621 agcggtcgaa aatgccgaaa attctgcaaa cccaatccgc attctagcgg tgtgtggctc
     1681 tggtcaaggc tcatcaatga tgatgaaaat gaagatcaaa ggctatctcg acaaacgtgg
     1741 tattccgaat attatggatt cctgtgcggt aactgattac aaaggcaaat taagcgaggt
     1801 tgatattatt gtctccagca aacatttagc caacgaaatc gaagtaccgg aaggcaaagc
     1861 ggtattaggt gtacaaaata tgctaaatcc aaactcattt ggtgatgaat tagttgagct
     1921 aatcaatcag cataatgcaa aataagtaag tttaggggtg aataatcacc cctatctatg
     1981 ctaaagattg taaaaactca cttcatcaaa cgaggaatta tccaatgaaa aaaatcttat
     2041 ccaccctgtt tatgctctcc gcggttagcg ttgccgttgc caaagaggta aacattaaac
     2101 tacttggtac ctcagacgtt cacggacgtg ttgtgccgtg gagctacggg gcagacgtgg
     2161 aagacaaatc cggctcattc gcccaaattg caacctatgt caaagaggtg cgtgccaacc
     2221 acaaaaatgt gttgctgttt gatattggcg atgcgattca agacaaccaa gtcgaagagt
     2281 tcgctaaaac cttagacaaa gcgaaaaaca atcccgtgcc gaaagtgctg aatgcaatga
     2341 attacgacat cttcattctc ggcaaccacg aatttaactt cggaatgccg aatttagatg
     2401 cgattttaaa agacatcaac gccaaaattc tcactgccaa cttctatcac aaagacggca
     2461 aacgctacgt tgagccaact accatcattg aacgtgatgg cgtaaaactt gggattatcg
     2521 gcttaaccac cccaatgtcg gctatttttg aaaaagacac cggtcattta gacgcaatga
     2581 agttcacttc gccgattgaa gaggcgaaag cccaaattgc cgatctcaaa gccaaaggcg
     2641 tggacgccat tattgtgctg gcacatatgg ggattgagaa cgaaaacaac attcccgaca
     2701 ccggcgtggc ggatttagtg aatgcagtgg acggtattga tgtaattatc gccggccata
     2761 tgcataaaga tgtgccgagt gaaactatca aaaataccct gattaccgaa ccgcaccgct
     2821 acggcacagt ggtttccgaa gttgatcttg cctttgatgt gaatgacaaa ggcgaagtga
     2881 aactactttc taaaaccgcc aaaaccgtac cggtgaagaa actcgcaagc gatccggaaa
     2941 tcgaaaaaat ttaccaaccg tatcacaatg aactgcgtgc cttaaacaac gtcaaaatcg
     3001 gtgaaactgc acaagattta atcccacaag gcaaaatcac ggtgtatcga ttgctttctc
     3061 gcaagacacc ggaatgtcct cattgatcca cgatgtgcaa caacattaca gcggtgcaga
     3121 cgtagtgagt tttgcatttg actacgaaac cgtgcgttta gacaaaggcg acatcaagaa
     3181 aaaagacatc atctacaact accgctatgc cggtggcgat gtgagcatgt atgagctaac
     3241 cggcaaacag cttaaacagt atatggaatg gtcagcggat tacttcgaca ccattcaagc
     3301 cggtgacaaa gactaccgct acaacgctgt gcggggtaaa tctaaatacg ttaccttcga
     3361 cctattcggc ggcgtaagct acaacatcga cctacgcaat ccaagcggta gcaaaattgt
     3421 cgatctaaaa ctggcaaacg gcagtctaat caccgatgac ggcaaataca aagtgggaat
     3481 gaactcctac cgctttggtc agctcaccaa aaaaggcggc atctgggaag gacagtaaat
     3541 ccccgtgatt tgggaatcca aagtcgccat gggggctgaa aaaggcacaa tccaaaatat
     3601 gctgattgat tacatcacca acgtcaaagg cggaaaaatc gaaggcaaat cgcataaccg
     3661 ctgggcgatt atcggcttaa attaacgaaa gggaaacact atgaacttaa aacaatctct
     3721 tattgaaaat aactctattt tgctcaatca atcagcggcg aattgggaag acgcaatcaa
     3781 aatcggcact gatttattag tcaaagccgg tacgattgaa ccacgctatt acgataatat
     3841 tgtaagcaaa atcaaagaga tggggcctta tattattctt gcaccgggct tggcaatgcc
     3901 tcacgcccgt ccggaagaag gtgtgattaa aacctctttc gctttagtga cttttgacac
     3961 cccgatttat tttgagggcg aagatgagcc ggttcacgtt atgctaaccc ttgcagggag
     4021 tgactctgat cagcatatgc aaggcttggt agaaatcacc caagtgctag atgacccaga
     4081 gagcgacaca ggtgttgatt tagataaaat ccgccgctgt aaaacggctg aagaagtgta
     4141 tgcagtaatc gatcaggcat tagcctaata ttctacaagc ggttcaaaaa catcaatatt
     4201 ttgcaaatag aggaatacaa ttatgtccaa accattatta caaattgccc ttgattctct
     4261 ttcactggaa aaagcggtgg cggatgcaaa acaagcagaa aaccaagtcg aaattattga
     4321 atgcggtact attcttgctt ttgctgaggg tatgaaagcc gtttccacct tgcgtgtatt
     4381 gcacccaaat cacattattg tgtgcgactt aaaaaccacc gatggcggtg caattttagc
     4441 taaaatggca tttgaagccg gtgccgactg gctcacggtt tcggctgcgg ctcaccctgc
     4501 aaccaaagcg gcttgcaaaa aagtggcgga cgaatttaac gctgctcacc cggagctaaa
     4561 agtgaaaaaa gagattcaaa ttgaaatcta cggcaactgg acggtggaaa aagatgccaa
     4621 agagtgggta gaattagggg taacccaagc gatttaccac cgctcccgtg atgcggaact
     4681 agcaggtaaa ggttggacaa cggaagatgt tgagttaatg aaacagcttt ctgacttagg
     4741 cattgaatta tctatcaccg gcggtatcgt accggaagat attcacctgt tcaaagagat
     4801 caaaaacgcc aaagccttta ttgcaggccg tgctttagtc ggtgaaaaag gcaaacaaac
     4861 tgccgaagcc attcgtgtgg agattgataa atactggaac taatccggca ttgaaaccca
     4921 ataaaaatgg cgttctctca accggaacgc cattttttat ctcatttttt ctattcttgc
     4981 aaggccgata ttttccacaa tctcgctaca ttttcggcag ttgaaatcag gttctctttg
     5041 cctgatttta acaccgcttc taaattgctg acctgtcgaa taatcggaaa taccgcatca
     5101 atgccgtgtt ggtacaccac agggtaatct tctttcaatg agccaactat cgcaatcacc
     5161 ggcttgccaa actgcttagc gactttcgcc accccaatcg gggttttacc ggcgatagat
     5221 tgagcgtcca ttcgcccttc ccctgtcacc accaaatccg catcggcaag tttctcagca
     5281 agatcggttg cctcaagaat aatttgcacg ccggaacgta atgttacgtt aggcagtagc
     5341 agtaaaccac cgcccattcc accggctgca ccggcaccgg ctttctcggc aatctcaatg
     5401 cctaattggg attttacggt ttcggcaaaa tgcaacaggg cgtggtcgag cattttaacc
     5461 atttccggtg tagctccttt ctgtggccca aaaattgccg aagcccctcg ctcgccacac
     5521 agcggattat cgacatcgca agcaacctca aattccactt gctttaagcg tgaatccaaa
     5581 ccgcttaaat caatctgctg aatttggctt aatgcctcgc caccaaagcc gatttcccgc
     5641 tgttcggcat ttagaaattt cgctcctaag gcttgtagca ttccgacacc gccatcgtta
     5701 gtcgcactgc cgccaatgcc gagaatgatt ttttccaccc ctaaatctaa ggcggcttta
     5761 attaactgcc ccgtgccgta gctggtggta accagcggat ttcgttgctc cattggcact
     5821 aaatgcaagc cacttgccgc cgccatttca ataaaggcgg ttttttgatc ccccgacaag
     5881 ccaaaaaagc cctccacctc atttgcaagc ggtgcaatta cgctgatttt ttgcaaactg
     5941 ccgtgagtgg catcaaccag cgactgtacc gagccttcgc caccgtctgc catcggtacg
     6001 agctgatact ccgcctcagg gaaaacacgg gcaaaaccct gttgaattgc ttgagccact
     6061 tctaatgcgg tcaaactctc tttaaatgaa tccggtgcaa tcacaatttt catcgtcaat
     6121 ccttagagta aaatcaatga aagcagataa accgtgagca tacccaccac acccataatg
     6181 aaagttaggg tagtttgcgt acgatagcct tgttgcggag tcagtttagt aaagtttgtt
     6241 accacccagt agtagctgtc attggcgtgg gaaacgcaca ttgagccagc cgcaatcgcc
     6301 attacggtta aggctgccgc catttcactg gttagcccta aggcgttcat taatgagtcc
     6361 ggtgcgttga acattcccat aatggaggcg gtggtgataa ttgccaccgt tgagctgcct
     6421 tgtgcggttt ttaaaattgc cgaaatcagg aacgggaaga aaatccctgc tgtactgata
     6481 atatgagcgt tttgcttgat gtaatccaca aagccggctt gagtaatcac gttacctagc
     6541 acaccaccgg cggcggtaat aaagagaatt gggccgacta atttcagggt atcattggtt
     6601 aagctgtcaa attccgccat tttaccgctt gaaaccagta ggaaaatagc gaagatcacc
     6661 ccaattgcta acgcaataat cgggttgccg acaaattgta ggaatacgcc gaaatcgcca
     6721 cttacaccgg caattttggc aatcgagccg atagccatta agataatcgg cataaaaatc
     6781 ggggcaaagc ttaaaaaccc acttggtaat ttgccgtatt gtttgatcag atcttcatag
     6841 ctttggctga ttacttgatc cgcttgagct tcttccatca cgctgacttg tttgccaaca
     6901 tatttggcaa agaagtaact ggcaatcaac acaggaatcg aaaccacaaa gcccattccg
     6961 atcacaagca ggagattatg gcttaaacca acagcaccgg ctgctgcaat cgggcccggt
     7021 gtcggaggaa taaagacgtg ggaggcatat aaaccggcac ttaacgccac cgccattccc
     7081 accggattgg caagaatttt tttgcgaata gcttcacgaa tcgggtttaa caccacaaag
     7141 ccgctatcac agaacactgg gataccaacc acccagccca taatcaacat tgccagttca
     7201 gggcgttttt gccccaccac ttttaccacc atatcggcta atttgagggc tgcaccggtt
     7261 ttttctaaaa tcgtgccgat aatcgcccca aaaataatca cgataccgat acttttgaag
     7321 gtattactaa aaccttcgcc cacaatagtt ggaattttgg caagcggtaa acctgccact
     7381 aatgcaaggg ctatcgaaat cgacattaag gctaagaacg ggtgaacttt ccacttcgca
     7441 atcatataaa tcattatgat gatagcgacc agaaagatca gaataagtgc aatacctgac
     7501 ataataagtc tcctcattgt agaaaaatga acttattatt cggtatttat tgctaaaaag
     7561 atttagataa atttgcaaaa aatttgttaa aaacgaccgc ttgtttgtat atttttacaa
     7621 tttttacgac agaaccgctc caagatacag cacaaatttt tgctctatgt tattgaaaga
     7681 taaaccagtt atctgctcaa tcttctctaa acggtaacgt agcgtatttg ggtgaataaa
     7741 caattttttg gcagcgtgat ccagatcaca atttgcgaaa aaatagtaac gcagactttt
     7801 cagtaacacc tgttttttat cggaaaccag taaagcttgg aacggcgaga gcaaggtttt
     7861 cgcttcccaa gagtggctga aactgtgcaa gagggccggc agtttaaaat cttcaaaatg
     7921 aataatctgc ttacggcttt ggatctgctc ggcataattg agggtatggc aggcggtttg
     7981 gtaggaaata tgggtttgcg ataaattttc gaccgccagc ccaaccaccg ttttgaagga
     8041 aatatccgga tcgttaagtt tgtttagtgc attgcggatt aacgattttt cgttggataa
     8101 atgattcagc aaggcaattt tatctaaccc aatcacggcg gtgagtaggc tcgggaaata
     8161 atgttcgaaa aaatcaatca ggcgttggag tttttccgca gtagagccgt gaattttaat
     8221 caccatcacc gacagcggtt ttgcaaaatc ttgcccgaaa aagaccgctt gttgctggat
     8281 ttctgctgtg cttaggctac ctttgagcaa ggcccgcaca aactcttccc gatagcggcg
     8341 ttgccaacgt tcctgttcca actcaaacgc ttgctgcata atcagctccg ccgccatttt
     8401 caccaattga gcatattgcc gaacttgttg tggctgccct gaaatcccca ctacaccaat
     8461 ggttgagcct aaatagtgaa gcggtaagtt aatgcccgct ttcacttcat cgcaccactg
     8521 ttttgcaaga ttttcatcaa tttcgaccgc ttgatcgttg cgtaacgcaa tcaccgctcc
     8581 tgtgtgtcgt tgcccgatac gaccgacatc gccggaagca ataatcaccc cttcactatc
     8641 catcacattg acggagttgg gaataatctg catcgtgcgc ttgacgatgc ggtcggcaat
     8701 cgcttggttg agtttcatta tatgattcct actcattccc aatactatga aaaatccctc
     8761 tttcgaggga tttgcaaatt atctacgctt ccacttcctg agaatagatc atagcgtgaa
     8821 gttattttgc cacagtcgct ttaattaatt tttccgcttt ggcaaggttg ttttctacat
     8881 cagcataatc ggtattagcg tgagccacca cttgatcggc acgatttaac attacttcga
     8941 ccttgccctt gttcggttcg gtaattaaca cttttaacgg taattgcaac gctaacatcg
     9001 gatctttcac cattaatggc gtaccggctt tcggtgtgcc gtaaaccaat acggttgccg
     9061 gttgcatttc taagccggct tgttttgccg ccgcttggtg atcgatttcg gcaaaaatcg
     9121 tcattccttt ttcttttaag gtgttggtta aagttgtgac tgtagtttgg aaatcaaatt
     9181 tactttcaaa taccaccggt ttgacatcgg caatatctgc cattgccacg ctgctcattg
     9241 ctaatgcaga aactgcgact gcttttaagt tcatttcttt tctcctcaaa tagattaaat
     9301 aatcccttgt tcttccaact tgcctaagaa ataaggcatc tgtttacgcc aagtcggcca
     9361 gtcatggtca atatcaaagc cccagtagtc aaaccaagca tcgatccctt ttgcgttaaa
     9421 agcctcttgt aatcggcggg tgtcttcaat atgctgttct tcccacgcac cttgtccgac
     9481 tgcaatcaca tagtgatttt ggcggtagcg gtctaagaac caatcgtcat tttgacccca
     9541 tacataatca atcggcgagt taaaataaac cgctttatcg ccataaaact caccactgaa
     9601 aaagcgagcg tcataaacac cgcttaaggc gatggcaata tcaaacagat ccggatgacg
     9661 taaggcaaag tttaccgtat ggaaagcccc catactacaa ccggtggcaa tcatcgtgcc
     9721 gttccagtgc gattcatggc ggattaacgg cactagctcg tgaataatat aacggtcgta
     9781 agcattatga gctaatgcca tatcgtgtcc ggatttatgt ttagataacc aagattccgc
     9841 atcgtaagaa tcaggcgtgt aaaatttgat taagccacgt tcaataaagg aacggcaagc
     9901 ctcaatcatt ccaaaattac catactcgtt ttcattgccg ccggaggaag ggaaaacaat
     9961 aaccggttta cctgcgtgtc cgtaaacgtt gaacgacatt tcacgaccta attctccact
    10021 ccagtggctt cttttttcaa aatgcatact tcacctctta ctgtttagct tgtgcaaatt
    10081 gtgcaatttc acgcatttgc tccattgttt cggtacgggc taaaatgcct tgttcgccca
    10141 tcactttggc aaatacgccc ggtacgcttt gcacgctgat aatattgccg gcaaatttct
    10201 cacaaacagc ttcaatcgaa ttcacataat tttggtttgc cttgcgggaa atataaacca
    10261 cgttccaagg gtgctgaata tcggcataga atttgttttc tttcacaata ttggcaaatt
    10321 cacggaacac atcgaaatcg ttggcgtagt tccacatatc aatagttaag ccacccggcg
    10381 gacggcagtt gatttcgagt ggtaacaact cttctttttt gctcccttta acacggaaga
    10441 actcaaaatg gaaaaaacgc tcttttacgt taaaggcttt cacacattgt ttgcccattt
    10501 ccactaattt tggcgaaatt tcacatggga catagtagaa catatcgcca tcttttgaaa
    10561 cggtatctaa taccgcttct gaatattcaa ggctggagta gaaaacgata ttgccctctt
    10621 tatcggttaa accgtcaaag gtaataatat cgccgtcaat aaactcttcc ataatatatt
    10681 caaccgttgg cgttttataa ccgaagaaag cttctaactc ttccgcagtt ttgattttgt
    10741 aagtatcgct tgccccaacc cctgaatttg gcttgataat caccgggaat ttaagctgtt
    10801 ttgctaattt gcgggcatct tcatcatctt taaatactcg cccttgtgcc actttcaagc
    10861 cggttttgcg gaatacctct ttcatttggg ctttggtttt aattgagagc atatcatcgc
    10921 tcttataacc aaacacattg aaatcggtac gcaatttcgc atctaactcc agccaatatt
    10981 cattgtgcga ttcaatgcgg tcaattcgcc cgtatttatg ggcaaagtac gcgaccgcac
    11041 gataaacttg ttcgtaatct tccatattat ctacacgata atattcagtc agggaatgac
    11101 gcagattttc gctcaatgat tcataagggg catctgcaat tcccaatgta ttaaaaccgg
    11161 cttcacgcaa acgaatggca aaggtttcaa agttcgttgg gaagtgcggg gaaatcatca
    11221 caaaattaag tggtctagac atagttcttc ctttataaag tttgcatatt attaaaatga
    11281 ttagaataga ttttaggcta aatttattaa ttttcaaaat gtattcacac aagcaataat
    11341 ttttacaa
//
LOCUS       DANLZQ010000090        11071 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.090, whole genome shotgun sequence.
ACCESSION   DANLZQ010000090 DANLZQ010000000
VERSION     DANLZQ010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11071)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11071)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11071
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.090"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(97..1386)
                     /locus_tag="PXE50_002007"
     CDS             complement(97..1386)
                     /locus_tag="PXE50_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HDL5622881.1"
                     /translation="MDSIPLSSLFITLAILLVLSAFFSGSETGLMSLNRYKMRHLAEQ
                     GHKGAKLAEKLLARTDVLLSLILICNNLVNIAASAIATMIGMQLSGEAGVAIATGLLT
                     FVMLVFSEILPKTVAAIYPEKVGFFASFVLTPLKKLLSPIVFLMNLIIAGLMKLLRIQ
                     QKDKQGLSSEELRSVVLDAGKFIPAEHREMLVSILDMEKVTVDDIMVPRNDISGIDID
                     DDWKAIMRQLNHAPHARVIIYKGDMDNNIVGILRVREAFRLMLEKNEFTKEMLLRATD
                     EVYFIPEGTPLTTQLMNFKANKERIGLVVDEYGDIKGLVTLEDILEEIVGEFTTSSAP
                     TLEQEVQQQSDGTVIIEGSANLRDLNKLFDWDLPLEEARTFNGLILEHLEKIPDEGME
                     FELYNLKVMILEVSENMVKQAKVEHLSPKIEKEQDSA"
     gene            complement(1510..2307)
                     /gene="ccsA"
                     /locus_tag="PXE50_002008"
     CDS             complement(1510..2307)
                     /gene="ccsA"
                     /locus_tag="PXE50_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HDL5622882.1"
                     /translation="MLLPLLSIVAYALALLWVAPTLVNLENAATVNKKPNMMLVFGFG
                     LLATILHFSVLYNELFLIEGQNFTVTNVISLMSFIMAACVTLALLKWKTVWFPLIIVY
                     SFAICSVGVAGFVKGSFIRNVQENAGLLFHLGIALFSYALFFLALIYAFQLKWLDRKL
                     KSKTMFFCQILPPLMTVERHFFTLTLAAQAMLTLTLFSGVVYLHNFFEPEHIHKAIFS
                     FLAWLVYSIQLLGQWKLHWRGKRVLIYSISGMMLLTIGYFGSRLIVN"
     gene            2523..3047
                     /gene="yceD"
                     /locus_tag="PXE50_002009"
     CDS             2523..3047
                     /gene="yceD"
                     /locus_tag="PXE50_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005621677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA accumulation protein YceD"
                     /protein_id="HDL5622883.1"
                     /translation="MQKVKLPLTIDPYKDAQRRVDYEGYISGKLLTRLGESVCNVQSD
                     AQVTLSLYVDPQRLTVIKGTAKVDVEFDCQRCGDPFTQTLDCSFVFSPVSNMDQADIL
                     PEIYEPIEVNEFGEVNLLDMIEDEFILELPLVPMHSEEHCEVSVSEQVFGELPEELVQ
                     KPNPFAVLANLKKN"
     gene            3064..3234
                     /gene="rpmF"
                     /locus_tag="PXE50_002010"
     CDS             3064..3234
                     /gene="rpmF"
                     /locus_tag="PXE50_002010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006231206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HDL5622884.1"
                     /translation="MAVQQNKKSRSRRDMRRSHDALTTAAVSVDKTSGETHFRHHVTA
                     DGYYRGRKVINK"
     gene            3253..4275
                     /gene="plsX"
                     /locus_tag="PXE50_002011"
     CDS             3253..4275
                     /gene="plsX"
                     /locus_tag="PXE50_002011"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HDL5622885.1"
                     /translation="MVDITLAVDVMGGDFGPRVTIPALEKALKQNPSLSFLLFGDEHQ
                     IAPLLQKHTLLNHPKIQIHHTEQVIEADVPFTTAIRQSKNSSMRLAIEAVKEGKAQGC
                     VSGGNTGALMGLAKLLIEPLPNIERPALTSLIPTLNGKSSVMLDLGANIEVSNHQLQQ
                     FAEMGNLFAQVMLDLVYPRLSLLNIGTEENKGTAQLQAVHQLLKNRQDLNYTGFIESD
                     KLTSYLTDVIICDGYTGNIALKALEGAAKNIISLFKKEKADSNICRNTKRYLLKAMFY
                     RYYRKLQQINPDRHNGATLLGLSKVVVKSHGGANINAFYYAIDYAVQQIQGDIPNKIL
                     EGLTQK"
     gene            complement(4372..5655)
                     /gene="hisD"
                     /locus_tag="PXE50_002012"
     CDS             complement(4372..5655)
                     /gene="hisD"
                     /locus_tag="PXE50_002012"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HDL5622886.1"
                     /translation="MQTLIWNNLTETEQQQYLARPAQVVGESIKAAVNEIKANVIANG
                     DKALFELAEKFDKVKLESLVVSEQQIQQAQSRISPELKQAIQNAKANIEAFHKAQQNQ
                     EVDIETQPGVCCQVITRPINAVGLYIPGGSAPLFSTVLMLAVPAKIAGCNKIVLCSPP
                     PIADEILYTAHLCGVETIYAVGGAQAIIAMANGTQTVAKVDKIFGPGNAFVTEAKRQV
                     VQEGTAIDMPAGPSEVLVIADEFADPAFVASDLLSQAEHGADSQVILVTPSESLARAV
                     DEELEKQVAVLPRAETARKALAHSRTFIAENLQQAVEISNKYAPEHLIVQTENARSLL
                     ADLDNAGSIFLGAYSPESMGDYASGTNHVLPTYGYTKTYSSLGLADFSKRMTVQELTP
                     QGFLALAETVERMASAELLDAHRNAVSLRVAKLKG"
     gene            complement(5667..6566)
                     /gene="hisG"
                     /locus_tag="PXE50_002013"
     CDS             complement(5667..6566)
                     /gene="hisG"
                     /locus_tag="PXE50_002013"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HDL5622887.1"
                     /translation="MTTQNRLRIAMQKKGRLSQECSELLKQCGVKIIWNDQRLIAYSE
                     NMPIEILRVRDDDIPGLVFDGVVDLGIIGENVLEEVELGRLSAGENVAYKKLRQLDFG
                     GCRLSLAIDRDKNYNNIKDLEDAVIATSYPNLLKRYMKEQNVPFKSILLTGSVEVAPS
                     AGIANAICDLVSSGATLEANGLKEVEVIYRSTACLIQRQEPLSAEKQALVDKLLTRIQ
                     GVQQANESKYIMLHAPKDKLAEITALLPGVENPTILPLANDQTRVAMHVVSQENLFWE
                     TMEQLKEMGASSVLVLPIEKMLA"
     misc_feature    complement(6599..6726)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00514"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="His leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00514"
     gene            6925..7782
                     /locus_tag="PXE50_002014"
     CDS             6925..7782
                     /locus_tag="PXE50_002014"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HDL5622888.1"
                     /translation="MQISLKKIYSGKVRDLYEIDEKRMLMVATDRLSAFDVILDDPIP
                     RKGEILTQISNFWFNKLAHIMPNHFTGDSVFDVLPQEEAEAIQHRAVVCKRLIPVKIE
                     SIVRGYLTGSGLKDYQQTGTICGLTLPEGLVEASKLPQPIFTPSSKAEVGDHDINISY
                     EECERQIGQELAAKVRDAALKLYTEAANYALTKGIIICDTKFEFGLDENGELTLMDEV
                     LTPDSSRFWSVETYREGTNPPSFDKQFVRDWLENSGWNKQPPAPKIPAEVIEKTVAKY
                     QEALDLLTK"
     gene            complement(7923..9404)
                     /gene="ilvC"
                     /locus_tag="PXE50_002015"
     CDS             complement(7923..9404)
                     /gene="ilvC"
                     /locus_tag="PXE50_002015"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HDL5622889.1"
                     /translation="MANYFNTLNLRQKLDQLGRCRFMDRDEFADGCNFLKGKKIVIVG
                     CGAQGLNQGLNMRDSGLDIAYALRAEAIAEKRASFKRASENGFVVGTYEQLIPEADLV
                     INLTPDKQHSKVVADVMPLMKQGAAFGYSHGFNIVEEGEQIRPDLTVVMTAPKCPGTE
                     VREEYKRGFGVPTLIAVHPENDPKGEGLAIAKAWASATGGDRAGVLESSFVAEVKSDL
                     MGEQTILCGMLQAGSIVCYDKLVSEGKDPAYAGKLIQYGWETITEALKQGGITLMMDR
                     LSNSAKLRAFELSEQIKEELAFLFEKHMDDIISGEFSSTMMADWANGDANLLKWREET
                     GKTAFENAPQADGIKISEQEYFDNGVLMVAMVKAGVELAFDTMVSAGIYEESAYYESL
                     HELPLIANTIARKRLYEMNVVISDTAEYGNYLFSHVATPILAEKIIPTLEKGDLGEPT
                     PAVEIDNVTLRDVNDAIRNHPIELIGQELRGYMTDMKRISSQG"
     gene            9626..10861
                     /locus_tag="PXE50_002016"
     CDS             9626..10861
                     /locus_tag="PXE50_002016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HDL5622890.1"
                     /translation="MKINRIILQSCSECGQQVRVPLTSNGNAVCPVCHNILRKSNTWS
                     LHRSAFLALAILILLPFALTFPLMSIDLLGIKINATVWDGIWKMATEGYPYTAFMVLV
                     CAVIMPIAFVLLILTIQLQRIIRQRPRYTLIFLTKIKEWVMLDVYLVALAVAAFKIRD
                     YADLQFDINLIAFVLVTLLNTLLFIKTEPKQAWERFYPEYHALPFDHPSNPTLCPTCE
                     YCFDETILDLKGRQRCPRCESNLSISDNVKIQRVWACLIAGTIMMIPANIFPISTTEL
                     AGQVSADSLMSGVLLFMEMGSYTVAAIVFIASIAVPVSKITIIFYLLLAIHYKWKHPI
                     HWQMKLLHYVHFVGRWSMLDLFVLSLMMSLLERGQILSFSVGEAAFYFGAAVFLTMFA
                     SANLDSRMLWKIHTVQKTS"
BASE COUNT         3306 a         2467 c         2081 g         3217 t
ORIGIN      
        1 aaaagctacc agcataatta tttatattaa aattaacaaa aaaataacac attatttgta
       61 caaataatgt gttatttact ttcttttttc ttaaaattag gctgaatctt gctctttttc
      121 aattttcggt gaaagatgtt caactttcgc ttgtttaacc atattttcac tcacttcaag
      181 aatcatcact ttcaagttgt agagttcaaa ttccattcct tcatcaggaa ttttttctaa
      241 atgctctaaa atcaagccgt taaaggttct ggcttcctca agcggtaaat cccaatcaaa
      301 tagtttgttc agatcacgca ggttggctga gccttcaata atcaccgtac catctgattg
      361 ttgctgaact tcttgctcaa gggtcggtgc tgatgaagtc gtaaattcac ccacaatttc
      421 ttctaaaata tcttcaagag tgactagccc tttaatatca ccatactcat caaccactaa
      481 accaatacgc tctttattcg ctttaaagtt cattaattgt gtagtgagtg gtgtgccttc
      541 aggaataaaa tagacttcat ctgttgcacg cagtagcatt tctttggtaa attcgttttt
      601 ctccaacatt aaacgaaagg cttcacgcac ccgcaaaatc ccaacaatat tgttgtccat
      661 atcccctttg tagataatca cccgagcgtg aggggcgtga ttaagctgac gcataatcgc
      721 tttccagtca tcatcaatat caatgccgct gatgtcgttg cgaggcacca taatgtcatc
      781 aaccgtcact ttttccatat ctaaaataga gaccaacatt tcacggtgtt cggcaggaat
      841 aaatttaccg gcatcaagca ctacactacg cagctcttcg gagcttaagc cttgtttatc
      901 tttttgttga atccgcaata atttcatcag cccggcaata atcaaattca ttaaaaatac
      961 aatcgggctg agtaattttt taagcggtgt tagcacaaag ctggcgaaaa aaccgacttt
     1021 ttcagggtaa attgccgcta ctgttttagg taggatttcc gaaaaaacca acattacaaa
     1081 agttagcaaa ccggttgcaa ttgccacacc ggcttcaccg gataactgca taccgatcat
     1141 cgttgcaatc gcagaggcgg caatgttgac taagttatta caaattaaga taaggctaag
     1201 tagcacatcg gtgcgtgcca agagtttttc cgccagtttc gcccctttat gcccttgctc
     1261 ggcaaggtga cgcattttgt agcggtttaa agacatcaag ccggtttccg agcctgaaaa
     1321 aaatgcagag agtactaaaa gaatagctaa ggtaataaat aaactactca ggggaatact
     1381 gtccaaaatt caattcctat gtaaattaat cataaaaggt agcgtaacac taaaagcgtt
     1441 gtcactacct cactttgtcg gttcagccga cttgcaaaaa attttgcttt tttgaccgct
     1501 tgtagatcat taattgacga tcaaacgact accgaaatag ccgatggtga gcaacatcat
     1561 acccgaaatc gaataaataa gcacccgttt tccacgccaa tgtaatttcc actgtccaag
     1621 taactgaatg ctataaacaa gccaagctaa aaaggagaaa attgctttat gaatatgctc
     1681 cggctcgaaa aagttatgca aataaaccac accggaaaat aaagtgagcg tcagcatagc
     1741 ttgtgcagct aaggttaaag taaagaaatg gcgttcaacc gtcattagcg gtggtagaat
     1801 ctggcaaaag aacattgttt tgctctttag ttttctatcc agccatttga gttgaaaagc
     1861 ataaattaat gctaaaaaga agagagcata agaaaataat gcaatcccta aatggaaaag
     1921 cagtcccgca ttttcttgca cattacggat aaaactacct tttacaaatc cagccacccc
     1981 cacactacaa atggcgaaag agtacacaat aattaaagga aaccaaaccg ttttccattt
     2041 taacaacgca agtgtgacac aagccgccat aatgaaactc atcaaagaga ttacatttgt
     2101 taccgtaaaa ttctgccctt cgattaaaaa taattcatta tataacacag aaaaatgcaa
     2161 aatcgtggca agtaacccaa acccaaagac taacatcata ttaggctttt tattaactgt
     2221 tgcggcattt tctaaattca ctagagtagg ggcaacccaa agtagcgcta gagcgtaagc
     2281 aacaatggat aaaagaggaa gtaacatatt gtctcgaatc tcgtcaaata agaataacta
     2341 tcagaatttt aatcaaaagt aaccgtttta gctagttttt gctgttgcta gatcaaaaat
     2401 tatcctaaaa aatgtgcttt tcgccttaaa ttgaacccta ccttttctcg gtaagattat
     2461 ctcactgaaa acaataattt tcctttgact aatttgcttt ctatctgtaa tatgcacacc
     2521 ctatgcaaaa ggtaaaacta ccccttacga ttgaccctta caaagatgct cagcgtcgcg
     2581 ttgattatga aggctacatt tcaggtaaac ttctaacacg cttgggtgaa tcagtatgta
     2641 atgtgcaaag tgatgcacaa gtcactctct cgttatatgt cgatccacaa cgcctaactg
     2701 tgattaaagg cacagcaaaa gtagatgtgg aatttgattg ccaacgatgt ggtgacccgt
     2761 ttacacaaac gctcgactgt tcatttgttt tcagtccggt gtctaacatg gatcaggcgg
     2821 acatcttgcc cgaaatttat gaacctatcg aagtaaacga gttcggtgaa gtaaatttac
     2881 tagatatgat tgaagatgaa tttattcttg aattacctct agtcccgatg catagtgaag
     2941 aacactgtga agtgtccgta agtgaacagg tatttggcga gttgccggaa gaactggtac
     3001 aaaaaccaaa cccgttcgca gtattagcta atttaaagaa aaactagatc taggagaaag
     3061 cccgtggctg ttcaacaaaa taagaaatct cgttcacgtc gtgatatgcg tcgttcacac
     3121 gatgcattaa caactgcagc agtttcagta gataaaacca gtggtgaaac tcactttcgc
     3181 caccacgtaa ctgcagacgg ttactaccgt ggtcgtaaag taatcaacaa gtaattcctt
     3241 tcgaggttta tcttggttga tatcactctt gcagtagatg tgatgggcgg ggactttggt
     3301 ccccgcgtta ctattcctgc actggaaaaa gccttaaaac aaaatccaag cctttctttt
     3361 ttattatttg gtgatgaaca ccaaatagcc cctttattac aaaaacacac actactcaac
     3421 caccccaaaa tccaaattca tcataccgaa caagtgattg aagctgatgt tccgttcact
     3481 actgcaatcc gccaaagcaa aaacagctct atgcggttag cgattgaggc agtaaaagag
     3541 ggcaaagcac aaggttgtgt tagtggcggt aacactggtg cgttaatggg attggcaaaa
     3601 ttattgattg aaccattacc aaatattgaa cgccctgcac tcacttcgct aattcctacc
     3661 ctcaacggca aatccagcgt aatgttagat ttaggggcaa atattgaagt aagcaatcac
     3721 cagctacaac aatttgcaga aatgggaaac ctgtttgctc aagtaatgct tgatttagtt
     3781 taccctcgcc tgtctttatt gaatattggt acagaagaaa ataaaggcac ggcacaactt
     3841 caggcagtgc atcaactgct gaaaaacaga caagacttaa attacaccgg ctttattgaa
     3901 agcgataaat taaccagcta tctcactgat gtgattattt gtgacggcta caccggcaat
     3961 atcgcgttaa aagcgttgga aggggcagct aaaaatatta tttctctctt taaaaaagag
     4021 aaagccgatt ccaatatttg ccgtaacacc aaacgatatt tactgaaagc gatgttctac
     4081 cgttactacc gcaaattgca acaaattaac cctgaccgcc ataacggtgc gaccttgctc
     4141 ggcttatcta aagtagtcgt gaaaagccac ggcggggcaa atatcaatgc cttttattac
     4201 gctattgatt atgcggtgca acaaattcaa ggcgacattc caaataaaat cctagagggt
     4261 ttaacccaaa aataagcgaa ctcaactgtt cgcttatttt catttcttgt ttcacttaaa
     4321 gatacaagcg gtcaaatttg caaaaaaatt tacccattca accgcttgtg tttagccttt
     4381 taattttgcc actcgtaaac taaccgcatt gcggtgtgca tctagcaatt ctgcacttgc
     4441 cattcgttcc accgtttcgg ccaaggctag aaagccttgt ggtgtcagct cctgcaccgt
     4501 cattcgcttg ctaaaatcag ctaaacctaa gctcgaatag gttttagtgt agccgtaagt
     4561 cggtaaaacg tggttagtgc cgctagcata atcccccata ctttccggcg aatacgcccc
     4621 taagaaaatc gagccggcat tatctaaatc cgccaacaac gagcgagcat tttcagtttg
     4681 cacaattaaa tgctcgggtg catatttatt actaatttcg accgcttgtt gcaggttttc
     4741 cgcaataaaa gtgcgactgt gagccaatgc tttacgggca gtttcggcac gaggtaaaac
     4801 cgccacctgc ttttctaatt cttcatcgac tgcccttgcc aagctctcac ttggtgtgac
     4861 taaaatcact tgggaatcgg ctccatgttc tgcttgagag agtaaatcgc tcgccacaaa
     4921 tgcagggtca gcaaactcat cggcaatcac caacacttcc gacgggcctg ccggcatatc
     4981 aatcgccgtg ccttcttgca caacttggcg tttcgcctcc gtcacaaacg cattgcccgg
     5041 gccgaaaatt ttatccactt tcgctaccgt ttgtgtgcca tttgccatcg caataatcgc
     5101 ttgagccccc ccaactgcgt aaatcgtttc caccccacac aaatgggcgg tgtagagaat
     5161 ttcatcggca atcggcggtg gtgagcaaag cacaatcttg ttacaaccgg caatttttgc
     5221 cggcactgca agcattaaca cggtagagaa aagcggggct gaaccgcccg gaatataaag
     5281 ccccaccgca ttaatcgggc gagtgatgac ttggcaacac acccccggct gggtttcaat
     5341 atccacctct tgattttgct gtgccttgtg gaaagcctcg atattcgctt tcgcattttg
     5401 aatcgcttgc ttaagctctg gtgaaatacg gctctgtgct tgctgaatct gctgttctga
     5461 tacaactaag ctctctaatt ttactttatc gaacttttca gctaattcaa ataatgcctt
     5521 atcgccgttg gcaattacat tcgctttaat ttcattaact gccgctttaa tactctcgcc
     5581 aaccacctgt gccggacggg caagatattg ctgctgctca gtttctgtta aattgttcca
     5641 aattagggtt tgcatattta ttccttttac gccaacattt tctcaatcgg taaaaccaat
     5701 acggaacttg cgcccatttc ttttagctgc tccattgttt cccagaacag gttttcttgg
     5761 ctgacaacgt gcattgccac acgggtttgg tcgttagcta acggtaaaat agtcgggttt
     5821 tccacaccgg gtaataaagc ggtaatttcc gccagtttgt ctttgggggc gtgcagcata
     5881 atatacttag attcgttcgc ctgttgcaca ccttgaatgc gggttaataa tttatccact
     5941 aacgcttgtt tttccgctga aagtggttct tggcgttgaa ttaggcaagc agttgaacgg
     6001 taaatcactt caacctcttt taatccgttc gcctctaatg ttgcacctga agaaaccaag
     6061 tcacaaatcg cattcgcaat tccggcactt ggagcaactt caaccgaacc ggtgagtaaa
     6121 atacttttaa acggcacatt ttgctctttc atataccgct ttaataaatt ggggtaagaa
     6181 gtggcaatca cagcatcttc taaatctttg atattgttat aatttttatc acgatcaata
     6241 gctaacgata aacggcagcc accaaaatct aactgacgaa gttttttata ggcaacattc
     6301 tcaccagcac ttaatcgccc taattccact tcctctaata cattttcacc gataatccca
     6361 agatcaacta cgccgtcaaa aactaagcct ggaatgtcgt catcacgcac ccgtaaaatt
     6421 tcaatcggca tattttctga ataggcaatc aggcgttgat cgttccaaat gattttcacg
     6481 ccacattgtt taagcaactc actacattct tggcttaagc gacctttttt ctgcatcgca
     6541 attcttaatc gattttgtgt tgtcattgtt gtttccttct tatgttttaa attgtaaaaa
     6601 taaaaaaacc tctcgaaatc acttccgaga gggttaaatt tatgctgcgt ttaggcgtac
     6661 tcggaagtct tatcttccgc acataccaaa tgcccgaaag attattcagg taaatgatgg
     6721 tggtgatgag tacgaataaa agccattttg ttgttctcca aactaaattg ctttaaaaga
     6781 tacgcttaaa ttttggcaat gacaagtgtt ttttgcgaaa aaattgctat ttttcatctc
     6841 tctaaaacaa ctatcgcaaa cgtttgcgta aagcggtata atttgcctga ttttttgcaa
     6901 attcaacaaa gtaggaataa cactatgcaa atcagcctca aaaagatcta ctccggcaaa
     6961 gtccgtgatc tctacgaaat cgatgaaaaa cgtatgctta tggttgccac cgaccgatta
     7021 tctgcctttg atgttatttt agacgatcct attcctcgta aaggcgaaat cctcacccaa
     7081 atctccaact tctggttcaa caaattagcc cacattatgc caaaccactt caccggcgac
     7141 agtgtgtttg acgtgttacc gcaagaagag gcagaagcta ttcaacatcg tgcggtggtt
     7201 tgcaaacgct taataccggt gaaaattgaa tcgattgtgc ggggttattt aaccggctcc
     7261 gggctgaaag attaccaaca aaccggcacg atctgcggct taacattgcc ggaaggcttg
     7321 gttgaggcca gcaaattacc gcaaccgatc ttcacaccgt ccagcaaagc cgaggtgggc
     7381 gatcacgata ttaatatcag ctacgaagag tgtgaacgcc agatcggtca agaacttgcc
     7441 gccaaagtgc gtgatgccgc tctaaaactc tacactgaag cggcaaacta tgccctgacc
     7501 aaaggaatta ttatttgcga caccaaattc gaattcggct tagacgaaaa cggtgaacta
     7561 acgctaatgg acgaagtcct aaccccggat tccagccgtt tttggtcagt tgaaacctac
     7621 cgagaaggca caaatccacc ttcatttgat aaacaattcg tgcgtgactg gctggaaaat
     7681 agcggttgga acaaacaacc cccagccccg aaaataccgg cagaggtaat tgaaaaaacc
     7741 gtagcgaaat atcaagaagc attggattta ttaaccaaat aacaccacaa gcggtcaaat
     7801 ttacgctatt ttttgcaaaa caaaaacctg taagccaaca cttacaggtt ttttagttag
     7861 tggtaaaaag tgcggttatt ctaccgcact tttgcaaaat tttgtgtaaa tctgaccgct
     7921 tgttagcctt gcgaagaaat acgtttcata tctgtcatat aaccacgtaa ttcttgaccg
     7981 attaactcga ttgggtggtt acggattgcg tcattcacat cacgtaaggt aacgttgtcg
     8041 atttccactg ccggagttgg ttcacctaaa tcgcctttct ctaacgttgg gataattttc
     8101 tccgctaaaa tcggggttgc aacgtgagag aataagtagt taccgtattc tgcggtatct
     8161 gaaattacca cgttcatttc atataaacgc ttacgagcga ttgtatttgc gattaacggt
     8221 aactcgtgta gagactcgta gtaagccgat tcttcataaa taccggctga aaccattgta
     8281 tcaaaggcta attcaacccc tgctttcacc attgcaacca ttaacacacc gttatcaaag
     8341 tattcttgct cagaaatttt aataccgtct gcttgtggtg cgttttcaaa ggctgtttta
     8401 cctgtttctt cacgccattt taataagttg gcatcgccgt ttgcccagtc tgccatcatc
     8461 gttgatgaga actcaccact gatgatgtcg tccatatgtt tttcaaataa gaacgctaat
     8521 tcttctttga tttgctcaga aagctcgaac gcacgcaatt tggcactgtt tgataagcga
     8581 tccatcatta aggtgatacc gccttgtttt aacgcttcgg taatggtttc ccaaccgtat
     8641 tggatcaatt tacctgcgta agccggatct ttaccttccg acactaattt gtcgtagcac
     8701 acgattgaac ctgcttgtaa cataccgcaa agaatggttt gttcacccat taaatcagat
     8761 ttcacttctg ctacgaatga agattctaat acgcccgcac ggtcaccacc ggtagcactt
     8821 gcccacgctt tcgcaatggc taaaccttcg cctttagggt cattttccgg gtgaacggca
     8881 attaaggttg gcacaccgaa accacgtttg tactcttcac gcacttccgt gcccgggcat
     8941 ttcggagcgg tcatcacaac cgttaaatcc ggacgaattt gctcaccttc ttccacaatg
     9001 ttgaaaccgt gtgaataacc aaatgccgca ccttgtttca ttaacggcat tacatcggca
     9061 actactttag agtgctgttt gtccggcgtt aagttaatga ctaaatccgc ttcaggaatt
     9121 aattgctcgt aagtacccac cacaaagccg ttttcagaag cacgtttaaa tgaagcacgt
     9181 ttttcagcaa tcgcttcggc acgtaaagcg taagcaatat ctaagcctga atcacgcata
     9241 tttaaacctt ggtttaaacc ttgagcacca caacccacaa tcacgatttt tttgcctttt
     9301 aagaaattgc agccatctgc aaattcatca cgatccataa agcggcaacg acctaactgg
     9361 tctaattttt gacgtaaatt taaagtgttg aaatagttag ccatttttta atccttattt
     9421 gaattaatga gattgatatg atgttttgtt tgcacattgt tatagtttga tttgattata
     9481 ccttaaccta acattgcgta aattgaaaat attaatattt catattgcat aaaatgcaac
     9541 ttgcaaaaat tttgccaaat ttaaccactt gcaatctcta cgataaagta gaaaataacc
     9601 acctaattta atagaagatc aaaaaatgaa aataaacaga atcattttac aaagctgtag
     9661 cgaatgtggg caacaagtgc gagtcccgct cacgtcaaat ggcaatgccg tttgcccggt
     9721 ctgccataat atattacgca aaagcaatac ttggagcttg caccgtagtg cttttttggc
     9781 attagccatt ttaattttgc ttcccttcgc acttactttt cccttgatga gcattgactt
     9841 actcggcatc aaaattaatg ctaccgtatg ggacggtatt tggaagatgg caacggaggg
     9901 ctacccttac accgctttta tggtgctagt ctgcgcggta ataatgccga ttgcatttgt
     9961 attgctaatt ttaaccattc agctacaacg tattattcgc caacgccccc gttacacgct
    10021 gattttctta actaaaataa aagaatgggt aatgcttgat gtctatttag ttgctcttgc
    10081 ggttgccgct tttaaaattc gagattatgc cgatctacaa ttcgatatca acttaatcgc
    10141 ctttgtgttg gtaacactct taaacaccct actttttatt aaaaccgagc caaaacaagc
    10201 atgggaacgt ttttacccag aatatcacgc cttgccgttt gatcacccaa gcaatccaac
    10261 actttgcccg acctgtgaat attgctttga tgaaactatt ttagacttaa aaggacggca
    10321 acgctgccct cgttgtgaaa gcaatttatc tatttccgac aacgtaaaaa tacaacgggt
    10381 ttgggcttgc ttaattgcag ggactattat gatgattccg gcaaatattt tcccgatttc
    10441 gacaactgaa ctggcaggtc aggtttcggc agattcatta atgtccggcg tgcttctgtt
    10501 tatggaaatg ggtagctaca ccgtggcagc gattgtgttt atcgctagta ttgcggtgcc
    10561 ggtgagcaaa attaccatta ttttttatct cttgctggca attcattaca agtggaaaca
    10621 cccgattcat tggcaaatga aactactaca ctacgtccat tttgtcggac gctggtcaat
    10681 gctggattta ttcgtgttat cattgatgat gtcgctactc gaacgagggc agattctcag
    10741 tttctcggta ggggaagccg ctttctattt tggagcagcc gtattcttaa cgatgtttgc
    10801 ctctgcaaat ttagattcca gaatgttgtg gaagattcat actgtccaga aaacatccta
    10861 aataaagatt ttccgataaa taatacataa catgcaaagt aagaaaagta gtacgtaacc
    10921 caaaatctca atccctattg agtaagaaag agccgataat gtagcaccga tagccagaaa
    10981 gaaattagca aatataaaat agtctttact atatttactt gaggcaatta gggtatccat
    11041 tgcagtacta aagaacattt ccaaatacgt g
//
LOCUS       DANLZQ010000091        10300 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.091, whole genome shotgun sequence.
ACCESSION   DANLZQ010000091 DANLZQ010000000
VERSION     DANLZQ010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 10300)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10300)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10300
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.091"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..731
                     /locus_tag="PXE50_002017"
     CDS             <1..731
                     /locus_tag="PXE50_002017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sialidase"
                     /protein_id="HDL5622891.1"
                     /translation="FTRYIQKARKFNEYNTDILYRSFDNFFAHYDTGVKHNNLSLGLN
                     TKLSENLRGGLFFEYSNKNRNSVQIGARAKYEMDNHQLSGFLRYRGVKHKDMLARNNS
                     VDGYLNYAYRIQLDDKLSISPSVGAYVSRSSRSLIDEDLAINSRTVYASDVGLNIHYK
                     LNDIDAYIRPSIGFVNGDITLSQSNDMTNTYKIKDKSNVYSVTTGLKKRFANGVALGA
                     DFKLHRYGSQTTESNFGLNVSYNW"
     gene            complement(898..1434)
                     /gene="hpt"
                     /locus_tag="PXE50_002018"
     CDS             complement(898..1434)
                     /gene="hpt"
                     /locus_tag="PXE50_002018"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HDL5622892.1"
                     /translation="MEKHHIETLHSKEEVLNRINELAKEINQHYHQKQCQNLVVVGLL
                     RGSFMFMADLVRKLELPVEVDFLTASSYGSSTESSRDVKILKDLDGEIQGKDVLIVED
                     IIDTGFTLSKVGEILKLREPNSLAICTLLDKPCRREVDVPVKWVGFEIPDEFVVGYGI
                     DYAQKYRHLDYIAKVVIE"
     gene            complement(1473..2822)
                     /gene="pmbA"
                     /locus_tag="PXE50_002019"
     CDS             complement(1473..2822)
                     /gene="pmbA"
                     /locus_tag="PXE50_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HDL5622893.1"
                     /translation="MSITDKQTLLQQEQELRQAVEFALNFAKQAGAEAEVGVTKVAGL
                     SVSSRLEQVENIEFNNDGSLGISVYLGKRKGNASTSDLQPESIQKTVEAALAIAKYTS
                     EDACTGLADKELLAFEAEDLELYHQADISVDQAVELAIEAEHYALNADEKIVNSDGAT
                     FNSHSGVRVYGNTHGMLQSYLSSRYSLSCSVISAYEDQLERDYEYTIFREFDKLQAPK
                     WVGEQAAIKAVDRLNPQRIKTGEMSVIFYNDVATGLVGHLAGAISGGALYRKSSFLLD
                     KLGEQILPEWFAISERPHLLRQLASSAFDSEGVITQNREIITDGVLQTYLMTSYSGRK
                     MGLKSTGHAGGIHNWLVKPNRQGGLNTLLKEMGTGLLVTEMLGSAINSVTGEYSRGAA
                     GFWVENGEIQYPVAEITIAGQLQDMYKNLVAVGDDIEHRSNIQTGSILLEKMMVSGE"
     gene            2921..3451
                     /locus_tag="PXE50_002020"
     CDS             2921..3451
                     /locus_tag="PXE50_002020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein"
                     /protein_id="HDL5622894.1"
                     /translation="MAKKRSKNEIDWTDEEEEIIWVSKSEIKRDSEHLKKIGAELIEL
                     TPQNLEKIPLDDDLKEAIRQAQGFKMEARRRQIQFIGKLLRNRDQEPIQEALDKVKNR
                     HNQQQALLHKLELVRNQLIAMGDASLDNLLTEYPQLDRQHLRNLIRGAIKEREANKPA
                     KNYREIYQYLKTEIVE"
     gene            3457..3828
                     /locus_tag="PXE50_002021"
     CDS             3457..3828
                     /locus_tag="PXE50_002021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB2 family protein"
                     /protein_id="HDL5622895.1"
                     /translation="MEYLSTILKAHIGLAYISLILLLTRGFLSSKMVDWRQYKILRIA
                     PHAVDTFLLITGIAAVAIFLAYDFFTLAQFSWLLPKLLFLVLYIVFATKAFKKGQPFS
                     LKFYLLAVVSFLLMMLTATFH"
     gene            3841..4554
                     /locus_tag="PXE50_002022"
     CDS             3841..4554
                     /locus_tag="PXE50_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF554 domain-containing protein"
                     /protein_id="HDL5622896.1"
                     /translation="MIGPFVNAGAIILGGVLGACLGSHLPERIRTTLPLVFGLCCFGL
                     GMMLTASVKYMSAVALALILGTIIGELIYLENRIGKVAGLARGLIDRLFPPVHSLSQE
                     EFLEKFIALLVLFCVSGTGIFGAIKEGMTGDPSILYIKSILDFFTAMIFAASLGYAIA
                     AIAVPLIIVQGILILLATVIMPLTTANMMADFSATGGLLLFATGFRICGIKNFPVANM
                     LPALLLAMPMSYFWEWLVH"
     gene            4557..5120
                     /locus_tag="PXE50_002023"
     CDS             4557..5120
                     /locus_tag="PXE50_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HDL5622897.1"
                     /translation="MKKRIIVGISGASGFQYGYKVLELLKPFSEIETHLVISKGAELT
                     RTLETDYTREALHDLADQIHSLNNVGASIASGSFKTEGMVIAPCSMRTLAAIANGLSD
                     NLLTRAADVVLKERRKLVLMVREAPLNLAHIDNMRKVTEMGGIIFPPIPAFYQKPTSL
                     DEMVTHSVSHALSLLDIDIPNTPHWGE"
     gene            5183..5623
                     /locus_tag="PXE50_002024"
     CDS             5183..5623
                     /locus_tag="PXE50_002024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HDL5622898.1"
                     /translation="MHNPIPTHILDFIQTNHVVNIAAHTEQDFWAANCFYAFDQENVR
                     LIILTAKKTRHAGLMLENPHIVGTICGQIEKINEIEGVQFSATAECLEDKQAEKAALQ
                     IYYQKHPLARLKPSDVWVLSFNTIKHTGNKLMFAKKTIWERNII"
     gene            complement(5627..6502)
                     /locus_tag="PXE50_002025"
     CDS             complement(5627..6502)
                     /locus_tag="PXE50_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5622899.1"
                     /translation="MMKTILIDEANQIKGFSHLYRLRSDLMLKYTEISVTETVEQEPA
                     EFEAGLRLVILLSGRSEIDFNSEVFELDASLKPQAAFLPLNRAEMGRKIFRKGQLQKE
                     LVIFLYPKWLIESQLNLASYHHFKQHLKAHQIILTQSMLKLIHDIVSEQEMQPFGLLE
                     KEGNLLALLASAFSQLTQAPRLKKDRVQQLTELLESGKFDGWSLKQIAIYFHTNVTTL
                     QNEFQHYHKTSIFAYLRRSKLEQAYKLLLQGQSITQAAEFAGYANSENFSTAFKRTFG
                     ITPSQIKRDKAKGII"
     gene            6608..8683
                     /locus_tag="PXE50_002026"
                     /pseudo
     CDS             6608..8683
                     /locus_tag="PXE50_002026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249230.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
     gene            8727..10163
                     /locus_tag="PXE50_002027"
     CDS             8727..10163
                     /locus_tag="PXE50_002027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3327 domain-containing protein"
                     /protein_id="HDL5622900.1"
                     /translation="MKKTTACILTFLVSSVLYANNITIELKQNDFVQGKLIQKAQQPL
                     SLSIIFPDQSSRLLAQNVFGEQDFMFKSELIGTATFSILANGATVSDQDFTLTIERHI
                     PISAQIAPPKVIENTQLEELSQKIAKNPEKQTALINDFWDKAKQAGTPLIEPLDEQQS
                     RVTFLWRGATKNARIWGGVSTEHDFMQRFGETDIWYKSYIVPNDTLVEYKLAPDVPTL
                     PVDENTQRRALLATAQADPLNKTAYFEKIGQNIHNTDKFNYASLLKLPNAPTQSFLTE
                     APNIAKGKLQQLIFESATLGNKHRLFVYLPDGFSAEKNYAVLYLFDGVEYTERVPTKT
                     ILDNMIAQKVILPTVAVFIENPSSESRRVELPANPIFTQVLAKELVPFVEKQLNIKTK
                     ERIIGGSSYGGLSSAYTVLNYPNVFSKALILSGSFWWQPKGTPSEQSHYIAQQFIQKE
                     KLPLCFFISAGFYESGKSAICKRSNYFA"
BASE COUNT         3179 a         2087 c         1910 g         3124 t
ORIGIN      
        1 acttcactcg ctacatccaa aaagcgagaa agttcaatga atataacact gatattttat
       61 atcgtagctt tgataatttc tttgcccatt acgacacagg tgtaaaacac aataatctat
      121 ccttaggctt gaatacaaaa ttaagtgaga atttacgtgg tggcttattc tttgaataca
      181 gtaataaaaa tcgtaatagc gtacaaattg gtgcaagagc taaatatgaa atggataatc
      241 accaactttc tggcttctta cgctatcgtg gcgtaaaaca taaagatatg ctagcacgta
      301 ataacagtgt tgatggctac ctaaattatg cttatcgtat tcaattagat gataaattaa
      361 gcattagccc atcagttggt gcttacgttt cacgttcttc tcgctcatta atagatgaag
      421 atcttgcgat taatagccgc acggtctatg caagtgatgt aggattgaat atccattata
      481 agctaaatga tattgatgct tatattcgtc caagtatagg ctttgtcaat ggtgatataa
      541 ctttatctca atctaatgat atgacaaaca catacaaaat aaaggataaa agtaacgtgt
      601 attctgtcac gacagggttg aaaaaacgct ttgcaaatgg tgtggcatta ggggctgatt
      661 tcaaattaca tcgttatggt tctcaaacta ctgaaagtaa tttcggtcta aatgtaagtt
      721 ataactggta ataccgtaaa ctgattacga tttaaaagtt agactagccc aagactgagt
      781 tctatattcc atagagctca gtcttttaat ttttctttct cgataagaat attttatatt
      841 tcaaccttaa tcgagaatgt aattagtcgt gaaaatctaa gtagtgattg agttttttta
      901 ttcaatcact actttagcaa tataatctaa atgacgatat ttttgggcat aatcaatccc
      961 ataacccacc acaaattcat cggggatctc aaatcccacc cattttacgg gcacatcaac
     1021 ttcgcggcgg caaggtttat ctaataaagt acaaatagca agtgaatttg gctcacgtaa
     1081 cttgagaatc tcccctacct tgcttaaggt gaagccagta tcaataatat cttctacaat
     1141 caatacatct ttaccttgaa tttcgccatc taaatctttt agaattttga catcacggct
     1201 ggattccgtg ctgctgccat agcttgatgc ggttagaaaa tccacttcta caggtaactc
     1261 tagctttctt actaaatctg ccataaacat aaacgagcct cgcaataaac caaccactac
     1321 aaggttttgg cactgttttt ggtgatagtg ttgattgatt tcttttgcta attcattgat
     1381 tcggtttaat acttcttctt ttgaatgtag cgtttcgata tgatgttttt ccattgattt
     1441 ctccaaataa aattgattac aagcggccgt ttttactcgc ctgaaaccat cattttttct
     1501 aataagattg aacctgtttg gatatttgag cggtgttcaa tatcatcgcc taccgccact
     1561 aaatttttat acatatcttg cagttgccct gcaatggtaa tttccgctac agggtattga
     1621 atttcaccgt tttctaccca aaatcctgct gcacctcgag agtattcccc tgttacgcta
     1681 ttaatcgcag aacctagcat ttccgttact aataatcctg ttcccatttc cttaagtaac
     1741 gtatttaaac caccttgacg atttggttta actaaccagt tatgaatacc acctgcgtgt
     1801 cctgtacttt ttaaccccat tttacgccct gaatagctag tcattaaata cgtttgtagc
     1861 acgccatcag taataatttc acggttttgg gtaattacac cttcactatc aaacgcagaa
     1921 gaggctaatt gacgcaacaa atgcggacgc tctgaaatcg caaaccattc aggcagaatc
     1981 tgttcgccta atttatctaa taagaaactt gatttgcggt ataatgcacc gccactaata
     2041 gctccggcca aatgccccac taaaccggtt gccacatcgt tatagaaaat cacagacatt
     2101 tcgccggtct taattcgttg cggattcaat ctatctaccg ctttaattgc agcttgctcc
     2161 cctacccatt tcggtgcttg taatttatca aactcacgga aaatggtgta ttcataatca
     2221 cgctcaagct gatcttcata agctgaaatc acgctacaag agagtgaata tcggctcgac
     2281 aggtaactct gcaacattcc gtgcgtattg ccataaacac gcacgccact gtgagaattg
     2341 aaagttgccc cgtcactatt cacaattttt tcgtctgcat ttaaggcata atgctccgct
     2401 tcaatcgcca attcgactgc ttgatcaact gaaatatccg cttggtggta caattccaaa
     2461 tcttctgcct caaaggcaag caattcttta tcagcaagcc cggtacaagc atcttctgag
     2521 gtatattttg caatcgcaag agctgcttca accgtttttt gaatcgactc tggctgaaga
     2581 tcggaggtgg aagcattacc tttgcgtttg cctaaataaa ccgaaatacc gagagaacca
     2641 tcgttattga actcgatgtt ttcaacttgc tctaaacggc ttgaaaccga aagcccggca
     2701 actttagtca cgcctacttc cgcctctgcc ccagcctgtt ttgcaaaatt taaggcaaat
     2761 tcgaccgctt gtcgtagctc ctgttcttgt tgtaacaagg tttgtttatc tgtaattgac
     2821 attttgttcc attgattgat tgcattgatg aatatattct aactcaaatt tctgttagaa
     2881 tacggcattt tttagagttt atgtaatgaa aggataaaga atggctaaaa aacggagcaa
     2941 aaacgaaatt gactggacag atgaggaaga agaaatcatc tgggtcagca aaagtgagat
     3001 aaaacgagat tctgaacact taaaaaaaat tggggctgaa ttgatcgaat tgaccccaca
     3061 aaatttggaa aaaattccac tagacgatga tttaaaagag gcaattcgcc aagctcaagg
     3121 ctttaaaatg gaggctcgcc gccgtcaaat tcaatttatc ggcaaattat tacgcaaccg
     3181 tgaccaggag ccgattcaag aagccttaga taaagtgaaa aatcgccata atcagcaaca
     3241 agccctatta cataaattgg aattagtgcg taatcaactg attgcaatgg gcgatgcatc
     3301 attagataat ttattgacgg aatatcctca attagaccgc caacatttgc gtaatttaat
     3361 tcgtggggca attaaagagc gtgaagccaa taaaccggca aaaaattacc gtgaaattta
     3421 tcaatattta aaaactgaaa tcgtggagtg attattatgg agtacctatc aaccattctt
     3481 aaagctcata tcggcttagc ttatattagt ttaattttat tattaacccg tggattttta
     3541 tcgtcaaaga tggtggattg gcgacaatat aaaattttgc gcattgcccc acacgcagtt
     3601 gataccttct tacttatcac cggtattgct gctgtcgcta ttttcttagc ttatgatttt
     3661 ttcaccttag cacaattcag ttggttgcta ccaaagttac tcttcttagt actttatatt
     3721 gtatttgcga caaaagcgtt caaaaaagga caaccgtttt cgctcaaatt ttatctgtta
     3781 gccgtagtct cattcttatt aatgatgcta actgccactt ttcactaaat aagggaaact
     3841 atgatcgggc cttttgtgaa tgccggtgca attattttag ggggcgtgct gggtgcttgt
     3901 ttagggagtc acctgcctga acgtattcgc actacgttgc cgctggtatt cggcttatgc
     3961 tgtttcggct taggtatgat gctgactgcc tcagtaaaat atatgtctgc ggttgcctta
     4021 gcattgattt taggcacgat catcggtgaa ctgatttatt tagaaaacag aatcggtaaa
     4081 gttgccggtt tagctcgtgg tttaattgac cgcctattcc caccggtgca tagtctttcc
     4141 caagaagagt ttttagagaa atttattgct ctgcttgtac tgttttgtgt gagcggtacc
     4201 ggcatttttg gtgcaataaa ggaaggaatg acaggcgatc caagtattct ttacattaaa
     4261 tcgattctag atttcttcac cgcaatgatt ttcgctgctt cgttaggcta tgccattgcg
     4321 gcgattgcag tgccgttgat tattgtgcaa gggattttaa ttctactggc aaccgtgatt
     4381 atgcctttaa ccactgccaa tatgatggca gatttctccg caaccggcgg tttactgcta
     4441 tttgcaaccg gctttcgcat ttgtggaatt aaaaactttc cggtcgcaaa tatgctacca
     4501 gcactactcc ttgcgatgcc gatgtcttat ttctgggaat ggttggtaca ttaatgatga
     4561 aaaaacgtat tattgtcggc attagtgggg caagtggttt tcaatatggc tataaagtgc
     4621 ttgaactgct gaaaccgttt tcagaaattg aaacccacct tgtaatcagc aaaggagctg
     4681 aactcactcg tactctcgaa acggattata cccgagaagc tcttcatgat ttagctgatc
     4741 aaatacattc gctaaacaat gtcggagcaa gcattgccag tggttcattt aaaaccgaag
     4801 gtatggtcat cgccccgtgt tctatgcgaa cccttgccgc tattgccaac ggtttgagcg
     4861 ataatttgct gacccgtgcg gcagatgtgg tgttgaaaga acggcgtaaa ttggtattaa
     4921 tggtgagaga agctccgctc aaccttgctc atattgacaa tatgcgaaaa gtcacagaaa
     4981 tgggcggcat tattttccca cccattccgg cgttttacca aaagccaacc agccttgacg
     5041 agatggtcac ccacagcgta agccatgccc tttccctgtt ggatattgac attccaaata
     5101 ccccacattg gggagaataa ttcggcttat cttttgcttt ttgaaatgct agaatacctg
     5161 ataaaaacta tcaggtattt ttatgcacaa tccaatcccg acccatattt tagatttcat
     5221 tcaaactaac cacgttgtca atattgcagc tcataccgaa caggattttt gggcagcaaa
     5281 ttgcttttat gcctttgacc aagaaaatgt tcgcttgatt atcttaaccg ccaagaaaac
     5341 cagacacgct ggcttgatgc ttgaaaaccc acatattgtc ggcacaattt gtgggcaaat
     5401 tgagaagatc aacgaaattg aaggtgtcca attctccgct accgccgaat gtttagaaga
     5461 taaacaagcc gaaaaagccg ctttgcaaat ttattaccaa aaacacccgc ttgcacggct
     5521 taagcctagc gatgtttggg tgttatcatt caataccatc aagcacaccg gtaataaact
     5581 tatgtttgcg aaaaagacga tttgggagag aaatataatt tgaagctcaa ataatgcctt
     5641 tagccttatc ccgtttgatt tggcttggtg ttatcccaaa agttcgctta aatgccgttg
     5701 aaaaattctc cgaattggca tatccggcaa attcagctgc ttgtgtaata ctctgccctt
     5761 gtaatagtaa tttataggct tgttctaatt tagaacgcct taaatacgca aaaatagagg
     5821 ttttgtggta atgctgaaat tcattttgta atgtggtcac attggtatgg aaatatattg
     5881 caatctgctt caaactccag ccgtcaaatt taccgctctc aagcaattct gttaactgtt
     5941 gcacccgatc tttttttaac cggggagcct gtgtcagctg agaaaaagca cttgctaata
     6001 aagctaatag attaccttct ttctcaagta acccaaatgg ttgcatttcc tgctctgaca
     6061 caatatcgtg aataagtttt aacatactct gagtcaaaat aatttggtgg gcttttaaat
     6121 gctgtttaaa gtgatgatag cttgccaaat ttaactggct ttctattagc catttagggt
     6181 agagaaagat aacaagctct ttttgaagtt gccctttcct aaaaatttta cgccccattt
     6241 cagctctatt tagcggtaaa aatgcggctt gaggttttaa acttgcatct aattcaaata
     6301 cttccgaatt aaaatcaatt tccgatcgac cactcaacaa tataaccaat cttagtccgg
     6361 cttcaaattc cgcaggttct tgctctacgg tttcagtaac tgaaatctct gtatatttca
     6421 gcataagatc tgaacgtagt cggtataaat gtgaaaaacc ttttatttgg ttagcttcat
     6481 caatcaagat tgttttcatc attaaaaact ttttttcgca tagtcaaaat tttattttac
     6541 aaaggttttt tgcataaaaa caagatatta ttatattcaa taatcattct tatttaagga
     6601 taaactaatg aaaataaaaa aatattcact ttctctaatc actttagcga ttgtagctcc
     6661 tcaagtatta gcagaaacaa cctctcaagc agaactaaat gctattgagg tcaaagagaa
     6721 attggcagct accaccggct atattcctgt ttatacgact gtaggaacga aaacattaac
     6781 ctctttggct cgtacacctt ttagtatcaa tgttgtctct gatgatttaa tgcatgacca
     6841 agctgttcgt tctgttaccg attcagtggc ttatacctcc ggtatgatgg gtggctatcg
     6901 tggtaacaat tcgcttatcg aaatctccat tcgaggcatt ggcaataaaa gtgatggcag
     6961 tacaattccg acctatttaa acggttctcg ctaccaaact gcatttgaaa tcgatccgtt
     7021 cttcttagaa agtatcaatg tgattaaagg tccaaactcc attttatacg ggcaagctaa
     7081 tcccggtggc gtaatggata ttatcaccaa aaaagccggc agtaacccac atcgccattt
     7141 gcaatttgtg gtgggaaacc atcaacgata ccaaatcggg ctggatattg aagaaaatct
     7201 ctccaatacc ttatccgctc gtttaatcgg tcaattagaa cgaacaaact ggaataccta
     7261 atttgtaaaa gaaaaaggcg gtgcttttgc tccaagcatt ttatggaaac cgactacaaa
     7321 tacagaactt aatgtttacg cttactatgc aaaaaaaccg aaagccggtg atcgtaactt
     7381 tttaccgaaa gaaggaacga ttaatagcgt aaacgggaag gaactaccct atgatatgtt
     7441 cctcagcgat ctgaactatc acggtttaaa agccgaacaa atgcaagtag gttacagttt
     7501 ctcacataaa tttacgccaa acctaacgtt ccgccaaaat gcaagttacc ataatggcga
     7561 agagaatttc aaaaatctag tttattgggg cgatgtcggt tcggttttag aacgtagagc
     7621 tcgccattgg gatgtcaaaa cccaagaaat caacttagat aaccaattag aatgggtatt
     7681 tagcacagca aatataaatc ataccttgtt agccggtatt gattataaac gagtgcgtaa
     7741 agatcttgat aactatatgg ggattgcccc tgattttgat tggcagaacc ctgtttatgg
     7801 cgtgaccgtt actgagccta gcttattttc aagtgaagtg aagcatttaa aacaacttgg
     7861 ggtttatcta caagatcaaa tagaaatcgg taattttgac ttcctgttag gcggtcgtta
     7921 cgatcgagca aaaaacagca accaagatcg tttgaacagt aaaacagaga ataaccaaga
     7981 aggaaaattt acttggcgta caggcgtagt ttacaacttt gaaaacggta tcgctccgta
     8041 tatcagctac agcacttctt ttgtgccatc ggctgaaaaa gatgctcaag gaaatttctt
     8101 aaaaccaaca actgctgggc aatgggaagt gggaatgaaa taccaaccta cccaagacac
     8161 cttactgacc ttagcaggat ttaaaattac acaaaaagat ttagccaatt atcaatggca
     8221 aacccgctct tatgagcaaa ttggtgaagt gcaaaccaaa ggaattgaag tgagtttaaa
     8281 tcagcaatta tccgataaat tttcaatagc ggcttcttat gcttacttaa aaaaagagat
     8341 tactgcagat aaagatggca cgacgattgg aaaaacgcag tggggagtgc ctcgccatca
     8401 agcatctctt tgggcaaaat ataaattctt tgataagctg accgccggtg taggtgtacg
     8461 ctatatggga acgacttttg gcgataacca aaatactttt accgtaccgg catacacact
     8521 ttacgatatg atgctagctt atgattttat gcctaactta aacttacagc tcaacgcaca
     8581 aaacctgacg aataaaaaat atgtcgcaag ctgtgccaat aatttttcct gtttctatgg
     8641 aaaagatcgc aatttaagtg caacgttaaa ctatcatttt taatctcaac agccctcaaa
     8701 tgagggctta aacttttgca aaaaatatga aaaaaacgac cgcttgtatt cttacttttt
     8761 tggtttcatc tgtgctttat gctaacaata taaccattga gcttaaacag aatgattttg
     8821 tgcaaggcaa attgattcag aaggctcaac agccactttc cttgtcgatt atttttcctg
     8881 accaaagctc tcgcctgctg gctcaaaatg tctttggtga acaagatttt atgtttaaat
     8941 cagaactaat cggcacagct actttttcta ttctagcgaa tggtgcaacc gtttcagacc
     9001 aagattttac cttaacgatt gagcggcata ttccaatctc ggcacaaatt gctccaccta
     9061 aagtaattga aaatacacag cttgaagaac tcagccaaaa aattgcaaaa aatccagaaa
     9121 aacagaccgc tttaattaac gatttttggg ataaagcaaa acaagccggc acaccattga
     9181 ttgaaccatt ggacgaacag caaagccgtg taactttttt atggcgtgga gcaacgaaaa
     9241 atgcccgtat ttggggcggt gtgagtactg aacacgattt tatgcaacgc tttggtgaaa
     9301 cggatatatg gtataaaagt tatatagtgc ccaatgacac tttagtggaa tacaaattag
     9361 ctccagatgt gccgacattg cccgttgatg agaataccca acgcagagcg ttactggcta
     9421 cggctcaagc cgatccactc aataaaacag catacttcga gaaaatcgga caaaatattc
     9481 ataataccga taaattcaac tacgcttcgc tacttaaatt gccaaacgca cctactcaat
     9541 cttttttgac tgaagctcca aatattgcaa aaggtaaact gcagcagttg atttttgaga
     9601 gtgcaacact cggcaataaa cacagattat tcgtctatct gcctgacggt tttagtgcag
     9661 aaaaaaacta tgcggttctc tatttatttg atggtgttga atataccgaa cgagtgccaa
     9721 ctaaaaccat tttagataat atgatcgctc agaaagtgat tctgcctact gtagcggtgt
     9781 ttatcgaaaa tccatcgagt gaatcaagac gtgtcgagct gcctgccaat cccatattta
     9841 cgcaagtatt ggcaaaagaa cttgtacctt ttgttgaaaa acagctcaat ataaaaacaa
     9901 aggagcgaat tattggcggc tctagctatg gcgggctatc ctctgcttac accgtactca
     9961 actatcctaa tgtatttagt aaagcattga ttctatccgg ttcattttgg tggcaaccca
    10021 aaggcacacc tagtgaacaa agccactata ttgctcaaca atttatccaa aaagaaaaat
    10081 taccactctg ttttttcatc agtgcaggtt tttatgaaag cgggaaatcg gctatttgta
    10141 agcggtcgaa ttattttgca tagaattaca ctcaattttg catagataaa aattaaaaac
    10201 tatgcaaaat aattgtagaa gatcaaacct aatctgacag tcccccgttt taaattaccg
    10261 tgtctgtcag attaatttga gcttaaattc ttttccaccc
//
LOCUS       DANLZQ010000092         9912 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.092, whole genome shotgun sequence.
ACCESSION   DANLZQ010000092 DANLZQ010000000
VERSION     DANLZQ010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9912)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9912)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9912
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.092"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            241..921
                     /locus_tag="PXE50_002028"
     CDS             241..921
                     /locus_tag="PXE50_002028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00153 family protein"
                     /protein_id="HDL5622901.1"
                     /translation="MALNNILGLFAQSPLKPLQKHSNKVTECSELLESFFEATFEHDW
                     EKAAEVRGKIVDLERRADALKREIRLKLPRGLFMPVERGDLLELVTQLDKLANYSRDI
                     SGRIIGRKLIIPTEMQPLFKKFLSRSIDASRQVRKVLDEMDQLLETGFRGRELDFVNK
                     MILELDQIEDDTDQYQITLRHTLLELEKNLNPIDVMFLYKCIERISVLADQAQRIGSR
                     IELMLAKS"
     gene            933..2201
                     /locus_tag="PXE50_002029"
     CDS             933..2201
                     /locus_tag="PXE50_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HDL5622902.1"
                     /translation="MELLNQYGSILVIITAIVGFMMAFGIGANDVSNAMGTSVGSGTI
                     TIKQAILIAMVFEFAGAYLAGGEVADTIKSGIIDPAQFANSPDILVLGMMASLCAAGM
                     WLIIATKMGWPVSATHTIIGAVIGFALITIGSDAIQWDALGGIVGSWFVTPILAGIVA
                     YSIFINSQKLIFNRSNPFKQAKKYGPMYMGITIFILVIVTVSKGLKHVGLHLDTAETL
                     GISFALALLAFIIGYFYFRSKSFAMKARAEEKGFAGVEKIFSILMLITACAMAFAHGS
                     NDVANAIGPLAAVESIVRSGGMIEGKTTLAPWILPLGALGMMIGLAIMGKNVMATVGT
                     GITDLTPSRGFAAQFACAVTVVIASGTGLPISTTQTLVGAVLGVGFARGIAALNLGVI
                     RNIVISWVITLPVGAVLSIIIYYILSAIFY"
     gene            2256..2867
                     /locus_tag="PXE50_002030"
     CDS             2256..2867
                     /locus_tag="PXE50_002030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HDL5622903.1"
                     /translation="MKKLSSALLSCFLLGLSSPALTADTYITENLSTFMRKGAGDQFR
                     ISGAIQAGEKVTVLDRKERYSLIRDSRNREGWVLNSDLSDTASPKELIPQLKQQVQDL
                     TNRLSKIDTEWQQRTAEMQRRTQDSVQKSSDLVEENAQLKRELEILKNKNRDLETMHD
                     SEKREIVIQWFIYGGAVLGAGLLLGLLVPFLIPRRRRNNSGWA"
     gene            complement(2921..4219)
                     /gene="aroA"
                     /locus_tag="PXE50_002031"
     CDS             complement(2921..4219)
                     /gene="aroA"
                     /locus_tag="PXE50_002031"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HDL5622904.1"
                     /translation="MEKLTLTPISRVEGEINLPGSKSLSNRALLLAALATGTTQVTNL
                     LDSDDIRHMLNALKALGVKYELSDDKTVCVVEGIGGAFKVQNGLSLFLGNAGTAMRPL
                     AAALCLKGEEKSQIILTGEPRMKERPIKHLVDALRQVGAEVQYLENEGYPPLAISNSG
                     LQGGKVQIDGSISSQFLTALLMSAPLAEGDMEIEIIGDLVSKPYIDITLSMMNDFGIT
                     VENRDYKTFLVKGKQGYVAPQGNYLVEGDASSASYFLASGAIKGKVKVTGIGKKSIQG
                     DRLFADVLEKMGAKITWGEDFIQAEQSPLKGVDMDMNHIPDAAMTIATTALFAEGETV
                     IRNIYNWRVKETDRLTAMATELRKVGAEVEEGEDFIRIQPLALENFQHAEIETYNDHR
                     MAMCFSLIALSNTEVTILDPNCTAKTFPTYFRELEKLSVR"
     gene            complement(4265..5359)
                     /locus_tag="PXE50_002032"
     CDS             complement(4265..5359)
                     /locus_tag="PXE50_002032"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HDL5622905.1"
                     /translation="MQFINIANEGVKSLSPYQAGKPIEELERELGIQNIIKLASNENP
                     FGFPESAKKAILNQLDDLTRYPDSNGFELKTTIAQKFGVQANQITLGNGSNDLLELFA
                     HTFAGEQDEIIYSQYAFIVYPLVTKAINAVAREILAKNWGHNLDAFLAAITEKTKLIF
                     IANPNNPTGNFLTQAEIEGFLAKVPANVIVVLDEAYTEFTAPQERVDSFGLLAKYPNL
                     IVSRSLSKAYGLAGLRIGYAVSNPEIADLLNRVRQPFNCNSLALASAIAVMNDDEFVK
                     KVAENNRLEMARYEAFCQANGLEYIPSKGNFITIDFKRPAAPIYEALLREGVIVRSIA
                     GYGMPNHLRISIGLPQENERFFTALLKVLA"
     gene            5631..6950
                     /locus_tag="PXE50_002033"
     CDS             5631..6950
                     /locus_tag="PXE50_002033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine permease"
                     /protein_id="HDL5622906.1"
                     /translation="MNHLLYSVEDKPPFGLSLLLASQHLLAALGGIIAVPLVLGNVLK
                     LSTADTIILVNAALLISGIVTIIQCRGIGPIGIRLPSVMGTSFTFVAAALAIGFSESG
                     IAGIMGASLVGSLVMIIGSFFMPYIRKLFPPVVTGTVIMMIGLSLIPVAVDWFAGGQR
                     TDPHYATPENLIMASFVLIIVVALVQWGKGIFSAAAIVIGMMIGYIVSLALGWVSFNG
                     VKEAQLFALPQPLHFGLEFPISGIIGMSIAYLVTIVESSGNFLALGNATKTEITGKHL
                     RGGVLCDGLGSAFAAIMSTTPFSSFSQNIGVISLTGVASRYVVAFTGALLVLAGLFPV
                     FGALIVSIPLPVLGGAGLMMFAMIIAAGIQMLDNIQRSKRNGLIIAISIGCGLAVTTR
                     PELLDKLPHFFKEVFGSGITVGSLLALILNLVLPEDKITKKENKSDE"
     gene            complement(7120..9063)
                     /gene="ftsH"
                     /locus_tag="PXE50_002034"
     CDS             complement(7120..9063)
                     /gene="ftsH"
                     /locus_tag="PXE50_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HDL5622907.1"
                     /translation="MVKNILLWVVIAIVMMTAYEGFNSNFSGSSNTVPYSTFLSDIKE
                     NRLKGVDFKQNDDTILVTKNDGATYQTVMPMYDEYLMADLAKTNAVITGQPAERRGLL
                     SQILISWFPMLLLIGFYVFYMRQMQGGGGRGAMGFGKNKAKMLTADEVKTRFSDVAGC
                     DEAKEEVGEVVEFLRDPTKFQKLGGRIPKGILMVGPPGTGKTLLAKAIAGEARVPFFT
                     MAGSDFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEIDAVGRKRGGAGFSGGHDERE
                     QTLNQMLVEMDGFEGSEGVIIIAATNRADVLDDALTRPGRFDRQVTVDLPNVKGREQI
                     LKVHLKKVPLAEGVDPMQIARGTPGYSGAQLANLVNEAALFAARKNKRVVMMEDFEEA
                     RDKINMGPERRSNTMTEKEIINTAYHEAGHVIVGYLMPEHDPLNKVTIVPRGQALGFA
                     QFLPEGDRVSETFTKLESQLSTLFAGRIAEGLIFGEDKITTGASSDIHRATQIARAMV
                     TQWGFSKELGPIFYQNEDGMGAIKGVSEESQKLIDVEMRKIIDRNYQRAKQTLEENMD
                     ILHAMKDALLKYETLDSKQIDDLMARRPVGEPSGWTDTPTKDDNATPPSGEQAADVSS
                     TLEDNPNKDNNIGDSLADTKAEH"
     gene            complement(9184..9810)
                     /gene="rlmE"
                     /locus_tag="PXE50_002035"
     CDS             complement(9184..9810)
                     /gene="rlmE"
                     /locus_tag="PXE50_002035"
                     /EC_number="2.1.1.166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011200140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uridine(2552)-2'-O)-methyltransferase
                     RlmE"
                     /protein_id="HDL5622908.1"
                     /translation="MGRKRSASSSRWLAEHFKDQFVQKAHKQKLRSRAYFKLDEIQQT
                     DRLFKPGMTVVDLGAAPGGWSQYVVTQIGSKGRVIACDILDMNPIVGVDFLQGDFREE
                     SVLNALLERVGEDKVNVVMSDMAPNFSGMPSVDIPRAMYLVELALDMCRQVLATKGSF
                     VVKVFQGEGFDEYLREIRSLFSVVKVRKPEASRDRSREVYIVATGYKG"
BASE COUNT         2801 a         2114 c         1909 g         3088 t
ORIGIN      
        1 ttgcataaaa tactcttttt aaaagcataa tactctttcg taacatcacc caaataagga
       61 ataagcgata taaaaaaaca agcataaatt tcttccattt tttgcaaaaa aattattaaa
      121 acaaaccgct tgtcttaaaa acataattta atttcgtgat ctttactaat acatcaagta
      181 aaatacgccg gactttacag taagaagtca ttgtcaatat tatcactatg gagatatttt
      241 atggcattga ataacatttt aggtttattc gcccagtccc cacttaaacc gttacaaaaa
      301 cactcaaata aagtgactga atgtagcgag ttattagaat ctttttttga agcgactttt
      361 gaacatgatt gggaaaaagc agctgaagtg cgcggtaaaa ttgttgattt agaacgccgc
      421 gcagatgccc ttaaacgtga aatccgctta aaactgcctc gtggtttatt tatgccagtt
      481 gaacgcggtg atttattaga actagtcaca caattagata agttagcaaa ctattcaaga
      541 gatatttccg gtcgcattat tggtcgtaaa ttaatcattc ctaccgaaat gcaaccactt
      601 ttcaaaaaat tcctttctcg tagtattgat gctagccgtc aggtacgcaa agttttggat
      661 gaaatggatc agttattaga aactggtttt agagggcgag agcttgattt cgtcaataaa
      721 atgattcttg aacttgacca aattgaagat gataccgacc aatatcaaat tacattacgt
      781 catacacttc ttgagttaga aaaaaacctg aaccctattg atgtgatgtt tttatacaaa
      841 tgtattgaaa gaatcagcgt tctagctgac caagcccagc gaattggttc tcgtattgaa
      901 cttatgctgg cgaagtcata ggagaaaatt aaatggaatt actcaatcaa tatggctcaa
      961 tactggtgat tattactgct attgtagggt ttatgatggc tttcggtatt ggtgctaatg
     1021 atgtttcaaa tgccatggga acatccgtcg gctctggaac aattacgatt aaacaagcta
     1081 ttttaattgc tatggtattt gaatttgctg gtgcttatct ggcaggcggt gaagtcgcag
     1141 atacaattaa aagtggcatt attgatccgg cacaattcgc caatagccct gatatcctgg
     1201 tacttggaat gatggcatct ctctgtgctg ccggaatgtg gctaattatt gcaactaaaa
     1261 tgggttggcc ggtttcagca actcacacaa tcattggtgc cgttattggt tttgcattaa
     1321 tcactattgg ttcagatgca attcaatggg atgcattagg tggaattgtt gggagttggt
     1381 ttgtgacccc tattcttgcg gggatcgtag catattcgat ctttattaac tcacaaaaac
     1441 tgatctttaa ccgctcaaac ccattcaaac aagcgaaaaa gtatggcccg atgtacatgg
     1501 gaattactat ttttatttta gttattgtaa ccgtgtcaaa aggcttaaag cacgtaggat
     1561 tacatctaga tacagctgaa acattgggaa tttcattcgc gcttgcctta cttgctttta
     1621 tcattggata tttttatttc cgcagtaaaa gctttgcaat gaaagctcgt gcagaagaga
     1681 aaggcttcgc tggcgttgag aaaattttta gtattttaat gcttattacg gcctgtgcta
     1741 tggcttttgc tcatggctct aatgatgttg ctaatgctat tgggcctcta gctgctgttg
     1801 aatctattgt aagaagtggt ggaatgattg aaggtaaaac gactttagcc ccttggattc
     1861 tcccactagg cgccttaggt atgatgattg gtttagctat tatgggcaag aatgtaatgg
     1921 ctacagtagg tactggtatt accgacctta ctccaagccg tggctttgct gctcaatttg
     1981 cctgcgccgt cacggttgtc attgcatcag gtactggttt accaatatca acaacccaaa
     2041 cgcttgtagg agcagtatta ggtgtgggat tcgcccgtgg tattgctgca cttaacttag
     2101 gcgttattcg taatattgtt atatcatggg taattacctt gcctgtaggt gctgtgcttt
     2161 caattattat ctattatatt ttaagcgcta ttttctatta atttttcaaa aagaatacag
     2221 gcaactgtat tcttcctagc tttagaggaa tatatatgaa gaaattatca tcagctcttc
     2281 tgtcttgttt tttactcggc ctatctagcc ctgctttaac ggcagacact tacattactg
     2341 aaaatctgag tacatttatg cgcaaaggtg ctggtgatca attccgcatt tcaggcgcta
     2401 ttcaagcagg tgaaaaagtc acagtattag atcgtaaaga gcgctacagt ctgattcgag
     2461 atagtcgtaa ccgtgaaggt tgggtactta attcagactt aagcgatact gctagtccaa
     2521 aagagctgat tcctcaatta aaacaacagg ttcaagattt aaccaatcgc ctgagcaaaa
     2581 tcgataccga atggcaacaa cgtaccgcag aaatgcaacg tagaacgcaa gattcagtgc
     2641 agaaaagcag tgatttggtt gaggaaaatg cacaactaaa acgtgaactg gaaatcctga
     2701 aaaacaaaaa tcgtgattta gaaacaatgc acgattccga gaaacgtgaa atcgtgattc
     2761 agtggttcat ctatggtggt gctgtgttag gcgcaggttt actacttggg ttactcgtgc
     2821 ctttcctgat ccctcgccgc agacgtaaca acagcggttg ggcttagtct gccacaataa
     2881 aacgtaaaaa ggattcagtt ttctgaatcc ttttttactt ttatctgacc gataattttt
     2941 ccaactccct aaagtaagtc gggaacgttt tagcggtaca atttggatct aagatcgtca
     3001 cttctgtatt cgataacgca attaatgaaa aacacattgc catacggtga tcgttatagg
     3061 tttcaatttc agcgtgctgg aagttttcta acgcaagcgg ttgaatccga ataaaatctt
     3121 ccccttcttc tacctctgcc ccgactttac gcaattcggt tgccattgct gtcaagcggt
     3181 cggtttcttt tacccgccag ttataaatat tgcggataac tgtttctcct tcggcaaata
     3241 aagcggttgt tgcaatcgtc attgccgcat caggaatatg attcatatcc atatctacgc
     3301 cttttagcgg ggattgctcg gcttgaataa aatcctctcc ccaagtgatt tttgccccca
     3361 ttttttccaa cacatcggca aacaagcggt cgccttggat cgatttttta ccaatgcccg
     3421 ttacttttac cttgccttta atcgcaccgg aggctaagaa ataagaggca gaagaggcat
     3481 ctccctccac caaataatta ccttgtggag caacatagcc ttgtttacct ttaactaaaa
     3541 aggttttgta atctcgattt tcaaccgtaa taccaaaatc gttcatcatc gaaagggtaa
     3601 tatcaatata aggttttgat accagatcac cgataatctc aatttccata tcgccttccg
     3661 ctaatggggc agacatcagc aatgcggtta gaaattggct ggaaatcgag ccgtcaattt
     3721 gcacttttcc gccctgcaaa ccgctattgc taattgccaa cggtggatag ccttcatttt
     3781 ctaaatactg tacctctgcc cctacttggc gtaaagcatc gactaagtgt ttaatcgggc
     3841 gttctttcat tcttggttca ccggtaagaa tgatttggga tttttcctca ccttttaaac
     3901 acaatgctgc tgcaagtggt cgcattgccg tgcctgcatt gccgagaaac agtgataagc
     3961 cgttttgaac cttaaaagct ccaccaatcc cttcaactac acagacggtt ttatcgtccg
     4021 atagctcata tttcacgcct aacgctttta aggcattgag catatgtcga atatcatcac
     4081 tatctaataa attggtcact tgagtcgtac cggtggctaa ggcggctaat aataaggctc
     4141 ggttagacag gcttttagaa ccaggtaaat tgatctcgcc ttctactcgg gaaatcgggg
     4201 ttaaagttag tttttccatt tttctcttta aatttgtaaa attttcataa aaggtaaccg
     4261 cttgttaagc taacactttc aataaggcag taaaaaatct ctcgttttct tgcggtaaac
     4321 cgatactaat gcgtaaatga ttcggcattc cataacctgc tatcgagcga acaatcacgc
     4381 cttcacgcag taatgcctca taaatcggag cggcaggacg tttgaaatca atagtaataa
     4441 aattgccctt agaagggata tattccaagc cgtttgcttg gcagaaagcc tcatagcgag
     4501 ccatttccaa gcggttattt tctgccactt ttttgacaaa ttcatcatca ttcattaccg
     4561 caatcgctga agctaaggca agactattgc agttaaacgg ctggcgaaca cgatttaata
     4621 aatccgcaat ttcagggttt gaaaccgcat aaccaatccg aagcccggct aagccgtaag
     4681 ccttagagag tgaacgtgac acaattaaat tcgggtattt tgccaataag ccaaacgaat
     4741 ccacccgttc ttgaggcgca gtaaactcgg tataagcttc gtccagcacc acgattacat
     4801 ttgccggcac tttagctaaa aagccctcaa tttccgcttg ggttaaaaaa ttaccggtcg
     4861 gattattcgg gttggcaata aaaattaatt tagttttttc ggtaattgca gccaaaaagg
     4921 catctaaatt gtgtccccaa tttttagcca gaatttcacg ggcaacggca ttaatcgctt
     4981 tcgtcaccaa cggatacaca ataaacgcat actgagaata gataatttca tcttgctcac
     5041 cggcgaaggt gtgggcaaac agctctaata aatcgtttga gccattgcct aaggtgattt
     5101 gattggcttg tacgccaaat ttttgggcaa tagtggtttt taattcaaag ccgtttgaat
     5161 ccggatagcg ggttaaatcg tcaagctgat tcagaatcgc cttttttgca ctttcaggaa
     5221 aaccaaatgg gttttcgttc gaggctaatt taatgatatt ttgaatccct aattcacgct
     5281 ctagctcctc aatcggcttt cctgcttggt aaggcgaaag ggatttcacg ccctcatttg
     5341 cgatgttgat aaattgcata ataacctctg attattctta taaaatataa gttcggattg
     5401 tagtaaagaa tgattgcctt taccagtaaa ttttttgtta caactggaaa gaaattggta
     5461 caaacattcg gattagcttt gcaaaaagcg taaaaaatct taccgcttgt catttatcag
     5521 ttagggaaaa taaaaaatca ctctcttata taaaaacaat tacgcaaacg attgcttatt
     5581 aaaaaaactt cagtataatg ccgacatttt ttaactctcg aggaatcact atgaaccatt
     5641 tactttattc tgtcgaagac aaaccgcctt tcgggctgag cttattgctt gcctcacaac
     5701 atttattagc cgctttaggt ggcattatcg ctgtaccttt agtgctaggg aatgtactca
     5761 aactctctac tgcggatact ataatcttag ttaatgctgc acttttaatt tcaggcatcg
     5821 tcactattat tcaatgtcga ggtattggcc caatcgggat tagactaccg agtgtaatgg
     5881 gaactagctt tacgtttgtt gcagcagcat tagcgattgg tttcagtgaa agtggcattg
     5941 ccggcattat gggagcctct ttagttggct ctctagtgat gattatcggc agttttttta
     6001 tgccttatat ccgtaagctt tttccacccg tggtaacagg tactgtcata atgatgattg
     6061 gcctaagttt aattcctgtt gcagtagact ggtttgctgg tggtcagcgt actgatccac
     6121 actatgcaac cccagaaaat cttataatgg ctagttttgt attaattatt gtcgttgctt
     6181 tagtacaatg ggggaaaggt attttttcag ctgctgctat tgtgattggt atgatgatag
     6241 gttatatcgt ttcgctagct ctgggttggg taagttttaa tggcgtgaaa gaagcacaac
     6301 tttttgcgtt accacaacct ctacattttg gcttagaatt tccaatctcc ggtatcatcg
     6361 gaatgtcaat tgcttattta gttaccattg tagaatctag cggaaatttc ttagcactag
     6421 gcaatgcaac taaaactgaa attaccggaa aacacttacg tggaggtgta ttatgtgatg
     6481 gtttaggctc agcatttgcg gcaattatgt ccacaactcc cttttcttct ttctcacaaa
     6541 atattggggt catttcatta accggtgtag ccagtcgcta tgttgtagca tttacaggcg
     6601 cattacttgt actagccggt ttatttcctg tatttggagc attaatcgtg tctatcccgt
     6661 tacctgtgct tggcggtgca ggcttaatga tgtttgccat gattatcgca gccggtatcc
     6721 aaatgttaga taatattcaa cgtagcaaac gaaacggttt aattattgct atctctatcg
     6781 gttgtgggct ggccgtaaca actcgacctg agctattgga taagcttcca cacttcttta
     6841 aagaagtttt tggctcaggt attacggtcg gctccttatt agcacttatt ttgaatttag
     6901 ttttacctga agataaaata accaagaaag aaaataagag tgatgaataa atcaccctaa
     6961 aaaaacaagg acagctcaca atacaacttt gatgctgtcc tttattccca tagagagcat
     7021 atttaaattt aggttaataa aaaaatctgc actctatatt ggtgtttacc tttagagtac
     7081 agatttcttc ttattctaac tttctagcaa acaattagat taatgttccg ctttggtatc
     7141 ggctaacgaa tccccaatgt tattatcttt atttggatta tcctctaaag ttgaacttac
     7201 atccgctgcc tgttcaccac ttggtggagt ggcgttatcg tctttagttg gggtatctgt
     7261 ccaacctgat ggttcaccca ccggacggcg tgccattaaa tcatcaattt gcttgctgtc
     7321 taaggtttcg tatttcaata aggcatcttt cattgcgtgt aagatgtcca tattttcttc
     7381 caaagtttgc ttcgctcgtt gatagttgcg gtcaatgatc ttacgcattt ccacatcaat
     7441 caatttttgc gactcttccg atacgccctt aattgcaccc attccatctt cattttgata
     7501 gaaaatcggg cctaattctt ttgagaagcc ccattgagta accattgctc gtgcaatttg
     7561 ggttgctcga tgaatatcag aggaagcccc tgtggtaatt ttatcttcac caaaaatcaa
     7621 gccctcagca attcgccctg caaatagggt ggaaagttgg ctttccaatt tggtaaatgt
     7681 ttcgcttaca cggtcacctt ccggtaagaa ttgagcaaaa cctaacgcct gaccacgagg
     7741 cacaattgtc actttattca gcggatcgtg ttccggcatt aaatagccaa caataacgtg
     7801 tccagcttcg tggtaagcag tattgatgat ctctttttcc gtcattgtat ttgaacggcg
     7861 ttccggcccc atattgattt tgtcacgggc ttcttcgaaa tcttccatca ttaccacacg
     7921 tttattctta cgggcagcaa ataaggcagc ttcgttcacc aagtttgcta attgagcacc
     7981 agagtaaccc ggcgtaccac gagcaatttg catcgggtca actccctctg caagcggtac
     8041 ttttttcaag tgaactttca aaatttgctc acgccctttc acgttcggca aatcgaccgt
     8101 gacttggcgg tcgaaacgcc ccggacgagt taaggcatca tctaacacat cggcacggtt
     8161 ggttgcagcg atgataatca caccttcaga gccttcaaag ccgtccatct caactaacat
     8221 ttggttgagg gtttgttcac gctcatcgtg tccaccgctg aaacctgcac caccacgttt
     8281 acgccctacc gcatcaattt catcaataaa aataatacaa ggggcatttt tcttggcttg
     8341 gtcgaataaa tcacgcaccc gtgaagcacc cacacctaca aacatttcca cgaagtcgga
     8401 acctgccatt gtaaagaatg gcactcgtgc ttcacctgca atcgctttcg ccaataaggt
     8461 tttacccgta cccggagggc ctaccatcaa gatccctttt ggaatgcgcc cacctaattt
     8521 ttgaaattta gttgggtcac gcaaaaactc aacaacttcg cctacttctt ctttggcttc
     8581 atcacagccg gctacatcag aaaatctggt cttaacttcg tctgcggtca acattttggc
     8641 tttatttttc ccaaagccca ttgcaccacg tcctccgcca ccttgcattt gtcgcatata
     8701 aaacacatag aaaccgatta acagcaacat tgggaaccaa gaaatcaaaa tttgcgagag
     8761 caagccacga cgctcagcag gctgaccggt aatcactgca ttggtttttg ctaaatctgc
     8821 cattaagtac tcatcataca tcggcattac ggtttggtag gttgcaccat catttttcgt
     8881 caccaaaatg gtgtcatcat tctgtttgaa atcgacccct tttaaacgat tttctttaat
     8941 atcgcttaaa aaagtcgaat atggcactgt atttgagcta ccactgaaat tagaattaaa
     9001 accttcatag gctgtcatca tcacaatggc aatcaccacc caaagtaaaa tatttttaac
     9061 catatcgttc aaggttaatc ccctatctgc tgaataaaaa actgttcaag attactataa
     9121 aagcggtcga attttccaat ttttttgcaa aatgttaata aaaaatgacc gcttgcttgt
     9181 tttctagcct ttataacctg tcgctacaat ataaacttct cgagaccgat ctcgagacgc
     9241 ctccggtttt ctgactttta ccacactaaa gagcgagcgg atttctcgaa ggtattcatc
     9301 aaatccttcg ccttggaata ccttaaccac aaaactgcct ttggttgcta atacttggcg
     9361 acacatatcc aatgccaatt ccactaaata cattgcacga ggaatatcaa ccgacggcat
     9421 accgctgaaa ttgggagcca tatccgacat caccacattc actttgtctt cgcctactcg
     9481 ctcaagtaac gcattcagca ccgattcttc acggaagtcg ccttgtaaga aatccacgcc
     9541 tacaatcggg ttcatatcta aaatatcaca agcgattact ctgcccttac tgccgatttg
     9601 cgtcaccaca tattgcgacc aaccgcccgg tgcggcaccg agatccacca ccgtcattcc
     9661 cggtttgaat aaacggtcgg tttgttgaat ttcatctaac ttaaaatacg cccgtgaacg
     9721 caatttttgt ttatgtgctt tttgcacaaa ttgatcttta aaatgttctg caagccaacg
     9781 tgatgaactc gcacttcgtt ttctacccat ttgttcttct atcttaatta attcaacgat
     9841 ttataataag ggttaaatta gcaaattcaa gagatgttct aaaatttagc tcggcttatt
     9901 atgcttaatt aa
//
LOCUS       DANLZQ010000093         9898 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.093, whole genome shotgun sequence.
ACCESSION   DANLZQ010000093 DANLZQ010000000
VERSION     DANLZQ010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9898)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9898)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9898
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.093"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            204..1910
                     /locus_tag="PXE50_002036"
     CDS             204..1910
                     /locus_tag="PXE50_002036"
                     /EC_number="2.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-5-enolpyruvyl-6-hydroxy-3-
                     cyclohexene-1-carboxylic-acid synthase"
                     /protein_id="HDL5622909.1"
                     /translation="MNTSSFNRTWAKVILSALMRYGVKHFCIAPGSRSTPLTLAAVQL
                     QQTQYAECHTHFDERGLGFYALGIAKATDSPVAIIVTSGTAVANLYPAVIEASLSHQK
                     LIILSADRPTELIGCGVNQAIHQQGIFANYPVASVNLPKANEAYHASWLVSTIEQACT
                     TQAQQGGVLHINVPFEEPLYEADINEILNTPWLRPIQGWLNNAQTKWIDQQAIQSEVS
                     MHENWDYWRTKRGVIVVGKLPPEQGTGLKTWAETMGWCLLSDVQSCIEASLPYADIWL
                     SNETVKQRLLQADIVIQFGTQIVSKRVNEFLKAFQGEYWVVEQSHDYHNPNAHHQTRF
                     IAKAHHFLRVHPPLRQKPWLLEPLALSQFCSTFIEQQVGGSLSEASLAHNIQDVLAIN
                     GNLFIGNSLFVRLVDALCKLPEGYPVYTNRGASGIDGLIATMAGIAKGSDRPTVGVVG
                     DISALHDLNSIALLTKINQPTILFVVNNSGGALFDMLPVDSKAKDQYYRLAHNFEFAQ
                     VATMFGLEYIRPFTWADLKTKLKHAYARKGVTIVEIKVNEHDGSNMYKSLLKQISQAE
                     IA"
     gene            1959..2798
                     /gene="menH"
                     /locus_tag="PXE50_002037"
     CDS             1959..2798
                     /gene="menH"
                     /locus_tag="PXE50_002037"
                     /EC_number="4.2.99.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase"
                     /protein_id="HDL5622910.1"
                     /translation="MLSYQWHAQQGTPVVFLHGLLGSQQDWQAVLQHLQNFPQIRPLT
                     IDLPFHGNSKHITCADFANLRQQLHATLESLIGSRPFYLVGYSLGGRAALDYVLNMEN
                     PNLQGVVLEGANIGLSTENDRQIRRQNDRHWANRFRQEPIEQVLEDWYKQPVFADLSD
                     TERECYIDSRKHNQGEQIAQMLEATSLAKQPDYTEKLKQTDKNIVFFIGEKDQKFRKM
                     ASSHQLPTQLIANAGHNAHRANAKNFVEKLGLLILHSDSDLRSQSVKHNGAALLHKSP
                     SGA"
     gene            complement(2847..3524)
                     /locus_tag="PXE50_002038"
                     /pseudo
     CDS             complement(2847..3524)
                     /locus_tag="PXE50_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251475.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
     gene            3610..4272
                     /locus_tag="PXE50_002039"
     CDS             3610..4272
                     /locus_tag="PXE50_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heteromeric transposase endonuclease subunit
                     TnsA"
                     /protein_id="HDL5622911.1"
                     /translation="MRKTHSFQQVRKIKPTWMSVSGHIPFRNGVSIPYESTLERDFLM
                     YFTYLPSVDEVVSQPTTLPFVKNGITYTYTPDFFLSFTDGRKPMLIEVKPKAKWQKHW
                     KEWKEKWKAAIRFCQENGYVFHVYDEDRIRHLALFNLNYVQRYKRIQHEQEDIDAILA
                     QVKLMGNTTIDYLLSRFFAGSLYRMKGLQIIYHLLATKQLHCNWFLPLNEFTEVWGNN
                     DE"
     gene            4262..6190
                     /locus_tag="PXE50_002040"
     CDS             4262..6190
                     /locus_tag="PXE50_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015586984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HDL5622912.1"
                     /translation="MMSNSGFTEKRYHHRLDRGRIILQKGNIYLNREDGEQYELVDYM
                     DEPSQLLVRNLNTRTTKVVSIHQLENFKMNERTDLSVDVTAISNEYWEKAQQKYEAIK
                     PLLGMDQHRPYAVKARAEDVGVNPRTLYRWLQAYNSIGSIAGLVDQKRGWQQGNSRLT
                     PEQDKLIVQVINEFYLHKQRPTTEQTIREIRRRCKIEKVESPSKETIRMRILHISEEE
                     RLRKRGQREKARNKFKPKPNSFPDADYPLSVVQIDHTPVDLIIVDSKYRKPIGRPFLT
                     VAIDIYSRMIVGYYLSLDAPSVTSVAMCIARGILPKERLLLDLGLQGSEWNAFGYPVK
                     VHVDNGPDFQALDLSKSCSAHGIHLEFRPMGRPEYGGHIERVIGTFMKEVHSLAGTTF
                     SNIKERDSYDSEKEAIMTLDEFEKWLVHYIVNVYHKRVHSALGISPEQKWKIGIFGDE
                     NEVGCGYPQLPVDEQTLLLDFLPSITRTIQHNGVTIDGLRYYDVALNMYISDSDESGK
                     SKEFLFRRDPRNISKIWFYDPKLKRYFPIPFANQAMPEMSIWEYREVRSRIANKGDKY
                     INEQQVLDGLTEMREMVAESAQRTKKARRQAERQKMHKASKPIIETKVETKAVVPVVV
                     TSNLLALDDESLSFGEVD"
     gene            6190..7077
                     /locus_tag="PXE50_002041"
     CDS             6190..7077
                     /locus_tag="PXE50_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TniB family NTP-binding protein"
                     /protein_id="HDL5622913.1"
                     /translation="MQYEHVHEKFRHLVTADNQERIAFLDEPRWLGYGVAKDIMDNLV
                     SLMNKPKRPRMLNLLIVGDSNNGKTTLIRRFFDLYGQAYIDSDSNAIYPILLAEAPPS
                     ANEKELYISLLERFYVPYKPTDTIAKLRYQTIHLFREFRVKMLVIDEFHSLLVGTPRL
                     QRQVMNAIKMLCNELQIPIVGVGTRDAIRVLHTDRQHASRFDVAELPIWKLDKEFQKL
                     LFQFQGILPLRESSNLQSPELATKIHTISGGNLGNVHRLLTACAVQAITSGTEKITLD
                     IIEKNSWVQPTNGYRKIIG"
     gene            7035..8141
                     /locus_tag="PXE50_002042"
     CDS             7035..8141
                     /locus_tag="PXE50_002042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TniQ family protein"
                     /protein_id="HDL5622914.1"
                     /translation="MGTTNKRLSQNNRIKKGVIHTPIYSNESISSWLIRASFDCGTDP
                     LTFTGFYWEKHRLWTLDLDRGLENIEPTIYDDVQALSGKIQLSEYSLFRRLYPINADE
                     TLAKGQVRWVIPRSARNRTHHIGQQYCPLCLDESPHLRNDWRLAWNFGCLKHNMMLAN
                     RCFCCGTLYQPHLLSAEKRHLNHCHQCGGKLEQGTMEMSLAEKLTLQGINQVLEKDSG
                     ICFGYKVSGKVWFDMLRYCINLLRRASDRPNHALAKFVVNLQIDVENICSPKTGLSFE
                     QLPLGERTNLLVNAYHILGMEADSIRSAIYLCGGTQKTFMFEKYPDFWQEFMALAPAG
                     PNRTRKRTKPQNESITAINRRWERLKRKLHLNNE"
     gene            8138..9562
                     /locus_tag="PXE50_002043"
     CDS             8138..9562
                     /locus_tag="PXE50_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622915.1"
                     /translation="MKINVIKPQEEPCSACGKISRIWRRYNGEGYCANCYAKWFPKKE
                     CSCCHQPKRIYLSSTVCWDCEKQTDCVRCGKAAGTFKIGKITRYGAVCNVCSRYFREE
                     RECFECGQLSRTMLRASESGHSELLCLKCFQKYRFATCKNCRRYRKVHDRDNQLCRKC
                     SEQRTSQCPKCKQDMPAGYGNICADCSRRTLLFNLIRMNVHLFRHKKVKRAYKKFIFW
                     YLAKCGVSVVLKKSDDHVLFFMRCDENWGNIPDYRELVTFFKPNGLRTHLTVLRWLLD
                     TNQVKVDESLKEEMAGLERIQSLFNKLSNSVPCIANYYTQLQHKYEAGKTSLKSVRLA
                     LQPAIDFISSESVSLLPTQVQLNSYLVAKTGQIAAITGFINHLNREYHCELEIDRSLI
                     QKMKEKQLKQQAKQRLAILYKQEKLSIKEQNELLSVVLLNLHNIWIKSPKKLSISEID
                     GIAYYVDNEKKYFIPKDIHIRLME"
     gene            9677..9883
                     /locus_tag="PXE50_002044"
     CDS             9677..9883
                     /locus_tag="PXE50_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA delta(2)-isopentenylpyrophosphate
                     transferase"
                     /protein_id="HDL5622916.1"
                     /translation="MTLKAQFREWLKKEQEHDEMIGFAHIPCILSKVDSKLAIVSGNA
                     YEKKYLRYWIKCFRFDRNISKYIK"
BASE COUNT         3065 a         1995 c         2130 g         2708 t
ORIGIN      
        1 aaacacaaat tcgaaatacg tttcttcgta aatgctctta aaaaagagag agtttactaa
       61 gtaaagtgtt gctcaataga tagaaatttt cacgaagttt tacaaaaaca ttccaatttt
      121 ctcctaaaaa acttcccaca ataatttcac tttttgctac aatcctaacc atttatcgaa
      181 tttatcaatc agtagagaag aatatgaata ccagttcttt taatcgcact tgggcaaaag
      241 tgattttaag tgcattaatg cgttatggcg taaaacattt ttgtattgct ccgggttctc
      301 gctcaacacc gctcacatta gcggcagtgc aacttcaaca aacgcaatat gcagagtgcc
      361 acactcattt tgatgagcgt ggtttaggtt tttatgcgtt agggattgct aaagcaaccg
      421 acagcccggt tgctattatt gtcacttccg gcacagcagt agcgaacctt tatcctgcgg
      481 tgatagaggc aagcctgagc caccaaaaac tgattattct ttctgccgac cgcccaaccg
      541 aattaatcgg ctgtggggta aaccaagcca ttcatcagca aggtattttt gccaattacc
      601 cggttgccag tgtcaatcta ccgaaagcga acgaggctta ccacgcaagc tggctggttt
      661 cgaccattga gcaagcctgc actacccaag cacaacaagg cggtgtgttg catatcaatg
      721 tgccttttga agagccgctt tacgaagcag acattaatga aattctaaat acaccttggt
      781 tacgcccaat ccaaggctgg ttgaataacg ctcaaaccaa atggatagac caacaagcga
      841 ttcaaagcga agtctcaatg cacgaaaatt gggattactg gcgaactaaa cgaggggtga
      901 ttgtggtcgg caaactgccg ccggaacaag gcacaggttt aaaaacttgg gcggaaacca
      961 tgggttggtg cttgctaagt gatgtgcaat cttgcattga agccagcctg ccgtatgccg
     1021 atatttggct ctccaacgag actgtcaaac agcgtttatt gcaagcggat atcgtgattc
     1081 aattcggcac gcaaattgtc agcaaacggg tgaatgaatt tttaaaagca ttccaagggg
     1141 aatattgggt ggtggaacaa tcgcacgatt accataatcc aaacgctcat catcaaaccc
     1201 gttttattgc caaagcacat cactttttgc gggtacaccc accacttcgc caaaagccat
     1261 ggttgcttga gccattggca ttatcgcaat tctgctccac tttcatagag caacaagtgg
     1321 gtggcagctt aagtgaagcc tcacttgcac acaacattca agatgtttta gcaattaatg
     1381 gcaacttatt tatcggcaat agcttatttg ttcgattggt tgatgctctg tgcaaactgc
     1441 cggaaggcta ccctgtttac accaaccgtg gtgcaagcgg tattgatggc ttaatcgcaa
     1501 caatggcagg cattgcaaaa ggtagcgacc gcccgactgt cggtgtggta ggtgatattt
     1561 ccgcattaca cgatcttaac tcaattgcat tgctcaccaa aattaaccag ccgaccattt
     1621 tatttgtggt gaataacagc ggtggtgcgt tgtttgatat gttgcctgtt gatagcaaag
     1681 cgaaagatca atattaccgc cttgctcaca actttgaatt tgctcaagtc gccacaatgt
     1741 tcgggcttga atatatccgc ccgtttactt gggcagatct aaaaaccaaa ctcaaacacg
     1801 cctatgctcg taaaggtgtt accattgtgg aaatcaaagt aaatgaacac gacggcagca
     1861 atatgtataa atcattgcta aaacaaattt cacaggcgga aattgcctaa tcacaactgc
     1921 ccctcgccaa tcctgcgagg ggtaaaaatg tatcgactat gctttcctat caatggcacg
     1981 ctcaacaagg cacacccgtg gttttccttc acggcttgct cggctcacaa caagactggc
     2041 aagctgttct ccaacatttg caaaattttc cgcaaattcg accgcttacc attgaccttc
     2101 cttttcacgg aaatagtaag cacattacct gtgccgattt tgccaacctg cgacaacaac
     2161 tacacgccac ccttgaaagc ctaatcggct cacgaccttt ctatttagtc ggctactcac
     2221 tcggtggacg agcggcactc gattatgtgt taaatatgga gaatccgaat ctgcagggcg
     2281 tggtgttaga aggggcgaat atcggcttaa gcacagaaaa cgaccgccag attcgccggc
     2341 aaaatgaccg ccattgggca aaccgtttcc gtcaagaacc catcgaacaa gtgcttgaag
     2401 attggtacaa acagcctgtt tttgcggatt taagcgatac ggaaagagaa tgttatattg
     2461 atagcagaaa gcacaatcaa ggagagcaaa ttgctcaaat gctggaagcc accagcctcg
     2521 ccaaacagcc tgactacacc gaaaaactca agcagacgga taagaatatt gtctttttta
     2581 tcggtgaaaa ggatcagaaa tttcgcaaaa tggcatcaag ccaccaacta ccaacacaac
     2641 tgattgctaa tgcagggcat aacgctcatc gggctaatgc taaaaatttt gtggagaaat
     2701 tggggttatt gatactccac tccgacagcg acctacggtc gcaatcggtt aagcataacg
     2761 gtgcagctct gctgcacaaa agccccagtg gggcttaatc agccgtaggc taaatataac
     2821 ctagtacggc tcagccgtgc taggtgttag ggctccccct gcaaccgttg caataagcga
     2881 tccatcgccc gataaccaag tgcttccgct aaatgcagtt gttgaatatt cgcctcgccg
     2941 gctaaatcag caatagtccg agaaactttc aaaatacggt ggtaggctcg taccgataaa
     3001 ccgagctttg tcaatgcagt ttctaaaaat agggcatctt gtgccgataa ttggcaatct
     3061 cgctcaattt ctcgggtggt gagttgagaa ttgattttac ctgctcgctc aaattgcatt
     3121 tttctggcta aaaacactcg cttgcgaacc tgctcggtgg tctctcctcg attctccgtc
     3181 ccactttgca atgctccttg tggcaaaagt ggcacttcta tagagagatc gaaacggtct
     3241 aagaaaggtc cggaaaggcg gtttaaatac cgcattacct gttggggcga agtgcggtta
     3301 tgcgtgcctt gataatgccc tgtcgggctt gggttcatcg ctgcaattaa ttgaaagcgt
     3361 gccggaaatt gtactttagc gttggctcgg gaaatcacaa tttcgcctgc ctccaacggc
     3421 tgacgtaacg catcaagcac tttacgttca aattcaggca attcatctaa gaacagcaca
     3481 ccgttatggg caagtgaaat ttcccccggt ttggggatcg agccactgta aaaactagaa
     3541 ataaatgtca taaaaactag aaatagctgt cagattattt agaaaacaag aaataggtgt
     3601 caaattatta tgagaaaaac acatagtttt caacaggtta gaaaaattaa acccacttgg
     3661 atgagtgtat cggggcatat tccatttaga aacggagtca gtattcccta tgaatcgact
     3721 ttagagcgtg attttttgat gtatttcact tatctacctt cagtagatga agtcgtctct
     3781 caaccgacta ccctaccttt cgtcaagaat gggatcactt atacctatac accagatttc
     3841 ttcttgtcat ttacagacgg tcgaaagccg atgttaatcg aggtcaaacc gaaagcaaaa
     3901 tggcagaagc actggaaaga atggaaagaa aaatggaaag ctgcaatacg tttttgccaa
     3961 gaaaacggtt atgtattcca tgtgtatgat gaagatcgga ttcgacatct agcgcttttc
     4021 aatctcaact atgttcagcg ctataagcga atacaacatg aacaagaaga tatagatgct
     4081 attctagccc aagtaaagct gatgggaaat accactattg actatttact ctctcgattt
     4141 tttgcaggtt ctctatatcg catgaaaggc ctacaaatca tctatcactt actggcaacg
     4201 aaacaactac attgcaattg gtttctacca cttaatgaat ttaccgaggt atgggggaat
     4261 aatgatgagt aactctggat ttacagaaaa gcgctatcat caccgattag atcggggacg
     4321 tattattttg caaaaaggta atatttacct aaatagagaa gatggagaac agtatgaatt
     4381 ggttgattat atggatgaac cctcccaact gctcgtacga aatctcaaca ctcgtacaac
     4441 caaagtcgtc agtattcatc agcttgaaaa tttcaaaatg aacgagcgaa cggatctttc
     4501 tgtggatgta accgctatta gtaatgaata ttgggagaaa gcccaacaaa aatatgaggc
     4561 aattaaaccg ttattaggga tggatcaaca tcggccttac gcagttaagg ctcgtgcaga
     4621 agatgttggg gtgaaccctc gtacattata ccgttggtta caagcctata attccatagg
     4681 atctatcgca ggtttagtcg atcaaaaacg tggatggcaa caaggaaatt cccgtttaac
     4741 gccagagcaa gacaagctga tcgtgcaggt aatcaatgag ttttacctac ataaacaacg
     4801 cccaactact gagcaaacta ttagagaaat tcgccgccga tgcaaaattg aaaaagtgga
     4861 aagcccaagc aaagaaacca tccgtatgcg cattttgcat atttcagagg aagagcgatt
     4921 acggaaacgc gggcaacgag aaaaggcacg caacaaattt aagccgaagc caaatagctt
     4981 tcctgatgcg gattatccat tgagtgtggt acaaattgac catacaccag ttgacctaat
     5041 tattgtggat agtaagtatc gtaaaccgat tggccgaccg tttttgacgg ttgcgataga
     5101 tatatacagc agaatgattg ttggttatta cctttcactt gatgcgcctt ctgtaacttc
     5161 ggtggcgatg tgtattgcac gtggtatttt gccgaaagaa cgcctactgc ttgatttagg
     5221 tttgcaaggc tcagaatgga atgcttttgg ctacccagtg aaagtgcatg tggataatgg
     5281 cccagatttt caggctttgg atttatctaa atcttgttct gcacacggaa tccatcttga
     5341 atttagaccg atggggcgac ctgaatatgg cggacatatt gagcgtgtta tcggtacatt
     5401 tatgaaagaa gttcacagtt tagcaggaac aacattctcc aacatcaaag agcgtgactc
     5461 ttacgattcg gaaaaagagg ccattatgac tctcgatgag tttgaaaaat ggttggtaca
     5521 ttacattgtg aatgtttacc acaaacgtgt gcattctgct ttaggcattt ctcctgaaca
     5581 aaaatggaag attggtattt ttggagatga aaatgaagtg ggatgtggtt atccgcaact
     5641 tcctgttgat gaacaaacac tactacttga tttcttgcca agtatcactc gtaccattca
     5701 gcataatggt gtaacaattg acggacttcg ttattacgat gttgcgctaa atatgtatat
     5761 cagtgattca gatgaaagcg gtaaatctaa ggaatttctg tttcgccgag acccgcgaaa
     5821 tatcagcaaa atttggtttt atgatccgaa attaaaacgt tacttcccaa ttccatttgc
     5881 aaatcaggca atgcccgaaa tgagcatttg ggaatataga gaggttcgta gccgaattgc
     5941 gaataaaggt gataaatata tcaacgagca acaagtttta gacggtttaa ccgagatgcg
     6001 tgaaatggtt gctgaatcgg ctcaacggac gaaaaaagca cgccgtcagg ctgaacgaca
     6061 aaaaatgcac aaagcaagta agccaattat tgaaacaaaa gtggaaacta aggctgttgt
     6121 accagtcgta gtaacatcga atttgcttgc tttagatgat gagagcttat cttttggtga
     6181 ggtggactaa tgcaatacga acatgttcat gaaaaattcc gccatcttgt gacagcggac
     6241 aatcaggaga ggattgcgtt cttggacgag ccaagatggt taggttatgg tgtcgccaaa
     6301 gacattatgg ataatttggt ttctttaatg aataaaccaa aacgcccacg aatgttgaat
     6361 ttgttgattg tcggcgattc caataatgga aaaaccacac tgatccgccg cttcttcgac
     6421 ttgtacggtc aggcgtatat cgacagtgat tctaatgcga tttaccctat tcttcttgcc
     6481 gaagccccac caagtgcgaa tgaaaaagaa ttgtacatct cattattaga gcggttctac
     6541 gtaccatata agccgacaga tacgatagcc aaacttcgtt atcagactat ccatttgttc
     6601 cgagaatttc gtgtcaaaat gttggttatt gacgagtttc attctctgtt ggttggtaca
     6661 ccacgcttac aacgacaggt gatgaacgca attaagatgc tttgtaacga gctacaaatt
     6721 ccaattgtcg gtgttggtac tcgtgatgca attcgggtat tacatacgga tcgacaacat
     6781 gccagtcgtt ttgatgttgc ggaattgcca atatggaaac tagataagga atttcaaaaa
     6841 ctcctatttc aattccaagg gattttacct ttgagggaga gttcaaatct gcaatctcca
     6901 gaacttgcta cgaagatcca caccatttca ggtgggaact tagggaacgt gcatcgctta
     6961 ctaacagctt gtgcagttca agccattaca agtggcacgg aaaaaatcac cttagacatc
     7021 attgagaaaa attcatgggt acaaccaaca aacggctatc gcaaaataat cggataaaaa
     7081 aaggtgttat tcatacccct atttattcaa atgaaagtat tagctcgtgg ttaattcgtg
     7141 catcctttga ttgtggtaca gatccactga cttttacagg gttttattgg gaaaaacatc
     7201 ggttgtggac attagattta gatcgtggct tggaaaatat tgagccaact atctatgatg
     7261 atgtacaggc attatcgggt aaaatccaac tttcagaata ttccttgttt cgcaggcttt
     7321 accctataaa tgcagatgaa accttagcta aaggtcaagt aagatgggtg attccacgtt
     7381 cggcaaggaa tagaacccat cacattggtc aacaatattg tcctttgtgc ttggatgagt
     7441 cgccacattt acgcaatgat tggcggttag cgtggaattt tggttgtctc aagcataata
     7501 tgatgttggc gaacagatgt ttttgttgtg gtacattgta tcaaccccat ttactatcag
     7561 cggaaaagag gcatttgaat cattgtcatc aatgtggtgg gaaactggaa caaggcacaa
     7621 tggaaatgag tctagctgaa aagctgacat tgcaaggtat taatcaggta ctcgaaaaag
     7681 attcaggcat ctgttttgga tacaaggtgt cgggtaaggt gtggtttgat atgctccgct
     7741 actgcatcaa cttattgaga cgtgcatcag acagaccaaa tcatgcctta gcaaaatttg
     7801 tagttaatct acagattgat gttgaaaata tatgtagccc caaaacagga ctttcttttg
     7861 aacaacttcc gctaggtgaa cgtacaaatt tacttgtgaa tgcctatcat attttgggaa
     7921 tggaagcaga ttctattcgt agtgcaattt atttgtgtgg cggaacacaa aaaaccttta
     7981 tgtttgaaaa atatcctgat ttttggcaag aatttatggc actagcaccc gcaggcccaa
     8041 atagaacacg aaaacgcacc aagccccaaa atgagtctat cacagcaatt aatcgccgtt
     8101 gggagcgttt gaaacgcaaa ctacacttaa ataacgaatg aaaattaatg taataaaacc
     8161 acaggaagaa ccttgctccg cttgtggcaa aatttctcgc atttggcgca gatataatgg
     8221 cgaaggctac tgtgccaatt gctatgctaa gtggtttccg aaaaaagagt gcagctgttg
     8281 ccatcaacca aagcgtatct atttgagttc aacagtatgt tgggattgcg aaaaacagac
     8341 tgactgtgta cgttgcggta aggctgcggg tacattcaaa attggtaaaa ttacccgtta
     8401 tggtgcagtt tgtaatgtgt gttcacgtta ttttcgtgaa gaacgagaat gttttgagtg
     8461 tggtcaacta tctagaacta tgcttcgagc atcagagtca ggtcatagcg agctactctg
     8521 cttgaagtgt tttcaaaaat atcggtttgc gacttgtaaa aactgtcgcc gttatcgcaa
     8581 agttcatgac cgtgataatc agctttgtcg aaaatgtagt gagcaacgaa cttcacaatg
     8641 cccgaagtgc aaacaggata tgcctgcggg atatggtaat atttgtgcag attgttctag
     8701 gcgaactcta ctgttcaacc ttattcgaat gaatgtgcat ttattccgcc acaaaaaagt
     8761 gaaaagagca tataaaaagt tcattttttg gtatctcgca aagtgtggcg tgagtgttgt
     8821 gctgaaaaaa tcagacgacc acgtcctctt ttttatgcgt tgcgatgaaa attggggcaa
     8881 cattccagac taccgtgagt tggttacatt ctttaaaccc aatggattac ggacgcattt
     8941 gactgtgttg cgttggttgc ttgataccaa tcaagtcaaa gtagatgaga gcttaaaaga
     9001 ggaaatggcg gggttggaac gtattcaatc cctatttaac aaattaagta actctgtacc
     9061 ttgtattgca aactactaca cgcagttaca acataaatat gaggcgggca aaacatcact
     9121 gaaatctgtt cgattagctt tacaacctgc gattgatttc atcagttcag aatctgtctc
     9181 gttactgccg actcaagtac aactgaatag ctatcttgtg gcaaaaacgg gacagattgc
     9241 tgctattaca ggctttataa accacctgaa ccgagaatat cattgtgaat tagaaattga
     9301 ccgctccctc attcaaaaga tgaaagaaaa gcagttgaag cagcaagcaa aacagcgatt
     9361 agcgatactc tacaagcaag aaaaactaag tatcaaagag caaaatgagc tactctcagt
     9421 cgtattactg aatttgcaca acatttggat aaaatcaccg aaaaaattaa gtatttcaga
     9481 gatagacggt atagcctact atgttgataa tgagaaaaaa tactttatac caaaagacat
     9541 tcacatacgc ctgatggaat aagctgtcgt caatttttat ttttgcgatc tgtgtcgaga
     9601 aaataatatt tatgaatcga cagatgaaat aatattgata aagtctcttt gtgtgttcaa
     9661 caaacaggag ataaatatga cattaaaggc tcaatttcgt gaatggctta aaaaagagca
     9721 agaacatgat gaaatgatag ggttcgccca tatcccttgc attttatcta aagtggatag
     9781 caaactggcg attgttagcg gaaatgctta tgagaagaaa tatctcagat attggatcaa
     9841 gtgttttagg ttcgatagaa atatcagcaa gtatattaaa taggttaaat atctagct
//
LOCUS       DANLZQ010000094         9876 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.094, whole genome shotgun sequence.
ACCESSION   DANLZQ010000094 DANLZQ010000000
VERSION     DANLZQ010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9876)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9876)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9876
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.094"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(<1..922)
                     /locus_tag="PXE50_002045"
     CDS             complement(<1..922)
                     /locus_tag="PXE50_002045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HDL5622917.1"
                     /translation="MFSDNKALHLGKIYHLIEQFELISRTDLAKLSGLAPASVTNLTK
                     ILIDNHFILERTVQTTLSRGRPSVGLAVSNFFWQLLCVTVSSHKIEISLCKLNGAEIY
                     KQDYTISAENYPRLNDFILNFITNFRQLYCVNTSQLLAVSISVIGKINAEKDSITQLG
                     NKNIFCNITSKLSPLFHCPILLSEHFQLWLLAESTVGSLINQDNAIFLQLDDTVNLSV
                     LLSGSLLSKQSKMNVDNMLMPRFSHLSDEIFPELDEIHRYKLVNQVTFPAIVRLIDRY
                     LPNNLKSQEQKISWLCQKIDENQPLALAILS"
     gene            1056..2174
                     /gene="rnd"
                     /locus_tag="PXE50_002046"
     CDS             1056..2174
                     /gene="rnd"
                     /locus_tag="PXE50_002046"
                     /EC_number="3.1.13.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HDL5622918.1"
                     /translation="MESLIHYQWVETNEQLEAVCEQARKTKVVALDTEFIRTRTYYPI
                     LGLIQLFDGQQVSLIDPNTISDFSPFVSLLADKNIIKVLHACSEDLEVFEYQFKQLPE
                     PMLDTQVMAAFAGIGISMGFAKLVSHYLNIELDKGASRTDWLARPLSAEQLQYAAADV
                     WYLLPVYEKLAQALTKSTWQSAVAEECVALLKKAKQPINKEKAYKNIANAWRLNREEL
                     AILQVLAKWRIEEAQKRNLALNFVVKEASLVQIAKSCPKHTSSLLEFMHPNEVRIHGK
                     KILWLVEQGKAIESNDYPELIQRLVDEKGYKYYMQAMLQKLLEIQPLDIVPELVASKR
                     QLNQLFKWYIDGKPSEKIPELLIGWRKPFGEQLLSVLS"
     gene            2231..2713
                     /gene="lrp"
                     /locus_tag="PXE50_002047"
     CDS             2231..2713
                     /gene="lrp"
                     /locus_tag="PXE50_002047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005695827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-responsive transcriptional regulator
                     Lrp"
                     /protein_id="HDL5622919.1"
                     /translation="MENKKPPKALDAIDLKILNELQRNGKISNIELSKRVGLSPTPCL
                     ERVKRLEKNNVIMGYKALLNPELLDAPLLVIVEITLVRGKPDVFEEFNKAIQQLDEIQ
                     ECHLVSGDFDYLLKTRVADMVSYRKLLGTTLLRLPGVNDTRTYVVMEEVKQTNYLLLK
                     "
     gene            2724..5384
                     /locus_tag="PXE50_002048"
     CDS             2724..5384
                     /locus_tag="PXE50_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HDL5622920.1"
                     /translation="MIEQLKPHLKGKENLIKLMLLLTGFLGVYLLIAWASYSPLDNAW
                     SVASSITQTTLNKTGHFGAWSIDMLYAMFGKVAVLVPIALIIFSIYSLGMGLSVDMKW
                     KTVFIRLASFLLLMVGLAGLFSVLFSNSAYYLSGGFVGGVWETILSDTIGQFGALLIA
                     MLFTIAGLYFCSVQSLLPILTQFYEWIMAKSEESKTAESLQHLQNTEQKQPLVTENEA
                     VEVVDDHKPQFTDISAFKRPNISGLRHSENVEIDNREMYEIERDLELPTINILIQPDM
                     VNQVAEQATSGYELPNEESNVLQMPTIRLNTAIENEVDTIENSSSLEDLKIAESMLPQ
                     IQLDNDIEDTEEAIDDVREITPEFMVTPPKAMKDVSEQPAYPKGYGDTLIHPLLQRKV
                     ITEKPTTPLPTLDLLDKAPIQSQQITEQEIRETSVRLEAELANFGVKATVEDVLVGPV
                     VTRYEIQPAAGVKASKITNLASDIARGLMFKAIRITEVIPNKPYMGIETPNKHRETVW
                     LRDVLDSDEFRNTTATLPMALGKDISGEPVVVDMAKMPHLLVAGQTGGGKSVGVNTMI
                     LSLLFKLTPEQVRFIMIDPKVVELSIYNDIPHLLTPVVTDMKKAANALRWAVEEMERR
                     YLLVSHLQVRNIEGYNAKIDQAAAMNLPIPDPTWRPGDSMDSLPPPLQKLSYIVLIVD
                     EFADLMMSAGKEVEEYIMRIAQKARAVGIHLILATQRPSTDVITGVIKANIPSRIAFT
                     VASQIDSRTILDSGGAEALLGRGDMLYSGAGSPDIIRIHGAFMKDEEVQRVADNWRAR
                     GKPNYLESIVESRSEEADGKNDGGTGDLDPLFDEVVEYITETGSVSISNIQRRFSLGF
                     NRAARIVDQMEAQGIVSEPLKGGKREVLAR"
     gene            5536..6375
                     /locus_tag="PXE50_002049"
     CDS             5536..6375
                     /locus_tag="PXE50_002049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HDL5622921.1"
                     /translation="MRLDDIKESKNVEDRRFNNVGRTKVGRGKGGILTFIIVLVGAYY
                     GVDLTGLMGGGVEYEEQTSALNESEEKQLRTLSAKVLTTTENIWTSYFQQNGLTYKEP
                     SLVLYRGAIQTACGTGQSAMGPFYCPVDQKVYLDLSFYDDMRKKLRASGDFAFSYVIA
                     HEVGHHVQNLLGITSKTQRAQMKASSKAEANQISVNVELQADCFAGVWGHQLAKANRL
                     EEGDVEEAFNAAQAVGDDRLQQQSRGYVVPDSFTHGSSAQRLAWFRKGLTTGNPAVCN
                     TFN"
     gene            6464..7546
                     /gene="aroG"
                     /locus_tag="PXE50_002050"
     CDS             6464..7546
                     /gene="aroG"
                     /locus_tag="PXE50_002050"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HDL5622922.1"
                     /translation="MSYIKNDDVRITSIEELLPPIALLEAYPASDVAAETVAKTRQSI
                     HKILHGADDRLLVVIGPCSIHDPKAALEYAQKIKAMRADPKINQNLEVVMRVYFEKPR
                     TTVGWKGLINDPYLNETFALNDGLRIARKVLSDINDLSVPTAGEFLDMITPQYVADFM
                     SWGAIGARTTESQVHRELASGLSCAVGFKNGTNGSVKIALDAISSAKSPHHFLSVTKF
                     GHSAIVSTAGNPDCHIILRGGDSATNYDADSVAAACAAIEKSGGRPHVMIDFSHANSQ
                     KQFKRQMDVCADVCNQIAGGSDFISGVMIESHLVEGRQDLIEGKGLEALVYGQSITDG
                     CIGWEDSEKALFALAEAVEKRRNFAK"
     gene            7633..8325
                     /gene="tsaB"
                     /locus_tag="PXE50_002051"
     CDS             7633..8325
                     /gene="tsaB"
                     /locus_tag="PXE50_002051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HDL5622923.1"
                     /translation="MKPSILALDTATEACSVALQYNGNITFLDEISPRSHTQRILPMV
                     DELLNQANIELKEVNYLVFGRGPGSFTGVRVGVSVAQGLAMGANLPVVAVSNLKAMAE
                     EAYQKLGATKVIALIDARMNEVYFAQFERKGEEWNEVVAEQVCSPEVAISQFQMSEET
                     VVVGTGWAAYSQFSEQNLPLVISDITLPSSRYMLSIAETEIQKGNIQSAFEIEPVYLR
                     NEVTWEKLPHKQ"
     gene            complement(8342..9151)
                     /locus_tag="PXE50_002052"
     CDS             complement(8342..9151)
                     /locus_tag="PXE50_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDL5622924.1"
                     /translation="MTMTVIIILIICGIIVNITSALFGIGGGVLMMPILHSLFPELPL
                     QVISACSLTIVIGSATINLCLFHHQQIKINRKNVLIWSLAMMLGVQIGFELSFLFSDN
                     SIIAIFILTLLTLSFKTLFHKPRVKAIVPPKPKEAVSNATMCSLGGLIAGITGIGGGS
                     IMAPIVTQIRSVSPKQVAVYTNYMMVIGGIGNLYGYLSRPFVLNSTLATWQIGYVNFA
                     IVGTVVISSLFTVYFSMKLRNILSPELTTKLLGVILFTIACYMGFLQYLFT"
     gene            9250..9801
                     /locus_tag="PXE50_002053"
     CDS             9250..9801
                     /locus_tag="PXE50_002053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HDL5622925.1"
                     /translation="MNNMPTPEQLMSCQLSVMSDLEKGVVIYSQGYHAREFYFLKSGL
                     IGLYHMLENGKESLVRVYKANDYFGFRTFFGDNRYHCSARVLQPAELIRITPLNFIEF
                     WSNNSALIISLLKQLSTELQDAEHRLSMVSYQKTQERVMNSIHYLHQRYPNYHWTNRE
                     IAEFAGCETETAIRLRRELKKIS"
BASE COUNT         3170 a         1759 c         2121 g         2826 t
ORIGIN      
        1 gcgataaaat agctaatgca agcggttgat tttcatcaat tttttgacaa agccagctga
       61 ttttctgttc ctgacttttt aaattattag gcaaataacg atcaatgagt ctcacaatag
      121 ctgggaacgt cacctgattg actaatttat agcgatgaat ttcatctagt tcagggaata
      181 tttcatcact gagatggcta aatctaggca taagcatatt atcaacattc atctttgatt
      241 gtttagacag taaactacca ctaagcaata cacttagatt cacagtatca tctaattgta
      301 gaaaaatagc attatcttgg ttaattaatg agccaaccgt agattctgca agcaaccaca
      361 gctgaaaatg ttcacttaat aaaataggac aatgaaacag cggcgagagt ttagatgtaa
      421 tgttacagaa tatatttttg tttcccaatt gagtaatact gtctttttct gcattaattt
      481 taccgatcac actaatagat acagccagga gctgactagt attaacacaa tatagttggc
      541 ggaaatttgt aataaagtta agaataaaat catttagcct aggataattt tctgctgaga
      601 ttgtataatc ttgcttataa atttctgcac cattgagttt acaaagtgaa atttcaattt
      661 tatgagatga aacagtaaca caaagtagtt gccaaaaaaa attagaaaca gctaatccaa
      721 cggaggggcg acctctggat aaagtagtct gaaccgtacg ttctaaaatg aagtggttat
      781 ctattagtat tttagtcaga tttgttactg aagctggggc taaccccgat agtttagcta
      841 aatctgttct tgaaatgagt tcaaattgct caattaaatg gtatatttta cccaaatgaa
      901 gggctttgtt gtcagaaaac atttaaaatc cttatgttag aatttttaga tgacaattat
      961 tttttgatat gaaaaaaata acaatctttt tttgtttata atgagagaca gatcacataa
     1021 ttatttttta cgtttaaata tttcaggaaa agtatatgga gtctttgatt cactaccaat
     1081 gggttgaaac aaatgagcaa ttagaggccg tatgtgaaca ggccagaaaa acaaaagtag
     1141 ttgccttaga tacagagttt atccgtacac gtacctatta tccgatattg ggtttaattc
     1201 aactctttga tggccaacag gttagcctta ttgatccaaa tacgatttct gacttctcgc
     1261 cttttgtgtc attattagcc gataaaaata tcataaaagt attacatgcc tgtagtgagg
     1321 atttagaagt ttttgagtat caatttaagc aattgccaga gccgatgttg gatactcagg
     1381 tgatggcagc ctttgccggc attggtattt cgatggggtt tgcaaaattg gtttcccact
     1441 acttaaatat tgaactagac aaaggcgctt cccgaaccga ttggcttgcc agaccgctaa
     1501 gcgctgaaca attacaatat gcggcagctg atgtttggta tttattgcca gtttatgaga
     1561 aattggcaca agcattaaca aaaagcactt ggcaaagtgc tgtagcagag gagtgtgtcg
     1621 ctttgttgaa gaaagcgaaa cagcctatca ataaggaaaa agcctataaa aatattgcca
     1681 atgcttggcg attgaatcgg gaagagttag ccatattaca agtattagcg aaatggcgga
     1741 ttgaagaagc acaaaagcgc aatcttgcct taaattttgt cgtgaaggag gcaagtttag
     1801 ttcaaatcgc aaaaagctgt cctaaacaca cttcttcgct gttagaattt atgcacccaa
     1861 atgaagtcag aattcacgga aaaaaaatac tatggttggt tgagcaagga aaagcaatag
     1921 aatcgaatga ttatcctgaa ctcattcagc gcttggtgga tgaaaagggt tataaatatt
     1981 atatgcaagc gatgttgcaa aaattattag aaattcaacc gcttgatatc gtaccggagt
     2041 tggttgcaag taaacgtcaa ttaaatcagc tatttaaatg gtatattgat ggaaaaccat
     2101 cagaaaaaat tcctgaatta ttaatcggtt ggcgaaaacc ttttggtgaa cagctgctat
     2161 cggttttatc ttaaatttca ttcgggttac atagactatg tacagtataa ttgcctaaaa
     2221 aggagtttat atggaaaata aaaaaccacc aaaagcatta gatgcgattg atttaaaaat
     2281 cttaaacgag ctacaacgta acgggaaaat ttctaatatt gaattatcaa agcgagttgg
     2341 gctttctcca acgccctgct tagaacgggt aaaacggcta gaaaaaaata acgtaattat
     2401 gggctataaa gctttactta accctgaatt acttgatgcc cctttactgg tgattgttga
     2461 aattactttg gtgcgtggta agcctgatgt atttgaagaa tttaataaag cgattcaaca
     2521 acttgatgaa attcaagaat gccacctggt atcgggggat tttgattatc tgttaaaaac
     2581 ccgtgtggcg gatatggtat cgtaccgtaa gttattaggc acaacattgc ttcgtttgcc
     2641 cggcgtaaat gacactcgaa cctatgtggt gatggaagaa gtaaaacaaa ccaactattt
     2701 gttgttaaag taaggagaat tgggtgattg aacaacttaa accacaccta aaaggcaaag
     2761 agaacttgat caaacttatg cttttgttga ccggcttttt gggcgtttat ttgctaattg
     2821 cttgggcaag ttatagtcca ttagataatg cttggtctgt tgcaagcagc attacacaaa
     2881 caaccttgaa taaaacaggt cactttggtg cttggagtat tgatatgctc tatgcaatgt
     2941 ttggtaaggt tgcagtttta gtacctattg cattaattat tttctcaatt tatagcttgg
     3001 gaatgggttt aagtgtcgat atgaaatgga aaactgtctt cattcgccta gccagtttct
     3061 tattattgat ggtcggtctt gccgggttat ttagcgtgct tttttcaaac tcagcttatt
     3121 atctgtcggg tggctttgtc ggtggagttt gggagacaat attatctgat actatcggac
     3181 aatttggtgc cttattgatt gcaatgcttt ttactatagc tggcttatat ttttgctctg
     3241 ttcaatcatt attgccaata ttaacgcaat tttatgagtg gataatggca aaatcagaag
     3301 agagcaaaac agctgaatct cttcagcatt tgcaaaatac tgagcaaaaa caaccgcttg
     3361 taactgaaaa tgaagcggtg gaagttgtag atgaccataa accgcaattt accgatatct
     3421 ccgcctttaa acgcccaaac attagtggtt taagacactc ggaaaatgta gagatagata
     3481 accgagaaat gtatgaaatt gaaagagatc ttgagctacc gactattaat attttaatac
     3541 agcctgatat ggttaaccaa gttgcggaac aagctacatc gggctatgag ttaccaaacg
     3601 aagaatccaa tgtattgcaa atgccgacca ttcgcttaaa taccgctatc gaaaacgagg
     3661 tggatacaat cgaaaacagt tcatcattgg aagacctgaa aatagcagaa tctatgttac
     3721 ctcaaattca gcttgataat gatattgaag atactgaaga agctattgac gatgtgcgtg
     3781 aaattacacc ggaatttatg gtaacgccgc ccaaggcgat gaaagatgtg tctgagcagc
     3841 cagcctatcc aaaaggctat ggtgatacgt taattcaccc gttgttacaa cgaaaagtga
     3901 taaccgaaaa accgacaaca ccattgccaa cgctagattt gttggataaa gcaccgattc
     3961 aaagccagca aattaccgaa caggaaatac gagaaacctc tgtgcggcta gaagcagaat
     4021 tagcaaactt tggcgtaaaa gctaccgttg aagatgtatt ggtcggtccg gtagtgaccc
     4081 gttatgaaat ccaaccggct gccggggtaa aagcctccaa aattaccaat ttagcgagcg
     4141 atatagctcg tggcttaatg tttaaagcga ttaggattac tgaagttatc ccaaacaaac
     4201 cttatatggg tattgaaact ccgaataaac accgtgaaac agtgtggttg cgtgatgtgc
     4261 tagacagcga tgaattccgc aataccactg caacattgcc aatggcacta ggtaaagaca
     4321 tcagtggtga gcctgtggtg gtcgatatgg cgaaaatgcc acacttactg gtggcagggc
     4381 agaccggtgg gggtaaatcg gttggggtga atacgatgat tttaagtcta ttgttcaaac
     4441 ttacaccaga acaagtccgc tttattatga ttgaccctaa agtggtggag ctttccattt
     4501 ataacgatat tcctcactta ttaacgccgg tagtaaccga tatgaaaaaa gccgccaacg
     4561 cactacgctg ggcggtggag gaaatggaac gccgttattt gctggtaagc catttacagg
     4621 tgcgtaatat tgaaggctat aatgcgaaaa tcgaccaagc ggcagcgatg aatttgccga
     4681 ttccagatcc aacgtggcga ccgggcgatt caatggatag ccttccgcct ccgctacaaa
     4741 aattaagcta tattgtgctg attgtcgatg agtttgcgga tttaatgatg tctgccggta
     4801 aagaagtgga agagtacatt atgcgaattg ctcaaaaagc ccgagcggtg ggaattcact
     4861 taattcttgc tacccaacgt ccgtcaaccg atgtgattac cggcgtgatt aaagccaata
     4921 ttccaagccg gattgcgttt acagtagcga gccaaattga ctcaagaact attttagatt
     4981 caggtggagc agaggcatta ttagggcgag gcgatatgct ctattcagga gctggcagcc
     5041 cggatattat tcggatacac ggtgcgttta tgaaagacga agaagtgcaa cgcgtggcgg
     5101 ataattggcg ggcaagagga aaaccaaact acttggaaag cattgtggaa tcccgctcgg
     5161 aagaggctga tggcaaaaac gatggcggaa cgggcgattt agatccgcta tttgacgagg
     5221 ttgttgaata tatcacggaa accggttcgg tctctatcag taatattcaa cgccgcttct
     5281 cgcttggttt taaccgtgcg gctagaattg tggatcaaat ggaagctcaa ggcattgttt
     5341 ctgagccact taaaggtggc aaacgagaag tgctggcgag gtaaaacaca tacaagcggt
     5401 tagatttctg tgaaattttg caaattttga caaaaatcta accgattgta tttatctaat
     5461 gctaaataag catagtataa ggctagtctt tgggctaaaa ttaacgcaat ttttacatct
     5521 tttaaggttg aatatatgcg attagatgat attaaagaaa gtaaaaatgt tgaagacaga
     5581 agattcaaca atgtgggtag aactaaggtt ggtagaggga aaggtggaat attaaccttt
     5641 attatcgtgc ttgttggagc ttattatggt gttgacttaa caggtttaat gggcggtggc
     5701 gtagaatatg aggagcagac atcagcatta aatgaaagtg aagaaaaaca gctaagaacc
     5761 ttatccgcta aagtattaac gaccacagaa aatatttgga cttcctactt ccagcaaaat
     5821 ggtctaactt ataaagagcc gtctttggtg ctttaccgtg gggcaattca aactgcctgt
     5881 ggcaccggtc aatctgcaat gggtcctttc tattgccctg tcgatcaaaa ggtttattta
     5941 gatttatcat tctatgatga tatgcgtaaa aaattaagag catcgggcga ttttgccttc
     6001 tcttacgtga ttgcacacga ggttggccac cacgtccaaa atttattggg cataacaagc
     6061 aaaacccaac gggctcaaat gaaagcctca tctaaagccg aagcaaacca aatttcagtc
     6121 aatgtagaat tgcaagctga ctgttttgcc ggcgtttggg gacaccaact cgcaaaagcc
     6181 aaccgattag aggaaggcga tgtggaagaa gcctttaatg ctgcccaagc agttggagat
     6241 gaccgattac agcaacaaag tcgtggctat gtcgtgccgg atagcttcac ccacggctca
     6301 tctgcacagc gtttggcttg gtttagaaaa ggtttaacca caggaaatcc tgcagtttgt
     6361 aatacattta attaaaaaat aattaaatta tttgaaatct ttttattatc gtactactat
     6421 gatagtacga ttttattttc attttattta gagagtgaac acaatgtctt atatcaaaaa
     6481 tgacgatgtc agaattacca gtattgaaga attactacca cctattgcat tactggaagc
     6541 ctatccggca agtgatgttg cagcggaaac cgttgctaaa acccgtcaat caatccacaa
     6601 aattttacac ggtgcggatg atcgcttatt agtggtgatt ggaccttgct ccattcacga
     6661 cccgaaagcg gcattagaat atgcacaaaa aattaaagca atgcgtgctg atccgaaaat
     6721 taaccaaaac ttagaagtgg tgatgcgtgt ctattttgaa aaaccccgta caaccgttgg
     6781 ttggaaaggc ttaattaacg acccttattt gaacgaaacc tttgccttaa acgatggttt
     6841 acgcattgcc cgtaaagtat tatctgatat taatgattta agcgtgccga ctgccggcga
     6901 gtttttggat atgattacac cacaatatgt ggctgacttt atgagctggg gagcaattgg
     6961 ggcgagaacg actgaatctc aagtccaccg tgaattagcc tctggtttat cctgtgcggt
     7021 aggttttaaa aacggcacga atggtagtgt gaaaattgca ttagatgcaa tttcttccgc
     7081 aaaatcgcca caccatttct tatcggtcac taaattcggg cattctgcga ttgtttcaac
     7141 agcaggaaat cctgactgtc acattatttt gcgtggtggc gatagcgcaa ccaactacga
     7201 tgctgactcc gttgcagcgg cttgtgctgc gattgagaaa tccggcggac gtccacacgt
     7261 gatgatcgat ttcagccacg ctaacagcca gaagcagttc aaacgccaaa tggacgtttg
     7321 tgctgatgtg tgcaaccaaa ttgcaggtgg atcagacttt atttcaggtg tgatgattga
     7381 aagccacttg gtagaaggtc gccaagactt aattgaaggc aaaggtttag aggcgttagt
     7441 ttacggacaa agtattacag acggctgcat tggctgggaa gatagtgaaa aagcgttatt
     7501 cgcacttgct gaagcggttg aaaagcgcag aaattttgca aaataatctt ttcttgaacc
     7561 gagggcgaat ataattcgcc ctttatttgt ttaaccttaa agcaaattta atttattcaa
     7621 actaaacata tgatgaaacc cagcattctt gctttagata ctgcaacaga ggcttgctct
     7681 gtagcgttac agtataacgg aaatatcacg ttcttagatg aaatcagccc tcgttcccat
     7741 actcaacgta ttttgccgat ggtagatgaa ttacttaatc aagccaatat cgaactcaaa
     7801 gaagtaaatt atttagtatt cggacgtggg ccgggcagtt ttaccggtgt gagggtcggt
     7861 gtaagtgtgg cacaagggtt ggcaatggga gcgaatttgc cggtggtagc tgtttctaac
     7921 ttaaaagcaa tggcagaaga agcataccaa aaattaggtg caacaaaggt aattgcctta
     7981 attgatgccc gaatgaatga agtttacttt gctcaatttg aacgaaaggg tgaagaatgg
     8041 aatgaagtgg tggctgaaca agtctgttcg ccagaagtcg caataagtca attccaaatg
     8101 agtgaagaga ctgtggtggt tggcacaggt tgggcggcat attcgcaatt ttctgagcaa
     8161 aatctaccgc ttgttatcag tgatattacc ttgccttcca gccgatatat gctttcgatt
     8221 gctgaaactg agattcaaaa aggcaatatc caatctgctt ttgaaataga accggtgtat
     8281 ttgcgtaatg aagttacttg ggaaaaacta cctcataagc aataatctat tgaacttatg
     8341 gttaagtgaa taaatattgc aaaaagccca tataacaggc aatagtgaat aggattacac
     8401 caagtaattt agtagttaat tcgggactca agatattgcg taatttcatt gaaaaataga
     8461 cagtaaagag agaacttatc actacggtgc cgacaattgc aaaattcaca tagccgattt
     8521 gccaagttgc taaggttgaa ttcaacacaa aagggcggga taagtagcca tataaattgc
     8581 cgattccgcc aatcaccatc atatagttag tataaactgc aacctgtttc ggtgaaaccg
     8641 agcgtatttg cgtgacaatc ggagccataa tcgaaccgcc gccaatgccg gtaatacctg
     8701 caattaaacc gcctaaactg cacattgtgg cattagatac tgcttctttt ggtttaggtg
     8761 gtactattgc tttaactctt ggtttgtgaa atagggtttt aaatgaaagt gtcagcaggg
     8821 ttagaataaa gatagcgata atgctgttat cagagaaaag aaaactgagt tcaaacccaa
     8881 tttgtacgcc taacatcatc gcaagtgacc aaatcaacac attttttcga ttgattttta
     8941 tctgttgatg gtggaataag cataaattga tagtggctga accaatcaca atggtaagag
     9001 agcaggcgga aatcacttgg agaggcagtt caggaaacag tgaatgtaaa atcggcatca
     9061 ttaaaacacc cccgccaatc ccaaatagtg cagaagtgat attgactata atgccacaaa
     9121 tgatcaaaat aattatcacg gtcattgtca taatccatct cctaaagtgt gataagtatg
     9181 caaaattttc taaataaagg attatgatcg caatcatata tggaaaaaat aaaataataa
     9241 ggataatcaa tgaacaatat gccaaccccc gaacaattga tgtcttgcca attaagtgta
     9301 atgtctgatc tagaaaaagg agtcgtcatt tattctcagg gttatcacgc cagagaattt
     9361 tattttttaa aaagcggatt aatagggctg taccatatgc ttgaaaatgg taaagagagc
     9421 ttggtgaggg tatataaagc caacgattat tttgggttta gaaccttttt tggcgataat
     9481 cgctaccatt gctcggctcg ggtgttacag ccggcagaat tgatacgtat taccccctta
     9541 aatttcattg agttttggtc gaataattcc gccttaatta tctctctgtt aaaacagctc
     9601 tcgacagaat tacaagacgc agagcatcgt ttatcaatgg tttcctatca aaaaacgcaa
     9661 gagcgggtaa tgaacagtat tcattattta caccaacgtt atcccaatta tcactggact
     9721 aaccgtgaaa tcgccgaatt tgcaggttgt gaaaccgaaa cagccattcg attaaggcga
     9781 gaattaaaga aaatcagtta aattgtcata aattattcat agttgtgatc accatcacat
     9841 atctattatg acaaacatca tattctatcg ttaaaa
//
LOCUS       DANLZQ010000095         9696 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.095, whole genome shotgun sequence.
ACCESSION   DANLZQ010000095 DANLZQ010000000
VERSION     DANLZQ010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9696)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9696)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9696
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.095"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            50..1174
                     /gene="alr"
                     /locus_tag="PXE50_002054"
     CDS             50..1174
                     /gene="alr"
                     /locus_tag="PXE50_002054"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HDL5622926.1"
                     /translation="MKPATATIDSQALRHNIRLIKSFAPQQKLLAMIKANAYGQGLLP
                     AAGTLADMVDGFGVARLREALEIQETGYTGKIVLVEGFFDREELLKTLSRKFDTVIHN
                     LEQLELLEQVAKEWQAEQQKGFWTRKAKIYFPINIWLKIDTGMHRLGIHPEQVDHFVE
                     RLKNCALVNSISFVSHFSRADELDCGYTEKQIAVFEQATQKYQDHDRSISASSGILYW
                     KQAHYDWVRPGIIMHGISPHYTPITDLGFKPVMTLSSSLIAVRTHKAGEPVGYGGAWV
                     SPKDTKLGVTAMGYGDGYPRNAPEGTPVLINGRIVPIVGRVSMDMLTVDLGAESQDKV
                     GDKAIFWGEQLLIEDVAKHIGVISYELITKLTPRVIFEYK"
     gene            complement(1237..1878)
                     /gene="sodA"
                     /locus_tag="PXE50_002055"
     CDS             complement(1237..1878)
                     /gene="sodA"
                     /locus_tag="PXE50_002055"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005708524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Mn]"
                     /protein_id="HDL5622927.1"
                     /translation="MAYTLPELGYAYDALEPHFDAKTMEIHHSKHHQAYINNANAALE
                     AHPELLEKCPGALIKDLSQVPAEKRIAVRNNVGGHVNHTLFWKGLKTGTTLQGALKEA
                     IERDFGSVEAFQSEFEKAATTRVGSGWAWLVLEEGKLAVVSTANQDNPLMGKEVAGVS
                     GYPILVLDVWEHAYYLNYQNRRPDFIKAFWNVVNWDEAARRFEEKVATCGCAK"
     gene            2322..4778
                     /gene="thrA"
                     /locus_tag="PXE50_002056"
     CDS             2322..4778
                     /gene="thrA"
                     /locus_tag="PXE50_002056"
                     /EC_number="1.1.1.3"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate kinase/homoserine
                     dehydrogenase I"
                     /protein_id="HDL5622928.1"
                     /translation="MRVLKFGGTSLANPERFMQAAEIIEKAHLADQAAGVLSAPAKIT
                     NHLVAIVDKAIAGESFQSNLSEATEIFHNIINGLYATNNHFAKEALLALVEAELNQIQ
                     QVAAEAAQTKSLSDKIAATIHCRGEKLSIAMMQAWFEAKGYEVTRIDPVEKLLAHGSY
                     LESSVDIAESTKRVDAGSIPKKNIVLMAGFTAGNEQGELVLLGRNGSDYSAACLAACL
                     KADVCEIWTDVDGVYTCDPRLVPDAVCLETMSYQEAMELSYFGAKVIHPRTIGPLVPL
                     NIPCLIKNTGNPDGKGTLIDGNVANDNLKVKGITNLDNVAMFNVSGSGMQGMVGMAAR
                     VFSTMSKAGISVILITQSSSEYSISFCVPAKSAEKALAALNTEFAQELSENLLDPIDI
                     IKDLSIVSVVGDGMRTAKGIAARFFSALAQANISIVAIAQGSSERSISAVVPLNKAIE
                     AVKATHKSLFNSKRVVDMFLVGVGGVGSELIEQVKQQKEFLAKKDIEIRVCALANSDK
                     MLLNENGLNLDNWKEDLEKAIQPSDFDVLLSFIKFHHVVNPVFVDCTSAQSVANLYAR
                     ALKEGFHVVTPNKKANTSGYDYYLEMRENARQSQHKFLYETNVGAGLPVIENLQNLLA
                     AGDEVEKFEGILSGSLSFIFGKLEEGLTLSQATLIAKEKGFTEPDPRDDLSGADVARK
                     LLILVRETGLPLEFEDIKIEGVLPKGFSEGMSRDEFLQALPSLDEEFSKRVEAAKAEG
                     KVLRYVGSITGDKCRVAIEAVDENHPLYKVKDGENALAFLTRYYNPIPLLLRGYGAGN
                     SVTAAGIFADILRTLQGGVN"
     gene            4778..5725
                     /gene="thrB"
                     /locus_tag="PXE50_002057"
     CDS             4778..5725
                     /gene="thrB"
                     /locus_tag="PXE50_002057"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HDL5622929.1"
                     /translation="MALRIYAPASSANISVGFDSLGAAISPIDGSLLGDVVQIEESEQ
                     QFELESAGYFVRKLPKEPQKNIVYQAYVLFSERLKLRNGSVKNLRLTLEKNMPIGSGL
                     GSSACSIVAALVALNKFHDEPFSKMELLEMMGELEGRISGSIHYDNVAPCYLGGLQLM
                     TQSLGNICQPLPFFDEWYWVLAYPGVEVSTAEARAILPKSYTRQDMIQQARYLGSFVH
                     ACHTHQDILAATMMKDLIAEPYREDLLPNFPAVRQGCKDLGALAVGISGSGPTMFAIA
                     PDLEHAQRLVSYLEKEYLQNNEGFIHICKVDNQGARELK"
     gene            complement(5840..7216)
                     /gene="cysS"
                     /locus_tag="PXE50_002058"
     CDS             complement(5840..7216)
                     /gene="cysS"
                     /locus_tag="PXE50_002058"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HDL5622930.1"
                     /translation="MLKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTF
                     VSFDVIARYLRYSGYNLRYVRNITDVDDKIIKRALENNETCDELVDRMIAEMHKDFDA
                     LNILRPDVEPRATKHIPEIIAMVEKLIHNGHAYVAADGDVMFDVESFQKYGALSRQNL
                     EQLQAGARVEIKSIKKNPMDFVLWKMSKAGEPSWESPWGNGRPGWHIECSAMNSKELG
                     EHFDIHGGGSDLMFPHHENEIAQSCCAHGGDYVNYWLHTGMLTIDKEKMSKSLGNFFS
                     IRHMLGLYDAESLRYFFLTAHYRSLLDYSIDNLDLARSALERLYTALRGCDVSGEAIG
                     EHYVEAFKTAMDDDFNTPGALAVLFEIARELNKLKTEDMAKANGLAVRLKELAGVLGL
                     LEQDPDAFLKGDANDDETAEIEALIKQRNEAKAAKNWAVADEVRDKLKAINIVLEDTP
                     NGTIWRKA"
     gene            7372..7881
                     /locus_tag="PXE50_002059"
     CDS             7372..7881
                     /locus_tag="PXE50_002059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HDL5622931.1"
                     /translation="MITLHTNFGDIKIELNFEKAPITAKNFEDYAKEGFYNGTIFHRV
                     IDGFMIQGGGMTAGMAEKPTKDPIQNEANNGLSNKRGTIAMARTSDPHSASSQFFINV
                     ADNTFLDYRSKEMFGRSVVQDWGYAVFGEVVEGMDVVDKIKGVKTGNKGFHQDVPVED
                     VVIESVSVA"
     gene            complement(7973..8902)
                     /locus_tag="PXE50_002060"
     CDS             complement(7973..8902)
                     /locus_tag="PXE50_002060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HDL5622932.1"
                     /translation="MEIALLLADKILQLTLMVLLGYLIVKTKLLKSEHSYPISVIGLY
                     IISPAMLITAFQVDYTTEILNGLYLAFLISVLLNGLLILLGWLLKRALKLDNIEQATA
                     IYSNSGNLIIPIVASLFGNEWVIYSTAFIVVQNVLFWSHLRLLICGKGNVPFRKMIFN
                     INIIAIVIGMMLFLLHIKLPATLANTLSTLGHMLGPLAMLVAGMLIAAIPFKEIITDK
                     RIYLVAFLRLIFIPLILLAVIKLGGFASWIENGKTVVMITFLATISPSAATATQMAVA
                     YGQDAKKASAIYGVTTLLCVFTMPLIIWLYQFL"
     gene            complement(8905..9663)
                     /gene="fdhD"
                     /locus_tag="PXE50_002061"
     CDS             complement(8905..9663)
                     /gene="fdhD"
                     /locus_tag="PXE50_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HDL5622933.1"
                     /translation="MKQKDDEENLISEVPVALVYNGISHTVMMATPANLEDFALGFSL
                     AEGILNAPSELYGLDVIEQENGVEIQLEISSRQFVALKDKRRSMAGRTGCGICGVEQL
                     EQVNQSCKIVKKNNRLQNVNPLILEDCLLQLENAQFLSKETGASHAAAFFTPDGKLLA
                     IREDVGRHVALDKLIGWYAKADFPIGFVFVTSRASFEMVQKCLAVGIEMLCAISATTE
                     MAVNMARENQFTLLAFARKGKATIYAGEERLALN"
BASE COUNT         2837 a         2063 c         2041 g         2755 t
ORIGIN      
        1 ttaggcgtat aatttagcct ttcttgtgat tttaactatg tagataagta tgaaaccagc
       61 aacagcaacc attgatagtc aagccctccg ccataatatt cgcctgatca aatctttcgc
      121 tccacagcaa aaattattgg cgatgatcaa agccaatgct tacgggcaag gcttattgcc
      181 ggctgccggc acattagcag atatggttga tggctttgga gttgcccgtt tgcgtgaagc
      241 cttagaaatt caagaaaccg gatacacagg caaaattgtg ttagttgaag gtttttttga
      301 ccgagaagag ctactcaaaa ccctttcccg caagtttgat accgtcattc ataacctcga
      361 acaactggaa ttactcgagc aagtagcaaa agaatggcag gcagagcaac aaaaaggctt
      421 ttggactcgt aaagcgaaaa tctacttccc gattaacatt tggctaaaaa tcgacaccgg
      481 aatgcaccgc ttaggcattc acccggagca agtcgatcac tttgttgaac gtttgaaaaa
      541 ttgtgccttg gtcaattcaa tcagctttgt gagtcatttt agccgtgccg atgaactcga
      601 ttgtggctat accgaaaaac aaattgcggt gtttgagcaa gctacgcaaa aatatcagga
      661 tcacgaccgc agtatttccg cctcaagcgg tattctttat tggaaacagg ctcattatga
      721 ttgggttcgc ccgggtatta ttatgcacgg catttctccc cactatacgc cgattaccga
      781 tttaggtttt aagccggtaa tgacgctctc ctcttccctg atcgctgtgc gtacccataa
      841 agccggcgag cctgtaggct atggtggtgc ttgggtaagc cctaaagata ccaaactcgg
      901 cgtgactgca atgggctacg gcgatggcta ccctcgcaat gctcctgaag gtacccctgt
      961 gttgattaac ggtagaatag tgccgattgt cggtcgagtt tcgatggata tgctgacggt
     1021 cgatttaggt gcagagagcc aagataaagt gggcgataaa gccatttttt ggggagagca
     1081 actattaatt gaagatgtgg cgaaacacat tggcgtgatt agctatgagc tgattactaa
     1141 actcactcct cgtgtgattt ttgaatataa atagacaaca agcggtaaaa ttttcaacaa
     1201 attttaccgc ttgtatctta ttcaagatcg aaaatattat ttcgcacaac cgcaggttgc
     1261 tactttttct tcaaaacggc gagcggcttc gtcccagttt acaacgttcc agaatgcttt
     1321 aatgaaatcc ggacggcggt tttggtagtt taagtagtaa gcgtgttccc aaacgtctaa
     1381 gactaaaatc ggatagcctg aaacgcctgc cacttcttta cccattagtg ggttgtcctg
     1441 gttagcggtt gaaacaacgg ctaatttacc ctcttctaat actaaccacg cccagcctga
     1501 accaacacga gtagtcgctg ctttttcaaa ttctgattgg aaagcttcaa ctgaaccgaa
     1561 atcacgctca atcgcttctt ttaatgcacc ttgtaaggta gtgcctgttt ttaaaccttt
     1621 ccagaataaa gtgtggttta catgaccacc tacgttgtta cgcactgcaa tacgtttttc
     1681 tgcaggcact tggctcaaat ctttgattaa tgcacccgga catttttcta ataattcagg
     1741 gtgagcttct aatgctgcat ttgcattgtt gatgtaagct tggtgatgtt tagaatggtg
     1801 gatttccatt gttttagcat cgaaatgtgg ctctaacgca tcataagcgt agcctaattc
     1861 tggtaatgta tatgccatag ttaattcctc tcaaatagta aataggttaa tcagagttaa
     1921 actccgagta cattttatca agaaacacac aaaaaatgca catttttttg atctagaaca
     1981 aaattatttc actatctaat ttagaaaggt tcctaatcaa attcttgctt ttaattgttt
     2041 tatatagaaa gacaaagaaa tttaaaaaaa tgtggtgaaa aacagcgtta agcccattga
     2101 caaaggcatt attttcacgc attcttgaac cattattcac tctcttgacc gagattccgc
     2161 caatgaattg ttttaatatg atgacaacga ttattaccac cattatgtca ccaacatagt
     2221 gcgggtttta attggctgaa ataatgaaag aataaaccga aaacccgcta caagcgggtt
     2281 tttttgtata aaaatttaca aataatttat caggagtaac tatgcgagtt cttaaatttg
     2341 gaggcacttc tcttgccaac cctgaacgct ttatgcaagc ggcagagatt atcgagaaag
     2401 ctcatttggc agatcaagct gccggcgtat tatccgcccc agccaaaatt accaatcatc
     2461 ttgtcgctat tgtagataaa gcgattgccg gtgaatcatt tcaatctaac ctttctgaag
     2521 ctaccgagat tttccacaac atcattaacg gcttatatgc tacaaataat cactttgcta
     2581 aagaagcact gttagcctta gtggaagcgg aattaaacca aattcagcaa gtggctgcag
     2641 aagcagctca aactaaatcg ttgtcagata aaattgctgc cactattcac tgccgtggtg
     2701 aaaaactctc tattgcgatg atgcaagcgt ggttcgaggc aaaaggctat gaagtcactc
     2761 gtatcgaccc tgttgaaaaa ttattggctc acggcagcta tttggaatct tcggtcgata
     2821 ttgccgaatc caccaagcga gttgatgcag gttcaattcc aaagaaaaat atcgtgctaa
     2881 tggctggttt taccgcaggt aatgagcaag gcgaactggt gttattaggg cgtaacggtt
     2941 cagattattc tgccgcttgt ttggcagcgt gtttaaaagc cgatgtttgt gaaatctgga
     3001 cggacgtaga tggcgtttac acctgcgacc ctcgtttggt gcctgatgca gtatgcttag
     3061 aaacaatgag ctatcaagag gcaatggagc tttcctactt tggggcgaaa gtgatccacc
     3121 ctcgcaccat cgggccatta gtgccgctca atattccttg tttaatcaaa aataccggca
     3181 atccggacgg aaaaggcaca ttaattgatg gcaatgtggc aaacgataat ctcaaagtaa
     3241 aagggattac caaccttgat aacgtggcga tgttcaacgt ttcaggttca ggaatgcagg
     3301 gaatggtggg catggctgcc cgtgtgttct cgacgatgtc aaaagccggt atttcggtga
     3361 ttttaattac ccaatcatca tcagaatata gcatcagctt ctgcgtgccg gcaaaatcgg
     3421 cagaaaaagc gttagcggct ctaaatactg aatttgcaca agagttatct gaaaacttac
     3481 ttgacccgat tgatattatt aaagatttat ccattgtttc ggtagtgggt gatggtatgc
     3541 gtaccgccaa aggaattgcg gctcgcttct tctctgccct agcccaagcc aacatcagta
     3601 ttgtggcaat tgcacagggt tcatctgagc gttccatttc tgctgtcgtg ccgttaaaca
     3661 aagcgattga agcagtaaaa gcaactcaca aatcgctatt taacagtaaa cgtgtggtgg
     3721 atatgttttt agtgggtgta ggcggtgtgg gtagcgaact catcgagcaa gtcaaacaac
     3781 aaaaggagtt tttggcaaag aaggatattg agatccgtgt gtgtgcttta gctaattcag
     3841 ataaaatgtt actcaacgaa aacggcttaa atttagacaa ctggaaagaa gatttagaaa
     3901 aagcaattca gccgtcagac tttgatgtat tgctttcttt catcaaattc caccacgtgg
     3961 taaacccagt atttgtagat tgcacttcgg cacaatcggt ggcgaacctg tacgcacgag
     4021 ccttaaaaga gggcttccac gtggtaacac caaacaaaaa agccaataca tcaggttacg
     4081 attactactt agaaatgcgt gaaaacgccc gccaaagcca gcacaaattc ctctacgaaa
     4141 ctaatgtagg ggcaggttta ccggtaattg aaaacttaca aaacctatta gctgccggtg
     4201 acgaagtaga gaaatttgaa gggattttat ccggctcgct ctctttcatt ttcggcaaat
     4261 tagaagaagg tttaaccctt tcgcaagcaa ctttaatcgc caaagaaaaa ggctttaccg
     4321 agccagatcc acgagatgat ttatccggtg cagatgttgc tcgtaaactc ttaattcttg
     4381 ttcgtgaaac cggcttaccg cttgaatttg aagatattaa aattgaaggc gtattgccaa
     4441 aaggcttctc ggaaggaatg agtcgtgatg agtttttaca agctctaccg tctttagacg
     4501 aagaattcag caagcgtgta gaagctgcca aggctgaagg caaagtgttg cgttatgtgg
     4561 gctcgatcac aggtgataaa tgccgagttg ccattgaagc cgtggacgaa aaccacccac
     4621 tttacaaagt taaagacggc gaaaatgccc ttgcttttct cacacgttac tacaacccta
     4681 ttccattatt attgcgtggg tatggtgcgg gcaatagcgt aaccgctgcc ggtatctttg
     4741 cagatattct gcgtacttta caaggaggag tgaactaatg gcgttacgaa tttatgcccc
     4801 agcttcaagt gcaaatatta gtgtgggttt tgactcatta ggcgctgcaa tctccccgat
     4861 tgacggctct ttgctcggcg atgtagttca aattgaagag agtgaacaac aatttgagct
     4921 agaaagtgca ggttattttg tacgtaaatt gcccaaagaa ccacaaaaaa acattgtcta
     4981 tcaagcctat gtgctattta gcgaacgctt gaaattacgt aacggcagtg taaaaaattt
     5041 acgcttaaca cttgaaaaaa atatgccgat tggctcaggg ctaggctcaa gtgcctgctc
     5101 gattgttgca gcattagtgg cactcaataa attccacgat gaaccgttct ccaaaatgga
     5161 attactggaa atgatgggcg aattggaagg cagaatttca ggctcaatcc actacgacaa
     5221 cgttgcccct tgctatttag gtggcctgca attaatgaca caatcgctcg gcaatatttg
     5281 ccaacctctg ccattctttg atgaatggta ttgggtgctt gcctacccgg gcgtggaagt
     5341 atcaaccgcc gaagcccgtg ctattttgcc gaaaagctat actcgtcaag atatgattca
     5401 gcaagcccgc tacttaggat ctttcgtcca tgcttgccat acacatcaag atatcttggc
     5461 tgctacaatg atgaaagacc taattgctga gccttaccgt gaagatttac tgccgaactt
     5521 tccggctgtt cgtcaaggct gtaaagactt aggtgcgtta gcggttggta tttcaggttc
     5581 cggtccgaca atgtttgcga tagcccctga tctcgaacac gctcaacgtt tagtgagcta
     5641 tttagagaaa gaatatctgc aaaacaacga aggctttatt catatctgta aagtcgataa
     5701 tcaaggagca agagagctga aatagccctc tcgaacaacc atatcactaa ataacttaaa
     5761 ggactgactc caataccact tggagcagcc ctttttgatt aattttttga aaagtctatc
     5821 acttataaac aatcgaaggc tatgccttac gccaaattgt gccgtttggg gtgtcttcga
     5881 ggacaatatt tatcgctttg agcttatctc gcacttcatc ggcaaccgcc cagtttttag
     5941 ccgctttggc ttcgttgcgt tgtttgatta aggcttcgat ttctgccgtt tcatcgtcat
     6001 tcgcatcacc ttttaaaaac gcatcggggt cttgttccag taagcctagc acgccggcta
     6061 actcttttaa acgaacggct aaaccgttgg cttttgccat atcttcggtt ttgagtttgt
     6121 tcaactcacg ggcaatttca aataacaccg ctaatgcccc cggggtgttg aaatcatcgt
     6181 ccattgcggt tttaaaggct tctacatagt gttctccgat ggcttcgccc gacacatcac
     6241 aaccacgcag agcggtatat aaacgctcaa gagccgaacg ggctaaatca aggttgtcaa
     6301 tgctgtaatc taataacgaa cggtaatgag cggttaagaa gaaataacgt aacgattcgg
     6361 catcgtataa gcctaacata tggcgaatgc tgaagaaatt gcccaaagat ttcgacattt
     6421 tttctttatc aatggtaagc attccagtgt gtaaccaata attgacataa tcgccaccgt
     6481 gagcacagca agattgtgca atttcgtttt cgtgatgcgg gaacattaaa tccgagccac
     6541 cgccgtgaat atcaaaatgt tcgcccaact ctttgctatt cattgccgaa cattcaatat
     6601 gccagcccgg tctgccattg ccccacgggc tttcccagct tggctcaccg gctttcgaca
     6661 ttttccacaa gacaaaatcc atcgggtttt tcttgatgga tttaatttca acccttgcac
     6721 cggcttgtag ttgctctaaa ttttggcggg ataatgcacc atatttctgg aacgattcca
     6781 catcaaacat cacatcgcca tcggctgcga cataagcgtg tccgttgtga atcagttttt
     6841 ctaccatcgc aataatttca ggaatatgct tggtggctcg tggctcaacg tccgggcgaa
     6901 gaatgtttaa cgcatcaaaa tctttgtgca tttcagcaat cattctatcc actaattcat
     6961 cgcaagtttc gttattttct aacgcacgtt tgatgatttt gtcgtccaca tcggtaatgt
     7021 tacgcacata gcgtaaattg tagcctgaat aacgtaaata acgggcaatc acatcgaaag
     7081 agacaaaagt gcgaccgtgc ccaaaatgac aaagatcgta aaccgtgacg ccacagacgt
     7141 acattcccac ctgatttggg ttaatcggtt taaattcttc tttttcacgt tttaaggtgt
     7201 tataaatttt gagcataaag tcctcttgtg taacattcag taacaaatgg ggctaagtat
     7261 agcgaataag cggtctgatt ttgagatttt tttgcaattt ggcgtaaact ttttaataat
     7321 agcgagcgaa atttattttc cattccattt ttatttataa aggaacaaag aatgattaca
     7381 ttacatacca atttcggtga cattaaaatc gaattaaact ttgaaaaagc cccgattacc
     7441 gctaaaaact ttgaagatta cgctaaagaa gggttttata acggcacgat tttccaccgt
     7501 gtgattgacg gctttatgat tcaaggtggc ggaatgacgg caggtatggc tgaaaaaccg
     7561 acaaaagatc cgattcaaaa cgaagcgaac aacggtttaa gcaacaagcg tggcacaatc
     7621 gcaatggctc gcacttctga tccgcattct gcttcgtcac agtttttcat taatgtggcg
     7681 gataatactt tcttagatta tcgctcaaaa gagatgttcg gcagaagtgt agtgcaagat
     7741 tggggctatg cagtatttgg cgaagtggtt gaaggtatgg acgtggtcga taaaatcaaa
     7801 ggcgtaaaaa ccggcaataa aggcttccac caagacgtgc cggttgaaga tgtggtgatt
     7861 gagtctgtaa gcgttgccta attccgcaaa ttagcctaca agcggttgat ttttcacaat
     7921 tttttgcatt tctcagcgtt gcaaaaaagt agcagaaatc gactgcttgt ttttatagaa
     7981 attgatacag ccaaataatc agcggcattg taaacacaca aagtaaagtg gttacgccat
     8041 aaatcgcact ggcttttttg gcatcttgcc cgtaagccac cgccatttgg gtcgccgttg
     8101 cagcagaagg gctgatggtg gctaagaatg taatcattac caccgttttt ccattctcta
     8161 tccagctcgc aaaaccgccg agtttaatca ccgctaacaa aatcagcgga ataaaaatca
     8221 agcggagaaa agccaccaag taaatgcgtt tatcggtaat aatctcttta aatggaattg
     8281 ctgcaattaa catccctgcc acaagcattg ctaaaggccc taacatatgc cctaaagttg
     8341 agagcgtgtt tgcaagcgta gcgggcagtt tgatatgtag caaaaacaac atcataccaa
     8401 tcacaatcgc aataatgttg atattaaaga tcatctttct aaacggcaca ttgcctttgc
     8461 cacaaatcag cagccgtaag tgagaccaaa acaacacatt ttgcaccaca ataaaagccg
     8521 ttgaataaat cacccattca ttgccgaaca gggaggcaac aatcggaata attaagttgc
     8581 cggagttgga ataaatagcg gtggcttgtt ctatgttgtc taatttcaac gctcttttga
     8641 gcagccaacc aagcagaatt aacaagccgt ttaataagac ggagattaaa aatgccagat
     8701 acaagccgtt tagtatttcg gtggtgtaat ctacttgaaa agcagtaatc agcattgccg
     8761 ggctgataat gtaaagtccg ataaccgaaa tcggataact gtgctccgat ttgagtaatt
     8821 tagttttaac gatgaggtag ccgagcagca ccatcagggt taattgtaga attttatcgg
     8881 ctaataaaag ggctatttcc attatcaatt aagagcgagt ctctcttctc ctgcataaat
     8941 ggtcgctttg cctttgcggg caaaagcaag taaggtaaat tgattttcac gagccatatt
     9001 cactgccatt tcagtggtcg ctgagatggc acacaacatt tcaatgccaa cggctaagca
     9061 tttctgcacc atttcaaagc tggcacgact ggttacaaac acaaatccaa tcggaaaatc
     9121 agctttagca taccaaccga ttaatttatc caacgccacg tgtctgccca catcttcacg
     9181 aatggcaagc agttttccat ccggggtaaa aaatgcagcg gcgtggcttg caccggtttc
     9241 tttcgataag aattgagcat tttctagctg taataaacaa tcctctaaaa tcagtggatt
     9301 gacgttctgc aagcggttat ttttcttaac aattttgcaa ctttgattaa cctgctctaa
     9361 ttgctctaca ccgcaaatac cgcaacctgt tctgcctgcc attgagcggc gtttatcttt
     9421 taatgcaaca aattggcggc tcgatatttc aagctgaatt tctactccat tttcttgttc
     9481 aattacatct aaaccatata attccgatgg ggcatttaaa atcccttccg ccaatgagaa
     9541 tcctaaagcg aagtcctcca aattagccgg tgttgccatc attacagtat gagaaatacc
     9601 gttatatacc aaagcaaccg gcacttctga aattaaattt tcttcatcat ctttttgttt
     9661 aatactatta gttgataatg ataatttttt ggcatt
//
LOCUS       DANLZQ010000096         9518 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.096, whole genome shotgun sequence.
ACCESSION   DANLZQ010000096 DANLZQ010000000
VERSION     DANLZQ010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9518)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9518)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9518
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.096"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..322
                     /locus_tag="PXE50_002062"
     CDS             <1..322
                     /locus_tag="PXE50_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622934.1"
                     /translation="QQNKYDSIINKAKNQNSQENNLTEINSNIQILAEKHQLTIESLQ
                     WNLEQGKSIELSIIGNSRSLFDFIHSVKQIPYLKYNAISLIKSRQDRKVEMNTTLVIL
                     ANKE"
     gene            325..738
                     /locus_tag="PXE50_002063"
     CDS             325..738
                     /locus_tag="PXE50_002063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622935.1"
                     /translation="MRNWFLFITLFISFSVKANDPFFGEKQETQASGNIAESNVEFAK
                     NTENITACKVPDNLSAKNIVTDFDKMTLIGLVKINEVMRALFIDEKQQLLALKENDLL
                     NNEIEIKHINLKSITYINWKLTKDCNIPYEINIKL"
     gene            747..2060
                     /gene="pilQ"
                     /locus_tag="PXE50_002064"
     CDS             747..2060
                     /gene="pilQ"
                     /locus_tag="PXE50_002064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus secretin PilQ"
                     /protein_id="HDL5622936.1"
                     /translation="MWRIFIYFLCGFSLAYANTISIVLKNAPTSLIFTYLAEETGKNM
                     VLDDNIETKSTLRLENKSVDEIFKTLGKVNKLSLTQEDDIVYIHKKEEKAADLTPLPI
                     MNLQNNGQNTPLVTAPKLITKTLKLHYAKASEVIESLTKGSGTFLSENGYIHFDERSN
                     SLIVKDSAKSLKNIENLVKQLDQPTEQIAIEARIVTISSEHLQELGVRWGIFSRGAGH
                     YKFGGRLEGNGLNNVTNNLNVNFPITGGASAVLQVSSINSRVLDLELSALEQENSVEI
                     IASPRLLTTNKKPASIKQGTEIPYVMYNTKSEATDVEFKEAVLGLEVVPHLSTQNQIL
                     LDLIVTQNSPNSQSGSSGLITIDKQELNTQVFAKHGETIVLGGIFQHLTQKGEDKVPI
                     LGSIPFIKRLFSQTRDKISKRELVIFVTPYILQSNEKSSNRKKSK"
     gene            2141..2554
                     /gene="nusB"
                     /locus_tag="PXE50_002065"
     CDS             2141..2554
                     /gene="nusB"
                     /locus_tag="PXE50_002065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HDL5622937.1"
                     /translation="MKISPRRRARECAVQAIYSWYISQNTVEEVELAFVTDQDMKGVD
                     MPYFRKLFRGVVDNVEAIDEALRPYLDRKESDVDPIERSILRLSTYELKFEHDVPFRV
                     VINEGIEVAKVFGSDDSHKYINGILDKLAPALGRK"
     gene            2617..3597
                     /gene="thiL"
                     /locus_tag="PXE50_002066"
     CDS             2617..3597
                     /gene="thiL"
                     /locus_tag="PXE50_002066"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HDL5622938.1"
                     /translation="MGEFDIIERYFNASQRPPRKDVLLSIGDDCALTSLKPNQQLAIT
                     TDTLVCGTHFLPTISPADLAYKSVASNLSDLAAMGAEPAWISLALTLPEINHDWLAEF
                     SEHFFEILDHYNVDLIGGDTTCGPLSLTITAQGIVPQDRGLFRHNAKVGDWIYVSGTL
                     GDSAGGLQLLLNQQSEQVNWNKEQSYLIQRHLRPTPRVLLGLTIASIANAAIDISDGL
                     LSDLSHILKRSDCGAVLNLENFPLSDVLLSCYSRTEAEYFALNGGEDYELCFTVPNDN
                     KAKLDKALANIGVTYTCIGQIRSAKEGLTLLRHNQPVTLPSQRGYDHFKK"
     gene            3602..4075
                     /locus_tag="PXE50_002067"
     CDS             3602..4075
                     /locus_tag="PXE50_002067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HDL5622939.1"
                     /translation="MKPINLKNPIHFFAFGFGSGLLKPAPGTWGSLAGLIVAIALWSI
                     TQSALFFGLLTLVSFIAGCVICTKASQDLEVHDDGRIVWDEIVAIFLMFTCLPEYNLL
                     GYLLAFISFRIFDILKPFPIRYFDEKLESGLGIMFDDILAAIFALISLHLLYYFI"
     gene            4082..4705
                     /locus_tag="PXE50_002068"
     CDS             4082..4705
                     /locus_tag="PXE50_002068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HDL5622940.1"
                     /translation="MLTILFIHFAGLISPGPDFFYVVRQSASHSVKSGVLAATGISIG
                     IIFWAAFAIFGLAWLSNSIGSLFQYAIMIIGGCYLVYIGSQMVRVTENIIFVENKAQL
                     TPLNPWQEIKKGLLINIFNAKAGVYFTSVISAYVDNLSNTLQMFELLLLFVVSTFIYF
                     CVVALLFSRRPVRLFYAKYSRYIDNISGVIFILFGSMLIYEGFSHFI"
     gene            4817..5422
                     /gene="ruvA"
                     /locus_tag="PXE50_002069"
     CDS             4817..5422
                     /gene="ruvA"
                     /locus_tag="PXE50_002069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005686751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HDL5622941.1"
                     /translation="MIGRLHGKIIEKQPPEILLDVQGVGYELLLPMTSFYSLPQIGEE
                     ATIFTHLVVREDAHLLFGFAQKQDRTLFRELIKTNGVGPKLALAILSAMSVSQFATAI
                     ENEELAKLTKIPGIGRKTAERLLVELKGKFKGMAQSDFFVEVSHEQIVASNTPDPANE
                     ALDALIALGYKPADAEKMIKKVNKSGATSEQLIREALKNSL"
     gene            5559..6563
                     /gene="ruvB"
                     /locus_tag="PXE50_002070"
     CDS             5559..6563
                     /gene="ruvB"
                     /locus_tag="PXE50_002070"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HDL5622942.1"
                     /translation="MIEADRIISASPKREEEVIDRAIRPKLLADYVGQPSVHDQMEIF
                     IKAAKLREEALDHLLIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAAMLT
                     NLEPYDVLFIDEIHRLSPAIEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGA
                     TTRAGSLTSPLRDRFGIVQRLEFYSVDDLTLIVKRSADCLNLNLSADGAYEVARRSRG
                     TPRIANRLLRRVRDYADVRNNGIITSDIAKQALAMLDVDSEGFDFMDIKLLQAIVERF
                     DGGPVGLDNLAAAIGEERDTIEDVLEPYLIQQGFLQRTPRGRIATSRTYAHLGITQID
                     "
     gene            complement(6662..7345)
                     /gene="artM"
                     /locus_tag="PXE50_002071"
     CDS             complement(6662..7345)
                     /gene="artM"
                     /locus_tag="PXE50_002071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter permease ArtM"
                     /protein_id="HDL5622943.1"
                     /translation="MWWDYLVEISQGIGTSLQLTFVALIIAFILAIILTFILSLENRP
                     LKWLVNGFITLFTGTPLLIQFFLIYSGPGQFEWITESAAWVLLSDAWFCAMLALALNS
                     AAYSTLLFHGAVKAIPKGQWETCAALGLSRLDTLKILVPYALKRALPSYSNEIVLVFK
                     GTSLASTITIMDIMGYARQLYGTEYDALSIYGMAGVIYLVITGIMTIVLRKLESRVLA
                     FERFETEKA"
     gene            complement(7345..8016)
                     /gene="artQ"
                     /locus_tag="PXE50_002072"
     CDS             complement(7345..8016)
                     /gene="artQ"
                     /locus_tag="PXE50_002072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter permease ArtQ"
                     /protein_id="HDL5622944.1"
                     /translation="MSSDILNLLVNATLMTLGIALASLLIGMLLSIFFVVLETSKIAC
                     IRKPTSIIITLLRGLPEILVVFLIYFGLIQVIFLITDEFAELNAFWCGAIALGIIFAA
                     YASQSLRGAIKAIPVGQWESGTALGLSRAQVFVRIILPQVWRHALPGLSNQWLVLLKD
                     TALVSLIGVDDLMRQSELINANTHQPFTWYGIAALIYLAITLISQRVIKVLEGRFTRF
                     ERGVA"
     gene            complement(8016..8741)
                     /locus_tag="PXE50_002073"
     CDS             complement(8016..8741)
                     /locus_tag="PXE50_002073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HDL5622945.1"
                     /translation="MKKLLLASAIAFATLSANAQETITFAMEPSYAPFETTNEKGEVI
                     GFDVDIAKALCEELKATCEFKTQSFDSLIAGLKFKNFDAIISGMDITEARQKQVAFTN
                     AYLENSVSYVAMKGKFTPETAKNVGVQNGTTFQQYLSKNAKQYNLKPYASLQSAVLDL
                     KNGRVDMVFGDTPVLAEWLKTEKELDFVGEKVVDKAFFGNGYGIAVNKSNTALLEKLN
                     SALATIKTNGKYEQIYNTWMAGK"
     gene            complement(8767..9501)
                     /gene="artP"
                     /locus_tag="PXE50_002074"
     CDS             complement(8767..9501)
                     /gene="artP"
                     /locus_tag="PXE50_002074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter ATP-binding protein
                     ArtP"
                     /protein_id="HDL5622946.1"
                     /translation="MAIRIQNVNFFYGSNQALFDINLEIEKGDTVVLLGPSGAGKSTL
                     IRTLNLMEVPQSGTLAIANHQFDLTAKTDSKAVSLLRREVGMVFQQYHLWPHLTVMQN
                     LIEAPMKVLGLSKEEAVARAKGHLARLRLSEFAERFPLHLSGGQQQRVAIARALMMQP
                     QVLLFDEPTAALDPEITAQVVDIIKELQSTGITQVIVTHEVGVARKVASKVVYMEKGT
                     IIEQGDASCFESPKTEQFAQYLSHSE"
BASE COUNT         2945 a         1985 c         1802 g         2786 t
ORIGIN      
        1 tcaacaaaac aaatatgact caattatcaa taaagctaaa aatcagaaca gccaagagaa
       61 taatttaacc gaaataaaca gcaacataca aatattagct gaaaaacacc aactaaccat
      121 tgaaagttta caatggaatt tagaacaagg taaaagtatt gaattgagta ttatcggcaa
      181 tagccgatct ttatttgatt ttatccattc agttaagcaa ataccttatt tgaaatacaa
      241 tgcgattagc ctcatcaaat ctcggcaaga cagaaaagtt gaaatgaata ctaccttagt
      301 catattagct aataaggaat aacaatgcgt aattggtttt tatttattac tttatttatc
      361 agtttttctg taaaagcaaa tgatcctttc tttggagaaa aacaggaaac tcaagcctca
      421 ggcaacatcg ctgaaagcaa tgtggaattt gcaaaaaata ctgaaaacat caccgcttgt
      481 aaagtacctg ataacctttc tgcaaaaaat atagtaactg attttgacaa aatgacactg
      541 ataggattag ttaaaatcaa tgaagtaatg cgtgcattat ttattgatga aaaacaacaa
      601 ttacttgctc taaaagaaaa tgacttgctt aacaatgaaa ttgaaataaa acatattaat
      661 cttaaatcca ttacttatat taactggaaa ttaactaaag attgtaatat cccttatgaa
      721 attaacatca aattatagag gttgatatgt ggcgaatttt tatatatttc ttatgcggtt
      781 tttcattagc ctatgcgaat accatttcca tagttttaaa aaatgctcca acttcgctta
      841 tttttactta tttagcggaa gaaaccggta aaaatatggt gcttgatgat aatattgaaa
      901 ccaaatcaac actacgatta gaaaataaat cggttgacga gatttttaaa acgcttggca
      961 aagtcaataa attatcctta acgcaagaag atgatattgt ttatattcac aaaaaagagg
     1021 aaaaagcggc tgacttaacg cctctgccaa taatgaattt gcaaaataat gggcaaaata
     1081 caccgcttgt caccgcccct aagttaatca caaaaacctt gaaactacat tatgcaaagg
     1141 cttcagaggt gattgagtcg ttaaccaaag gcagcggaac gtttttatcg gaaaacggtt
     1201 atattcactt tgatgaaaga agcaatagcc tgattgtgaa agacagtgca aaatcgctta
     1261 aaaatatcga gaatttagta aaacagctcg accaacccac cgagcaaatt gcgattgagg
     1321 ctagaattgt cactatcagt agcgagcatt tgcaagagct tggcgttcgc tggggaattt
     1381 tttctcgtgg ggctgggcac tataaatttg gcggacggct ggaaggcaat ggactcaaca
     1441 atgtcaccaa taacttaaat gtaaattttc cgattactgg tggagcatct gccgtattac
     1501 aggtttcgtc cattaatagc agagtgcttg atttagaatt aagtgcatta gaacaagaaa
     1561 atagtgtgga aattattgcc agcccacgcc tgttaaccac caataaaaag ccggcaagta
     1621 tcaagcaagg cacggaaatt ccttatgtga tgtacaacac caaatcggaa gccaccgatg
     1681 tcgaatttaa agaagcggta ttagggcttg aagtcgttcc acacctttca acccaaaatc
     1741 aaattctact cgatctgatc gttacccaaa attcgccaaa ttcccaatcc ggcagtagtg
     1801 gcttaattac gattgataaa caagagctaa atacgcaagt atttgccaaa cacggcgaaa
     1861 ccattgtact tggtggtatt tttcaacatt taacccaaaa aggcgaagat aaagtgccga
     1921 ttttaggctc aattcccttc atcaagcggt tatttagtca aactcgagat aaaatcagca
     1981 aaagagagct agtcattttt gtgacgcctt atatccttca atctaatgaa aagagcagca
     2041 accgcaaaaa atcaaaatag cacatcataa acgcaagcaa aaatagggga agtgtgatag
     2101 aatcagccgt cattttttga gttaaagatt tagaggtttt atgaaaattt ccccacgtcg
     2161 ccgtgcaaga gaatgtgcgg tgcaagccat ttattcttgg tatatttccc aaaacacggt
     2221 tgaagaagtg gaattggcgt ttgtgaccga tcaagatatg aaaggcgttg atatgcctta
     2281 tttccgtaaa cttttccgtg gcgttgtgga taatgtagaa gccattgatg aagcattacg
     2341 cccttattta gatcgtaaag agtcagatgt tgatcctatt gaacgttcta ttttgcgttt
     2401 atcaacttac gaattaaaat ttgaacacga tgtgcctttc cgtgtagtca tcaatgaagg
     2461 gattgaagtc gctaaagtgt tcggctctga tgacagccac aaatacatta acggcatttt
     2521 agataaatta gccccagcat taggcagaaa ataataagat tccccaattt atacataaat
     2581 tggggatttt gattataacg ctcaaggaga ttttttatgg gtgaatttga tattatcgaa
     2641 cgctatttta atgcttctca acgcccacct cgcaaagatg ttttactttc tatcggcgat
     2701 gactgtgcgc tcacatcact caaaccaaat cagcaacttg cgatcacaac cgataccctt
     2761 gtttgcggca ctcattttct accgactatt tcacctgccg atctcgctta taaaagtgtg
     2821 gcgtccaatt taagcgatct tgccgcaatg ggtgcagaac ctgcatggat ctctttagcc
     2881 ttaaccttac ctgaaattaa tcacgattgg ctagctgaat ttagtgaaca tttctttgag
     2941 attcttgatc actataatgt tgatttgatt ggaggggata ctacttgtgg accactatct
     3001 ttgacaatca cagctcaagg gattgtgcca caagatagag gcttattccg ccataatgct
     3061 aaagtaggcg attggatcta tgtttccggc acactcggtg acagtgcagg tggtttgcaa
     3121 cttctgctaa atcagcaaag cgagcaagtg aattggaata aagagcaaag ctacctgatt
     3181 caacgccatt tacgcccaac acctcgagtt ttacttggct tgactatcgc ctctattgct
     3241 aatgcagcga ttgatatttc agatggtcta ttgtctgatt taagccatat tttaaagcgc
     3301 agtgactgtg gtgcagtatt aaaccttgag aatttcccct tgtctgacgt cttacttagt
     3361 tgttattctc gaacagaggc agaatatttt gccttaaacg gtggcgaaga ttacgaactc
     3421 tgctttaccg tgccaaatga caacaaagcc aaattagaca aagcattagc caatatcgga
     3481 gtaacttata catgtattgg gcaaattcgt tcggctaaag aaggtttaac cctattacgt
     3541 cataatcagc ctgtcacctt gccctcacaa cgaggctacg atcattttaa aaaataacgc
     3601 aatgaaacca attaatctta aaaatccgat tcattttttt gcctttggct ttggttcagg
     3661 cttattaaag cctgctcccg gcacctgggg tagcctcgcc gggctaattg tagcaatagc
     3721 cttgtggtct atcacacaat ccgccctgtt tttcggctta ctcaccctag tttcttttat
     3781 tgccggttgt gttatttgca ccaaagccag ccaagatcta gaagtacacg atgacgggcg
     3841 aattgtttgg gacgaaatag ttgccatctt tttgatgttc acctgtttgc ctgaatacaa
     3901 tcttcttggc tacctgctcg cctttatcag ctttcgcatt tttgatattt tgaagccttt
     3961 tccaatccgc tattttgatg aaaaattaga aagcggttta ggcattatgt ttgatgatat
     4021 tctcgcagcc atttttgccc tgatttcact tcatctttta tattatttca tttaaaaatt
     4081 tatgctcact attttattta ttcattttgc cgggcttatc agccccggcc ccgatttctt
     4141 ctatgtcgtc agacaatccg ccagccactc agttaaaagt ggggtacttg ccgcaaccgg
     4201 aatctcaatc ggcattattt tttgggcagc ctttgcgatt tttggtttag cgtggctcag
     4261 taatagtatt ggctcgctgt ttcaatatgc cattatgatt atcggtggct gttacctggt
     4321 ttatattggc tctcaaatgg tacgggtaac cgaaaatatc atttttgttg aaaataaagc
     4381 tcaactcacg ccgctaaacc cttggcagga aattaaaaaa ggcttattaa tcaatatctt
     4441 taatgccaaa gctggcgttt actttaccag cgtcatttca gcctatgtag ataatttaag
     4501 caatacccta caaatgttcg aactacttct actctttgtg gtaagtacct ttatttattt
     4561 ctgtgtggtg gcactactct tttctcgccg accggtcaga ctgttctatg ccaaatatag
     4621 tcgctatatt gacaatatct caggcgtaat tttcatctta ttcggctcga tgctgattta
     4681 tgaaggattc agccacttta tctaatcaca agcggtctga tttcactaaa aatttgcaaa
     4741 ttccgctatc aataaatagt gttattttat acagtttctg ctatgctact gccaatttta
     4801 actctgagag aacaaaatga ttggacgatt acacggcaaa attattgaaa agcaaccgcc
     4861 tgaaatttta ttagacgtgc aaggggtagg ctatgaacta ctgctcccga tgaccagttt
     4921 ctacagcctg ccacaaattg gcgaagaggc gactattttc acccatttag tggtgcgaga
     4981 agatgctcac ttgctattcg gctttgccca aaaacaagat agaactctat tccgtgaatt
     5041 aattaaaacc aacggtgtcg ggccgaagct cgcgttggca attctatcag caatgtcggt
     5101 gtcgcaattt gccaccgcga ttgaaaatga agagctggca aaattaacca aaattccggg
     5161 aatcggtcgg aaaaccgcag aacgcttatt ggtggaactc aaaggcaaat ttaaaggaat
     5221 ggcacagagt gatttctttg tggaagtatc gcacgagcaa attgtggcaa gtaatacgcc
     5281 agacccggca aatgaagccc ttgatgcctt aatagcccta ggctacaaac ctgccgatgc
     5341 ggaaaaaatg attaagaaag tgaataaatc cggtgcaacg agcgaacagc ttattcgtga
     5401 ggcgttaaaa aattcattat gatattgata gtatagggcg aaagatattt cgcccctaca
     5461 atctcatttt taaaaatata tgtgtagggg caaatcaata tttgccctca tgagtaatat
     5521 agggtaatac cattccacta caacaataat ctaaatgtat gattgaagca gatagaatca
     5581 tcagtgcctc gcctaagcgt gaggaagaag ttatagaccg agcaatccgc ccgaaactgc
     5641 ttgccgacta tgtcgggcag ccttctgtgc atgatcaaat ggagatcttc atcaaagccg
     5701 ctaaattgcg ggaagaggca ttagatcact tgctcatttt cggcccgccc ggtttgggga
     5761 aaactaccct tgccaacatt gtggcaaacg aaatgggggt gaatattcgc acaacttcag
     5821 ggccggtgct ggaaaaagca ggcgatttgg cagcaatgct gaccaacctt gaaccttacg
     5881 atgtgctgtt tattgatgag attcaccgcc tttctccagc gattgaagaa gtgctttatc
     5941 ctgcaatgga agattaccag ctcgatatta tgattgggga aggacctgct gctcgttcca
     6001 tcaagctcga tctaccgcct tttacccttg taggggcaac cacccgtgcc ggctcactga
     6061 cctcaccgtt acgagatcgt tttgggattg tacaacgctt agaattttac tcagtggacg
     6121 atcttactct gattgtcaaa cgcagcgccg attgcttaaa tctcaatttg tcggcagacg
     6181 gtgcttatga agtggctcgc cgctcccgtg gcacaccccg tattgccaac cgcttactcc
     6241 gccgagttcg ggattacgcc gatgtgcgta ataatggcat tattacctca gacattgcca
     6301 aacaagctct ggcaatgctc gatgtggatt cggaaggctt tgattttatg gacattaaac
     6361 tgttgcaagc gattgtagaa cgctttgatg gcgggccagt tggattagac aatcttgcgg
     6421 cagctatcgg cgaagaacga gatacgattg aagatgtgct agagccttat ctgattcagc
     6481 aaggctttct acaacgcaca ccaagaggca gaattgctac cagcagaacc tatgcccatt
     6541 taggtataac ccaaatagat tagtcatatt tctaaaggca ttgatacata aataaaaagc
     6601 ggatagttag tactatccgc tttcatttgc aaaaaatcaa taaaatttga ccgcttatcc
     6661 gctaggcttt ttcagtctca aaacgctcaa aagctaatac tctgctttct aattttctga
     6721 gaacgattgt cataatgccg gtaattacca agtaaataac ccctgccata ccataaattg
     6781 ataatgcgtc atactctgta ccataaagct ggcgagcata gcccataata tccataatcg
     6841 taatggttga agcaagcgat gtgcctttaa aaactagcac aatctcatta ctataagaag
     6901 gtaaagcacg ttttaatgcg taaggcacta aaattttcag tgtatctaaa cggctcaaac
     6961 caagggctgc gcaagtttcc cattgcccct tcggaatcgc ttttaccgca ccgtggaaca
     7021 acaatgtcga ataggcagca ctgtttaacg ctaaagccaa cattgcacag aaccaagcgt
     7081 cggataataa tacccaagcc gcactttctg taatccattc aaattgcccc gggccactat
     7141 aaatcaagaa aaattgaatt aataaaggcg ttccggtaaa aagcgtaata aatccgttta
     7201 ccaaccactt taacggacga ttttctaacg agagaataaa cgtaagaatg atcgctaaaa
     7261 taaaggcaat gatgagcgcc acaaaagtga gctgtaggct ggtgccaata ccctgtgaaa
     7321 tttcaactaa ataatcccac cacattaagc aactcctcgc tcaaaacggg taaatctacc
     7381 ttctaatact ttaatcactc gctggctaat tagagtaatc gctaaataaa taagtgctgc
     7441 tatcccatac caagtaaaag gttgatgagt attagcatta attaactccg attgacgcat
     7501 taaatcatct accccaatta acgataccaa tgccgtatct tttaacagca ctaaccactg
     7561 attgcttaag cctggtaaag cgtgtcgcca gacttgaggg agaataatgc gaacaaatac
     7621 ttgcgctcgg cttaacccta acgccgtacc agattcccac tgcccaactg gaatagcttt
     7681 aattgcacca cgtaaagatt gggaagcata agcagcaaaa ataataccca gcgcaatagc
     7741 cccacaccag aaagcattta actccgcaaa ctcatcggtg atcaagaaaa taacttggat
     7801 aagaccaaaa tagatcaaaa ataccactaa aatctccggc aacccacgca ataatgtaat
     7861 tattatacta gttggtttac ggatacatgc aatcttactg gtttcaagta ccacaaaaaa
     7921 gattgacaat aacattccaa tcaagaggct tgccagcgca atccctaagg tcatcagggt
     7981 tgcgttgaca agtaagttta aaatatcgct agacattatt tcccagccat ccaagtatta
     8041 taaatttgct catatttacc atttgttttg atggtagcta aagccgaatt taatttttca
     8101 agcaatgcag tgttagattt atttaccgca ataccatatc cattaccaaa aaaggcttta
     8161 tcgactactt tttcacccac gaaatctaac tctttttcgg tttttagcca ctctgccaat
     8221 actggtgtat caccaaatac catatcaaca cgtccatttt ttaaatctaa cactgctgat
     8281 tgtaggctag cgtaaggttt taaattatat tgtttggcat ttttgcttaa gtattgttga
     8341 aaagttgtac cattttgcac gccgacattc ttagctgttt ccggtgtaaa tttccccttc
     8401 attgcgacat aacttactga gttttctaaa taagcattgg taaaggcaac ctgtttttga
     8461 cgcgcttcag taatatccat gcctgaaata attgcatcaa aatttttaaa ttttaatccc
     8521 gcaattaagc tatcgaatga ttgcgtttta aattcgcaag ttgcttttag ttcttcacat
     8581 aatgcttttg caatatctac atcaaagcca ataacttcac ctttttcatt tgttgtttca
     8641 aaaggggcgt aagaaggctc catcgcaaaa gtgatagttt cttgtgcatt ggcagaaagc
     8701 gttgcaaatg cgatagcgga agctaataat aattttttca ttgttgtgtc cttttgttgt
     8761 tatagattac tctgagtgag ataaatattg agcaaattgc tctgttttcg gtgattcaaa
     8821 acaacttgca tcaccttgtt caataattgt acctttttcc atgtacacca ctttgcttgc
     8881 caccttacga gcaacgccta cttcgtgagt cacaatcacc tgagtaatgc ctgtagattg
     8941 caattcttta ataatatcaa ctacttgtgc agtaatttcc gggtcaagtg ctgcggtagg
     9001 ttcatcaaat aataagacct gtggctgcat catcagtgct ctggcaatcg ccacccgttg
     9061 ttgctgacca cctgaaagat gcagtgggaa acgctcggca aactcgctca aacgcaaacg
     9121 tgccaaatgt ccttttgctc tggcaaccgc ttcttctttg cttaacccaa gcactttcat
     9181 cggggcttca attaagtttt gcattacggt taaatgcggc cataaatgat actgctggaa
     9241 caccattccc acctcacggc gtaacaaact caccgctttg ctgtcggttt tagcagttaa
     9301 atcaaattga tgatttgcaa tcgccaaagt gcctgattgc ggtacttcca ttaagtttaa
     9361 ggttcgaatt agggtacttt tacctgcccc actcgggcca agcaatacaa cagtatcccc
     9421 tttttcaatc tctaagttaa tgtcaaataa ggcttggttt gagccataaa aaaaattgac
     9481 attttgaata cgaattgcca ttcgttaaaa tcctacta
//
LOCUS       DANLZQ010000097         9397 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.097, whole genome shotgun sequence.
ACCESSION   DANLZQ010000097 DANLZQ010000000
VERSION     DANLZQ010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9397)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9397)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9397
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.097"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..255
                     /locus_tag="PXE50_002075"
     CDS             <1..255
                     /locus_tag="PXE50_002075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622947.1"
                     /translation="NSLIQASDVIAGLLAGIGEQIQKYNEQEFYNEFISKLNPNHLEN
                     LKLLAQIYQNSIYKSNGLFTHFFAPLSFICRLQNFIFSYK"
     gene            358..1371
                     /gene="cas1c"
                     /locus_tag="PXE50_002076"
     CDS             358..1371
                     /gene="cas1c"
                     /locus_tag="PXE50_002076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003762781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-C CRISPR-associated endonuclease Cas1"
                     /protein_id="HDL5622948.1"
                     /translation="MRKLQNTLYITTQGSYLHKERETLVVEQDRKKVAQLPIHSIGHI
                     FCFGNVLVSPFLMGFCGENNVNLAFFTENGRYLGRLQGRQSGNVLLRRAQYKKSETNP
                     VPVARNIIAAKIQASKRVLQRQIRNHGENADLQSTITALNYSLQQLKTADNLDLIRGI
                     EGDAAARYFGVFSHLIKENSGFHFDGRNRRPPRDGVNALLSFLYSIVGKDISGALQGV
                     GLDPQIGFLHADRSGRDSLAQDILEEFRAWWVDRMVLSLINRGQVKPDDFVTEASGAV
                     TLKPEARKLLFQTLQAKKQEKIIHPFLEEEVEIGLLPYIQAMLLARHLRGDLAEYPPF
                     LMR"
     gene            1438..1731
                     /gene="cas2"
                     /locus_tag="PXE50_002077"
     CDS             1438..1731
                     /gene="cas2"
                     /locus_tag="PXE50_002077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005540845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated endonuclease Cas2"
                     /protein_id="HDL5622949.1"
                     /translation="MLMLITYDISFDDPEGQARLRRIAKHCLDYGVRAQYSVFECDVT
                     PAQWVTLKNKLLATYNPDCDSLRFYHLGSKWRNKVEHHGAKPSVDIFKDTLIL"
     repeat_region   1923..3025
                     /inference="COORDINATES: alignment:crt:1.2"
                     /inference="COORDINATES: alignment:pilercr:v1.02"
                     /rpt_family="CRISPR"
                     /rpt_type=direct
                     /rpt_unit_range=1923..1942
                     /rpt_unit_seq="cagccacctacgcgtggctg"
     gene            3275..4750
                     /gene="rng"
                     /locus_tag="PXE50_002078"
     CDS             3275..4750
                     /gene="rng"
                     /locus_tag="PXE50_002078"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005610087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HDL5622950.1"
                     /translation="MSSTELLVNVTPSETRVALVENGILKELHIEREAKRGIVGNIYK
                     GRVTRVLPGMQSAFVDIGLEKAAFLHASDIVSHTECVDENEKKQFLVKDISELVREGQ
                     DIVVQVVKDPIGTKGARLTTDITLPSRYLVFMPENSHVGVSQRIESEEERARLKSLVE
                     PYCDELGGFIVRTAAEEATEESLKQDVEFLKRLWRKVLERKGKYSAKSMLYGELALAQ
                     RVLRDFIGTHINSVRIDSKLTYEQVREFLAEFMPELTDCVTLYTGQQTLFDAYGVEKA
                     IQKALDKRVDLKSGGYLIIEQTEAMTTIDINTGAFVGHRNLAHTIFNTNIEAIQAIAH
                     QLQLRNLGGIIIIDFIDMQEEEHRERVLQSLQEALKGDRVKTNVNGFTQLGLVEMTRK
                     RTRESLERILCCDCQACQGRGTVKTVETVCYEIMREIVRVHHLFKTENIHVYAAKDVA
                     EYLINEESHALLAELQAFIGKKIEIKLEPYYHQEQFDVVVM"
     gene            4904..6406
                     /gene="lysS"
                     /locus_tag="PXE50_002079"
     CDS             4904..6406
                     /gene="lysS"
                     /locus_tag="PXE50_002079"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012054447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HDL5622951.1"
                     /translation="MSEVENQELDLNGEMLARREKLNKIREQGNAFPNTFRRDALAKD
                     LHAQYDAVEGETLKEQNIQVKVAGRIMLKRVMGKASFFTIQDVSGAIQLYVARDNLSD
                     SVYEEKVSLWDLGDIVGVEGALFKTKTGELTVRCSEVQLLTKSLRPLPDKHHGLTDLE
                     TRYRQRYLDLISNEESRRTFMIRSQVVSGIRKFFLERDFIEVETPMLQVIPGGAAAKP
                     FITHHNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNPEFTMIEY
                     YQAYADYHDLMDNTEELLRQLALDILGTTDVPYGDYVFDFGKPFERITMHDAIVKYGN
                     GIQREDLDSFEKSVEIAKGLGIEIQKSWGLGSVVNAIFEEVAEHQLIQPTFLMAHPAE
                     ISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAERFDAQVAAKDAGDDEA
                     MFKDEDFIVALEHGLPPTAGEGLGIDRLVMIFANAPSIRDVILFPAMRQK"
     gene            complement(6484..7557)
                     /locus_tag="PXE50_002080"
     CDS             complement(6484..7557)
                     /locus_tag="PXE50_002080"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HDL5622952.1"
                     /translation="MAQQITLFEDVPLPLTLGGELSPITVAYQTYGRLNAEKSNAVLL
                     CHALTGDAKPYYDSPTEKGWWQDFIGKGLAFDTDKYFFICSNVLGGCKGTTGPASINP
                     KTNKPYGSLFPIITVQDIVNVQKALLDYLEIPQLHAVVGGSFGGMQATQWGISYPDKV
                     RNIINLCSSLTLSAEAIGFNHVMRQAIINDPHFNGGNYYDGIAPDNGLKIARMLGMLT
                     YRTDIQLAKAFGRETKQQGQIWGDHFQVESYLSYQGTKFLGRFDANTYLRLLRALDLY
                     DPALGYENEETALKRIKANYTFVAVTSDQLFKQVDVYKSKQKLEQAGVNLEFHEFHSD
                     FGHDAFLVDYDFFEPMIKAGLAK"
     gene            7825..8508
                     /locus_tag="PXE50_002081"
     CDS             7825..8508
                     /locus_tag="PXE50_002081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HDL5622953.1"
                     /translation="MNQTRDRLEKLPLFHKMQQFIIKALKIIAIFPLLGIAILLVVDS
                     LTSYIVRDKIYTDSKQIPYREYAVVLGTAKFYSKDVINQYYKYRLEAAKQLVQEGKVN
                     QLLLSGDNKTPYYNEPKTMTSDLLKMGIATSKIKQDYAGYTTFYSIIRAKKVYKLPPF
                     TIISQKFHCERALFIAKFRDIDAICYAATYPEGAYQVRMREILARSAMVFSLLIGKEP
                     ESLEDIRSK"
     gene            complement(8545..9384)
                     /gene="purU"
                     /locus_tag="PXE50_002082"
     CDS             complement(8545..9384)
                     /gene="purU"
                     /locus_tag="PXE50_002082"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HDL5622954.1"
                     /translation="MLQQHKILLTECPDDTGLVAKITNICYKHQLNIIKNSEFVENET
                     KRFFMRTELNGIFNDETLLTDLKFTLPEGSSYKLLPKQRKRIVILVTKEAHCLGDLLM
                     KNYYGGLDVEIAAVIGNHETLKSLVERFDIPFHLVSHENLTRVEHDKLLAEKIDEYSP
                     DYIVLAKYMRVLNPEFVARYPNRVVNIHHSFLPAFIGAKPYHRAYERGVKIIGATAHF
                     VNDELDEGPIIMQNVINVDHTYTAEAMMRAGRDVEKTVLSQALELVLADKVFVYKNKT
                     IIL"
BASE COUNT         2835 a         1683 c         2049 g         2830 t
ORIGIN      
        1 aatagcttaa ttcaagctag tgatgtaatt gcagggctat tagctggaat tggagaacaa
       61 attcagaaat ataatgagca agagttttat aacgaattta tatctaaact gaatcctaat
      121 catttggaaa atctaaagtt gcttgctcag atttatcaga attctatata taaaagcaat
      181 ggattattta ctcatttttt tgcaccttta agttttattt gtagattgca aaattttata
      241 ttttcctata aataaaaata ggtaagtagt gttataagaa aaattcttac atcaaaaatc
      301 agaaaaatat atttaaataa ttatgatgtg agattaaagt taaagggatt ttcaaccatg
      361 cgcaaactac aaaacaccct ctacattacc acccaaggta gctatttgca caaagagcga
      421 gaaaccttgg tggtggagca agatcggaag aaagtggcac agttgccgat tcattccatt
      481 gggcatattt tttgttttgg caatgtgtta gtgtcgccgt ttttaatggg attttgtggc
      541 gaaaataacg taaatttagc gttttttacc gaaaatgggc gttatcttgg gcggttgcag
      601 gggcggcaaa gtggtaatgt attgttacgc cgagcccagt ataaaaagtc ggagaccaac
      661 cctgttcctg tggctcgcaa catcattgca gccaaaattc aagcatctaa gcgggtgtta
      721 caacggcaaa ttcgtaatca cggcgaaaat gctgaccttc aatcgacaat taccgcatta
      781 aattacagcc tgcaacagtt gaaaacagca gacaatttgg atttgattcg tggcattgag
      841 ggcgatgctg cggctcgtta ttttggggtg ttttctcatc ttatcaaaga aaatagcggt
      901 ttccactttg acggacgtaa tcgccgccca cctcgtgacg gtgtgaatgc gttgctttca
      961 tttctttata gcattgtagg gaaagatatt agcggggcat tgcaaggcgt ggggcttgat
     1021 ccccagattg gctttttgca tgcagatcgt tcggggcgag atagcttagc tcaagatatt
     1081 ttggaggaat ttcgagcgtg gtgggtggac agaatggtgc tgtcgctgat caatcgaggg
     1141 caggttaagc ctgatgattt tgtgacggaa gccagtggtg cggtaacgct caagcctgaa
     1201 gccagaaaat tactatttca aaccttgcaa gcgaaaaaac aagaaaaaat catccaccca
     1261 tttttagagg aagaagtgga aatcggcttg ttaccttata tccaagcgat gttattggct
     1321 cgtcatttgc gtggcgattt ggcagaatat ccgccgtttt taatgcgtta aaatctgcaa
     1381 aattttgttg aaatttgacc gcttgtttat gttttattca ttgaggaatt agcaactatg
     1441 ctgatgttga ttacctacga catttcattt gatgaccccg aagggcaggc tcgcctacgc
     1501 cgtattgcta agcattgttt ggattatggt gtgcgggcgc aatattctgt gtttgagtgt
     1561 gatgttactc ctgctcagtg ggtaacattg aaaaataaat tattggcaac ttacaaccca
     1621 gactgtgata gtttgcgctt ttaccattta ggcagtaaat ggaggaataa agttgagcac
     1681 catggcgcaa aaccttcagt ggatattttt aaagatacgc tgattttata aatcgctagc
     1741 ctgtagttct cataaaaatg tagcaaggtt agcgaatcta tattgttctt taataatcaa
     1801 ggaattagaa aaaataaggc acaatatatt ggcgatatgc tatactttat ccactctcta
     1861 caaaacgtta gcgaataaag ggctaaaaag cctgatattt caatacgtta tcttataggg
     1921 accagccacc tacgcgtggc tgcgaattga aaccctataa cgagcaatgg cattttgatc
     1981 tacggtaaac cagccaccta cgcgtggctg cgaattgaaa cttcttgaat acctccggag
     2041 tcagttaaga taaggccagc cacctacgcg tggctgcgaa ttgaaacctt tttcaagaat
     2101 caagattaag agatccaaac aaccagccac ctacgcgtgg ctgcgaattg aaaccaccgc
     2161 tgctacttcg gttatcggag tagtttgcac ccagccacct acgcgtggct gcgaattgaa
     2221 acgtggcaca gtaacacgag cagatgctga taaacgccca gccacctacg cgtggctgcg
     2281 aattgaaacc agcagccgtt gttaccgtgg tgcaatgctt gcgccagcca cctacgcgtg
     2341 gctgcgaatt gaaactacac ttattgccat agggtagtag taatctttta cccagccacc
     2401 tacgcgtggc tgcgaattga aactgcgatt tttggatttt tcgggcgata aatgatacca
     2461 gccacctacg cgtggctgtg aattgaaact cgtggctggt tatacaaaga aaagcattgt
     2521 tgggcagcca cctacgcgtg gctgtgaatt gaaacttaaa tctaaagcta aagctatttt
     2581 attaattaaa gcagccacct acgcgtggct gtgaattgaa actttaccgt ttaccgattg
     2641 gattttaatg ctagaggcag ccacctacgc gtggctgtga attgaaaccc taaattgccg
     2701 taaaaatctg ccattagcta cgcgcagcca cctacgcgtg gctgtgaatt gaaacctcat
     2761 aacgaatcca atcctgttcg gttaatcccc gcagccacct acgcgtggct gtgaattgaa
     2821 acaggggcgt gtaccgcaat caattttaat tataaccaag cagccaccta cgcgtggctg
     2881 tgaattgaaa ctttatctgt tgcggtcaat tgtatatctt gaatttgcag ccacctacgc
     2941 gtggctgtga attgaaacct cgtcttgaat tggaaaatca agggcgacaa taggcagcca
     3001 ccttcgcgtg gctgtgtatt gaaacggtgt acccacaaat cctatgtttt cgccattggc
     3061 tgctaccttc gcatcaatat atattgaaat atcaatggca aatttgtatg ttgttaatta
     3121 gactgattgc atctgctatg tatcatagta atgacgaaaa tattctattt tgcaaaaaat
     3181 aatcagaaat tacccgcttg ttcgaactga gtttttgttt tctaagatgt gaaatgatac
     3241 actttagata gttttaaaat atagagacag taagatgagt agtacggaat tattagtgaa
     3301 tgttacccca agcgaaacaa gggtagcgtt ggtagaaaac ggaatattga aagaattaca
     3361 tattgagcgg gaagctaaac gcgggattgt tggtaatatt tataagggaa gggtgacaag
     3421 ggtattacca ggtatgcaat ctgcttttgt ggatatcggc ttggagaagg ctgctttttt
     3481 gcacgcttct gacatcgttt cgcatacgga atgtgttgat gaaaatgaaa agaagcaatt
     3541 tctggttaaa gatatttctg aattggtgcg tgaagggcaa gatatagttg tacaagtagt
     3601 gaaagatcca attggtacta aaggagctag gctcactact gatattacgt taccatctcg
     3661 ttatttagtg tttatgccag aaaatagcca tgtgggagta tctcagcgga ttgaaagtga
     3721 agaagagcgt gctcgtttaa aaagcttggt tgagccttat tgtgatgaac ttgggggctt
     3781 tattgtacgt accgctgcag aagaggcaac tgaagaaagt ttaaagcaag atgttgaatt
     3841 tttaaaacgg ttgtggcgta aagtattaga acgaaaaggg aaatattccg caaaatcaat
     3901 gctttatgga gagcttgcgc ttgctcaaag ggtactgcgt gattttattg gtacacatat
     3961 caattcggtt agaatcgatt caaagctaac ttatgagcaa gtgcgagaat ttttagctga
     4021 gtttatgcca gaattaacgg attgtgtcac cctctatacc ggtcagcaaa ctttatttga
     4081 tgcctatggt gtagaaaagg caatccaaaa ggcattggat aaacgggttg atttaaaatc
     4141 ggggggctat ttaattattg agcaaactga ggcgatgacg actattgata ttaatactgg
     4201 tgcttttgtc ggacatcgta accttgcaca tacgattttc aacacaaata ttgaagcaat
     4261 acaggcaatt gcacaccagc tacagttgcg taatttaggt ggtattatca ttattgattt
     4321 tattgatatg caagaggaag aacatcgtga gcgcgtttta caatcgttac aagaggcatt
     4381 aaaaggcgat cgtgttaaaa ccaatgtgaa tggctttact cagcttggct tggtggagat
     4441 gaccagaaaa cgtacaaggg agagtctaga gcgaattctt tgttgcgatt gccaagcttg
     4501 ccaagggcgt ggcacagtga aaactgtaga gacggtttgc tatgaaatta tgcgtgaaat
     4561 tgtgcgtgta catcatttgt ttaagacaga aaatattcac gtttatgcag ctaaagatgt
     4621 tgctgaatat ttaattaacg aggaaagcca cgcattattg gctgagcttc aggcgtttat
     4681 cggtaaaaaa attgagatta aacttgagcc atattatcat caagagcagt ttgatgtggt
     4741 cgtgatgtaa tctattactt ggttgaggct aaatagttag cctcaatatc gttagttaca
     4801 aaaaatttag aaaatctgac cgcttgtttc ctatccaaat tcctcaaaat aacgtataat
     4861 cgtccagttt tatttatcct tttttgaaat ctaaggtaat tcaatgtctg aagtagaaaa
     4921 tcaagaatta gatctaaacg gtgaaatgtt agcccgccgt gaaaaattaa acaaaatccg
     4981 tgagcagggt aacgcatttc caaatacatt ccgtcgtgat gcgttagcca aagatctgca
     5041 cgctcaatat gatgcagtgg aaggtgaaac cttaaaagaa cagaatattc aagtgaaagt
     5101 tgccggtcgt attatgttaa aacgagtaat gggtaaggca tctttcttta ccattcaaga
     5161 tgtgagcggt gcgattcagc tttatgtagc tcgtgataac ttaagtgaca gcgtttacga
     5221 agaaaaagtc agcctttggg atttaggcga cattgtgggc gtcgaaggtg cgttatttaa
     5281 aaccaaaacc ggtgaattaa cggttcgttg ctctgaagtt caacttttaa ccaagtcttt
     5341 acgcccgttg ccggataaac atcacggttt aacggattta gaaactcgtt atcgtcagcg
     5401 ttatttagac ttgatttcta atgaagaatc tcgccgtact tttatgatcc gctcgcaagt
     5461 agtttcaggc attcgcaaat tcttcttaga aagagacttt attgaagttg aaacgccaat
     5521 gttgcaagtg atcccgggcg gtgcggcagc gaaaccgttt atcactcatc ataatgcgtt
     5581 agatgtggat atgtatctgc gtattgctcc agagctttac ttaaaacgtt tagttgtggg
     5641 tggttttgag cgagtatttg agcttaaccg taacttccgt aacgaagggg tttcagtacg
     5701 ccacaatcct gaatttacaa tgattgagta ctaccaagcc tatgcggatt atcacgattt
     5761 aatggataat accgaagaac tgttacgcca attagcctta gatattcttg gcacaactga
     5821 cgtaccttat ggtgattatg tattcgattt cggtaaaccg tttgagcgta ttacgatgca
     5881 cgatgcgatt gtgaaatatg gtaacggcat tcaacgtgaa gatttagaca gcttcgagaa
     5941 aagtgtggaa attgcgaaag gcttaggcat tgaaattcaa aaatcttggg gtttaggctc
     6001 ggtagtcaat gcgatttttg aagaagtggc agaacatcaa ttaattcagc caactttctt
     6061 gatggctcac ccggcagaaa tttcaccatt agctcgccgt aatgatgaaa acccagaggt
     6121 aactgatcgt tttgagttat ttatcggtgg tcgtgaaatt ggtaatggtt tctcagaatt
     6181 aaacgatgca gaagaccaag cagagcgttt tgatgctcaa gttgcggcga aagatgccgg
     6241 tgatgatgaa gcaatgttta aagatgaaga ctttatcgtg gcattggaac acggtctgcc
     6301 gccaacagcg ggtgaaggtt taggaattga ccgcttagta atgattttcg ctaacgcccc
     6361 atcaatccgt gatgtaattt tattcccagc gatgcgtcag aagtaatcag aaatagaaca
     6421 aaagcacact tcggtgtgct tttttgtatt acaagcggtc aaatttttaa taaaaaatgc
     6481 aatttatttt gctaatccgg ctttaatcat cggttcaaaa aagtcataat caaccaaaaa
     6541 ggcatcgtgt ccgaaatcgg agtgaaactc gtggaactcc aaatttacgc ctgcctgttc
     6601 taatttttgt ttgctcttat acacgtcaac ttgcttgaat agttggtcgc ttgttaccgc
     6661 tacaaaagtg tagttggctt taatacgttt tagggcggtt tcttcatttt catagccaag
     6721 agccgggtcg tataaatcta atgctcggag taaacggagg taagtgttgg catcgaaacg
     6781 acctaaaaat ttcgtgcctt gatagcttaa ataggattcc acttggaaat ggtcgcccca
     6841 aatttgtcct tgctgtttgg tttctcgtcc aaaggcttta gcaagttgaa tatcagtacg
     6901 gtaagtcagc ataccgagca tacgggcgat ttttaagccg ttatcaggtg caatgccatc
     6961 ataatagttc ccaccgttaa agtgtggatc gttaataata gcttggcgca taacgtggtt
     7021 aaaaccgata gcctcggcac ttagggtaag tgacgaacaa agatttataa tgttgcgaac
     7081 tttatcaggg taactaatac cccactgtgt tgcttgcatt ccgccgaaag atccccctac
     7141 cactgcgtga agttgaggga tttctaaata gtccaataat gctttttgta cattaacaat
     7201 atcttgcact gtaataattg gaaacaaact accgtaaggt ttattggttt tagggttaat
     7261 cgaagctggg ccggttgtgc ctttacaacc gcctaataca ttactgcaaa taaagaaata
     7321 tttatcggta tcaaacgcaa gccctttgcc gatgaaatct tgccaccagc ctttctcggt
     7381 tggtgagtca tagtaaggct tagcatcacc ggtaagggcg tggcaaagca agaccgcatt
     7441 gcttttctct gcatttaatc tgccgtaagt ctggtaagcc actgtgatag gggacagttc
     7501 gcctcctaat gtgagtggta aaggtacgtc ctcaaaaagg gtaatctgct gagccataaa
     7561 aatcctgttt gcaaaaaatt ctgctttttt gaccgcttgt tgtaatgacc gttaaattag
     7621 cggtgttcat ttcaattgtc aagaattttt agacgtctaa acgtctagat ttttaaacgg
     7681 ctaaaatcaa aattttattg ctgagaagat atttattact taacaaataa catgaaatag
     7741 aataaattta ttgaacgatt agactatttt gtttgtctct aatttaccca tcttaaatag
     7801 ggtagcaaaa gtaaaggatc tcatttgaac caaacgcgtg ataggttaga aaaattgcca
     7861 cttttccata aaatgcagca gtttattatt aaggcattga aaataattgc aattttcccc
     7921 ttattgggaa tagctatatt attagtggtt gattcactta caagttatat tgtgagggat
     7981 aaaatttata cagatagtaa acagattcct taccgggagt atgcagttgt actcggtacg
     8041 gcaaaatttt actctaaaga tgtgattaac caatattata aatatcgttt ggaagccgct
     8101 aagcaattag tccaagaagg aaaggtcaat cagcttttgt taagtggaga taataaaacg
     8161 ccgtactata atgagccaaa aacaatgaca agtgatctac ttaaaatggg gattgcgact
     8221 tcaaaaatta agcaggatta tgcggggtat accacttttt attcaataat tagggctaaa
     8281 aaagtatata aattaccgcc atttacgatt atctcccaaa aattccactg tgaaagggca
     8341 ttgtttattg caaaatttag ggatattgat gcaatttgtt atgccgctac atatccagag
     8401 ggggcttatc aggtacgaat gcgggaaatt ttagccagat cggcaatggt ttttagtttg
     8461 ttgataggta aagagcctga atcattggaa gatatccgtt ctaaatgaga tagccggtca
     8521 gataatgttg accggctatt ttgcttataa aataatggtt ttgtttttat atacaaatac
     8581 tttgtcagca agcactaatt ctaaggcttg gctaagtacg gttttctcga catcacgtcc
     8641 ggcacgcatc atagcctctg cggtgtaggt gtgatcaaca ttaatcacat tttgcataat
     8701 aatcgggcct tcatctaatt catcattcac aaaatgggcg gttgcaccga taattttcac
     8761 tccacgttcg tatgcacgat gataaggttt tgcaccaatg aaagcgggta agaacgagtg
     8821 gtgaatattg acaactcggt ttggataacg agcgacaaat tccggattca gcacccgcat
     8881 atatttagcc aacacaatat aatcaggtga atattcatca attttttccg ctaataattt
     8941 atcgtgttcc actcgggtta aattttcgtg gctgactaaa tggaatggaa tatcgaaacg
     9001 ttcaactaaa ctttttaatg tttcgtggtt tccaatcacg gcagcaattt ctacatctaa
     9061 tccaccatag taatttttca tcagtaagtc acctaaacaa tgtgcttctt tggtaactaa
     9121 aataacgata cgttttcttt gtttagggag taatttatag cttgagcctt caggtaaggt
     9181 aaattttaaa tcagtgagta aggtttcatc attaaaaatt ccgtttaatt cggtacgcat
     9241 aaaaaaacgt ttagtttcat tctcaacaaa ttcagaattt ttaataatat ttaattggtg
     9301 cttatagcaa atattggtaa ttttagcgac aagtcctgta tcatcaggac attcagttaa
     9361 taatattttg tgttgttgta gcatttcatt tcctatt
//
LOCUS       DANLZQ010000098         9360 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.098, whole genome shotgun sequence.
ACCESSION   DANLZQ010000098 DANLZQ010000000
VERSION     DANLZQ010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9360)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9360)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9360
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.098"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(206..916)
                     /locus_tag="PXE50_002083"
     CDS             complement(206..916)
                     /locus_tag="PXE50_002083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4189 domain-containing protein"
                     /protein_id="HDL5622955.1"
                     /translation="MFMVIQLALYNLQTYEVGRNATTIFMTTDKVYTGGSTWTYLFAD
                     ADNKITSVREMNGFGDVEKEFKCGEYKEAVTIASKEDLAKRKTQPRLWSSIYMSPEQN
                     MMWVTDNTSKNLENAKQDAFKQCEKNGGRNCQMILSFSNMCLAFAQGYKDGQGFEDFG
                     YGIVSSLAEENALENCNQKGGSSCLLSAPAVCAIPCDILSNNKCMYDQPQIIIPGKNN
                     NQPINPPANGNGEHWLSN"
     gene            complement(885..1031)
                     /locus_tag="PXE50_002084"
     CDS             complement(885..1031)
                     /locus_tag="PXE50_002084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622956.1"
                     /translation="MIKPLDSVYWRGKDVSEFFARKRLPDTAVQCVKDNELSYVYGYS
                     TSFV"
     gene            complement(1149..2366)
                     /gene="fabB"
                     /locus_tag="PXE50_002085"
     CDS             complement(1149..2366)
                     /gene="fabB"
                     /locus_tag="PXE50_002085"
                     /EC_number="2.3.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase I"
                     /protein_id="HDL5622957.1"
                     /translation="MKRVVITGLGVISSIGNNKEEVLESLKAGKSGIEFVPEFAEVGM
                     RSQVAGTIKLNPAELIDRKIYRFMGDAAAYAYLSMKEAIEDSGLTEEQVSNDRTGLVI
                     GAGTGSAHSQLVACDAVRGPRGVKAVGPYAVTKTMASSVSACLATPYKIRGVNYSISS
                     ACATSAHCIGHAMELIQLGKQDVVFAGGAEELSWECATEFDAMGAVSTKYNETPTKAS
                     RAYDANRDGFVIAGGGAVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGA
                     ERCMRQAMATVNGEIEYINVHGTSTPVGDVKELGAIRNVFGDKTPAISSTKSMTGHSL
                     GAAGAHEAIYSLLMLDNNFIAPSINIETLDEQAQGMNIVTERQDKALTTVMSNSFGFG
                     GTNACLVFQRYSK"
     gene            2627..5164
                     /locus_tag="PXE50_002086"
     CDS             2627..5164
                     /locus_tag="PXE50_002086"
                     /EC_number="4.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate cyclase"
                     /protein_id="HDL5622958.1"
                     /translation="MKTLTLTANKITAVEGAAIGANQGSFAQKLNSTKARIDQLNAYR
                     IERAINANNHHFMHVFSLIPLLIHLNHPVLPAYVENAPQGIWHFQLSDYQKQFLVSYR
                     FDEAISADHLGPHPSFDALYSMGSTGTITQTSCSDLDLWLCYPNHFTIEQYKLMELKI
                     NKLQEWAKTFQIDINIYLMNPEQFKSQTYNSSVTDEHSGSAQHFFLLDEFYRSAILLA
                     GKRLLWLHLHKNEYQNVHNNPEIDLTEWIDFGDFSSLSTSEFFGASLWQLYKGINNPY
                     KSAIKILLLECYAHTYPKTKLISKEFKKKLLSDNALEYHFDPYLAMLELVTEHLRSRK
                     EWVKLDRLRVCFYAKAVEGEINNNWRSRDLDELVNQWSWSEKQIQLLQNRQHWKIKQV
                     MNHENMLIDHLLQSYRNLIHFARKFHINPSIMTNDTDILMRKLYSVFEALPGKISLIN
                     HKISSNLAEKAITFIEAKVGSALQPGWYLVNQAPKSRYDSENRYVHYNKSPIKLIAWG
                     YFNGIINAATNLHTVSPNLDIEKLRQFITDLRLSFPIQAPEVTNDDMHHPNEIRNLVI
                     ALNLVQDPTEHIDELPKKVYPSDLFNFGKAQKTLVGSVSIIYRNVWNEIRTQHFDGED
                     AILKALKLVSNRIYQGNSSPQSVNVFCYSKYLRSELRDFVADLVHKCITIQTGCLLQE
                     NEFSTLKVAGKTWQFLFHKKTFSIKQIDEQQAVENLNSFAKTKQNAKSENEKKKEFPQ
                     QISEFASEGFLQFFFEDNVDNSFNVYVVDERNNVESYYNCFGNKEEKIRKINKLQNEK
                     QLKTETPASFGSFNHPQFYQLISPNGELCIVPFQSRQHLDYLAQKHH"
     gene            5195..7063
                     /locus_tag="PXE50_002087"
     CDS             5195..7063
                     /locus_tag="PXE50_002087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HDL5622959.1"
                     /translation="MSGLVSPELIKTVALLATSVTIVPLFKRLGLGSVLGYLVAGCLI
                     GPSGIGLFQDPAAVVHMAELGVVMFLFIIGLEMHPELLWAMRKAIFGRGFLQVAICGT
                     LLTLAGIYLLGFSKEVAFIAGMGFTLSSTAIVMQVLEDKGISSTPKGQRIVATLLFED
                     LAIVPLLASVAFLAPNQVDAESSTNWSAIGLSLVAVLILVASGKWLMNPIFRVISKAK
                     VREMMTAAALLVVLGSALLMEISGLSMAMGAFLAGVMLSESSFRHQLEADIEPFRGLL
                     LGLFFMGVGMSLDLSLVLNNWLWLLVIVAVYVIGKGLGIFIAASITRLTLNESIVRTT
                     IMAHGGEFAFVLFSAAATAGILTPDTHATLTAAVIVSMLLSPLLILIKQGVRKKKAKN
                     ESTNMTGVELPEDLEANVLVIGFGRFNQIVCQALLAKGLSVSVIDSNTDHIRAAARFG
                     FKLYYGDGARLDVLRASGIANANCVIVGVGNPERTEKIVELIKSEYPLVPVFARTYDR
                     QSAVDLVKKHHVDYHIRETFESALALSQAAIERLGSSEEEAKQIISYVRRLDAERFNE
                     ELLHGFSAEVIRKYWVPTPWVNPQHEGSALNEETADILEELGETVEVIKVDITDKN"
     gene            complement(7223..8119)
                     /gene="malM"
                     /locus_tag="PXE50_002088"
     CDS             complement(7223..8119)
                     /gene="malM"
                     /locus_tag="PXE50_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose operon protein MalM"
                     /protein_id="HDL5622960.1"
                     /translation="MKKTLLSTAIFFAHLLVVSPSIANGSAGKSIHINSAELAQIQWQ
                     DVPFSQTVKTDLSEQHKQAFTTAFAGIASPVAAYRIPANQGTLEIEIESPVMDKNVFV
                     PTAVVLDSQFNVASTYPSSEFKLLEERGLKGSRLGAELNLTPAMNQDYIYLLIYTTQQ
                     DLAKTTMMPHPAKTYAKATGKQPPAINDIEVAHSLKGQIHINVTGSNGTKFIGLPTEI
                     FSSNKAATPAAKTAIPLPIKENPVAVKTAVDKDTEAYFNQAVMKAIKAKDINKAMNLV
                     NEAEKLGLTSPRQIFLKNVSSN"
     gene            complement(8200..>9360)
                     /locus_tag="PXE50_002089"
     CDS             complement(8200..>9360)
                     /locus_tag="PXE50_002089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005610460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltoporin"
                     /protein_id="HDL5622961.1"
                     /translation="FTVNGGGSKYRLGNESDTYAELKLGQELFKSGEKSIYFDTNLAY
                     GGTLHNNDWTPTSPALRELNVQFKNFADSLPGATLWAGKRFYQRHDVHMNDFYYWDIS
                     GPGAGVENIDLGFGKLSLAVTRDTERGGANTFGYTTVYKLDPSTGKIKLDKQRNKADV
                     YNDIFDVRLAGIELWKDGSLELGFDYGNAHAKKGAALEKGATKNGYMVTAEYTQGNFF
                     GGFNKFTAQYATDSMTSWNNGHAQGSKADNKGNMLRLINQGVVQASDKVEVMYALIYE
                     KTKLDNKQGKTWYSAGIRPMYKWNDTMSTLLEVGYDRIKDQATGKKNDLVKYTVAQQW
                     QAGNSIWARPAIRVFGTYARWNDKFNTKARTDAGYKAKDGEFITGVQFEAWW"
BASE COUNT         2849 a         1877 c         1693 g         2941 t
ORIGIN      
        1 tagagagtat gaaatgataa gaaagcattt ataaaaatga tttaataaga attaaaaact
       61 aagatagaat ataaaaatgg ttttaaataa aattaaaaat aaattgtaaa tttttattta
      121 ccaagatttt tagcaaagtt ttcactaaaa atgaccgctt gcaggcaata aaaaagtgcg
      181 tttccgcact ttttactaaa atgatttaat tactcaacca atgctcaccg ttgccattag
      241 ctggtggatt aatcggttgg ttattattct tacctggaat aataatttga ggctgatcgt
      301 acatacattt gttgttcgac aatatatcac agggaatagc acatacggca ggggcagaaa
      361 gaagacaact tgaaccacct ttttgattac aattctctaa tgcattttct tcagcaagac
      421 tactaacgat accataccca aaatcctcga agccttgacc atctttataa ccttgtgcaa
      481 aagcaaggca catattacta aacgataaga tcatttggca attacgacca ccgttctttt
      541 cacactgttt aaacgcatct tgcttcgcat tttctaaatt tttagacgta ttatcagtca
      601 cccacatcat attttgttca ggtgacatat aaattgatga ccataaacga ggctgtgttt
      661 tacgctttgc taagtcctct ttactggcaa tggttaccgc ttctttatat tcaccacatt
      721 taaactcttt ttcgacatca ccaaaaccat tcatttcacg aacagaagtg attttattat
      781 cagcgtcagc aaaaagatat gtccaagtcg atccacctgt ataaacctta tctgttgtca
      841 taaatatagt ggttgcatta cgaccaactt cataagtttg caaattatac aaagctagtt
      901 gaataaccat aaacatagct taattcatta tcttttacgc attgaaccgc tgtatcaggt
      961 aaacgtttac gtgcaaaaaa ttcagataca tctttaccac gccaataaac actatctagt
     1021 ggcttaatca ttgtagaaca agcggtcaaa aataatgaca aaataacaaa tagcaaagaa
     1081 cttattttga aatttataat aattacctca aaagaaaaaa gagcaagctt tcacttgctc
     1141 tttttatgtt acttagaata gcgttggaac actaaacacg cattagtacc accaaagccg
     1201 aagctgtttg acatcacggt tgttaatgct ttgtcttggc gttcagtcac aatattcata
     1261 ccttgtgctt gttcatcaag ggtttcaata ttaatgcttg gtgcaataaa attattatct
     1321 aacattaata atgaataaat tgcctcgtgc gcacctgctg cacctaatga gtgtccggtc
     1381 attgatttgg ttgatgaaat tgctggcgtt ttatcaccaa agacattacg gatcgcccct
     1441 aactctttta catcacccac tggagtagaa gtgccgtgta cgttaatata ctcgatttca
     1501 ccatttacag ttgccatcgc ctgtctcata caacgctcag caccttcacc acttggcgcg
     1561 accatatcgt aaccgtctga ggttgcccca tagcccacaa tttcagcata gattttggca
     1621 ccacgagcaa gagcgtgttc taactcttcc accacaacca ctgcaccacc accggcaatc
     1681 acaaaaccgt cacgattagc atcataagca cggctagctt ttgttggtgt ttcattatat
     1741 ttagttgaaa cagcacccat tgcatcaaac tcggttgcac attcccaaga aagttcttct
     1801 gcaccacctg caaacaccac atcttgttta cctaattgga ttaactccat cgcgtgtcca
     1861 atacagtgtg ctgaagtcgc acaagctgag ctgattgaat agtttacacc acgaatttta
     1921 taaggtgttg ccaagcatgc tgacacactt gatgccattg ttttggttac tgcgtaaggc
     1981 ccaacggctt tcacaccacg tgggccacgt actgcatcac aagctacaag ttgactgtgc
     2041 gccgagcctg taccagctcc gatcaccaaa ccggtacgat cgtttgaaac ttgttcttcg
     2101 gttaagcctg agtcttcgat tgcttctttc attgaaagat aagcgtaagc cgcagcatct
     2161 cccataaaac gatagatttt acggtcaatt aactcagccg gatttaattt aatcgtacct
     2221 gccacttggc tacgcatacc cacttcagca aactcaggca caaattcaat gcctgattta
     2281 cctgctttta gtgattccaa cacttcttct ttgttgttac cgatactgga aattacacct
     2341 aatcctgtaa taacgactct tttcattttg tttccttcat cattttgatc tgaaaaatac
     2401 ttgattcagc ttacacttgt tcactcaaat aagctactaa aacttgatta ttttacacaa
     2461 tttcattact ggtctgaact ctttctatca agatagcggt tgaatttcag acattttttg
     2521 caaaataggg aatgaaattt aatttcccga ttttttaccc tattacataa taatcacttt
     2581 tccgctaaaa tgctaaacag ttcacacttt agtaaggaaa gctgacgtga aaacattaac
     2641 cctgacagcc aacaaaataa cagccgtaga aggcgctgcc attggggcga accaggggag
     2701 cttcgcccaa aaattaaact ctactaaagc acgaattgat caacttaatg cataccgaat
     2761 agaacgagct atcaatgcta ataatcatca ttttatgcat gttttctctc tcattccatt
     2821 gcttattcat cttaatcacc ctgtgttacc ggcttatgtt gaaaatgcac cacaagggat
     2881 ttggcatttt caactctctg attatcaaaa acaatttctg gtttcttacc gttttgatga
     2941 agcaatctct gccgatcatt tgggccccca tcccagcttt gatgctcttt attcgatggg
     3001 tagcaccggt actattaccc aaacaagctg ttctgattta gatttatggc tatgctatcc
     3061 gaaccatttt acaattgaac aatataagtt aatggagctc aaaattaata aattgcaaga
     3121 atgggcaaag acattccaaa tcgacatcaa tatttattta atgaacccag aacaatttaa
     3181 gagccaaact tataacagta gcgtaaccga tgaacacagt ggttcagcac agcatttttt
     3241 tctattagat gaattttatc gttcagctat tttacttgcc ggtaagcgtt tactctggtt
     3301 gcatttacat aaaaatgaat accaaaatgt tcacaataac cctgaaattg acttaacgga
     3361 atggattgat ttcggcgatt tttccagcct ttcaaccagt gaattttttg gtgcaagctt
     3421 atggcagctc tacaaaggaa ttaataaccc ttataaatcg gcaattaaaa ttttattgct
     3481 cgaatgctac gctcacactt atcctaaaac aaagctcatc tccaaagaat ttaagaaaaa
     3541 actactaagt gacaatgctt tggaatatca ctttgatccc tacttagcca tgcttgaatt
     3601 ggtaacagaa cacttaagat cacgcaaaga gtgggtgaaa ttagaccgct tgcgagtctg
     3661 tttttatgca aaagcggttg agggagaaat aaataacaac tggagaagtc gtgatttaga
     3721 cgagctggtt aaccaatggt cttggtcaga aaaacaaatt caattacttc aaaaccgtca
     3781 acattggaaa attaagcaag tgatgaatca tgagaatatg ctgattgatc atttactaca
     3841 aagttatcga aatttaattc attttgctcg aaaatttcat attaatccga gcattatgac
     3901 aaatgatact gatattttaa tgcgaaaact ttattctgta tttgaagcac ttccaggaaa
     3961 aatatcttta attaatcata aaatatcgtc caatttagca gaaaaagcaa ttacatttat
     4021 tgaagctaaa gttggatctg cgttacaacc cggttggtat ttagttaatc aggcacctaa
     4081 aagtcgttat gactctgaaa atcgttatgt ccattataat aaaagcccga ttaagcttat
     4141 tgcttggggg tattttaacg gcattattaa cgcagcaact aatttacata ctgttagccc
     4201 taatttagat atcgagaaat tgcgacaatt tatcaccgac ttgcgcttat ctttcccaat
     4261 tcaagcgccg gaagtgacca atgatgacat gcatcaccct aatgaaattc gcaatttggt
     4321 tatagcgctt aatttagtac aagatccaac cgaacatatc gatgaactac caaaaaaagt
     4381 ttatccaagc gatctgttta attttggtaa ggcacaaaaa acgttagttg gtagtgtgag
     4441 cattatttat cgaaatgtat ggaatgaaat tcgaactcaa cattttgacg gtgaagatgc
     4501 tattttaaaa gcactaaaat tggtatccaa tcgaatttat caaggaaatt cttcacctca
     4561 atcagttaat gttttttgct atagtaaata tctacgtagt gagttacgtg attttgtggc
     4621 agatttagtt cataaatgta ttacaattca gactggttgt ttactgcaag agaatgaatt
     4681 tagcacttta aaagtagcag gaaaaacctg gcagtttctt tttcataaaa aaacatttag
     4741 cattaaacaa attgatgaac aacaagcggt tgaaaattta aattcttttg caaaaaccaa
     4801 gcaaaatgct aaaagcgaaa atgaaaagaa aaaagaattt ccgcagcaaa ttagtgaatt
     4861 tgccagtgaa ggctttttac agtttttctt tgaagacaat gtcgataata gttttaatgt
     4921 atatgttgta gatgaacgta ataatgtcga aagttactat aactgtttcg gcaataaaga
     4981 agagaaaatc aggaaaatca ataaattaca aaatgaaaaa caattaaaaa cagaaacacc
     5041 agcatcattt ggaagcttta atcatccaca attttatcaa cttatttcac caaacggtga
     5101 gttatgtatt gtgccgtttc aaagccgcca gcatttagat tatttagcac aaaaacatca
     5161 ttaatcttat ttatattata caggtgggaa ttctatgtca ggattagtta gtccggaatt
     5221 aattaaaaca gtcgcattac ttgcaaccag cgtcactatt gtaccgctat ttaaacgcct
     5281 tggtttagga agcgtattgg gttatttagt cgcaggatgt ttaatcgggc catcgggcat
     5341 tggattgttc caagaccctg ccgctgttgt gcatatggca gaacttggcg tggttatgtt
     5401 tttgtttatt attggtttgg aaatgcaccc ggaactgctt tgggcgatgc gtaaagccat
     5461 cttcgggcga ggtttcttac aagttgcgat ttgcggtact ttattaacct tagccggcat
     5521 ttacttatta ggtttttcca aagaagtggc atttattgcc ggtatgggtt ttacgctatc
     5581 ttctactgcc attgtaatgc aagtgctgga agataaaggg ataagttcca cgccaaaagg
     5641 gcaacgtatt gttgcaactt tactatttga agatttagcg attgtgccat tattagcctc
     5701 ggttgccttt cttgctccta accaagtaga tgctgaatcc agtactaatt ggtctgctat
     5761 tggtcttagc ctagttgccg ttcttatttt ggttgcgagt ggaaaatggc tgatgaaccc
     5821 tattttccgt gttatttcta aagccaaagt acgagaaatg atgactgccg ctgccttact
     5881 tgtggtatta ggctccgctc ttttaatgga aatcagtggg ctttcaatgg caatgggggc
     5941 attccttgcc ggagtaatgc tttcggagtc ttctttccgc catcaactag aagctgatat
     6001 tgaacccttc cgtggtttac ttttaggctt attctttatg ggcgtaggaa tgtcattaga
     6061 cctcagcctc gtcctcaata attggctatg gttattggtg attgtagcag tttatgttat
     6121 cggtaaaggc cttggaatct tcattgctgc ctctatcacc cgattaacac tgaatgaatc
     6181 tattgtgcga actaccatta tggctcacgg tggtgaattt gcctttgtgc tattctcagc
     6241 cgccgcaacc gctgggattt taaccccaga tactcacgct accttaaccg ctgcggtaat
     6301 tgtctcaatg ttgctttccc cacttctcat tttaatcaag caaggagtga gaaagaaaaa
     6361 agcgaaaaat gaatccacta atatgacagg ggttgaatta ccggaagatt tagaagccaa
     6421 tgtattagtc atcggttttg gacgctttaa ccaaatagtc tgccaagcct tattagccaa
     6481 aggactaagt gtatcggtta ttgattcaaa tactgatcat attcgtgctg ctgctcgttt
     6541 tggttttaaa ctttactatg gtgatggagc gagactagat gtacttaggg catctggcat
     6601 cgccaatgca aactgcgtaa ttgttggcgt aggcaatccg gaaagaacgg agaaaatcgt
     6661 agagctgatt aaatctgaat accccttagt acctgtattt gcgagaacct atgatagaca
     6721 aagtgcggtt gatttagtca aaaagcacca cgttgattat cacattcgag aaacctttga
     6781 atcagccctc gcattaagcc aagccgccat tgaacgctta ggttctagcg aggaagaggc
     6841 aaaacaaatt atcagctatg ttcgccgatt agatgcagaa cgctttaatg aggaattatt
     6901 acacggtttc tccgcagaag ttatccgcaa atattgggta ccaacacctt gggtaaatcc
     6961 acaacacgaa ggtagtgcac ttaatgaaga aacggctgat attttagaag agcttggtga
     7021 gacagtagaa gttataaaag tggatatcac tgataaaaat taaagaattt atactttgaa
     7081 tccttattca agtataagcc ttcctataca tatcgcataa tcactcgtaa aaaagcaccc
     7141 tatcggcata atctgatagg gtgttaatgg taataaacca tcgcacgatg acaaggagaa
     7201 tatctatgaa aaaaacaata aatcaatttg aacttacatt ttttaagaaa atttggcgtg
     7261 gagaagtcag ccctaatttt tctgcctcgt taaccaaatt catcgcttta ttaatatctt
     7321 ttgctttaat cgctttcatt accgcctgat taaaataggc ttccgtatct ttatctactg
     7381 ctgtttttac tgcaactgga ttttctttta tcggcaacgg tatagccgtt ttagctgccg
     7441 gcgttgctgc tttgtttgag ctgaaaattt cagtcggtaa tccaataaat ttagtgccgt
     7501 tcgagccggt aacgttgatg tgaatttgcc cttttaaact gtgtgctact tcaatatcgt
     7561 taattgctgg tggttgttta ccggttgctt ttgcataggt ttttgccgga tgcggcatca
     7621 tcgtggtttt ggctaaatct tgctgcgtgg tataaatgag caagtaaata taatcttggt
     7681 tcattgccgg cgttaaatta agttctgccc ctaaacggct acctttgagt cctcgctctt
     7741 ccaataattt aaactcagaa gaggggtaag ttgatgccac attaaattga ctatccaaca
     7801 cgactgccgt gggtacaaaa acatttttgt ccatcaccgg gctttcgatt tcaatttcca
     7861 atgtgccttg atttgccgga atacgataag ctgcaaccgg gctggcaata ccggcaaacg
     7921 ctgtggtaaa tgcttgtttg tgttgctcgc ttagatctgt ttttacggtt tgtgaaaatg
     7981 gcacatcttg ccattgaatt tgagctaatt cagccgagtt aatatgaata gacttacctg
     8041 ccgagccatt tgctatactc ggagacacca ccaaaagatg ggcgaagaat attgctgtcg
     8101 aaagaagcgt ttttttcata ttaaccccta aaaatcgtga aataggataa agtgctgaaa
     8161 tagtgggtag gtaatcctac ccacacaaag gtttgatgat taccaccaag cttcaaattg
     8221 aacaccggtg ataaactcgc cgtctttggc tttatagccg gcatcggtac gagctttcgt
     8281 gttgaattta tcattccaac gtgcataagt accaaacaca cggattgcag ggcgagccca
     8341 aatgctatta ccagcctgcc attgttgtgc aacggtgtat tttaccaagt catttttctt
     8401 gcctgttgct tgatctttaa tgcgatcata accaacttct aataatgtac tcattgtatc
     8461 attccatttg tacattgggc gaatacctgc tgagtaccaa gttttacctt gtttattatc
     8521 tagttttgtt ttttcgtaga ttaaggcata cattacttca actttatcac tcgcttgcac
     8581 taccccttgg ttgattaaac gaagcatatt acctttatta tctgctttcg aaccctgtgc
     8641 gtgcccatta ttccaagaag tcatagagtc ggttgcatat tgtgcagtaa atttattgaa
     8701 accaccaaag aagttacctt gagtgtattc cgctgttacc atataaccgt ttttggttgc
     8761 tcctttttca agggctgcac ctttcttagc atgtgcatta ccgtaatcaa agcctaactc
     8821 taacgaacca tctttccaaa gctcaatacc ggctaaccga acatcaaaaa tatcgttgta
     8881 aacatcggct ttattacgct gcttatctaa tttaatttta cctgtgctag gatctaattt
     8941 ataaactgta gtatatccaa aagtattcgc ccctccacgc tctgtatcac gagtaaccgc
     9001 taaagagagt tttccgaagc ctaaatcaat attttcaacc cctgcacccg gacctgaaat
     9061 atcccagtaa tagaagtcat tcatatgtac atcatggcgt tggtaaaaac gtttaccagc
     9121 ccataaggtg gcacctggta aactatctgc aaagtttttg aactgtacat ttaattcacg
     9181 tagtgctgga cttgttggtg tccaatcatt attgtgaagc gtaccgccgt aagcaaggtt
     9241 tgtatcaaag tagatagatt tctcaccact tttgaataat tcctgaccta atttcaattc
     9301 tgcataggta tcagattcgt tacctaaacg gtattttgaa ccaccaccat ttaccgtgaa
//
LOCUS       DANLZQ010000099         9054 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.099, whole genome shotgun sequence.
ACCESSION   DANLZQ010000099 DANLZQ010000000
VERSION     DANLZQ010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9054)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9054)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9054
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.099"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(<1..636)
                     /locus_tag="PXE50_002090"
     CDS             complement(<1..636)
                     /locus_tag="PXE50_002090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5622962.1"
                     /translation="MAEILFRSCLCCNAKRIFYLLTFYKGFETSQIATAFSLLVFTSQ
                     AFSLFAGSWGDSFGRYPIMMLGCLLDALAYILLLTTKNYPLLLLATFFFGLGSTLFST
                     NARAFLLANIQDTGDSYQLKTKAQGKFLKVSSLSAMVAPLLTIPFIFYRKAEWLIWIS
                     CCIEIIMLFVMFKTAPKTHECANGQCERFKFGALKGILNEQFIFVHLLLFIP"
     gene            719..1180
                     /locus_tag="PXE50_002091"
     CDS             719..1180
                     /locus_tag="PXE50_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HDL5622963.1"
                     /translation="MRKIKLLHVILSLILGLSAAAIGSYPAIKEIGEERAKKHQDILD
                     LNRELYSAMVNRDFSALQTLLSDDFELYSSTGEVIDKQEWIKLIQKRVLEFDKVDLLS
                     TDFQGNQSSGLLRVNGEFFGIERDNVVVEMNIRTIVRNTERQIKCIVIKEV"
     gene            1193..2086
                     /gene="murQ"
                     /locus_tag="PXE50_002092"
     CDS             1193..2086
                     /gene="murQ"
                     /locus_tag="PXE50_002092"
                     /EC_number="4.2.1.126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HDL5622964.1"
                     /translation="MNALGQMITEQRNPNSMNIDRLSALDIVQVINQEDKQVAIAVEQ
                     CLPQIAQAVEKIVQAFEKGGRLVYVGAGTSGRLGVLDASECPPTYGVKPEMVVGLIAG
                     GERALRFPIEGAEDNREQGKVDLQAVNFSEKDVLVGIAASGRTPYVLGAMEYAKQLGA
                     TTVSIASNPNSAMAQIADIAIETVVGPEVLTGSSRMKSGTAQKLVLNMLTTASMILIG
                     KCYQNLMVDVQATNEKLKARAIRIVMQATECEREVAEDTLKLAENNAKLAIMMILGNL
                     DKQKAEDLLSQNQGRLQKALK"
     gene            complement(2170..3114)
                     /gene="prmB"
                     /locus_tag="PXE50_002093"
     CDS             complement(2170..3114)
                     /gene="prmB"
                     /locus_tag="PXE50_002093"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HDL5622965.1"
                     /translation="MFKYNTELLDEISALPIVNDLVTIQDMMRWGYSYFNASDLYYGH
                     GYDNAWDEAQQLVLAGLYLPFDVPETLYSSRLTRVEKERIINLICERLGSRKPVAYLT
                     NSAWFCGGEYYVDERVIVPRSPIGELIKKGFKGIIKNEPHRILDMCTGSGCIAIACAE
                     RFPEAEVDAVDLSLDALDVAQINIERHQVSHRVFPICSDLFNNLPQDKYDLIVTNPPY
                     VDEEDLGDMPEEFHHEPALALGSGKDGLDLTKRILAQAADYLNDDGVLVCEVGNSMVH
                     LIEQFPSVPFNWLEFEHGGLGVFSLTKEELVKHRHLFA"
     gene            3207..3752
                     /gene="smrB"
                     /locus_tag="PXE50_002094"
     CDS             3207..3752
                     /gene="smrB"
                     /locus_tag="PXE50_002094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease SmrB"
                     /protein_id="HDL5622966.1"
                     /translation="MNDTLLDDEFALFREAAKGTKKLTQNTFVPKAEPRKKLQELREL
                     KEKADTEFYFSDEYEPLLKEENEKVKYLREDVDPYILKQLRRGDFQPELFLDLHGLTR
                     EKAKKELAALILACEREKVYCASVMTGFGTRTLKDQIPRWLVQHPKVMALHQAPKEWG
                     GDASILILVEQPENPEKMFGR"
     gene            3816..4301
                     /locus_tag="PXE50_002095"
     CDS             3816..4301
                     /locus_tag="PXE50_002095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaK/prolyl-tRNA synthetase associated
                     domain-containing protein"
                     /protein_id="HDL5622967.1"
                     /translation="MSEQTFHQLTALLDSHRARYRVVGHPSAGKSEEVAKIRGTEIGQ
                     GAKALVCKVKGNGVKQAVLAILPADYQADLTKIAEHLGGLRASLASPAEVAELTDCVF
                     GAIPPFSFHPDLLLVAEPSLFERYAELAFNAGTLERSIILNTEDYQKIVNPVLVQFAK
                     S"
     gene            complement(4303..5052)
                     /locus_tag="PXE50_002096"
     CDS             complement(4303..5052)
                     /locus_tag="PXE50_002096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HDL5622968.1"
                     /translation="MEKRFEINEQGLSIRCKLFYEKELQQIENVVIVLHGFGSSKDLK
                     SNTKFGERLSSKYKGYAALAFDFPCHGDDARKKLSVEESITYLQLVIDYAKTSLNAKN
                     LYAYGTSFGGYLTLKYLAEKGNPFRKIALRAPAVQIYHSLMNRLSEEERQKLAKGREI
                     LWGFDRQMKISQAFFDELTDITQNDYLDYAEQILILHGTEDEMVALSTSQQFADNNVI
                     ELLPIEGADHAFSNPKLMDIAIGKIVEFFAP"
     gene            5224..6087
                     /locus_tag="PXE50_002097"
     CDS             5224..6087
                     /locus_tag="PXE50_002097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA/RhaT family transporter"
                     /protein_id="HDL5622969.1"
                     /translation="MLQLILAILCSVTVGVLIKFARQKGIRIDQSIAVNYIVTTTMTF
                     LLLKPDYQGQSITDIIANNPTSYIFVILSITLPTIFLVQAKALEFAGIIRTDAAQRLS
                     LFLPILAAFTIFGEQVTQNKLIALLLAFVALGCLLWKGNQGMEKGGKIAIISLALVWV
                     GYGVNDILFKQIAKSGSAFPVTLSIAFIGAGCFMFIYLLLKRTQWHVPSVLTGLLLGV
                     LNFGNILFYIQAHQAMKDDPTLVFTGMNLGVICLGTFVGAFFFKEKIHKVNYLGVAIA
                     IVAIICLFYWR"
     gene            6211..6804
                     /locus_tag="PXE50_002098"
     CDS             6211..6804
                     /locus_tag="PXE50_002098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622970.1"
                     /translation="MKLKALSTLIASSMLYSQSFAVPPEKTAEEPQPFFNKTESGYDL
                     VFNDQNYRLIETELNGEKIQFRAFERIVYVNNPIEPDYQTINLYVPEAYYNNGEINGY
                     QADTAPIFLPNSVGGYMPAKAASYDKKRRDGSPGTILVALSKGYVVASVGARGRTLQK
                     EGKYTGKAPSAIIDSKSAAHKACRFESDHWHHSLCKI"
     gene            7159..7470
                     /locus_tag="PXE50_002099"
     CDS             7159..7470
                     /locus_tag="PXE50_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5622971.1"
                     /translation="MVIIMLSKTKSPTLFPKYQNALLQLGENIRLASKRRMFTQTLLA
                     QRTGLSRVTVRKIMNGDPTVAIGYYLMVLGVLGLEQDFTDVGKDDELGRKLQDIELLR
                     K"
     gene            7470..8711
                     /locus_tag="PXE50_002100"
     CDS             7470..8711
                     /locus_tag="PXE50_002100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HipA domain-containing protein"
                     /protein_id="HDL5622972.1"
                     /translation="MMNKRIYVFADWETFSQPELVGVLSSDVVRGKENFRFSYDNEWL
                     SSPYVQQIDPNLYLYPGEQYSTDTQNFHIFLDSCPDRWGRLLMKRREAALASQENRKP
                     KLLIESDYLLGVHDMNRMGALRFKTELNGPFLDNNTRLAAPPLSSLRELEFAAIQLES
                     SDNVDDPDYLKWLHMLISPGSSLGGARPKASVIDELNQLWIAKFPSRYDDYDIALWEY
                     LAYRLAIQAKIEMATCRIERFNQEHHTFLTQRFDRHCGKRRHFTSALTQLGYYDGDYE
                     ASYLEIAQFLTESGSNTRIDLAQLWRRIVFNIAISNTDDHLRNHGFIYAQEGWILSPA
                     YDLNPVPLSQGLHLNITDSDNRLDYQLAFDVADFFQLSKQQAVQIYDEVLKEINNWQN
                     VAKEIGIPRQEQEQMKFAFNV"
BASE COUNT         2846 a         1683 c         1933 g         2592 t
ORIGIN      
        1 cggaataaaa agtaataaat gtacaaaaat aaattgttca tttagtattc cttttaatgc
       61 accaaattta aagcgttcgc attgcccatt tgcacattca tgtgttttgg gtgcggtttt
      121 aaacataacg aatagcataa taatttcaat gcagcagcta atccaaataa gccattctgc
      181 tttacggtag aaaataaatg gaatagtaag taatggtgct accatcgctg acaggcttga
      241 taccttcaga aatttacctt gagccttagt tttgagttgg taactatctc cggtatcttg
      301 aatattggct aataagaatg ctctcgcatt ggtactaaat aaggtgctac cgagcccgaa
      361 gaaaaaggta gcaagtaata gcagagggta attttttgtt gtcagtaata aaatgtaagc
      421 tagggcatcg agcaaacagc caagcatcat gatagggtaa cgtccaaaac tatcacccca
      481 agaacctgca aaaagggaaa atgcttggct ggtaaagacc aacaaagaaa atgcagttgc
      541 aatttggctg gtttcaaagc ctttgtagaa tgtaagtaga taaaaaatac gctttgcatt
      601 gcagcataag caagaccgga aaagaatttc cgccataaaa tgatattttg gatattcata
      661 gataatattt aatgagaaaa atgatttcta atataactaa atttaataag gaagcacaat
      721 gagaaaaatc aaattattgc atgttatttt atctttaata ttagggcttt ctgcggcagc
      781 gattggaagt tatccggcaa taaaagagat tggcgaggag cgggcaaaaa aacatcaaga
      841 tatattagat ttaaatagag aactttatag tgcaatggtg aaccgtgatt tttcggcttt
      901 gcaaacatta ctaagcgatg attttgagct ttattcatca acaggtgaag tgattgataa
      961 gcaagaatgg atcaaattaa tccaaaagag agtattggaa tttgataagg ttgatttgct
     1021 atctaccgat tttcagggga atcaatcatc tggattatta agagtaaatg gtgagttttt
     1081 tgggatagag cgggataatg tggtggtaga aatgaatatt cgaaccattg tgagaaatac
     1141 agaacgccaa attaaatgta ttgtgattaa agaggtttaa gtgtcgcaac tattgaatgc
     1201 cttagggcag atgattaccg aacaacgtaa tccgaattcg atgaatattg accgcctttc
     1261 agcgttagat atagtccaag tcatcaacca agaagacaaa caagtagcga ttgcggtgga
     1321 gcagtgcctg cctcaaattg cacaagcggt ggaaaaaatt gtgcaagcct ttgagaaagg
     1381 tggacgattg gtttatgtcg gtgccggcac gagcggaaga ttaggggtgc ttgatgcttc
     1441 ggaatgtccg cccacttatg gcgtaaaacc tgaaatggtg gttggattaa ttgccggtgg
     1501 tgagcgggca ttacgtttcc cgattgaagg ggcggaagat aatcgtgagc aaggcaaagt
     1561 agatttacaa gcggtcaatt ttagcgaaaa agatgtattg gtcgggattg cagccagtgg
     1621 gcgaacgcct tatgtgttag gggcgatgga atatgctaag caacttggtg cgaccacggt
     1681 gtcgattgcc agtaacccaa attcggcaat ggcacaaatt gcggatattg cgattgaaac
     1741 cgttgtcggg ccggaagtgc taaccggttc cagccgtatg aaatccggca cagctcaaaa
     1801 attggtattg aatatgctca ctactgcgtc gatgatttta atcggtaaat gctaccaaaa
     1861 tttaatggta gatgtgcaag caactaatga aaaactcaaa gctagagcaa ttcggattgt
     1921 gatgcaagcg acagaatgtg aacgagaagt ggctgaagat acactaaaat tagccgaaaa
     1981 taacgctaaa ttggcaatta tgatgatttt aggtaactta gataagcaga aagccgaaga
     2041 tttattaagc caaaatcaag ggcgattaca aaaagcgtta aaatagaagt atgtctgctc
     2101 tccccttgtg ggagagagac agatcaatca ttcattcaga atgattgatc agagagaggg
     2161 gaggcagatt taagcaaata aatggcgatg tttcactagt tcttctttgg ttaaactgaa
     2221 cacccctaag ccaccgtgtt caaattccag ccagttaaac ggcacactgg ggaattgttc
     2281 gattaaatgc accatactgt tgccgacttc gcagactagc acgccatcat catttaagta
     2341 atcagcggct tgagcaagaa tccgcttggt taaatctaac ccatctttgc ccgagccaag
     2401 agctaatgcc ggctcgtgat ggaactcttc gggcatatcg cctaagtctt cttcatcaac
     2461 ataaggcgga ttagtcacaa ttaagtcgta tttatcttgc ggtaaattgt taaacagatc
     2521 ggaacagatc gggaaaactc ggtgagacac ctgatgacgc tcaatattaa tttgagcaac
     2581 gtctaaggca tcaagggaaa gatcaaccgc atcgacttct gcttccggaa aacgctcggc
     2641 acaggcaatc gcaatacaac cgctgccggt acacatatct aaaattcgat gtggctcgtt
     2701 tttgataatg cctttaaacc cttttttgat cagctcacca atcggtgaac gtggcacgat
     2761 cacacgctca tcgacataat attcaccgcc acaaaaccaa gccgagttgg taaggtatgc
     2821 tacaggtttg cgagagccta aacgctcaca gattaaattg atgatacgtt ctttctcaac
     2881 tcgagttaag cgagaggaat aaagtgtttc cggtacatca aacggcaaat aaagccctgc
     2941 caacactaat tgttgtgcct cgtcccacgc attatcgtag ccgtgcccgt aataaagatc
     3001 agaggcatta aaatagctat acccccaacg catcatatct tgaatagtga ctaaatcatt
     3061 cacaatgggc agggcggaaa tttcatcaag aagttcggta ttatatttaa acattggcgt
     3121 gccttttttc gtattgttaa aatggctgtg ttataccaca ttttgctttg tgttagaatg
     3181 taaaaatgaa taagaaggaa aagataatga acgatacgtt attagacgat gaatttgcat
     3241 tattcagaga ggcagcaaaa ggcacgaaaa agctgacaca aaataccttt gtgccgaaag
     3301 cggaacctcg caagaaattg caagaattgc gagaattaaa agaaaaagct gatacagaat
     3361 tttatttctc ggatgaatat gagcctttgc tgaaagaaga aaatgaaaaa gtgaaatatc
     3421 tgcgagaaga tgttgatcct tatattctca aacagttacg gcgaggcgat ttccaacccg
     3481 agctgttttt agatctgcat ggtttaactc gagaaaaagc gaagaaagag ttggcagcgt
     3541 tgattttagc ctgtgagcgg gaaaaggtat attgtgccag tgtgatgacc ggctttggca
     3601 ctcgcacgct caaagatcaa attccacgct ggttggttca gcacccaaaa gtaatggcgt
     3661 tgcaccaggc cccgaaagag tggggcggag atgcctctat tctaattttg gttgagcagc
     3721 ctgaaaatcc tgaaaaaatg tttgggcgtt aaaattcggc tgaattgcca attttttatt
     3781 aaaaacgacc gcttgtgtat cattaaggag aaatgatgtc agaacaaact ttccaccaac
     3841 ttacagcatt attagattcg catcgagctc gctatcgagt ggtaggacat ccttctgccg
     3901 ggaaatcgga agaagtggca aaaattcgag gaacagaaat cgggcaaggg gcgaaagcct
     3961 tagtttgcaa ggtaaaaggc aatggggtaa agcaagctgt gcttgctata ttacctgctg
     4021 attaccaagc ggatttaaca aaaattgcag agcatcttgg tgggttaaga gcctcacttg
     4081 ccagcccggc tgaagtggca gaattgaccg attgtgtatt tggggcaatt ccgccgttta
     4141 gctttcaccc cgatttatta ttggtggctg agccaagtct gtttgagcgt tatgctgaat
     4201 tagcctttaa tgccggtacg ttggaacgtt cgattattct gaataccgag gattaccaaa
     4261 agatagttaa tcctgtgttg gttcaattcg ccaaaagcta ggttatgggg cgaaaaactc
     4321 cacgattttg ccaatagcga tatccattaa tttagggtta gaaaaagcgt gatctgcccc
     4381 ttcaatcggg agcagttcaa tcacgttatt atcggcaaac tgctgtgaag tgcttaacgc
     4441 caccatttca tcttccgtgc cgtgcagaat taaaatttgc tcggcataat ccaaataatc
     4501 gttttgggta atatcggtta gctcatcaaa aaaggcttgg ctgattttca tctggcgatc
     4561 aaacccccac aaaatttctc gccctttggc aagtttttgc cgttcctctt ctgacaagcg
     4621 gttcattaac gaatggtaga tttgtactgc cggtgcccgc aatgcaattt tccgaaacgg
     4681 attgcctttt tccgccagat atttcaaggt taaatagccg ccaaaactag tgccgtaggc
     4741 atacagattt ttagcattca ggctggtttt ggcataatca atcaccagtt gcagataagt
     4801 aatggattcc tcaaccgaga gttttttacg ggcatcatca ccgtggcaag ggaaatcaaa
     4861 ggcaagggca gcgtagcctt tatattttga gctaaggcgt tccccaaatt tggtattcga
     4921 tttcagatct ttagacgaac caaagccgtg caacacaatc actacattct cgatctgctg
     4981 caattctttt tcataaaaca gtttacagcg aatgctgaga ccctgttcat taatctcaaa
     5041 gcgtttttcc attttatgtt aagtattgaa attgaagatg acaaaatttt agcactattt
     5101 gagtgcaagc ggtcggatct ctcgcaaaat ttgcaaattt tccggtaaat ttaaccgctt
     5161 gtactagcca aaatttaagc atatttatag aatacagcct tcgtttttaa aaggagaaat
     5221 gaaatgttac aacttatttt agcgatttta tgtagcgtga ctgtaggcgt gttgattaaa
     5281 ttcgcccgcc aaaaagggat tcgtatcgac caaagtattg cggtgaacta tatcgtgact
     5341 accacgatga cgtttttatt actaaaaccg gattaccaag ggcagtcgat taccgatatt
     5401 attgctaata acccgacttc ctatattttt gtgattttaa gtatcacatt gcctactatt
     5461 ttcttggtgc aagcaaaagc cctagagttt gccggtatta tccgaaccga tgcggcacaa
     5521 cgtttatcgc tgttcctgcc gattttggcg gcattcacca tttttggtga gcaggttacg
     5581 caaaataaat taattgcact tctgttagct ttcgtggcac tcggttgctt attatggaaa
     5641 ggcaatcagg gaatggaaaa aggcggaaaa attgcgatta tcagccttgc tctggtttgg
     5701 gtaggctatg gcgtgaacga tattttattt aaacagattg ccaaatcagg ctctgctttc
     5761 cctgtcaccc tttcgattgc ctttatcggt gcaggctgtt ttatgtttat ctatttgcta
     5821 cttaaacgca ctcaatggca cgttccaagt gtcttaaccg gcttattgct aggcgtgttg
     5881 aacttcggca atattctgtt ctatattcaa gctcaccaag ccatgaaaga tgacccaact
     5941 ttagtcttca ctggaatgaa cttaggggta atttgcttag gcactttcgt tggagcattc
     6001 ttctttaaag agaaaatcca caaagtgaac tacttaggcg tggcgattgc gattgtggcg
     6061 attatttgct tgttttattg gcggtaaata tactttccaa aattaagggc gaacataatg
     6121 ttcgccctta atttttgagt aatatagtgt aaaatattca ataaattcga ccgcttgttg
     6181 taccgattca tatttcataa aggacaaaaa atgaagctaa aagccttatc tacactcatt
     6241 gcctcttcaa tgctatatag tcagagtttt gctgtaccgc cggaaaaaac agctgaagag
     6301 ccacagccct ttttcaataa aaccgaatct gggtatgatt tagtctttaa tgatcaaaac
     6361 tatcgtttaa ttgaaacgga attaaatggc gagaaaatcc aattccgtgc ctttgagcgg
     6421 attgtgtatg tgaacaatcc gattgagcca gattaccaaa caattaatct gtatgtgccg
     6481 gaagcttact acaataatgg cgaaatcaat ggctaccaag cggataccgc cccgatcttc
     6541 ttgccaaatt cagtgggggg ctatatgccg gcaaaagcgg caagttatga taaaaaaaga
     6601 cgtgacggtt caccaggtac gattttggtg gcgttatcta aaggctatgt ggtggcaagt
     6661 gtgggagcaa gaggacgcac gctacaaaaa gagggaaaat acaccggcaa agcaccttct
     6721 gccattattg attcaaaatc cgccgcccat aaagcgtgtc ggttcgagtc cgaccactgg
     6781 caccactcac tatgtaaaat ttagttttac atagtttgct gtaagcattt gaattttgaa
     6841 tcgtttgtgt aggattgttc aaatcatatt cgcaaataca cagttactac gatgtatcca
     6901 gccaatacat ccattgggat tttccgtccg aatttcagac gttctagatc ttacacattc
     6961 tttcaagttt gtaaagcctg aaaatcattt tttagattga ttttatttga aaaaatctat
     7021 tttttctttt aattcaaatt tagtcaaaac ttcaccagat atttttttcc gaaaaaccct
     7081 ctctacctat tttactgttt acataactgc tcttgcaatt gctataaatg gatattataa
     7141 tttccaaaaa acataaaaat ggtaataata atgctcagta aaacaaaatc accaactctg
     7201 tttcctaagt accaaaatgc cttgcttcaa cttggagaaa atattaggct agcctcaaaa
     7261 aggagaatgt ttactcaaac attattggct caaagaactg ggcttagccg tgtaacagtg
     7321 agaaaaatta tgaatggtga tccaactgtt gcgattggat actacctaat ggttttaggt
     7381 gttctcggtc tagaacaaga tttcactgat gttggaaagg atgatgagtt aggacgtaaa
     7441 ttgcaagata ttgaattatt aaggaaataa tgatgaataa acgaatttat gtgtttgcag
     7501 attgggaaac tttttcacag cctgaattag ttggggtgct ttcttctgat gtagtgagag
     7561 gcaaagaaaa tttccgtttt agctacgata acgagtggtt aagttcaccc tatgtacagc
     7621 agattgatcc taacttatac ctttaccctg gagagcaata cagtacagat acacaaaatt
     7681 ttcatatctt tttagattct tgccctgata gatggggtag attgttaatg aaacgtcggg
     7741 aggcagctct agctagtcaa gagaatcgta aacctaagtt actaatagaa agtgattacc
     7801 ttttaggcgt acacgatatg aatagaatgg gggctttacg ttttaaaact gaattgaatg
     7861 gtccattttt ggacaataat actcgtcttg cagcaccacc actgtcttcc ttaagagaat
     7921 tagaatttgc agcaatacaa cttgaaagca gtgataatgt ggacgatccg gattatttaa
     7981 aatggcttca tatgttgata tcaccagggt cgtcactagg cggagctaga ccaaaagctt
     8041 cggtaataga tgaactaaat caactatgga ttgccaaatt tccaagtcgg tacgatgatt
     8101 atgatattgc tctttgggaa tatttagctt atcgactggc tattcaagcc aaaattgaaa
     8161 tggctacttg tagaattgaa cgctttaacc aagaacacca tacttttttg acacaaagat
     8221 ttgatcgaca ttgtggaaaa cgtcgccatt ttacgtcagc attaacccag ctgggttatt
     8281 atgacggaga ctatgaggca agctaccttg agattgctca atttttaaca gaaagtggtt
     8341 caaatactcg aattgacttg gctcaactat ggagaagaat tgtattcaat attgctattt
     8401 cgaatactga tgatcatttg cgtaaccacg gatttatcta cgctcaagag gggtggatat
     8461 tatctcccgc atacgattta aacccagtac cactatctca aggattacat ttaaacataa
     8521 cagacagcga taaccgattg gattatcagc tcgcctttga tgttgctgac ttttttcaat
     8581 tatctaagca acaagccgta cagatttatg atgaagtact gaaagaaatt aataattggc
     8641 aaaatgtcgc aaaagaaatt ggtattccac gccaagagca agagcagatg aaatttgcat
     8701 ttaatgtata gtaattgact tgtggaacca atcatcgtag tctatgttct aaaaaagtag
     8761 cgttacctta ataacgcaat gagttgttgg ctcattgtca atctgatatt aatctaggat
     8821 gtaaaggcct agcggtggca ggcaccagaa agacctgata ctaatctagg gtataaagac
     8881 ctagcggtgg cagacaccag aacaaaccaa catcttataa aaccattagt aacacttgac
     8941 ttttttctca accatatccg caaggaagcg tagccttaaa aacgcaaatg taggaaacta
     9001 atctaggcat atataatgcc tagcagatgg cagacatcag aaaaactaac attt
//
LOCUS       DANLZQ010000100         8892 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.100, whole genome shotgun sequence.
ACCESSION   DANLZQ010000100 DANLZQ010000000
VERSION     DANLZQ010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8892)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8892)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8892
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.100"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            54..3125
                     /gene="fdnG"
                     /locus_tag="PXE50_002101"
     CDS             54..3125
                     /gene="fdnG"
                     /locus_tag="PXE50_002101"
                     /EC_number="1.17.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014550636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:639..641,aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit alpha"
                     /protein_id="HDL5622973.1"
                     /translation="MQISRRKFFKVCAGGMAGTSAAMLGFAPATALAAPREYKLLRAK
                     ETRQTCTYCAVGCGMIMYSLGGEAMNSKGKLIHIEGDSDHPVSRGALCPKGAGALDYV
                     NSDRRVHYPEVREAGSSEWKRISWHEAIERIARHMKNDRDENFVTHNEAGLEVNRWMT
                     AGFLAGSACSNETGIVTQKFIRSLGMIFTDNQASIUHGPTVASLAPSFGRGAMTNHWV
                     DIKNSDLVIVMGGNAAEAHPVGFRWAVEAKKQNGAKLMVVDPRFNRSAAVADIYIPLR
                     PGTDIAFLLGAVNYLLKNDKIQHEYVKHYTNATFLLNEGFKFEDGLFTGYDEATRTYK
                     DKSTWAYQLDEQGQPKRDMTMQDPRCVINMLKDHVSRYTPEMVERITGTPQKDFLIFC
                     EEIAKTSAPDKAATFLYALGWTQHTVGAQNIRSMAIIQLLCGNIGVSGGGVNALRGHS
                     NVQGITDLGLFPHMLPGYIRLPTEADATLESYLNAIAPKTLVAGQVNYGQNNPKFAVS
                     MLKTFYGDKATKENEFGYHYLPKYPKGGTDHFRFIEQMYQGKVNGYFCQGMNPIASYP
                     NSQKLIKALSNLKYLVIFDPLITDTSEFWKNHGEFNNVNPSEIQTEVFRLPTTCFAEE
                     DGSIANSGRWLQWHWKAADAPHEAKPDVDILSEIRAELIHLYHKEGGKAPLEPLEAMT
                     WNYMNPLEPKPEEIAKENNGYALEDLKDADGNIIVKKGELLSSFTQMRDDGTTSGGCW
                     IYCGQWTPKGNQMANRDNSDPSGLGNTLGWAFSWPVNRRILYNRASADLSGKPWNPKR
                     QLVKWNGKNWNYVDVADYGTAPPNSPVTPFIMQPEGVSGLFVRERMQDGPFPEHYEPF
                     ETPIGTNPLHPNVISSPVARILPSDKEDLGTSDEFPYVGTTYRLTEHFHYWTKNALIN
                     VIAQPEQFVEIGEKLAEEKGIKNGDKVRVWSKRGEIKAVAVVTKRIRSLVSDGKPIHT
                     IGVPIHWGFAATTGAKKGYFANNLTVRTGEPNSNTPESKCMLLNIEKIVGA"
     gene            3128..4042
                     /gene="fdxH"
                     /locus_tag="PXE50_002102"
     CDS             3128..4042
                     /gene="fdxH"
                     /locus_tag="PXE50_002102"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit beta"
                     /protein_id="HDL5622974.1"
                     /translation="MSTVQTQNIIKISATSALTPAPQARSHQVEVAKLIDVTTCIGCK
                     ACQVGCSEWNDIRSDVNANCVGVYDNPADLNAKAWTVMRFNEVEENDRLEWLIRKDGC
                     MHCAEPGCLKSCPSPGAIIQYANGIVDFQSDKCIGCGYCIAGCPFNIPRMNPDDNRVY
                     KCTLCVDRVNVGQEPACVKTCPTGAIRFGSKEEMKFYAEQRIADLKSRGYENAGLYDP
                     EGVGGTHVMYVLHHADKPELYSGLPKDPKIDTTVTLWKDVLKPVAAVALGGLALAEVA
                     HYITVGPNVEEDLEEHHHSENAEGGKHE"
     gene            4035..4712
                     /locus_tag="PXE50_002103"
     CDS             4035..4712
                     /locus_tag="PXE50_002103"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HDL5622975.1"
                     /translation="MSKKFEITNDTKIVRHKPLARVSHWFLVISFFMTMFTGVAFFFP
                     DFAWLTEILGTPQIARAVHPFTGIIMFIAFIIMALIYWHHNIPEKNDIRWAKGIVEVL
                     KGNEHKVSDNGKYNLGQKLLFWTLILAMFTLLATGIIMWRQFFSHYFSIPMLRIAILL
                     HSASAFMLFTGILVHMYMAFWVKGSIRGMVEGWVTVRWAKKHHPRWYREEVLPELERQ
                     VAEQNNK"
     gene            4768..5685
                     /gene="fdhE"
                     /locus_tag="PXE50_002104"
     CDS             4768..5685
                     /gene="fdhE"
                     /locus_tag="PXE50_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory protein FdhE"
                     /protein_id="HDL5622976.1"
                     /translation="MSIKILPQDDIKQAASSFQQPELLFANPKNLYLRRAKRLRELAK
                     QNPFGEYMEFSANLVDIQLALLESQPIADYSQKITACVERTQGETPLNAQNFQRTDEW
                     RTLLLAIIEKFKPYANDTVLATIEVLEKAAKSELDTLADNLLNERYELVGADKAVFIW
                     AALSLYWVQLAQQLPRNSRAEIGHKHLCPVCNSAPVSSVIHFGEAQGLRYLHCSLCES
                     EWHVVRTKCTNCDETGKLDYWSLDTVEAAVKAESCGDCHSYLKVLYQDKDVNVEPVAD
                     DLATLFLDSEMEQKGLSRSGINPFLFQVE"
     gene            complement(5755..6141)
                     /locus_tag="PXE50_002105"
     CDS             complement(5755..6141)
                     /locus_tag="PXE50_002105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622977.1"
                     /translation="MLRNFMIMLHFIYGFAMKNAFSFFVISLFLTMNSISYASNPIPS
                     NKEKLNGVKKQQDKPKFRISERKVLKNKEKDEEVSNFSMEELRVGAQRPLDDSVIQYF
                     KSQCRYAFMSDREIIANRCEVKKIAD"
     gene            complement(6152..7522)
                     /gene="gorA"
                     /locus_tag="PXE50_002106"
     CDS             complement(6152..7522)
                     /gene="gorA"
                     /locus_tag="PXE50_002106"
                     /EC_number="1.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009499791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-disulfide reductase"
                     /protein_id="HDL5622978.1"
                     /translation="MAKHYDYIAIGGGSGGIASINRAASYGQKCAIIEAKHLGGTCVN
                     VGCVPKKVMFYGAQVAEAINHYAPDYGFDITVNNFDYAKLVESRQAYIGRIHTSYGNV
                     LAKNNVDVLNGFARFKDAKTLEVSYADGSVEEVTADHILIATGGRPTVPNVKGAEYGI
                     TSDGVFALDALPKSVAIVGAGYIAVELAGVFNSLGVNTHLFVRQHAPMRNQDPLIVDT
                     LLEVLAQDGIELHTQATPQEVVKNADGSLTLKLQDGRETSVESLVWAIGREPATDKIN
                     LEAAGVETNERGFIKVDKFQNTNVPNIYAVGDIIEGGIELTPVAVAAGRRLSERLFNN
                     KPNEHLDYSLVPTVVFSHPPIGTVGLSEPKAIEQYGAENVKVYKSSFTAMYTAVTQHR
                     QPCRMKLVCVGEGEKVVGLHGIGFGVDEMIQGFAVAIKMGATKADFDNTVAIHPTGSE
                     EFVTMR"
     gene            complement(7599..8123)
                     /locus_tag="PXE50_002107"
     CDS             complement(7599..8123)
                     /locus_tag="PXE50_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00645 family protein"
                     /protein_id="HDL5622979.1"
                     /translation="MHSELNTRANILGKIIFASRWLQLPIYLGLIVVQGIYAYKFIKS
                     LYHLVINLNEMDSNTVMLAVLNLIDVVMIANLLVMVIVGGYETFVSRLKVDDHPDQPE
                     WLDHVNATILKVKLSMAIISISSIHLLQTFINASNLDEKQMMWQVVIHLAFIVSALAM
                     AYIDKMLNSGHMKH"
     gene            complement(8218..8856)
                     /locus_tag="PXE50_002108"
     CDS             complement(8218..8856)
                     /locus_tag="PXE50_002108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HDL5622980.1"
                     /translation="MELKHTIEQRKTIKAFNSTIKISRTELEEMVALSQLAPSKANLQ
                     PWRFVIIDVEILKAALSKNVAFNGPPCETASAIVVILADLQYEKLLGAIVDQSVETGC
                     LHKEFRERKFDFLLNLHNQATQAEIRDQVLIDTSLAAMQLMLIAKDKGYDTHAIGVFE
                     RPAVLKLLNIDAERYLPVMLLAIGKAANPALPSCRLPLEYTVSWNDGQGFKI"
BASE COUNT         2709 a         1926 c         1785 g         2472 t
ORIGIN      
        1 taattttgat caaattttgt tttatttctc acattatgtg atttggagtg attatgcaga
       61 tctcaagacg taagttcttc aaggtctgtg caggtggtat ggcgggaact tctgctgcaa
      121 tgttgggttt tgctccagca acagcattag ctgcaccgcg tgagtataag ctcttaagag
      181 caaaagaaac tcgacaaacc tgtacttact gcgcggtagg ctgtggcatg attatgtaca
      241 gcttaggcgg cgaagcaatg aacagcaaag gaaagttaat tcatattgag ggtgattctg
      301 accatccagt aagccgtggg gcgttatgtc cgaaaggtgc aggggcgttg gactatgtta
      361 atagtgaccg ccgtgtgcat tatccggaag tgcgtgaagc cggttcaagt gagtggaaac
      421 gcatttcttg gcacgaggca attgaacgta ttgcccgcca tatgaaaaat gaccgtgatg
      481 agaacttcgt cacccacaat gaagcagggc tggaagtaaa ccgttggatg acggcaggtt
      541 tcttggcagg ctcggcgtgt agtaacgaaa ccggtatcgt cacccagaag tttatccgct
      601 ctctcggtat gatttttacc gacaaccaag cgagtatctg acacggacca acggtagcaa
      661 gtcttgctcc atcatttggt cgcggtgcga tgaccaacca ctgggttgat attaaaaact
      721 ccgatttagt gatcgttatg ggcggtaacg cagccgaagc tcaccctgtg ggtttccgtt
      781 gggcagttga agcgaaaaaa cagaacggtg cgaagttaat ggtggtagat ccacgcttta
      841 accgtagtgc tgcggtggcg gatatttata taccattgcg tccgggtacg gacattgcgt
      901 tcttgttagg tgcggtaaac tacctgctta aaaacgacaa aattcaacac gagtatgtga
      961 agcattacac caatgccaca ttcttactca acgaagggtt taaattcgaa gacgggcttt
     1021 tcaccggcta cgatgaagcc actcgtacct ataaagacaa atccacttgg gcttatcagt
     1081 tagatgaaca gggtcagccg aaacgggata tgacaatgca agatccacgt tgtgtgatca
     1141 atatgctcaa agaccacgtt tcccgctata cgcctgaaat ggtagaacgc attaccggta
     1201 cgccacaaaa agatttcctg attttctgtg aagagattgc gaaaacctca gcgccggata
     1261 aagccgccac cttcctctat gccttaggtt ggacacaaca caccgtgggc gcacaaaaca
     1321 ttcgctcaat ggcgatcatt cagttgctgt gcggtaacat tggtgtctcc ggcggtgggg
     1381 taaacgcact gcgtggtcac tctaatgtac aagggattac cgacctaggc ttgttcccac
     1441 atatgttgcc gggctatatc cgcctgccaa ccgaagcgga cgcaacctta gaaagctact
     1501 taaatgcgat tgcaccgaaa accttagtgg cagggcaagt aaactacggg caaaacaacc
     1561 cgaaattcgc tgtgagtatg ctcaaaacct tctacggcga taaggcaacc aaagagaacg
     1621 agttcggcta tcactattta ccgaaatacc cgaaaggcgg tacagatcac ttccgcttta
     1681 tcgaacagat gtatcaaggc aaagtgaacg gctatttctg ccaaggtatg aacccgattg
     1741 cctcttaccc taactcgcag aagttaatta aagcgttgag caatttgaaa tatttagtca
     1801 tttttgaccc gcttattacc gatacttccg agttctggaa aaatcacggt gagttcaaca
     1861 atgtgaaccc gtctgaaatt caaaccgaag tgttccgctt gccgaccact tgctttgcgg
     1921 aagaagatgg ttcaattgcg aactccggtc gctggttaca atggcactgg aaagcagcag
     1981 acgcaccaca cgaggcaaaa ccggacgtgg atattctgtc tgaaatccgt gccgaactga
     2041 tccaccttta tcataaagaa ggcggaaaag caccgcttga accgttagaa gcgatgacgt
     2101 ggaactatat gaacccgtta gaaccgaagc cggaagagat cgccaaagag aacaacggtt
     2161 atgcattgga agatctgaaa gatgcagacg gcaacatcat cgtgaaaaaa ggcgaactat
     2221 tatccagctt tacacaaatg cgtgatgacg gtacaacctc cggtggttgt tggatctact
     2281 gcggtcaatg gactccgaaa ggtaaccaaa tggcgaaccg tgataactcc gacccatcag
     2341 gcttaggtaa caccttaggc tgggcattct cgtggccggt aaaccgccgt attctataca
     2401 accgtgcatc ggcagattta agcggtaaac cgtggaaccc gaaacgccag ctagttaaat
     2461 ggaacggtaa aaactggaac tatgtggacg ttgccgatta cggtacagca ccaccaaata
     2521 gccctgtgac accatttatt atgcaaccgg aaggggtatc cggcttgttc gtgcgtgaac
     2581 gtatgcaaga cggtccattc cctgagcatt atgaaccgtt tgaaacgcca atcggcacga
     2641 acccgttaca cccgaatgta atcagcagtc cggtggcacg cattctgccg agcgataaag
     2701 aggatttagg caccagcgat gagttcccat atgtcggtac aacttaccgc ttaaccgaac
     2761 acttccacta ctggacgaaa aatgccctga ttaacgtcat tgctcaaccg gagcaattcg
     2821 tggaaatcgg cgagaaactt gccgaagaga aaggcattaa aaatggcgac aaagtacgtg
     2881 tttggtctaa acgtggcgaa attaaagccg ttgccgtggt gactaaacgt atccgttcat
     2941 tggtctctga cggcaaacca atccacacta tcggtgtgcc gatccactgg ggctttgcgg
     3001 ctacaaccgg tgcgaaaaaa ggctattttg ccaataactt aaccgtgcga acaggtgaac
     3061 caaactcaaa tacacctgaa tcgaaatgta tgttattaaa cattgagaaa attgtggggg
     3121 cttaacaatg agtacagttc aaactcaaaa cattattaaa atctccgcaa cctcggcgct
     3181 gacaccggcg ccgcaggctc gttcgcacca agtggaagta gcgaaactga tcgatgtcac
     3241 cacttgtatc ggctgtaaag cctgtcaagt gggctgttca gaatggaatg acattcgctc
     3301 cgatgtaaat gcaaactgtg tcggcgtgta cgacaaccct gcggatctaa atgcgaaagc
     3361 gtggacagta atgcgcttta acgaagtaga agaaaacgac cgtttagaat ggttgatccg
     3421 taaagacggc tgtatgcact gtgccgagcc gggttgcttg aaatcttgcc cgtcaccggg
     3481 tgcgattatc caatacgcca acggtattgt tgatttccaa tccgacaaat gtatcggttg
     3541 tggctactgt atcgcaggtt gtccgttcaa cattcctcgt atgaatccgg acgataaccg
     3601 tgtttacaaa tgcaccctgt gtgtggatcg tgtcaatgtt ggtcaagaac cggcttgcgt
     3661 gaaaacctgc ccgaccggtg caatccgctt cggtagcaaa gaagagatga agttctatgc
     3721 agaacaacgc attgctgatc tgaaatctcg tggctatgaa aatgccggct tgtacgaccc
     3781 tgaaggcgtt ggcggtacgc acgtaatgta tgtattacat catgccgaca aaccggagct
     3841 ttattcaggc ttaccgaaag atccgaagat tgataccaca gtaaccttat ggaaagacgt
     3901 tttaaaacct gtggcggcag tagcgttggg tggtttagct ttagcagaag ttgcacacta
     3961 tattaccgtt gggccaaacg ttgaggaaga tcttgaagaa caccaccata gcgaaaatgc
     4021 agaaggaggc aaacatgagt aagaaatttg aaatcacgaa cgataccaaa atcgttcgtc
     4081 ataagccctt agctcgtgtt agccactggt tcttagtaat ctcttttttt atgacgatgt
     4141 ttaccggtgt tgccttcttc ttccctgact ttgcttggct taccgagatt ttaggtactc
     4201 cacagattgc ccgtgcagtc cacccattta ccgggattat aatgtttatt gcatttatta
     4261 ttatggcgtt aatatattgg caccataata tccctgagaa aaatgatatt cgttgggcaa
     4321 aaggcattgt tgaagtacta aaaggtaatg agcataaggt ttccgataat ggaaaataca
     4381 atttgggtca aaaattactc ttttggactc ttattcttgc gatgttcact cttttagcca
     4441 cagggattat tatgtggaga caatttttct ctcactactt ctcgattcct atgctaagaa
     4501 ttgcaatttt acttcattca gcaagtgcat ttatgctatt taccggaatt ttagtacata
     4561 tgtatatggc attctgggta aaaggctcaa tcagaggtat ggttgagggt tgggttaccg
     4621 ttcgctgggc aaaaaaacac cacccaagat ggtaccgtga agaagtgcta cctgaattag
     4681 aaagacaagt agctgagcaa aataataaat aacctcaagt gcggtattat taccgcactt
     4741 ttattttatt ggtttaaaaa gaatattatg agtatcaaaa tactacctca agatgatatc
     4801 aaacaagcag ctagttcatt tcagcaaccc gagctcttat ttgctaatcc caaaaatctg
     4861 tatttacgcc gcgctaagcg gctacgtgaa ttagccaagc aaaacccatt cggtgaatat
     4921 atggagtttt ctgctaacct cgtggacatt caattagcat tacttgaaag ccagccaatt
     4981 gcagattatt ctcaaaaaat aaccgcttgt gtagagcgca cgcaaggaga aacaccgcta
     5041 aatgcacaga attttcagcg tactgatgaa tggcggacac tactcttagc cattattgag
     5101 aaattcaagc cttatgcaaa tgatactgtt cttgcaacaa ttgaagtatt ggaaaaggca
     5161 gctaagtcag agctagacac acttgctgat aatttgctaa atgaacgata cgaacttgtg
     5221 ggcgcagata aagctgtctt tatttgggct gctctctcac tttactgggt acaattagct
     5281 caacaattac cacgtaattc tcgtgcagaa ataggccata aacatttatg tccggtatgt
     5341 aactcagcac ctgtaagcag tgtgattcat ttcggtgaag ctcaagggtt acgttatcta
     5401 cactgttctt tatgtgaaag tgaatggcat gtagtacgta caaagtgtac aaactgtgat
     5461 gaaaccggca aactggatta ttggagctta gatacagtag aagcagcagt taaagctgaa
     5521 agttgtggcg actgccattc ctacttaaaa gtactctatc aagataaaga cgtgaatgtg
     5581 gaacctgttg ctgatgattt agcaactcta ttcttagatt ccgagatgga acaaaaaggt
     5641 ctttcaagaa gtgggataaa tccattttta tttcaagtag agtaactcat ttacaacaaa
     5701 aacggagcat aacgctccgt tttttattac atttaactca tacactatac ttttttaatc
     5761 agctattttt ttaacttcac agcggttagc aataatctcc cgatctgaca taaatgcgta
     5821 tcggcattga gatttaaaat attgaatcac agaatcatca agaggtcgtt gtgctccaac
     5881 acgtaattcc tccatagaaa aattactaac ctcttcatct ttctctttat ttttcaatac
     5941 cttacgttca gatattctaa acttaggctt gtcttgctgt ttttttactc cgtttaattt
     6001 ttctttatta ctaggaatag gattacttgc ataactaata ctattcatcg taagaaaaag
     6061 agaaataaca aaaaagctaa aagcgttttt catagcaaac ccataaataa aatgtagcat
     6121 aatcataaaa ttacgtaaca ttttattaca tttagcgcat ggttacaaat tcttcagatc
     6181 ctgtcgggtg aatagccact gtgttgtcaa aatcagcttt cgttgcgccc attttaattg
     6241 caacagcaaa accttgaatc atttcatcaa caccaaaacc aataccatgt aacccaacca
     6301 ctttttcccc ttccccaaca caaactaatt tcattcggca aggttgacga tgttgtgtaa
     6361 ccgcagtata cattgcagta aatgaagatt tatacacttt cacattttct gccccatatt
     6421 gctcaatcgc ttttggctca cttaaaccaa cagtacctat tggtgggtgg ctaaaaacga
     6481 ctgtcggtac taagctataa tccaaatgtt catttggttt attattgaac aaccgttccg
     6541 atagcctgcg accagctgca actgcaacag gagttaattc aataccacct tcaataatat
     6601 caccaacagc atagatattt ggcacattag tattttggaa tttatccact ttgataaaac
     6661 cacgctcgtt ggtttcaaca ccagcagcct ctaaattaat cttatctgtc gctggctcac
     6721 gaccaatagc ccacaccaag ctttcaacag aggtttcacg accatcttgc aattttaatg
     6781 tcaatgaacc atctgcattt ttaactactt cttgaggagt cgcttgtgta tgtaattcga
     6841 tcccatcttg agctaatact tcaagcaatg tatccactat taatgggtct tgattacgca
     6901 ttggagcatg ttgacgaaca aaaagatggg tatttactcc taaactatta aatactccag
     6961 ctaattcaac tgcaatatac cctgccccca caattgctac ggacttcggt aaagcatcta
     7021 gtgcaaatac accatcagaa gtgataccgt attcagcccc tttcacattg ggtacagttg
     7081 gacgaccacc tgttgcaatc agaatatggt ctgctgtgac ctcctcaacg gaaccatcag
     7141 cataactcac ttctaatgtt ttagcatctt taaagcgagc aaaaccattt aaaacatcaa
     7201 cattattttt tgccagcaca ttaccatatg aggtatgaat gcgcccaata taggcctggc
     7261 gactctcaac taatttggca taatcaaaat tatttaccgt aatgtcaaaa ccataatcag
     7321 gggcgtaatg gttaatcgct tctgcaactt gtgcaccata gaacatcact tttttgggta
     7381 cacatcccac gttcacacaa gtgccaccta aatgttttgc ttcaataatg gcacattttt
     7441 gcccatagct tgctgctcga ttaattgaag caataccacc actaccaccg ccgatagcaa
     7501 tataatcata atgtttagcc ataagctatt cctcgatcta taaaaacaaa agcaacttat
     7561 tcgttaagcg ctttatcaaa ttaaatttgc atagaagact aatgtttcat atgccctgaa
     7621 ttcaacattt tatcaatata cgccatcgct aatgctgaaa caataaaggc taagtgaata
     7681 actacttgcc acatcatttg cttttcatca agatttgaag cattgataaa tgtttgtaat
     7741 aaatgaatag aagaaatact gataattgcc attgaaagtt ttactttcaa aatagtcgca
     7801 ttaacgtgat ccaaccattc tggctgatca gggtgatcat ctacttttaa tctagagaca
     7861 aaagtttcat atcctccaac aataaccata accaaaagat ttgcaatcat caccacatct
     7921 attaaattta ataccgctaa cataacagta tttgaatcca tttcatttaa attgataact
     7981 agatgataca atgatttaat aaacttatac gcatatatcc cctgtacaac aatcaaccct
     8041 aaataaatag gtaattgtaa ccaacgactt gcgaaaataa ttttacctaa aatatttgcc
     8101 ctagtattta attccgaatg catatatctc ctataaatag caatacaaaa ataaattaca
     8161 acgctcaaat tttaacaatt ttttgccaaa aaattaagat atttaaccgc ttgcacctta
     8221 tattttaaaa ccttgtccat cgttccaaga aaccgtatat tctagaggta aacggcaact
     8281 tggcaacgct gggtttgctg ctttaccgat agctagtagc ataacaggca aataacgttc
     8341 tgcatctata ttcaataatt ttaatacagc agggcgctca aacacgccta tcgcatgagt
     8401 atcatagccc ttatctttgg caattagcat taattgcatt gccgccaaac tagtatcaat
     8461 taatacctga tctctaattt ctgcttgagt tgcttggtta tgaagattta gtaaaaaatc
     8521 aaatttacgt tcacgaaact ctttatgcaa acacccagtt tctaccgatt gatcaacaat
     8581 tgcgcctaat aatttttcat attgcaaatc tgccaatatc accacaatag cagacgctgt
     8641 ttcacaaggt gggccattaa aggcaacatt ttttgataat gctgctttaa gaatttcaac
     8701 atcaataatg acaaaacgcc aaggttgcag atttgctttt gagggagcaa gctgggataa
     8761 agcgaccatt tcttctaatt cagttctact aatcttaatt gttgaattaa aagctttgat
     8821 agttttacgc tgttcaatcg tatgtttcaa ttccatctct tttctcctat ctctcaaaca
     8881 attgagatag tc
//
LOCUS       DANLZQ010000101         8872 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.101, whole genome shotgun sequence.
ACCESSION   DANLZQ010000101 DANLZQ010000000
VERSION     DANLZQ010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8872)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8872)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8872
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.101"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..637
                     /locus_tag="PXE50_002109"
     CDS             <1..637
                     /locus_tag="PXE50_002109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HDL5622981.1"
                     /translation="AGSSSFPHAILESNRIDKGNRKFIAVQYPEEIDIKSKNGKVAKQ
                     FCQRKNLPLYITEISKERIRRAGKQILQNNPENRPLDVGFKVFKLTESHFKQWQSPTS
                     ENLADQLEMFIDPVSEKADTQAVLYELLLRLGLKLTAKVRLENKVFWVEENGLIFALL
                     LNAADEEIIQTVIAQQPKKVIALDRLFNGNDARKKNTELQMQDAGITFFVI"
     gene            647..3283
                     /locus_tag="PXE50_002110"
     CDS             647..3283
                     /locus_tag="PXE50_002110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HDL5622982.1"
                     /translation="MELQFETLEYQLQAVNATVNLFVGQPNAATEFSLKAQNDMRFVP
                     NLGLQISDEQLQQNLANLQNRQKIDRTLLVEQGKNFTVEMETGTGKTYVYLRTIFELN
                     RQYGWQKFVIVVPSVAIREGVLHTLETTKSHFNTVFDNPSVNQKFEYKSNQTSRLKSF
                     ASANHIEILVMNIDAFTKESNVINTVNESGDAPIFYIQQANPIVIIDEPQNMETEIRR
                     NAIESLSPLFTLRYSATHKNAYNPIFSLNPVQAYEMGLVKQIEVDSVLAENEVNGAYL
                     SLKEIKTGAKSWSAKIEILFNDKKAMKKKVISVKPNQDLYELSNQNEMYRSGFILSGM
                     DTDSQMVSFSNGTQIFQGAEHSQLKEDVQKMQIRRTIGEHLQKEKKLRPLGIKVLSLF
                     FIDKVDNYRPSAQSPTGGKFAKWFEEIYLELAKEEPQGVHNGYFSQDKKGVAKDTNGT
                     TQADNETYQLIMRDKEKLLSLENPLRFIFSHSALKEGWDNPNVFQICTLNDTASEMKK
                     RQEIGRGLRLPVNQQGLRIYDRHLNTLTIIANESYEQFAATLQREIEEDCGVQFAKSN
                     VKKREDKKAVRYRKDFSLHPEFAAIWERIKHQTTYRVDFSNAELIESAVEKIRKMPDI
                     EATKIKHSKVKLEMNETGISTNYRSSNETAVNTQWAIPDLLSEIQKKTGLTRATLCKI
                     LQKSDRLQEVFRNPQRFIDLIAEKINLALQQIMTDGVEYHKIAGKTYEMTLFGDFDFY
                     LNQYTFEVQDKTKTIYEDYIALDSQTENIFARHCESSEQVEFYFKLPKRFKIPTPLGS
                     YNPDWAVVFKGENKIYLVAETKNTGKGIQAGVDEEKLDESERMKIDYARKHFKGLQRD
                     YKDLDYRVVQKVEELSAEYCKI"
     gene            3415..5847
                     /gene="gyrB"
                     /locus_tag="PXE50_002111"
     CDS             3415..5847
                     /gene="gyrB"
                     /locus_tag="PXE50_002111"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HDL5622983.1"
                     /translation="MSEQTQATSYDSSSIKVLRGLDAVRKRPGMYIGDTDDGTGLHHM
                     VFEVVDNAIDEALAGHCKDIIVTIHSDNSVSVQDDGRGIPVGIHPEEGVSAAEVIMTV
                     LHAGGKFDDNSYKVSGGLHGVGVSVVNALSSKLQLTIRREGHVHEQFYSLGEPDAPLA
                     IIGNTEKTGTSVRFWPSLDIFKNKTEFEYKILSKRLRELSFLNSGVSIKLIDERDGKE
                     EHFKYEGGIKAYVEYLNEGKTHIHNTPFYLTTEKDGIGVEISLQWNDSYNENVYCFTN
                     NIPQRDGGTHLAGFRGALTRALKNYMDNSGVLKKADANIDASGDDAREGLVAVISVKV
                     PDPKFSSQTKDKLVSSEVRGAVESSMNEALSDYLAENPDDAKNIVTKIIDAARAREAA
                     RKAREMTRRKGALDLGGLPGKLADCQEKDPALSELYLVEGDSAGGSAKQGRDRKNQAI
                     LPLKGKILNVEKARFDKMLSSQEVATLITALGTGIGRDDYNLEKLRYHKIIIMTDADV
                     DGAHIRTLLLTFFYRQMPELIENGYIYIAQPPLYKVKKGKQERYIQDNDEMSQYEIDI
                     ALEGAGLYVSEDAPALSGVALENLIAQYNGVQKLIERLSRRYPTLLLNELIYSKPLSV
                     EFAKNQANMTAWSEQFVATLMAKEVGGSFYRINTLFNEERQIYEPEIIVTTHGMDSTY
                     RLDYNFINGNEYARIVALGNELNDLLSDSAYVVRGERRQEISSFAEALDWLVKESRKG
                     LTIQRYKGLGEMNPEQLWETTMDPVARKMLQVNITDAIAADKLFSTLMGDEVEPRRDF
                     IETNALYAQLDI"
     gene            complement(5900..6862)
                     /gene="cmoB"
                     /locus_tag="PXE50_002112"
     CDS             complement(5900..6862)
                     /gene="cmoB"
                     /locus_tag="PXE50_002112"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005707797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic
                     acid(34) synthase CmoB"
                     /protein_id="HDL5622984.1"
                     /translation="MIDFRPFYQQIATTDLSAWLETLPLQLKQWEKTTHADYAKWAKV
                     ADFLPNSTACINLKDKVESISSKPLSEGEVKQITHHLKQLMPWRKGPYHLHGIHIDTE
                     WRSDFKWDRVLPHLAPLKDRTILDVGCGSGYHMWRMVGEGAKMVVGIDPTELFLCQFE
                     AVRKLLGNDRRANLIPLGIEQMQPLAAFDTVFSMGVLYHRKSPLDHLSQLKAQLVRGG
                     ELVLETLVIDGDINDVLVPADRYAKMKNIYFIPSVAALINWLEKVGFKNVRCVDEAIT
                     TLEEQRKTDWLENESLVDFLDPNDHSKTIEGYPAPKRAVILANA"
     gene            complement(6959..8722)
                     /locus_tag="PXE50_002113"
     CDS             complement(6959..8722)
                     /locus_tag="PXE50_002113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     accessory protein YcaO"
                     /protein_id="HDL5622985.1"
                     /translation="MSEQTFITGKDAALEDSIATFQHKLKTLGFNIEEASWLNPVPNV
                     WSVHIRDADCPQCFSNGKGASKKAALASALGEYFERLSTNYFWADFYLGQEIANSEFV
                     HYPTEKWFPIDDEAIPPMEMMDEFLWEYFDPNGEITPELLVDLQSGNYDRGIVTLPYV
                     RQSDNETVYIPQSIIGNLFVSNGMSAGNTKNEARVQGLSEVFERFVKNRIITEAISLP
                     EIPQSVIDGYPTIKASIEKLEQEDFPILCYDASLGGEFPVICVILLNPNNGTCFASFG
                     AHPNFQVAFERTVTELLQGRSLKDLDVFAPPSFNNEDVADHANLETHFIDSSGLISWD
                     LFKRDADYPFVHWDFSGTTEQEFNNMMAIFNKHNQPVYIMDYEHLGVYACRILAPGMS
                     NIYPSDDLVYANNNMGMDWREILLDLPHFHHDAETYQELLDELDEQSIDDLTRVREFI
                     GVVAEKGSAMQTLRIGELKSMLHLALGNLEQASDWANWTANMNASVFSAERNNYYRCL
                     IQSIELFLDEERDSEQYRMVFEKMYGKQAVEAAWGAIQGGNPFHGLTASDESLENMTA
                     HQKLLNAYRKVQKAKVNPIAR"
BASE COUNT         2819 a         1713 c         1892 g         2448 t
ORIGIN      
        1 tgctggcagt tcatcatttc cacacgcaat attggaaagt aatagaattg ataagggtaa
       61 tagaaaattt attgcggttc aatatcctga agaaattgat atcaagagta agaatggaaa
      121 agtagcaaag caattttgcc aaagaaaaaa tttaccacta tatataactg aaatttcaaa
      181 agaacgtatt cgccgtgccg gaaagcagat tttgcaaaat aaccccgaaa accgaccgct
      241 tgatgtaggt tttaaagtct tcaaactgac agaaagccat tttaaacaat ggcaatcgcc
      301 cacatctgaa aatttagccg atcaacttga aatgtttatt gatcctgtta gtgaaaaagc
      361 ggatacgcaa gccgttttat atgagctttt attgcgttta gggttaaaac tcacggcaaa
      421 agtgcggttg gaaaataagg tgttttgggt ggaagaaaac gggctgattt tcgccttgct
      481 gttaaatgca gccgacgaag aaattattca aactgttatc gctcaacaac cgaaaaaagt
      541 catcgcttta gaccgtttat tcaacggcaa tgatgcccgg aagaaaaaca ccgaattgca
      601 aatgcaagat gccggcatta cgttttttgt gatttaagga gaaaaaatgg aactccaatt
      661 tgaaacctta gagtatcaat tacaagccgt taatgccaca gtaaatttgt ttgtcggaca
      721 gccgaatgcc gcaactgaat tttcactcaa agcccaaaat gatatgcggt ttgtgccgaa
      781 tttaggcttg cagattagtg atgagcagtt acaacagaat ttggctaatc tgcaaaacag
      841 gcaaaaaatc gaccgcactt tgcttgtcga acagggaaaa aattttaccg tggaaatgga
      901 aactggtaca gggaaaacct atgtctattt acgcacgatt tttgaattaa accgtcaata
      961 cggctggcaa aaatttgtga ttgtcgtgcc gagtgtggca attcgtgagg gagtgttgca
     1021 tacgttggaa actacaaaaa gccattttaa tacggtattt gataacccga gcgtcaatca
     1081 aaaatttgaa tataaaagta accaaacttc acgcttaaaa tcctttgcta gtgctaatca
     1141 tattgaaatt ttagtgatga atattgatgc tttcaccaaa gaaagtaacg tgattaatac
     1201 cgtgaatgaa agcggtgatg ctccgatttt ctatattcaa caggcgaatc cgattgtgat
     1261 tattgatgaa ccgcaaaata tggaaacgga gattcgccgt aatgcgattg agagtttaag
     1321 tccgcttttc actttgcgtt attctgccac ccataaaaat gcgtataacc cgatttttag
     1381 cctcaatccg gtgcaagcct atgaaatggg attagttaaa caaattgagg tagatagcgt
     1441 attggcggaa aatgaggtaa atggagctta tctttccctc aaagagatta aaacaggggc
     1501 aaaaagctgg tcggcaaaaa tcgaaatttt atttaacgat aaaaaagcga tgaaaaagaa
     1561 agtgattagc gtgaaaccga atcaggattt gtatgagctt tccaaccaaa atgaaatgta
     1621 tcgttcaggg tttatattaa gcggaatgga taccgatagc caaatggtta gcttctccaa
     1681 cggcacacaa atttttcaag gggcggaaca ttcccaactt aaagaagatg tgcaaaaaat
     1741 gcagattcgc cgcactattg gcgagcattt gcaaaaagaa aagaaattac gaccgcttgg
     1801 gatcaaggtg ttgtctttgt tctttatcga taaagtggat aattatcgcc cttctgcaca
     1861 aagccctacg gggggaaaat ttgcaaaatg gtttgaggaa atttatttgg agctagccaa
     1921 agaagagcct caaggcgtgc ataacggtta tttctcacag gataaaaaag gcgtagcaaa
     1981 agatactaat ggcacaacgc aagcggataa cgagacttat caactgatta tgcgggataa
     2041 agaaaaattg ctttcgctgg agaatccgtt acggtttatt ttctcgcatt ctgccttaaa
     2101 agaaggatgg gataatccga atgtgtttca aatttgtact ttaaacgata ctgcaagcga
     2161 aatgaaaaaa cgccaagaga ttgggcgggg cttgcgtttg cctgtgaatc aacaaggatt
     2221 gcggatttat gatcgtcatc taaatacgct gacaattatc gcaaatgaaa gttacgaaca
     2281 atttgccgcc acattacagc gtgaaattga ggaagattgt ggtgtacagt ttgccaaaag
     2341 caatgttaaa aaacgggaag ataaaaaagc cgttcgctac cgtaaagatt tcagcttaca
     2401 tccggaattt gcggcaattt gggaacggat taaacaccaa accacttatc gggtagattt
     2461 cagtaatgcg gaattgattg aaagtgcggt ggaaaaaatc cgcaaaatgc ccgatatcga
     2521 ggcgacaaaa attaagcatt ccaaagtgaa attggaaatg aatgaaacag ggatttcaac
     2581 taattatcgc tcatctaatg aaacagcggt aaatacacaa tgggcgatac ctgatttatt
     2641 gagtgagatt caaaagaaaa ccgggctgac gcgtgcgacc ctttgcaaaa ttttacaaaa
     2701 atccgaccgc ttgcaagaag tcttccgcaa tcctcaacgc tttattgatt taattgcaga
     2761 gaaaatcaac cttgctttac aacaaattat gacagacggg gtggaatatc acaaaattgc
     2821 cggaaaaacc tatgaaatga cgttattcgg cgattttgat ttttacctca atcaatatac
     2881 ttttgaagtt caagataaaa caaaaacgat ttatgaagac tatattgcac tggattccca
     2941 aacagaaaat atcttcgccc gacattgtga atctagtgag caagtggagt tttattttaa
     3001 attacccaaa cgttttaaaa ttccaacgcc attaggcagc tataatcccg attgggcagt
     3061 tgtgtttaag ggagaaaata aaatttactt ggttgccgaa acgaaaaata caggcaaagg
     3121 tattcaagca ggagtagatg aagaaaaatt agatgaaagt gaacgaatga aaatcgacta
     3181 tgcccgtaag catttcaaag gcttacagag agattataag gatttggatt atagggttgt
     3241 acagaaagtg gaggagctgt ctgcggagta ttgtaaaatt taatctgtgg tcttgtagaa
     3301 ttgagataga ctgcaatttc aactaaaatt taaccgcttg ttttgcgata cttttacgca
     3361 tttttctgct ataatcggca caattttttc gatttcaaat tagtaggaat aagaatgtct
     3421 gaacaaactc aagcaacaag ttatgattct tccagtatta aggtgttacg cggcttagat
     3481 gcggtgcgta aacgcccggg aatgtatatc ggcgataccg atgacggtac gggcttacac
     3541 catatggtgt ttgaggtggt tgataatgcg attgacgaag cattagccgg gcattgtaaa
     3601 gacattattg tcacaattca ttccgataat tcggtttctg tgcaagatga cggtcgtgga
     3661 attccggtgg ggattcaccc ggaagaaggc gtttcggcag cagaagtcat tatgactgtt
     3721 cttcacgcag gcggtaaatt tgacgataac tcctataagg tttccggcgg tttgcacggt
     3781 gtgggcgtat cggtggtgaa tgcactttcc tctaaattac aactcactat tcgccgtgaa
     3841 ggacacgttc acgagcaatt ctatagctta ggtgagcctg atgcaccttt agcgattatc
     3901 ggcaataccg aaaaaacggg gacgtcggtt cgtttctggc caagtttgga tattttcaaa
     3961 aataaaaccg aatttgaata taaaattctg tctaaacgct tgcgtgaact atcatttttg
     4021 aattcaggcg tttcgattaa attaattgat gaacgagacg gcaaagaaga gcattttaaa
     4081 tatgagggcg gtattaaagc ctatgttgag tatttaaacg aaggcaaaac tcatattcac
     4141 aatacgccat tctatttgac cactgagaaa gacggcattg gcgtggaaat ttccctacag
     4201 tggaatgaca gttacaacga aaatgtgtac tgctttacca ataatattcc acagcgtgat
     4261 ggcggtacgc acttagccgg tttccgtggg gcattaactc gtgcgttgaa aaactatatg
     4321 gataacagcg gggtattgaa aaaagccgat gcgaacattg atgcctcagg tgatgatgcc
     4381 cgtgaaggtt tagtagcggt gatttcggtg aaagtgccgg atccgaaatt ctcctcacaa
     4441 accaaagata aattggtgtc gtcagaagtg cgtggagcag tggaaagctc aatgaatgag
     4501 gctttatccg actatttagc cgaaaatccg gacgatgcaa aaaatatcgt taccaaaatt
     4561 attgatgcag cccgtgcaag agaagcagct cgtaaagccc gtgaaatgac ccgccgtaaa
     4621 ggggcgttag atttaggcgg cttaccgggt aaattagctg attgtcagga aaaagatccg
     4681 gcgttatcgg agctttactt ggtggagggt gactctgccg gtggctcggc aaaacaaggg
     4741 cgtgaccgta aaaaccaagc gattttgccg ttaaaaggga aaattctgaa cgtggaaaaa
     4801 gcccgctttg ataaaatgct ttcttcacaa gaagtagcaa ccttgattac cgctttaggc
     4861 acaggcatcg ggcgtgatga ttataatttg gaaaaattac gttaccacaa aatcattatt
     4921 atgaccgatg cggacgtgga tggtgcacat attcgtacgc ttttattaac tttcttctac
     4981 cgtcaaatgc cggagctgat tgaaaacggc tatatttata ttgcacagcc accgctttat
     5041 aaagtgaaaa aaggcaagca agagcgttat attcaagata acgatgaaat gtcgcaatat
     5101 gaaattgata ttgcattaga aggtgcaggc ttatatgtga gtgaagatgc tccagcgtta
     5161 agtggcgtag cgttagagaa cttaattgcc caatataacg gcgtacaaaa attaattgaa
     5221 cgtttaagcc gtcgttaccc aacattatta cttaacgaat taatttattc aaaaccgctt
     5281 tcggtggaat ttgcaaaaaa tcaagcaaat atgaccgctt ggagcgagca atttgtcgct
     5341 acattgatgg caaaagaggt gggcggcagt ttctaccgta ttaatacctt gttcaatgaa
     5401 gaacgccaaa tttatgagcc ggaaattatt gtgactacac acggtatgga cagtacctat
     5461 cgtttagatt acaactttat caacggtaat gaatacgctc gcattgtggc attaggcaac
     5521 gagctgaacg atttactatc tgattcagcc tatgtggtgc gtggtgaacg tcgccaagaa
     5581 atcagcagtt ttgctgaagc cttagattgg ttggtgaaag aatctcgtaa aggcttaact
     5641 attcaacgtt ataaagggtt aggtgagatg aatccggaac aattatggga aaccacgatg
     5701 gatccggtgg ctcgtaaaat gctacaggtc aatattaccg atgcgattgc ggcagataaa
     5761 ctcttcagta cgctgatggg cgatgaagtt gaaccacgcc gagatttcat tgaaactaac
     5821 gctttgtatg ctcagttaga tatttagtta aaaaatccgc atttgacatg cggatttttt
     5881 attctcttaa actagcattt taagcattcg ctaaaatcac cgcccgcttc ggagcagggt
     5941 agccttcaat ggttttgcta tgatcgtttg gatctaaaaa atccactaaa ctttcatttt
     6001 ccaaccaatc ggtttttcgc tgctcttcta gtgtagtgat tgcctcatca acacaacgca
     6061 catttttaaa gccgactttt tccagccaat taatgagtgc agcaacagaa ggaataaaat
     6121 agatattttt cattttcgca tagcgatcag ccggcactaa aacatcatta atatcgccat
     6181 caatcaccag cgtttctaac accaattcac cgcctctgac taattgggct ttgagttgag
     6241 aaagatgatc aagcggtgat ttgcgatgat aaagcacccc cattgaaaac acggtatcaa
     6301 aagcagcaag cggttgcatt tgctcaatac caagtggaat cagattagcc cgtctatcat
     6361 tccctaagag tttccgcact gcctcaaatt ggcacaggaa cagctcggtc gggtcaatac
     6421 caactaccat ttttgcccct tcgcctacca ttcgccacat atgataaccg ctaccgcagc
     6481 cgacatctaa aatggtgcgg tcttttaacg gtgcaagatg cggaagcaca cgatcccatt
     6541 taaaatcgga acgccattcg gtatcaatat gaatcccgtg tagatgataa gggcctttac
     6601 gccacggcat tagttgcttt aaatggtggg taatttgctt gacttccccc tcagataaag
     6661 gcttgcttga aatagactca accttgtctt ttagattgat acaagcggtc gaatttggta
     6721 aaaaatctgc aacttttgcc cacttggcat agtcagcgtg ggtggtcttt tcccattgtt
     6781 tgagttgtaa gggtaaggtt tctaaccaag cagaaaggtc ggttgtggca atttgttgat
     6841 aaaaaggacg aaagtcaatc attttgaaat ttatgtctag gggagagacc tatgccctcc
     6901 cgaaaggtag taaatagaaa ggacaggcac agaacctacc cctacgaaaa atataaaatt
     6961 atctcgcaat cggatttact ttcgcttttt gcactttgcg ataagcgttc agtaatttct
     7021 gatgtgcagt catattttca agcgattcgt ccgatgcagt taaaccgtgg aacgggttac
     7081 cgccttggat tgcaccccaa gcagcttcaa ccgcttgttt accgtacatt ttctcaaaca
     7141 ccatacgata ttgttccgaa tcacgctctt catctaagaa caactcaatc gattggatta
     7201 agcagcggta ataattgtta cgttctgctg agaatacgct tgcattcata ttcgctgtcc
     7261 agtttgccca gtctgaggct tgctctaagt tacctaaagc taaatgcagc atcgatttaa
     7321 gctcaccgat acgcaatgtt tgcattgcag agcctttctc tgccaccacg ccaataaatt
     7381 cacgcacacg ggttaaatca tcaatgcttt gctcatctaa ttcatcaagc agttcttggt
     7441 aagtttcagc atcgtgatgg aaatgtggca aatctaacaa gatttcacgc caatccatac
     7501 ccatattgtt attggcatag accaaatcat cgcttggata gatattcgac atacccggtg
     7561 caagaatacg gcaagcgtac acacctaaat gctcataatc cataatatac acaggctgat
     7621 tatgcttgtt gaaaatcgcc atcatattat taaattcttg ctccgttgtg ccggagaagt
     7681 cccaatgcac gaacggataa tccgcatcac gtttgaaaag atcccacgaa attagaccgc
     7741 ttgaatcaat aaagtgtgtc tcaaggttcg catgatctgc tacatcttca ttattaaatg
     7801 aaggtggggc aaacacatct aaatccttta agctacggcc ttgtaataac tcggttacgg
     7861 tacgttcaaa cgccacttgg aaattcgggt gtgcaccaaa agaggcaaaa caagtaccgt
     7921 tatttgggtt taacaagatc acacaaataa ctggaaattc tccgcctaat gaagcgtcat
     7981 agcataaaat cgggaagtct tcttgctcta gtttctcgat agaggctttg attgtcggat
     8041 aaccgtcaat cacactttgc ggaatttccg gcaagctgat tgcctcagta ataatacggt
     8101 ttttgacaaa acgctcgaac acttcggata agccctgcac tcgagcttca ttttttgtgt
     8161 tgcctgccga cataccgttt gaaacaaaca ggttgccgat aatgctttgc ggaatgtaaa
     8221 ccgtttcatt gtcagattgg cgaacgtaag gtagggtaac aattccacga tcataatttc
     8281 ctgattgtaa atcaaccaat aattccggcg tgatttcacc attcggatca aaatattccc
     8341 ataaaaactc gtccatcatc tccattggtg gaatggcttc atcatcaatc ggaaaccatt
     8401 tttcggttgg ataatgcaca aattcactat tagcaatctc ttgacctaaa taaaaatccg
     8461 cccagaaata gttggtagat aaacgctcaa aatactcacc taatgcagag gcaagagcgg
     8521 cttttttgct tgctccctta ccgttagaaa aacattgcgg acagtctgca tcacgaatat
     8581 gcaccgacca cacattcgga acaggattta accaagaggc ttcttcaata ttaaaaccta
     8641 aggtttttaa tttatgctga aaggtcgcaa tgctgtcttc aagtgcagca tctttaccgg
     8701 taataaaagt ttgttctgac atgataatac ctttaacttg tcgtaaaaat ggcaacattc
     8761 tagcaaaaat ccccatagat aagtaaattt tttgtgaaat ttctgctgaa agaacagatt
     8821 tcaaaactta gaaaaaatga ttacaagcgg tcaaatttta cttgaatttt gc
//
LOCUS       DANLZQ010000102         8831 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.102, whole genome shotgun sequence.
ACCESSION   DANLZQ010000102 DANLZQ010000000
VERSION     DANLZQ010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8831)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8831)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8831
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.102"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            106..4002
                     /gene="purL"
                     /locus_tag="PXE50_002114"
                     /gene_synonym="purI"
     CDS             106..4002
                     /gene="purL"
                     /locus_tag="PXE50_002114"
                     /gene_synonym="purI"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HDL5622986.1"
                     /translation="MTIQTFRGSPALSAFRIQQLLQKFQQNQLPVKSVYAEFLHFVAL
                     NRPLVADEENKIKELLHYGPTLEEDEPTGFCLIVTPRIGTISSWSSKATDIAHNCGLA
                     AVERIERGTAYYLEFSETPNESQLTTLKGLLHDRMMETVLDNESQAEQLFAQQEPKPF
                     TSVDILGGGRKALEEANINLGLALADDEIDYLVENFTQLGRNPNDIELYMFAQANSEH
                     CRHKIFNADWTIDGVKQEKSLFKMIKNTFEKTPDYVLSAYKDNAAVMEGSTVGRFFPD
                     QDGQYRYHQEDAHILMKVETHNHPTAISPFPGAATGSGGEIRDEGATGRGAKPKAGLT
                     GFSVSNLVIPKFEQPWENPLSKPNRIASALDIMIDGPLGGAAFNNEFGRPALLGYFRT
                     YEEKVNSFAGEEIRGYHKPIMLAGGIGNIRAEHVQKGEIPVGAKLIVLGGPAMNIGLG
                     GGAASSMASGKSKEDLDFASVQRENPEMERRCQEVIDRCWQMGAENPILFIHDVGAGG
                     LSNAMPELVHDGECGGKFDLRNILCDEKGMSPLEIWCNESQERYVLAVSPEKLDIFTA
                     LCERERAPFAVIGEATKEKHLTLADPHFDNKPIDLPMNVLLGKTPKMQRDVLSKTVKN
                     PPLATADIDLKEAFHRVLRLPAVAEKTFLITIGDRSVTGMVAQDQMVGPWQIPVADCA
                     VTTASLDSYHGEAMSIGERSPVALLDFAASARLAVAESITNIAATNIGDIKRIKLSAN
                     WMSAAGHEGEDAGLYEAVKAVGEELCPELGITIPVGKDSMSMKTTWEENGEQKSVTAP
                     LSLVISAFARVEDVRKTVTPQLRTDKGDTRLLLIDLGEGNNRLGATALAQVYKQLGDK
                     PADVVNVARLKGFFNAMQTLVAQGKLLAYHDRSDGGLITTLAEMAFAGNCGISVEIDR
                     LVDDLAVLFNEELGAVIQVRTEELSEVQAVLNAENLANLTFDIGTAVESDSFEITRNG
                     TTVFSQKRSELRGIWAELTHQMQRLRDNPECADQEFAAKKDPNNKGLSAFLTYDVNED
                     IAAPYINKGVKPSVAILREQGVNSHYEMAAVFDRAGFNAIDVHMSDLISGRRNLNDFN
                     AMVACGGFSYGDVLGAGGGWAKSILFNPMLRDQFSKFFANPNTLALGVCNGCQMVSNL
                     AEIIPGTENWPRFVRNKSERFEARAAMVKINDTNSLWFNGMAGSHMPIAVSHGEGQVE
                     FKNPQQLANLQQQNLVIAQYVDSHLNPTEQYPANPNGSALGITAIGNTDGRVAIMMPH
                     PERVFRAVSNSWCPEDWTEGGAWMRLFRNARVALKY"
     gene            4357..4539
                     /locus_tag="PXE50_002115"
                     /pseudo
     CDS             4357..4539
                     /locus_tag="PXE50_002115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            4988..5365
                     /locus_tag="PXE50_002116"
     CDS             4988..5365
                     /locus_tag="PXE50_002116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDL5622987.1"
                     /translation="MDKSQGVVSVNIRGGSGFGRANNAVGPNYMGMLAGKYQFNDSTW
                     IGALFGHSWRKISQNYKIGGGRKVTDSSIDLSKIDDLDKESSTTSPFNAAHLKQKPMS
                     RMAKLEYGDKYQTITLLPKSGSG"
     gene            6095..6871
                     /locus_tag="PXE50_002117"
     CDS             6095..6871
                     /locus_tag="PXE50_002117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDL5622988.1"
                     /translation="MNYSATLSAYIHDLFTPFISYSQTHRAPNIKEIFFSNLGDYGVN
                     TALQPEQAKTTQFGINGFKERVFSEEDKLGFKVLFYNTHLKNYIYNVQHTAVGSAPSL
                     FIFHKNYEKPVNIKGIELEFSYDIGSFYGNLAYARQNTNQPVSFTDASSRVDAASHYG
                     FKTQGFGASKISALPRDYGSLELGTRWFDQRLQIGGVAKYYGKSKRIAIDEFNYTYYP
                     GTHIVKETHRLEETVNKQPIIVDFYVSYEPIKSLILKLEL"
     gene            7475..7969
                     /locus_tag="PXE50_002118"
     CDS             7475..7969
                     /locus_tag="PXE50_002118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL5622989.1"
                     /translation="MSRKYKFHEKSGAYFVSFATVYWVGVFVREIYFQVIVDALDYCR
                     KHKGMILYAYCIMPTHIHLLFQAENQNPSDLIRDFKTFTAKILIQRIKDNLQENRREW
                     LLWMFSRAAERRCNVKQYQFWQHHNQPIEIYSQKFFDEKLNYIHQNPVVSGFVSEPWE
                     WKYN"
     gene            8224..8463
                     /locus_tag="PXE50_002119"
                     /pseudo
     CDS             8224..8463
                     /locus_tag="PXE50_002119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651213.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
     gene            complement(8662..>8831)
                     /locus_tag="PXE50_002120"
     CDS             complement(8662..>8831)
                     /locus_tag="PXE50_002120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL5622990.1"
                     /translation="IENFWSQAKRHLRKFNGIPKAHFELYLKECEWRFNHSDLKSQIF
                     LLKQLVKGGLG"
BASE COUNT         2709 a         1724 c         1909 g         2489 t
ORIGIN      
        1 atgaataaat gtatctaaca gcaaacgtct gacaaatata gcaatcgttt gcgcaatcgt
       61 ttataatcgg tttagttttt catcttaaat aggaaaatcc aaagaatgac aatccaaacc
      121 ttccgtggct cgcctgcctt atctgctttt cgcattcaac aacttctgca aaaattccaa
      181 caaaatcaat tacctgtaaa atcagtttat gcggagtttt tgcattttgt ggcattaaat
      241 cgaccgcttg tagccgatga agaaaacaaa atcaaagagt tattgcacta cggtccaacg
      301 ctggaagaag acgagccgac agggttttgc ctgattgtta cccctcgtat cggcacgatt
      361 tcctcgtggt cgtctaaggc aaccgacatc gcccataact gcggtttggc agcagtagag
      421 cgaattgagc gtggcacggc atattattta gaattttctg aaacgccgaa cgaaagtcaa
      481 cttacgacgt tgaaaggctt attacacgac cgtatgatgg aaacggtgct ggataacgaa
      541 agccaagccg aacagctttt cgctcagcaa gagccgaagc cgtttacttc ggtggatatt
      601 ttaggcggtg gtcgcaaggc actggaagaa gcgaatatca acttaggttt agcgttggcg
      661 gacgatgaaa ttgattactt ggtggaaaac tttacccaac ttgggcgtaa ccccaatgat
      721 attgaactct atatgttcgc ccaagccaac tcggagcatt gccgccacaa aatttttaat
      781 gcggattgga cgattgatgg ggtaaaacag gaaaaatccc tgtttaagat gattaaaaac
      841 acctttgaga aaaccccgga ctatgtgctt tccgcctaca aagacaatgc ggcggtgatg
      901 gagggctcaa cggttgggcg tttcttcccc gaccaagatg gacaatatcg ctatcatcaa
      961 gaagatgctc atattttaat gaaagtagaa actcacaacc acccaaccgc catctcgcca
     1021 ttcccgggag cggcgaccgg ttcgggcggt gaaattcgtg atgaaggggc gacagggcgt
     1081 ggggcgaaac cgaaagcggg cttgacgggt ttttcggtct ctaacttagt gatcccaaaa
     1141 tttgaacagc cgtgggaaaa cccgctttcc aagccgaatc gcattgcctc cgcactggat
     1201 attatgattg atggcccact aggcggagcg gcatttaaca atgaatttgg tcgtcctgcg
     1261 ttattgggct acttccgtac ttacgaagaa aaagtgaaca gcttcgcagg cgaagaaatt
     1321 cgtggctatc acaagccgat tatgttagca ggcggtatcg gcaacattcg tgccgaacac
     1381 gttcaaaaag gcgaaatccc ggtgggagcg aagttgatcg tgcttggtgg cccggcaatg
     1441 aacatcggct taggcggtgg ggcggcatcg tcaatggcat cggggaaatc gaaagaagat
     1501 ttggattttg cctcggttca gcgggaaaac cctgaaatgg aacgccgttg ccaagaggtg
     1561 atcgaccgtt gctggcagat gggggcggag aacccaattt tatttattca cgacgtgggg
     1621 gctggcggtt tatcaaatgc gatgcctgaa ttggttcacg acggcgaatg tggcggtaag
     1681 tttgatttgc gtaacatctt gtgcgatgaa aaaggaatgt cgccacttga aatttggtgt
     1741 aacgaatcgc aagagcgtta tgtgcttgcc gtttcccctg aaaaactcga cattttcaca
     1801 gcattgtgcg aaagggaaag agccccattt gcggtgattg gcgaggcaac gaaagagaag
     1861 catttaaccc ttgctgaccc tcattttgac aataaaccga ttgatttgcc gatgaatgtg
     1921 ttgctcggca aaacgccaaa aatgcagcga gatgttttgt caaaaactgt gaaaaatcca
     1981 ccgcttgcaa ccgctgacat cgacttgaaa gaggcgttcc accgtgtgct acgcttgcct
     2041 gcggtggctg aaaaaacctt cctgattacc atcggcgatc gctcagtaac gggaatggtg
     2101 gcacaagatc agatggtcgg cccgtggcaa attcctgtgg cagattgtgc cgtaaccacc
     2161 gcttcattag acagctatca cggtgaagca atgtcaattg gcgagcgatc acctgttgct
     2221 ttgcttgact ttgctgcctc agctcgcctc gccgtggcag aaagcatcac caatattgcc
     2281 gccactaaca ttggcgacat caaacgcatt aaactctcgg cgaattggat gtcggcggca
     2341 gggcacgagg gcgaagacgc agggctttac gaggcagtaa aagcggtggg cgaagagctt
     2401 tgccctgaat taggcataac cattccggta ggcaaagact caatgtcgat gaaaaccact
     2461 tgggaggaaa acggcgaaca gaaatctgtt actgctccgc tttcgctcgt gatttccgct
     2521 ttcgctcgtg tggaagatgt gcgtaaaacc gttaccccac aacttcgcac cgacaaaggc
     2581 gatacccgct tgttgctgat cgacctgggc gaaggcaaca accgcttggg tgcaaccgca
     2641 cttgctcaag tttacaaaca acttggcgac aaacctgccg atgtggtgaa tgtggctcgc
     2701 ttaaaaggct tcttcaacgc aatgcaaacc cttgtcgcac aaggaaaatt gcttgcctac
     2761 cacgaccgct cggacggtgg tttaatcacc acactggcgg aaatggcgtt tgcagggaat
     2821 tgcggaattt cggtggaaat cgaccgcttg gtggacgatt tagccgtgtt attcaacgaa
     2881 gaactggggg cagtaatcca agttcgcacc gaagaattga gcgaggtgca agcggtgtta
     2941 aatgccgaaa atcttgcaaa tctcaccttt gatattggta cagcggttga aagcgacagc
     3001 tttgaaatta cccgcaacgg cacaacagta tttagccaaa aacgttccga actgcgtggc
     3061 atttgggcgg aactcactca tcaaatgcag cgtttgcgag acaaccctga atgtgcagac
     3121 caagaatttg cagcgaaaaa agacccgaat aacaaaggct tatccgcatt tttaacttac
     3181 gatgtgaacg aagacatcgc cgccccatac atcaacaaag gcgtaaaacc gagtgtggcg
     3241 attttgcgtg agcaaggtgt aaacagccac tacgaaatgg cagccgtctt tgaccgtgcc
     3301 ggtttcaacg ccattgacgt gcatatgtca gacttgattt caggcagacg caacctcaac
     3361 gacttcaacg caatggtggc gtgcggaggc ttctcttacg gcgatgtctt aggtgcaggc
     3421 ggcggctggg cgaaatcgat tctgttcaac ccaatgctgc gtgaccaatt cagcaaattc
     3481 ttcgccaacc cgaacacgct ggcattaggg gtatgtaatg gttgccaaat ggtctccaat
     3541 ctagcggaaa ttattccagg cacagaaaac tggccacgct tcgtgcgtaa taaatccgaa
     3601 cgttttgaag cccgtgctgc aatggtgaaa atcaacgaca ccaactcact ttggttcaac
     3661 ggaatggcag gcagccatat gccgattgcg gtttcacacg gtgaaggaca agttgagttc
     3721 aaaaatccac agcaattagc gaacttgcaa cagcaaaatc tcgtgatcgc acaatatgtg
     3781 gatagccacc tcaacccaac cgaacaatac ccagccaacc cgaacggatc ggcgttgggt
     3841 atcaccgcta tcggtaatac agacggacga gtcgctatta tgatgccaca ccctgaacgt
     3901 gtgttccgtg cggtcagtaa ctcttggtgc ccagaagatt ggacggaagg tggagcgtgg
     3961 atgcggttgt ttagaaatgc gagagtggcg ttgaagtatt aaaaatctac cttcgtagtg
     4021 atctgccccc atagggggcg attaaaattc gaattcatag aacccgaatt tttatatatc
     4081 tgataaacga agttgtttat ccttcgtgct tttcctgata tttcaagtac tttcttatca
     4141 tttctgcatt gacatctacg gtgtctacgc agtagcctct tgccacaaaa gtgggttgcc
     4201 ccacaattta tgcttacgta aatagggaaa cttattgaaa aatcttattg gaccctgttc
     4261 acccttttaa atgccccatt acgtcttata cagaaaatga acgtgattta tttgaacggt
     4321 caattctacc ttaatagaaa gtggttttta gttagcaatc aaaatcacat taacggaatt
     4381 gagaatttgg agagtcaggc aaaatgctat ttgcgtaaat ttaacggcgt tcctaaagta
     4441 catgaattct atttgaaaga atgcagatgg cgttttaatc acagtaactt aaaatatcaa
     4501 gttttctttt taaaacaatt ggttaaattg agtttctagg atagcccctt atttttataa
     4561 tcctctattt aagtgcatat ttctatttat gctaatcgtc taacgtatcc ttttattata
     4621 atattgaaca tgattaatat tttcgtcttg tgctatacta gactcgtgca ataaaggcac
     4681 acttctttct tcagtgtctt tagcgttgcg atttaaattt aattacattt tttataggaa
     4741 agacaataga aatgaagatc aaaaaatatg tatttcacct gacttataca acacttatct
     4801 gccccttacc tagggtattc gcagaggaag gttatatgtt agatacggtt gaggttaaag
     4861 cccaagcaat aaaaaaacag atgaagtttt cattaaaaca ggggcaataa gcacccgaga
     4921 taaaatcttg gaatcaaacc aaagcttaga gactattgtt cgttctatgc ctggcgcatt
     4981 tacacaaatg gataaatctc aaggtgtggt ttctgttaat attcgaggag gttctggatt
     5041 tgggcgagct aataatgcag taggcccaaa ttatatggga atgctcgctg gcaaatacca
     5101 attcaatgac tctacttgga taggagcatt atttgggcat agttggcgca aaatctctca
     5161 aaattataaa ataggaggcg gacgaaaagt tacggatagc tcgattgacc ttagtaaaat
     5221 tgatgatcta gataaagaaa gttctaccac ctcaccgttc aatgcagctc atttaaaaca
     5281 aaaaccaatg agtcgtatgg ctaaattgga atatggcgat aaataccaaa ccatcacact
     5341 attaccaaag tcaggtagcg ggtagacatt taaaaaacca aaacaaccag ttaaattatc
     5401 gttttcactt gcccgagtca ccttggttag atgttcaagt ggcctatgcg gaaaatcaag
     5461 gcaaacaaaa ctacaacaaa gggagctgaa ttaataataa atatttaatt caaggtttgg
     5521 caattaacaa caaagcgaca accttaaatt tgagtaacac ctttaaagtg tctccgttta
     5581 aagatggaga atgggaagca atattaggtt ttaatcgttt aaagaaccgc tatagtaaaa
     5641 atagacatcc tgcggaatta aactataact tagagaatgg cgaaaccagc gaaaacaacg
     5701 attctgtagg aatgacagcc gttcgtaaat cgctttatac ttcaactttc cagcctgatg
     5761 gcgaacagaa gttcgatact ttttatctcg acaatcactt taactatggt atatggggat
     5821 tggatataaa cgcaaatatt aataccgctc ggtttattgg tcagcgtttt aaatattttc
     5881 cttttgcgat tagagaattg gagtcagata ttagacaggc aagtagaaat aggcagtttg
     5941 agcatttaag gtcattacaa tctcaattag acaacttgca aaaaaacatt gtacatatat
     6001 tccagatgag gattttccta atgatcctga attgggagag tttaactgtc ctgatgtcaa
     6061 ttttcctcat acagcaacag gaaaacataa acgaattaat tattcagcaa ccttgtctgc
     6121 ttatattcac gatttattca cgccctttat tagttattct caaacacatc gagcccctaa
     6181 tattaaagaa atattcttct ctaatttagg tgactatggt gtaaataccg cactacaacc
     6241 agagcaagcg aaaacaacac agtttggtat taatggattc aaagaacggg tatttagtga
     6301 agaagataaa ttaggattta aagtgctatt ttataacact cacttaaaaa actatattta
     6361 taatgtacaa cataccgctg ttggtagtgc tcctagttta ttcattttcc acaaaaacta
     6421 tgaaaaacca gtaaatatca aagggataga attagaattt agttatgata taggctcttt
     6481 ctatggcaac ttagcttatg ctcgtcaaaa tacgaatcaa cccgtatcct ttacagatgc
     6541 aagttcaagg gtagatgccg cttctcatta tggttttaaa actcaaggtt ttggtgccag
     6601 caaaatttca gcgttaccaa gagactatgg ctcattggag ttagggacaa gatggtttga
     6661 tcaaagacta caaattggcg gagtggcaaa atattacgga aaaagtaaac gtattgcgat
     6721 agatgagttt aactatactt attatcctgg aacacatatt gtgaaagaaa ctcatcggct
     6781 tgaagaaacc gtaaataaac aacctattat tgttgatttt tacgtgagct acgaaccaat
     6841 caagtcgctt atattaaagt tagaactata aaatgtcttt gacaaaaagt acattgatcc
     6901 tcttgatgct aataatgatg cagcaagtca gagggtttac aattctgata tcagtgatga
     6961 acctatttat acgctcaata attatgcaag agggagaact atagtgttta gcacaagtta
     7021 taaattctaa atggggttgt cctagataag ctagcttaaa tttcctttaa ctaattattt
     7081 ggcatagtga ctaaaattga gtctgcacag taggttaaaa ccttataata taaggattta
     7141 acccagatgg tgcaagcgtc cacgcttgtg ccagttaatt cctgttctga aagtatttca
     7201 gtcataagat aaaagcctaa atcagccaag taaaatttgg tttatttggg cttttgtttt
     7261 tggcacaagc gtggacgctt gcgtcatcat tttatttatc catccattgc tatcatttca
     7321 gtatttcttt ggcttatcac aagcggttaa attttatcaa cactttgcaa gttttaatga
     7381 tttttgcgat ctagatcgaa aaagttatat tggcttgtgg aatttaattt tgaatagggt
     7441 atttttctta ttccttttta agttgagaaa ggctatgagc cgaaaatata aattccacga
     7501 aaagagcggt gcttattttg tcagttttgc aactgtttat tgggttggtg tgtttgtgag
     7561 agagatttat tttcaggtaa ttgttgatgc cttagattac tgcagaaaac ataagggaat
     7621 gattttgtat gcctattgta ttatgccaac tcatatccat ttattatttc aagcagaaaa
     7681 tcaaaatcct tctgatttaa tacgagattt caaaacattc accgctaaaa tacttattca
     7741 gagaattaaa gataatttgc aagaaaaccg tcgggaatgg ttgctgtgga tgttttctcg
     7801 ggcggctgaa cgacgttgta atgtaaaaca atatcaattc tggcaacatc ataaccaacc
     7861 tattgaaatc tattcgcaga aattctttga tgaaaagtta aattatattc atcaaaatcc
     7921 agtggtaagt ggttttgtgt ctgagccttg ggaatggaaa tataattgaa ataaactgct
     7981 tgtatttttg cgatctctgt cgaaaaattg tgaattttta cttgtctgtc ggagaatttt
     8041 gcgtaaattc tgcttattat gttttagtta aaggtattct atgagtagat aacccaaatg
     8101 aaaatagcga tataacctat ttctacccag taattaattc ccgcttttat gtatcagatc
     8161 aaataattta cattgattta tcggtattat ctgtctttag tttttttaat taaggagcct
     8221 tatatgaaat tcaaaaaatt agcattagca gcaatgttag gtggcttatt tgtaacagct
     8281 aatgcggcag aattacctaa tatcactatt ttagcgacag gcggaacgat tgctggtagt
     8341 cagcagaatg caaatagtag tgcttatcaa gcagggcaat tgaatatcga aaccttaatt
     8401 gaagcagtgc cagaaatgaa aacattggcg aatatcaaag gtgagcagat tgtgaaaatt
     8461 ggcccactaa agccttgtta gatgtaggct atcaaggtat tgtcgtagca ggtgttggta
     8521 acggcaatat gagtgcggaa aatcttgcat tatttagagg aagccaacaa tatttttaag
     8581 atttttaata aacgttaaag catataaaaa atggcataag tgagtcactt atgccattat
     8641 ttttggggct gtcctagata actaacctaa ccccccttta accaattgtt ttaaaaggaa
     8701 tatttgagat tttaagtcac tgtgattaaa acgccattcg cattctttca aatatagctc
     8761 aaaatgggct ttcggaatac cattaaactt gcgtaaatga cgttttgctt gactccaaaa
     8821 attctcaatt c
//
LOCUS       DANLZQ010000103         8800 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.103, whole genome shotgun sequence.
ACCESSION   DANLZQ010000103 DANLZQ010000000
VERSION     DANLZQ010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8800)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8800)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8800
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.103"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(50..823)
                     /locus_tag="PXE50_002121"
     CDS             complement(50..823)
                     /locus_tag="PXE50_002121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-hexose-6-phosphate mutarotase"
                     /protein_id="HDL5622991.1"
                     /translation="MNLSNALKLIKYNELDVLEVNHNKFKAKIALQGAQLLSWQPYNA
                     EQDVLWLSEIEPFRIGSAIRGGIPICYPWFGSIKEPAHGTARIQEWRLVEHTCSDENV
                     GLVFALENKAKMEMMLGETCELYFTHLDPEPAQLALHSYFNIGDIEKVEVQGLPTRCF
                     DKLTDQEVEVPSPRKISENVDCIYPAQAVNFIQDFANQRTIKVEHINATETVLWNPWH
                     NTVSAMTETAYQNMVCVETARINTLLQQNETLGVRVLVR"
     gene            972..5168
                     /locus_tag="PXE50_002122"
     CDS             972..5168
                     /locus_tag="PXE50_002122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HDL5622992.1"
                     /translation="MKTKTFTRSYLASFVTIVLSLPAVASVVRNDVDYQYFRDFAENK
                     GPFSVGSMNIDIKDNNGQLVGTMLHNLPMVDFSAMVRGGYSTLIAPQYLVSVAHNTGY
                     KNVQFGAAGYNPDSHHYTYKIVDRNDYEKVQGGLHPDYHTPRLNKLVTEVVPAAVTNA
                     GTSIKPYLNEERFPMFLRAGSGTQALRGKESNKTTGIAGAYEYLTGGTTLQLSKSSPD
                     HWLDYSSNLYQVSYGPLSTYALPGDSGSGSYAYDMNEKRWVLVGVLNFYNGMDNQFNR
                     SAIIRKDFHEKKFAEDIAGTINNTVQNAQFNWTAQGKSSSLSQSNNVQKLNVDLKDSS
                     IANQNTSLPQENHGKTINFNGKDATIVLKQDIDQGAGALNLNANLTIRPETDQTWQGA
                     GIIVGKDKKVNWQVKNPQGDRLSKLGEGTLYVNGRGQNLGDISVGDGIVILNQQADHQ
                     GRKQAFNTVGIVSGRPTVVLGSADQVNPDNIYFGFRGGRLDLNGNSIAFKRIQNSDKH
                     ARIVNHNRDHISTLIIQGQDPLTSNDLIWGKWASNSPADIYEYTNPYQNKRKDYFRLK
                     GNSRVYYPTNATSNDHWEFLSSNREQAIQKILDAKNLRQRYDTFNGFIGEDASNKTNG
                     ILNVVFDTKTEVNTEQDKLKNIYTMSGGFNLNGELTLKGGTLLLSGHPTPHAYDIKNK
                     HDVVRENDWQDSHFTAKNITVNKMAQLYIGRNVNEVNSHFTATDKAKLNLGFINRSTP
                     SCYDSEYTGTTHCEVQAVISDNIFANLATTAIKGNVKLQNHSQLNLGKANLTGSVQAD
                     QTTHITLANHSHWLNNGTSQIGHLTMEKGSILSLNDKFATTEIPVRFNKMIIQGNLKG
                     NGRINYTANLAKGESDHLQVDGIAEGNFVLAVRNSTTEANPKSSLNLLSLKNSNQEGN
                     KASISLENNYVDLGTYRYVLENRNHNYHLFNPLIPNSTSKEMNATSVSSIPKKESVTN
                     VPTLDKKETEQNLTQLQKDFSAHQLENQKAKQSMINAQSELRRLNSQLNVLQKYVNSR
                     RLGYYTQQAVLEQISIIQNKIKQTQTIFNDANATVKLTDQKLEEAKLALGSVNDLVLI
                     KASAPAMQATNQDTSMMNIIQADWISQYANTALSELSAQANSALQISNSLDRQLFKQS
                     DKFNVWSSVEHQKTEHKSDLYRPYKQQTNLTQLGIQMPIDNGLMFGVALSKNHANAEF
                     NEGVNGKSNLLMASLYGKWQSQQGTFISLDGSYGKAKNQLYLFGENHFTRRISSIGAN
                     IGHQFDLAGVQIQPTIGARYYHFSGQDYTLGGAKISSPNTHFMTYQAGLKASKTFSLD
                     DWKVEPSITTHYVDASNKRLAVNVNNNNINQRFGRYLKTEAGIRFEHNQWQFDLHAGF
                     INGNEIKKQHFAGVKLGYSW"
     gene            complement(5223..6317)
                     /gene="mobA"
                     /locus_tag="PXE50_002123"
     CDS             complement(5223..6317)
                     /gene="mobA"
                     /locus_tag="PXE50_002123"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HDL5622993.1"
                     /translation="MSKTIEERISAVILAGGLARRMNGVEKGLQLFEGKPLISHILAR
                     LSPQVSDIWLNVNRSIEQYQQLYPAFSYYQDSLPDFQGPLSGMLAGFEQIESDYLLFV
                     PCDTPFMPELLLQKLKTALRINNVQIAYAHDGERPHPTFALIHRSVQEDLKAYLGSNQ
                     QQLLAFFQSQKSVAVDFSEQKSAFTNVNTLEDLSRVSQFPVKNLAITGYSGTGKTTLL
                     EKLIPKLTACGIRVGLIKHSHHNVDVDKKGKDSYRLREAGANPTMIVCDERWALMTET
                     KQAVEFSQLIAKFNPQEVDLVFVEGFKHETLPKIQLHRKGIEKPLPELDQWTIATATD
                     YPLERENWLDINNIGGIADFIKNWLENKAS"
     gene            6404..6673
                     /locus_tag="PXE50_002124"
     CDS             6404..6673
                     /locus_tag="PXE50_002124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1040 family protein"
                     /protein_id="HDL5622994.1"
                     /translation="MKCERLEELLELLGEHWRKNPDLHLIDILQQLSVEVGEPDNFKA
                     LSDEVLIYQLKMRNAGKFEPIPGIKKDYEDDFKTALLRARGILND"
     gene            6737..7375
                     /locus_tag="PXE50_002125"
     CDS             6737..7375
                     /locus_tag="PXE50_002125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HDL5622995.1"
                     /translation="MKKLALKTAFVALSALFTFNSTAIAADPTAGKEYIEVRKAPSAQ
                     KEVVEFFSFYCPHCYDFELSYKIPSQIKEKLPSDSKLVQYHVNFLGRQSEDLTRAWAL
                     AMALGAEDKVKTALFEGAQKDAFKSMDDIRSVFLANGITAEQFDSGINSFAVNGLVNK
                     QVQLAEDFQIRGVPAFFVNGQYQLNLEGFADSSSTNDFIKRYVDAVVFLSKK"
     gene            7459..8235
                     /locus_tag="PXE50_002126"
     CDS             7459..8235
                     /locus_tag="PXE50_002126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HDL5622996.1"
                     /translation="MTKLSILNLVPIREGQTAKQAVDSMVKLAKHAESIGIERYWIAE
                     HHNMKNLASSATQLLIQHALSHTEKLRVGSGGVMLPNHSPYIVAEQYGTLETLYPNRV
                     ELGLGRAPGTDMRTATALRRNAQSLPFPDEISELKGYFEGTNSVSAYPAQGLNVPFYI
                     LGSSPESAYLAAERGLPYAFASHFAPRFMDDAVRIYRTHFKPSEVLDKPYVILGVNAI
                     AAETDQEAEQLATTQTQFFLNVVTNAQNYLQPPVESDDKV"
     gene            8245..8499
                     /locus_tag="PXE50_002127"
     CDS             8245..8499
                     /locus_tag="PXE50_002127"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="luciferase"
                     /protein_id="HDL5622997.1"
                     /translation="MKAEIVPHFGPVSFQQNALYNQEKPVVRQMTACSLIGSRESIEQ
                     QLKSLKARIEIDEIMAVSYIFDEQKQHQSYTWLKEIADKV"
     gene            8501..8794
                     /locus_tag="PXE50_002128"
     CDS             8501..8794
                     /locus_tag="PXE50_002128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcZ/YiiS family protein"
                     /protein_id="HDL5622998.1"
                     /translation="MSKTMQQKAADAHNMCKLKGDSMLDNSDRQIAFEAVYDSEEIAV
                     QAVEFFTQKAKSVETEPCDIQSEITPIIDGFLMKMWITFSCQAEVILFQMAVR"
BASE COUNT         2911 a         1758 c         1626 g         2505 t
ORIGIN      
        1 taaatttgta aacaatatta ctaattcagc tgcttgctct cattaaacac tatcgcacta
       61 aaaccctcac tcctagcgtt tcattttgtt gaagtagagt atttatccga gcggtttcca
      121 cacataccat attttgatac gccgtttctg tcatcgcact aacggtatta tgccaaggat
      181 tccaaagtac ggtttcggtc gcattaatat gctcaacttt aatggtgcgc tgatttgcaa
      241 aatcttgaat aaaattcacc gcttgtgccg gataaataca atccacattt tcacttatct
      301 tgcgaggtga tggcacttca acttcttgat cggttagctt atcaaaacag cgagttggca
      361 agccttgcac ttccactttt tcaatatcac caatattaaa ataagagtgc aatgccagtt
      421 gtgctggttc tggatctaaa tgggtaaaat ataactcaca agtttcgcct aacatcattt
      481 ccattttcgc tttattctct aaggcaaata ccaaaccgac attttcatca gaacaagtat
      541 gctcaactaa acgccattct tgaatgcgag ctgtgccgtg ggcaggctct tttattgaac
      601 cgaaccacgg ataacaaatt ggtataccgc cacgaatcgc agagccaatt ctaaacggtt
      661 ctatctcact taaccacagc acatcttgct ctgcattata cggctgccaa cttagcaatt
      721 gtgctccttg taatgcaatt ttagctttga atttattgtg attaacttct agcacgtcta
      781 attcattata tttgattaat tttaatgcat tactcaagtt cataatttat tcctttgatg
      841 actaaaataa ttgacagcaa acactactta gtaattttat ataaaataag ggaagacatc
      901 ttgccaaact atcagttata agacagaata gccagaattt tttattactt ataaggataa
      961 acttctcatt tatgaagacc aaaacattta ctcgttctta tcttgcttct tttgtaacaa
     1021 tcgtattaag tttacctgct gtagcatctg ttgtacgtaa tgatgtggac tatcaatact
     1081 tccgcgattt tgccgaaaat aaaggaccat tttcagttgg ttcaatgaat attgatatta
     1141 aagacaacaa tggacaactt gtaggcacga tgcttcataa tttaccaatg gttgatttta
     1201 gtgctatggt aagaggtgga tattctactt taattgcacc acaatattta gttagtgttg
     1261 cacataatac tggatataaa aatgttcaat ttggtgctgc aggttataac cctgattcac
     1321 atcactatac ttataaaatt gttgaccgca atgattatga aaaggttcaa ggagggttgc
     1381 acccagacta tcatactcct cgattaaata aattagtaac agaagttgtg cctgccgcag
     1441 tcaccaatgc aggtacatct attaaaccct acttaaatga agaacgcttc cctatgtttc
     1501 ttcgtgctgg ttcagggaca caagcgctaa gaggaaaaga aagtaataaa acaactggaa
     1561 tcgctggtgc ttatgaatat cttactggcg gtaccacatt acaattatct aaaagctccc
     1621 ctgatcactg gttagattat tcaagtaacc tttatcaagt aagctatgga ccactttcaa
     1681 cctatgcact acctggtgat agtggttcag gttcttacgc ctatgatatg aacgaaaaac
     1741 gatgggtatt agttggtgtg ctcaatttct ataatggtat ggataatcaa ttcaaccgct
     1801 ctgcgattat ccgtaaagat ttccacgaga aaaaatttgc cgaagatatt gcaggaacaa
     1861 tcaataatac cgtacaaaat gcacaattca attggactgc tcaaggtaaa tccagctctc
     1921 ttagtcaatc aaataatgtg caaaaactca acgttgatct aaaagatagt agcattgcaa
     1981 accaaaacac ttctctgcca caagaaaatc acggtaaaac cattaatttt aatggtaaag
     2041 atgcaactat tgtactaaaa caggatattg accaaggtgc aggtgcatta aatctgaacg
     2101 ctaatctcac tattcgtcct gaaacagacc aaacttggca aggtgcaggt attatcgtcg
     2161 gtaaagataa aaaagtgaat tggcaagtaa aaaatccaca aggcgatcgt ttatctaaac
     2221 tcggggaagg aacactctat gtaaatggac gtggacagaa tcttggcgat atcagtgtag
     2281 gtgatggtat tgtaatactt aaccagcaag ccgatcacca aggaagaaaa caggccttta
     2341 atacagtagg aatcgtaagt ggtcgcccca ctgttgtgct aggtagtgca gatcaagtta
     2401 atcccgataa tatttacttt ggatttcgcg gaggtcgttt agacctaaac ggtaacagca
     2461 tcgcctttaa acgtattcaa aacagcgata aacatgctcg tattgtaaac cacaatcgcg
     2521 atcacatttc taccttaata atacaaggcc aagatcctct cactagtaat gatcttatat
     2581 ggggaaaatg ggcaagtaat agcccagcag acatttacga atataccaat ccttatcaaa
     2641 ataaacgcaa agattacttc cgtctgaaag gtaattcgag agtatattat ccaacgaatg
     2701 ctacaagtaa cgatcactgg gaatttcttt ccagtaaccg cgagcaagca atacagaaaa
     2761 tcctagatgc caaaaactta agacagcgct atgacacgtt taatggtttt ataggggaag
     2821 atgcttccaa taaaactaat gggatattaa atgtcgtgtt tgatacaaaa acagaagtaa
     2881 atacagaaca agataaatta aagaatatct acacaatgtc gggaggattt aaccttaatg
     2941 gtgaactcac ccttaaaggt ggtacattgt tgctttctgg tcacccaacg ccacacgctt
     3001 atgatattaa gaataagcat gatgttgtgc gtgaaaacga ttggcaagac agccatttta
     3061 ctgctaaaaa tatcacggta aataaaatgg cacaactcta tatcgggaga aatgtcaatg
     3121 aagtaaatag tcactttact gcgactgata aagccaaact caatttagga tttattaatc
     3181 gttcaacgcc aagttgctat gattctgaat acacaggcac tacacattgt gaagtgcaag
     3241 cggtcatttc cgataatatt tttgcaaatc tagcaacaac cgccattaaa ggtaatgtta
     3301 aattacaaaa ccatagccaa ttaaatttag gcaaagcaaa cctcactggt tctgtacaag
     3361 ctgatcaaac aactcatatc actttagcaa atcacagtca ctggttaaac aatggtacga
     3421 gccagattgg gcatcttaca atggaaaaag ggtcgatcct tagcctaaac gataaatttg
     3481 ctaccacgga aatcccagtc cgattcaaca agatgatcat ccaaggtaat ctaaaaggta
     3541 atggacgaat taactatacc gcaaatttag ccaagggcga atctgatcat ctccaagttg
     3601 acggtattgc tgaaggaaat tttgtccttg ccgttagaaa tagcacaact gaagcaaatc
     3661 caaaaagctc attaaaccta ctaagcttaa aaaatagcaa ccaagaaggc aataaagctt
     3721 ctatttctct agaaaataat tatgttgatc taggtactta tcgttatgta ttagaaaatc
     3781 gtaatcacaa ttaccattta tttaatccat taataccaaa ttcaacctct aaagagatga
     3841 atgctacatc tgtatcctct attccaaaaa aggaatctgt tactaatgtt cctactttag
     3901 ataagaaaga aactgaacaa aatcttactc aactacaaaa agatttttca gcacaccaat
     3961 tagaaaatca aaaagcaaaa caatctatga taaatgctca atctgagcta agacgactca
     4021 attcacaact gaatgtattg caaaaatatg tgaattctcg tcgcttaggt tactatactc
     4081 agcaggcagt tttagaacaa attagcatta ttcaaaataa aattaaacaa acacaaacaa
     4141 tatttaatga cgctaatgca actgtaaaac tcacagatca aaagctagaa gaagccaaat
     4201 tagctctagg ctctgtaaac gatcttgtat taataaaagc ctctgctcca gcaatgcaag
     4261 caactaatca agatacgagt atgatgaata ttattcaagc agattggata agccaatacg
     4321 ctaacacagc actttctgaa ctctcggcac aggctaattc tgctctgcaa atcagtaata
     4381 gcttagatcg ccaactcttc aaacaaagcg ataaattcaa cgtatggagc agcgtcgaac
     4441 atcagaaaac cgagcataaa tcagatttat accgcccgta taaacaacaa accaacctga
     4501 cccaactggg catacaaatg ccgatagata acggtttaat gtttggagtt gcattatcta
     4561 aaaaccacgc taacgcggaa tttaacgagg gtgtaaacgg taaatcgaat ctactaatgg
     4621 caagcctata tggtaagtgg caatctcaac aaggcacttt tatcagcctt gatggcagct
     4681 acggtaaagc aaaaaaccaa ctctacctat ttggtgaaaa ccactttacc cgccgaattt
     4741 cctctattgg tgctaacatt ggacatcaat ttgacctcgc aggagttcaa attcagccaa
     4801 caataggagc aagatactac catttcagcg gccaagacta tacactagga ggagcgaaaa
     4861 tcagctcacc aaatacccac tttatgacat atcaagcggg tctaaaagct agtaaaacct
     4921 tttcattgga tgactggaaa gttgaaccaa gcattacaac ccactatgtg gatgcaagta
     4981 acaaacgctt agcagtaaac gtcaataata acaatatcaa ccaacgtttc ggtcgctatc
     5041 tgaaaaccga agctggtatc cgatttgaac ataaccaatg gcaattcgac ttacacgctg
     5101 gtttcattaa cggcaacgaa atcaaaaaac aacattttgc tggtgttaag ctaggatata
     5161 gctggtaaga aaaagcccct agaactattt ctaggggctt tttctactct taaaaagagt
     5221 atctaacttg ccttattttc taaccaattc ttaataaaat ctgctattcc cccaatatta
     5281 ttaatatcca accaattttc tctctcaagc gggtaatccg ttgcggtggc aatcgtccat
     5341 tggtctagct ctggcaatgg tttttcaatc cctttgcggt ggagctgaat ttttggcaag
     5401 gtttcgtgtt taaagccttc tacgaaaacg agatcaacct cttgcgggtt gaattttgca
     5461 attaattgag aaaattcgac cgcttgtttg gtttctgtca ttaatgccca acgttcatcg
     5521 cacacaatca ttgtcgggtt tgctcctgct tcacgtaggc ggtagctgtc tttgcctttt
     5581 ttatctacat caacgttatg gtgggaatgt ttaatcagcc caacccgaat accgcaagcg
     5641 gtcaattttg ggattaattt ttccaataag gtggttttac ctgtgccgct gtagcctgta
     5701 attgcaaggt tttttacagg gaattggctt actcggctta aatcttccaa tgtattcacg
     5761 ttggtgaatg ccgatttttg ttcggaaaaa tcaactgcca cgcttttttg tgattggaag
     5821 aacgcaagca attgctgttg gtttgagcct aaataggctt tcaaatcttc ttgtaccgaa
     5881 cgatgaatca acgcaaaagt gggatgtgga cgctcaccat catgggcata tgcaatttgt
     5941 acgttattta tccgcaaagc agtttttaat ttttgcaata acagctcagg cataaagggc
     6001 gtatcgcaag gcacaaaaag caaatagtca ctttcaattt gctcaaatcc tgccagcatt
     6061 ccactgagtg gaccttgaaa atcaggcaag ctatcttgat agtaagaaaa agcaggataa
     6121 agctgctgat attgctcaat agaacgattg acattaagcc aaatgtcact aacttgtggt
     6181 gaaagtcggg ctaaaatgtg tgaaataagc ggttttcctt caaaaagttg taaccctttt
     6241 tctaccccat tcattcgacg agctaaaccg cccgctaaaa tcacggctga aatgcgttct
     6301 tctattgttt tactcacagc tttatccctt aaaattttgc aaaaataaga gtaaaagtat
     6361 attatttcgt ttaatttcca acaagttttt taaggggtaa aagatgaaat gcgaacgttt
     6421 agaagagtta ttagagttac ttggcgaaca ttggcgtaaa aatcctgact tacacctcat
     6481 tgatattttg cagcagcttt cagttgaagt gggcgagcct gataatttca aagcgttaag
     6541 cgatgaagtg ttaatctatc agcttaaaat gcgaaatgca ggcaaatttg agcctattcc
     6601 cggcataaaa aaagattatg aagatgattt taaaacggct ttattgcgag ctcgtggaat
     6661 tttaaacgat taagattgtc ttatccgtta gctagtttag catttattat ttatcaacat
     6721 ttttgaagga atcattatga aaaaattggc attaaaaacg gcatttgttg cactttctgc
     6781 cctttttaca tttaactcaa cggcaatcgc tgctgatcca accgcaggca aagaatatat
     6841 cgaagtgcgt aaagcacctt ctgcacaaaa agaagtggtg gaatttttct cattctactg
     6901 cccacactgt tatgattttg aattaagcta caaaatccca agccaaatca aagaaaaatt
     6961 accaagcgat agcaaattag tgcaatatca cgttaatttc ttaggtcgcc aatctgaaga
     7021 tttaactcgt gcttgggcat tagcaatggc attaggtgcg gaagataaag taaaaaccgc
     7081 attatttgaa ggtgctcaaa aagacgcatt caaatcaatg gacgatattc gctctgtatt
     7141 cttagcaaac ggcattacag ctgaacagtt tgatagcggt attaatagct ttgcggtaaa
     7201 tggcttagtg aataaacaag ttcaattagc ggaagacttc caaattcgtg gtgtgcctgc
     7261 attcttcgta aatggtcaat accaactcaa cttagaaggc tttgcagatt cttcatcaac
     7321 gaatgatttc atcaaacgtt atgttgatgc ggttgtgttc ttaagcaaga aataacccct
     7381 taaaatagtt agggttttta caatgctgag taggtaaatc ctattcagca ttttttatat
     7441 gcaaactcgg agaacaaaat gacaaagtta tctatcctaa accttgtacc tattcgtgaa
     7501 gggcaaactg ccaaacaagc ggtcgattct atggtgaaat tagcaaaaca cgcggaaagt
     7561 atcggcattg aacgctattg gattgcagag caccacaata tgaaaaacct tgccagctcg
     7621 gcaacacagc tcctcattca gcatgccctt tctcacactg aaaaattaag agtgggatca
     7681 ggtggcgtga tgttgcctaa ccatagtcct tatattgtgg cagagcaata cggtacgctt
     7741 gaaacactct accctaaccg tgtagaactt gggcttgggc gagcaccagg caccgatatg
     7801 cgaaccgcta ccgctttacg ccgtaatgca caaagtctgc catttcctga tgaaatcagc
     7861 gaactaaaag gttattttga aggcacaaat tctgtgtctg cctaccctgc acaggggttg
     7921 aatgtgccgt tttatatttt aggctcaagc cctgaaagtg cctatttagc agcagaacgt
     7981 ggcttgcctt atgcctttgc ttcacatttc gctcctcgtt ttatggacga tgcggtgcga
     8041 atttatcgca cacactttaa gccgtctgaa gtgttagata aaccctatgt gattttaggt
     8101 gtgaatgcga ttgcggcaga aaccgaccaa gaggcagaac agcttgctac cactcagact
     8161 cagtttttct taaatgttgt taccaatgcc caaaactatt tacaaccgcc cgtcgaatcc
     8221 gatgataaag tgtgaaaaaa ttttgtgaaa gcggaaatcg taccgcattt cgggcctgtt
     8281 tcgttccaac aaaatgcgtt atacaaccaa gagaaacccg ttgttcgcca aatgactgct
     8341 tgttcactta tcggtagccg agagagcatt gaacaacagc tcaagtcatt aaaagcacgc
     8401 attgaaattg atgaaattat ggcggtaagc tacattttcg atgagcaaaa acagcatcaa
     8461 tcctatactt ggttaaaaga gattgcagat aaggtgtgat atgagcaaaa caatgcaaca
     8521 aaaagccgct gatgcacata atatgtgtaa gctaaaaggc gactctatgt tagataactc
     8581 agaccgccaa attgcctttg aagcagtgta tgatagtgaa gaaatagctg tacaagcggt
     8641 cgaatttttc acacaaaaag caaaatcggt agaaaccgag ccttgcgaca ttcaaagtga
     8701 aatcacaccc attatagatg gctttctgat gaaaatgtgg ataactttca gttgccaagc
     8761 agaagtaatc ttatttcaaa tggcggtgag atagatataa
//
LOCUS       DANLZQ010000104         8562 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.104, whole genome shotgun sequence.
ACCESSION   DANLZQ010000104 DANLZQ010000000
VERSION     DANLZQ010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8562)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8562)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8562
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.104"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(<1..246)
                     /locus_tag="PXE50_002129"
     CDS             complement(<1..246)
                     /locus_tag="PXE50_002129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5622999.1"
                     /translation="MITSNLERSFHGLNIAQHNYKIFLDESGGNIGKLKHTPNDKKGS
                     NFNRTISSHIGVPPVFVLGGIAQISNANLIAPDWRKLL"
     gene            complement(273..947)
                     /gene="cas4"
                     /locus_tag="PXE50_002130"
     CDS             complement(273..947)
                     /gene="cas4"
                     /locus_tag="PXE50_002130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated protein Cas4"
                     /protein_id="HDL5623000.1"
                     /translation="MGDLQNSAEILPLVQPKFGDDKRSISLSALQHYAFCPRQCALIH
                     NEQVWAENYLTAQGQALHERVDSGEPEVRKGIRFERTVHVAAEKLGISGILDLVERDL
                     KTGELKPVEYKRGKPKLDPIDEIQLCAQALCLEEMTEQTINEGALWYMQTRHRLPIIF
                     STELRTKTLATIAEVRSLLDSGTTPPPEYSKRCKACSLIDLCQPKLLERDRSKGYVVG
                     VFGSLL"
     gene            complement(947..1810)
                     /gene="cas7c"
                     /locus_tag="PXE50_002131"
     CDS             complement(947..1810)
                     /gene="cas7c"
                     /locus_tag="PXE50_002131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-C CRISPR-associated protein Cas7/Csd2"
                     /protein_id="HDL5623001.1"
                     /translation="MSIQNRYEFVFFFDVTNGNPNGDPDAGNMPRLDPETSKGLVTDV
                     CLKRKIRNFIEMSYENEAGYEIYVKEKSVLNLQNKRAYEALGIESEAKKLPKEEAKAR
                     EITAWMCKNFFDIRTFGAVMTTEVNSGQVRGPVQLAFAQSIDPIIPLEVSITRMAVTN
                     EKDLEKERTMGRKYIVPYALYRVHGFISAKLAEKTGFSDEDVQKLWQALQLMFEHDRS
                     AARGEMAARKLIVFKHDSELGNQPAHKLFDSVKVERINGEKDTPAKDYDDYCISVQTE
                     GLTGVTVEELL"
     gene            complement(1820..3601)
                     /gene="cas8c"
                     /locus_tag="PXE50_002132"
     CDS             complement(1820..3601)
                     /gene="cas8c"
                     /locus_tag="PXE50_002132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-C CRISPR-associated protein Cas8c/Csd1"
                     /protein_id="HDL5623002.1"
                     /translation="MITALTRYYYRLAAQEDRLTGEAKVPSYGFSEEKIGWVLELDSK
                     GNLVNVISNLTEDKKPKPKLMSVPRPEKRTSGIKPNFLWDKTAYVLGIESNPDKATAK
                     DQPINFAEKTFEAFKQYHLDLLADSNDEGLMAIRNFLQQWQPTHFAESICPREILDAN
                     VVFKLVGTSGYIHQREAAQTLWTSLLINQSDNAEKGLCLISGKLSPIQRTHPPIKGVF
                     GGQSSGGSIISFNKESFTSFGKEQGSNAPVSEQAAFAYTTALNYLLRTEKHRLTIGDA
                     STVFWAEADNTTQAEAAEGFFAALMTPPDDEQENQKIFEELQKISKGRPLAEISPELS
                     ENTRFYVLGLAPNAARISVRFWLDTTFGQLAKNLSEHWQDLALEPCPWKTPPSIWRLL
                     LQTASLGKSENISPVLAGEMARAVISGHLYPMSLLSQLVTRIRADGDINGLRVALMKA
                     VLQRKFRKGFIKEGVPMSLNKESDNQAYLLGRLFAVLERIQSQALGELNAGIADRYYG
                     SASAVPFSVFPRLLSGAKHHLSRLRKDKGGMAVNLDKDLGEIIASLPENFPRHLSIDE
                     QGRFAIGYYHQKQSYFAKKETTESIEN"
     gene            complement(3623..4300)
                     /gene="cas5c"
                     /locus_tag="PXE50_002133"
     CDS             complement(3623..4300)
                     /gene="cas5c"
                     /locus_tag="PXE50_002133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-C CRISPR-associated protein Cas5"
                     /protein_id="HDL5623003.1"
                     /translation="MPNKIRLHIWGDYACFTRPEMKVERVSYDVITPSAARGILAAVH
                     WKPAIRWVIDKIYVLQPIQFESVRRNELGSKISASKISGAMKRKTVADLYTVIEDDRQ
                     QRAATVLKNVGYVIEAHAVLTKMAGEAETVTKHIEMFKRRAKKGQCFQQPCMGVREFA
                     ANFALIDDDEPLPECFLAENERDRDLGWMLHDIDFEHGNQPRFFRAEMKNGVIDVPPF
                     YAEEVKS"
     gene            complement(4542..6293)
                     /locus_tag="PXE50_002134"
                     /pseudo
     CDS             complement(4542..6293)
                     /locus_tag="PXE50_002134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250669.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF87 domain-containing protein"
     gene            complement(6283..6744)
                     /locus_tag="PXE50_002135"
     CDS             complement(6283..6744)
                     /locus_tag="PXE50_002135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623004.1"
                     /translation="MFKPHGSLDWFMAGDVPMTSCIGKVEEPLIITPGVGKYKKGYGQ
                     PFDAHREKANEAIDSASSILCIGYGFNDDHLQTHLTGKIKSGVKTLLLTRGLSENARN
                     VVKEAPNCKALIFDGDKAGTRVVSKQEETFIPNVHWWDVEFFVKEILENGK"
     gene            complement(6903..8039)
                     /locus_tag="PXE50_002136"
     CDS             complement(6903..8039)
                     /locus_tag="PXE50_002136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL5623005.1"
                     /translation="MLLRKAFKFEIRPNGEQVRKMKQFCGCSRFVFNKALAWQNEQYE
                     QDNHHKFSYTKLANLLPQWKKELVWLKDCHSQVLQQSLKDLESAFKNFFQKRADLPKF
                     KKKGVKESFRFPQGCKIEQKNDRLYLPKIGWVRYRNSREIVGEVKNVTVSMKCGRFFV
                     SIQTEFKQEIPTHKGGEIGIDMGIARFATLSNGEFFEPLNAFKTHKGKLAKLQKQLKN
                     KVKFSKNWQKLKDKIGKLHHKIANCRKDFLHKISTQISKNHAMIYVEDLQVANMSKSA
                     KGTAEVHGKNVKQKSGLNRVILDQSWFEFRRQLDYKTQWLGGFLLAVPPQNTSRTCPC
                     CNYTAKENRQTQENFECVECGYTENADVVGAMNVLTRGQAIVQA"
     gene            8086..8502
                     /gene="tnpA"
                     /locus_tag="PXE50_002137"
     CDS             8086..8502
                     /gene="tnpA"
                     /locus_tag="PXE50_002137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005720092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HDL5623006.1"
                     /translation="MKKETEIRRGRHVVFNLHVHLVFVTKYRREVFTQAILNDLHSIF
                     ATICADFEATLVEFDGEDDHVHLLVEYPPKVAISHLVNSLKGVSSRMIRKKNYPSIRK
                     KLWGNQLWSPSYFAGSCGGAPISIIRQYIEQQQTPD"
BASE COUNT         2339 a         1929 c         1629 g         2665 t
ORIGIN      
        1 aaggagtttt ctccaatcag gagcaattaa attagcatta ctaatttgag caatccctcc
       61 taatacaaat acaggaggaa ccccaatgtg ggaagaaatg gttctattaa aattactacc
      121 ttttttatca ttaggcgtat gttttaactt cccaatattt ccaccactct catcaagaaa
      181 tattttgtag ttatgctgtg ctatatttaa tccgtgaaat gatctttcta agtttgaagt
      241 tatcacaaca agtccctccc caaagtaggt aattataata aagatccaaa cactcccacc
      301 acatacccct tcgatctatc cctttccaac aactttggtt ggcagaggtc gataagcgag
      361 caggctttgc agcgtttgct gtattctgga ggaggtgtgg ttccgctatc taagagcgac
      421 cgcacttcgg caatggtggc gagggttttg gtgcgtagtt cggtggaaaa aatgatcggc
      481 aaacggtggc gagtttgcat ataccacaac gccccttcgt taatcgtctg ctctgtcatt
      541 tcttccaaac ataaggcttg ggcacagagt tggatttcat caatcggatc aagtttgggc
      601 ttgccacgtt tgtattccac tggttttagc tcgcctgttt ttaggtctcg ctcaaccaaa
      661 tccaaaatgc cgcttatgcc taatttttcg gctgcaacgt gaaccgttcg ctcaaagcga
      721 atccctttgc gaacttctgg ctcaccacta tctacccgct cgtgcaacgc ttgaccttgt
      781 gcggtgagat agttttctgc ccacacctgt tcgttgtgga tcagcgcaca ttgacgtggg
      841 cagaaggcat agtgttgcaa agcggaaagc gaaattgacc gcttgtcatc gccaaatttt
      901 ggctgaacaa gcggtaaaat ttccgcagaa ttttgcaaat cgcccattac agtaattctt
      961 caacggttac acccgttaag ccttcggttt gtacgctgat acagtaatcg tcatagtctt
     1021 tcgctggcgt gtctttttca ccgttgattc gctcaacttt taccgagtca aacagtttgt
     1081 gtgcaggttg gttgcctaat tcgctgtcgt gtttaaatac gatcagttta cgagctgcca
     1141 tttcgcctcg tgcggcagaa cggtcgtgtt caaacataag ttgcaaggct tgccaaagtt
     1201 tttgtacatc ttcatcagaa aagcccgttt tttcagcgag tttagctgaa ataaagccgt
     1261 gaacacgata aagtgcgtaa ggcacgatat atttacgccc catagtccgt tctttttcaa
     1321 gatctttttc gttggtcact gccattcgtg tgatcgatac ttctagcgga ataatcggat
     1381 cgatagattg agcgaacgcc aattgcactg ggcctcgcac ctgtccgctg tttacttcgg
     1441 tagtcattac cgccccaaag gtgcgaatat cgaaaaagtt tttgcacatc caagcggtaa
     1501 tttctcgggc tttagcttcc tcttttggta gttttttcgc ttccgattca atccctaatg
     1561 cttcataagc acgtttgttt tgtaaattca gaacactttt ttctttaaca taaatttcgt
     1621 aacccgcctc gttttcatag ctcatttcaa taaaattgcg gattttgcgt tttaggcaaa
     1681 catcggtgac taaaccttta ctggtttcag gatcaaggcg tggcatattt cctgcatctg
     1741 gatcaccatt tgggttaccg ttggttacat caaagaaaaa aacaaattca tagcggtttt
     1801 gaatagacat agtgtttcct tagttttcaa tagactcagt ggtttctttt ttagcgaaat
     1861 agctttgttt ttggtggtaa taaccaatcg caaaacgccc ttgttcatcg atacttaaat
     1921 ggcgagggaa attttccggc aagctggcaa taatctcacc taaatcctta tccagattaa
     1981 ccgccattcc gcccttatct tttctcaagc gagataaatg gtgttttgca ccgcttaata
     2041 agcgagggaa taccgaaaac ggcacggcag aagccgaacc ataatagcgg tcggcaatgc
     2101 cggcatttaa ttcgcctaat gcttggcttt ggattctttc taatactgca aataacctgc
     2161 cgagcaagta agcttggtta tcgctttctt tatttaagct cataggaact ccttctttaa
     2221 taaaaccttt tctaaatttt cgttgtaaga ctgctttcat caacgctact cgcaaaccgt
     2281 taatatcgcc gtctgctcgg attcgagtca ctaactgtga aagtaaactc atcggatata
     2341 aatgaccgct aataactgcg cgagccattt cacccgccaa gactggagaa atattctcac
     2401 ttttacctaa tgaagcggtt tgtaataata gtcgccaaat ggaaggtggt gttttccatg
     2461 ggcaaggctc aagagcgaga tcttgccaat gctcgctgag gttttttgcc agttgcccaa
     2521 aggtggtatc cagccaaaaa cgtaccgaaa tgcgagctgc atttggagca agccccaaca
     2581 cataaaaacg ggtgttttca gataattctg gggaaatttc tgcaagcggt cgtcctttgc
     2641 tgattttttg caattcttca aagatttttt ggttttcttg ctcatcatct ggaggcgtca
     2701 ttaaagcagc aaaaaagcct tcagcagctt cagcttgggt ggtattgtct gcttctgccc
     2761 aaaagacagt gctggcatca ccaatagtta aacgatgttt ctcggtgcgt aacaaataat
     2821 ttaaagcagt agtgtaggca aaggcggctt gttcagaaac aggggcatta ctaccttgtt
     2881 ccttgccaaa tgaagtgaag gattctttat tgaaagagat gattgaacca ccggaacttt
     2941 gcccaccaaa taccccttta ataggaggat gagttcgttg aattggcgat aatttgcctg
     3001 aaattaagca taaacctttt tcagcattat cactttgatt tatcaacaaa cttgtccaaa
     3061 gggtttgtgc agcttctcgc tgatgaatat aaccgcttgt gccgactaat ttaaacacga
     3121 cattcgcatc aagaatttct cttgggcaga ttgattcggc aaaatgtgtg ggttgccatt
     3181 gttgcaggaa atttcttatc gccattaaac cttcatcatt ggaatctgca agcaaatcca
     3241 aatggtactg tttaaatgcc tcaaaggttt tctcggcgaa attgatgggt tgatctttgg
     3301 cggtggcttt atcaggatta ctttcaatgc ctagcacata agcggtttta tcccacagaa
     3361 aattgggctt aatgccagac gtgcgttttt cagggcgagg tacgctcatc aatttcggtt
     3421 ttggtttctt atcttctgtt aaatttgaga tcacattgac caaatttccc tttgaatcta
     3481 attctagtac ccaaccgatt ttttcttcac tgaaaccata agaaggcact ttagcttcgc
     3541 ctgttaagcg atcttcttgt gctgcaaggc ggtaataata gcgagttaag gcggtaataa
     3601 tagcgagtta aggcggagag aatcatgatt tgacctcctc tgcataaaat ggtggcacat
     3661 caatcacgcc atttttcatt tccgcacgga agaaacgagg ttgattaccg tgctcaaaat
     3721 caatgtcgtg caacatccag cctaaatccc gatctcgctc attttctgcc aaaaaacact
     3781 caggtaacgg ttcatcgtca tcaatcaagg caaaatttgc ggcaaattca cgcacgccca
     3841 tacaaggctg ctggaaacat tgcccctttt tcgcacggcg tttaaacatt tcaatatgct
     3901 tggtgacggt ttccgcctcg cctgccattt tggtcagcac tgcgtgagct tcgatcacat
     3961 aaccgacatt tttcagcaca gtagcagcac gttgttggcg gtcgtcttca atcacagtat
     4021 ataaatccgc cactgtttta cgcttcattg caccactgat tttactggca gaaattttac
     4081 tgcctaactc attacggcga acagactcaa attgaatcgg ttgtaataca taaattttat
     4141 caatcaccca gcgaattgcc ggcttccaat gcaccgcagc caaaatcccc cgtgccgcag
     4201 acggcgtaat cacatcataa gacacccgtt ctaccttcat ttcaggacgg gtaaaacaag
     4261 cataatcacc ccaaatatgg agcctgattt tgtttggcat aatagaatgc tccttttaat
     4321 tatgtaacac acacctcccc gaagggaggt gaaatttctt tagcttatat tataactgct
     4381 ttggtttcaa cccacgcact cagtaaaatg cgaaaaattt tatggcttat tatattaagc
     4441 ggtcggattt acttagaaag ttgcaaagtt atttgagtat ttaaccgctt gtatttcaaa
     4501 aatagtcaga aaaataacag cattctaggt acaatatttt tctaagaacg aacttgtctc
     4561 cgcaatgcct ctactgcgtt tgacacagca tttggtttgg gctcctggtt tgcccaatca
     4621 gaccagaatt ggcgtgtagc actttctggg gctatatgcg gtttagcaag tttgattcgt
     4681 gtaggtaata gaatcgaatc gcctagcaat aacgcttcgc ctaaatcaag taacggcaat
     4741 atatcagtaa ttccaaccat agattccggc aataaacgct ttacaacact ttgatcttga
     4801 ccatttgtta atcgtaaaac caagaaatta ttacattgac tcaaaattgt tcggcttaca
     4861 tctgaaggac gttggctaac gaccaacaaa gacacgccat attttctacc ttctttcgca
     4921 atccgctcaa aggcttccaa tgcgcgtttt tccgctgctt ccgctgaatc tcgaacaggg
     4981 agatataaat gtgcttcatc gcaaataatc gttagtggat ggcgggaatc tttatccatc
     5041 caaaattgaa tgttgtataa aaggcgggca agaactcccg taacaatcgg taaaacatcc
     5101 gacgggactt ccgaaaaatc aataattttt atcccttttt cgctctcaga agcagaaaac
     5161 agttttgaca acatattttc cagccaccca tagctgttgc actctactgg cggttggaac
     5221 ataaaaccgc aacgtctgtc atctattttg gctttcatcc ttcccataaa cctagacaac
     5281 ttactatacc aaggaccttg ctttgttcct gaacctccct ctttaggtac catctcagaa
     5341 ttatctttat ctaaacgagc taacaataat tcaatagaat acggaattgg cgaatcaaca
     5401 gtaaacgttt ccaaaacatc atttctttct tccttattca atgtttgctc ttttaatgcg
     5461 cgaacatgct cagtaaaacg cgccgcctga ttcggagcat tatcatcact gcgatctaaa
     5521 attaaagcca gcatttattc ccgattgagc agccaatagg gaataaataa actgcgttca
     5581 tctgaaccat ccaaatctcc cggtccagca atacggtatt gctgagcgat agcgttttta
     5641 ccttcgcata gagtgctata ttcaccgtgc atatcgaata caataagatt agcagctttt
     5701 aaagctgctg cacgttccaa tattaatgca actgaccagc ttttaccgga accagtacta
     5761 cccaaaatag cagcgtgccg ttgaaagaat ttatctccgt ttgctatagc tacagccgtt
     5821 tcatcagcca taaaatgacc taaagtcagc cgttcatttt cttttacgtt agcggacaaa
     5881 agattcataa ataattgcag attgctgcca ctaatatgaa agcaatctct atcaatttgc
     5941 ggaaaacaat ccgctccccg cttaaaagtg ttgctcaaac taccatcaac agctttataa
     6001 gtaccgatta atactgcctt gataaagtca tcctgacttt cacccagagg aatttcaccc
     6061 tcattagata tttcttctag cagcaatttt tcactgatag aacgcgttac ccgttcgata
     6121 atgccgataa ggtactcact agccgttctg ccttgaatcg caatcagatt acccacagca
     6181 atactagtca tttgttgatg ctcttcaaca gaaatcaata cacggctggt atctactgtt
     6241 acaaccctgc ccaaacgggc attgtcttta aaattcaatg tttcatttgc cattctctaa
     6301 aatctctttt acaaaaaact caacgtccca ccaatgaaca ttaggaataa aagtttcttc
     6361 ttgcttgcta accacccttg ttccagcctt atctccatca aaaatcagag ccttacaatt
     6421 cggagcttcc ttcaccacgt ttctggcatt ttctgaaagt cctcttgtca gaagtagtgt
     6481 tttcacacca cttttaattt tgcctgtcaa atgtgtttga aggtggtcat cattaaaacc
     6541 atagccgata cataaaattg aagaagcaga atcaatagct tcatttgctt tttctcgatg
     6601 agcatcaaat ggttgtccat agcctttttt atacttccca acaccaggcg taataattaa
     6661 aggctcttcc actttaccta tacaacttgt cattggaacg tctccagcca taaaccaatc
     6721 taaactacca tgcggtttaa agattttgat atgatctcgt tgacatcctc ccctgcctaa
     6781 aggcagggga ttcctactag ctcccacagc aagctgtggg ctactctcgg tgggtttcta
     6841 ctgctgatct ctattgagat tcacttcata gacgcttcgg gtatgtccta ccctgatatt
     6901 tattatgctt ggactattgc ttgcccacgt gtaagaacat tcattgctcc cactacatcg
     6961 gcattttccg tatagccaca ttctacgcat tcaaaatttt cctgtgtttg gcgattttct
     7021 tttgctgtat agttgcaaca agggcaagta cgactggtat tttgtggagg aactgctagc
     7081 aaaaatccgc ctaaccattg cgttttgtag tccagttgtc gtctaaattc aaaccaagac
     7141 tggtctaata tcactcggtt taagcctgat ttctgtttca catttttgcc gtgtacttcc
     7201 gctgtgcctt tggctgattt ggacatattc gccacttgca aatcttcaac atagatcatc
     7261 gcgtggtttt tgctgatttg cgttgagatt ttatgcagga aatcttttcg gcagttggcg
     7321 attttgtgat gtaacttgcc gattttatct ttcagttttt gccagttttt actgaacttc
     7381 actttatttt ttagctgttt ttgcagtttt gccaattttc ctttgtgggt tttaaacgca
     7441 tttaacggct caaaaaattc tccattggaa agggttgcaa aacgagcaat gcccatatca
     7501 atgccgattt ctccgccttt atgcgtggga atttcctgtt taaattccgt ttgaatgctc
     7561 acaaaaaagc gtccgcattt cattgaaacg gtgacatttt ttacttcccc aacaatttca
     7621 cgactgttgc gataacgcac ccaaccgatt ttcggcagat acaagcggtc gtttttctgc
     7681 tcgattttgc aaccttgcgg aaaacggaaa ctctctttta cgcctttttt cttgaatttg
     7741 ggcaaatccg cacgcttttg aaagaagttt ttaaacgcac tttcaaggtc ttttaacgac
     7801 tgttgaagca cttgtgaatg gcaatcttta agccatacca attctttttt ccattgcgga
     7861 agcaagttgg cgagcttggt ataactgaat ttgtgatggt tatcttgttc gtactgctca
     7921 ttttgccacg ccaatgcctt gttaaacaca aagcgagaac agccgcaaaa ctgcttcatt
     7981 ttgcgaactt gttccccatt tggtctgatt tcaaatttaa aggctttacg tagtaacatt
     8041 gcacgaatta gaatacaaaa attgtgctta ttctacactt ggcctatgaa aaaagaaaca
     8101 gagattagac gtggtcgcca cgttgttttt aacttacacg ttcatttagt tttcgtgact
     8161 aaatatcgca gggaagtttt tactcaagca attttgaacg acttacactc aatttttgca
     8221 acgatttgtg ctgattttga agccacatta gtggaatttg atggtgaaga tgatcacgtt
     8281 catctacttg tggaatatcc gcctaaagtc gctatttctc atcttgtaaa cagtttaaaa
     8341 ggcgtttcga gccgaatgat tagaaagaaa aactatccga gcattcgcaa aaaattatgg
     8401 ggaaatcaac tttggtcacc gtcttacttt gctggtagtt gtggtggtgc accaatatcg
     8461 attattcgcc aatatatcga gcaacaacaa acacctgatt agttagaaat ttgaaacggc
     8521 tttgccgttt ataccttata tccacgccct aaaggacgtg gt
//
LOCUS       DANLZQ010000105         8472 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.105, whole genome shotgun sequence.
ACCESSION   DANLZQ010000105 DANLZQ010000000
VERSION     DANLZQ010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8472)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8472)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8472
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.105"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            10..300
                     /locus_tag="PXE50_002138"
     CDS             10..300
                     /locus_tag="PXE50_002138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623007.1"
                     /translation="MEQLQAVSNEQVFAKLCEVERLLKTKGVNEHSRELWDLGDVAAY
                     FGYTKEHTSRSVVSSPHFPKPIALDGLRGKGRGAKKWVSGEVVKFCLMWKVK"
     gene            complement(570..752)
                     /locus_tag="PXE50_002139"
     CDS             complement(570..752)
                     /locus_tag="PXE50_002139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix protein, CopG family"
                     /protein_id="HDL5623008.1"
                     /translation="MAMSRNEIQAKSEAKRGIKQKSFKLPLEVIAEIEVLSQKLNIPQ
                     NQLIIQAIQQFKQNNP"
     gene            complement(1030..2028)
                     /locus_tag="PXE50_002140"
     CDS             complement(1030..2028)
                     /locus_tag="PXE50_002140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDL5623009.1"
                     /translation="MATIIKNGNKYRAQVRKKGIYKTATFSTKTEANRWAYALEAQID
                     AGEYNTTPNILFAELIDKYLKEVTPTKRGKREERYRLLRIAGSNLGNIPLPALTKEHL
                     RQWQNQRLQEVQPVSVSRERATLSALFTKAMEWDYLKENPLKTLEKIKTPPARTRRYS
                     DEEIDKLIFVSGYSPNQPPLLMQQRAGAALLFAIETAMRAGEIAGLKWEHINLQARTA
                     FLPQTKNGYSRTVPLSTKAIAILNQLAQLEPNKQNSVFQLTSRSLDSNFRKLKQKANL
                     HNADLHFHDTRREALTRLSKYLTVMELAKVSGHRDLSILQNTYYNPDISELVSKLQ"
     gene            complement(2256..2332)
                     /locus_tag="PXE50_002141"
     tRNA            complement(2256..2332)
                     /locus_tag="PXE50_002141"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2296..2298),aa:Val,seq:gac)
     gene            complement(2396..3196)
                     /gene="apaH"
                     /locus_tag="PXE50_002142"
     CDS             complement(2396..3196)
                     /gene="apaH"
                     /locus_tag="PXE50_002142"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
                     ApaH"
                     /protein_id="HDL5623010.1"
                     /translation="MATYIVGDLHGCFNEFQLLLEKVNYNPKQDELFLTGDLVARGED
                     SLACLRFVKDSANNAKTVLGNHDLHLLGIKRVKPNDKIDAIFEAKDRLDLQNWLRNQP
                     LVIHHPKHQFLLTHAGISPEWDLATTLACAKEAEKVLQSDNYADYIAQMYENKPERWS
                     EDLQGVERWRYIINVFTRMRFCYTDKRLDFDCKLPLEQAPQELLAWFDLDNPLFTQKN
                     IIFGHWASLMGKCTRPNIYALDTGCAWGSHLTMLRWEDKQIFTQKRLK"
     gene            complement(3288..5264)
                     /locus_tag="PXE50_002143"
     CDS             complement(3288..5264)
                     /locus_tag="PXE50_002143"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exoribonuclease II"
                     /protein_id="HDL5623011.1"
                     /translation="MFQNNPLLAQLKQQIEASKEYVAGVVKASDKAFGFLECDKKSYF
                     IPPAEMKKVMHGDSVKAVVKRDGDKEQVEIDSLLEPMLDRFIAQVRLNKEGKLQLAVD
                     HPSIKQTIPANTHKKATEKLENGDWVVAQLKTHPLRDDRFFFAQVTQFICKESDNFAP
                     WWVTLARHEQPREPVANEKNYELHDELAREDLSHLYFTTIDSPSTQDMDDALFIEPIK
                     QNGKRTGWRLVVAIADPTAYIPENSHIEKAARQRCFTNYLPGFNIPMLPRELSDDLCS
                     LVPNEKRPALVGFIETDLNGNLIKETTFTSAWVESKDRLAYDDVSDYLEGVENAWQPQ
                     SEETKQQIEWLHQFTQARIQWRAENALLFKEQGDYTFELNEDGSVKDIHVEYRRIANQ
                     MIEESMILANICCAKFLSQHAKTGVFNTHSGFDPKNYELVKSFLLQTLASDENRDELA
                     ERYSAERLATLEGYCQMQRDIQDYPEKFLELRLRRYLTFAEFKAEVAPHFGLGITDYA
                     TWTSPIRKYGDMVNHRLIKQVLLGKQSQAVEESVLSRLQEARRQNRLVERDIADWLYA
                     RYLAPMVEQAVEFECEIADVSRGGLRAKVIKNGAQIFVPFSSLHDNKEEMEYRQEELA
                     LYIKGEKAYQIGQAVKVKLTEVRLETRSIVGNII"
     gene            5424..5702
                     /locus_tag="PXE50_002144"
     CDS             5424..5702
                     /locus_tag="PXE50_002144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000738492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bor family protein"
                     /protein_id="HDL5623012.1"
                     /translation="MKKLLAIATVFSLAACSTQTLELSPAKEAQYDRVQHFFVSGLAQ
                     KQEIDAAKICNGADKVGKVETETTFFNGLLGTITYGIYSPRQIRVYCN"
     gene            5727..6023
                     /locus_tag="PXE50_002145"
     CDS             5727..6023
                     /locus_tag="PXE50_002145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bor family protein"
                     /protein_id="HDL5623013.1"
                     /translation="MKKLLAMSVLTALLTTACTTQTAHIGGKVTDNIKPTKSVTQSFF
                     IGGIGQEETLNVVEVCGSKDKVQQVETVLSGGDILLGLVTIGIYTPRTANVYCK"
     gene            complement(6076..6867)
                     /locus_tag="PXE50_002146"
     CDS             complement(6076..6867)
                     /locus_tag="PXE50_002146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDL5623014.1"
                     /translation="MGILTGKRILVTGLASNRSIAYGIANAMKQQGAELAFTYLNDKL
                     KPRVEEFAKEFGSDIVLPLDVATDESITECFTELSKHWEKFDGFVHAIAFAPGDQLDG
                     DYVNAATREGYRIAHDISAYSFVAMAQAARPFLNENAALLTLSYLGAERAIPNYNVMC
                     LAKASLEAATRVMAADLGKEGIRVNAISAGPIRTLAASGIKNFKKMLSAFEKTAALRR
                     TVTIDDVGNSAAFLCSDLASGVTGEVLHVDAGFSVMAMGELGDEE"
     gene            complement(7011..7784)
                     /locus_tag="PXE50_002147"
     CDS             complement(7011..7784)
                     /locus_tag="PXE50_002147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FNR family transcription factor"
                     /protein_id="HDL5623015.1"
                     /translation="MKIVSEPKTSGRHTCTIHCQNCSISQLCLPFTLNETELTQLDNI
                     IERKKPIQKSQVIFKLGDELRSLYAIRSGTLKAYTLSESGEEQITGFHLPGDLIGFDA
                     ITNMQHEGYAQALETSMICEIPFDILDDLAGKMPKIRHQIMRLMSNEIKSDQEMILLL
                     SKMNAEEKLAAFLYNLSQRYSARGFSAKEFRLTMTRGDIGNYLGLTIETISRLLGRFQ
                     KSGMISVQGKYIIINRMEELAELAGAIKPQQNIIAQTTA"
     gene            8015..8440
                     /locus_tag="PXE50_002148"
     CDS             8015..8440
                     /locus_tag="PXE50_002148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HDL5623016.1"
                     /translation="MYKHILVAVDLSEESLVLVRKGAALAEKCGAKLSLIHVDVNFSD
                     LYTGLIDINMSSVQYSVVEETNTALAELASKVNYPVSECLNGTGDFSQVLEEAVEKHN
                     VDLLITGHHQDFWSKFMSSTRRVMNNITVDMLVVPLADE"
BASE COUNT         2400 a         1563 c         1808 g         2701 t
ORIGIN      
        1 gtggtaaaaa tggaacaatt acaagcggtc agtaatgagc aagtttttgc aaaactttgt
       61 gaggttgagc ggttattaaa aaccaaaggg gtgaatgagc atagccgtga attgtgggat
      121 ttgggcgatg tagcagcata tttcggctac actaaagaac acaccagccg aagtgttgta
      181 tctagtccac attttccgaa accgattgcc cttgacggct tacgaggcaa gggcaggggg
      241 gcgaagaagt gggtatccgg tgaagtggtg aaattttgtt tgatgtggaa ggtgaagtga
      301 tgataaaaaa gataatttta gatgcttgtt gcggtagccg aatgtttcac tttaataagc
      361 acaacccctc ggtattgttt gctgacaatc gggaatccct gtatcgaaaa ttttaaatgt
      421 tatcgaatac caacctatct atgggcataa aagcggtaaa cataacaaaa cgcattggct
      481 ggcatttgta aagatggata ataacgatta tttgtaaagt atttcaaaat acaaaagccg
      541 ataaatttca ttatttatcg gcttttgttt tatgggttgt tttgcttgaa ttgttgaata
      601 gcttgaataa tcagctggtt ttgtggaatg ttgagttttt ggctaagtac ttcgatttct
      661 gcgatcacct caagcggtag tttaaaggat ttttgcttta ttcctcgttt tgcctcgctt
      721 ttagcttgga tttcatttct tgacattgcc ataatttatc cctattataa attttgttga
      781 agagctggga gctttcaccc ccagcgagtt gcttcagatt agtaagctgg ggagctaagg
      841 actaataaga agacaactag gataatgtat ttaaacattg tgctatcctt cttcatttcg
      901 taaggtttaa gccttacgct cactttcaag ctgtctcttg aaagtgaggt tattataatg
      961 tagggtatcc tacattgcaa gtaataaata caaaaaagcc gataaatttt cgtttatcgg
     1021 cttttgtttt tattgcagtt tgctcacaag ttctgaaata tccgggttat agtaggtatt
     1081 ttgcaaaata cttaaatctc gatgccccga tactttggca agctccatta ccgtcagata
     1141 tttagacaaa cgtgtgagtg cctctcgccg tgtgtcgtga aaatgcagat cggcattgtg
     1201 tagattggct ttttgtttca gcttgcgaaa attcgaatca aggctgcgac tggtgagctg
     1261 gaaaacactg ttttgcttgt tcggttcaag ttgtgccaac tgatttaaaa ttgctattgc
     1321 tttggttgag agtggcacgg tgcgtgaata accgtttttg gtttgtggca aaaatgcggt
     1381 gcgtgcctgc aggtttatat gttcccattt taaaccagca atttcacccg ctcgcattgc
     1441 agtctcaatc gcaaataata gtgctgctcc ggctctttgt tgcattaata gcggtggctg
     1501 gttagggctg tagccggaga caaaaatcag tttgtctatc tcctcatcgc tatatcggcg
     1561 agttcttgct ggtggcgttt tgattttttc cagcgttttt agaggatttt ctttgagata
     1621 atcccattcc attgcttttg taaagagtgc cgataaagtg gctctttctc ttgagacgga
     1681 aaccggctgc acttcttgca agcgttggtt ttgccattgg cgtaaatgct ctttggtgag
     1741 tgccggtaat ggtatatttc ccaagttgct gccggcaatt cttagcaggc gatagcgttc
     1801 ttcccttttg ccacgtttgg tcggagtgac ctctttgagg tatttgtcga ttaattcggc
     1861 aaaaagaatg ttcggggtgg tgttatattc tccggcatca atttgagcct ctaaagcgta
     1921 agcccagcgg tttgcctctg ttttggtgct gaaagtggca gttttataaa tgcctttttt
     1981 gcggacttgt gctcggtatt tgttgccgtt cttaataata gtagccattt ttttattcct
     2041 ttgtgtatgt gtgcagttta agtgtgcaaa tgtgtgcaaa ggaatgttaa tagagatcat
     2101 aaacgatcaa taaatatcaa gttttcatat caaaaatgat gtttttattg atgttatgct
     2161 acacttgggg aagtgtttta aatcaataag ctattgattt ataaggggta tttttggggt
     2221 taagcctgaa tggggatatt caggcttaaa aataatggtg cgactagctg gactcgaacc
     2281 agtgaccccc accatgtcaa ggtggtgctc taaccaactg agctatagtc gcattaacgg
     2341 tgtgcattct attggaaaaa ggaacttagt gcaatatgct tttggtcgaa tgcttttatt
     2401 ttagacgctt ttgggtaaaa atttgtttat cttcccaacg gagcatggtt aaatggcttc
     2461 cccaagcaca gccggtatca agtgcataga tgtttggacg agtgcatttg cccattaggc
     2521 ttgcccagtg accaaagata atgtttttct gtgtaaataa cggattatct aagtcaaacc
     2581 aagccagcag ttcttgaggg gcttgttcaa gcggtaattt acagtcaaaa tctaaccgct
     2641 tgtcggtgta gcaaaaccgc atacgggtaa acacattgat gatataacgc caacgttcaa
     2701 caccttgcaa atcttcactc cagcgttcgg gcttattctc atacatttgg gcgatgtagt
     2761 ccgcataatt gtcactttgt agcacctttt ctgcctcttt ggcacaagct agggtagttg
     2821 ctaaatccca ctcagggctg attcctgcgt gagtcagcaa aaattgatgt ttggggtgat
     2881 gaattacaag cggttgattt ctgagccaat tttgcaaatc gagccgatct ttagcctcaa
     2941 aaatagcatc aatcttatca tttggtttta cccgtttgat gccaagcaag tgcaaatcgt
     3001 ggttgcctag cacggttttg gcattgtttg cagagtcttt cacaaaacgt aaacaggcta
     3061 aagagtcctc accacgggcg actaaatccc ctgttaaaaa gagttcgtct tgcttggggt
     3121 tataattgac tttttctaat aaaagctgaa attcgttaaa gcaaccgtgt aggtcgccta
     3181 caatataagt tgccattgtt tctcctttgt tcccctaaag ttataaacaa gcggttatat
     3241 tttagagaaa atttgcaaaa tctcatcaaa atataaccgc ttgaaattta aatgatattt
     3301 cctacgattg agcgggtttc taagcgtact tcggtgagtt tcactttcac cgcttgcccg
     3361 atctgatagg ctttttcacc tttaatataa agtgcaagtt cttcttggcg gtattccatt
     3421 tcctctttgt tgtcgtgcaa gctggagaat ggcacaaaaa tttgagcacc gttttttatg
     3481 actttcgcac gcaagccacc acgggaaaca tctgcaattt cgcactcaaa ttcgaccgct
     3541 tgttccacca ttggggcaag gtaacgagca taaagccagt cagcaatatc acgttctact
     3601 aaacggtttt gacggcgagc ttcttgtaaa cggcttaaaa ctgattcttc caccgcttgg
     3661 ctttgtttgc caagtaacac ttgcttgatt aaacggtggt ttaccatatc gccatattta
     3721 cggatgggtg atgtccaagt ggcgtaatcg gtaatgccta gtccgaaatg cggggcaact
     3781 tcggctttaa attcagcgaa ggttaaataa cgtcgtaaac gcaactctaa gaatttctct
     3841 gggtagtctt gaatatcacg ttgcatttgg caatagcctt ctaaggttgc taaacgctcg
     3901 gcggagtagc gttcggcaag ctcatcacga ttttcatcgc tggctaaagt ttggagtaaa
     3961 aatgatttta ccaattcata atttttcgga tcaaaacctg aatgggtatt aaatacaccg
     4021 gttttggcat gttggcttaa gaattttgca caacaaatat tggcaagaat cattgattct
     4081 tcgatcattt gattcgcaat acggcgatat tcaacgtgaa tatcttttac cgagccatct
     4141 tcatttaact caaaggtata atcgccttgt tctttgaata gcaacgcatt ctcggcacgc
     4201 cattgaatgc gggcttgagt aaattgatgt agccactcaa tttgttgttt tgtttcttca
     4261 gactgaggtt gccacgcatt ttccacgcct tcgagataat cggaaacatc gtcgtaagcc
     4321 aagcgatctt ttgattcgac ccaagcagag gtaaaggttg tctctttaat gagattgccg
     4381 tttaaatcgg tttcaataaa gccaacgagg gcagggcgtt tttcattcgg gacaagcgaa
     4441 cagagatcgt ctgagagttc tcgaggtaac attggaatgt taaagcccgg caaatagttg
     4501 gtgaaacaac gctggcgagc ggctttttca atatgggaat tttctgggat ataagcggtt
     4561 gggtcagcaa tcgctaccac taaacgccag ccggttcgct tgccattttg cttaattggt
     4621 tcgatgaaca gagcatcgtc catatcttgc gtgcttgggc tgtcaatagt ggtaaagtaa
     4681 agatgagata aatcttcacg agctaattca tcgtgtaatt catagttttt ttcatttgcg
     4741 accggttcac gaggctgttc gtggcgggca agtgtgaccc accaaggggc aaaattatca
     4801 gattctttac agataaattg ggtaacttga gcaaagaaaa aacggtcgtc acgcaatggg
     4861 tgcgttttta attgtgcaac cacccagtcg ccattttcta atttttcagt ggctttttta
     4921 tgggtatttg ccgggatagt ttgcttaatg cttgggtgat caaccgcaag ttgcaatttg
     4981 ccctctttat tcaagcgaac ttgggcaata aatctatcca gcattggctc aagtagtgaa
     5041 tcaatttcta cctgttcttt gtcgccatca cgtttgacta cggctttcac tgaatcaccg
     5101 tgcattactt ttttcatttc cgcaggtgga ataaaatagc tttttttatc gcattctaaa
     5161 aaaccgaatg ctttgtctga ggctttgaca acgcctgcga catattcttt gcttgcttca
     5221 atttgttgtt tgagttgggc taaaagggga ttgttttgaa acataatttc tcattttaaa
     5281 aataaaaaaa ggtgctatcg ttgcaccgaa aaaaacaatg gcattataac ggatttgaac
     5341 caagttcagc aaataaatgc tgttgctata acttataaag gttggtagaa tataatccat
     5401 ttaaaaataa tggagacttt tcaatgaaaa aattacttgc aattgcaaca gtattttctt
     5461 tagcagcctg ttctactcaa acacttgaac tatctcctgc taaggaagct caatatgatc
     5521 gtgttcaaca cttctttgtt tcagggcttg ctcaaaaaca agagatagat gcagcaaaaa
     5581 tttgtaatgg tgcagataag gtaggtaagg tagaaactga aactactttc tttaatggct
     5641 tgttaggtac aattacttat ggtatctatt cacctcgcca aatccgtgta tattgtaact
     5701 aatcctagta atttaaggag ttgaaaatga aaaaattgct tgctatgtct gtattaacag
     5761 ccctgctgac tacagcatgt acaacacaaa ctgcccatat tggcggcaaa gttactgata
     5821 atattaaacc aactaagagt gtaactcagt cgttctttat aggtgggatt gggcaagaag
     5881 aaacattgaa tgttgtagag gtttgtggtt ccaaagataa agtgcagcag gttgaaacag
     5941 tactttcagg tggggacatt ctattaggtc ttgtgactat cggtatttat acacctcgta
     6001 ctgcaaatgt atattgtaag taatatttta ttaaaaaaat aacggactca attgagtccg
     6061 ttatttttat aggaattact cttcgtcgcc taattcaccc attgccatta cgctgaagcc
     6121 ggcatcaacg tgtaacactt cacctgttac accagaggct aaatctgagc ataagaaagc
     6181 tgcagagtta cctacatcat caatagttac ggtgcggcgt aaagcagcgg ttttctcgaa
     6241 agcagaaagc attttcttga agtttttaat gcctgaagca gctaatgtac ggatcgggcc
     6301 ggctgaaatc gcatttacac gaataccttc tttacctaaa tcggctgcca ttacacgggt
     6361 tgcagcttct aaagaggctt tggctaagca cattacattg tagttgggga ttgcacgctc
     6421 tgcacctaag taacttaagg ttaaaagggc ggcattttca tttaagaagg ggcgagcagc
     6481 ttgagccatt gcaacaaagc tataggcact gatgtcgtgt gcaatacgat aaccttcacg
     6541 ggttgcggca tttacataat cgccgtctaa ttgatcgccc ggtgcaaatg cgatagcgtg
     6601 aacaaaaccg tcaaattttt cccaatgttt gcttaattca gtaaagcact cagtaatgct
     6661 ttcatcggtt gctacatcta acggaaggac aatgtctgag ccaaattctt tggcaaattc
     6721 ttcaactcgt ggttttaatt tatcgtttaa gtaggtgaat gcaagttctg caccttgttg
     6781 cttcattgcg tttgcaatac cgtaagcgat cgaacggttg cttgctaaac ctgtcactaa
     6841 aatacgttta ccagttaaga tacccataaa aattcctctt ttatattgat tggggcaaaa
     6901 ttgtgtcgat tataacggat ataggaaaaa cgggcaaatg gagttagcgg ctcatcggat
     6961 cagaaatccc tttttgaacg aggtttcaaa aagggatttg gtaagataaa ttaagcggta
     7021 gtttgagcaa taatattttg ctgcggtttg attgccccgg ctaattcggc taattcttcc
     7081 atacggttaa taataatata ttttccttgt actgaaatca taccgctttt ttggaaacgc
     7141 cctaataaac ggctgatagt ttcaatggtt aaaccaagat aattgccgat atctccacgg
     7201 gtcatagtta gacggaactc ttttgcagag aaaccacggg ctgagtaacg ttgggaaaga
     7261 ttatacaaaa atgcagctag tttttcttcc gcattcattt ttgagagcaa tagaatcatt
     7321 tcttgatcgc ttttaatttc attactcatc aaacgcataa tttgatggcg aatttttggc
     7381 attttgccgg caagatcatc taaaatatcg aatggaatct cacaaatcat tgaggtttcg
     7441 agtgcttgag catagccttc gtgctgcata ttggtaattg catcaaagcc aattagatcg
     7501 ccaggtaaat ggaaaccggt aatttgctct tcaccacttt cacttaaggt ataggctttt
     7561 aatgttccag aacggatagc ataaagcgaa cgcagttcat cacctaactt aaaaataact
     7621 tgcgattttt gaatcggttt tttacgctca ataatattat ctagttgagt taattccgtt
     7681 tcattaagag taaaaggtaa gcatagttgg ctaatactgc aattttgaca atgaattgtg
     7741 caagtatgac gtccgcttgt tttaggttct gatacaattt tcatccattc aaccttaaat
     7801 tagaaaagta ttcctaaatt tgatttagaa caaagtttac cattaaattt acatgaagca
     7861 aagtatacca aggaaaaata aaaatactta caaagaggta tgaaaaatat aatcaaattt
     7921 ttatttttga gatctacttc aagtttttat caaaaagagt gtgttagtat gtttatacac
     7981 aaagtaaaca actctcacaa gcaaggagca tattatgtat aaacatatct tagttgcagt
     8041 ggatctttct gaagaaagtc ttgttttagt gcgtaagggg gctgcgttag cagaaaaatg
     8101 cggagctaaa ctttccctca ttcacgttga tgttaatttt tcggatctct atacaggatt
     8161 aattgatatt aatatgtctt cggtacaata cagtgttgtt gaagaaacaa atacggcact
     8221 ggctgaactt gcctcaaaag taaattatcc tgtatctgaa tgtttaaacg gaacgggaga
     8281 ttttagtcaa gttttggaag aggccgtaga aaaacacaat gtcgatttac tcatcactgg
     8341 ccatcatcag gacttctgga gtaaatttat gtcttcaact cgtcgagtca tgaataatat
     8401 cactgttgat atgctggttg tgccattagc agatgaatag caagaaagtg aatgaaaaat
     8461 aaccgcttga ga
//
LOCUS       DANLZQ010000106         8332 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.106, whole genome shotgun sequence.
ACCESSION   DANLZQ010000106 DANLZQ010000000
VERSION     DANLZQ010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8332)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8332)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8332
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.106"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(405..2075)
                     /gene="glnS"
                     /locus_tag="PXE50_002149"
     CDS             complement(405..2075)
                     /gene="glnS"
                     /locus_tag="PXE50_002149"
                     /EC_number="6.1.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase"
                     /protein_id="HDL5623017.1"
                     /translation="MSEEILTAETGTRANFITHIIDEDLASGKHNNVYTRFPPEPNGY
                     LHIGHAKSICLNFGIAQDYNGLCNLRFDDTNPVKEDVEYVDSIKQDVEWLGFKWEGEP
                     RYASDYFDQLYGYAIELINKGLAYVDELSPDEMREYRGTLTEPGKNSPYRDRSVEENL
                     ALFEKMKNGEFAEGKACLRAKIDMASPFIVMRDPVLYRVKFAHHHQTGDKWCIYPMYD
                     FTHCISDAIERITHSLCTLEFQDNRRLYDWVLDNISIERPLPHQYEFSRLNLEGTLTS
                     KRKLLKLVTDGIVDGWNDPRMPTISGLRRRGYTPASLREFCRRIGVTKQDNVVEYSAL
                     EACIREDLNENAPRAMAVINPVRVVIENFGEKEILKAPNHPNRPELGERDLPFTREIY
                     IDEADFREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDASGRISTIFCTYDPDTLGK
                     NPADGRKVKGVIHWVSAEDNKPAEFRIYDRLFTVPNPGAEEDINAVLNPESLVVKHGF
                     VESSLAHAKPEQDYQFEREGYYCLDSKDGSADNLVFNLTVSLKESVAF"
     gene            complement(2236..2679)
                     /locus_tag="PXE50_002150"
     CDS             complement(2236..2679)
                     /locus_tag="PXE50_002150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HDL5623018.1"
                     /translation="MNLQQIQDRLALKDLVDTFSNLADEKKVAEQMPLFTQDAVVNTY
                     IGGKLVFEMHGVAEIEQVFTTFLTPFHSVYHLNGQHTVPFIDENNATAINYCAVKLVE
                     TKEGKEILHDHSVRYADTYVKQEGKWRIAKRIANFMISESREIRQ"
     gene            complement(2730..3305)
                     /locus_tag="PXE50_002151"
     CDS             complement(2730..3305)
                     /locus_tag="PXE50_002151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HDL5623019.1"
                     /translation="MKQILILGASGSLANVVIPELLKDNNVQLTLFARRPQSVAKFET
                     ERVKIVQGDVLDFHALTQAMQGVDAVYAGLAGDLKAMAGNVVNAMNEAQVKRLVWISS
                     MGIYGETGEDHGAILEPYRQSAAVIEASELDYTVVRPGWFTNGSEVQYQLTHKGEPFK
                     GHSVSRKSIADFVARILRENSEIRESVGIAA"
     gene            3412..4302
                     /locus_tag="PXE50_002152"
     CDS             3412..4302
                     /locus_tag="PXE50_002152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL5623020.1"
                     /translation="MKENLNDLRAFLLVAQTSSFTKAAAQMGVSQSALSHSIRGIEER
                     LQIKLFHRTTRSISTTEAGERLYQRLLPLFDEIDQEVNGLSEFRNALKGGLRINGNEH
                     VFRDVLADKFAEFVKRYPEVALELVAEDRFVDIVAERFDAGIRLGADVAKDMIALRIS
                     PDVKMTAAASPNYLAQHGTPKTPFDLTEHHCLKHRLATLGGILAWEFRDPITKKIVKF
                     QPQGNLTANNGFLLQHYAKQGLGILWSPQDSIQTELDNGSLVPILTDWAMQYEGYHLY
                     YPNRRQNSPLLKALIDVLRG"
     gene            complement(4369..4935)
                     /gene="efp"
                     /locus_tag="PXE50_002153"
     CDS             complement(4369..4935)
                     /gene="efp"
                     /locus_tag="PXE50_002153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004871142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HDL5623021.1"
                     /translation="MASYSTNDFKKGLKFIQDGEPCVIVENEFVKPGKGQAFTRTKIR
                     KLISGKVLEINFKSGTSVEAADVVDSNYNYSYSDGDFWYFMHPETFEQISVDEKALGD
                     NVKWLVDNAECIVTLWNGSAIAVTPPNFVELEIVETDPGLKGDTAGTGGKPATLSTGA
                     VVNVPLFVQIGEVIRVDTRSGEYVSRVK"
     gene            5102..5671
                     /locus_tag="PXE50_002154"
     CDS             5102..5671
                     /locus_tag="PXE50_002154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623022.1"
                     /translation="MKKLITLSAILAVSVATVAEAKRGGGSFRSVSPSKAVATKPVAS
                     QKSTTNQQTQQKDATFANTPNSATAQPQVRQGSTMANVAMGAAAGYILGDMMSSNAHA
                     NQPSQPADANAQAVNSAQNVANGAVPAIAEFKSIGGQIDPFLVEKTDGYRRYCISGVQ
                     YLVAAQGVQTSPTVMVNPNGTPLQCNLIP"
     gene            5725..6717
                     /gene="epmB"
                     /locus_tag="PXE50_002155"
     CDS             5725..6717
                     /gene="epmB"
                     /locus_tag="PXE50_002155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P beta-lysylation protein EpmB"
                     /protein_id="HDL5623023.1"
                     /translation="MQPIQIKPLWLTELAQAFNNPIDLLQFLELNPNDFEGDIAARKL
                     FALRVPRMFAEKMEKGNPNDPLFLQAMSLQAEFIEAEGFVVDPLEEQQSPAPNILHKY
                     HNRLLFMLKNSCAINCRYCFRRHFPYEEVKSGKAVWQQGLTYIAEHPELEEVILSGGD
                     PLMAKDQDLDWILTQLEQISHIKTLRIHSRLPVVIPNRITTELCERLSKSRLNVVLVT
                     HINHANEIDAVFANKMAQLKKAGVVLLNQSVMLKGVNDNAQTLKRLSDKLFEYGILPY
                     YLHLFDKVAGASHFYIEDEQAGEIYRELQRITSGYLVPKLAREIAKEPNKILKG"
     gene            complement(6817..8220)
                     /gene="asnS"
                     /locus_tag="PXE50_002156"
     CDS             complement(6817..8220)
                     /gene="asnS"
                     /locus_tag="PXE50_002156"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012054399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HDL5623024.1"
                     /translation="MSKFPTVSEILSGKIAVGEEATVRGWVRTRRDSKAGLSFLSVYD
                     GSCFDPIQAIINNDLPNYNAEVLHLTAGCSVVVTGKVVESPAEGQAVELQASKVEVLG
                     WVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFHEQGFYW
                     VATPVITASDTEGAGEMFRVSTLDLENLPRGENGKVDFNQDFFGKESFLTVSGQLNAE
                     TYACALSKVYTFGPTFRAENSNTTRHLAEFWMMEPEVAFADLNDNAKLAEDMLKYVFK
                     AVLAERKDDMEFFVKHVDKEAISRLENFINSPFAQVDYTDAIEILLKSGKEFEFPVSW
                     GIDLSSEHERFLAEEHFKSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEII
                     GGSQREERLEVLDQRMNEMGLNPEDYWWYRDLRKYGTVPHSGFGLGFERLIVYVTGLQ
                     NIRDVIPFPRAPRNANF"
BASE COUNT         2389 a         1786 c         1729 g         2428 t
ORIGIN      
        1 agattagatt acgattttat ttctaatcag atcttatcta ttcttcgaga agacaatgct
       61 atcataaaag agcatcactt ttggtttcca aagattatag aaagctcaaa taatacacta
      121 cctcataatt taaaatgaaa cgtttcaatt ggaaaaagtg gattttgtga ctgagatcac
      181 aaatttaaac attggtctgt atttttgaga gattttgttt gaaactgccg gcaaattcgc
      241 ttaaccttaa ggtaacaaga ataagtgttg tacctagcaa cctaacacat aaatttgctt
      301 tccgagtggc cccaagaatt ggggcttttt ttatgcttga tgagtcgttt tgagagtaaa
      361 aaaataccag catatttgct ggtatttgaa tgaagagagt tagattagaa cgctacgctt
      421 tcttttaagc tgacagttaa gttaaataca aggttgtctg ccgaaccatc tttgctgtct
      481 aagcagtagt aaccttcacg ctcgaattgg tagtcttgtt ccggtttggc gtgagctaaa
      541 cttgactcaa caaaaccatg cttaaccact aatgattcag gatttagcac cgcattgatg
      601 tcttcttccg cccccgggtt tggtactgta aataggcggt cgtaaatgcg gaactctgcc
      661 ggtttgttat cttcagcaga tacccaatga atcacgcctt ttactttgcg accatcagcc
      721 ggatttttgc ccaatgtatc cgggtcgtat gtgcaaaaaa tagttgaaat tcgaccgctt
      781 gcatcttttt ccacacgctc agctttaatc acataggcat tgcgtaaacg aacttctttg
      841 cctaagacta aacgtttata ttgcttattg gcttcttcac ggaagtcggc ttcatcaata
      901 taaatctcac gggtgaacgg taaatcacgc tcgccaagct ctggacgatt tgggtgatta
      961 ggggctttta atatttcctt ttcaccgaag ttttcaatca ccactcgaac cgggttaatc
     1021 accgccatcg cgcgtggtgc gttttcattt aagtcttcac gaatgcacgc ttcaagggca
     1081 gagtattcca ccacgttatc ttgcttggtt accccaatac ggcgacaaaa ttcacgtaaa
     1141 gacgctgggg tataaccacg gcggcgtaag ccggaaatgg ttggcatacg agggtcattc
     1201 caaccatcaa caatgccgtc tgtgactaat tttaataatt tacgcttaga ggttaaagta
     1261 ccttctaaat ttaaacgtga aaattcgtat tggtgcggta acggtctttc aatcgaaata
     1321 ttgtccagca cccaatcata taagcggcgg ttatcttgga actctagcgt acatagcgag
     1381 tgagtgattc gctcaatcgc atcggaaatg cagtgggtaa aatcgtacat cgggtagatg
     1441 caccatttat caccggtttg atgatggtga gcaaatttca cacggtaaag caccggatct
     1501 cgcatcacaa taaacgggga cgccatatca atttttgctc tcaagcaggc tttcccttcc
     1561 gcaaactctc cgtttttcat tttttcgaat aacgctaagt tttcttccac gctacgatca
     1621 cggtaagggc tgtttttgcc cggctcggtt aaagtaccac ggtattcacg catttcatca
     1681 ggcgataatt catcaacata ggctaatcct ttgttgatta actcaatcgc atagccataa
     1741 agctggtcaa aatagtctga ggcataacga ggctcaccct cccatttaaa acctagccac
     1801 tccacatctt gcttaattga atctacatat tccacgtctt ctttaaccgg gttggtatca
     1861 tcaaaacgca agttacataa accgttataa tcttgagcga taccaaaatt taaacagata
     1921 gatttagcgt gtccgatatg caaataaccg tttggttcag gtggaaaacg agtgtaaaca
     1981 ttgttgtgct ttccgcttgc taaatcttca tcaataatat gggtaataaa attggctcga
     2041 gtgccagttt ctgccgttaa aatttcttcg ctcatagttc tctctaaatg tatcaataaa
     2101 aataacggat tattctacac ttaattgaaa cagacttaaa gactaaagca aaattcctcg
     2161 gtttcctcca aagaattttg ctgttttagt aagatgcaat ggaattgcaa atttttagct
     2221 aaatttaacc gcttgttatt gcctgatttc acggctttcg ctgatcataa aattcgcaat
     2281 ccgtttggca atccgccatt taccctcttg tttaacatag gtatcggcat aacgcacgct
     2341 gtgatcgtgc aagatctctt tgccctcttt ggtttctacc agtttcaccg cacaatagtt
     2401 gatcgctgtg gcgttatttt catcaataaa aggcacggta tgctgaccgt ttaaatgata
     2461 aacgctgtga aacggggtta aaaaggtggt aaacacctgt tcgatttctg ccacgccgtg
     2521 catttcaaac accaattttc cgccgatgta ggtgtttacg acggcatctt gcgtgaaaag
     2581 cggcatctgc tcggcaacct ttttttcatc ggcaaggtta gagaatgtat ctactaaatc
     2641 ttttagtgct aaacgatctt ggatttgttg taagttcatt gtgttttcct tctgattttt
     2701 gcaaattttc tttggttttt caccgcttgt taggctgcaa taccaacact ttcacggatt
     2761 tcgctgtttt cacgcaaaat gcgagccaca aaatcggcaa tggatttgcg ggaaacgctg
     2821 tgtcctttga acggttcgcc tttgtgagtc agctgatatt gcacttccga accgttggta
     2881 aaccagcccg ggcggacaac ggtataatcc aactcgctgg cttcaatcac ggctgccgat
     2941 tggcggtaag gctctaaaat tgccccgtga tcttcgccgg tttcgccata aatccccatt
     3001 gagctaatcc aaaccaagcg ttttacctga gcttcattca ttgcgttcac cacatttccc
     3061 gccatcgctt ttaagtcgcc ggcaagtcca gcgtaaacgg catcaacgcc ttgcattgct
     3121 tgggttaatg cgtggaaatc caacacatcg ccttgcacaa ttttgacgcg ttcagtttca
     3181 aatttcgcta ctgattgcgg acgacgggca aaaagggtta attgcacatt attgtctttt
     3241 agcagttcag gaatcacgac attcgctagg ctaccgcttg ctcctaaaat taagatctgt
     3301 ttcattgctg ttctccattg aatgaagtca gtatagcggt gtagattgca tttgattagt
     3361 agggtaaaat cgcttgaagt aatgagaaaa attcattaat aaggtggtta aatgaaagaa
     3421 aacctcaacg atttaagagc ttttttgttg gtagcacaaa cgagcagttt taccaaagca
     3481 gcagcacaga tgggcgtgtc gcagtcggcg ttgtcgcaca gcattcgggg gattgaagaa
     3541 cggttgcaaa tcaagctgtt tcatcgcacc actcgtagca tttcaaccac cgaggcaggg
     3601 gagaggctgt atcaacggct gttaccgctg tttgatgaaa tcgaccaaga agtaaatggg
     3661 ctgagtgagt ttcgcaatgc gttaaaaggc gggctgagaa ttaacggtaa tgaacacgtt
     3721 ttccgtgatg tgctggcaga taaattcgct gagtttgtca aacgttaccc tgaagtagca
     3781 ttggagctag tggcggaaga tcgctttgta gatattgtcg ccgagcgttt tgatgccggt
     3841 attcggcttg gggcagatgt ggcgaaagat atgattgcac tacgcatttc gcccgatgtg
     3901 aaaatgaccg cagctgccag ccccaactat ttggcacagc acggcacgcc gaaaacgccc
     3961 tttgatttaa ccgaacatca ttgtctcaaa catcgtcttg cgacattggg cggcattctg
     4021 gcgtgggaat ttcgggatcc catcaccaag aaaatcgtta aatttcaacc gcagggcaat
     4081 cttactgcca ataacggctt cttgctgcaa cactatgcca aacaaggttt aggcattctt
     4141 tggagtccgc aagacagcat tcaaaccgag ctggataacg gcagcctcgt gccgatttta
     4201 accgactggg caatgcagta tgagggctat catctctatt accccaaccg tcgccaaaat
     4261 tcgcctttgc tgaaagcgtt aattgatgtg ctgagaggat aggtaaaaat gagcggtcgt
     4321 ttttagcaaa aaattgacca aaaaacgacc acttgtagag aagctaaatt atttcacacg
     4381 agaaacatat tcgcctgaac gggtatccac acggataact tcaccgattt gaacgaataa
     4441 aggcacgttt accacagcac cggtgcttaa tgttgccggt ttaccgcctg tacctgcagt
     4501 atcgcctttt aagcccgggt cggtttcgac gatttctaac tcaacgaagt ttggtggtgt
     4561 gactgcaatt gctgaaccgt tccataaagt cacgatacat tctgcattat caactaacca
     4621 ttttacgttg tcgcctaacg ctttttcatc taccgagatt tgttcaaagg tttcagggtg
     4681 cataaagtac cagaaatcac catcgctgta agagtagttg tagttagaat ctactacatc
     4741 tgctgcttca accgaagtgc ctgatttgaa gttgatctct aatactttgc cagagattaa
     4801 tttacggatt ttagtacggg taaatgcttg acctttaccc ggttttacga attcgttttc
     4861 aacaattaca caaggttcgc catcttgaat aaattttaaa ccttttttaa agtcgttagt
     4921 gctgtagcta gccattattt cctcaattat ttaaaaaata acaataaatt aacaaatttt
     4981 gaacccaacc ctattgggtt tgtcaaaaag agccatataa taacctaaat tcacaaaatt
     5041 agcgaaagat ctcttgcgat ttttgctata atttttcaaa ctttattgat aaggaatgcg
     5101 aatgaaaaaa ctgattactc tttctgcgat tttagccgtt tctgttgcaa ccgtggcaga
     5161 ggcaaaacgt ggcggtggga gcttccgttc agttagcccg tcaaaagcgg tagcaactaa
     5221 gccggtagct tctcaaaaat caaccacaaa tcagcaaacg caacaaaaag atgctacttt
     5281 tgccaatacg ccaaacagtg caactgccca gccacaagtg cgtcaaggca gcacgatggc
     5341 aaatgtagcg atgggggcag cagccggtta tattttaggt gatatgatgt catcaaatgc
     5401 acatgcaaat cagcctagcc agcctgcgga tgcaaatgca caagcggtca attctgcaca
     5461 aaatgttgca aatggagcag ttcctgctat tgcagaattt aagagtattg gcggtcaaat
     5521 cgatccgttt ttagtagaaa aaaccgatgg ttatcgccgt tattgtattt caggcgtgca
     5581 atacctagtc gctgcacaag gtgtacaaac ctcaccaact gtaatggtta atccaaatgg
     5641 cacgccatta caatgtaact taattccata attattttta tttgcgggca ggcaaaaacc
     5701 tgccccttgt atctacaata ttcaatgcaa ccaattcaaa tcaaaccgct ttggctaacc
     5761 gagctggctc aagcctttaa taaccctatc gacttattac aatttcttga actcaatcca
     5821 aatgattttg agggcgatat agctgcccgt aaattatttg ctcttcgagt gccaagaatg
     5881 ttcgccgaaa aaatggaaaa gggtaaccca aacgatccgc tttttttgca agcaatgtct
     5941 ttacaggcgg aatttattga ggcagaaggg tttgtggtag atccattgga agagcaacaa
     6001 agcccagcac cgaatatttt acataaatac cataaccgtt tgttatttat gctaaaaaac
     6061 agttgtgcga ttaactgccg ttactgtttt cgccgtcatt tcccttatga ggaagtgaaa
     6121 agcggtaaag ctgtgtggca acagggacta acttatattg ctgagcatcc cgagctggag
     6181 gaagtgattc tgtccggtgg tgatccgctg atggcaaaag atcaggactt agattggata
     6241 ttaacgcaat tagagcagat ttcgcatatc aaaaccctgc gtattcattc acgcttgccg
     6301 gtcgttattc ccaatcgaat tacgacagaa ttatgtgaac ggttatcaaa atctcgcttg
     6361 aatgtcgtgt tggttaccca tattaatcac gccaatgaaa ttgatgctgt ttttgcaaac
     6421 aaaatggctc aactgaaaaa agccggcgtt gtattgctga atcaatcggt gatgttaaaa
     6481 ggtgtaaacg ataatgctca aaccttaaaa aggttaagtg ataaactttt tgaatatggg
     6541 attttgcctt actatttgca tttatttgat aaagtggcag gggcgagcca tttctatatt
     6601 gaagatgaac aggctggtga gatttaccga gaattacagc gtatcacttc aggctatctt
     6661 gtgccaaagc tggcaagaga aatagcgaaa gagccaaata aaattttgaa aggttagctt
     6721 aaacagaaat caagaaacaa aaggcgaaaa tggtaaaatt ttcgcctttt ttaaccgctt
     6781 gttgcaagcg gttaaattct cttacttttt tgcaaattag aagttcgcat tgcgtggagc
     6841 acgtgggaat gggattacat cacgaatgtt ttgtaacccg gttacataca cgattaaacg
     6901 ctcgaaacct aaaccgaaac ctgagtgtgg cactgtaccg tatttacgca aatcacgata
     6961 ccaccagtaa tcttcagggt ttaagcccat ttcattcata cgctgatcta acacttctaa
     7021 acgttcttca cgttgagaac caccgataat ttcaccgatt cccggagcta aaacgtccat
     7081 tgcggcaacc gttttgccgt catcatttaa acgcatatag aaggctttaa tgtcttttgg
     7141 atagtttttc acgaccaccg gcgatttaaa gtgttcttcg gctaagaaac gctcgtgttc
     7201 agaggaaaga tcgattcccc aagacaccgg gaattcaaat tctttgccgg atttcaataa
     7261 gatctcaatc gcatcggtgt aatctacttg agcaaatggc gaattgataa agttttctaa
     7321 acgactaatc gcttctttat caacgtgttt aacgaaaaat tccatatcat ctttacgttc
     7381 tgcaagcacc gctttaaaca catatttcag catatcttcg gctaattttg cattgtcgtt
     7441 taagtcggca aaggcaactt ccggctccat catccagaat tctgcaagat ggcgagttgt
     7501 gtttgagttt tctgcacgga atgtcggacc gaaagtataa actttactta aggcacacgc
     7561 ataggtttcc gcatttaact ggccggatac ggttaagaac gattctttac cgaagaaatc
     7621 ttggttaaaa tccactttgc cgttttcgcc acgaggtaga ttttctaaat ccagcgtaga
     7681 aacacggaac atttcacctg caccttcagt atctgaggcg gtaattacag gtgttgctac
     7741 ccaatagaaa ccttgctcgt ggaagaaacg gtggatagct tgagctaaac agtgacgaac
     7801 acgagcaact gcaccgatta agttcgtacg agggcgtaag tgagcgactt cacgcagata
     7861 ttcgatagag tggcgtttcg ctgccattgg gtaggtatca ggatcttcca cccaaccaag
     7921 cacttccact ttacttgctt gtaattcaac ggcttgacct tcagcagggg attccacaac
     7981 tttaccggtc accaccacag agcaacctgc ggttaaatgt aatacttcgg cattataatt
     8041 tggtagatcg ttattaataa tcgcttgaat tgggtcaaag caagaaccat cgtaaacgct
     8101 caagaaagat aaaccggctt ttgaatcacg gcgggtacgc acccaaccac gcactgtcgc
     8161 ttcttcacct accgctatct tgccggatag gatttccgaa actgttggaa atttagacat
     8221 tgaatacctc aaattctttg ttgtgagttt taatataaga aacgttccgt attctacaag
     8281 aaaatagggg gaaatataat aattttacgg aattatttgc aaatttgtga gt
//
LOCUS       DANLZQ010000107         8324 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.107, whole genome shotgun sequence.
ACCESSION   DANLZQ010000107 DANLZQ010000000
VERSION     DANLZQ010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8324)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8324)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8324
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.107"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            19..3177
                     /locus_tag="PXE50_002157"
     CDS             19..3177
                     /locus_tag="PXE50_002157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HDL5623025.1"
                     /translation="MITINENTIEQSAIATLQSLGWDYTYGKKILAGLEHEWRERTAE
                     VILKPLLAQAIAKFNPNLPACEVENVVAQVCRADSGDLAERNRQAYDWLRNGVKITYQ
                     LYGEQVSDVVQLIDFQRPENNDFRIVNQLDISGKKGKRIPDLIGFVNGLPLVVFELKN
                     PLKENADIGKAFAQLQTYKDEISDLFVFNQALVISDGIVARIGSLTADFDRFTPWRVV
                     DEKNQSKRIVFEDELTALLQGVMTPKNLLDYVQNFVVFERDGKNRLIKKIGAYHQFYG
                     VNEAVDCTLLAATGNRKIGVFWHTQGSGKSLSMLFYAGKVLSQSSLKNPTLVLVTDRN
                     DLDGQLYATFCGGEALLKQTPIQADGRDELRSALASRSAGGVIFTTIQKFGLMEGELA
                     HPVLNERENIIVITDEAHRSQYGFSQKINHKGEYREGYAKHLRSALPNASFIGFTGTP
                     IELDDKDTQEVFGKYVSIYDFEDAVEDGATVPIIYEPRQISLGESGEFSKVMEEAQQL
                     IDDDENSYNFRLREKLHSVDSRLQKMAEDIIAHYDERTKQQDGKAMVVVMSRAICVKL
                     YEKITALRPEWHSNDVLQGSIKIVMTSNASDPAEWQKHNQDKKTLEKRFKDPDDPLNI
                     VIVRDMWLTGFDAPCCNTMYIDKPMSGHNLMQAIARVNRVFRNKSRENGGLIVDYVGL
                     TDELEKAMKQYTNAGGKEKPVRDISAVLEKMVEHITVIRGQFATPIDGQAVDIAKMLQ
                     ISEPPKLLNAILTSANHILALDRIQPPDNTAKDKTPRKNAFLQSVRLAKKGYALCGAL
                     KAVEPYKQELAFYDAVRATIIKNSTAPRNSSSENDRLLQLTALMNRAVQSDGVVDLFD
                     LLKKDRPNINLLSDEFLETVKNSPTKDLWLSAMERYLASQLREQSGANLATKKAFEQK
                     LKEAMNQYHNHNLSVLEILEELIALAKEFEARQKRGEALGLSPAEMAFYDALARNESA
                     VREMGDEVLMKLAKDITDKLRKSVTVDWQYKDSVRAKMRTLIRIALRTYKYPPDLQAE
                     AIEFVLQQAEEIAGEFAITETA"
     gene            complement(3211..6102)
                     /gene="glnE"
                     /locus_tag="PXE50_002158"
     CDS             complement(3211..6102)
                     /gene="glnE"
                     /locus_tag="PXE50_002158"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HDL5623026.1"
                     /translation="MLTTLIPLSQLNLPPNLQNSEQIQPLVTAISLSNFVHQTLQKQP
                     DLLAEWLAKFPTPDDCCNYTERLAKILARVENEEMLGRVLRQFRHRELARLSFIQSNK
                     LATVELVFQHLSDLAESLILAARDWLFQRCCAEYGTPKNTLGETQELLILGMGKLGGR
                     ELNFSSDIDLIFTYPDIGETEGGRKSIENSKFFTRMGQRLIKVLDEITADGFVYRTDM
                     RLRPFGDSGALVLSFTAMEDYYQEQGRDWERYAMIKAKILGEDSQNLNHRYLKQMLRP
                     FVYRRYLDFSAIQSLREMKEKISREVVRRNLTDNIKFGAGGIREVEFIAQTFQMIRGG
                     RDKILQERSLLKVLPRLAELNLLTQTQVETLHNAYIFYRQIENVLQAIDDKQTQTLPT
                     DEASQARLVFACQSYYQQDLYSEKTHWVEHSFNDWQQFMAVLSQYQQAVRQIFNEIIG
                     EEETQANCNPVNEKLAEWKDILHYNIRLEDLSAVLKGYPKVAENDYTEIFRHFSTTFQ
                     DWVKRPIGVRGREVLRNLMPRIADSIFKGEDHLLLLPRVLNIVDKITTRTTYLELMLE
                     KEQILPQLLALCSKSVMIAEQIARYPMLLDELMSHRGLTDVQAFEKYQSALQDYLIRI
                     PEEDEEALIDGLRQFKQTQILRIAAADILGVLLVMKISDHLTYLAEAIINAVVNMAWK
                     QVSQRFGVPEHLEADEKGFAVIGYGKLGGIELGYNSDLDLVFLHNAPEDSQTVGGKKE
                     ISSHQFYLKLAQKINSIFNLNTSAGVLYEVDMRLRPSGEAGLLVSTFNAYEHYQKNEA
                     WTWESQALVRTRCVFGAENLKQAFEKIRQSTLAQPRASGQLRQEICEMRQKMYQHLSS
                     HSAEQFHIKQDQGGITDIEFIAQYLVLAHSHQHPKMAVWSDNVRIFDSAVECGILSSE
                     QSEQLQHCYTALRNKIHHLNLLRKDSVVDASEFTTERAFVREMWQRLLA"
     gene            complement(6274..6555)
                     /locus_tag="PXE50_002159"
     CDS             complement(6274..6555)
                     /locus_tag="PXE50_002159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006717394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HDL5623027.1"
                     /translation="MYYVIFAQDNPNMLEKRLEVRPAHLARLEKLQAEGRLLIAGPNP
                     TEDGSSVTGSTVIAEFNSLEEAQQWASQDPYVEAGVYSDVIIKPFKRVF"
     gene            complement(6557..7021)
                     /gene="yciA"
                     /locus_tag="PXE50_002160"
     CDS             complement(6557..7021)
                     /gene="yciA"
                     /locus_tag="PXE50_002160"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HDL5623028.1"
                     /translation="MKDKPYGKAPEGKLILRTLAMPSDTNANGDIFGGWIMSQMDLGG
                     AILAKELAKGRVVTVTVDKMIFHRPISVGDVVCCYGKLMHIGRSSMQVKVEVFIKQVY
                     EGNRERYLVTEALFTYVAIDKEGKPRAVPRENNPELDEALSLIDLTPEKQGE"
     gene            complement(7011..7568)
                     /locus_tag="PXE50_002161"
     CDS             complement(7011..7568)
                     /locus_tag="PXE50_002161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HDL5623029.1"
                     /translation="MKQLLEFIPLILFFVVYKMSGIQMASIALVIATIVQMIALKMLY
                     GKIEKQQIIMGGSVVFFGLLSAYFNEVKYLQWKVTIVYALFALVLLVSQFVFKTPLIK
                     KLLGKEIQLPEAVWNKINFGWAVFFLICMLLNIYISQYLSEEIWVDFKSFGIIGLTLV
                     ATVITGFVLYPYLKDAEKQEQKNER"
     gene            complement(7577..>8324)
                     /locus_tag="PXE50_002162"
     CDS             complement(7577..>8324)
                     /locus_tag="PXE50_002162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5623030.1"
                     /translation="SIKFVDLLQQSWNFMRNQQAFSLFAIVTIVVVQLVFILVSPNSP
                     ELMAESQPQQLQIDASKMVSILLPTILLGVVNLLINVLMIFNIQSINDGNYRQFFQNA
                     GNALKHFLPVLLLQFVMVLPLSLGASFAMASPETVIIALPVLVVGFYFFIKLSLVIYA
                     YLLEKPQKSLSESIKFTLQLSRGKMLPLILFCVISYLLPGMLSRLFTVFGNDFIGIFI
                     TIVLSAVINVFMAIFSFRFYQVYRQMPAVR"
BASE COUNT         2442 a         1819 c         1792 g         2271 t
ORIGIN      
        1 tggggagatg gagttgtgat gattaccatc aacgaaaaca ccattgaaca atccgccatt
       61 gcaactttgc aaagcttggg ctgggactac acctacggca aaaaaatttt ggcaggttta
      121 gaacacgaat ggcgggagcg aaccgctgag gtgattttaa agccgctttt ggcgcaagcg
      181 attgcaaaat tcaacccgaa tttgcccgct tgtgaggtgg aaaatgtggt ggcacaggtg
      241 tgccgtgccg acagtggcga tttggcggag cgtaatcgtc aggcttatga ttggctaaga
      301 aatggggtca aaatcactta tcagttgtac ggtgagcagg tgtctgatgt ggtgcagctg
      361 attgattttc agcgtccaga aaataacgat tttcgcattg tcaatcagct ggatattagc
      421 ggcaaaaaag gcaaacgcat tccggatttg attggctttg ttaatggctt gccgctggtg
      481 gtgtttgagc tgaaaaatcc gctcaaagaa aatgccgaca ttggcaaggc gtttgcccaa
      541 ctgcaaacct ataaagatga aatttctgat ttgtttgtgt ttaatcaggc actcgtgatt
      601 tcagacggca ttgtcgcccg catcggttcg ctgaccgctg atttcgaccg ttttacccct
      661 tggcgtgtgg ttgatgaaaa aaatcagagc aaacgcattg tgtttgaaga tgaactcacc
      721 gccctgctgc aaggcgtgat gacacccaaa aatctcttgg attatgtgca gaattttgtg
      781 gtgtttgaac gggacggcaa aaaccgctta attaagaaaa tcggagcata tcatcagttt
      841 tatggcgtga atgaagcggt ggattgcacc ttgcttgccg ccacaggcaa ccgcaaaatc
      901 ggcgtgtttt ggcatacgca aggttcgggc aaatcgcttt cgatgctgtt ttatgcaggt
      961 aaagtattaa gccaaagcag cctgaaaaat ccaactttgg tgttggtaac cgaccgcaac
     1021 gatttggacg gtcagcttta cgccactttt tgcggtggcg aggcactgct caaacaaacg
     1081 ccaatccaag ccgatgggcg agacgaactc cgctctgccc ttgccagtcg ttcggcaggc
     1141 ggtgtgattt ttaccaccat tcaaaaattc ggcttaatgg agggtgagct tgcccaccct
     1201 gtattaaacg agcgggaaaa catcattgtg attaccgatg aagcacaccg ctcacaatat
     1261 ggttttagcc aaaaaatcaa ccacaaaggc gagtatcgtg agggttatgc caagcattta
     1321 cgcagtgcat tgccgaatgc ctcttttatt ggctttactg gcacaccgat tgaacttgat
     1381 gacaaagaca cccaagaagt cttcggtaaa tatgtctcga tttatgattt tgaagatgcg
     1441 gtggaagatg gggcaaccgt gccgattatt tatgagccac gccaaatcag cttaggcgaa
     1501 agtggcgagt tttccaaagt gatggaagag gcacaacaac tgattgatga cgatgaaaac
     1561 agctataact tccgcctgcg tgaaaaactg cacagcgtgg atagccgttt gcaaaaaatg
     1621 gcggaagata ttattgccca ttacgatgag cgtaccaaac agcaagacgg caaggcgatg
     1681 gttgtggtga tgagccgtgc catttgcgtg aaattgtacg aaaaaatcac cgcacttcgt
     1741 ccagaatggc actcaaacga tgtgcttcaa ggcagcatta aaattgtgat gacaagtaat
     1801 gccagcgacc ctgccgagtg gcaaaaacac aatcaggata agaaaacctt agaaaaacgc
     1861 tttaaagacc cagacgatcc gctcaacatc gtgattgtgc gggatatgtg gctgacaggc
     1921 tttgatgcgc cctgctgtaa cacaatgtac attgataaac caatgagcgg acacaacctg
     1981 atgcaggcaa tcgctcgggt aaatcgggta tttcgcaaca aaagccgtga aaatggcggc
     2041 ttgattgtgg attatgtggg cttgaccgat gagctggaaa aagcgatgaa gcagtacacc
     2101 aacgcaggcg gtaaagaaaa gccggtgcgg gacatttcag cggtgctgga aaaaatggtg
     2161 gaacatatca cggtcattcg tgggcaattt gccacaccga ttgacggaca agcggttgat
     2221 attgccaaaa tgttgcaaat cagcgaaccg cctaaactgc tcaatgcgat tttgacatca
     2281 gccaaccata ttcttgccct agaccgcatt cagccacctg ataacactgc caaagacaaa
     2341 accccacgca aaaacgcctt tttgcaatcg gtacgcttgg cgaaaaaagg ttatgctttg
     2401 tgtggggcat taaaagcagt tgaaccctat aaacaggaac tggcgtttta tgatgcagtg
     2461 cgtgccacca ttatcaaaaa cagcaccgct cctcgcaatt cttcgagcga aaatgaccgc
     2521 ttgttgcagc ttaccgcctt gatgaatcgt gcggtacagt cggatggtgt ggtggattta
     2581 tttgatttgc tgaaaaaaga ccgcccaaac atcaacctgc tttctgatga gtttttggaa
     2641 acagtaaaaa acagcccaac caaagatttg tggctatcag caatggagcg ttatcttgcc
     2701 tcacaactgc gagagcaaag cggtgccaat cttgccacaa aaaaagcatt tgaacagaaa
     2761 ctcaaagagg cgatgaacca ataccacaac cacaatttaa gcgtattgga aattttagaa
     2821 gagctgatcg ccctcgccaa agagtttgaa gcccgccaaa aacgagggga agcgttggga
     2881 ctaagccctg cggaaatggc gttttatgat gctttggcac gtaatgaaag tgcggtgcgg
     2941 gaaatgggcg atgaggtatt gatgaaactt gccaaagaca ttaccgataa attacgcaaa
     3001 tcggtcaccg tagattggca atataaagac tcggttcgtg ccaaaatgcg aaccttaatc
     3061 cgcattgctc tgcgtaccta taaatacccg cccgatttac aggcggaagc gattgagttt
     3121 gtgttgcaac aagcggaaga gatcgccgga gagttcgcta tcaccgaaac ggcgtaatct
     3181 atattagggc gtgcaatgta cgccctaaat ttatgctaat aacctctgcc acatttcccg
     3241 cacaaatgct cgctcggtgg taaattcact tgcgtccacc acgctgtctt tgcgtaataa
     3301 gtttaggtgg tggattttgt tacgcagtgc ggtgtagcaa tgttgtagct gttcgctttg
     3361 ttcggaactt aaaataccgc attctactgc gctgtcgaaa attcggacat tatccgacca
     3421 tactgccatt ttcgggtgtt ggtggctgtg ggctaatacc aaatattggg cgataaattc
     3481 aatatcggta atacctcctt gatcttgttt aatatgaaat tgctcggctg aatgcgagct
     3541 taaatgttgg tacattttct gtcgcatttc gcaaatttct tggcgtaatt gaccgcttgc
     3601 acgaggctga gcaagcgtgc tttggcggat tttttcaaag gcttgtttga ggttttccgc
     3661 cccaaataca catcttgtcc gcacgagggc ttggctttcc cacgtccacg cttcattttt
     3721 ttgataatgc tcgtaggcat tgaaagtgct gactaaaagc ccagcctcgc ctgatgggcg
     3781 aagtcgcata tccacttcat atagtacgcc ggcactggta ttaaggttaa aaatcgagtt
     3841 aattttttga gccaatttta agtaaaattg atggcttgaa atctcttttt taccgccaac
     3901 agtttggcta tcctctgggg cattatgcaa gaaaaccaag tcgagatctg aattatagcc
     3961 cagttcaatc ccgcctagct tgccgtagcc aataactgca aacccttttt catcagcctc
     4021 taaatgttcc ggcacaccaa agcgttggct gacttgcttc cacgccatat ttaccaccgc
     4081 attaataatc gcttctgcta agtaagtaag atgatcgctg atcttcatta ccagcagcac
     4141 gcctaaaata tcagcagcgg cgatgcgtaa aatttgggtt tgtttgaact gacgtaagcc
     4201 atcaatcagt gcttcttcat cttcttcagg aatgcggatt aaataatcct gcaaggcaga
     4261 ttgatatttt tcaaaagcct gcacgtcggt taagcctcta tggctcatca gctcatcaag
     4321 tagcattgga tatcgagcta tctgttccgc aatcataacc gacttactac acaatgctaa
     4381 aagttgaggc agaatctgct ctttttcgag cattaattcc aaataggtag ttcgggtggt
     4441 gattttatcg acaatattca acacgcgagg caataacaat aaatgatctt cacctttaaa
     4501 aatgctgtcg gcaattctag gcattaaatt gcgtagcacc tctcgccctc ttaccccaat
     4561 cgggcgtttt acccaatctt gaaaggtagt agaaaagtga cggaaaatct ccgtataatc
     4621 attttctgca acctttggat aaccttttag cactgcggat aaatcttcaa ggcgaatgtt
     4681 atagtgcaaa atgtctttcc attcggctaa tttttcatta accggattgc agttggcttg
     4741 tgtttcctct tcaccgataa tttcattaaa aatctggcgt actgcttgtt gatattggct
     4801 caatactgcc ataaattgtt gccaatcgtt aaaggaatgc tccacccaat gcgttttttc
     4861 gctatataga tcttgctgat aatagctttg gcaagcaaat acaaggcggg cttgcgaggc
     4921 ttcatcagtg ggtagggttt gagtttgttt atcgtcaatc gcttgtaata cattttcaat
     4981 ttgacggtaa aaaatatagg cattgtggag cgtttccacc tgcgtttggg ttaataaatt
     5041 taattctgcc aagcgtggta gcacttttaa caggctacgt tcttgtaaaa ttttatctcg
     5101 cccgccacgg atcatttgga aagtttgggc gataaactcc acttcccgaa tcccaccggc
     5161 accaaattta atattatcgg ttaaattacg gcgaaccact tcacggctga ttttttcttt
     5221 catttcacgc aacgattgga ttgcactgaa atccagataa cggcggtaaa caaaagggcg
     5281 gagcatttgc tttaaatagc gatgatttaa attttggcta tcctcgccta aaatttttgc
     5341 tttaatcatc gcataacgtt cccaatcacg cccttgctct tggtaataat cttccattgc
     5401 agtaaaactc agcaccaagg ctccgctatc accaaagggg cgaagtcgca tatcggtacg
     5461 atacacgaaa ccatcagcgg tgatctcatc taatacttta attaaccgct gccccattcg
     5521 ggtaaaaaat ttgctgtttt caatcgattt gcgtccacct tcggtttcac caatatcggg
     5581 gtaggtaaaa atcaggtcaa tatcggaaga aaaattaagc tctcgtccgc ccaatttgcc
     5641 catacctaaa atcagcagtt cttgtgtttc gccaagagtg ttctttggcg tgccatattc
     5701 ggcacagcaa cgctgaaaca accaatctcg agcggctaga atcaggctct cggctaaatc
     5761 cgacaaatgc tgaaatacca attctaccgt cgctaattta tttgactgaa taaagctcag
     5821 acgagccaat tcacggtggc gaaattgccg caaaaccctc cccaacattt cttcattttc
     5881 cactcttgct aatatttttg ctaaacgctc agtataattg cagcaatcat caggcgtagg
     5941 aaacttggca agccattctg ccagtaaatc cggctgtttt tgcaaggttt gatgcacgaa
     6001 attggaaagc gaaatcgccg tcacaagcgg ttgaatttgc tcagaatttt gcaaattggg
     6061 cggtaaattg agttgggata agggaattag ggtggtaagc ataaatttag gctcaaaatt
     6121 gaaaatagat agaattttac gctcgatcaa ttcccctctt tagcaaagag ggcttagggg
     6181 agatttggca gaggtaattt tactctcata cgaaacatta atatcgtaat caaatctccc
     6241 ccagcccctc ttttctaaag aggggagaaa aaattaaaac actcttttaa acggtttaat
     6301 aatcacatcg ctatacacac cggcttccac ataaggatct tggcttgccc attgttgagc
     6361 ttcttcaagt gagttgaact ctgcaattac agttgaaccg gttacgcttg agccgtcttc
     6421 agtcgggtta ggccctgcga ttaataatcg accttctgcc tgtaattttt ccaaacgagc
     6481 caaatgagcc gggcgaactt ctaaacgttt ttccaacata ttgggattat cttgggcaaa
     6541 gataacataa tacatactat tctccttgtt tttcaggggt taaatcaatt agcgataatg
     6601 cttcgtctaa ttcggggtta ttttctctcg gcacagcacg cggtttgcct tctttatcaa
     6661 tcgctacata ggtaaataag gcttcggtta cgagataacg ttcgcgattg ccctcataaa
     6721 cttgtttgat aaagacctcg actttcactt gcatcgaaga acgccctatg tgcattaact
     6781 tgccgtagca gcagaccaca tcaccgactg aaatcgggcg gtggaaaatc attttatcta
     6841 ccgttaccgt aacgactcta ccttttgcca actctttggc taaaattgca ccgcctaaat
     6901 ccatctgcga cataatccaa ccgccgaaaa tatcgccatt ggcgttagta tctgacggca
     6961 ttgccaaagt tcttaaaatc agtttccctt ccggggcttt tccatagggt ttatctttca
     7021 tttttttgtt cctgcttttc agcatctttt aagtaagggt aaaggacgaa accggtaata
     7081 accgttgcga ctaaggttaa gccaataatg ccaaaggatt tgaaatcaac ccaaatctct
     7141 tccgataaat attgactgat ataaatattc agcagcatac aaatcagaaa gaatactgcc
     7201 caaccgaagt ttattttatt ccacactgct tcaggcaact gaatttcttt gcctaataat
     7261 tttttgatta atggtgtttt gaacacaaat tggctcacta atagcaccaa tgcaaacaga
     7321 gcgtaaacaa tggttacttt ccattgtaaa tatttaactt cattaaaata ggcactcagt
     7381 aagccgaaaa agaccaccga gccacccata ataatttgct gtttttcaat tttgccgtag
     7441 agcattttta aggcgatcat ttgcacgatt gtagcgataa ccaatgcgat agacgccatc
     7501 tgaataccgc tcattttata cacgacaaaa aacagaatca gcggaataaa ttcaagtaac
     7561 tgtttcattg atactcctaa cgcactgccg gcatttggcg gtaaacttgg taaaagcgga
     7621 agctgaaaat cgccataaag acgttaatta ccgcacttaa aacaatggta atgaatatgc
     7681 caataaagtc attaccaaac actgtgaaca aacgagataa catccccggt aataaataag
     7741 aaatcacaca aaataaaatc agcggtagca tttttccacg tgataattga agcgtaaatt
     7801 taatactttc cgatagactt ttctgcggtt tctccaataa ataagcataa atcactaacg
     7861 ataatttgat aaaaaaataa aaaccgacta ccaacaccgg caatgcaata atcactgttt
     7921 caggcgatgc cattgcaaaa gatgcaccga gagaaagcgg taacaccatc acaaattgta
     7981 acaacagcac aggtaggaag tgctttaatg cgtttcctgc attttggaaa aattgacgat
     8041 aattgccatc gttaatcgat tggatattga aaatcattaa gacattgatc aaaagattga
     8101 caacacctaa taaaatagtt ggcaatagta tagacaccat tttagaggca tcaatttgaa
     8161 gttgttgcgg ttgcgactcc gccattagct caggcgaatt tggcgacact aaaataaaaa
     8221 ccaactgcac aaccacaatg gtgacaatgg caaacagtga aaatgcttgt tgattacgca
     8281 taaagttcca actttgctgc aataaatcga caaatttaat tgac
//
LOCUS       DANLZQ010000108         8223 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.108, whole genome shotgun sequence.
ACCESSION   DANLZQ010000108 DANLZQ010000000
VERSION     DANLZQ010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8223)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8223)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8223
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.108"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            470..655
                     /locus_tag="PXE50_002163"
     CDS             470..655
                     /locus_tag="PXE50_002163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623031.1"
                     /translation="MNKMKQLAPFALLILLLGIVGRMDYDDHIQMQRYKCERNQGFWQ
                     MESNGNQYCGGKYGTKN"
     gene            639..836
                     /locus_tag="PXE50_002164"
     CDS             639..836
                     /locus_tag="PXE50_002164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623032.1"
                     /translation="MARKIDAGVEIVEVDKRFIAKFFYDGKLQHTTYPQYNRQNAIML
                     INRKIERFNIGRDKPIKLYKE"
     gene            839..1813
                     /gene="ssb"
                     /locus_tag="PXE50_002165"
     CDS             839..1813
                     /gene="ssb"
                     /locus_tag="PXE50_002165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDL5623033.1"
                     /translation="MAGINKVIIVGRLGNDPELRTMPNGDSVAKISVATSTEWTDKTS
                     GEKKQATEWHSIIAFRNLADIIGKYLKKGSQVYVEGKLRTRKWQAQDGTDRWTTEIIA
                     DQLQMLGSSNSGNSNNNWATEPAGNPPPTNPYNHVMTDSESRDFDDDIRVRWITKEQA
                     KQFINNISTDWMKTICSFALLTGARRTEILSMTWDKIDFIRKVAIVSNDIAKSEKARS
                     LLLNDDAIELLQKQRGKNPKYVFVGSKGQALQDINRKIFNKATEKCLLVDFHFHDLRH
                     TWASWHVQAGTPLFTLKELGGWETLEMVKKYAHLNADHLLNHANSVKF"
     gene            complement(1900..1976)
                     /locus_tag="PXE50_002166"
     tRNA            complement(1900..1976)
                     /locus_tag="PXE50_002166"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1940..1942),aa:Arg,seq:tct)
     gene            complement(2001..2077)
                     /locus_tag="PXE50_002167"
     tRNA            complement(2001..2077)
                     /locus_tag="PXE50_002167"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2041..2043),aa:Pro,seq:tgg)
     gene            2247..3107
                     /gene="folD"
                     /locus_tag="PXE50_002168"
     CDS             2247..3107
                     /gene="folD"
                     /locus_tag="PXE50_002168"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HDL5623034.1"
                     /translation="MTAQIISGSEVSSQIKKKVSEKIAHYLEQGKRNPGLAVILVGND
                     PASQVYVGSKRKSCAEIGIASKSYDLPEETTEAELLALIEKLNQDDSVDGILVQLPLP
                     KQIDSTKVIEAILPHKDVDGFHPYNVGRLSQRIPTLRPCTPYGVMKLLETTGVDLYGQ
                     HAVIVGASNIVGRPMALELLLGGCTVTVTHRFTKDLEHHVRQADILVVAVGKPEFIPG
                     EWVKDGAIVIDVGINRGADGKLKGDVEYSVASQKAAFITPVPGGVGPMTVAMLMQNTL
                     QTYENHLQAV"
     gene            3221..4672
                     /gene="thiI"
                     /locus_tag="PXE50_002169"
     CDS             3221..4672
                     /gene="thiI"
                     /locus_tag="PXE50_002169"
                     /EC_number="2.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 4-thiouridine(8) synthase ThiI"
                     /protein_id="HDL5623035.1"
                     /translation="MKFIIKLFPEIMIKSDSVRKRFIKILTSNIRNVLLKETENVSVV
                     RHWDFIEVRAKVDEETALVLDLLKRTPGIHHILEVEETPFTDMHDIFEQTYAAVKAEL
                     EGKTFSVRVRRKGKHDFRSLDVERYVGGGLNQRIETAKVKLTNPDVTVRIDIEHDKML
                     LIKARHEGLGGYPIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGGAAHEI
                     GVKQMAYHIWSRYSTSHKVRFIAINFENVVGEILEKVDNGQMGVVLKRMMVRAASRIA
                     ERFDIQAIVTGEALGQVSSQTLTNLRLIDKASDTLVLRPLITHDKEQIIAMAKAIGTD
                     DIAKSMPEFCGVISKNPTVKAIETKILEEEGNFNFEVLEQAVQTASYLDIREIAQQTE
                     KEVVSVETTTELSKNDVVLDIRSPEEVDEKPFRLDGVEVKELPFYKLSSQFSTLDQSK
                     TYLLYCQRGVMSKLQALYLKENGYSNVKVFRVK"
     gene            complement(4717..5424)
                     /locus_tag="PXE50_002170"
     CDS             complement(4717..5424)
                     /locus_tag="PXE50_002170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YwiC-like family protein"
                     /protein_id="HDL5623036.1"
                     /translation="MFKEKPVISNQHGALAMAMLPFLYAVIESGFSTLHIFFGLSWLF
                     LYFFSYPFLSLFSKKPTERNKKWAKIYFGLSILFALPLIYAQPSILQFLPIILPLGLV
                     QVHYAKQKDERNLWNDIAGILTFGIMGMAAYYLVTKQYQFEILLHPTLFFIATTFYIK
                     SMVRERRNPIYMEISIAIHLVLAMLYILCSLQAVFFAYLIATARAIIVPSFGWNVKQV
                     GMLEFPVILLFLASLIW"
     gene            complement(5492..6466)
                     /gene="pfkA"
                     /locus_tag="PXE50_002171"
     CDS             complement(5492..6466)
                     /gene="pfkA"
                     /locus_tag="PXE50_002171"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HDL5623037.1"
                     /translation="MSKKIKKIAVLTSGGDAPGMNAAIRGVVRTALNEGLEVCGIQDG
                     YYGLYHDKVIPLDRRSVSETINRGGTFLGSARFPDFKRPEVRKHCVETLKKYSIDALV
                     VIGGDGSYMGAKLLTEEFGYPCIGIPGTIDNDIVGTDYTIGYQTALETALDAIDRLRD
                     TSSSHQRISIVEIMGRHCGDLTLSAALAGGCEYVIVPEKGLDKDALMRSIEEGFHKGK
                     RHSIIAITELMTDVHALAKEIEARFGNETRATVLGHIQRGGSPCAFDRILASRMGVYA
                     VELLLQGFGGHCVGIQNEQLVHHDIIDAINNMRRPFKEELFEASRKLF"
     gene            complement(6573..7769)
                     /locus_tag="PXE50_002172"
     CDS             complement(6573..7769)
                     /locus_tag="PXE50_002172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HDL5623038.1"
                     /translation="MLNTQFRTHFPFFEKSDGWTYLDSAATTLKPDVLIEATSEFYAS
                     AGSVHRSQYDLPQTEQYELARDLVAKRFNVETREAVIWTSGTTQSINTVAYGLEHQIA
                     AGDEIVISVAEHHANFIPWQQLAQRTRAKLVVLPLNDKYEIELETLKNALSEKTKIVA
                     FNLVSNVTGVRQPAEQIIPLIRQSCSAKIVLDIAQAVCSEQVDVQKLDADFYAFSAHK
                     MYGPNGVGVLTGKLQSLEQIQPLVFGGKMLKNITESELTVAELPYRLEAGTPNIAGII
                     GFGQVLAWLEKWDFVALNHQLYDLAEYTCKRLNSYQNLQIIGQQNTPTISFVVKNQHP
                     ADIAAFLTQSKIAIRQGEHCAKPYLRHLEEVGTVRLSLAHYNNQQDVEHFFNALDFTL
                     EILQES"
BASE COUNT         2564 a         1562 c         1760 g         2337 t
ORIGIN      
        1 attgacttgt aatttaagtt ttcttaaact taattcatca aaacgagcta cggctcaatg
       61 ctctttaaca attcggtgct tgtgcggacg atattaacaa cctcgggcag ttgtaaagta
      121 atgctttata actcagtaag gttggttaga ccctgacata caaatttgaa cgacttgcca
      181 aaaagaggtg gcaaggttta ggcaacacac tcgcaaggtg tggagagctg aaaaggcaac
      241 actggtatca gtcctaagca atcacgctta tctcaagttt gagtaagtac ggatacaagc
      301 agcacccgac ggaatggcga aagccgggcg ggcgacggcg tgggcagaca cgcatttatt
      361 ccaaagctca tttcaccaag tgtgtttcgg aatacccaca actagacgca agtcgctcca
      421 tttgcccacc gtaaaacgtg ggcttttttt aaccctaaag gacaatccta tgaacaaaat
      481 gaaacaactt gccccatttg ccttgctaat tttgctatta ggcattgtcg ggcgaatgga
      541 ttatgacgac cacatacaaa tgcaacgtta caaatgcgaa cgaaatcaag gcttttggca
      601 aatggaaagc aacggcaacc aatactgcgg agggaaatat ggcacgaaaa attgatgccg
      661 gtgttgagat tgttgaggta gataaacgat ttatcgccaa gtttttttat gacggcaaat
      721 tacagcacac aacctatcca caatacaacc gccaaaacgc aattatgttg attaaccgca
      781 aaattgagcg gttcaacatt ggcagagaca aaccaatcaa actttataag gaataacaat
      841 ggcaggaatt aacaaagtga ttattgtcgg tcgcctaggt aacgacccgg aactacgaac
      901 aatgccaaat ggcgattcag tcgccaaaat cagtgtagca acttcaaccg aatggacgga
      961 taaaacctca ggcgagaaaa aacaagccac agagtggcat agcattatcg cctttcggaa
     1021 tttagctgac attatcggca aatacctgaa aaaaggctcg caagtgtatg tggaaggcaa
     1081 gctacgcact cgcaaatggc aagcccaaga cggcacagac cgctggacga ccgaaatcat
     1141 cgccgatcag ctacaaatgc tcggtagctc aaacagcgga aacagcaata ataattgggc
     1201 aaccgaaccg gcaggaaacc caccaccaac caatccatat aaccacgtaa tgacggattc
     1261 agaatcacga gattttgatg atgatatccg ggttcgttgg attaccaaag aacaagccaa
     1321 gcagtttatt aataatatta gtactgattg gatgaaaact atctgctctt ttgctttatt
     1381 aacaggagca aggcgaacag aaatactttc tatgacttgg gataaaatag attttatccg
     1441 taaagtagcg attgtttcga atgatattgc caaatctgaa aaagcgagat cgcttttact
     1501 taatgatgat gcaattgaat tattacaaaa gcagagaggg aaaaatccta aatatgtttt
     1561 tgtaggaagc aaagggcagg cattacaaga tattaaccgc aaaatattta acaaagcgac
     1621 tgaaaaatgt ttattggttg atttccattt ccatgattta aggcatactt gggccagttg
     1681 gcacgttcag gccggcacac cattatttac cttaaaagaa ttgggtggct gggaaacatt
     1741 agagatggta aagaaatatg cccatcttaa tgcagaccat ttactcaacc acgctaactc
     1801 agttaaattc tagtcacaaa ttagtcacaa agtatttttg acataggaaa ttaataactg
     1861 atatttaaat gtaactattt gaaatataag ggtaattaat ggcacgccct aaaggattcg
     1921 aacctttgac ccacgcctta gaagggcgtt gctctatcca gctgagctaa gggcgcagat
     1981 gaagataata taaaaagaag tggtcggcga gataggattt gaacctacga cccactggtc
     2041 ccaaaccagt tgcgctacca agctgcgcta ctcgccgaca taagatgttg ttgattatag
     2101 atttctttgc acaacagtca atcttttttt gtgaatgtcg gcttaaatga ttgaagttta
     2161 tccgttattc aaaattagct tatcaaaaag gctatttttt gagagaatga cgaatgtttt
     2221 gccaagtgat atttcgggag gtagtaatga ctgcacaaat tatttcgggg agtgaggttt
     2281 cttcacaaat taaaaaaaag gtgagtgaga aaatcgctca ttatcttgaa cagggtaaac
     2341 gtaaccctgg tcttgcggtc attttagtgg ggaatgaccc agcctctcaa gtgtatgtgg
     2401 ggagtaaacg caaaagctgt gccgaaattg ggattgcgtc gaaatcttat gatttacccg
     2461 aagaaaccac agaggctgaa ttattagcac tgattgaaaa gttgaatcaa gatgattcgg
     2521 tcgatgggat tttagtccaa ttaccgttac ctaaacagat cgattcgact aaagtgattg
     2581 aagccatctt accacataaa gatgttgatg gattccaccc ttataatgtt gggcgtttat
     2641 ctcagcgtat tcccacttta cgcccttgca cgccatacgg tgtgatgaag ttgcttgaaa
     2701 caactggggt agatttatat ggtcaacacg cagtgattgt aggtgcgtct aatattgttg
     2761 gtcgcccgat ggcgttagaa ttgttgcttg gtggttgtac agtcacagtt actcatcgct
     2821 ttaccaaaga tttagagcat cacgttcgcc aagcagatat tttagttgtg gcagtcggca
     2881 agcctgaatt tattcccggg gagtgggtta aagacggtgc tatcgtgatt gatgtaggga
     2941 ttaaccgtgg agcagacggc aaactaaaag gtgatgtaga gtattcagtt gcctcacaaa
     3001 aagcggcatt tatcacccct gtccccggtg gggtaggccc gatgacggtg gcaatgttaa
     3061 tgcaaaatac cttgcagacg tatgaaaacc atttacaagc ggtctaattt tacggatatt
     3121 ttgcaaatcc tcggcattgg tcgaggattt ctttttctgg gctttttcag cagaaaaggc
     3181 taaaatactt gccattttta ttacacgatc cttattaaat atgaaattta tcatcaaact
     3241 tttccctgaa attatgatta aaagcgactc tgttcggaaa cgctttatca aaattttaac
     3301 ctcaaatatt cgcaacgtat tattaaaaga gactgaaaat gtgtctgtgg ttcgccattg
     3361 ggactttatt gaagttcggg cgaaagtgga cgaagaaacg gcattagtgc tggatttgct
     3421 taaacgcacg ccgggtattc accatatttt agaagtggag gaaacccctt ttacggatat
     3481 gcacgatatt tttgagcaga cttatgccgc agtgaaagct gaactagaag gcaaaacgtt
     3541 tagcgtgcgg gttcgccgta aaggaaagca cgatttccgt tctcttgatg tagagcgtta
     3601 tgtcggtggt gggctgaatc agcggattga aacggcgaaa gtgaaattaa ccaacccaga
     3661 tgttacggtc agaattgata ttgaacatga taaaatgttg ctgattaaag ctcgccacga
     3721 agggttaggc gggtatccaa tcggcacaca agaagatgtg ttgtcattga tttcgggtgg
     3781 ttttgattcg ggtgtatcga gctatatgct gattcgcaga ggttctcgtg tgcattactg
     3841 ttttttcaat ttaggtggtg ccgcacacga aattggcgtg aaacagatgg catatcatat
     3901 ttggagccgt tatagtacct cgcacaaagt ccgttttatc gccattaatt ttgaaaatgt
     3961 agtgggtgag attttagaaa aagttgataa cggacaaatg ggcgtggtat taaaacgtat
     4021 gatggtgcga gcggcaagcc gtattgccga gcgttttgat attcaagcga ttgtgaccgg
     4081 tgaggcgttg gggcaggtct ctagccaaac actgactaat ttacgtttaa ttgataaggc
     4141 atcagatacg ctggtattac gtccgctcat cactcacgat aaagagcaga ttattgcaat
     4201 ggcaaaagcg ataggcactg acgatattgc taaatcaatg ccggagttct gtggagtaat
     4261 ttctaaaaat ccgacggtta aggcaatcga aactaaaatt ttggaagaag aaggcaactt
     4321 taattttgag gtactagaac aagcggttca aacggcgagt tatttagata ttcgtgagat
     4381 cgctcagcaa accgaaaaag aggttgtttc ggttgaaacc acaacagaat tgagtaaaaa
     4441 cgatgttgtg ctagatattc gcagcccgga agaggttgat gaaaaaccat tccgtttaga
     4501 cggggttgaa gtaaaagaac tcccgtttta taaactttcc agccagttta gtacgcttga
     4561 ccaaagcaaa acctacttgc tctattgcca acgtggggta atgagtaaac tgcaggctct
     4621 ttatttgaaa gagaatggct acagcaatgt aaaagtgttt cgagtgaaat aatgcctctt
     4681 tgattgcacc ttaatgattg attaaggtgc aattttttac caaataaggc ttgctaaaaa
     4741 gagtaagatc acaggaaatt caagcattcc aacttgttta acattccagc caaagcttgg
     4801 cacaataatg gctcgggcag ttgcaattaa ataagcaaaa aagaccgctt gtagagagca
     4861 gagtatgtaa agcattgcta aaaccaaatg tattgcaata ctgatttcca tataaattgg
     4921 gtttcttcgc tctcgcacca tactctttat atagaaagtc gtagcaataa aaaatagggt
     4981 agggtggagc agaatctcaa actgatattg tttcgttacc agataataag ctgccattcc
     5041 cattatgcca aaggttagaa tgccggcaat atcattccat aaattgcgtt catctttttg
     5101 tttggcgtag tgaacttgca ctaacccaag cggtagaatt atcggtaaaa attgcaaaat
     5161 cgaaggctga gcgtagatca aaggtaatgc aaatagaatg cttaagccaa agtagatttt
     5221 cgcccatttt ttattgcgtt cagttggctt tttactgaaa agtgagagaa aagggtagga
     5281 aaagaagtag agaaacagcc acgacagccc aaagaaaata tgcaaagtgc taaaaccact
     5341 ttcaataacg gcgtagagaa acggcaacat tgccattgct aatgcaccgt gttggttgga
     5401 tataacgggt ttttctttga acattcaatt tccctcttaa tgtggcaaat aaaaaggcga
     5461 ctaaacagcc gcctttaaat tgtaagaaaa gttagaataa ttttctagag gcttcaaata
     5521 attcttcttt gaacggacga cgcatattat tgatcgcatc aataatatcg tggtgaacca
     5581 actgctcgtt ttgaataccg acacagtgac cgccaaagcc ttgcagtaat aattccaccg
     5641 catagacgcc catacgggag gccaaaatac ggtcgaaggc acaaggcgaa ccaccacgtt
     5701 gaatatgacc taatacggtt gcacgggttt cattgccgaa acgtgcttca atttctttcg
     5761 ctaatgcgtg aacatcggtc atcaattctg taattgcaat aattgaatgg cgtttacctt
     5821 tgtggaaacc ttcttcaatg cttcgcatta atgcatcttt atctaagcct ttttccggta
     5881 cgatcacata ttcgcaacca ccggcgaggg cagcacttag ggttaaatca ccacagtggc
     5941 gacccataat ttccacaatc gaaatacgtt ggtgtgaact tgaagtatca cgcaggcggt
     6001 caatcgcatc taatgcggtt tcaagggcag tttgatagcc gatggtgtaa tccgttccca
     6061 caatatcgtt atcaatcgta cccggaatac cgatacaagg gtaaccaaat tcttcggtta
     6121 ataatttagc ccccatataa gaaccgtcgc caccaataac cactaatgca tcaatgctgt
     6181 atttttttaa ggtttcgaca caatgtttgc gaacttctgg tcttttaaaa tcagggaagc
     6241 gggcagaacc taagaatgta ccgcctcggt tgatggtttc agacacggaa cggcggtcaa
     6301 gtgggatcac tttatcgtgg taaagcccat agtagccgtc ttgaatacca caaacctcta
     6361 aaccttcatt aagtgcggta cgaaccacac cacggattgc cgcgttcatt cctggtgcat
     6421 caccaccact ggttaatact gcaatttttt tgattttttt actcatttaa aaacaccttg
     6481 ttgataaatt aaagttaaat tggaaactgg tgcaaggtta caatattcag ccttttcgtt
     6541 ctactaaaaa atacgtattt ttttgattta gcttagcttt cttgcaaaat ttcaagggta
     6601 aaatctagag cgttgaaaaa atgctcaaca tcttgttgat tattgtaatg ggcaagtgaa
     6661 agtcgaactg ttccgacctc ttctaaatgg cgtaaataag gcttggcaca atgctcccct
     6721 tggcggatcg caattttact ttgggttaag aaagcggcaa tatcggcagg gtgctgattt
     6781 ttcaccacaa agctaatagt cggtgtattt tgttgcccga taatttgcaa attttgataa
     6841 gaatttaacc gcttgcaggt gtattcagcc aagtcataaa gctgatgatt aagagcgaca
     6901 aaatcccatt tttcgagcca agctagcact tgcccaaagc cgataatgcc ggcgatattc
     6961 ggcgtgccag cttccaagcg ataaggtaac tctgccacag ttaattcact ttccgtaatg
     7021 tttttcagca ttttgccgcc aaatacaagc ggttgaattt gctccaaact ttgcaatttg
     7081 ccggtaagca cgcccacacc gtttggacca tacattttat gggcggaaaa agcgtagaaa
     7141 tctgcatcta atttctgaac gtccacttgc tctgagcaaa ctgcttgagc aatatctaac
     7201 acaattttag cagagcaaga ttggcggata agcgggatta tttgttccgc tggctggcga
     7261 actcctgtta cgttagaaac taaattaaag gcaacaattt tggttttttc cgataacgca
     7321 tttttaaggg tttcaagctc aatttcatac ttatcattaa gtggcaacac cacgagtttc
     7381 gcccttgtac gctgtgccaa ctgctgccaa ggaataaaat tagcgtgatg ttccgccact
     7441 gaaattacaa tttcatcgcc tgctgcaatt tgatgctcca agccataagc cacggtgtta
     7501 atactttggg ttgtaccgct tgtccaaatc accgcttcac gagtttccac attgaaacgt
     7561 tttgcgacta aatctcgagc taattcatat tgttcggttt gtggcaaatc gtactgactg
     7621 cgatgcaccg accccgcaga agcgtaaaac tcacttgttg cttcaatgag tacatcaggt
     7681 ttcagcgttg tagcggcaga atctaaatac gtccatccgt cagatttttc aaaaaaaggg
     7741 aaatgggtgc gaaattgggt gttaagcata agttaattcc taagagttgt ggaaaattga
     7801 gttaccaaga aaatacctat tataaaggaa tgttttgagg taagaagcat ttcaagaaat
     7861 aaatagattt attttgttat ctttttgtta aattcgtgtt gactaataaa attattttta
     7921 taaaatccac ataaaaaata tggtctattt agggggggta aaaaataaat attactaatg
     7981 tatgagaaga agataatcta tattttttaa aatgccctga aatatattct attcgtttta
     8041 acctaagaga ggttatatga aattattttt taaaaatgcg aataaaatca taaatatgtt
     8101 tttgttttat atttttatat attgtatatc tttaataata tcatcatttt ttaatgtgca
     8161 tgttgcttat ttttattttg gaatattatt ttatttttta attattttaa gaaaatagtc
     8221 act
//
LOCUS       DANLZQ010000109         8132 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.109, whole genome shotgun sequence.
ACCESSION   DANLZQ010000109 DANLZQ010000000
VERSION     DANLZQ010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8132)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8132)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8132
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.109"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(149..1507)
                     /locus_tag="PXE50_002173"
     CDS             complement(149..1507)
                     /locus_tag="PXE50_002173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDL5623039.1"
                     /translation="MANQQQERQSWSNRLAYIMTVAGATVGFGATWRFPYLVGEHGGG
                     AYVFLFCIAMIVIGIPMILVENVIGRRMRVNAIDAFAGFANGKKIASGWKILGYMGLL
                     GAFGILAYYMVLGGWVLNYIGSLLTGTLDLSQPVTVGTTQQFFQQSIFNSPMTIIAYT
                     ALFVLVNYFILVKGIVDGIERSVKYLMPILFIFLIVMVVRNITLPGAAEGIAFYLMPD
                     FSKITPKLFVFVLGQVFFALSLGFGVLITLSSYLDKSENLVKTATITGVMNTLIAVLA
                     GFMIFPSLFSFGVAPNSGPTLVFQSLPIVFSNMWGGTVFAVIFFSLLVVAALTTSLTI
                     YEVIITALQEKAKISRQKAIFITLATIFLLGNIPSALSDNILQDVQVMGKSIFDAFDY
                     ISGNILFILTALGSAIFVGFVLKEEAKEELGAGKMFTTIWFNYVRFVIPVIILVIFFN
                     SL"
     gene            complement(1577..2404)
                     /locus_tag="PXE50_002174"
     CDS             complement(1577..2404)
                     /locus_tag="PXE50_002174"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Dam family site-specific
                     DNA-(adenine-N6)-methyltransferase"
                     /protein_id="HDL5623040.1"
                     /translation="MNHPKHRAFLKWAGGKYRLIPDIQTHLPKKACLVEPFVGAGSVF
                     LNTDFERYILADINPDLINLFNVVKADVEEYIAQTKQLFLHPQANTEAFYKARRAEFN
                     RSKDIFRRSVIFLYLNRFGYNGLCRYNQKKGYNVPFGRYKTHYFPEKELRFFAEKAQK
                     ATFVCADFEQVFELAKNQLTDYVIYCDPPYAPLAQETNFTQYAGGGFSLEQQGRLATL
                     ALEMKGLGVPVLISNHDTDFTRRIYQSADITQIQVQRSIGQKVGSRVKVGELFALFI"
     gene            complement(2418..3506)
                     /gene="aroB"
                     /locus_tag="PXE50_002175"
     CDS             complement(2418..3506)
                     /gene="aroB"
                     /locus_tag="PXE50_002175"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005611318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HDL5623041.1"
                     /translation="MLQVNVELKERRYPIIIGAGLLNQPASYSPLKSGDKVMIVSNPT
                     VATHYLSVVTNALKELGCHVDSVLIPDGEEYKTLESLNLIFTALLEKNHNRDTTLIAL
                     GGGVIGDVAGYAAASYQRGIRFIQIPTTLLAQVDSSVGGKTAVNHPLGKNMIGAFYQP
                     VSVIVDTNTLHTLSKREVSAGLAEVIKYGAIFDVTFFEWLEKHIDDLVSLKQDELEYC
                     IQRCCQLKADVVARDETEKGDRALLNLGHTFGHAIEARMGYGVWLHGEAVSVGMLEAA
                     ELSRILGDLSPQEVARLEKLLARANLPTISPDGMEPAEYLPYMWRDKKVLAGQLRLIL
                     LKSLGEAYVSSQATESQVLASIERFTQR"
     gene            complement(3530..4051)
                     /gene="aroK"
                     /locus_tag="PXE50_002176"
     CDS             complement(3530..4051)
                     /gene="aroK"
                     /locus_tag="PXE50_002176"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005710312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase AroK"
                     /protein_id="HDL5623042.1"
                     /translation="MAEKRNIFLIGPMGAGKSTIGRQLAQTLGMEFMDSDSVIEERAG
                     ADIDWIFDVEGEEGFRKREERILNELTQNYGIVLSTGGGSILSKDNRNVLSARGIVIY
                     LETTVDKQFERTQRDKKRPLLQTEDPRKTLEELAKIRNPLYEEIADITIHTDEQSAKV
                     VANQIIDMIDNLQ"
     gene            complement(4288..6852)
                     /locus_tag="PXE50_002177"
     CDS             complement(4288..6852)
                     /locus_tag="PXE50_002177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HDL5623043.1"
                     /translation="MRIAKIIFSALLSLLVLGGVIGGLLYMHFKSDLPDVATLKNVEL
                     QQPMQIFTLDGKLIGEVGEERRIPVKLDDIPPMLVKAILATEDARFYEHKGIDPKGIM
                     RAIWRTSQGDTQGASTITQQLAKNFFLTPERSLERKAKEAILALEIEQVLSKNEILEL
                     YLNKIYLGYRSHGVAAAAKTYFNKSLKDLTLSEIAIIAGLPKAPSTMNPLYSVKRAED
                     RRNVVLGRMLETGDITKEEYEKAKAEPVVANYYGATLEFRADYVTEMVRQEIVKRYGE
                     NIAYNKGLKVYATVLSADQKAAQDALRENLIDYDRRHGWRGAEKLWTGSSAWDDEKII
                     DHLSKLPKSEPFTPAVVMQADKSKYTILLANGDISVLKRTNASFAPKGLKAGEQIWVR
                     QNKNREWALGQIPEVNSALVSINSENGAIESIVGGFSFEQSRFNRATQSLVQVGSAIK
                     PFIYTAAMNKGLSLSTTISDSPIVIKKKGQKEWRPKNADGVYGGPLRTRVALGKSKNM
                     VAIRILQMAGIDYVADYLQRFGFNRNQYVATESLALGAASFTPLEMARAYAVFNNGGY
                     LIEPYIIDRIIDAQGYELYQANPVVACNSCDSPVVYPEPKYFESVKIHDEAQVGVQTI
                     ANSSNNDDDDVVEDVGDSEPELQANNSEKNAPSLMAESSHHIKGLRYAPHVISDELAF
                     LMRSALATAITGEPEYGWRGTSYKMLNTIKRADVGGKTGTTNNAKATWYAGFGANIST
                     VVYVGFDDNKRVLGRGASGSSTALPAWTNYMKVALSDKPVEKSTLPKNIIEVNIDPNS
                     GFLGNGRKEYFIKGTEPTKRYIVERAYTEKAPQKTESAPLRLGLPPPGVLKSGELF"
     gene            6976..7674
                     /locus_tag="PXE50_002178"
     CDS             6976..7674
                     /locus_tag="PXE50_002178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein ComA"
                     /protein_id="HDL5623044.1"
                     /translation="MKLLKAHSKTPSNRIILGLSEDEQRYCLVKNKAEKFTVFWQAKP
                     ASIEELIGNLTPQEQAMMTLVRPIPYQYIWRKTVFMANTLNEAQLHRKVIHILKNEQP
                     LALDLLNIDYQRFPSSNDNLDKVVIYAVRKSYTENLSQFNSILDCELHCYARAIIHLT
                     QSQNNQPAPCFSFKQKYFQFTETELLILQTEPEDCIHLSDLKIDHLEIECEQEKQLYC
                     LALGASLWNGKVLI"
     gene            7650..>8132
                     /locus_tag="PXE50_002179"
     CDS             7650..>8132
                     /locus_tag="PXE50_002179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623045.1"
                     /translation="MEWQGIDLSANRKNNWFAGSDKGIKNVIYTLLLSALISLALIFL
                     YLQKNQEIQPLAQQLELVKTDILNIENKIISLNSNHTNTLPFAEPKKIAQLLAIIDNL
                     PLKNGGIETIQIYLETDLYLKIIGNLDNQSDFQSLESYLYQQDLFETKTEQINVNHKN
                     E"
BASE COUNT         2599 a         1800 c         1337 g         2396 t
ORIGIN      
        1 cattttagaa tgctattatc ctgactgttc ttattccccc ccaatatgct tggttaatta
       61 agcaagaatt gcaaattccc cacaaaattt aaccgcttgt cactaaaaat aaagctgttt
      121 gaaaatccat tcaaacagct tatagaattt agagtgaatt aaagaaaatc accaagataa
      181 tcaccggaat cacaaagcga acatagttaa accaaatagt ggtaaacatt ttacccgcac
      241 ctaattcctc cttcgcctct tcttttagaa caaagccaac gaaaatcgcg ctacctaagg
      301 cggttaaaat aaacagaata ttgccactaa tataatcgaa ggcatcaaaa atgctcttgc
      361 ccataacctg cacatcttgc aatatattgt cacttaatgc tgatggaata ttacccaaca
      421 gaaaaatagt agccaaagta ataaaaatag ctttttgacg gctaatcttt gccttctctt
      481 gcaatgcagt gataataact tcataaatag ttaacgaggt tgttaatgcc gccaccacta
      541 atagactaaa aaagataacc gcaaaaactg ttccccccca catatttgag aacacaatcg
      601 gcaaactttg gaatactaaa gtcggacctg aatttggagc aacgccaaag ctaaataatg
      661 acggaaaaat cataaaaccg gcaagtaccg caattaaggt gttcatcacc ccagtaattg
      721 ttgctgtttt tactaaattc tcgctcttat caaggtagct tgaaagggtt atcaacacac
      781 caaaaccaag gcttaatgca aaaaatactt gacccagcac aaacacaaac aattttggtg
      841 tgatttttga aaaatcgggc atcagataaa aggcaatgcc ttcagcagcc cccggtaagg
      901 taatatttcg aaccaccatc acaatcagga aaataaacag aatcggcatc aaatatttca
      961 ctgaacgctc aataccgtcc acaatgcctt ttaccaaaat aaaataattc accaatacaa
     1021 aaagtgccgt ataagcaata attgtcattg ggctattaaa aatactttgt tggaagaatt
     1081 gttgggtcgt gccaacggta acaggttgag acagatctag tgtccccgtg agtaagctac
     1141 cgatataatt taatacccaa ccaccaagta ccatatagta ggcaagaata ccaaatgctc
     1201 caagcaagcc catatagcca agaattttcc aacctgaggc aattttttta ccattagcaa
     1261 aaccggcaaa agcatcaata gcattcactc tcattcggcg accaattaca ttctccacta
     1321 atatcatagg gataccaatt acgatcatcg caatacaaaa taaaaacaca taagcaccgc
     1381 ctccgtgttc ccccacaaga taagggaaac gccaagttgc accaaaaccg actgttgcac
     1441 cagcaacggt cataatatac gccaatcggt tagaccaaga ttggcgttct tgttgttgat
     1501 ttgccattta atactccatc ggctaacaat accgcttcaa ccaacaagcg gtcagatttt
     1561 tagaaaatat tacaaattaa atgaagagtg cgaataactc gccaacttta acccttgagc
     1621 ccaccttctg ccctattgaa cgctgtacct gaatttgggt aatatcggca gattgataaa
     1681 tcctacgggt aaaatcagta tcgtgatttg aaattaatac gggaacgcct aatcctttca
     1741 tttctaaagc cagtgttgcc aaacgccctt gttgctctag gctaaaacca ccgccagcat
     1801 attgcgtaaa attcgtttct tgtgctaaag gagcgtaagg tgggtcgcag taaatcacat
     1861 aatccgttaa ttgatttttt gccaactcaa agacctgttc aaaatccgca cacacaaaag
     1921 ttgccttttg tgctttttca gcaaaaaaac gtagttcttt ttctggaaaa taatgggttt
     1981 tataacgccc aaagggaaca ttgtaccctt ttttctggtt ataacggcaa agtccgttat
     2041 agccaaatcg atttaaatac aaaaaaatca ccgagcgacg aaaaatatct tttgagcgat
     2101 taaactccgc acggcgtgct ttataaaagg cttctgtatt cgcttgtggg tgaagaaaca
     2161 gttgctttgt ttgcgcaata tattcctcaa catctgcttt caccacgttg aaaagattaa
     2221 tcaagtcagg attaatatca gcaagaatat aacgttcaaa atctgtattc agaaagaccg
     2281 aacctgcacc aacaaaaggc tcgactaaac aagccttttt tggcaaatgg gtttgaatat
     2341 ctggaattaa gcgatattta ccgccagccc attttaaaaa ggctcgatgc ttagggtgat
     2401 tcatttcatt ttaaacatta acgttgggta aaacgctcaa tagaggctaa tacttgagat
     2461 tctgtggctt gcgatgaaac gtaagcttca ccaagtgatt tcaataaaat taggcgtaat
     2521 tgacctgcca gtactttttt atctcgccac atataaggta gatattctgc cggttccatt
     2581 ccatcaggtg aaattgttgg caaattggct cgggccaata atttttccaa gcgagcaacc
     2641 tcttgaggac ttaaatcccc cagaatacga gataattccg cagcctctag cataccaacc
     2701 gaaacagcct ctccgtgtaa ccatacacca tagcccatac gtgcttcaat ggcgtgacca
     2761 aaggtatgtc ctaagtttag taatgcacga tctccttttt ccgtttcatc tcgagcaacc
     2821 acgtcagctt ttagctggca acaacgctga atacaatatt ccagctcatc ttgcttgaga
     2881 ctgaccaaat catcaatatg cttttcaagc cattcaaaaa aagtaacatc aaagattgca
     2941 ccgtatttga tgacttccgc caaaccagca ctgacttctc ttttggataa ggtatggagc
     3001 gtattggtat caacaatcac agaaacaggc tgataaaaag ccccaatcat atttttaccg
     3061 agtgggtggt ttactgccgt tttcccgcct actgaagaat caacttgagc cagtaaagtg
     3121 gtcggaattt gtataaaacg aataccacgt tggtaagagg cagctgcata gcctgcaaca
     3181 tcaccgatta caccaccgcc taaagcaatt aaagtggtat cgcgattatg atttttttct
     3241 aataatgcgg taaaaatcaa atttaatgat tctagcgttt tatattcttc accgtcggga
     3301 atcaataccg aatcaacgtg gcaacccagc tcctttaacg catttgttac cacactaaga
     3361 taatgtgtcg ccaccgttgg atttgagaca atcatcacct tatctccaga ttttaatggg
     3421 ctataactag caggctgatt taataaccct gcaccaatta taatcgggta acgacgctct
     3481 tttaattcca cattgacttg taacatatct tagctccttt cttacctggc tactgtaaat
     3541 tatcaatcat atcaataatt tgatttgcca ctactttagc gctctgctcg tccgtatgaa
     3601 tagtaatatc tgcaatttct tcatacaatg ggttacggat tttcgctaac tcttccaacg
     3661 ttttacgggg gtcttctgtt tgcaataaag ggcgtttttt atctcgctga gtacgttcaa
     3721 actgtttatc cactgtcgtt tctaaataaa taacgatacc acgagccgat aacacattac
     3781 ggttatcttt agataaaatc gaaccaccgc cagttgaaag cacgatacca taattttgcg
     3841 tcagttcatt tagaatacgt tcttcacgct tacggaaacc ctcttcacct tcaacatcga
     3901 agatccaatc aatatccgca cctgctcgtt cttcgatcac actgtcggaa tccataaatt
     3961 ccatacctaa tgtttgagca agctgacgac caatcgtact tttacctgct cccatcggcc
     4021 caatcaaaaa aatattacgt ttttcagcca ttatttcttc ttcattttaa aatttactaa
     4081 acatttgatc tgtgaaatta aaagaaaaaa tgaccgcttg ttctacaagc ggtctgattt
     4141 ctttaaaaaa ttgcaataaa actcatttat tgactaagga atatccaaat ataactcaca
     4201 aatcgcccaa aataaaattg gcacttatta tcgcaagaaa tccccctatt tttcaacttt
     4261 taagagcatt atccttgtaa taaattatta gaataattca ccgcttttta gcacccctgg
     4321 tggaggtaat cctaaacgta acggcgcaga ttctgttttt tgaggcgctt tttcagtata
     4381 agctctctct acaatataac gttttgtagg ctcagtaccc ttaataaaat actctttacg
     4441 tccatttcct aagaaaccac tattagggtc aatattaacc tcaataatat tttttggaag
     4501 ggtacttttt tcgacaggct tatctgacaa tgcaactttc atataatttg tccaagctgg
     4561 taaagcagta ctagaacctg aagcacctct acctaatact cttttattat catcaaagcc
     4621 aacgtacaca acagtagaaa tattagcacc aaatcccgca taccaagttg ccttggcatt
     4681 attggttgta ccagtcttcc cgcccacatc cgctcgtttt atcgtattga gcattttata
     4741 gcttgttcct cgccagccat attcaggctc accagtaatt gctgtagcta aagcactacg
     4801 cattaaaaaa gcgagttcat cactaataac atgaggagcg taacgtaacc ctttgatatg
     4861 atgagaagat tctgccatta agctcggcgc atttttctcg ctattgttcg cttgtaattc
     4921 aggttctgaa tcgccaacat cttccacaac atcgtcgtca tcattattcg aggaattcgc
     4981 tatagtttgt acaccgactt gagcttcatc atgaattttg actgattcaa aatatttagg
     5041 ctcagggtaa acaactgggc tatcgcaact attacaagct actacaggat ttgcttgata
     5101 taactcgtag ccttgggcat caataatacg gtcaatgata tatggttcaa tcaaataacc
     5161 tccattatta aatactgcat aagctcgagc catttctaat ggcgtaaaag atgcagcacc
     5221 caatgcaaga gattctgttg caacatactg atttcggtta aagccaaaac gttgtaagta
     5281 gtctgcaaca taatcaatcc ctgccatttg taatatacga atagccacca tatttttcga
     5341 tttacctaat gcaacacgag ttctcaacgg gccgccataa accccatcgg catttttagg
     5401 tcgccactct ttttgccctt tctttttaat gacaatagga gaatcgctaa ttgttgttga
     5461 aagacttagc cctttattca ttgccgctgt gtaaataaac ggtttaatcg cagagcctac
     5521 ctgaactaat gactgagtcg cacgattgaa acggctttgt tcaaagctaa agcctccaac
     5581 gatagattca atggcaccgt tttcactatt aattgacact agggctgaat ttacctccgg
     5641 aatttgtcct aaagcccact ccctattttt attttgacgt acccaaattt gttcacctgc
     5701 ttttaaccct ttaggtgcaa aagaagcatt tgtacgtttt aaaacagaga tatcaccatt
     5761 tgccaataaa attgtatatt ttgatttatc tgcttgcatt acaacagctg gtgtaaacgg
     5821 ctctgatttt ggcagcttac ttaaatgatc gataattttc tcatcgtccc aagcagaact
     5881 acctgtccat aatttttcag cgcctcgcca accatgacgg cggtcataat caatcaaatt
     5941 ttcacgtaac gcatcttgtg ctgctttttg gtctgctgaa agtaccgtgg cgtacacttt
     6001 taagcctttg ttataagcaa tattttctcc atagcgtttc acaatttctt gacgaaccat
     6061 ttctgtcaca taatccgctc gaaattctaa tgtcgcacca tagtagttag ctactactgg
     6121 ctctgcttta gctttctcat attcctcttt tgtaatatct ccggtttcta gcattctccc
     6181 aagcactaca ttacgacggt cttccgcccg ttttactgaa taaagtggat tcatcgttga
     6241 aggcgctttt ggaagccctg caataattgc tatttcagaa agggttaaat ctttcaaaga
     6301 tttattaaaa taagttttag ccgcagcggc aacaccgtga gaacgatacc ctaggtaaat
     6361 tttgtttaaa tacagctcca gaatctcatt tttactgaga acctgttcaa tttctaaagc
     6421 taaaattgcc tctttggcct tacgctctaa actacgttca ggtgttaaga aaaagttttt
     6481 cgccagctgc tgggtgattg tacttgcgcc ttgagtatct ccctggctag tgcgccatat
     6541 tgcacgcata atacctttag gatcgatccc tttatgctcg taaaaacgtg catcttcggt
     6601 agcaagaatc gcttttacta acatcggtgg aatatcatca agcttgaccg gaatacggcg
     6661 ttcttctcct acttcaccaa ttaatttacc atctaaggta aaaatctgca taggctgctg
     6721 taactctaca tttttcagcg ttgccacatc aggcaaatca gatttgaaat gcatgtacag
     6781 taaaccacca attaccccac ctaaaaccaa gagtgaaagt aaagcactaa atattatttt
     6841 tgcgatccgc atcgaaaaaa tctcttttgg ttaatgacga aacataaatt taaagccaat
     6901 attaggtcac taagtataag ctaaaaacgc ttacttcgca taactaattg caaaactttc
     6961 cttactatac ttactatgaa attacttaaa gcacattcaa aaacaccttc aaaccgtatc
     7021 atcttaggct taagtgaaga tgaacaacgt tactgcttag tcaaaaataa agcagaaaaa
     7081 ttcaccgttt tttggcaagc caagcctgcg agcatcgaag agcttatcgg taatctcacc
     7141 ccacaagaac aagcaatgat gacgctggtt cgcccgatcc cttaccaata catttggcga
     7201 aaaaccgttt ttatggctaa caccctcaat gaagctcaat tacaccgtaa ggtaattcac
     7261 attttaaaaa atgagcagcc acttgcattg gatctactca atattgacta tcagcgattt
     7321 ccaagcagca acgataatct ggataaagtg gttatctacg ccgtgcgaaa aagttatacc
     7381 gagaatttga gccaatttaa cagcatctta gattgtgagc tgcattgcta tgcacgggct
     7441 ataattcatt taacacaatc ccaaaataat cagcctgcgc cctgtttttc atttaaacag
     7501 aagtacttcc aatttaccga gacggaatta ctgatattgc aaacagaacc tgaggattgt
     7561 attcatctat ctgatctcaa aattgaccat cttgaaatcg agtgtgagca agagaaacag
     7621 ctatattgcc tcgccttagg agcaagttta tggaatggca aggtattgat ttaagtgcta
     7681 atcgaaaaaa taactggttt gccggcagtg ataaaggcat caaaaacgtg atttatacac
     7741 ttttattatc tgccctcatt agcttggctc tgatttttct ctatttgcaa aaaaatcaag
     7801 aaattcaacc gcttgcacag caattagagc tggtaaaaac cgatatatta aatattgaaa
     7861 ataaaattat cagcttgaat agtaatcata caaacacctt gccctttgcc gagcctaaaa
     7921 aaatagcaca actactggca ataatagata acttaccgct caaaaatggg ggaattgaaa
     7981 cgatacaaat ttatcttgaa accgatctct atttaaaaat aatcggtaat ttagataatc
     8041 aatctgattt tcaaagtcta gaatcttatt tatatcagca agatttattt gaaaccaaaa
     8101 ccgagcaaat taatgttaat cataaaaatg aa
//
LOCUS       DANLZQ010000110         7946 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.110, whole genome shotgun sequence.
ACCESSION   DANLZQ010000110 DANLZQ010000000
VERSION     DANLZQ010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7946)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7946)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7946
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.110"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            69..203
                     /locus_tag="PXE50_002180"
     CDS             69..203
                     /locus_tag="PXE50_002180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/trimethylamine N-oxide reductase
                     NapE/TorE"
                     /protein_id="HDL5623046.1"
                     /translation="MRSELLKTLLLSGLILPLLMAFAVGAYGFIVWMLQLFVIGLPGA
                     "
     gene            207..1370
                     /gene="torC"
                     /locus_tag="PXE50_002181"
     CDS             207..1370
                     /gene="torC"
                     /locus_tag="PXE50_002181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentaheme c-type cytochrome TorC"
                     /protein_id="HDL5623047.1"
                     /translation="MLGSIKALFTRPATKIGLGVLVGIGFIAGAISWHQFNKAMDHTS
                     TEEFCVSCHSMQQPLEELKKTAHWSNKSGVTATCSSCHLPHDYTEKYARKVQASREAW
                     AELSGKYKEEGSFEKHRLEMAEREWARFAANGSKECKACHSYERMNFDKMGEAARKAM
                     KPAAEKDQSCMDCHKGIAHHLPKADENALKSKFDQFVNKSPNQGKSYYTKGNAELFLD
                     EGLSQAIGQLETAVPVAFVQAGKNADLVELTMWRKEKGFGRIWYHDFGKNITDAVLTK
                     EFMANQPKFEVLETKEDPITGLNWQKVKLQAWIGKAQLLDDVTPIWANAENQYKTQCS
                     TCHRQPDVAHFDSNSWIGLFNGMVGFTNMDKQTGKEVLRYLQMHASDSEEAKH"
     gene            1470..3935
                     /gene="torA"
                     /locus_tag="PXE50_002182"
     CDS             1470..3935
                     /gene="torA"
                     /locus_tag="PXE50_002182"
                     /EC_number="1.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethylamine-N-oxide reductase TorA"
                     /protein_id="HDL5623048.1"
                     /translation="MQQSRRQFLKNMSVMAAAVTMPNFLVPRNVFASEDLSQWKVSGS
                     HWGAMRAKIENGRVAEIKPFEFDKHPTEMLNGIKGLIYSDSRIRYPMVRLDWLKNRHN
                     SNTAQRGDNRFVRVTWDEALDLFYQELERVQKEYGPWALHTANVGWRSTGQFHSCGNH
                     MIRAIAMHGNSVGTAGDYSTGAGQTILPYVLGSTEVYSQGTSWEIILKESENIIFWAS
                     DPVKNLQVGWNCETHEAYAYLEKLKEKVAAKGVNVICVDPVKSKTQNFLGCEQQYINP
                     QTDVPFMLALAHTLYTENLYDKKFLDMYTVGFEKFLPYLLGETEDKVAKTPEWAAEIC
                     GISADKIREFARMLAGKRTQFIFGWAIQRQQHGEQPYWMGAVLASMLGQIGLEGGGIS
                     YAHHYSSIGIPESGAAMPGAFPLNIDEGQTPKYDNKDYKGYSDTIPVARMTDSLLHAG
                     ETIDYNGKKVTYAPFKMAIFTGCNQWHRHSERNKMKQAFQKLETIVSINYSWTATCRF
                     SDIVLPACTPFERNDIDAYGSYSNRGVIAMHKLVDPLYDSRSDFEIFRDLCRRFGKEK
                     EYSRGMDEMQWVEKLYKDCRRENRGKFEMPEFAEFWQKGYVLFPEGKPWVRHADFRED
                     PELHALGTPSGFIEIYSNKIASFGYDDCKGHPMWFEKAERSHGGKNSDKFPYWLQSVH
                     PDKRLHSQLCESKELRETYSVQGREPLYINPQDAAKHGIQDGDLVRVFNDRGQAIVGA
                     VLSDNFPTGVVRLQEGAWYSPLDESVGAIDTYGDPNTMTLDIGTSKLAQAVSANTCLV
                     NIEKFIGNAPAPNGFNGAIEVTA"
     gene            3935..4525
                     /gene="torD"
                     /locus_tag="PXE50_002183"
     CDS             3935..4525
                     /gene="torD"
                     /locus_tag="PXE50_002183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD"
                     /protein_id="HDL5623049.1"
                     /translation="MTLAISREERQFIYGWFNAMLARELSDEQLNALQAGEFDDFFAY
                     LSELGFAEQVAKFQAEVTACRQLEFPRLELAADFAQLFLLEGNLSAIPYASAYLSGEA
                     LAKNLAEMDRLLGEFGLQVNRETKEPSDHLCVYLTLFDRLLAEKPLETQQQFLQNQLM
                     SWLPAWFAKAKTVKTNTGVYPALLRLFEQVLLKEQR"
     gene            4665..5354
                     /locus_tag="PXE50_002184"
     CDS             4665..5354
                     /locus_tag="PXE50_002184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HDL5623050.1"
                     /translation="MQNNKTTYLNWYDLCVLTLILFGEAIYTSTQQYFITTEMQGNFE
                     ENLTFSNEQNYWALLTQLALLLIAMGYLKWRNFDFSRWVIRPSWLAFFSGIGLFILLS
                     LAMDLYFETLYGVYNLVYPEPFWAVLREVNISTVLYAILNGFYEEIFFLGICLAVKPE
                     YLKWAVIYSLIIRVSFHTYQGMESALGLGIWLGLIIYLLYSRSKQKNLFPFWVAHSIA
                     DILGLSLLAYF"
     gene            5512..6336
                     /locus_tag="PXE50_002185"
     CDS             5512..6336
                     /locus_tag="PXE50_002185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015586989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HDL5623051.1"
                     /translation="MKSIKKLTLATLILVGLTACGSGGSGSSSNNAKSKPQVELKKTE
                     EDKKTEEDKKTEEDKKTEEDKKTEEDKKAEEAKKIAEAKGIGNKEYKDGLNELEEKNE
                     TGKNGEEIRTHGYLYNSHYSVVTAKMKQTLQENGRQMEPTVEVKGLKTENLPTEGKAT
                     YKGEAFDSHGNNSNSVVGGELIYNVDFSSRTGSGLVKNVQGGSIELAQGEIKNDSIIA
                     SAHQKYNDQAVGNGSYNIQFFGPNAEEIGGKIELNGEGEGSMKQMLGIAGTREEQK"
     gene            6385..7779
                     /locus_tag="PXE50_002186"
     CDS             6385..7779
                     /locus_tag="PXE50_002186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HDL5623052.1"
                     /translation="MYKKHFLFLLVSPLVMAETVEFQQDPKEFDGQRQAVKFEQEIAK
                     KDLKLTAYLEEDNSLKGIEQHINQAILRQDWAKLERLLGDYAKQEQFDPLLLDYALAA
                     LAYAKKDYRSAAFYYQQLLKKQPDLTYPRFDLALILKEDYRYREAEQEFKQLKTDDLR
                     NAVNSALAQIEEEESWKPDFYLQYTQTNNVNNASSSPTVNVNGRIFIKESDSLPQSAK
                     GVRYGVGLSKMRNIGGNHFVGVDLGYNGVYYWNNHDYSEQSVSLTPKYSYRTATYRIG
                     VSPFIEQNWLGSSRYNYQFGSSINAVKLFERGLISGSFSHLQKRYSEQHIADRYNGYR
                     NQLTLGTQWQAVKNWRFFANLNASREITREKAQSSNKWLATIGVIYQTPSWASSVSVG
                     YGKRYFADKHYLFGYKRQDKEYQANVAVWNRSWHWQGIVPKLNFRYQKIDSNIADFYS
                     RSNKEVFMTLEKLF"
BASE COUNT         2430 a         1593 c         1872 g         2051 t
ORIGIN      
        1 atatcaaggc aaattgtttc tgaagataaa ataattaaca cttattagtt aataaaaaag
       61 gagttgaaat gcgttcagaa ctattaaaaa cgcttttgct atcagggctg attttaccgc
      121 tattgatggc gtttgccgta ggagcttacg gctttattgt gtggatgtta caactgtttg
      181 ttattggttt accgggagcg tagaaaatgt taggttcaat caaagcatta tttactcggc
      241 ctgcaaccaa aatcgggttg ggagtgttag ttggtatcgg ttttattgcc ggagcaatta
      301 gctggcatca atttaataaa gcgatggatc ataccagcac tgaagagttt tgcgtgagtt
      361 gccactcaat gcagcagccg ttagaggagc ttaaaaaaac cgcccactgg tcgaataaaa
      421 gcggggtaac ggcaacctgt tcaagctgcc acttaccgca cgattatacc gaaaaatatg
      481 cccgcaaagt gcaggcaagc cgtgaggcgt gggcagaatt atccggcaaa tataaagaag
      541 aaggctcatt tgaaaaacac cgcttagaaa tggcagagcg tgagtgggca agatttgccg
      601 ccaatggttc aaaagagtgt aaggcttgcc acagctatga gcgaatgaat tttgataaaa
      661 tgggcgaagc agctcgtaag gcaatgaaac cggctgcgga gaaagatcaa agttgtatgg
      721 attgccacaa aggcattgct caccacttac cgaaagccga tgaaaatgca ctgaaatcga
      781 agtttgatca gtttgtgaat aaatccccaa accaaggcaa atcttactac accaaaggga
      841 atgccgaatt atttctagac gaaggtttaa gccaagctat cgggcaatta gaaaccgccg
      901 tgccggtggc atttgtgcaa gcgggcaaaa atgcggattt ggttgagctg acaatgtggc
      961 gtaaagagaa aggtttcggt cgcatttggt atcacgattt cgggaaaaac attaccgatg
     1021 cggttctaac caaagagttt atggcaaatc agccgaaatt tgaggtgttg gaaaccaaag
     1081 aagatccgat taccggcttg aattggcaaa aagtgaaact acaagcgtgg attggcaaag
     1141 ctcaattatt agacgatgtt accccaatct gggcgaatgc agaaaaccaa tacaaaaccc
     1201 aatgtagcac ttgccacaga cagcctgatg tcgcccactt cgattccaac agctggatcg
     1261 gcttattcaa cggaatggtc ggctttacca atatggataa acagaccggc aaagaggtgc
     1321 tacgttattt acaaatgcac gcctccgata gtgaagaagc gaagcattaa taatattact
     1381 cccctcttta ctaaagaggg gaattaatcg agcgttgaat aacattctct gtactagctc
     1441 acgtttttac aaataaagaa ggacaagata tgcaacaatc tcgccgtcaa tttttaaaaa
     1501 atatgtctgt gatggctgcc gctgtcacaa tgccgaattt cctcgtgcct cgcaatgtgt
     1561 ttgcgagtga agacctcagt caatggaaag tttccggctc tcactggggg gcaatgcgtg
     1621 ccaaaattga gaacggacga gtggcagaaa tcaaaccgtt cgagtttgat aaacacccga
     1681 ccgaaatgct caacggcatt aaaggcttaa tttacagcga ttcccgtatc cgctacccga
     1741 tggtgcgttt agattggctc aaaaaccgcc ataacagcaa caccgcacag cgtggcgata
     1801 accgctttgt gcgggtaacg tgggacgaag ccctcgacct gttctaccaa gagttagaac
     1861 gggtacaaaa agagtacggc ccgtgggcgt tacacaccgc caatgtgggc tggcgttcaa
     1921 ccggtcaatt ccacagttgc ggtaaccata tgatccgagc gattgcgatg cacggtaaca
     1981 gtgtcggcac ggcaggcgac tattctaccg gtgcagggca gaccattctg ccgtatgtgc
     2041 tgggttcaac cgaagtctat tcgcagggca cgtcttggga aatcatctta aaagagagcg
     2101 aaaacatcat tttctgggca agcgacccgg tgaagaacct gcaagtgggt tggaactgcg
     2161 aaacccacga agcctatgcc tacttggaaa aactgaaaga gaaagtggca gcaaaaggcg
     2221 tgaatgtgat ctgtgttgat ccggtgaaaa gcaaaaccca gaatttctta ggttgcgaac
     2281 agcagtacat caatccacaa accgatgtgc cgtttatgtt ggcacttgcc cacacgctct
     2341 acaccgagaa cctgtacgac aaaaaattct tggatatgta cacggtcggc tttgaaaaat
     2401 tcctgccgta tctgttaggc gaaaccgaag acaaagtggc gaaaaccccg gaatgggcgg
     2461 ctgaaatttg tggtatttcc gccgacaaaa tccgtgaatt tgcccgaatg cttgccggca
     2521 aacgcaccca atttattttc ggctgggcaa ttcaacgcca acaacacggc gaacaaccgt
     2581 actggatggg agcggtgcta gcctcaatgt tagggcaaat cggcttggaa ggcggcggca
     2641 tcagctatgc tcaccattac agctctatcg gtattcctga atccggtgcg gcaatgccgg
     2701 gggcgttccc gctcaatatt gatgaggggc aaaccccgaa atacgacaac aaagattaca
     2761 aaggctacag cgacaccatt ccggtggctc gtatgaccga cagcttgctc cacgccggcg
     2821 aaaccattga ttacaacggc aaaaaagtga cttacgctcc gttcaaaatg gcgattttca
     2881 ccggctgtaa ccaatggcac cgccattccg agcggaacaa aatgaaacag gcgttccaaa
     2941 aactggaaac cattgtttcg atcaactaca gttggacggc aacctgccgc ttctccgaca
     3001 tcgtgctgcc ggcctgtacc ccatttgaac gcaacgatat tgacgcctac ggctcataca
     3061 gcaaccgtgg cgtgattgca atgcacaagc tggttgatcc actctacgac tctcgctccg
     3121 actttgagat tttccgagat ctctgccgcc gtttcggtaa agagaaagag tacagccgtg
     3181 gaatggacga aatgcagtgg gtagaaaaac tctacaaaga ttgtcgccgt gaaaacagag
     3241 gtaaatttga aatgccggag tttgctgaat tttggcaaaa aggctatgtg ctgttcccag
     3301 agggcaaacc ttgggttcgc cacgccgatt tccgtgaaga tccggaattg cacgcacttg
     3361 gcacaccgtc cggctttatc gaaatttaca gcaacaaaat cgcctctttc ggctatgacg
     3421 attgcaaagg tcacccaatg tggtttgaga aagccgaacg ttcacacggc ggtaaaaatt
     3481 ccgacaaatt cccgtactgg ttgcaatcag ttcacccgga caaacgctta cactctcaac
     3541 tttgtgaatc gaaagaactg cgtgaaactt acagcgtgca agggcgtgaa ccgctttaca
     3601 ttaacccaca agatgccgcc aaacacggca ttcaagacgg agatttagtg cgagtgttta
     3661 acgaccgtgg gcaagcgatt gtgggggcgg tgctttccga caacttcccg accggcgtag
     3721 tgcgtttaca agaaggggct tggtattcac cccttgacga aagcgtgggg gcgattgaca
     3781 cctatggcga cccgaacaca atgaccctcg acatcggcac gtccaagttg gcacaagcgg
     3841 tttccgccaa cacttgcttg gtgaacatcg agaaatttat cggcaatgcc ccggctccga
     3901 atggctttaa cggtgcgatt gaggtaacgg cttaatgacg ttggcaatca gtcgtgaaga
     3961 acggcaattt atctatggct ggtttaacgc aatgctcgcc cgagaacttt cggacgagca
     4021 gttaaatgcc ttacaagcgg gcgaatttga cgattttttt gcatacctca gcgaattggg
     4081 ttttgccgaa caggttgcaa aatttcaagc agaagtgacc gcttgtaggc agctggaatt
     4141 tcctcgtcta gaactggcgg ctgactttgc ccaactgttt ttattggaag gcaatctcag
     4201 tgccattcct tacgcctccg cctatttaag cggcgaagcg ttagcgaaaa atttggcgga
     4261 aatggacaga ctgctgggcg aatttgggct gcaagttaat cgagaaacca aagagccgag
     4321 cgatcacctt tgcgtttatc tcaccctttt tgaccgcttg cttgctgaaa aaccgttgga
     4381 aacgcaacag caatttctgc aaaaccaact gatgagctgg ctccctgcgt ggttcgccaa
     4441 agccaaaacc gtcaaaacta acaccggcgt ttatccggcg ttgctaaggt tgtttgaaca
     4501 ggtgttgctg aaggaacaaa gataaagtta tttatttgag aatgatttgt attgagcgaa
     4561 ttgagaaagg aagttaaaat ttcaacttcc ttttttattg gctggattta tccacattat
     4621 tacaagcggt tatttttata aaaaaattta caaaggagac attaatgcaa aataataaaa
     4681 ccacctacct aaattggtac gatttatgcg tgctaaccct gatcctgttt ggtgaggcaa
     4741 tttatacctc aacccagcaa tatttcatca ccaccgaaat gcaaggtaat tttgaagaaa
     4801 atttaacctt ttcaaatgaa caaaattatt gggcattact gacgcaactt gcattgttgc
     4861 tgattgcaat gggctatcta aaatggcgga attttgattt cagccgttgg gtgattcgtc
     4921 cctcttggct ggcttttttt agcggtatcg ggttgtttat cttgctctcg ttagcgatgg
     4981 atctctattt tgaaacatta tatggtgttt acaacctagt gtatccggag ccattttggg
     5041 cagtattgag agaagtgaat atttctaccg tgctgtatgc gattttaaac ggcttttatg
     5101 aagaaatctt tttcctcggt atttgcttgg cggttaaacc tgaatattta aaatgggcgg
     5161 tgatttattc actgattatt cgggtgagtt ttcataccta tcaaggaatg gaaagtgcgt
     5221 taggattagg aatttggctc ggtttaatta tttatttgct ctactcacgc tcaaagcaga
     5281 aaaacctatt tccattttgg gtggcacaca gtattgcgga tattttgggg ctgagtttgt
     5341 tggcttattt ttagttaaag gtgctacatt taagcggcat aagttgatag atctgatcgt
     5401 accagtagca taaaaacatt attatttgta tggaaaggtg cttttaggtt acaatataac
     5461 cgatagttat tggttataac taaaaattat ttttaattta acggagcaaa tatgaagagt
     5521 atcaaaaaat taaccctagc cactttgatt ttagtgggtt taactgcttg tggtagcggt
     5581 ggttcaggta gcagttctaa taatgctaaa tcgaaaccac aagttgagtt aaaaaaaact
     5641 gaagaggata aaaaaactga agaggataaa aaaactgaag aggataaaaa aactgaagag
     5701 gataaaaaaa ctgaagagga taaaaaggct gaagaagcaa aaaaaattgc agaggcaaaa
     5761 ggaattggca ataaagaata taaagatgga ttaaatgagt tagaagaaaa aaatgaaaca
     5821 ggtaaaaacg gagaagagat tcgaacccat ggttatctct ataacagcca ttattccgtt
     5881 gtaactgcca aaatgaaaca aactttacag gaaaatggtc gtcaaatgga acctacggtt
     5941 gaagtgaaag ggcttaaaac tgagaattta ccgacagagg gcaaagcaac atataaagga
     6001 gaagcctttg attctcacgg taataacagc aattcagtag taggtggaga attaatctat
     6061 aatgttgatt tctctagtcg taccggatca ggtctagtta aaaatgtaca gggcggttct
     6121 atcgagttag cacaaggcga aataaaaaat gatagtatta tagcttctgc tcaccaaaag
     6181 tataatgatc aggctgttgg aaatggtagt tacaatatcc aattctttgg tccaaatgca
     6241 gaagaaattg gagggaaaat tgagcttaat ggtgagggcg aaggctcaat gaagcagatg
     6301 ttaggtattg caggaacccg agaagaacaa aaataacatt taatacccaa tgccgtttaa
     6361 tcttaaacgg cattcttttt tactatgtat aaaaaacatt ttctattttt acttgtttcg
     6421 cctttagtaa tggcggaaac ggttgagttt cagcaagatc ccaaagagtt tgatgggcag
     6481 cgacaagcgg ttaaatttga gcaagaaatt gcaaaaaagg atttaaaatt aaccgcttac
     6541 ttggaggaag ataattctct taaaggtatt gaacagcaca ttaaccaagc gattcttaga
     6601 caagattggg cgaagctgga aaggctgctt ggcgattatg caaagcaaga gcaatttgat
     6661 ccgctacttt tagactatgc tttggcggca ttggcttatg ctaaaaaaga ttatcgctct
     6721 gcggcgtttt attatcagca gttgctgaaa aaacagcctg atttaaccta ccctcgtttt
     6781 gatttggctc tgattttaaa agaggattat cgctacaggg aagcagagca agaatttaag
     6841 caactcaaaa ccgatgattt acgcaatgcg gtgaacagtg cgttggctca aatagaggag
     6901 gaagagagct ggaagccgga tttttatttg caatatactc aaaccaacaa tgtgaataat
     6961 gcttcttcgt cgccaacggt aaatgtaaac gggcggattt ttattaaaga atcagacagc
     7021 ttgccgcagt cggcaaaagg cgtaagatat ggcgttggct tgagtaaaat gcgaaatatc
     7081 ggcggtaatc attttgtggg agtcgatctt ggctataacg gcgtttatta ctggaataac
     7141 cacgattata gcgaacagtc ggtctcacta acaccaaaat atagctacag aacggcaact
     7201 tatcgtatcg gggtttcgcc ctttattgag cagaattggc tgggtagctc acggtataac
     7261 tatcaatttg gtagcagtat caatgctgtt aaactttttg aacgagggct gatttccggc
     7321 tcattcagcc atctgcaaaa acgttatagt gaacagcata ttgccgaccg ttacaatggt
     7381 tatcgcaacc aactcacgct aggtacgcaa tggcaagcgg tcaaaaattg gcgatttttt
     7441 gcaaatctta acgctagccg tgaaattacc cgtgagaaag ctcaatcttc caataagtgg
     7501 ctggcgacca ttggcgtaat ttaccaaacc ccaagctggg caagttcggt aagtgtcgga
     7561 tatggcaagc gttattttgc tgataaacat tatctgtttg gctataaacg ccaagataag
     7621 gaatatcaag cgaatgtggc ggtgtggaat cgaagttggc actggcaagg gattgtgccg
     7681 aaattgaatt tccgttatca aaaaatcgat agcaatattg ccgatttcta ctctcgtagc
     7741 aataaagaag tctttatgac cttagagaaa ctattttaag gctgtgtatg aatgtcgggg
     7801 agaaaaattt tctccccgat atttatgtgt agaagatcag acttgatctg acaattcact
     7861 ctaaaaagtg agagtttccc gtttagaata tgagtgtcaa aaatcaatct aaacaaaaag
     7921 gaaactctca tgttttattc taacaa
//
LOCUS       DANLZQ010000111         7588 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.111, whole genome shotgun sequence.
ACCESSION   DANLZQ010000111 DANLZQ010000000
VERSION     DANLZQ010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7588)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7588)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7588
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.111"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(<1..707)
                     /locus_tag="PXE50_002187"
     CDS             complement(<1..707)
                     /locus_tag="PXE50_002187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005712160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL5623053.1"
                     /translation="MSIYRRKANGPWWVDITTPNGKRIKRSTRTLVKREAQQYHDKLK
                     QEMWAEDKLEEKRKYIFEDALLHYVRAAEELKDKATKKRHAEYWLSKFAGRELSSLTA
                     QEIILNIPKKNANTKKPLSHSTQNKYVKSLSRVLNIAHKLGMLDAVPHIPKKKEPPIR
                     VRWITKEQAKQLIDKLSSDWMKSICKFALMTGARRTEILTMTWDKIDLVRKVAIVTND
                     VAKSGKARSLLLNQEAI"
     gene            complement(611..934)
                     /locus_tag="PXE50_002188"
     CDS             complement(611..934)
                     /locus_tag="PXE50_002188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5623054.1"
                     /translation="MEHLTINQVAKELNCHPNTVRQHLADWGFFKMVGSEVWRINRED
                     LERAKKRAGIDPIRKRSDNDRGLSLSVEENEKCRSTDEKQTVRGGLISQPQTARELRE
                     ALARL"
     gene            complement(1015..1182)
                     /locus_tag="PXE50_002189"
     CDS             complement(1015..1182)
                     /locus_tag="PXE50_002189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HDL5623055.1"
                     /translation="MQFTYGSICSGIEATSIAWHGLGKPLWFSEIEPFPCAVLAHRFP
                     NVPNGNGMAVP"
     gene            complement(1190..1564)
                     /locus_tag="PXE50_002190"
     CDS             complement(1190..1564)
                     /locus_tag="PXE50_002190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623056.1"
                     /translation="MHIEDKIAWWLANGETGVSSKTMAFYLGYGIRPKIEGYPHDVSD
                     FRRCFLLLETVPFLRNRIEKMAELGKVWAALAKEWHTLEALYNEEECQIRCPKTYAKL
                     REILEANEENVVRIGNLSISIG"
     gene            1714..1941
                     /locus_tag="PXE50_002191"
                     /pseudo
     CDS             1714..1941
                     /locus_tag="PXE50_002191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609911.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit family protein"
     gene            1966..2361
                     /locus_tag="PXE50_002192"
     CDS             1966..2361
                     /locus_tag="PXE50_002192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5623057.1"
                     /translation="MKIHTQIRKEILSLLEAKLTDIEHFYNGQPNFIDIDEQQLAISV
                     YLDEINRQELTLCDEQWTAQLNITIYLKSVDEAEDELDEWAEKIREVVETYSAFEHLE
                     GISLSQYQYEQDQNQRTWHSATLIFDVEY"
     gene            2393..3034
                     /locus_tag="PXE50_002193"
     CDS             2393..3034
                     /locus_tag="PXE50_002193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623058.1"
                     /translation="MAKTTKVQGTKFRIGIGREAQKAITAITLATATLTIATSGYKKG
                     DAIEITGCGQLDGIYPVLSVTGDQVKLCEEVNWTGKDLPANYTKAKAALVQYSDQFCA
                     VKNIEKSDDTLSTEDVTTVCSEGTETEPGEIEFGSIKLSFFHKPSTEMQTRLRKLFYD
                     KSTFAYKLELPDNHGTTYGEGFIEAGNGFSGEVKGKYEGSVSIKPSKRDYLLV"
     gene            3117..3518
                     /locus_tag="PXE50_002194"
     CDS             3117..3518
                     /locus_tag="PXE50_002194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623059.1"
                     /translation="MTLREKLLANKPKLQSIEINGETYYLREATVGDMNKQIFETRSW
                     LIQQAEQENVELPAEDDETFDEALNRFGEKYRLAQSVAYRLCDENGALLFNPLNIDDL
                     NAIAELDSKVIIDFNQAVSAPKDSASEESSK"
     gene            3563..3793
                     /locus_tag="PXE50_002195"
     CDS             3563..3793
                     /locus_tag="PXE50_002195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4035 domain-containing protein"
                     /protein_id="HDL5623060.1"
                     /translation="MPERHFAEYQLFYQEQPFGLWREDYRAAQLAHLTAMINRDPKGK
                     APELSEFMPFFNRADEVEANEDDGVADYLAKR"
     gene            3861..4127
                     /locus_tag="PXE50_002196"
     CDS             3861..4127
                     /locus_tag="PXE50_002196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelB/DinJ family
                     antitoxin"
                     /protein_id="HDL5623061.1"
                     /translation="MATINDAFSFRTNTEIKNTAFDVIKNYGMTPSQVFNMFLTEIAK
                     TKTIPLSLNYQPNLETKLAMQEAKSGKNEVYASLEAFHKAMLAE"
     gene            4131..4400
                     /locus_tag="PXE50_002197"
     CDS             4131..4400
                     /locus_tag="PXE50_002197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system mRNA interferase
                     toxin, RelE/StbE family"
                     /protein_id="HDL5623062.1"
                     /translation="MLQISPTNAYKRDFKKIAAELVGSSEYVEVMYCLINQLPLAEKY
                     RDHPLQGEWQGFRDCHIKPDLVLIYAVEDNLLRLVRLGSHAELFG"
     gene            4475..4738
                     /locus_tag="PXE50_002198"
     CDS             4475..4738
                     /locus_tag="PXE50_002198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623063.1"
                     /translation="MKNVLLFIVHFFLIAMLSIIPILIILGAIERDPYYTAWIFLSVF
                     LGIGALLYFATIVSKLINKGKTQTLEEKRYAEYWNNVKVNIPK"
     gene            4798..5508
                     /locus_tag="PXE50_002199"
     CDS             4798..5508
                     /locus_tag="PXE50_002199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tape measure protein"
                     /protein_id="HDL5623064.1"
                     /translation="MSGLGKLTVTLELENAKFQSAMTKSDYEAQKFAKNFIQNMDRAR
                     NHAKEFADRSTQYLKNIEQAAKNLNKNSEFSFLSTIGGHYQSMSSGILSAAKAYTDIQ
                     NKMKLVSGSSAEAAKRLTDVFDIATKTSQSTEAVSGVYQTFAQNAQSLGLAQKDVAEL
                     TKTVSQAVAASGASSSAASNALTQFGQSLLMGKMKAQEFNSLITQTPTIIQAMAKGLG
                     MTMAEFKAAVYRAKSLLG"
     gene            5486..5776
                     /locus_tag="PXE50_002200"
                     /pseudo
     CDS             5486..5776
                     /locus_tag="PXE50_002200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484718.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
     gene            5766..6485
                     /locus_tag="PXE50_002201"
     CDS             5766..6485
                     /locus_tag="PXE50_002201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HDL5623065.1"
                     /translation="MKFSKYQLLVNKICFICGKKDCPQMKKSKDYKDFLDALEKGDVD
                     KADKIYNTKFSQFSKSFGHEMEKNLEKNRIPPIYQGVPFDSFDLYQHYSYGNGEALNL
                     SSVGLSNKIRPLVNKDKAFGKSNGSIESRFISQYKNEGRTSFSNAYDFTKEASGIADP
                     LWALGTATISGELKDIQIFPGGIARGNIHYSIRDRFTDPFDTFNFTKGEWNPNGTPYI
                     IQDSWIKSVRFSIDKKIKITP"
     gene            6707..7333
                     /locus_tag="PXE50_002202"
     CDS             6707..7333
                     /locus_tag="PXE50_002202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HDL5623066.1"
                     /translation="MTKIKFYGNLKKFGSEFSLEVKDTAEAIRALCTQISGLREALRD
                     GVYKVRIGKQYLDPSALEKGLFYCLKKGQTIHFTPVIKGAKSGGVFNFVLGAALIGAA
                     FFTGGASIAAWGAGAKMMGMLGASMLLGGVSQMLTKMPKAPTMGNETEKESSTAFSNL
                     NNLVTQGKPVPLAYGLIRTGSLVISQGVETITIKENQPASNKKTGFRK"
     gene            7382..>7588
                     /locus_tag="PXE50_002203"
     CDS             7382..>7588
                     /locus_tag="PXE50_002203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5623067.1"
                     /translation="MNLTKAESNLNAKITEEKKARVDADKVNADKLTDITSRVANAES
                     TITNFQSTKANKSEVASLAQSSLQA"
BASE COUNT         2456 a         1463 c         1480 g         2189 t
ORIGIN      
        1 ttaattgcct cttgattcag taatagcgat cgtgccttac ctgatttagc gacatcatta
       61 gtcacgattg ctacctttct tacaagatct atcttatccc aagtcattgt caaaatttct
      121 gtccgtctgg ctccagtcat caaagcaaac ttacagatag atttcatcca gtctgaactt
      181 aatttatcta ttagctgttt tgcttgttct ttggtgatcc agcgtacacg aattggcggc
      241 tctttctttt tcggtatgtg tgggactgca tccaacatac caagtttatg agcgatattt
      301 aatactctcg ataaagattt cacatactta ttttgcgtac tatgagatag aggctttttc
      361 gtatttgcat tctttttcgg gatatttagg ataatctcct gagctgttaa agagctgagt
      421 tcacgaccgg caaatttgga taaccagtat tcagcatgtc gcttttttgt ggctttatct
      481 tttaattctt cggccgcacg aacgtaatgg agcaaagcat cttcaaagat atattttctc
      541 ttttcctcga gtttatcctc tgcccacatt tcttgcttga gtttatcgtg atactgctga
      601 gcttcacgtt ttacaagcgt gcgagtgctt ctcttaattc tcttgccgtt tggggttgtg
      661 atatcaaccc accacggacc gtttgctttt cgtctgtaga tcgacatttt tcattctcct
      721 cgaccgacag agataaccct cggtcattat cagatcgttt tcttattggg tcaataccgg
      781 ctctcttttt tgctctttcc aaatcttctc ggttgatccg ccaaacttcc gagcctacca
      841 ttttaaaaaa tccccaatcc gccaaatgtt ggcggactgt atttggatgg caatttaatt
      901 cttttgccac ttgattaata gtaagatgtt ccattcatta ctttctccaa aataaatccc
      961 tctaaacgag ggattgtact aaataatcgt taagtctttg ccttatccac tgcatcaagg
     1021 cacagccata ccgtttccat ttggcacatt ggggaaacgg tgagctaata ccgcacaggg
     1081 gaatggctca atttcagaga accacaaagg cttacctaaa ccgtgccacg ctatacttgt
     1141 agcttcgata ccgctacaaa ttgagccgta ggtgaattgc attttttacc tatcctatcg
     1201 aaatactcaa attcccaata cggacaacat tttcttcgtt ggcttctagg atttctctca
     1261 acttagcata ggttttgggg catcttattt gacattcctc ttcgttgtag agagcctcta
     1321 atgtgtgcca ttcttttgca agtgcagccc aaactttccc aagttcagcc attttttcaa
     1381 tcctatttcg caaaaaaggg actgtctcca acaacagaaa gcaacgcctg aaatccgata
     1441 catcgtgtgg gtagccttct atttttggtc ttattccgta accaaggtaa aaagccattg
     1501 ttttactgct tacccctgtc tctccattgg caagccacca agcgattttg tcttctatgt
     1561 gcatttttcc tccaaaaatt aaccgcttgc ggaacaagtt ctacaagcgg ttgtcaagtg
     1621 ttcatttgtt caatgaacag ttcattgtga ataacaaaac cgcttgaatt acaagcggtc
     1681 tattttgttg cgtaaattta ctgttagcgt tgagccataa ccgactacga ccgctggccc
     1741 gaagatattg acggcgaggg ggacggcttc tcgcttgcct ccaaacggac gaccactttt
     1801 atgtcagccg gaatgacttt agtggagagt tcgcctggta aagatattgt cgatctcaaa
     1861 catatcccga aaagtagcca cgaagcccca ccgactaccg gtattttaag cctctacaat
     1921 cgaggcgacc gcagacgctt tagcgaaaca gttgataggt aagctatgaa aatccatacc
     1981 caaatccgaa aagaaatcct ttcattatta gaggcaaaat taacggacat cgagcatttt
     2041 tataacgggc aaccgaattt cattgatatt gacgaacagc aacttgccat ctctgtttat
     2101 cttgatgaga ttaaccgtca ggagcttacc ttatgcgatg aacagtggac agctcaactt
     2161 aacatcacga tttatctaaa atcagttgat gaggcagaag atgaattaga tgagtgggcc
     2221 gaaaaaatcc gtgaagtggt tgaaacatat tctgcgtttg aacatttaga gggcatcagc
     2281 ctttctcaat atcaatacga acaagatcaa aatcaaagaa cttggcactc agccacattg
     2341 atttttgatg ttgaatacta acaagcaaat aatccttata ggagaatcta caatggcaaa
     2401 aacaacaaaa gtccaaggca caaaatttag aattggcatt ggacgtgaag cccaaaaggc
     2461 aattacggct atcactttag ctacagcaac gcttactatt gccacatcag gctataaaaa
     2521 aggcgatgca atcgaaatta ccggttgtgg tcagttagac ggcatttatc ctgtattatc
     2581 tgtaacaggc gatcaagtca aattgtgcga agaagtaaac tggacgggta aagatttacc
     2641 ggctaattac accaaagcca aagcagcttt agtacaatac tcagaccaat tctgtgcggt
     2701 aaaaaacatt gaaaaatctg atgatacgtt aagtaccgaa gatgttacaa cggtctgctc
     2761 ggaaggtaca gaaaccgaac ccggagaaat tgaatttggc tcaattaaac tgagcttttt
     2821 tcacaagcca agtacggaaa tgcaaactcg cttacgcaaa ttgttttatg acaaatccac
     2881 ctttgcgtac aaattagaat tacctgataa ccacggcaca acctatggcg aaggtttcat
     2941 tgaggcgggt aacggcttta gtggcgaagt taaaggcaaa tatgaaggct cggtatcaat
     3001 taaaccaagc aaacgtgatt atttgctagt gtaattacaa aatattgctc caaatcgacc
     3061 gcttgtaata ttgcaagcgg tcttttttat cctaaatttt acaaaaggaa tcgacaatga
     3121 cactccgtga aaaactcctc gccaacaaac caaaattaca atctatcgaa atcaacggtg
     3181 agacctacta cctgcgtgaa gccactgttg gcgatatgaa taagcagatt tttgaaaccc
     3241 gaagctggct cattcaacaa gctgaacaag aaaatgttga attaccggca gaagatgatg
     3301 aaacctttga cgaagctctc aaccgttttg gcgaaaaata ccgccttgct caatcggttg
     3361 cctaccgttt atgtgacgaa aacggtgcat tactgtttaa cccacttaac attgacgatc
     3421 tcaatgcgat tgccgaatta gacagtaaag tgattatcga ctttaaccaa gccgtgtccg
     3481 ccccaaaaga ctcagcgagc gaagaaagtt ccaaataacc ctttcgctcg cactgggtaa
     3541 aacccttgaa gaaatcgaac aaatgcctga acgccacttt gccgaatatc agctttttta
     3601 tcaagagcaa ccttttgggc tttggcgtga ggactatcgt gctgctcaac ttgcccactt
     3661 aaccgcaatg atcaaccgtg acccaaaagg caaagcccct gaactctcgg aatttatgcc
     3721 gttttttaat cgggctgatg aagtagaagc aaatgaagat gatggcgttg cggattattt
     3781 ggcgaaaagg taaatctctt gtatttcatt gtaattctgt ctataattgg tgtaatacat
     3841 agaaatacag gagagataaa atggcgacta tcaatgatgc tttcagtttt agaacaaata
     3901 ccgaaataaa aaataccgca tttgatgtaa ttaaaaacta tggaatgaca ccctctcagg
     3961 tgtttaatat gtttttaacc gagattgcaa aaacgaaaac tattccgtta agtttgaatt
     4021 atcaacccaa tcttgaaaca aaattggcaa tgcaagaagc aaaatcaggt aaaaatgaag
     4081 tttatgcctc acttgaagca tttcataaag caatgttagc ggagtaaata atgctacaaa
     4141 tttcgccgac aaacgcatat aaaagagact ttaaaaagat tgcagccgaa ttagtcggta
     4201 gttcggaata tgtggaagta atgtattgcc taataaacca attaccattg gcggaaaaat
     4261 atagagatca cccactacaa ggtgaatggc aaggctttag agattgccat attaagcctg
     4321 atttagtgtt gatttacgct gttgaagata atctgctccg ccttgttcgt ttaggatcgc
     4381 acgctgaatt atttggataa tttctgtaaa aactaaccgc ttgcgatttt gtgctgtggg
     4441 cggtatagtt ggaatattaa caaaggaggg aaaaatgaaa aatgtacttc tatttatcgt
     4501 acactttttc ttaatcgcaa tgctctcaat tatcccaata ttaattattc ttggagcaat
     4561 cgaaagagat ccttactata ctgcgtggat tttccttagc gtatttttag gcattggagc
     4621 attgttatat tttgcaacca ttgtttctaa gttaattaac aagggaaaaa cacaaacatt
     4681 agaagaaaaa cgatatgcag aatattggaa taatgtaaaa gtcaatattc ccaaatagtc
     4741 taactgataa atgaccaaaa gctcgcttta tgcgggcttt tttattggag aaaaacaatg
     4801 agtggcttag gaaaattaac cgttacctta gagcttgaaa atgcaaaatt tcagtccgca
     4861 atgacgaaat ctgattatga ggcacaaaaa tttgccaaga actttatcca aaatatggat
     4921 agagctagaa atcacgccaa agaatttgcc gatcgctcaa cccaatattt aaaaaacatt
     4981 gagcaagcgg caaagaacct caataaaaat tctgaatttt catttttatc gactattggt
     5041 ggacattatc aatcaatgtc tagtggcata ttgagtgcgg caaaagccta tactgatatt
     5101 caaaataaaa tgaaattagt aagcggtagt tcagcagagg cagctaaacg attaactgat
     5161 gtgtttgata ttgcgactaa aacaagccaa agtacagagg ctgtttcagg tgtctatcaa
     5221 acatttgctc aaaatgccca atctctcgga ctggctcaaa aagatgtagc agaattaact
     5281 aaaacggtct ctcaagccgt tgctgcaagc ggcgcaagca gttctgcagc aagtaatgcc
     5341 ctaacccaat ttggtcaatc acttttaatg ggcaaaatga aagcccaaga atttaactcg
     5401 ctcattactc aaaccccaac cattattcaa gcaatggcaa aaggtttggg aatgacaatg
     5461 gcagaattta aagcagcggt ataccgggca aaatctttac ttggataaca ttcaagggca
     5521 aggttttgag agagtggata caccccaaat cggcgatgtg attttaatac aggtcggttc
     5581 tgatgtgccg aatcacgcag cgatttatat tggtgaacaa atggtaatcc accatagccc
     5641 gaaccgatta tctaagcgtg atttatatga cggttattgg ttacgccata cccacagtat
     5701 ttggcggcat aaactggcgg atagattgga ttttgacggc atatttaatg atataggaga
     5761 acaatatgaa atttagtaaa tatcaattat tagttaataa gatctgcttt atttgtggta
     5821 aaaaagattg tccacaaatg aaaaagagta aagactacaa agactttttg gatgctttag
     5881 aaaaagggga tgttgataaa gcagataaaa tatacaatac gaagttttca cagttttcta
     5941 aatcttttgg tcatgaaatg gaaaagaatt tagagaaaaa tcgtatacct cctatttatc
     6001 agggagttcc atttgattct tttgacttat atcagcatta ttcttatggt aatggagagg
     6061 cattaaatct ttcatccgtt ggattaagta ataaaattcg tcctctagtg aataaagata
     6121 aagcatttgg taaatccaat ggaagtatag aaagccgatt tatttcgcaa tataaaaatg
     6181 aaggacgcac atctttctcc aatgcttatg attttacaaa agaagcatcg ggtattgcag
     6241 atccgttatg ggcgttagga acagctacca ttagtggaga attgaaagat atacaaattt
     6301 ttcccggtgg tattgctagg ggaaatatcc attatagtat cagggacaga ttcactgacc
     6361 catttgatac attcaatttt actaaaggag aatggaaccc aaatggaaca ccttatatta
     6421 ttcaagatag ctggataaaa tcggtacgat tttcgataga caagaagata aaaataacac
     6481 cttaattatg atagtaatat aaaacaattg gcaatattat tttaaataaa aaaataagta
     6541 ttccaatata gattgctgat tttatggtgt atttaatttg tttctcgaaa ataaaaaaat
     6601 aactagtaat tgcatataaa caaataagta ataatatgct tatagagtta agaaaaataa
     6661 agaacataaa tcccctttat tttggctata attgtaatgg tgagtcatga ctaaaattaa
     6721 attttacggc aatttaaaaa aatttggtag tgaatttagc ttagaagtta aagatactgc
     6781 cgaagctatc cgagccttat gtacacagat tagcggattg cgtgaggcat tacgagacgg
     6841 tgtttataaa gtccgtatcg gcaaacagta tttagacccg tcagcccttg aaaaagggct
     6901 tttttattgt ctgaagaaag ggcaaaccat tcattttacc cctgttatca aaggagcgaa
     6961 aagcggtggc gtgtttaatt ttgttttagg tgcagccttg atcggagccg cattttttac
     7021 tggcggtgct tctattgcgg cttggggagc tggagcaaaa atgatgggta tgttaggggc
     7081 ttcgatgtta ctaggaggag tttcccaaat gctcaccaaa atgccaaaag cccccacaat
     7141 gggtaatgaa acagaaaaag aaagctcaac ggctttttca aatttaaata acttggtgac
     7201 tcaaggcaaa cctgtgccgt tggcttatgg cttaattcgg accggctcgc ttgtgatatc
     7261 gcagggagtt gagacgatca ccattaaaga aaaccaaccg gcaagcaaca agaaaacagg
     7321 ctttagaaaa taagggataa ttaccgattc agcacaagca cagcaactta atcagttatc
     7381 tgtgaacttg accaaagcag agagcaattt aaatgccaaa atcacggaag aaaaaaaagc
     7441 tcgtgttgat gcagataaag tgaatgcaga taaactcaca gacataacaa gccgtgttgc
     7501 aaatgcggaa tcaactatta ccaatttcca atcaaccaaa gcgaataaaa gtgaggttgc
     7561 gagccttgca caaagttcgt tgcaggca
//
LOCUS       DANLZQ010000112         7556 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.112, whole genome shotgun sequence.
ACCESSION   DANLZQ010000112 DANLZQ010000000
VERSION     DANLZQ010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7556)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7556)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7556
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.112"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(14..673)
                     /locus_tag="PXE50_002204"
     CDS             complement(14..673)
                     /locus_tag="PXE50_002204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA family transcriptional regulator"
                     /protein_id="HDL5623068.1"
                     /translation="MTTLGSRIKAYREQLGISQYEVAERCTSIDNRDKNNKWGQSRIA
                     NYERNNRTPDLDDIEILSKVLGVSPETLAFDTNVQLARPTKSNSYPLISNIQAGLWTE
                     AFDFKDSEGYDYIDTEIDAGPDAFFLRISGMSMEPKFSEGDLVLIDIRKRPHPGDYVA
                     AVNGTGEATLKRYRELGEWSESGNPHFELIPLNPDFPTLSSMKQDIRIIGVAVEHRSY
                     L"
     gene            803..1009
                     /locus_tag="PXE50_002205"
     CDS             803..1009
                     /locus_tag="PXE50_002205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005656653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5623069.1"
                     /translation="MNKIAEIRNQIGISQAQLAVQIGWGQPRIANYETGNRTPSIYVA
                     QKIVEGLNELGANVRIDDVFPVGN"
     gene            1030..1290
                     /locus_tag="PXE50_002206"
     CDS             1030..1290
                     /locus_tag="PXE50_002206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623070.1"
                     /translation="MPRNELTKNARAIADLIHRKSATVTHKKLARAIGLSESQFSRTF
                     ADNVEMVAVIIDYLSIELADKDELLELKEKRYKRINLEEATT"
     gene            1454..1624
                     /locus_tag="PXE50_002207"
     CDS             1454..1624
                     /locus_tag="PXE50_002207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623071.1"
                     /translation="MKNQRNDTQKSSLWQEFEYRKRLKNLIESGLSVAEIETRSQQIY
                     EELKSECTTEAN"
     gene            1599..2468
                     /locus_tag="PXE50_002208"
     CDS             1599..2468
                     /locus_tag="PXE50_002208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication protein"
                     /protein_id="HDL5623072.1"
                     /translation="MNAQPKQINPILKLHPKQSEAKKVSVDDGYTQIPNELLKAILRS
                     GVLGWKGSYLLATVLKTLSWHKESDWFTHSQVCEMMNIEPTKYHINQLSAARKELIRE
                     NILFEDGKETGVNLSVFEWKMVYPEKVGSSRNNRELIPEKVGNGYPEKVGNTKETITK
                     EKINNEFTNVNSVQQPETSLPKKTKSEPVDYQGVMEEFNRAVEDTPIPQIRAMSDERK
                     RSVHALAKILRKEFGGYTRQHFADYFNDFVRQASSRKDRFYFGGLDGSAWVANFGYII
                     RSKTFYKTWEDSL"
     gene            2465..3826
                     /locus_tag="PXE50_002209"
     CDS             2465..3826
                     /locus_tag="PXE50_002209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase"
                     /protein_id="HDL5623073.1"
                     /translation="MSQNLKNITYEVEYLLVGALLKSGLNSKARDVLSWLEPEMFATF
                     QLGVIYEAIRKQALKDNVIDMLLLNTDYGQDFATLAEIMKNTISGANLDGYAEKVRQY
                     HQRREAQRVFLDVAGELQNARDEQLDAITSTGLAHLSKLLQRGGKVKPIDMNDLLEGY
                     LELFQERAKPSFKERLLFTGIEALDGKLGGINDTDICIVAGRAGNGKTETAITFTKNI
                     IENKGSVLFFSLEMSKEQIMDRLIASASGVNSVKLRNPEMMNDEDFARMGTAIQPLQN
                     QQLYIVDKSGLTAEEIVAIAESHIQEYGKVSAVVIDYIGLVRHGKLDGKINRTYQIGE
                     SMERFKTFCKNNHTPMILLAQLNRNADGSRPTNADLRDSGSLEQDASQIIMVHNQRNK
                     DGEPAPYTEWIVTKNRFGANGTVYMQFQQGRFVECDQAEAREYFQPKETKTSSNKRYG
                     AMQ"
     gene            3823..4359
                     /locus_tag="PXE50_002210"
     CDS             3823..4359
                     /locus_tag="PXE50_002210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HDL5623074.1"
                     /translation="MTDFDKNIKYKIIYADPPWKYKDSGCNGSAENHYTTMNIKEICD
                     LPVQDISDKDSILFLWVTYPMLPEGLKLIEAWGFNYKTIGFQWVKTNKKNKNSFFFGL
                     GRWTRGNTECCLIATKGKPSRVSNKVSQLIIEPIQHHSKKPDIVREKIVELMGDLPRI
                     ELFARNKTQGWDVWGDEV"
     gene            4450..4665
                     /locus_tag="PXE50_002211"
     CDS             4450..4665
                     /locus_tag="PXE50_002211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623075.1"
                     /translation="MITYKCPKCNGELEDLSINDEWGWFLDEPYRCNGHYTGRFPNIS
                     RDSTLNRTKSCGYFSKEEVKKVNGTQR"
     gene            4649..5155
                     /locus_tag="PXE50_002212"
     CDS             4649..5155
                     /locus_tag="PXE50_002212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1367 family protein"
                     /protein_id="HDL5623076.1"
                     /translation="MAHSVNDIVKAHGRRYKARLKIQMIKMQGGVLVPLNEREAEALV
                     SLKNGEQYEIEVIRTRNPAFHRKVFAFLNFCFEYWSADKTEWEFFDERKQFDTFRKNL
                     TVLAGFKEITYTLDGRMRVEAQSLSYGNMEQDEFEQVYKALINAAIKHVFNNTKDENR
                     INQLYSFF"
     gene            5205..5417
                     /locus_tag="PXE50_002213"
     CDS             5205..5417
                     /locus_tag="PXE50_002213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623077.1"
                     /translation="MKKNVIRYWLSVPFRIIAVLFFLVILTVRYVGYLLIYPLAFFAA
                     VGSFIVFCQWTYQEWLYYFKRGFAPI"
     gene            5463..5657
                     /locus_tag="PXE50_002214"
     CDS             5463..5657
                     /locus_tag="PXE50_002214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623078.1"
                     /translation="MTKFFETIAFVMLFGIIPSCLLAINTTLMNMNIKNAPWFMVIIQ
                     LGFNITCYWLWFISVMRNVI"
     gene            5785..6354
                     /locus_tag="PXE50_002215"
     CDS             5785..6354
                     /locus_tag="PXE50_002215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein NinG"
                     /protein_id="HDL5623079.1"
                     /translation="MANKPPKQHKCKECGSYYIKFQSTQQVCSVKCAMAMGKRKTEAK
                     RKKSAKIDRLEQRKRLEKLKSRRDFEKDLQKIFNKFIRLRDKDLPCISCGRYHQGKYD
                     AGHYKTVGGNPELRFNEDNCHSQCVPCNRHLHGNIVNYRVNLIEKIGLERVEFLERKD
                     HPPLKLTIEQIKDLIKVYKAKCKELERVT"
     gene            6344..6817
                     /locus_tag="PXE50_002216"
     CDS             6344..6817
                     /locus_tag="PXE50_002216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623080.1"
                     /translation="MLPRKIKNKWLEPEKQKWIEELLRLWGAWEFGGLDLESRVNMIY
                     RLMKSAEGVKSLSSREVCNDSLGTLINEIFTVVTKRDVMLADILKQKYWFGRSERQIA
                     IYYQLRDSEGRKERRWQEIIQDKCKKAERIIADILESKISSSNSTDKLKKYQFSP"
     gene            7045..7120
                     /locus_tag="PXE50_002217"
     tRNA            7045..7120
                     /locus_tag="PXE50_002217"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:7078..7080,aa:Trp,seq:cca)
     gene            7137..7322
                     /locus_tag="PXE50_002218"
     CDS             7137..7322
                     /locus_tag="PXE50_002218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623081.1"
                     /translation="MYNLDDAIQECREKFGEDKPYFSEAGTLTFAGCKALSRLRDEKL
                     GIKAPPNFPFPRVEDLS"
     gene            7348..7518
                     /locus_tag="PXE50_002219"
     CDS             7348..7518
                     /locus_tag="PXE50_002219"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623082.1"
                     /translation="MTEQLNTQSKSGEEDQEKSQDRYAVGWPSRRISDCVQHFRSRKI
                     YPFASNNDVKQG"
BASE COUNT         2463 a         1274 c         1715 g         2104 t
ORIGIN      
        1 gctttggtgg actttacaaa tagcttctat gctcaacagc gacaccaata atacgaatat
       61 cttgtttcat tgagctgagt gttggaaagt cggggttaag cggtattagc tcaaaatgag
      121 gattgccgga ttcagaccat tcgcctaact cccgataacg ttttaaagta gcctcacctg
      181 tgccattaac cgctgctaca taatcgcccg ggtgaggacg tttgcgaata tcgattaaca
      241 ccagatcgcc ttcactaaat ttaggctcca tcgacattcc ggaaattctt aaaaagaaag
      301 cgtccggtcc ggcatcaatt tccgtatcga tatagtcgta gccctccgaa tctttgaaat
      361 caaaggcttc tgtccataaa cccgcttgta tattgctgat caacggatat gagttcgatt
      421 ttgtcggtct ggcaagctga acgtttgtat caaaagcaag tgtttctgga gaaacaccaa
      481 gcactttgct gagtatttca atatcatcaa gatcgggagt acgattgttt ctctcataat
      541 tagcaatgcg agattgcccc catttgttat ttttatctcg attatctatt gatgtacatc
      601 tttcagcaac ttcatattgg ctgattccta gctgttctct gtaagcctta attctactac
      661 ctaaggttgt catagcactc tcctattaga ttttcctcat tttaacacgc tccgttatat
      721 ccttgtgaat cacaaaatga aatttacaat tagttcattt tgtgatttaa ttaaaagata
      781 taaatcacaa agagaaattt gtatgaataa gatagctgaa atacgaaacc aaattggtat
      841 aagtcaagct cagttagctg ttcagattgg ttgggggcaa ccaagaatag ctaactatga
      901 aactggaaat cgtaccccat ctatttacgt tgctcaaaaa attgttgagg gattgaacga
      961 attaggtgca aacgtacgaa ttgatgacgt tttccccgtt ggcaactaat ttaccccaag
     1021 aggcttgcaa tgccacgcaa tgaattaaca aaaaatgcaa gagcgattgc ggatttgatt
     1081 catcgaaaat ccgcaacggt gacgcataag aaactagcaa gagcaatcgg actgagtgaa
     1141 tcacaattta gccgtacatt tgcagataat gtggaaatgg tggcggtgat tattgattac
     1201 ttaagtattg agcttgcgga taaagacgag ttactagagc tgaaagagaa acgatataag
     1261 cgaataaatc tcgaagaagc gacaacatag aagttaccaa caatgaaaaa ttttttagaa
     1321 aaattcaaat cattctacca cagtaaaaat tcaattttta ttagagtggc aatttttatg
     1381 ctgcttgcgt ggtgggtttt taacaattaa aaaaccaccg ctggaacggt ggtaatttac
     1441 aaggagttac cttttgaaaa atcaacgcaa tgatacacaa aaaagctcct tatggcaaga
     1501 gtttgaatat cgaaaacggt taaaaaatct cattgaaagc ggtttatccg tagccgaaat
     1561 tgaaacccgt tcacaacaaa tttatgagga gctgaaaagt gaatgcacaa ccgaagcaaa
     1621 ttaacccaat tttaaaattg caccctaaac aatcagaggc taagaaagtg agtgttgatg
     1681 atggttatac acaaattccg aatgagttat taaaagcaat tttgcgatcg ggtgttttag
     1741 gttggaaagg ctcttactta ctggctaccg tcttaaaaac attgtcttgg cataaagaaa
     1801 gtgattggtt cacgcattcc caagtgtgtg aaatgatgaa tattgagccg acaaaatacc
     1861 atattaatca actttccgct gctcgaaaag aacttatccg tgaaaatatc ttgtttgaag
     1921 atggtaagga aacaggggta aatctcagtg tttttgaatg gaaaatggta tatcccgaaa
     1981 aagtagggag ttcccgaaat aatagggaat taattcccga aaaagtaggg aatgggtatc
     2041 ccgaaaaagt agggaacaca aaagaaacta ttacaaaaga aaaaataaat aatgaattta
     2101 ctaacgtaaa ttctgtgcaa cagcccgaga cctctttgcc gaaaaaaaca aaatctgagc
     2161 cggtcgatta tcaaggagtg atggaagaat ttaatcgtgc tgtggaagac acaccgattc
     2221 cgcaaattcg ggcgatgagt gatgagcgaa agcgatcggt tcacgcatta gcaaaaatct
     2281 tgcgaaaaga atttggtggc tacaccagac aacactttgc cgattacttc aatgattttg
     2341 tccgacaggc aagtagccgg aaagacagat tttattttgg cgggcttgat ggctcggctt
     2401 gggtagcaaa tttcggctac atcattcgtt cgaaaacgtt ttataagact tgggaagatt
     2461 cgctatgagc caaaatttga aaaatatcac ttacgaggtt gaatatttgc tggttggagc
     2521 attgctgaaa tccggtctta actcgaaagc tagggacgta ttgagctggt tagagcctga
     2581 aatgttcgct acctttcaac ttggggtgat ttatgaggct atccgcaagc aggcgttgaa
     2641 agataacgtg atcgatatgc tgttactcaa taccgactac ggacaagatt ttgccacgtt
     2701 ggcagagata atgaaaaaca cgatcagcgg tgcaaactta gacggctatg cagaaaaagt
     2761 ccggcaatat catcaacgcc gagaagccca gcgagtgttt ttagacgttg caggtgagtt
     2821 gcaaaatgcc cgagacgagc agttagatgc tatcacttca accgggttag ctcacctaag
     2881 caaattatta caacgtggcg gaaaagtgaa accgattgat atgaatgatt tgctcgaagg
     2941 ttatttggaa ttgttccaag aacgtgcaaa accaagtttt aaagagcgtt tgttgtttac
     3001 cggtatagaa gcattagatg ggaaactagg cggtattaac gataccgata tttgcattgt
     3061 agcaggacgt gccggtaacg gtaaaaccga aacagccatc acgtttacta aaaacattat
     3121 cgagaataaa ggttcggtgc tgttcttctc gctggagatg agcaaagagc agattatgga
     3181 taggctgatt gccagtgcaa gcggtgtaaa ttcagtaaaa cttcgcaatc cggaaatgat
     3241 gaatgatgaa gattttgccc gaatgggaac ggcgattcag cctttacaaa atcagcagtt
     3301 gtacattgtt gataaaagcg gattaaccgc agaagagatt gtggcgattg cagagagcca
     3361 tattcaagag tacggcaaag tgagtgcggt agtgattgat tatatcggtt tggttcgaca
     3421 cggcaaacta gacggcaaaa ttaaccgaac ctatcaaatc ggtgaaagta tggagcggtt
     3481 taaaactttc tgcaaaaaca atcacacacc gatgatttta ttggcacagc ttaaccgcaa
     3541 tgcagatggc agtcgcccaa ccaacgcaga tttgcgagac agtggcagtc ttgaacaaga
     3601 tgcaagccaa atcattatgg tgcataacca acgcaacaaa gacggcgagc cagcccccta
     3661 tacagaatgg attgttacta aaaatcgctt tggagcaaat ggcacggttt atatgcaatt
     3721 ccagcagggt aggttcgtag aatgcgacca ggcagaagcg cgggagtatt tccagccgaa
     3781 agaaactaaa acatcatcaa acaaacgcta tggagcaatg caatgacaga ttttgataaa
     3841 aatataaaat acaaaattat ttacgcagat ccgccttgga agtataagga tagtggctgt
     3901 aatgggagtg cagaaaacca ttacacaaca atgaatatca aagaaatatg tgatttaccc
     3961 gtccaagata tttcagacaa agattctatt ctgtttttgt gggttactta ccctatgtta
     4021 cctgagggct taaagttgat tgaggcgtgg gggttcaact ataaaacaat agggtttcaa
     4081 tgggtgaaga caaataagaa gaataagaat tcttttttct ttggcttggg acgatggact
     4141 agaggtaata ccgaatgctg tttaattgca acaaaaggaa agccatcgag ggtaagcaat
     4201 aaagtgagcc aattaattat tgagccaata caacatcata gtaaaaagcc tgacattgtc
     4261 agagaaaaga tagttgagtt gatgggtgac ttgccaagaa tagagttgtt cgccagaaat
     4321 aaaacccaag gttgggatgt ttggggggat gaggtgtgat tgtttcaagc tattgttacc
     4381 caaagtgcgg tagggtttta ttaaaaaggt tggcggttgt gaaggataac gaaggttggg
     4441 acggtttaga tgattactta taaatgcccc aaatgcaacg gagagcttga agatttaagt
     4501 attaatgatg aatggggttg gtttttagat gagccgtatc gttgcaacgg acactataca
     4561 gggcggtttc caaacattag ccgagatagc acgttaaatc gcacaaaatc ctgtgggtac
     4621 tttagcaagg aagaggttaa gaaagtaaat ggcacacagc gttaatgaca tcgtaaaagc
     4681 ccacggcagg cgttataaag caagattgaa aatacagatg ataaaaatgc aaggaggcgt
     4741 tttagtcccc cttaatgagc gtgaagctga agcattggta tcacttaaaa atggcgagca
     4801 atatgaaatt gaggttattc gcactcgcaa tccagccttt catcggaagg tcttcgcctt
     4861 tttaaatttt tgctttgaat attggtcggc agacaaaacc gaatgggagt tttttgatga
     4921 gaggaaacag tttgatactt tccgaaaaaa tctgactgtt ctggcaggat ttaaagaaat
     4981 cacatacacc ctagatgggc gtatgcgtgt agaagctcaa agtcttagtt acggaaatat
     5041 ggaacaagac gagttcgagc aggtttacaa agcattgatt aatgcagcta tcaagcacgt
     5101 tttcaacaat accaaagatg agaataggat aaatcagttg tattcgtttt tttaattaag
     5161 gcgaaatcgc catatttaat taggtttaat tgcaggagat taaaatgaaa aagaatgtta
     5221 ttagatattg gcttagcgtg ccattcagaa ttattgcagt gctttttttc ttagtcattc
     5281 ttactgttag atatgtaggt tatttattga tttatccatt agcattcttt gcagcagtcg
     5341 gtagttttat tgttttctgt caatggacat atcaagaatg gctttattat tttaagcgcg
     5401 gttttgctcc gatttagtgt gtgtttatta attccctcga attcggggga aggagaagta
     5461 agatgacaaa attttttgaa actatcgcat tcgtgatgtt atttggcatt attccaagct
     5521 gtttgttggc gattaatact actttaatga atatgaatat taaaaacgca ccgtggttta
     5581 tggtgattat tcagttaggt tttaatatca cttgttattg gttgtggttt atttctgtta
     5641 tgcggaatgt tatttaagga gattaataag tgagccagtg caatgaactg actgtaattt
     5701 taatcgccat cgctattctt agtgtatgtg ccggttcact cttttttatt gagtggtttg
     5761 ataagagaga tggtgagggt tggaatggct aacaaaccac ctaaacaaca caaatgcaaa
     5821 gagtgcggca gttattacat caaatttcaa agcacgcagc aggtctgctc tgttaagtgt
     5881 gctatggcaa tgggtaagcg taagacagag gcgaaacgca aaaaaagtgc aaaaatcgac
     5941 cgcttggagc aacggaagcg gctggaaaaa ttgaaaagcc gtagagattt tgagaaagat
     6001 ttacaaaaga tatttaataa attcattcgc ttgcgtgata aagatttacc ctgtatttcc
     6061 tgtggccgct atcatcaggg gaaatatgat gcagggcatt ataaaaccgt tggtggtaat
     6121 cctgagctac gttttaatga agataattgc cacagtcaat gtgtgccgtg taaccgacat
     6181 ctgcacggca atattgtgaa ttatcgagta aatctgattg agaaaatcgg gcttgagcgt
     6241 gtggaatttt tagagcgtaa agaccaccca ccattaaaac ttactatcga acaaatcaaa
     6301 gatttaatca aagtctataa agcgaagtgc aaggagcttg agcgtgttac ctagaaaaat
     6361 taaaaacaag tggttagagc ctgaaaagca gaaatggatc gaagagttgc taaggttatg
     6421 gggggcgtgg gaatttggcg gattggattt agaaagtcgg gtaaatatga tttaccggct
     6481 gatgaaatct gcggaggggg ttaaaagtct ttcatctaga gaggtttgta acgatagcct
     6541 cggcacgctg atcaatgaga tttttacggt agtcaccaaa agagacgtaa tgttagccga
     6601 tatactcaaa caaaaatact ggttcgggcg ttcggagcgg caaatcgcta tttattatca
     6661 actaagggac agcgagggta gaaaagaaag acgatggcaa gaaattattc aagataaatg
     6721 caaaaaagcg gaaagaatta ttgcagatat tcttgaaagc aagatttcat ccagtaattc
     6781 tacagataaa ctgaaaaaat atcaattttc cccttgattt tagtgcgtaa caagtgtata
     6841 ttttgtgcta atggtggacg tagtataaat gatgtttacc aatgttagtt aaagacgcag
     6901 cctgaagtaa tattcagttc ggaggagaat aactagaaac gacgtcgagt atagttattt
     6961 cagcgtttgc gtggcagtat gccgaccgaa ttagtttaac agccctgagc agaaatgctt
     7021 ggggcttttt tgtttacgga ttttaagggt gtagctcagt tggtagagca gcggtctcca
     7081 aaatcgttgg ttgttggttt gagtccaacc accctttcca aatgcgagta aatgttatgt
     7141 ataaccttga tgatgcaatt caagaatgca gagaaaaatt tggtgaagat aagccttatt
     7201 tttctgaagc tggaacactt acttttgctg gttgcaaagc cctctctcga ttaagagatg
     7261 aaaagttagg aattaaggct ccgccaaatt tccctttccc aagggttgaa gatctatctt
     7321 agctacaaaa atcaatgagg gattgctatg acggaacaac taaatactca gtcaaaaagc
     7381 ggtgaagaag atcaagaaaa atctcaagat cgctatgccg tgggctggcc atctcgacgt
     7441 atatcagatt gcgttcagca cttccgaagt aggaaaattt atccatttgc cagtaataat
     7501 gacgtgaagc aaggttaaat gcttctggtg gtacagagta aattcaatca ttttta
//
LOCUS       DANLZQ010000113         7530 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.113, whole genome shotgun sequence.
ACCESSION   DANLZQ010000113 DANLZQ010000000
VERSION     DANLZQ010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7530)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7530)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7530
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.113"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..1995
                     /locus_tag="PXE50_002220"
     CDS             <1..1995
                     /locus_tag="PXE50_002220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDL5623083.1"
                     /translation="EIEQTRAAYDRLKRSGVASQNELRRASEATKQRVRELNAELGKT
                     SFGDKAGSFGRGLMGAGVGIAAGAAMARQPARNQMEFDRQLAMVANTAFSDRDVKGRI
                     DGKRELLDAVQKAVSVGGGSKEEALSSLDALLASGAVSTETALNLLPTLQKGAVATGA
                     SANDMAQIAISSMQQFGIKEEDIGRVLDMAVAAGQAGSFELADMASWLPQQMAAAKQA
                     GLSGIEGFERLLIANQQARVTAGTSNEAGNNLVNLLGKITAKETNERFKNIEYKDPKT
                     GKTKAIDFAKSMEHYKGKGQDSLQAFMSIMDDVVGSDKRYQELQAKLKTAKGEEQKRL
                     FNELTNLVEGTAIGEIISDRQALMALLGIKNNVQLGEKVQKDIQNSEGAVETSHAVIR
                     DTNAHKVESLKNTTEFAQMKNFEKVNGVLGTLAELLNKYANEYPNLTQFLSGATDAVK
                     IFGAALAASSVLDLLTGKKDKGGLIGDVLDKSSKASGGKGKVGKLLSVGGSFASVAGV
                     ATMLHGDQAPMSEERKAELRDPNYQARKMYEYKKEILGSRFHSFFRSNETLEQYRKDV
                     SAYEAKQKNSNTMGAVQGVLSTIPSLQELRPKVDSVTQTLSTYQADFQAFGATISAGI
                     EAGLASQSHTIANQITVELDGSVVAEKVAEYQFNFNKRMA"
     gene            1995..3287
                     /locus_tag="PXE50_002221"
     CDS             1995..3287
                     /locus_tag="PXE50_002221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA circularization protein"
                     /protein_id="HDL5623084.1"
                     /translation="MSGWTMPIQQASFKGVRFDVLAVDDSFERAVVEHAYPFVNGADL
                     EDMGLNTQTIRLQAVFFGSSYYTDYIRLLSVLQQKGADVLVHPIRGRLPNMLLVSANL
                     HTDAENINYVALDLTFKEATEMQPIFAFEDSLISKIDKLLLDLENLFDDGLRFWDSVG
                     VFDLKSRLLGLWGALFASFEAVRNLFDLDKKKYSIASSTSQRTYLRDGSGALNQLKEM
                     VDSGIQGRADLTTLSFKSQLLNITDAIDNTQAIVSKVARDEGFNRSKTVKLLGSDVVE
                     LGIMLDLIATTKLTKVLTELVEEREEELLIGDLELINQIVREHWLNIINKLREQQKNT
                     QKGVPSDKTKVIYETAEKLINNIRNVAHQFTALVLAVINKKPPLTVRMVMDSGTIHKV
                     AHAFYGDYERADELLRLNPHIRQPNFIERGTLLNCYWE"
     gene            3290..4417
                     /locus_tag="PXE50_002222"
     CDS             3290..4417
                     /locus_tag="PXE50_002222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5623085.1"
                     /translation="MENEIVVEIDGSQHKNWKSYDIDSDFLIPADSFNFELGKSSNIE
                     VLPNYSGKTAIVKINGKTVLTGIVDTTHHTISKSGRGFSLNGRDKAAILVDCSAPITN
                     VQGLSLLDAVKKIVTPLGIKEVQLKAEKNPTLSKVDIDVGESAWEAIMRCANSAGLHC
                     WFDPKGVLIVGGADYAQPPVATLYCVKESGDSRKNNFVDATLSYDVSQSYSEVTFLAQ
                     KHGKDSDNAKHDFKWVYKNEEMELYKPKTIVLGDVENLEALMKQAKKQVSDWQLESFN
                     LTIIVPDHKTKDGTLWQAGQRVHVVCEEYDLDGIFFLMGRRFRLSRTGGTTTELRLKL
                     DGVWTPDAYQAKAQEARKRKGKKGRKKKEPVEYVGSWELGK"
     gene            4419..5081
                     /locus_tag="PXE50_002223"
     CDS             4419..5081
                     /locus_tag="PXE50_002223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HDL5623086.1"
                     /translation="MMRKLAKQTKEVAKGVQDSVRAAFRGVLNLVKSGSDIQQVQVSA
                     LADETIQDLELMQHFGFTSVPPAGTQAVVIPLGGKTTHGIIVATENGSFRVKNLKNGE
                     TAIYDSSGSTIILKNGRVIDIECDSFNIKCKQYSVTASGGANFNTPKLETDQQFVSQG
                     QISGNGGMVVQGGSGASFTGSLTQQGGSISTDGDVVASGKSLVTHQHNEQGDGRPTSA
                     PI"
     gene            5200..5550
                     /locus_tag="PXE50_002224"
     CDS             5200..5550
                     /locus_tag="PXE50_002224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015702386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage GP46 family protein"
                     /protein_id="HDL5623087.1"
                     /translation="MDREISPLTRDYTSENITTLQNAVYIRLTTPKGSWWADGRVGSL
                     LHLIQREKDLSRVGLLAQQYAEEALQPIIDDGRAKSITVTHEQPKDGSLNLLISVIDN
                     RGVKFEFKHPVKLV"
     gene            5563..6624
                     /locus_tag="PXE50_002225"
     CDS             5563..6624
                     /locus_tag="PXE50_002225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HDL5623088.1"
                     /translation="MYQIPTLEDVRREILRDIQSLEPTADIEVDSDYFVRASALASCV
                     VGLYAHQNWIVRQYFPDTADSEYLEMHAKLRNLYRKNATYASGSLKVFGTAGSVINEG
                     LQVKFGERFYVTKSSDVIGDDGSATVRVISMATGASSNVKSESKAQLTAAPAGVSSDC
                     LLLPDVTGGTEVESDAALLARLLEQIRRPPSGGNKNDFRQWAESVDGVTSAFVYPLRR
                     GEGTVDIAITSGDTVPSDEIVRATQAYIDEVRPVTAKSVYVLKPVEKRVNFNIKVQLD
                     TDTTLDGVKAEIENALENYFLSLKPADTLIISQIEAVISDLVGVVDREIVQPTRNQTI
                     DAYREMGWFRLGDVTVELM"
     gene            6624..7214
                     /locus_tag="PXE50_002226"
     CDS             6624..7214
                     /locus_tag="PXE50_002226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2313 domain-containing protein"
                     /protein_id="HDL5623089.1"
                     /translation="MVTINSKHGKALGGLLPPVSYDPNGRWLALSLEVEGRELDRIDA
                     RAKTLIDAVDVSTGIFIDDWERVCGLTANSSLPLETRIERVIAKLNQLGGLSIGYITQ
                     VAKELGYCIKISEPQPFIAGLSRAGDMLWHKDIMWTFFVDICNPTDDYKRFRASVSMA
                     GDALMGRYKDPILESLLEEVKPAFSRVWVRYLGDIE"
     gene            7211..>7530
                     /locus_tag="PXE50_002227"
     CDS             7211..>7530
                     /locus_tag="PXE50_002227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015483985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5623090.1"
                     /translation="MKQVMNPINTPTQRFKDGNPATGEYGTIVTAEFLNNVQDSVINT
                     QQELHSVLAEAGIEANDEQVNQVAKAIKKIAGDATRDNFNALANPDGYKHIGRCKSVA
                     ELRT"
BASE COUNT         2220 a         1395 c         1905 g         2010 t
ORIGIN      
        1 gaaattgaac aaactcgtgc agcctatgac cgcttaaaac gctcaggtgt tgcctcgcaa
       61 aatgagctac gccgtgcctc agaagcgact aagcaacgag tccgagagtt aaatgctgaa
      121 ttgggtaaaa ccagttttgg ggataaggca ggaagttttg ggcgtgggtt gatgggtgca
      181 ggggttggaa ttgctgcagg tgcagcaatg gctcgccagc ctgcaagaaa tcaaatggaa
      241 tttgatagac agcttgcaat ggtagcgaat accgcctttt cagatcgtga tgtgaaaggg
      301 cgtattgatg ggaaaagaga gttacttgat gccgtacaga aagcagtaag tgtaggcggt
      361 ggctcaaaag aagaagcgtt gagctcacta gacgctttac ttgcctcagg tgctgtttct
      421 accgaaaccg ctctcaattt actcccaacg ttgcagaaag gtgcggtcgc aacaggggca
      481 agtgcaaatg atatggctca aattgctatt tcctcaatgc aacaatttgg gattaaagaa
      541 gaggatattg gtcgagtctt agatatggca gttgccgctg ggcaagccgg tagctttgag
      601 cttgcagata tggcaagttg gttgcctcaa caaatggccg ctgcaaaaca agctggctta
      661 agcggcattg agggatttga gcgactttta attgcaaacc aacaggctcg tgtcactgcc
      721 ggtacaagta acgaggctgg taataattta gtgaatctgt tgggtaagat tactgctaaa
      781 gaaactaatg agcgttttaa gaatattgaa tataaagatc cgaaaactgg caaaaccaaa
      841 gcgattgatt ttgcaaaatc tatggagcat tacaagggaa aagggcaaga ttcattgcag
      901 gcttttatgt ctattatgga tgacgttgtc gggagtgata aacgctatca agaactacaa
      961 gctaaactta aaactgctaa aggcgaagag cagaaacgct tattcaatga attaacaaac
     1021 ttagttgaag gtacggcaat tggagaaatt atttctgatc gccaagcatt aatggctcta
     1081 ttagggataa agaataatgt tcaattaggt gaaaaagtac agaaagatat tcagaatagt
     1141 gaaggagctg ttgaaacctc tcacgctgtt attcgggata ctaatgctca taaagttgaa
     1201 tcattaaaaa atacaactga atttgcacaa atgaaaaact ttgaaaaagt aaatggagtg
     1261 ttaggcacat tagctgaatt actgaataaa tacgccaatg aataccctaa cttaactcaa
     1321 tttttaagtg gtgcaacaga tgccgttaaa atttttggag cagctcttgc tgcatcaagt
     1381 gtgcttgatt tattaaccgg taaaaaagac aagggcggac taattggtga tgttttggat
     1441 aaatcatcaa aagctagtgg aggtaaaggt aaggtaggta aattgctttc ggttggtggc
     1501 tcttttgcta gtgttgcagg cgttgccaca atgctacacg gcgaccaagc cccgatgagt
     1561 gaggagcgaa aagcagagtt aagagatcct aattatcaag ctcgtaaaat gtacgagtac
     1621 aaaaaagaga ttttaggtag ccgtttccac tcgttttttc gtagtaatga aacccttgag
     1681 caatatcgga aagatgtgag tgcttatgag gctaagcaaa agaatagcaa tactatggga
     1741 gctgtacaag gggttttaag taccattccg agcttacaag agttacgccc taaagttgat
     1801 tcggttactc aaaccctatc cacctatcaa gccgactttc aggcttttgg ggcaacgatt
     1861 tcagccggta ttgaggcagg gcttgcctcg caatctcata cgattgcaaa tcaaatcacc
     1921 gtggagctgg acggttcggt ggtggctgaa aaagtggctg aatatcagtt taattttaac
     1981 aagaggatgg cgtaatgagc ggttggacaa tgcctattca acaggcgagt tttaaaggtg
     2041 tgcgttttga cgtgcttgca gtggatgata gctttgagcg agcggtagtt gaacacgcct
     2101 acccttttgt aaatggggct gatttagagg atatggggct aaacacccaa actattcggc
     2161 tgcaagcggt cttttttggc tcaagctatt acacggacta tatccgctta ctttcagttt
     2221 tgcagcaaaa aggggctgat gtattagtcc accctattcg tgggcgttta ccgaatatgt
     2281 tactcgtttc ggcgaatcta cataccgatg ccgaaaatat caattatgtt gccttagatt
     2341 tgacctttaa agaggcaacc gaaatgcagc cgatttttgc ctttgaagat tcgctgattt
     2401 cgaaaatcga caagctgcta cttgatctcg aaaacctgtt tgatgatggc ttgcgttttt
     2461 gggatagcgt tggggtgttt gatctgaaat ctcgtttgct tgggctttgg ggggcgttgt
     2521 ttgcctcgtt tgaggcggtg cgtaacctgt ttgacttgga caagaaaaaa tacagcattg
     2581 cctcatcaac ctcacaacgc acctatttaa gagacggttc gggggcattg aatcagttaa
     2641 aagaaatggt ggatagcggt attcaggggc gtgctgattt aacgacactc tcgtttaaat
     2701 ctcagttact caatattact gatgcgatag ataacactca ggcgattgtg agcaaagtgg
     2761 ctagagatga gggttttaac cgctcaaaaa cggttaagtt acttggctct gatgtggttg
     2821 agcttggcat tatgcttgac cttattgcca cgactaagct caccaaagtc ttgactgagc
     2881 tggtagaaga gcgtgaggaa gagctgctaa ttggtgattt agagttaatt aaccaaattg
     2941 tgcgtgagca ttggctgaat attatcaaca aactgcgtga gcaacagaag aacactcaaa
     3001 aaggcgtgcc gagtgataag acaaaagtta tctacgagac cgcagaaaag ctgatcaaca
     3061 atatccgtaa tgttgcccat cagtttactg cacttgtgct tgcggtaatt aataaaaaac
     3121 cgcctttgac cgtgcgaatg gtaatggata gcggcacaat ccataaagta gctcacgcct
     3181 tttatgggga ttatgagcga gcggatgagc tattacgtct taatccgcat attcgccagc
     3241 caaactttat tgagcgaggc acgctgttaa attgttattg ggagtaaaaa tggaaaatga
     3301 aattgtggtg gagattgacg gctcgcagca taaaaactgg aaaagttatg atattgacag
     3361 cgatttttta attcctgctg atagttttaa ttttgagttg ggtaaatcta gcaatataga
     3421 ggttttacct aattattcgg gcaaaacggc aatagttaaa atcaatggca aaacggtgct
     3481 cactggcatt gtggatacca cacatcacac cattagcaaa agcgggcgtg ggtttagcct
     3541 aaatggacgt gataaagccg ctattttggt ggattgctct gccccgatta ccaatgtgca
     3601 agggctctct ttgcttgatg ctgttaaaaa aattgtaacc cctcttggga ttaaagaggt
     3661 gcaactgaaa gccgagaaaa acccgacttt aagcaaggtg gatattgatg tgggtgaatc
     3721 ggcgtgggag gcgattatgc ggtgtgccaa ctcggcaggt ttgcattgtt ggtttgaccc
     3781 caaaggcgtg ttaattgtcg gcggtgcgga ttacgctcaa ccgcccgttg ccacgttata
     3841 ttgcgtgaaa gagtcggggg atagccgtaa aaataacttt gttgatgcaa cactttctta
     3901 tgatgtgtcg caaagctatt cggaggtcac ttttcttgct caaaaacacg gcaaagattc
     3961 tgataatgcc aagcacgatt ttaaatgggt gtataaaaat gaggaaatgg agctttataa
     4021 accgaaaact atcgtgctgg gcgatgtgga gaacctcgaa gccttgatga aacaggcgaa
     4081 aaaacaggta tcagattggc agttggagtc atttaacctc acgattattg tacctgacca
     4141 taaaaccaaa gacggcacgt tgtggcaagc tgggcaacgt gtgcacgtgg tatgtgagga
     4201 gtatgattta gatggtattt tctttttaat ggggcgacgt tttcgactct ctcgcacggg
     4261 tggcacaacc accgaattgc ggttaaaact ggatggcgtg tggacacctg atgcttatca
     4321 agctaaagca caagaggctc gcaagcgtaa aggcaaaaaa ggacgtaaga aaaaagagcc
     4381 tgtagaatat gtaggctcgt gggagttggg aaaataatat gatgagaaaa ttagcaaaac
     4441 agactaaaga ggtggcaaaa ggtgtgcaag atagcgtgcg tgctgctttt agaggggtat
     4501 taaatttagt caagagtggc agtgatattc agcaggtaca ggtgtccgct ttagcggacg
     4561 aaactatcca agatttagag ctaatgcagc attttggttt cacttccgtg ccacctgccg
     4621 gcacgcaagc ggttgttatc cccttaggtg gtaaaaccac gcacggtatt attgtggcga
     4681 ctgaaaacgg ctcgtttagg gttaaaaatc taaaaaatgg tgagacggct atttatgatt
     4741 caagcggctc aactatcata ttaaaaaacg ggcgagtgat tgatattgag tgcgatagct
     4801 ttaacattaa atgcaagcaa tattccgtca ccgcaagcgg tggagcaaat tttaacaccc
     4861 cgaaactaga aaccgaccag cagtttgtgt ctcaagggca gatcagcggc aacggtggaa
     4921 tggtagttca aggcggaagt ggtgcaagtt tcactggctc attaacacaa caaggaggca
     4981 gtatctcaac tgatggtgat gtggtggcat cgggtaaatc actggttaca catcaacaca
     5041 acgaacaagg cgatggcaga cctacctctg ctccaattta acttacaagc taatttacaa
     5101 gcggtctaat tttgcaaatt ttttgtagaa aaagaccgct tgccatttgt ggaagtctct
     5161 ccccgttact cctgtcttta atgtctctac catagcaata tggacagaga aatcagcccg
     5221 ctcactcggg actatacaag tgaaaatata actacactgc aaaatgccgt gtatatcaga
     5281 ctaactactc cgaaaggctc gtggtgggca gatgggcgtg taggttctct gctccatctt
     5341 attcaacgtg agaaagattt aagccgtgtg gggctattag ctcaacagta cgccgaagag
     5401 gctttgcagc cgattattga tgacggacga gccaaaagca ttacggtgac acacgagcag
     5461 ccaaaagacg gctcgttaaa tcttttaatc tccgttattg ataatcgtgg ggttaaattt
     5521 gagtttaaac accctgtaaa actggtttag gtggttttta aaatgtatca aatcccaacg
     5581 cttgaagatg ttagaagaga aattctgcga gatattcaat ctttagagcc aactgctgat
     5641 attgaggtgg attcggatta ttttgttcgt gcctccgctt tggcaagctg tgtggtgggg
     5701 ctgtatgctc accaaaactg gattgttcgt cagtatttcc cagatacggc agactccgaa
     5761 tacctcgaaa tgcacgctaa attgcgaaat ctttaccgta aaaatgcgac ctatgcgagt
     5821 ggttcgttga aagtttttgg tactgctggc tcagtaatca atgagggctt gcaagttaaa
     5881 tttggcgagc gtttttatgt aaccaaaagc tcggacgtta ttggtgatga tggctctgca
     5941 acggtgcgag tgatttcaat ggcaacaggg gcatcaagca atgttaaatc tgaaagtaaa
     6001 gcacaactga ctgctgctcc tgctggcgta tcaagcgatt gcttgttatt gcctgatgtg
     6061 acaggcggga cggaagtgga aagcgatgcg gcattgctgg ctcggttatt agagcagatt
     6121 cgccgaccac cgtcaggcgg gaataaaaat gacttccgcc aatgggcaga aagcgttgat
     6181 ggcgtaacct ctgcgtttgt ttatccatta cggcgtggcg agggtacggt agatattgca
     6241 atcacctcag gtgataccgt gccaagtgat gaaatcgtgc gagcaactca agcttatatt
     6301 gatgaagtcc gccctgttac ggctaaatcg gtttatgtac ttaagccagt tgaaaaacgg
     6361 gtcaatttta acatcaaagt gcaacttgat acggatacga cgcttgatgg tgtaaaagcg
     6421 gaaatcgaaa acgctttaga gaattatttt ttatcactca aacctgctga caccttaatt
     6481 atttcgcaaa ttgaggcagt aattagtgat ttagtgggcg tagtagatcg tgagattgta
     6541 cagccaacca gaaaccaaac gattgatgcc taccgtgaaa tgggctggtt cagattgggt
     6601 gatgtaactg tggagttgat gtgatggtaa cgattaactc taaacacggc aaggcattgg
     6661 gcggtttatt accgcctgta tcgtatgacc caaacggcag atggctagcg ttatcccttg
     6721 aagttgaggg gagagagcta gaccgcattg atgcgagagc caagacttta atcgatgccg
     6781 ttgatgtatc aacaggcatt tttattgatg attgggagcg ggtttgtggc ttaacggcga
     6841 atagctcact accgcttgaa acccgaattg agcgtgtgat tgcaaagctg aatcagttgg
     6901 gtggattgtc gataggctat atcactcaag tggccaaaga gcttggatat tgcatcaaaa
     6961 ttagtgagcc acaacccttt attgctgggc taagccgagc tggggatatg ttatggcata
     7021 aagacattat gtggacattt tttgtggata tttgcaaccc cacagatgat tacaagcgtt
     7081 ttagagcaag tgtgtcaatg gctggcgatg cgttaatggg acgatacaaa gacccaattt
     7141 tagaaagtct acttgaagag gtaaaacctg catttagccg tgtgtgggta agatatttag
     7201 gagatattga atgaaacaag tgatgaatcc gattaatacc ccaacacagc gttttaaaga
     7261 tggcaaccct gccactggtg aatatggcac gattgtgact gctgaatttt tgaataacgt
     7321 ccaagattcg gtcattaaca cccaacaaga attgcacagt gtacttgctg aagcaggaat
     7381 cgaagcaaat gacgaacaag ttaatcaggt ggctaaagca atcaagaaaa ttgcgggcga
     7441 tgctactcgt gataatttta acgcattagc caaccctgat ggttacaaac acatcggtcg
     7501 ctgcaaatcg gttgcggagt tacgtactat
//
LOCUS       DANLZQ010000114         7462 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.114, whole genome shotgun sequence.
ACCESSION   DANLZQ010000114 DANLZQ010000000
VERSION     DANLZQ010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7462)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7462)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7462
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.114"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            26..544
                     /locus_tag="PXE50_002228"
     CDS             26..544
                     /locus_tag="PXE50_002228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein"
                     /protein_id="HDL5623091.1"
                     /translation="MQKKLFIAQIKQNLSELNVFSTDNIFLNSPYFSQQTGLVSVFIA
                     EIEKTVELLLNQTEVLYSEFYAEKLVKQVDALKNAVEKIQSKPESAQFHSSYQFSPNI
                     HRLAPNKRLQEYRKALRALNEKISWLVEQNLNTQNEATKQTLQNQITETEYRKMKCLK
                     AIEDLEQELLFK"
     gene            complement(548..621)
                     /locus_tag="PXE50_002229"
     tRNA            complement(548..621)
                     /locus_tag="PXE50_002229"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(587..589),aa:Cys,seq:gca)
     gene            complement(637..712)
                     /locus_tag="PXE50_002230"
     tRNA            complement(637..712)
                     /locus_tag="PXE50_002230"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(677..679),aa:Gly,seq:gcc)
     gene            complement(922..2346)
                     /gene="lpdA"
                     /locus_tag="PXE50_002231"
     CDS             complement(922..2346)
                     /gene="lpdA"
                     /locus_tag="PXE50_002231"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011272714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HDL5623092.1"
                     /translation="MSKEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYSTLGGI
                     CLNVGCIPSKALLHVAKVIEEAKNAVHNGVTFGEPTIDLDQVRAGKEAVVSKLTGGLA
                     GMAKARKVTVVEGLAAFTGPNTLVARDRDGNPTTITFDNAIIAAGSRPIQLPFIPHED
                     PRVWDSTDALKLKEVPKKLLIMGGGIIGLEMGTVYNALGSEVEVVEMFDQVIPAADKD
                     VVAIYTKQIEKKFKLMLETKVTAVEAKDDGIYVSMEGKACNDTKRYDAVLVAIGRVPN
                     GKLIDAGKAGVEVDERGFIRVDKQMRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEV
                     IAGMKHYFDPKVIPSIAYTEPEVAWVGKTEKECKQEGLNYEVAKFPWAASGRAIASEC
                     SEGMTKLIFDKDTHRVLGGAIVGSNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLHE
                     SVGLAAEVFEGSITDLPNAKAKKR"
     gene            complement(2546..4456)
                     /gene="aceF"
                     /locus_tag="PXE50_002232"
     CDS             complement(2546..4456)
                     /gene="aceF"
                     /locus_tag="PXE50_002232"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex
                     dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HDL5623093.1"
                     /translation="MSKQINVPDIGSDEVSVTEVMVKVGDTISVDQSIINVEGDKASM
                     EVPAPEAGVVKEVLVKVGDKVSTGSPMLILESADAAPAQEAPKAEAAPAAPVATTSAV
                     VEVNVPDIGGDEVNVTEIMVKVGDSVEVDQSIINVEGDKASMEVPAPVAGVVKEILIN
                     VGDKVSTGKLIMKFETASAATAQSTPVAEAAPAQASASAIKDVNVPDIGGDEVNVTEI
                     MVKVGDSVSEEQSLITVEGDKASMEVPAPFAGVVKEILVKSGDKVSTGSLIMKFEVAG
                     AAPAPAAAQAASAPAPAPQAAAPAKADAAPAGQNQSGLSQEQVVASAGYAHATPVIRR
                     LAREFGVNLDKVKGTGRKGRIVKEDIQAYVKTAVQVFEKQGGTAAAATGAANGAGLGL
                     LPWPKVDFSKFGEVEEVELSRINKISGANLHRNWVMIPHVTHFDRTDITELENFRKEQ
                     NKEAEKRKLDVKITPVVFIMKAVASALEAFPRFNSSISEDAQRLTLKKYINIGVAVDT
                     PNGLVVPVFKNVNKKGIIELSRELMEVSKKAREGKLTASDMQGGCFTISSLGGIGTTH
                     FTPIVNAPEVAILGVSKSEMQPIWNGKEFEPRLMLPLSLSFDHRVIDGADGARFLSYI
                     NSVLADIRRLVM"
     gene            complement(4660..7317)
                     /gene="aceE"
                     /locus_tag="PXE50_002233"
     CDS             complement(4660..7317)
                     /gene="aceE"
                     /locus_tag="PXE50_002233"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005628834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HDL5623094.1"
                     /translation="MSENLRNDVDPIETQDWLASLDSLIREEGLERAQFIIEQVISQA
                     RAGGVALPTGVTTDYVNTIPVSEQPAYPGDHKIERRIRSAVRWNAIAAVLRSQKKDLD
                     LGGHISTFQSAATMYEVCFNHFFKAPTEKDGGDLVFFQGHAAPGMYGRAFLEGRITAE
                     QMDNFRQEAFTDGLSSYPHPKLMPEFWQFSTVSMGLGPVNAIYQARFLKYLENRGLKD
                     TSAQKVYAFLGDGEMDEIESKGALSFAGREKLNNLIFTISCNLQRLDGPVNGNGKIVQ
                     ELEALFTGCGWEVIKVLWGSGWDKLLEKDTSGKLKQLMMEVLDGDYLTFKSKNGAYVR
                     EHFFGRYPETAALVADMTDDEIWALRRGAHDSEKLYAAYAKAQKSDKPVVILAHQVKG
                     YRIPEAESKNTAHQSKKMSLDSLKGFRDYFELPLTDEQVESLEYVRFPEGSEEYNYLH
                     GQRKALNGYVPVRKPKFTVDFKVPELSEFQALLDEQPRGISTTMAFSRVLNTLLKDKN
                     IGQQIVPIIADEARTFGMEGLFRQIGIYNPHGQNYVPSDRDLVAYYREAKDGQVLQEG
                     INELGATASWVAAATSYSVSNLPMIPFFIYYSMFGFQRVGDMMWLAGDQLARGFMIGG
                     TSGRTTLNGEGLQHEDGHSHIQAGVIPNCVTYDPAFAFEVAVIVQDGIRRMYGENQED
                     IFYYITTLNEITEQPAMPAGAEEGIRKGLYKFETVEGKGKGHVQLLSSGAIMRHVRAA
                     AQILANDYGITADVFSAPSFNELGRDGADVARWNLLHPTETPRVPYVAQVLQDLPTVA
                     STDYMKMYAEQIRAYVPSKHYHVLGTDGFGRSDSRANLREHFEVDERYVVVAALAQLA
                     KEGTVENKVVAEAITKFGLNVDRINPLYA"
BASE COUNT         2122 a         1687 c         1392 g         2261 t
ORIGIN      
        1 attttcttta ttgataacat caaccatgca aaaaaaactt tttatcgccc aaataaaaca
       61 aaacctctcg gaattaaatg tattttcaac ggataatatt tttctgaatt caccctattt
      121 ctcacagcaa accggtttgg tgagtgtgtt cattgctgaa attgaaaaaa cagttgagct
      181 attattgaac caaactgagg tgttatatag tgaattttac gctgaaaaat tggttaaaca
      241 agttgatgca ttaaagaatg ccgtagaaaa aatccaaagt aagccagaat cagctcaatt
      301 ccattcttcc tatcaatttt ctccaaatat tcatcgttta gcgcccaaca aacgcttaca
      361 agaataccgt aaagcgttac gtgcattgaa cgagaaaatt agctggttag ttgagcaaaa
      421 tttaaatacg caaaatgaag caactaaaca aaccctgcaa aatcaaatta cagagacaga
      481 atatcgcaaa atgaaatgtt taaaagcaat tgaagattta gaacaagagt tgctatttaa
      541 atagtgatgg aggcgtgtcc cggagtcgaa ccgagctaca tggatttgca atccagtgca
      601 taaccgcttt gctaacacgc cataagattt ggaaattgga gcgggaaacg aggctcgaac
      661 tcgcgacccc gaccttggca aggtcgtgct ctaccaactg agctattccc gcatctgaat
      721 tcccacaaca ttgcgctgtg gaacgaggtg cattttacgg atttatcatt ttatgtcaat
      781 gctaaattta acattctaga ttcaaatgct gaaaaaaaac tcactattca atagtttagt
      841 tttaaaaata atcaagcggt tgtattttgc aaaaaattta caaaatacaa ccgcttattt
      901 tttagagatt aaataatctg attaacgctt tttggctttc gcatttggta agtctgtaat
      961 tgaaccttca aatacttctg ccgctaatcc taccgattcg tgtaacgttg ggtgagcatg
     1021 aatggttaat gcgatatctt cagcatcaca gcccatttcg attgcaagac cgatttcgcc
     1081 taataattcg ccaccattgc taccaacaat cgcaccacct aatacacggt gagtatcttt
     1141 atcaaaaatt aacttggtca taccttctga gcattcagaa gcaatcgcac gacctgaagc
     1201 agcccaaggg aatttcgcca cttcgtagtt caagccttct tgtttacact ctttctcagt
     1261 tttaccaacc caagccactt ctggttcagt ataagcgatg gacggaatga ctttcggatc
     1321 gaagtaatgt ttcattcctg caatcacttc tgctgccacg tgtccctcgt gtacaccttt
     1381 gtgagctaac atcggctggc cgacaatatc accaatagca aagatgtgtg gcacattggt
     1441 acgcatttgt ttatctacac gaataaagcc acgctcatct acttccactc cagctttacc
     1501 ggcatcaatt aatttaccgt ttggcacacg tccgatagcg actaataccg catcataacg
     1561 tttagtatcg ttgcaagcct taccttccat tgatacatag ataccgtcat ctttagcttc
     1621 tactgcggtt actttggttt caagcattag cttgaatttt ttctcgattt gtttggtgta
     1681 aatcgctaca acatctttat ctgcagcagg aattacttgg tcgaacattt caaccacttc
     1741 cacttctgaa ccaagcgcgt tatataccgt tcccatttct aaaccgataa taccaccacc
     1801 cataataagg agttttttcg gtacttcttt taatttaaga gcatcggttg aatcccaaac
     1861 tcgtgggtct tcgtgtggaa taaatggtag ttgaatcgga cgagaacctg ctgcgataat
     1921 cgcattatcg aacgtgatag ttgtaggatt gccgtcacga tcacgagcga ctaacgtatt
     1981 cggaccagta aatgcagcca agccttctac tactgtcact ttacgagcct tagccattcc
     2041 tgctaagcca ccggttaatt ttgaaacaac ggcttcttta ccagcacgta cctgatctaa
     2101 atcaatcgtt ggctcaccaa aggtcacacc gttgtgtact gcatttttag cttcttcaat
     2161 tacttttgca acgtgtaata atgctttaga agggatacaa cctacgttta agcaaatacc
     2221 acctaaggtt gaataacgct caacaattac tgtttctaag cctaagtcgg cacaacggaa
     2281 tgccgctgag taacctgctg gacctgcacc aagtacgaca acttgggttt taatttcttt
     2341 gctcatagtt tttcctcttt ttattccccc cctttagcaa agaggggtaa gggagatttg
     2401 gcagaatata aagcgaagtg agagagcaat caatcaaaca caaatttcta ccaaataatt
     2461 tattctcttc gtaaattacg tctatcaaat ctccccctac ccctcttttc taaagaggga
     2521 cttttttagg aggagcttta ccgaattaca tcactaaacg acgaatatct gccaacacgc
     2581 tattaatata gcttaagaat ctcgcaccat cagcaccatc gatcacacgg tggtcgaatg
     2641 ataatgaaag cggaagcatt aagcgtggtt caaactcttt gccattccaa atcggttgca
     2701 tttcagattt agacacacct aaaatagcca cttccggtgc attcacgatt ggcgtaaagt
     2761 gcgttgtacc aataccgcct aaacttgaaa ttgtgaaaca gccaccttgc atatcagatg
     2821 ctgtcaattt accttcacgg gcttttttcg agacttccat taattcgcga gaaagttcga
     2881 taatgccttt tttgttcaca tttttgaaca ccggcaccac taaaccgttt ggcgtatcaa
     2941 ccgcaacccc gatattgatg tattttttca aggttaaacg ttgtgcatct tcagaaattg
     3001 agctgttgaa acgagggaag gcttctaatg cacttgccac tgctttcata atgaagacca
     3061 caggggtaat tttcacgtct aatttacgtt tttccgcttc tttattttgc tctttacgga
     3121 agttttctaa ctcggtaatg tctgtgcgat cgaaatgtgt aacgtgagga atcattaccc
     3181 agttacggtg taagttcgca ccggaaatct tattgatacg gcttaattca acttcttcaa
     3241 cttcaccaaa cttgctgaaa tctactttcg gccacggtaa taaacctaag cctgcaccgt
     3301 ttgccgcacc tgttgctgcc gctgctgttc cgccttgttt ttcaaatact tgaacagccg
     3361 ttttaacgta tgcttgaata tcttctttaa cgatacggcc tttacgacct gtacctttta
     3421 ctttgtctag gtttacacca aactcacgag ctaaacggcg aattaccggt gttgcgtgtg
     3481 catagccagc tgaagccacc acttgttctt ggcttaaacc tgattggttt tgacctgccg
     3541 gagctgcgtc agctttcgcc ggagctgctg cttgtggagc aggagcagga gctgaagccg
     3601 cttgagcagc cgccggagcc ggtgccgcac ccgctacttc aaatttcata attaatgaac
     3661 cggttgaaac tttatcacct gatttcacta aaatttcttt caccacaccg gcaaatggag
     3721 ccggaacttc cattgaagct ttatcacctt caaccgtgat taaagattgt tcttctgaaa
     3781 cagaatcacc cactttaacc ataatttcag ttacgtttac ttcatcacca ccgatgtccg
     3841 gtacatttac atctttaatc gctgatgccg aagcttgagc tggagcagct tccgcaaccg
     3901 gtgtagattg tgctgtagct gcggaagccg tttcaaattt cataatcaat ttaccagttg
     3961 aaactttgtc acccacattg attaagattt cttttactac gccggcaacc ggtgcaggca
     4021 cttccattga ggctttatca ccttcaacgt tgatgataga ttgatccact tcaacgctat
     4081 cacctacttt aaccataatt tcggttacgt taacttcatc gccaccgata tcaggtacat
     4141 ttacttcaac aacggctgaa gttgttgcta ctggagcagc aggagctgct tctgcttttg
     4201 gtgcttcttg agcaggagca gcatctgctg actctaaaat taacattggt gaaccggttg
     4261 aaactttatc acccactttc actaaaactt cttttaccac acctgcttca ggagccggca
     4321 cttccataga ggctttatcg ccttctacgt taataattga ttgatctact gaaatagtat
     4381 caccaacttt taccatcact tcagtcacac tgacttcatc cgaaccgatg tccggcacat
     4441 taatttgttt tgacattttg aaatccttct tgagttaccc cctctcccat tgtgggaggg
     4501 acagattttt ctttgtaaga agaaaaatca gggagaaggg aatgcaagcg gttgattttc
     4561 tcaacatttt tgcaaataaa actaataccc tctctgctaa aagtttctaa acgaaacctt
     4621 tagctgtctc tctcccatca agggagagag tattagaaat tacgcatata atgggttaat
     4681 acgatctaca tttaagccga atttagtaat agcttccgca accactttgt tttcaactgt
     4741 accttctttc gctaattgag cgagggctgc aactactaca taacgctcat caacttcgaa
     4801 gtgttcacgt aagtttgcac ggctgtctga acgaccgaaa ccgtctgtac ctaacacgtg
     4861 atagtgttta cttggtacat aagcacggat ttgctctgcg tacattttca tatagtcggt
     4921 tgaagcaaca gtcggtaaat cttgtaacac ttgagcaacg tacggtacac gtggtgtttc
     4981 agttgggtgt aataagttcc aacgagccac atctgctcca tcacgaccta attcattgaa
     5041 tgatggtgct gagaatacat ctgctgtaat gccgtagtca ttcgcgagaa tttgtgcagc
     5101 tgcacgcacg tgacgcataa ttgcacctga gcttaataat tgtacgtgac ctttaccttt
     5161 accctcaacg gtttcaaatt tatataaacc tttacggata ccttcttccg cacctgccgg
     5221 cattgccggc tgttcggtaa tttcatttaa ggtagtaatg tagtagaaga tatcttcttg
     5281 gttttcacca tacatacgac gaataccgtc ttgaacaata accgcaacct caaaggcaaa
     5341 tgcagggtca taagtgacgc agttcgggat tacacctgct tgaatatggc tatgaccatc
     5401 ttcgtgttgt aaaccttcac cgtttaatgt tgtacgacct gaagtaccac caatcataaa
     5461 gccacgagct aattggtcac cggctaacca catcatatcg cctacacgtt ggaaaccaaa
     5521 cattgagtag tagatgaaga atgggatcat cggtaagttg ctaacagaat aagaagtcgc
     5581 tgctgccacc caagaggctg ttgcacctaa ctcattgata ccttcttgta acacttggcc
     5641 atcttttgct tcacggtagt aagctactaa atcacggtct gacggtacat agttttgacc
     5701 atgtgggtta taaataccga tttgacggaa taaaccttcc ataccgaaag tacgggcttc
     5761 gtccgcaata ataggtacga tttgctgacc gatattttta tctttcaata aagtattcaa
     5821 tacacgagag aacgccattg tggttgaaat accacgtggt tgctcatcca ataatgcttg
     5881 gaattcgctt aattcaggca ctttgaaatc aaccgtaaat ttcggtttac gtacaggcac
     5941 ataaccgttt aaggctttac gttgtccgtg taagtagttg tactcttcag aaccttcagg
     6001 gaatcttaca tactctaggc tttctacttg ctcatcggtt aatggtagct cgaagtagtc
     6061 acggaagcct tttaagctgt ctaatgacat ttttttcgat tggtgagcag tatttttact
     6121 ttccgcttca ggaatacggt agcctttcac ttggtgagct aaaattacaa ctggtttgtc
     6181 cgatttttgt gcttttgcat aggctgcata aagtttttca gaatcgtgtg caccacggcg
     6241 taatgcccaa atttcatcgt ctgtcatatc agcaactaat gctgcagttt cagggtaacg
     6301 accgaagaag tgttcacgaa cgtaagcacc atttttggat ttgaaggtta aatagtcacc
     6361 atcaagcact tccatcatta actgtttaag tttgcctgaa gtatcttttt caagcagttt
     6421 atcccaacca ctaccccata acactttaat cacttcccag ccacaaccgg taaagagtgc
     6481 ttctaattct tgcacgattt tgccgttacc gttaaccgga ccgtctaaac gttgtaagtt
     6541 acagctaata gtgaagatta agttatttaa tttttcacga ccggcgaatg ataatgcacc
     6601 tttagattcg atttcatcca tttcgccatc gcctaagaat gcatatactt tttgagccga
     6661 agtatctttt agaccacggt tttctaaata ttttaagaaa cgagcttggt aaatagcatt
     6721 taccggtcct aaacccatag atacggtaga gaattgccaa aattcaggca ttaatttagg
     6781 gtgtgggtaa gaagataaac cgtctgtaaa tgcttcttga cggaagttat ccatttgttc
     6841 tgcggtaata cgaccttcta agaacgcacg accatacata cccggtgctg cgtggccttg
     6901 gaagaacact aaatcaccac catctttttc ggttggtgct ttgaaaaagt ggttaaaaca
     6961 cacttcatac atagttgccg cagattggaa agttgaaata tgaccaccta agtcaagatc
     7021 tttcttctgg ctacgaagta ctgccgcaat cgcattccaa cgtaccgcag aacgaatacg
     7081 acgttcgatt ttatgatcac ccggataagc tggctgctcg gaaacaggga tagtattgac
     7141 ataatctgtt gttacgcctg ttggtaatgc cacgccacct gcacgagctt ggctaataac
     7201 ttgttcaatg ataaattgag cgcgctctaa accttcttca cgaattaatg aatcgagtga
     7261 tgctaaccaa tcctgagttt cgattggatc tacgtcattt cttaagttct ctgacatagt
     7321 attcttcctt ataaattaac gattgaggtg ataaataaca aaattttaac aaattttgtt
     7381 tgtttggtga tttttagacc aattcttatc gaaaaaattt cagtaaaaca acaatttccg
     7441 aattaaacct ctcttgaggc at
//
LOCUS       DANLZQ010000115         7336 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.115, whole genome shotgun sequence.
ACCESSION   DANLZQ010000115 DANLZQ010000000
VERSION     DANLZQ010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7336)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7336)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7336
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.115"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(<1..2152)
                     /locus_tag="PXE50_002234"
     CDS             complement(<1..2152)
                     /locus_tag="PXE50_002234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HDL5623095.1"
                     /translation="MTLDRFCIALILFHLPILWLPKAFLFVGIVIGTLVLILSVYLRS
                     KLTAVLGLLVCIGYIQIIQVAKNAEKTTASKTPVQFEISKILKQTDYQTAIATLNTGE
                     KIYLNWQSKQPLLLNQFYQAELALRPISARSNIGNFDRQRWYFANHINMTATVRKVET
                     LAKTDYSLRTNWLNKVKAETDALPTQGFLLALAFGERAWLKTEHWGQFQQTATAHLIA
                     ISGLHIGLAMLFGVYFAKGVQWLCLKSELTALQAVGFSLYFARIVSFITAFGYSYLAG
                     FAVPTARALLAIAFVLLCQVLRRHYTPWQYWGRIVALLILIDPLSLLSDSFWLSILAV
                     ASLILWYQYFPLSRFLNDEYRKKITKFNRLWLSLLHLQIGIWLIFSPVQLYFFEGISA
                     FALLANLIIVPLYSFLLVPLILFTLLTDNLFSTWLLADYLAQFSLWLLDPFSNAWFAL
                     SHWQQWQLLSLNLLVLVLLYCKLYRLSYKKWLSAVAVSLLFNLSFYLPKLFNQTQTEW
                     IMFDVGQGLAMAFIYQQNKAVIYDTGSSWQANDGSRNSMAKMEILPYLKRNGIEVEAI
                     FLSHDDNDHSGGVVELLQAYPKARLISSSKVTYHNINPEPCIAGTSWQFGEWQLLAIY
                     PSHIAERAKNQDSCVILAKNDRLKILLTGDSGVEQERQFAHQLGKIDFLQVGHHGSKS
                     STGETLLSITQPAFAVISAGRWNPWKLPNKQIIER"
     gene            complement(2294..3508)
                     /gene="sstT"
                     /locus_tag="PXE50_002235"
     CDS             complement(2294..3508)
                     /gene="sstT"
                     /locus_tag="PXE50_002235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HDL5623096.1"
                     /translation="MSQSLSSKILGGNLVLRIAIGLVLGVLLAFINKEWATSVGVLGQ
                     FFVKSLRAIAPILVFVLVLAAIANKEVGSDSKLKPILVLYVLGTFFAALTAVVLSFMF
                     PTTLELTASPDGLTPPQGIGEILKTVIFNLVDNPLVALSNANFIGILAWSIGLGIAFR
                     HGSASSKAFLNDLANAVSFVVKVVIAFAPIGVFGLVAETVAINGIDAFEDYARLLVVL
                     VGAMLFVALVLNPLLVYWKIRRNPYPLTFTCLRESGVTAFFTRSSAANIPVNMNLAKR
                     LGVRDEIASVAIPLGASINMAGAAITVTVLTLAAAYTQGIQPDFATALLLSVVASICA
                     CGASGVAGGSLLLIPLACSLFNIPNDIAAQVIGVGFVIGVIQDSVETALNSSTDVLFT
                     AAVSYAEDQKSA"
     gene            3763..4125
                     /locus_tag="PXE50_002236"
     CDS             3763..4125
                     /locus_tag="PXE50_002236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HDL5623097.1"
                     /translation="MKPTNKADFQRVINAAGYSMKGLKAAYINEAAFRQEIWCATILF
                     PLGLILGETNIEKALLVGTVLLVLVTELLNSAVESVVDRIGADFHELSGRAKDIGSAA
                     VFMAMVLLAITWILILFC"
     gene            4162..5805
                     /locus_tag="PXE50_002237"
     CDS             4162..5805
                     /locus_tag="PXE50_002237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-sugar
                     hydrolase/5'-nucleotidase"
                     /protein_id="HDL5623098.1"
                     /translation="MRLKKTLLSVALLSATSAMAYETGKTYRFTVLHTNDIHGHFWQS
                     DKGEYGLAAQKTLVDNIRKEVAEKGGSVLMLNAGDANTGVPESDMQNARPDIEGMNAI
                     GYDAMVLGNHEFDYPLQILSMQEKWAKFPFISANVINKKTDKPIVKPYVMLERGGLKI
                     AVIGLTTEDTAKLGNPDVTENAFFKNPIETAKNTLAEINQKEKPDVRIALTHMGYYFD
                     GKHGTNAPGDVTMARTLEKGAFDLIIGGHTHDTVCIDEKGQFKAKYTPGEECKPDFQN
                     GTWIVQAGEWGKFVGRADFEFKDGKATLVKYELIPVNLKKTIKKEDGTKEYRLYQPEI
                     KADEATYTLLKKYQDEGDKKLNIEVGRVKGLLDGKREHIRFQQTNLGRLIAQSQMERV
                     KADIGIMNSGGIRTSLEEGVITYKHILTVQPFGNMIATVDLKGQELLDTLTTIALKEV
                     DTGAYPQFAGISMVVDRTAKTISDVKIGGKPFDKEKTYKVSLPDYVAAGGDGYPLLKK
                     HPSYVNTGFIDAEMLKKFFEENKIIEADKYDPKNQIIFK"
     gene            complement(6012..6881)
                     /locus_tag="PXE50_002238"
     CDS             complement(6012..6881)
                     /locus_tag="PXE50_002238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HDL5623099.1"
                     /translation="MSSRGKILNTISSLQNSLTKTEKKIAAAILSQPELLSQCSLSEV
                     AKQLDVGEATFIRFCRTLGFKGYTDFKLELAIELATQNQDNRVLLDTDVSESDTSKDI
                     AEKLKVSLDNVIEETINLLDFNVLEKVVEELRKAKRIFLFGVGSSGLTAEDAKHKLMR
                     IGLQTDAVTNNHFMYMQAALVKEGDLVIGISHSGYSEEIVKSLRFSRANKATTVAITH
                     NLRSPVTEEANYVLINGNRQGHMQGDSIGTKMSQLFVLDLIYTLLVKAEPENALKQKQ
                     KTLNVILEQRVKG"
     gene            complement(6891..>7336)
                     /locus_tag="PXE50_002239"
     CDS             complement(6891..>7336)
                     /locus_tag="PXE50_002239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YhcH/YjgK/YiaL family protein"
                     /protein_id="HDL5623100.1"
                     /translation="RDDYLKSLPPVFARLCKKLKSLDLVNLELGWQELENGIRMNVMS
                     FETTPAEGKKAELHRKFIDIQLLIDGEEMIEYGLSQPDLSKYDEYRDEDDYQLTAEID
                     DKNNLILKPNMFAIFLPYEPHKPGNSVNGNKTLKKLVVKVPVELI"
BASE COUNT         2380 a         1478 c         1337 g         2141 t
ORIGIN      
        1 atctctcaat aatctgttta ttcggtaatt tccatgggtt ccatcttcca gcagaaatca
       61 ctgcaaatgc tggctgggta atcgataata aagtttcgcc agtgctgctt ttgctaccgt
      121 gatgtccaac ctgtagaaaa tcaattttgc cgagctgatg ggcaaattgg cgttcttgtt
      181 ccacgccaga atcccctgtc agtaatatct tcaagcggtc gtttttggct aaaataacgc
      241 aagagtcttg gtttttagct cgttctgcaa tgtgtgacgg gtaaattgcc aataattgcc
      301 attcgccaaa ttgccacgat gttccggcaa tacaaggctc gggatttata ttgtgatacg
      361 tcaccttgct tgaactaatt aaccttgctt ttgggtatgc ttgcaataac tccactaccc
      421 cacctgaatg atcattatca tcgtgactta gaaaaatcgc ctctacctca atgccatttc
      481 gctttaaata cggcaagatt tccatttttg ccattgaatt gcgactacca tcatttgctt
      541 gccaactgga gccggtatcg taaattaccg ctttattttg ttgataaatg aacgccattg
      601 ccagcccttg cccaacatca aacataatcc attctgtttg ggtttgatta aagagcttag
      661 ggagataaaa actcagattg aacaataggg ataccgctac tgcacttaac cactttttat
      721 aagatagccg atataatttg caatacagca atactaaaac caataaattc agtgaaagta
      781 actgccactg ttgccaatgg cttaatgcaa accacgcatt agaaaatgga tctaacagcc
      841 ataggctaaa ttgagcaaga tagtccgcca acagccacgt tgaaaacaga ttgtcggtca
      901 agagcgtaaa taaaataagc ggtacaagca aaaagctata caacggcaca ataatcaggt
      961 tggcaagcag tgcaaaagca gagatgccct caaaaaagta gagttgaacc ggtgagaaaa
     1021 tcagccaaat gccgatttgt aagtgcaaaa gcgataacca caagcggtta aattttgtga
     1081 tttttttacg atattcatcg tttaaaaatc ggctaagagg aaaatattga taccataaaa
     1141 ttaaacttgc taccgctaaa attgagagcc aaaaactatc agaaagcagg ctcaatgggt
     1201 caattaaaat cagtaacgcc actattctcc cccaatattg ccaaggggta tagtgtcgcc
     1261 gcagaacttg gcaaagcaag acaaacgcaa tcgccagcaa cgctctggcg gtcggcacgg
     1321 caaaaccggc taaatagctg taaccaaatg cggtgatgaa gctaactatt cttgcaaaat
     1381 aaagtgaaaa tccgaccgct tgtaatgcgg taagctcgct tttcaagcaa agccattgca
     1441 cgcctttggc aaagtaaaca ccaaacaaca ttgccagccc gatatgcaag cctgaaatgg
     1501 caattagatg ggcagtagcg gtttgttgga attgccccca gtgttctgtt ttcagccacg
     1561 ccctttcacc aaaagccaga gccaataaaa agccttgcgt aggcaaagcg tccgtttcag
     1621 ctttcacttt attcagccaa tttgttcgca agctataatc agttttggct aatgtttcca
     1681 ccttgcgaac cgttgctgtc atattgatat gattggcaaa ataccaacgc tgtcggtcaa
     1741 aattaccgat attgctacga gctgaaatag gacgaagagc cagttcggct tgatagaatt
     1801 gattaagtaa caacggctgt ttcgattgcc agttcaagta gatcttctcg cctgtattta
     1861 gtgtcgcaat cgctgtttga taatcggttt gttttaagat tttactgatt tcaaattgaa
     1921 caggcgtttt actagcagtc gttttttccg cattttttgc aacttgaatg atctgaatat
     1981 agccaataca aaccaataag ccgagtacag ccgttaattt tgagcgtaga taaacactca
     2041 atatcagcac taaggttcct attactatac ccacaaatag aaacgcttta ggcaaccata
     2101 aaataggcag atgaaataga atcagggcaa tacaaaaacg gtctaaagtc ataattcggc
     2161 ttacttttta aagctgagta tgccgtttgt gcttaatatt ttcagaataa attttcagat
     2221 tttcgacaca gttcgcaaaa atacttgaaa aaataaaggc agacttttta gcctgcctta
     2281 taaagaagag atattatgct gatttttgat cttcagcgta acttactgct gcagtgaata
     2341 atacgtctgt tgatgaattt aatgcggttt caaccgagtc ttgaatcaca ccaatcacaa
     2401 aacccacccc aattacttga gcagcaatat cgtttggaat attaaataaa ctacaggcta
     2461 atggaatcaa taataatgaa ccgcctgcca cacctgatgc gccacaagca cagattgatg
     2521 caactacgct taatagtagt gctgttgcga aatcaggttg aataccttgt gtataagctg
     2581 ccgctagggt taatacggtt acagtaatcg ctgcacctgc catattaata cttgcaccta
     2641 atggaatagc tacagaagcg atctcatcac gaacgcccaa acgcttggct aaattcatat
     2701 tcaccggaat gttggctgct gaactgcggg taaagaatgc cgttacacca ctctctcgta
     2761 aacaggtaaa tgtaagtggg tatgggttgc ggcgaatttt ccaatacact aataatggat
     2821 ttagtactaa tgccacaaat aacattgcgc caactaagac tactaataaa cgtgcgtaat
     2881 cttcaaacgc atcaatacca ttgatggcaa cagtttcagc tactaaacca aataccccaa
     2941 taggcgcaaa tgcaatcaca actttcacaa caaacgaaac tgcgttagct aaatcattta
     3001 agaatgcttt tgaacttgcc gaaccatggc ggaatgcaat ccctaaaccg atagaccacg
     3061 caagaatacc gataaagttt gcattactta atgcgactaa tggattatca actaagttaa
     3121 aaataacggt ttttagaatt tcaccaatgc cttgtggcgg ggttaaaccg tctgggcttg
     3181 cagtaagctc taatgtagtt gggaacataa agcttaaaac aacagccgtt aatgccgcaa
     3241 aaaatgtacc taatacataa agcaccagaa tcggctttaa tttgctatct gaaccaactt
     3301 ctttatttgc aatcgcagcc aaaactaata caaatactaa aataggcgca atggcacgta
     3361 gtgatttcac aaaaaattga cctaatacac caacgctggt agcccattct ttattaataa
     3421 atgccagcaa tacccctagc actaaaccaa tggcgatacg taatactaaa ttaccgccaa
     3481 gaatttttga tgataatgat tgactcataa cccttcactt ctgtaagaca acaaaaaata
     3541 aggataaata aaatttatcc gcctgaaaaa ataggtttat aagattagcg gaaaataaac
     3601 aaatatggaa taaacaagcg gtttattttt cagatttttt tacaaaaaag tgaagttttt
     3661 tacattccat ggctatcata ttattttttc cttaggttct ttgaacatca ccattctttc
     3721 agtacaatag ttctctaaac tcttttattt attttattta ctatgaaacc aaccaataaa
     3781 gcagattttc aacgtgtgat caatgcagct ggctactcta tgaaggggtt aaaagccgct
     3841 tatattaatg aagccgcctt tcgccaagaa atttggtgcg ctactatttt attccctcta
     3901 gggcttattc taggcgaaac caatattgaa aaagcattat tagtaggcac agttttactt
     3961 gttttagtta cagaactact caatagtgcg gttgaatctg ttgttgaccg cattggggct
     4021 gatttccacg agctttctgg tagagctaaa gatattggct ctgcagctgt atttatggcg
     4081 atggttttac tcgctataac ttggatatta attttgtttt gttaactcta tttttcaacc
     4141 aacactctta ctgaggtatt tatgcgctta aaaaaaacat tactttcggt agcactactt
     4201 agtgcaacat cagcaatggc ctacgagaca ggtaaaacat atcgttttac ggttttacat
     4261 actaacgata tacacggtca cttttggcaa agtgataaag gcgaatacgg tctcgctgct
     4321 caaaaaacat tggttgataa tattcgcaaa gaggtcgcag aaaaaggtgg ttcggtatta
     4381 atgctgaatg caggtgatgc gaatacaggc gtgccggagt cagatatgca aaatgcacgt
     4441 cctgatattg aaggaatgaa tgcgattggt tacgatgcaa tggttctagg taatcacgaa
     4501 tttgattacc cactgcaaat tctctctatg caagaaaaat gggctaaatt cccctttatt
     4561 tcggccaatg tcattaataa aaaaacggat aaacccattg taaaacctta cgtgatgtta
     4621 gaacgaggcg gactaaaaat tgctgttatc ggattaacaa ccgaagatac cgcaaaatta
     4681 ggtaatccag atgtaacgga aaatgccttt ttcaaaaacc ctattgaaac agcaaaaaac
     4741 acattagctg aaattaatca aaaagaaaaa cccgacgtac gtatcgcttt aacccatatg
     4801 ggttactatt ttgacggtaa acatggtact aatgcaccag gtgatgtaac aatggcccgt
     4861 accttagaaa aaggagcgtt cgatttaatc attggcggtc atacccacga tactgtttgt
     4921 attgatgaaa aaggtcaatt caaagccaaa tatacgccgg gtgaggaatg taaaccagac
     4981 ttccaaaacg gtacttggat tgtgcaagcc ggcgaatggg gcaaatttgt tggacgggct
     5041 gattttgagt ttaaagatgg aaaagctacc ttggtaaaat atgaattaat tccggtcaac
     5101 ttaaaaaaaa ccattaaaaa agaagacggt actaaagaat accgacttta ccagcctgaa
     5161 atcaaagccg atgaagcaac ctatacctta ttgaaaaaat atcaagatga gggcgataaa
     5221 aagcttaata ttgaagttgg tcgtgtgaaa gggttattag acggcaaacg tgagcatatt
     5281 cgcttccaac aaaccaatct cggtcgttta attgcacaat cgcaaatgga aagggtaaaa
     5341 gccgatatcg ggattatgaa ctccggcggt attcgtacct cccttgaaga aggtgtaata
     5401 acttataaac atattctgac tgttcaacct ttcggtaata tgattgcaac ggtggattta
     5461 aaaggacaag aattgttaga taccctcacc actattgctc tgaaagaagt tgatactggc
     5521 gcttatcctc aatttgccgg catttcaatg gtagtcgacc gtacagcaaa aactatttct
     5581 gatgttaaaa tcggtggcaa accttttgat aaagagaaaa cttataaagt ttctctgcct
     5641 gactatgttg cggctggtgg cgatggctac ccattactga aaaaacaccc tagctatgtc
     5701 aatacaggct ttattgatgc cgaaatgctg aaaaaattct tcgaagaaaa taaaattatt
     5761 gaggcagata aatacgatcc aaaaaaccag atcattttca aatagagcta tagaaaatga
     5821 aactcactct ggcagtctct gctcaaaaga gctgtggctg cctgtagatt gttttcttac
     5881 tttcaagtgt tataggaaat cgataaaaaa tccctaccaa attaattcat caccatatga
     5941 tgaaaattaa aaaacctctg gcaatacttt gccaaaagtc tttgactttt atagggtaat
     6001 atcactgctt attagccttt aacacgttgt tccaaaatca cattcagtgt tttttgtttc
     6061 tgtttcaacg cattttcggg ttcggcttta actagtaagg tataaattaa atcaagaacg
     6121 aaaagttgtg acattttagt accgatagaa tctccttgca tatgcccctg tcgattacca
     6181 ttaattaaca cataattagc ctcttccgtg acgggggaac gtaaattgtg tgtaatcgca
     6241 accgttgtcg ctttatttgc acgagaaaaa cgtagtgatt tcacaatttc ttcagaatag
     6301 cctgaatgac taatccctat aactaaatcc ccctctttca ccaatgccgc ctgcatatac
     6361 ataaaatgat tatttgtgac tgcatcggtt tgtagcccaa tacgcattaa tttatgtttt
     6421 gcatcttctg cggttaaccc agaagaaccc actccaaata aaaagatccg ttttgcctta
     6481 cgtaattctt caacaacttt ttccaacacg ttaaagtcaa gcaaattaat agtctcttca
     6541 ataacgttat ctaaactcac tttgagcttc tcagcaatat ctttcgatgt atccgattct
     6601 gaaacatccg tatcaagcaa tactctatta tcttgatttt gcgtagccaa ctctattgca
     6661 agctctaatt taaagtcggt ataaccttta aaacctaatg tacgacaaaa acgaataaaa
     6721 gttgcttcac caacatctaa ttgtttggcc acttcagata atgaacattg gctaagtaat
     6781 tccggctgag ataaaatagc agcagctatt ttcttctctg ttttggttaa actattttgt
     6841 agcgagctaa ttgtattaag aatttttccc cgactagaca tagtagcctc ctaaatcaat
     6901 tcaacaggta ctttcaccac cagttttttc aatgttttgt tgccattcac cgaatttcca
     6961 ggcttatgtg gttcataagg gaggaaaata gcgaacatat ttggcttgag gatcaagtta
     7021 tttttatcat caatctcagc tgttaattgg tagtcatctt catctcgata ttcatcatac
     7081 ttagataaat ctggctggct taacccgtat tcaatcattt cttcgccgtc tatcaataat
     7141 tgaatatcga taaattttcg gtgtaactct gcttttttcc cctcagctgg cgtagtttca
     7201 aatgacatta cattcatgcg aataccattt tctaattctt gccagcctaa ttccaaatta
     7261 actaaatcta aactttttaa ttttttacaa aggcgagcga atactggtgg aagagatttt
     7321 aaataatcat ctcttg
//
LOCUS       DANLZQ010000116         7118 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.116, whole genome shotgun sequence.
ACCESSION   DANLZQ010000116 DANLZQ010000000
VERSION     DANLZQ010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7118)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7118)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7118
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.116"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            34..357
                     /locus_tag="PXE50_002240"
     CDS             34..357
                     /locus_tag="PXE50_002240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL5623101.1"
                     /translation="MKLSSELQNQINQLNQLRKQALKQEQDEQKLFEKNKIEDLPHFG
                     TQLNAQRKLLGIELTTLEMQTGISSSTLKRLFKDPSQVKFQTICIVAETLGFNLCAIN
                     THKQE"
     gene            complement(434..1452)
                     /gene="glpX"
                     /locus_tag="PXE50_002241"
                     /pseudo
     CDS             complement(434..1452)
                     /gene="glpX"
                     /locus_tag="PXE50_002241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484632.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
     gene            1649..1867
                     /gene="zapB"
                     /locus_tag="PXE50_002242"
     CDS             1649..1867
                     /gene="zapB"
                     /locus_tag="PXE50_002242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011201404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapB"
                     /protein_id="HDL5623102.1"
                     /translation="MSLSVLDQLEEKIKQAVETIQLLQLEVEELKGKNDAAKQENDTL
                     RSEYEQLKVEQQNFQDRLRSLLGQIDNV"
     gene            1923..2504
                     /locus_tag="PXE50_002243"
     CDS             1923..2504
                     /locus_tag="PXE50_002243"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014064645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HDL5623103.1"
                     /translation="MAKLYFYYSSMNAGKSTTLLQSSYNYQERGMNTLVYTAAIDDRF
                     GVGKVNSRIGISQEANLFTADTNLFAEIKALHSNKALHCILIDEAQFLTKTQVYQLSD
                     VVDKLKIPVLCYGLRTDFQAELFEGSKYLLAWADELEELKTICDCGKKAHFVVRLNEK
                     GEAIKDGEQIQIGGNDRYLSVCRYHYKQKLGKL"
     gene            complement(2595..3713)
                     /locus_tag="PXE50_002244"
     CDS             complement(2595..3713)
                     /locus_tag="PXE50_002244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic sulfatase maturase"
                     /protein_id="HDL5623104.1"
                     /translation="MTTTYFHLMAKPSSFHCNIQCEYCFYLSKEQTIPPEKSQFMNDE
                     TLQNYIRHYIEANQSQRVDFVWQGGEPTLLGLDFYKQAVKYQQKFANGKQITNAIQTN
                     GIALNRQWASFFKENHFLVGLSIDGLSDIHDRYRISTNGKPTFERVKSAVDLLKEVGV
                     EFNTLTVVNDRNWQRGRETYQALKALGSRYMQFIPVVESHKGELQPFSVPPQGYGQFL
                     VDVFHEWLPDRGQIFVIEFDNLLGQWLGYPSNNCVFRPTCGSSLVVEACGDVYSCDHF
                     VYPDYHIGNLNQQQLAEIVSSAAQRQFGQNKQAKLSQACLNCKFRILCHGGCPKHRIV
                     PQANSENHNYLCPSYQQFFAETSSVMRQMSEQIRFAGK"
     gene            complement(3803..5251)
                     /locus_tag="PXE50_002245"
     CDS             complement(3803..5251)
                     /locus_tag="PXE50_002245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HDL5623105.1"
                     /translation="MNNIIYILLDQVRKDMLGTYGHQVVKTPNLDRLAKDGIRFNNAF
                     TPASVCGPARTSLFTGLMPSSHGIIKNGEKGGTGEIPQQNPNIAGVEGYNSFVIGKWH
                     VGTKSVPEDYGIAGHNFDGYGYPGSQVYKNLVFNQPPTHSNRYREWLAEKGYDAPEVS
                     RAYFGDNPHLRVQELCGLLSGSREQTIEWFIIDEAKKYIQASLDEKKPFFAWINFWGP
                     HTPCVVPEPYYSMYDPSQVVLDESFFKPLEGKPNHFRTISQMWGMWEASEDRWKEVIS
                     KFWGYITLIDDAIGELFRFLEENNLYENTFLVATADHGDAMGAHKMIEKGEFMFETTY
                     NIPLIIKDPHSTRVNEVDDNLVYLHDLTSTVYDVANQPIPTAFQGESILPITRQSQNN
                     DRKGLLCQLAGHFVYFEQRMWRRKDYKLVFNATDRCELYDVRKDPEEMHNLFYDEAYQ
                     AVKKEMLEEMRQEMKRLNDPLENWVYRIIDEI"
     gene            complement(5398..7095)
                     /locus_tag="PXE50_002246"
     CDS             complement(5398..7095)
                     /locus_tag="PXE50_002246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="solute:sodium symporter family transporter"
                     /protein_id="HDL5623106.1"
                     /translation="MLLTIITFLVVTGLVGYISWLKTRNDDLSTSKGYFLAGRGLSAT
                     VIGCSMVLTSLSTEQLIGVNANSYAGNFSIIAWTVPAVIPLCFLALYLLPKYIRNGYT
                     TIPEFFENRFDRQTRLIMSGLFLVFYLFIVIPTALYTGAIAFNKIFNLETAFGLSYGA
                     AITYTVIAIGIVGAIYAIFGGLKAVAVSDTWNAVLLVIGALLVPVFALIYLGNGSMAE
                     GVKIITTTHVEKWNAVGSATDAVPWPTIFTGIMVVHFFYWTTNQAIVQRALGARDLKA
                     GQKGILIAALFLLLLPLILNLPGLLSFHILGEGLKPIDVSYPELVNKTFPTVLQGFFI
                     AALFGAILSTFNSFLNSAATIYCKDLLPSISKKQFTDAELISYAKKVSAVMAVITMIF
                     GPLLMFGTDGIFLLTKRFAGFVNIPIVALFVIGLFNKTVSGKAARIALLAHVILYFCI
                     VWVFDVKINFVYVQAGLFVFDVALMLILGIFLKRATPYEDNKINHANVDLTSWEYAPL
                     AVASIVLGLFTLYAFLSPLGLASPDGNPAMVLAVYAVLQAVVCVVFFAKCKGKKAVN"
BASE COUNT         2024 a         1618 c         1531 g         1945 t
ORIGIN      
        1 acataaataa tctactttta gctcaaaaat aaaatgaaac tatcaagcga actacaaaat
       61 cagataaacc aactaaatca gttacgaaaa caggcactca aacaagagca agacgagcag
      121 aaattgtttg aaaaaaataa aattgaagat ttgccacatt ttggcacgca gcttaatgct
      181 cagaggaaac tattaggcat agaattaacc acccttgaaa tgcaaaccgg catttcaagc
      241 tctaccctaa aacgcttatt taaagaccca agccaagtga aatttcagac aatttgtatt
      301 gtggcagaaa cactcggctt taatttatgt gcaattaata ctcacaaaca agagtaagcg
      361 tgacaatgta gtgattttga ttactttggg aagacaaaaa atcgggctaa aagcccgatt
      421 tatcagagaa aagctataaa tccaataaag aaaggagttc gttatcttta cgatcgacat
      481 aatggtcgga ttgaatttta cgaatggttc tagatttgcc acgaataagt aaggtttcag
      541 tgctggcaat attgcctcta cgtttaatcc cttttaacaa ttcacctgaa gtaatgccgg
      601 ttgcaacaaa gacgatattg tcatcacgca ccaaatcttc taatttcaac accgtattca
      661 ccggtacatt catttcatta cagcgtaaaa gctctttttc ggtagcagtt aaattttccg
      721 ggctattccc cttcacttgg ttgcgaggaa ttaaacgtgc ttgcatatcg ccacccaatg
      781 cacgaaccgc agcccccgcc actacccctt caggtgctcc gccgatacca taaagcagat
      841 ccaattcgct ctctggcaaa cagcattgca ccgcagccgc aacatcgcca tcaggaatcg
      901 caatcactct tacccctaat ttttgcacat cggcaattat tttttcgtgg cgaggcttag
      961 caagatagca atggttaatt gggaaagtaa tttgcccttt ttcgaggcga cacggcgaag
     1021 attttgttca agcggaagat ttaaatcaat cattcctttg cattcctgcc ccaccactaa
     1081 tttttccata tacatatcag gggcttttaa aaaggtttct ttgccgcctg ctgctaatac
     1141 cgacaacgca tttgcctgcc ccattgcagt catacgagta ccgtcaatcg ggtcaaccgc
     1201 aatactgatt tcctcatctt ctaggcggga tagaccgatt ttctcgccaa tataaagcat
     1261 cggtgcttcg tcaatttcgc cctcaccaat taccacttcg ccacggattt ccatttggtt
     1321 cagcataaac cgcattgctt tcaccgcagc ttcatcagcg gcatttttat ccccacggcc
     1381 tagccaagag taagctgcta gagccgctgc ttccgtaaca cgagaaaatt caaaagaaag
     1441 agttcgtttc atttttgttc cttagtttct tgaaagaaaa actttaaaag aagagagatt
     1501 atattttatc agtaacctgc aagctacgtt actaaaaaat cagcgtttga ataaaaattc
     1561 acaaatagcc aaactttttt ataaaaataa agtcagattt agagtataat ctttacaagt
     1621 ttttatatta ttttagaggg aatttactat gtcattatcg gttttagacc aattagaaga
     1681 aaaaattaaa caagctgttg aaactattca attacttcaa ttagaagttg aagaattaaa
     1741 aggtaaaaac gatgcagcga aacaagaaaa cgacaccttg cgcagcgaat atgaacaatt
     1801 aaaagtggaa caacaaaact tccaagatcg tttacgttca cttttaggtc aaatcgacaa
     1861 cgtttaattc tattttcagc acaaacggct aaatttttag ccgtttttta tttgttacag
     1921 ctatggcaaa actctatttt tactactcct caatgaatgc aggcaaatct actactctgc
     1981 ttcaatcttc ttataattac caagaacgtg gaatgaacac tttagtttat accgccgcta
     2041 ttgatgaccg tttcggtgtg gggaaagtca actctcgtat cggtatttca caagaagcca
     2101 atttatttac cgctgatacc aatctatttg cggaaattaa ggcattacac tcaaacaaag
     2161 cgttacactg tatcttgatt gatgaggctc agtttttaac taaaacacag gtttatcaat
     2221 taagtgatgt ggtcgataaa ctcaaaattc cggtgctttg ctacgggcta cgcaccgatt
     2281 tccaagctga attatttgaa ggtagcaaat atttgttggc ttgggcagat gagctggaag
     2341 aactcaaaac catctgtgat tgtggcaaaa aagcccattt tgtcgttcga ttaaatgaaa
     2401 aaggcgaagc cattaaagac ggtgaacaaa tacaaatcgg cggcaatgat agatatctct
     2461 ctgtttgccg ttatcattac aaacaaaagt taggtaagct ataagctaca agaagcagca
     2521 agcggttaaa ttttcgggaa tttttgcaaa ttttcagcga aatttaaccg cttgtttgtg
     2581 ttatttacct ctctttactt tcctgcaaac cgaatttgct cactcatttg tctcatcaca
     2641 ctcgaagtct cggcaaaaaa ctgttggtaa gaggggcaaa ggtagttgtg gttttcgctg
     2701 tttgcttggg ggacgatgcg gtgtttgggg cagccgccgt ggcaaagtat gcggaatttg
     2761 cagtttaggc aggcttgcga gagttttgcc tgtttattct gcccgaattg gcgttgggcg
     2821 gctgatgaga cgatctctgc cagctgctgt tggttgaggt tgccgatgtg gtaatcggga
     2881 tagacgaaat ggtcgcaact gtacacatcg ccacaggctt ccaccaccag cgagctgcca
     2941 caggtcgggc ggaatacaca gttgttggag ggatagccaa gccattgccc gagcaggtta
     3001 tcaaactcga tcacaaaaat ctgcccacgg tcaggcagcc attcgtgaaa aacatccact
     3061 aaaaattgcc cgtagccttg gggcggaacg gaaaagggtt gtaattcccc cttgtggctt
     3121 tccaccaccg gaatgaactg catataacgg ctaccgaggg ctttgagggc ttgataggtt
     3181 tctctgcccc gttgccagtt gcggtcgttc accaccgtga gggtgttaaa ttccacgcca
     3241 acctctttca ataaatcgac cgcacttttc acccgttcaa aggtcggttt accgttggtg
     3301 gaaatgcggt agcggtcgtg aatgtcgctc agtccgtcaa tggataagcc caccagaaaa
     3361 tgattctctt tgaaaaagct cgcccactgg cggtttaggg caatgccgtt ggtttggatt
     3421 gcgttggtga tctgcttgcc gtttgcaaat ttttgttgat atttgaccgc ttgtttgtag
     3481 aaatctaagc ccagcagggt cggctcgccc ccctgccaca caaaatccac ccgttggctt
     3541 tggttggctt caatgtaatg acgaatgtag ttttgcagcg tttcatcgtt cataaactgc
     3601 gatttttctg gcggaatggt ctgttccttg ctcagataaa aacagtactc gcactgaata
     3661 ttacagtgaa aactgctggg ttttgccatt aggtggaagt aggtggtggt cattgtatct
     3721 ctaaattgta ggggcggact ttatgttcgc ccattgttta cattaatttt cgggcgggta
     3781 taaaacccgc ctctacaaac aattatatct catcaataat ccgatacacc caattttcca
     3841 gtgggtcgtt gaggcgtttc atttcctgtc gcatttcttc caacatctct tttttcacgg
     3901 cttggtaggc ttcgtcataa aagaggttgt gcatctcttc ggggtctttt ctgacatcgt
     3961 agagttcgca gcggtcggtg gcgttgaaga ccaatttgta atccttacgc cgccacattc
     4021 gctgttcaaa atagacaaaa tgccctgcca gttggcacaa caagcctttg cggtcgttgt
     4081 tttggctttg tctggttatc ggcagaatac tctcgccttg gaaagcggtc gggatcggtt
     4141 gatttgccac atcatacacg gtggaagtga gatcgtgcaa ataaacgagg ttgtcatcga
     4201 cttcgttcac ccttgtagag tgcggatctt taataatcag cggaatgttg taggtggttt
     4261 caaacataaa ctcgcctttt tcgatcatct tatgcgcccc catcgcatcg ccgtggtcgg
     4321 cggtagcaac gaggaaggta ttttcataga gattgttctc ttccaagaaa cggaacagct
     4381 cgccaatggc atcgtcaatc agcgtgatgt agccccagaa tttagaaatc acctctttcc
     4441 aacgatcttc gctcgcctcc cacattcccc acatttgtga aatggtgcgg aagtggttcg
     4501 gtttgccctc aagcggtttg aagaaactct cgtccaatac cacttggctt gggtcataca
     4561 ttgaataata cggctccggc actacacacg gagtgtgcgg cccccagaag ttgatccacg
     4621 caaagaacgg ttttttctca tcaagggagg cttgaatgta ttttttcgcc tcgtcaatga
     4681 taaaccactc tattgtctgc tcgcgactgc cggaaagcaa accacagagt tcctgcacac
     4741 gcaggtgtgg attgtcgcca aaataggctc gactgacttc gggtgcgtca tagccctttt
     4801 ccgccagcca ttcacgataa cggttggagt gtgttggcgg ctgattaaac acgaggtttt
     4861 tatacacttg gctgcccggg tagccatagc cgtcaaagtt atgaccggcg atgccataat
     4921 cttcgggaac ggattttgta ccaacgtgcc atttgccgat cacaaaggag ttatagccct
     4981 ccacgccggc aatattaggg ttttgttgtg gaatttcgcc tgtgccgcct ttttcgccgt
     5041 ttttgataat cccgtggctg gacggcatta agccggtaaa cagcgaggtg cgagccggcc
     5101 cgcagaccga agccggcgta aaggcgttgt taaaccgaat gccgtctttc gccaagcgat
     5161 ccaaattcgg ggtttttacc acctgatgcc cgtaagtgcc gagcatatct ttacgcactt
     5221 gatctaacaa aatatagatg atgttattca taatgacctc tttaaggctt gttaataacc
     5281 gataaattat caagtttcgg agatctgttc ccctctttag caaagagggg atttttgatc
     5341 tcgagccttt tccgttcttg gtatttttat actaatgagg agaaggctca cattcattta
     5401 attcaccgcc tttttgcctt tacattttgc aaaaaacacg acacaaacca ccgcttgtag
     5461 cacagcatac accgccagca ccattgccgg attgccgtct ggtgaggcta aaccgagcgg
     5521 agagaggaaa gcgtatagcg tgaataagcc caacacgata gaagccactg ccagtggggc
     5581 atattcccag ctggttaagt ccacattggc gtggttgatt ttgttgtctt cgtatggagt
     5641 cgcacgtttt aggaaaattc ctaaaatcag cattaacgcc acatcgaaca cgaacaagcc
     5701 agcttgcaca tacacgaagt tgatttttac atcaaacacc caaacgatgc agaagtagag
     5761 aataacgtgt gcgagtaagg caatgcgtgc ggctttgcct gagacggttt tgttgaataa
     5821 gccgatgaca aacagtgcca caatcggaat gttcacaaaa ccggcgaaac gtttggtcag
     5881 caagaaaata ccgtctgtgc cgaacatcag taacggccca aagatcatcg taatcaccgc
     5941 cattaccgca gagacttttt tcgcataact tatcagttcc gcatctgtga actgtttttt
     6001 gctgatagac ggcagtaagt ctttacagta aatggttgcc gctgagttta agaacgagtt
     6061 gaaggtactc aaaatcgccc cgaacagtgc ggcaataaag aagccttgta gcacggttgg
     6121 gaaagtttta ttcactaatt cagggtaaga cacatcaatc ggtttcaagc cctcacctaa
     6181 aatatggaaa ctgagtaagc ccggtaagtt taagataagc ggtagcaata ataagaacag
     6241 tgccgcaatt aagatccctt tttgaccggc ttttaagtct ctcgccccca aggcacgttg
     6301 cacaatggct tggttggtcg tccagtagaa gaaatgcacc accataatac cggtgaaaat
     6361 ggtcggccaa ggcactgcat cggtggcact acccaccgca ttccattttt caacgtgagt
     6421 agtggtgatg attttcaccc cttctgccat actgccatta cctaaataga taagtgcaaa
     6481 caccggcact aataatgccc caatgactaa caagaccgca ttccaagtgt ctgacaccgc
     6541 caccgctttt aagccaccga aaatggcata aatcgcccca acaataccaa tcgcaatcac
     6601 cgtataggta atcgctgccc catagcttaa gccgaaggca gtttcaaggt tgaagatttt
     6661 attgaaggca atcgcaccgg tgtaaagtgc agtcggaatg acgatgaaaa gatagaacac
     6721 caaaaacaag cccgacataa tcaaacgggt ttggcggtcg aaacggtttt caaagaactc
     6781 cggaatggtg gtataaccgt tgcggatata tttcggcaac agataaagtg ccaagaagca
     6841 aagcggaatt accgccggca cagtccacgc aataattgag aaattaccgg cataagagtt
     6901 ggcattcacg ccgataagtt gctcggtaga aagggaggtt aagaccatcg aacagccgat
     6961 aaccgtagca ctcaagccac gccctgccaa gaaataacct ttagatgtcg aaagatcgtc
     7021 gtttctggtt tttagccaag agatataccc gactaatcca gttacaacca gaaaggtaat
     7081 tattgttaat aacatattct tcacctcaat atgactat
//
LOCUS       DANLZQ010000117         6987 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.117, whole genome shotgun sequence.
ACCESSION   DANLZQ010000117 DANLZQ010000000
VERSION     DANLZQ010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6987)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6987)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6987
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.117"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(52..738)
                     /locus_tag="PXE50_002247"
     CDS             complement(52..738)
                     /locus_tag="PXE50_002247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5623107.1"
                     /translation="MDTLASRLKIVLDQKGLTQEKFAEQIGVSQPSVFKILNGQTRNP
                     TRIYEIANVLDVDVNWLKTGKGEAPDFAKIGKNPTAYEEESSMLRLEVLDVYASAGNG
                     SFVTGDLTAYTHAVEFENAYFAQVFQRANAKGLSIINVDGDSMEPTIGNGDLLFVDTT
                     KSAYQGDGVYVFSYGENLYVKRLQFAGDELLVISDNPLYKEWRITSENEHKFQIHGKV
                     EFMQGHIRRV"
     gene            862..1074
                     /locus_tag="PXE50_002248"
     CDS             862..1074
                     /locus_tag="PXE50_002248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5623108.1"
                     /translation="MTNKKIQKAIELVGTQTKLAEACGVSQPTVLKWLNGGGISAEYL
                     LKIEAATNGQVTIREICEELGNATAK"
     gene            1058..1342
                     /locus_tag="PXE50_002249"
     CDS             1058..1342
                     /locus_tag="PXE50_002249"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623109.1"
                     /translation="MQQQNKSPEQAGLASGKFTVRRNQDGKWRLDLTLLDFGISSPET
                     TQARCKLLQELQLALLQGQGHLNTVGVNVRKAGPVVCVGSLLSDLLNHQE"
     gene            1551..1823
                     /locus_tag="PXE50_002250"
     CDS             1551..1823
                     /locus_tag="PXE50_002250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623110.1"
                     /translation="MNLDHTCTNCKSKNLRVRTSEKIGLLTIQAVTYCNNCGTEQLVQ
                     SQIIRVRTPIYKERPEAMRINKCLMEADLNTPDLFDGVVADQPKQD"
     gene            1906..2238
                     /locus_tag="PXE50_002251"
     CDS             1906..2238
                     /locus_tag="PXE50_002251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623111.1"
                     /translation="MSKQLYYRHKSRWNRLNRLKKMNKRRLNLFLQEKRVANLESRLA
                     DEVELAKLNSEQIGDLLQALELKVNRLIRQNEKLKARVIKLEKVKQTQKQGLFAMFKK
                     VLGSKGNP"
     gene            2251..2544
                     /locus_tag="PXE50_002252"
     CDS             2251..2544
                     /locus_tag="PXE50_002252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623112.1"
                     /translation="MDFVATYQKIRINTNHKQFTCNHLGEIWGKENDDFKRFLLRVAF
                     LQDNPEPKPWGAYSPQEKRLLHSFSLWLEQIADFQRVMKRESKLREKHINAPD"
     gene            2696..2938
                     /locus_tag="PXE50_002253"
     CDS             2696..2938
                     /locus_tag="PXE50_002253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623113.1"
                     /translation="MSLITVNDYKIKKDILDADGKPCYQLYQGEELLRDTTNLSEIIA
                     YMFIRAEDKPFDELYNHIINQEAGAKTDIKFTVTVR"
     gene            2935..3267
                     /locus_tag="PXE50_002254"
     CDS             2935..3267
                     /locus_tag="PXE50_002254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623114.1"
                     /translation="MSQITKSAYTHIHPNWQAPRGNTYRIERYELKRRYALFCNGERV
                     VLYKDPTHPNKNVESHIESDVLLLWLLKNELGWSGNIKEPLSPQDVENIRLLEQAFCL
                     TYNGTFIK"
     gene            3264..5624
                     /locus_tag="PXE50_002255"
     CDS             3264..5624
                     /locus_tag="PXE50_002255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication endonuclease"
                     /protein_id="HDL5623115.1"
                     /translation="MNYQNEILSATEAFAIGVSLPPVAGASACALELHSDRLYQAFKQ
                     PYTSMVQQELFSKDPIHEPLRQSYFERLPRALAEHFGRQYKQKLHYQSQYDTADWFKA
                     EMARKMPRIEAVISQYCDVFDFLKQSHQDLDFLAELDSNVYFGAGVDTQQAVQKIKQD
                     AEVKGIQLPMHLCRLENSSRYLKAHGIRPLAYQTEEQIKQLALGIAYRVRQIQQDNIE
                     QNMHKATDGDTAYSVLLECYRAMMGEVNKLKIDSPYQKKARKGRLTEEEITTGFLKMT
                     CEKWWTRKLSKIAEQMKEHLAIACGMVNMLSPYCSNARLKAFEAQRKANIDYLKSMII
                     ANIAEPEEQLSLFETWLKSASNPKIKRLELLTRMNGFERYADKQGHEGWFITLTAPSK
                     YHAMLSRTSSVNPKWNGASPAETQVYLVNTWAKIRAKLNREGVMAYGFRVAEPHADAT
                     PHWHLILFTRPEDMEKLRRVFLSYALEVDGTEAGAKKYRCKFKRIEKEKGSATGYLVK
                     YVSKNIDGFGMDGELSDEANIQAKENAARVGAWSSVWCIRQFQQLGNIPISLWRELRR
                     LGSVEQEDETLEKLRVIADSGEWDVFTEELGGALVKRADLVARITYTERKSETGEALY
                     TMYQEPSLKVSGIINIKNGVQINTRPKEWSIQLKPKNWEEQQLQKKLENATETERAEV
                     KRKYYEKLGFNEEAIALLGELAPPWTCVSNCTGSKNNQISEEARNCLRNELITMRGRV
                     TEHQIDDLLNGKRLKIWGNSQKTMFVSYSRGRLIEHIVDNYESFLN"
     gene            5637..5969
                     /locus_tag="PXE50_002256"
     CDS             5637..5969
                     /locus_tag="PXE50_002256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623116.1"
                     /translation="MVKFIRLNLINYFIEKDEYGEPVRCRAFRYDEIIQTKFIEGFRE
                     GEIPADDYGFEDWNGSVLILNEEGRKYFENYLFDVKKNYCRARDNYVYVLETLDEIEM
                     KLGLLEAK"
     gene            5969..6421
                     /gene="ssb"
                     /locus_tag="PXE50_002257"
     CDS             5969..6421
                     /gene="ssb"
                     /locus_tag="PXE50_002257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDL5623117.1"
                     /translation="MNLVTLVGRLGQDPDIRTMQNGEKAAALSVATSEKWTDKQTGVK
                     KESTEWHRVVLYRRLAEIAELYVKKGHLVSIIGKIKTRKWTDSNGVERSITEIIAEQM
                     QMLSSGEKNTPNTPNKAENKPQPKQKNQDVMTADEQKDIPQFDDDIPF"
     gene            6432..6764
                     /locus_tag="PXE50_002258"
     CDS             6432..6764
                     /locus_tag="PXE50_002258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623118.1"
                     /translation="MREWEKQMPFSANLHIRPTGKFEVKNVNIEQIIGERGKNYGNFD
                     DVATMSQQLKAVLLDTNTQLKPHQKEAGEMICLKLARIFAGCNPDYEDNWRDIAGYAV
                     LGGKLNEK"
     gene            6754..>6987
                     /locus_tag="PXE50_002259"
     CDS             6754..>6987
                     /locus_tag="PXE50_002259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623119.1"
                     /translation="MKNKMGSKFIRVRVEHPQRKKEDIELVQDVVAYHIFNLFKFEES
                     GLRGFSQYDLEIDVKVKPVLEQKEMPVDVWIDDL"
BASE COUNT         2261 a         1195 c         1608 g         1923 t
ORIGIN      
        1 tttatgtgat gtaatataga caagatgagt tagattttga tgttccatca cctaaaccct
       61 cctaatatgc ccttgcataa attccacttt accgtgaatt tggaatttat gctcattttc
      121 tgatgtgatt ctccactctt tataaagcgg attgtcggaa atgactaaca attcatcacc
      181 ggcgaactgc aagcgtttta catataagtt ttcgccatag ctgaaaacat agacaccatc
      241 gccttgataa gcggatttag tggtatctac gaacagcaaa tcaccgttac cgatagttgg
      301 ctccattgag tcgccatcta cattaataat tgataagcct ttggcatttg cacgttgaaa
      361 gacttgtgca aaataggcat tttcaaattc tactgcgtgc gtgtaagcgg ttaagtctcc
      421 cgtgacaaaa ctaccattgc cggcagaggc atatacatct aacacctcaa gtcgaagcat
      481 tgagctttcc tcttcataag cggtcggatt ttttccgatt ttcgcaaaat ctggtgcttc
      541 gcctttgccg gttttgagcc aatttacatc gacatctagg acgtttgcaa tttcataaat
      601 ccttgtggga tttcgagttt gtccattcag gattttaaaa acagatggct gtgaaacacc
      661 tatttgttct gcaaattttt cctgtgttaa acctttttgg tctaaaacga ttttcaaacg
      721 acttgccaaa gtatccatta ggaactcctt atttttgatg agtatataac taaaggtata
      781 gaaataaaaa ttcatttggt tattgatttt ttatttcttt ggttatatta ttataaccat
      841 tcaataacca gagttatatt tatgactaat aagaaaattc agaaagctat tgaacttgta
      901 ggaacacaaa caaaattagc tgaagcttgt ggagttagtc agcctacggt cttgaaatgg
      961 ctaaacggag gcggaatttc cgctgaatat ctactaaaaa tcgaagctgc cacaaacggg
     1021 caggtaacaa ttcgtgaaat ttgtgaggag ttgggaaatg caacagcaaa ataaaagccc
     1081 tgaacaggca gggctagcga gtgggaaatt tactgtaaga cgtaatcaag acggtaaatg
     1141 gcgtttagat ttgaccttgt tggattttgg tattagttcg ccagaaacga ctcaagctcg
     1201 ttgcaaattg cttcaagagc ttcagcttgc tcttcttcaa ggtcaaggtc atttaaatac
     1261 tgtcggcgtg aacgttcgaa aagccggtcc agtcgtttgc gttggtagtc tgttaagcga
     1321 ccttttaaat catcaagaat aatgtttttg gcgtttagtt gatggcgtaa gttttcaact
     1381 tcaacagtca gttcaataat ttgatcttca gtattcataa aatttccttt tggagggtta
     1441 aacaatatct aaaacataac caaaattcga ctgcttgtct atggggatag ataagccgaa
     1501 atcaacgtaa agaatgttaa tagagccttg gggaaggcgt aggggaaata atgaatttag
     1561 accacacctg tacaaattgc aaaagtaaaa atttacgggt tcgtacatct gaaaaaatcg
     1621 gtttgctgac tattcaggct gttacttatt gtaataactg cggcacagag caacttgtgc
     1681 aaagtcaaat tatccgtgtt cgcacaccga tttataaaga gcgaccggaa gcaatgcgta
     1741 ttaataaatg cttgatggaa gccgatttga acacgccgga tttgttcgat ggcgttgtgg
     1801 cagaccaacc taagcaagac taatcccaat ttttaaacaa tcgtcaaaat aagccttatt
     1861 tgcatagggc gagatttttg caccctaaat tcaggaattt gaacaatgag taagcaatta
     1921 tattaccgac acaaatcacg ttggaacaga cttaaccgcc ttaagaagat gaataaacgt
     1981 cgccttaatc tgtttttgca agaaaagcgg gtggcgaatt tagaaagccg gttagctgat
     2041 gaagtagagc tggcaaagct gaatagtgag cagattggcg atttactgca agcgttggag
     2101 ttaaaagtga atcggttaat tcgccaaaat gaaaagctga aagcccgtgt gattaagctg
     2161 gaaaaagtca aacagaccca aaagcaaggt ttgtttgcaa tgtttaaaaa ggtgttgggt
     2221 agcaagggta atccttagta agaggtagat atggatttcg tggcaacgta tcaaaagata
     2281 cgcattaaca ctaatcacaa gcaatttact tgcaatcact taggcgagat ttgggggaag
     2341 gaaaacgacg attttaaacg tttcttacta cgagtcgcat tcttgcagga taaccccgag
     2401 ccgaaacctt ggggagcgta ttccccacaa gaaaaacgcc ttttacatag ttttagcttg
     2461 tggttagagc agatagcaga ttttcagcga gtaatgaaaa gagaatcaaa actgcgtgaa
     2521 aaacatatta acgcaccgga ttagaaggag taaatatgag ccgtaaccgt gaattgtgtg
     2581 agttttttca caaactgtgg tgcaaaaccg gtaatcgcta tgcttatcgc cggtatcaag
     2641 tgttttttca gcgttatcaa aacgaatgtt tagtgaatga gtagagggta gaaaaatgtc
     2701 attaattact gtgaacgatt acaaaatcaa gaaagatatt ttagatgcag acggcaagcc
     2761 gtgttatcag ttgtatcaag gcgaagagct attgcgtgat accaccaatt taagcgaaat
     2821 catcgcttat atgtttattc gtgccgaaga taaaccgttt gatgagttgt ataaccatat
     2881 catcaaccaa gaagcaggag ctaaaacaga tattaaattt acggtaacgg tgagatgagc
     2941 cagattacta aatccgctta cacacatatt cacccaaact ggcaagcccc gagaggtaac
     3001 acttaccgga ttgagcgata tgagctaaaa cggcggtatg ccttattttg taatggtgag
     3061 agggtagttt tatataaaga cccaacacac cccaataaga acgtagagag ccatatagaa
     3121 agtgatgttt tgttgttatg gctactgaaa aatgaattag ggtggagcgg taatattaaa
     3181 gagccgttaa gccctcaaga tgttgagaat atccgcttgt tagagcaagc attttgttta
     3241 acttataacg gaactttcat taaatgaatt atcagaatga gattctatct gctacagagg
     3301 ctttcgcaat aggtgtttca ctcccacctg ttgccggtgc ttctgcttgt gcattagagc
     3361 ttcattctga tcgtttatat caagcgttca aacagcctta cacttcaatg gtccagcaag
     3421 aattattctc gaaagaccct attcacgaac cgttacgcca atcttatttt gagcgtttgc
     3481 ctcgtgcctt agcagagcat ttcggcagac agtataagca aaagctacat taccaaagcc
     3541 aatacgacac agcagactgg ttcaaagcgg aaatggcacg caaaatgcca cgcattgagg
     3601 cagttattag ccagtattgc gatgtattcg attttctgaa gcaatcccat caagatttag
     3661 attttttagc tgaattagat agtaatgttt atttcggtgc cggtgttgat acgcaacaag
     3721 cggtacaaaa aattaaacaa gatgccgaag tgaaaggtat tcaactgcct atgcaccttt
     3781 gccgtttaga gaatagctct cgctatttaa aagctcacgg cattcgcccg cttgcttacc
     3841 aaaccgaaga gcaaatcaaa cagcttgcct taggtattgc ttatcgtgtt cgccaaattc
     3901 agcaagataa catcgagcag aatatgcaca aagcgacaga tggcgacaca gcctatagtg
     3961 tgttgcttga atgctatcgg gcaatgatgg gagaggtaaa taagctcaag attgattcgc
     4021 cttatcagaa aaaagcgaga aagggtagat taactgaaga ggaaattacc acaggctttt
     4081 taaaaatgac ctgtgaaaaa tggtggacta gaaagttatc taaaattgcc gaacagatga
     4141 aagagcattt agctattgcg tgcggtatgg tgaatatgct ttcgccttac tgttcaaatg
     4201 ctcgcttgaa agcgtttgag gctcaacgca aggcgaatat tgattatttg aaatcaatga
     4261 tcattgccaa tatcgccgag ccggaagagc aactttcatt atttgaaacg tggttgaagt
     4321 ctgcctctaa cccgaaaatt aaacgccttg aattactcac tcgtatgaat ggatttgagc
     4381 gttatgcaga taagcaaggg cacgaggggt ggtttattac cttgactgct ccgtctaagt
     4441 atcacgcaat gctttcaaga accagtagcg tgaacccgaa atggaatgga gcaagccctg
     4501 cggaaacaca ggtttacctt gtgaatactt gggcgaaaat ccgtgccaaa ctcaaccgtg
     4561 agggcgtaat ggcttacggt tttcgagtgg ctgaacctca cgctgacgct accccacact
     4621 ggcatttaat tctattcact cgtccggaag atatggaaaa gcttcgccgc gtgttcttga
     4681 gttatgcctt agaggtcgat ggcacagaag ccggtgcgaa aaaataccgt tgcaaattca
     4741 agcgtattga gaaagagaaa ggctcggcaa cgggctattt agtgaaatat gtttctaaaa
     4801 acattgacgg ttttggaatg gacggcgagc tttcagacga ggcaaatatt caggcgaaag
     4861 agaatgccgc tcgtgtagga gcgtggtcta gcgtttggtg tattcgacag ttccagcagt
     4921 taggtaatat tccgatcagc ttatggcgtg agttacgccg tttggggagt gtagagcaag
     4981 aagatgaaac tttagagaaa ctccgtgtga ttgcagatag cggtgagtgg gacgttttca
     5041 ccgaagaatt aggcggtgcg ttggttaaac gtgccgattt agttgcacgt attacttata
     5101 ccgaacgcaa aagcgaaacc ggtgaggcgt tatatacgat gtatcaagag ccatcattaa
     5161 aagtgagcgg cattattaac attaaaaacg gtgtgcagat taatacacgc ccgaaagagt
     5221 ggagcattca acttaaacct aaaaactggg aggagcaaca attacagaaa aaattagaaa
     5281 atgcaaccga aacggaacga gcggaggtta aacgtaaata ctacgagaag ttagggttta
     5341 acgaagaggc tatcgcttta ttaggggagc ttgctccccc ttggacttgt gtcagtaact
     5401 gtacggggtc aaaaaataat cagattagtg aagaggctcg aaattgccta agaaatgaac
     5461 tgattacaat gcgaggacgg gttactgaac atcaaataga cgatttacta aacggcaagc
     5521 ggttaaaaat ttggggaaat tcgcaaaaaa caatgtttgt gagttatagc cgtgggcgtt
     5581 taattgagca tattgttgat aattatgaga gttttttgaa ttaggatatt aagaaaatgg
     5641 ttaaatttat tcgtttaaat ttgattaatt atttcattga gaaagatgaa tatggagaac
     5701 cggtgcgttg cagagcgttt cgttatgatg agattattca aactaagttt attgaaggat
     5761 ttcgagaggg agagatacca gctgatgatt atggatttga agattggaat ggttcggttc
     5821 tgattttaaa tgaagaagga cgtaaatatt ttgagaacta tctttttgat gtaaagaaga
     5881 attattgtag agcaagggat aactatgtat atgtcttgga aactttagac gaaattgaaa
     5941 tgaagttagg attattggag gcgaaataat gaacttagtc acattagtcg gacgtttggg
     6001 gcaagaccct gatattagaa caatgcaaaa tggtgagaaa gctgcggctt tatcggtagc
     6061 gacctctgaa aagtggacag ataagcaaac aggtgtgaag aaagaaagca ccgaatggca
     6121 tagggtggtg ctttatcgcc gattagctga aatcgccgaa ttgtatgtaa aaaaagggca
     6181 tttggtatca attatcggga aaattaaaac ccgaaaatgg acggatagca acggtgttga
     6241 gcggagtatt acagagatta ttgccgagca gatgcaaatg ctcagtagtg gtgagaaaaa
     6301 tacgccaaat acgccaaata aggcagaaaa taaaccgcaa ccaaagcaga aaaatcaaga
     6361 cgtgatgact gcggacgagc agaaagatat tccgcagttt gatgatgata ttccgtttta
     6421 gggggtgaat aatgagagaa tgggaaaaac aaatgccatt tagtgcaaat ttacatataa
     6481 gacctacagg aaaatttgaa gtgaaaaatg taaacataga acaaataatc ggagaacgtg
     6541 gcaaaaatta cggcaacttt gatgatgttg ccacaatgag ccagcagtta aaagcagtgt
     6601 tgctggatac caatactcaa cttaaaccac atcaaaaaga ggcaggcgag atgatctgct
     6661 tgaaactggc tcgcattttt gcaggttgta atccggacta tgaagataac tggcgagata
     6721 ttgcgggtta tgcggtgctg ggagggaaat taaatgaaaa ataaaatggg gagtaaattt
     6781 atacgagtca gagttgagca tccacagcgg aaaaaagaag atattgagct tgtgcaggat
     6841 gtggttgctt atcatatttt taatcttttt aaatttgagg aaagtgggtt acgggggttt
     6901 agtcagtatg atttggaaat tgatgtgaaa gttaagccag tgttagaaca aaaagaaatg
     6961 cctgtagatg tttggattga tgattta
//
LOCUS       DANLZQ010000118         6979 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.118, whole genome shotgun sequence.
ACCESSION   DANLZQ010000118 DANLZQ010000000
VERSION     DANLZQ010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6979)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6979)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6979
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.118"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(5..916)
                     /locus_tag="PXE50_002260"
     CDS             complement(5..916)
                     /locus_tag="PXE50_002260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RimK family alpha-L-glutamate ligase"
                     /protein_id="HDL5623120.1"
                     /translation="MKWLMLCREPRLYSCCRIKAACEAKGIELDILDQNRMLLGLENG
                     EFKIYYQAGESYDNNRPEPVLLPNYDGILPRFGTGSTEMGCSVLRHFEAKGIPVLNHS
                     AAFALARDKWRTLQKLAKHNLPVPNTNFAGHLVSVKSQLNQFAFPLISKVLNGSQGNG
                     VMLFEGKNNAEAVLATFRQVNEPYLCQQFVGDAKGQDIRAFVIGNEVVAAMSRTSVTG
                     DFRANIHQGGTAQPIELTQMERALAIKATKTIGLDIAGVDFLRTEKGVVILEVNASPG
                     FEGIERVNDVDIASEMVSYFINKMKNA"
     gene            complement(913..1632)
                     /gene="nfsA"
                     /locus_tag="PXE50_002261"
     CDS             complement(913..1632)
                     /gene="nfsA"
                     /locus_tag="PXE50_002261"
                     /EC_number="1.5.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-insensitive NADPH nitroreductase"
                     /protein_id="HDL5623121.1"
                     /translation="MQSKPTLETILSHRSIRKFTEQPISEEIFQILIEAGKAASSSNH
                     LQCVTVIRVTDRQIRETLKAVSGMQYVVDCAEFLVFCIDFNKHKQLVPESQLEWAEVS
                     LIGAVDTGILAQNVFLAAESLGLGAVYIGALRNDIERVSKALNLPEYCVPLVGMCLGY
                     PAQEPAIKPRLPNSLVCYNNQYQDFDWTEFAKYNENLTAYYQARIGEPQQWQAAIHKT
                     LDKPVRPHILPFFNQKGLLKK"
     gene            complement(1644..2429)
                     /gene="mtgA"
                     /locus_tag="PXE50_002262"
     CDS             complement(1644..2429)
                     /gene="mtgA"
                     /locus_tag="PXE50_002262"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HDL5623122.1"
                     /translation="MEQSMAKRNKRFLSSLLKKIGLFFIPRKIKSKLGWLWFGSSRLL
                     TFGGTFFLIPILIFSVLPVPYSAYMVQKKVENLVQGKSYPIKKEWVSLNEISWQMQMA
                     VIASEDQKFESHFGIDLQAIETALKLNAKSKKVRGGSTISQQTVKNMFLWHGQSWLRK
                     GIEVPLTLLVENVWSKDRILEVYLNIAEFGNGIFGVEAAAKHFFKKSAKQLTLQESAL
                     LAASLPNPLVFRVDKPGPSMRKRQAWIMRQVSLLDGKNYLDKL"
     gene            complement(2404..2724)
                     /gene="trpR"
                     /locus_tag="PXE50_002263"
     CDS             complement(2404..2724)
                     /gene="trpR"
                     /locus_tag="PXE50_002263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trp operon repressor"
                     /protein_id="HDL5623123.1"
                     /translation="MKTLYNQRDPNEWTQFLALLEQAVAEDKLEPFFSMFLTADERGS
                     LGLRLQIVQALLKGEDSQREIQQNLNTSAATITRGSNMLKTLDQDFLQWLNGKVNGTV
                     NGKA"
     gene            complement(2804..3445)
                     /gene="lolA"
                     /locus_tag="PXE50_002264"
     CDS             complement(2804..3445)
                     /gene="lolA"
                     /locus_tag="PXE50_002264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HDL5623124.1"
                     /translation="MKTLFKKSVFGLALFGLANVALADAQSVAELQRRLEQVSQYSAD
                     FDQTVRSSKGKQIQQGKGKFQVKRPNLFRMDTKSPQENLIVSDGKDLWFYDPFVSQVT
                     VNTVQDAVNNTPFVLLTSGDKSHWDQYDVSQSADTFVLKPKSKKSNLKQFDVRIDQSG
                     LLKGFSTIERDGQSNLYVLRNITTGGVSSDLFKFSVPKGAELDDQRGGKKSKK"
     gene            complement(3556..6414)
                     /gene="polA"
                     /locus_tag="PXE50_002265"
     CDS             complement(3556..6414)
                     /gene="polA"
                     /locus_tag="PXE50_002265"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005611716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HDL5623125.1"
                     /translation="MATIAKNPLVLVDGSSYLYRAFHAFPPLTNRLGEPTGAMYGVLN
                     MLKSLISQVNPSHIAVVFDAKGKTFRDELFKQYKSHRPPMPDDLRPQIEPLHRIIKAL
                     GIPLISIEGVEADDVIGTLAVQAAKDGKDVLISTGDKDMAQLVNDHIMLINTMNNTLL
                     DREGVIEKYGIPPELIIDFLALMGDSADNIPGVKGVGEKTALALLQGIGSLEQIYANL
                     DQIATLSFRGAKNFAPKLEAEKANADLSYLLATIKTDVELDVTHDQLLTQPQDRAELA
                     QLFEHYEFKRWLNEVNQNANPVTQTSAEKVPNNYQVTQAVRNEENVANVVEIDRSKYE
                     TVDTEQKLSAWIEKLTAARLIAVDTETDSLDAMSANLVGISFALENGEACYIPLGHKQ
                     KAQPQQADMFGDEERSESPSSDELVKNQLNLTACLSKLKPILLNPEIKKIGQNIKYDL
                     TIFANYGIELQGVAFDTMIESYTQNSTGRHNMDDLAARYLGHKTIPFEELAGKGKNQL
                     TFDKIEIAKAAEYAAEDADVTMKLHQVLWEKLQQEPELVKLFDEIEMPLVGVLSRIER
                     NGVLIDPKKLLTQSAEIEKRLEEVETLVHAEAGQTFNLASTKQLQEILFEKLGLPVLK
                     KTPKGAPSTNEEVLDELAQQGHLVPKLLMEHRGLSKLKSTYTDKLPQLINKKTGRVHT
                     SYNQAVTATGRLSSSDPNLQNIPIRNEEGRRIRQAFVAREGYKIVAADYSQIELRIMA
                     HLSNDEGMINAFAEGKDIHRATAAEIFGVELGEVTSEQRRSAKAINFGLIYGMSSFGL
                     SNQLGIGRAEAQKYMDLYFQRYPAVQQFMTDIREVAVEKGYVETLFGRRLYLPDIKSG
                     NAILRKAAERVAINAPMQGTAADIIKVAMIGIDNAIRDNDEIKMIMQVHDELVFEVKA
                     DKIDHYSQLIKTEMEKAISLKVPLIAEVGVGENWDEAH"
     gene            complement(6699..>6979)
                     /locus_tag="PXE50_002266"
     CDS             complement(6699..>6979)
                     /locus_tag="PXE50_002266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623126.1"
                     /translation="KILNPMYSTIASYSTQDDGSLNAKYVVGTGDDTDGEVTNFVIIT
                     SEYKYIDAQSAKAITDAPLTKEDIGKTPTQIMLGRIYKYLKETGQIVV"
BASE COUNT         1909 a         1598 c         1313 g         2159 t
ORIGIN      
        1 caaatcaagc attcttcatc ttattgataa aataagaaac catttcagaa gctatatcaa
       61 catcatttac tctctctatg ccttcaaatc ctgggctggc attgacttct aaaataacta
      121 cgcctttctc tgtccgcaga aaatcaacgc ctgcaatatc aagccctatc gttttagttg
      181 ctttaattgc taacgcacgt tccatctgag ttaattcaat cggttgagcc gttccacctt
      241 gatgaatatt ggctctaaaa tcgcctgtta cgctggttcg gctcatggca gcaaccactt
      301 cattgccaat cacaaacgcc cgaatatctt gccctttagc gtcgcccaca aattgttggc
      361 atagataagg ctcatttact tgcctaaagg tcgctaacac ggcctcggca ttatttttgc
      421 cttcaaatag cattacgcca ttcccctgtg aaccatttag cacttttgaa ataagtggaa
      481 aagcaaattg attgagttgt gatttcacag aaaccaaatg ccctgcaaaa ttcgtattag
      541 gaaccggcaa attgtgtttg gctaattttt gtaatgttcg ccatttgtct cgggctaacg
      601 caaatgccgc tgaatgattt agaacaggaa tacctttcgc ctcaaaatgg cgtaacaccg
      661 aacagcccat ttcggtactg cctgtgccaa aacggggtaa aatgccgtca taattcggca
      721 acaataccgg ctccggacgg ttgttatcat agctctcgcc agcttgatag tagatcttaa
      781 attcgccatt ttctaacccg agtagcattc tattctggtc taaaatatcc agctcaatcc
      841 cctttgcctc acaagcggct tttattcgac agcagctata taaacgaggc tctcgacata
      901 gcattagcca cttcattttt tcagcaatcc tttctgattg aaaaacggca aaatatgcgg
      961 acgaacaggc ttatccaatg ttttatgaat agctgcttgc cattgttgtg gctcgccgat
     1021 tctggcttgg tagtaagcgg tcaaattttc attatatttt gcaaattcag tccaatcaaa
     1081 atcctgatat tgattgttat aacaaaccaa actattcggc aaacgaggtt ttattgccgg
     1141 ctcttgtgcc ggatacccca aacacatacc caccagtgga acacaatatt ccggcaagtt
     1201 aagggcttta gaaacccgct caatatcatt acgcaatgct ccaatataca ccgctcccag
     1261 ccctagtgat tcggcggcta aaaatacatt ctgggccaaa ataccggtat ctaccgcccc
     1321 aatcaacgac acctccgccc attccaactg cgattcaggg acaagttgtt tgtgtttatt
     1381 aaaatcaatg cagaacacca aaaattcagc acaatctact acatattgca tacctgaaac
     1441 ggcttttaat gtttctcgaa tctgccgatc ggttacacga atcaccgtca cacattgcag
     1501 atgatttgaa cttgaagccg ctttacctgc ctcaattaag atttggaaaa tctcttcaga
     1561 aataggctgt tcggtaaatt tacgaataga acggtgagat aaaatcgtct caagagtcgg
     1621 tttactttgc atatttttct cgtctaaagt ttatctaaat aatttttgcc atcaagcaaa
     1681 cttacttgtc gcataatcca cgcttggcgt tttcgcatac tcgggccggg tttatctacc
     1741 ctaaacacca acgggttagg caaagaggct gccaatagtg cggattcttg caaggttagc
     1801 tgtttggctg attttttgaa aaaatgcttt gcggctgctt ccaccccgaa aatgccgtta
     1861 ccaaattccg caatattgag gtacacctct aaaatccgat ccttactcca cacattttcg
     1921 actaacaggg ttaaaggcac ttcaatccct ttgcgtaacc agctttgccc gtgccacaaa
     1981 aacatatttt ttaccgtttg ttgcgaaatg gttgaacctc cacgcacttt tttggattta
     2041 gcattcagtt tcaaggcagt ttctatcgct tgtaagtcaa tgccaaaatg gctttcaaac
     2101 ttttgatctt ctgaggcaat cacagccatt tgcatttgcc acgaaatctc attcaggctc
     2161 acccattctt ttttgatcgg gtaagatttc ccctgaacca gattctccac ctttttttgc
     2221 accatatacg cagaataagg caccggtaac accgaaaaaa tcagtatcgg aatcaggaaa
     2281 aatgtgccac caaaggttaa taagcgacta gaaccaaacc aaagccagcc cagtttactt
     2341 tttattttgc gaggaataaa aaaaagccct attttcttca aaagagagct taaaaatcgc
     2401 ttgttacgct ttgccattga ctgttccatt aaccttgccg ttcagccatt gcagaaaatc
     2461 ttggtcgagt gttttaagca tatttgaacc acgagtgatg gttgccgcac tggtatttaa
     2521 attttgttgg atttcccgtt gcgaatcttc accttttagc aaagcttgca caatttgtaa
     2581 acgcaagcct aatgaacctc gctcatcggc ggtgagaaac attgagaaaa acggctcaag
     2641 tttatcttcc gcaaccgctt gttcaagcag agccaaaaac tgcgtccact cgtttggatc
     2701 tcgctggtta tagagtgttt tcatactgtc ccttgaagta aaaacggtga caagcggtca
     2761 gatttttaca aaattttgca gaaaaacgac cgcttgctct ccattatttt ttcgattttt
     2821 taccgccacg ttggtcgtct aactctgccc ctttcggtac gctgaattta aacaaatcgc
     2881 ttgagacacc gccggtagta atattgcgta acacatataa gttactttgc ccgtcacgct
     2941 caatggtact gaaacctttt aataaaccgc tttggtcaat ccgcacatca aactgtttta
     3001 aattgctttt tttcgatttt ggcttaagca cgaaagtatc agcactctgg ctgacatcat
     3061 attgatccca gtggctttta tcaccgctgg ttaataagac gaatggcgta ttattaactg
     3121 catcttgcac ggtatttacc gtaacttgtg aaacgaaagg atcgtaaaac cataaatctt
     3181 tgccgtcaga tacaatcaaa ttttcttgtg gtgatttggt atccattcta aataagttcg
     3241 ggcgttttac ttggaatttg cctttgcctt gctgaatttg tttacctttg ctagaacgca
     3301 cggtttggtc gaaatccgca ctatattggc ttacttgttc caaacggcgt tgtaattctg
     3361 caacagattg agcatcagcc aatgccacat ttgccaagcc aaataacgct aaaccgaata
     3421 ccgatttttt aaataatgtt ttcatttgtt ttccttttta ccaacaagaa ttttcttgtt
     3481 tgacaataaa atcatcaaaa gtttcatatt aatgaactgt tacaacaata caataaaagt
     3541 cgtgaattgt atagtttaat gagcttcgtc ccagttttcg cctacgccaa cttcggcaat
     3601 cagtggcact ttgaggctaa tcgctttttc catttcggtt ttgattaatt ggctgtaatg
     3661 gtcgatttta tcggctttga cttcaaacac caattcatcg tgaacctgca taatcatttt
     3721 gatttcatca ttatcacgaa tcgcattatc aataccaatc atcgccacct taataatatc
     3781 ggcagccgtg ccttgcattg gggcgttgat tgccacccgt tctgctgctt tacgcaaaat
     3841 agcattgccg gatttaatat caggcaagta caaacggcga ccaaataggg tttcaacata
     3901 gcctttttca actgcaactt cacgaatatc ggtcataaat tgttgaaccg ccgggtaacg
     3961 ttggaagtag agatccatat atttttgagc ctctgcacgc ccaatcccta attggtttga
     4021 aagcccaaat gacgacattc cgtaaatcag cccgaagtta attgctttcg cactgcggcg
     4081 ttgttcggag gtgacttcac ctaactccac cccgaaaatt tcggcagcgg tagcacggtg
     4141 aatatctttg ccctccgcaa aggcgttaat cattccctca tcattcgata aatgagccat
     4201 aatccgtagc tcaatttgtg aatagtcggc agcgacaatt ttataacctt ctctcgcgac
     4261 aaaagcttgg cgaatccgtc tgccctcttc attgcggatc ggaatgttct gcaaattcgg
     4321 atcgctggaa gaaaggcgtc cggttgcggt gactgcttga ttgtaagagg tatgcacccg
     4381 ccctgttttt ttgttaatca gttgtggtaa tttatcggtg taggtagatt tcaacttact
     4441 taacccacga tgctccatta ataacttcgg cactaaatgc ccttgttgag ccaactcgtc
     4501 taacacttct tcgttggttg agggtgcacc ttttggagtt ttcttcaaca ccggcaagcc
     4561 taatttttca aacaaaatct cttgtaattg tttagttgag gcaagattga aggtttgccc
     4621 tgcttctgcg tgtactaatg tttcaacttc ctccaaacgt ttttcaattt cagccgattg
     4681 ggtcaataat tttttcgggt caatcaacac gccattgcgt tcaattcgag aaagtacgcc
     4741 cacaagtggc atttcaattt catcgaataa cttcaccaat tcaggctctt gctgtagttt
     4801 ttcccacaat acttggtgga gtttcatcgt cacatcggca tcttctgccg catattcagc
     4861 cgcttttgct atctcgattt tatcgaaggt cagttgattt ttccccttac cagcaagctc
     4921 ttcaaacgga atcgttttat gccccaaata acgggcggct aaatcgtcca tattatgacg
     4981 accggtgctg ttttgggtgt aagattcaat catcgtatca aaagcaacac cttgtagctc
     5041 aatgccgtag ttcgcaaaaa tggttaaatc atatttaata ttctgcccga tctttttaat
     5101 ctccgggtta agcaaaatcg gcttgagttt acttaaacaa gcggtcaaat ttagctgatt
     5161 ttttaccaat tcatcggaag acgggctttc tgaacgctcc tcatcaccga acatatcggc
     5221 ttgttgcggt tgggcttttt gcttatgccc aagcggaata tagcacgcct cgccattttc
     5281 cagtgcaaag gaaataccga ccaaattagc cgacattgcg tcaaggctgt cggtttcggt
     5341 atccaccgca atcaaacgag ctgcggtgag tttttcgatc caggctgata atttctgttc
     5401 agtatcaacg gtctcatatt tgctacgatc gatctcgacc acatttgcaa cattttcctc
     5461 atttctgacc gcttgtgtta cttggtaatt attcggtact ttttcagccg aagtttgagt
     5521 gaccggattg gcattttgat tcacttcgtt cagccagcgt ttaaattcat aatgctcaaa
     5581 taattgagca agctcagcac ggtcttgcgg ctgtgttaaa agttgatcgt gagtaacatc
     5641 aagttccaca tcggttttga tggtagcaag caaataggat aaatcggcat tcgctttttc
     5701 cgcttccaat tttggggcga aattttttgc cccacggaaa gaaagggtgg caatttgatc
     5761 caaattagca taaatctgtt caagtgaacc aatgccttgc aataaagcta atgcggtctt
     5821 ttcccccaca ccttttacgc ccggaatgtt atcggcggaa tcgcccatta atgccagaaa
     5881 gtcgataatc aactcaggcg gaatgccata tttttcaatc acgccttcac gatctaacaa
     5941 agtattgttc atcgtgttaa tcaacataat gtgatcgttc accaattgtg ccatatcttt
     6001 atcgccggtg ctgatcaaca catctttgcc gtctttagcg gcttgcacag caagcgtgcc
     6061 gatcacatca tcagcttcca caccttcaat cgaaatcagt ggaatgccta aggctttgat
     6121 aatgcgatgc aaaggctcaa tttgagggcg taaatcatcg ggcattggtg ggcggtgcga
     6181 tttatattgc ttaaacaact catcacggaa ggttttccct ttggcatcaa acaccacagc
     6241 aatatggctt ggattcactt gtgaaatcag gctttttaac atattcagca cgccatacat
     6301 tgcccctgtc ggttcgccta agcgattagt gagcggaggg aaagcgtgaa atgctcgata
     6361 taaataggaa gaaccatcca ccaataccag tggatttttt gcgatagttg ccataaaaat
     6421 ctctttataa tcaaataaat attggcgtta ttatacaaga atatttaaga attgagtgtg
     6481 tataaggctt attttaaata aaacgttccg aaaaaacatt gaatttcatt aaaaaattcc
     6541 tttatttatc aaataaatgc gatttgtttc ggaacgtttt tttaatgctt attttgcaac
     6601 atacggatta tcaatggaaa gcgttgctgt agacattgtg cctcctagta caaaaaaacc
     6661 gcttggtttc cctaagcggt tctaatctat aagaactatt aaactacaat ctgccccgtc
     6721 tcttttaagt acttatagat acgccctaac ataatctgcg ttggcgtttt gccaatatcc
     6781 tcttttgtta gcggtgcatc agtaatcgct ttggctgatt gagcatcaat atatttgtac
     6841 tcacttgtga tgattacaaa gtttgttacc tcgccatcgg tatcatcacc tgtgccaaca
     6901 acatacttag cattgagtga gccgtcatct tgcgttgagt agcttgcgat ggtggaatac
     6961 attgggttta agattttgt
//
LOCUS       DANLZQ010000119         6910 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.119, whole genome shotgun sequence.
ACCESSION   DANLZQ010000119 DANLZQ010000000
VERSION     DANLZQ010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6910)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6910)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6910
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.119"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..475
                     /locus_tag="PXE50_002267"
     CDS             <1..475
                     /locus_tag="PXE50_002267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623127.1"
                     /translation="KQIGVYSISNLNIDDLYFKGYCIQKNRVITLRADRIIKQFDDLA
                     LAENYAKNIPQDVFYLFDSLLNQQRKEKITPIYKIGLCFTGFKQARKNELIQLAVDND
                     LRVVQNVTGAVDFLIFDKESKTVGPAKLAKAEKLGIKIIDDEEFLYMLETGVVPD"
     gene            493..903
                     /locus_tag="PXE50_002268"
     CDS             493..903
                     /locus_tag="PXE50_002268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623128.1"
                     /translation="MFIPKSSKLKTNNYIEELNIKSIGETDMKKALTLLALSLFALPV
                     QADSLELARNKVKQIFISDEEPKVKDATWTAPFIFKVGVFDDGTKRDGYAEYVCQVLY
                     DHGFKGKGVLVSVIDIKKLVQTGDWVDLGKAKCQ"
     gene            1003..1263
                     /locus_tag="PXE50_002269"
     CDS             1003..1263
                     /locus_tag="PXE50_002269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excalibur calcium-binding domain-containing
                     protein"
                     /protein_id="HDL5623129.1"
                     /translation="MKKLVLSILFVISPMALAYSCNDPIPYCKEMQSCEQAKFYLNQC
                     NAGRLDRDNDGIPCENVCGKKGKSEKKDDKKSDKSKSKKTSN"
     gene            1295..2104
                     /locus_tag="PXE50_002270"
     CDS             1295..2104
                     /locus_tag="PXE50_002270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3800 domain-containing protein"
                     /protein_id="HDL5623130.1"
                     /translation="MMNNQSVWHLFCDESGISGKPFYAFGALWIREDKISLFEKEIQK
                     LREKHYCTDEIKWQGTNSKRFSEFYRELVSFFFQADYLFFNCIVVQQAIVNKAFHNGD
                     YEMAKQKHFNLLICNKIEQSLYKNRINRFVLSVDDLPFKYNKADEAMHIIANNIIRKK
                     TAVANAILALNEVDSRKSSGVQLCDLLLGAILSSYQNDITSERKKELTKWIALHLGWD
                     KLTYDTLQEEKKFNIWYFYDPTKGPRIVRTRETKLKYPLLKKKEQTFQPAR"
     gene            complement(2287..3525)
                     /locus_tag="PXE50_002271"
     CDS             complement(2287..3525)
                     /locus_tag="PXE50_002271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage late control D family protein"
                     /protein_id="HDL5623131.1"
                     /translation="MDFLTELTNHNHRTPAVSVTVRPKPSKDNEGEKAKDISTLITHR
                     LIQLTLTDNRGFEADQLDLELDDTDGLLALPSRGAILSVGLGWQNSPLTYKGEYTVDE
                     LTHDGPPDKVTIRARSADLRGTLTNRHERSFHRTTIGKIVKQIAEENKLKPMVGKEFE
                     NEEVKHIDQTNESSINLLQRLAEQFDAIATVKNGNLIFIKAGNATTASGKLLPLFRIT
                     RSSGDSHSFSIAEGDNYKAVKAYWHNTQTGKRGEVTWDENSQVKKVTKPTMRKKTKVK
                     RGADGKPIKGKDGKSIKETVFVKGKGRQVNAVVQSKPIESDSEAIKTLPHTYATAQSA
                     INACKRNFEKLQRGVATFSLTLAEGNAELIPELPVQVSGFKAEIDSNEWIISQVTHSL
                     NKGGGFTTALEMELKPKSED"
     gene            complement(3525..3962)
                     /locus_tag="PXE50_002272"
     CDS             complement(3525..3962)
                     /locus_tag="PXE50_002272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5623132.1"
                     /translation="MLQQFAMMSLGYFVFMRLTIPYQDTSREMNWSHVQNDVVGAMPK
                     SQFTGKAGETMEISAELRPEITGGKMSILALEMMAEQGSAYPLISGSTFMVLGWFVID
                     RISEQETTFFADGTPRAISFSMSLKRVDDSLLANIIDEVAGFI"
     gene            complement(3964..4311)
                     /locus_tag="PXE50_002273"
     CDS             complement(3964..4311)
                     /locus_tag="PXE50_002273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623133.1"
                     /translation="MEIKTVTFSKVITAFIFHIITLFVFTQLNEQAQATFMFFWWFFI
                     SLRFILVVGIMCVGIEELKIQEYRQTKAYACFSFISNFALCLQFVYFEHLIAAILFLI
                     SYIIYHSQTVTIK"
     gene            complement(4375..4491)
                     /locus_tag="PXE50_002274"
     CDS             complement(4375..4491)
                     /locus_tag="PXE50_002274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005228340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HDL5623134.1"
                     /translation="MADIATVFHWTPNTFDEMTIVELGQWREKARLRNGVES"
     gene            complement(4515..4829)
                     /locus_tag="PXE50_002275"
     CDS             complement(4515..4829)
                     /locus_tag="PXE50_002275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HDL5623135.1"
                     /translation="MKKVTLKQGILRGEKRITEIEVRKPLTKQLRGTNLTSLMQLSVD
                     EWCIVLPRITTPKLDKADFATMSAADLLKLSGKALDLMSEDFDEADEEDSEEQGKGEI
                     LA"
     gene            complement(4908..5414)
                     /locus_tag="PXE50_002276"
     CDS             complement(4908..5414)
                     /locus_tag="PXE50_002276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
                     /protein_id="HDL5623136.1"
                     /translation="MGLPAKLKNFNFSVDGTSYLGETTEVTQPKLAMQLEDYRAGGMI
                     APVGVNMGLEKLELEFKIGGHEEDLLKLFGGSISGNAFRFNGAYQHDDDDSVDAVELV
                     CRGRIAEIDEGSSKAGDDTEHSYKASLTYYKKTVNGVDIIEIDTLNQIYIVDGKDRLA
                     EIRKAMGL"
     gene            complement(5423..6604)
                     /locus_tag="PXE50_002277"
     CDS             complement(5423..6604)
                     /locus_tag="PXE50_002277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath protein"
                     /protein_id="HDL5623137.1"
                     /translation="MSILDTYLHGVEVVEVNAGGVTISTAATSVIGVVCTGDQADAET
                     FPLNTPVLITNPLNYLEKAGSTGTLRRTLNSIGSIVKTPTVIVRVAESDDSDTLTANI
                     VGTQENGKFTGIKALLTAQSTVFVKPKLLCVPQHDNQAVATELLSVAKKLNAFAFISD
                     NGATTKEQAYTYRQNFSQREGMMIFGDWKSYNTDKKAYDTDYAVARACALQAYIDKTV
                     GWHKNISNVELDGVTGITKAVEFDINESSTEANYLNEKGITICLNHNGFRYWGSRTLA
                     TDTRWAFQQSVRTAQIIKETIGAGLAWAVDMPLTPLRVKTILEAINNKLRSWASGDDP
                     RILGARVWVAEEITADIIKSGKFVIKYDYHWIPSLESLGLEQRVNDEYVVDLVNTLKA
                     L"
     gene            complement(6711..6857)
                     /locus_tag="PXE50_002278"
     CDS             complement(6711..6857)
                     /locus_tag="PXE50_002278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623138.1"
                     /translation="MLAEKPKKRWRFWYAFVNGLFFDKKHCYAAYKAEVYRKQYPPEF
                     TEIT"
BASE COUNT         1992 a         1422 c         1413 g         2083 t
ORIGIN      
        1 taaacaaatt ggagtttatt cgatttctaa tttgaatatt gatgaccttt acttcaaagg
       61 ttactgtatt cagaaaaata gagttatcac attaagagct gatcgcatta ttaaacaatt
      121 tgatgattta gctcttgccg aaaattatgc caaaaatatt cctcaagatg tgttttatct
      181 atttgattct cttctgaacc agcaacgaaa agaaaaaata acaccgatct ataaaatcgg
      241 tttgtgtttt actggattta agcaagctag aaaaaatgaa ttaattcaac tagcagtaga
      301 taatgatttg agagtagtac aaaacgtaac tggtgcagtt gattttttaa ttttcgataa
      361 agagtcgaaa actgttggac cagcaaaact agcaaaagct gaaaagttag gaattaaaat
      421 catcgatgat gaagaatttt tatatatgtt agaaactggc gttgtgccgg attaggtttg
      481 acttctcaat agatgtttat accaaaatca tctaaactaa aaactaacaa ttacatagaa
      541 gaattaaaca tcaaatcaat aggggaaacc gatatgaaaa aagcacttac actacttgca
      601 ctatcactat ttgcattgcc tgtacaagcc gatagcctcg aacttgctcg taataaagta
      661 aagcaaattt ttatcagtga tgaagagcca aaggtaaaag atgcgacttg gactgcacca
      721 tttatcttta aggttggagt ttttgatgac ggcacgaaaa gagatggcta cgccgaatat
      781 gtttgccaag ttttatacga ccacggattt aaaggtaaag gtgtgttggt tagcgtaatc
      841 gatataaaaa aactagtcca aacaggtgat tgggttgatc ttggcaaagc taaatgtcag
      901 taatacataa gggacagatt attctgtctc tttgtattta atcattaatg aagaaacctt
      961 tttactacac agttaatact atattttata atggggttca taatgaaaaa attagtcctc
     1021 tcgattttat ttgttatttc gcctatggct ttggcttata gctgcaatga ccctatccct
     1081 tactgcaaag aaatgcaatc ttgcgagcaa gcaaagtttt atttaaatca atgcaatgcc
     1141 ggtcgattag atagagataa cgatggcata ccttgtgaaa atgtttgtgg caagaaagga
     1201 aagtccgaga aaaaagacga taagaaatca gataaatcaa aatctaaaaa aacttcaaat
     1261 tagagacagg cgttgtgcct gattaaaagg ggtaatgatg aataaccagt cagtttggca
     1321 cttattttgc gatgaatccg gtataagcgg taagcctttt tatgctttcg gtgcattatg
     1381 gataagagaa gataaaatta gcttatttga aaaagaaata cagaaattac gagaaaagca
     1441 ctattgcact gatgaaataa aatggcaagg tacaaattct aaacgcttta gtgaatttta
     1501 tcgtgaattg gttagttttt tctttcaggc tgattattta ttttttaact gtattgtagt
     1561 tcaacaagct attgtcaata aagcttttca taacggtgat tatgaaatgg caaaacagaa
     1621 gcattttaat ttattgattt gcaacaaaat tgaacaatcc ttatataaaa acagaataaa
     1681 taggtttgtt ttatctgttg atgatctacc ttttaaatac aataaagctg atgaggcaat
     1741 gcacattatc gctaataata taattcgtaa aaagactgcc gtagcaaatg ctattctagc
     1801 attaaacgaa gtagattctc gtaaatcatc tggcgttcaa ctatgcgatt tattattagg
     1861 agcaatatta agtagctatc aaaatgatat tacatcggaa cgtaaaaaag aactaacaaa
     1921 atggattgct ttgcacctag gttgggataa attaacttat gatactttac aggaggaaaa
     1981 gaaatttaat atttggtatt tttacgaccc tacaaaagga cctagaatag taagaacgag
     2041 agaaacaaaa cttaaatacc cactattaaa aaagaaagag cagaccttcc agcctgcacg
     2101 gtgagtgtcc tcaaggactt atatgtgtaa aacaacgccc aatttcctca ctgggcggaa
     2161 tcacacaaag tagccgcccc tatgattctt tgtgttttat gtaaataaat ctgtaacttt
     2221 gattaatatt acttgttcaa gatcagagat gcaaggcttt tttatagtga ttttataaaa
     2281 atagcgttag tcttcagact tcggcttcaa ctccatctct aacgctgtcg taaacccacc
     2341 acctttattt aaactgtgcg taacctgcga aattatccac tcgttgctat caatctccgc
     2401 cttaaagcct gaaacctgaa ccggtaattc ggggataagc tccgcattgc cctcggcaag
     2461 agttaggcta aaagttgcca cacctcgttg tagtttttca aaattccgtt tacaagcatt
     2521 aatcgctgat tgtgcggtag cgtaagtatg gggtagggtt ttaattgcct cgctatcact
     2581 ttcaatcggt ttactttgca ccactgcatt aacttgcctg cctttgcctt ttacaaagac
     2641 ggtctcttta atgctcttgc cgtctttgcc ttttatcggc ttgccgtctg ccccacgttt
     2701 tactttagtc tttttccgca ttgtgggctt agtcactttt ttaacttggc tgttttcgtc
     2761 ccacgtcacc tcgcctcgct tgccggtttg cgtgttgtgc caataggctt taaccgcttt
     2821 gtagttatcc ccttcggcaa tcgaaaagct atgggaatcc cccgaactgc gggtaatgcg
     2881 aaacaggggt aacagtttac cgcttgcggt tgtggcgttt ccggctttaa tgaaaatcaa
     2941 attgccgttt ttcacggtag caatggcatc aaattgttct gcgaggcgtt gcaagagatt
     3001 aatagagctt tcgtttgttt ggtcaatgtg tttcacctct tcgttttcaa actccttgcc
     3061 caccatcggc ttgagtttgt tctcttcggc gatctgtttc acaattttac caatggtggt
     3121 gcggtgaaag ctccgctcgt ggcgattggt cagcgtgcct cgcaaatcag cacttcttgc
     3181 ccgaatcgtg actttatcag gtgggccatc gtgggttagc tcgtccaccg tgtattcgcc
     3241 cttgtaggtc agggggctgt tttgccagcc taacccgacc gataaaatcg ctcctcgact
     3301 tggcaaagcg agtaagccat cagtgtcgtc cagctctaaa tccagctggt ctgcctcaaa
     3361 gcctcggttg tcggttaagg tgagttgaat taagcggtgc gtgatcaggg tggaaatatc
     3421 tttggctttt tcgccctcat tatctttgct tggctttggg cgaaccgtca ccgaaacagc
     3481 cggtgtgcgg tggttatgat tggttagctc tgttaaaaaa tccattaaat aaaccctgcg
     3541 acctcatcaa taatattggc gagcagacta tcatcaaccc gtttaagcga catcgaaaag
     3601 ctaattgccc ggggcgtgcc gtctgcaaaa aaggtggttt cctgctcgct gattcgatca
     3661 atcacaaacc agcctagcac cataaaggtt gaaccactaa tcaacggata agccgagcct
     3721 tgctctgcca tcatctcaag ggcaaggatt gacattttgc ccccggtaat ttcagggcgt
     3781 agctcggctg aaatctccat tgtctcccct gccttgccgg taaattggct ttttggcatt
     3841 gccccaacca catcattttg aacgtgcgac cagttcattt ctcggctggt gtcttgataa
     3901 gggattgtca atcgcataaa cacaaaatag cctagcgaca tcattgcgaa ttgttggagc
     3961 atattattta atcgttacag tttggctatg atatatgatg taagaaatca aaaataaaat
     4021 tgccgcaata agatgctcaa agtaaacaaa ctgcaagcat aacgcaaaat tggatatgaa
     4081 actaaaacaa gcataagctt ttgtttgtcg gtattcctga attttaagtt cttcaatacc
     4141 aacacacatt attccaacta caaggatgaa tcgcagagaa atgaagaacc accaaaagaa
     4201 cataaaggta gcttgagctt gctcattaag ttgagtaaaa acaaataacg taatgatatg
     4261 aaaaatgaat gctgtaatca ctttactgaa tgtaactgtt ttaatttcca ttttaaaatc
     4321 cttatagcaa gcggtcgagt tttgcaaatt ttttgcgaaa aacgaccgct tgttttaact
     4381 ttccacccca tttcgtaagc gggccttttc tcgccattgc cctagctcga caatcgtcat
     4441 ttcatcaaag gtgttgggtg tccaatgaaa cacggtagca atatcagcaa tagcgtcatc
     4501 aacaaactgt ggaattaggc taaaatctcg ccctttccct gttcttcgct gtcctcttcg
     4561 tctgcctcat cgaagtcttc gctcattaaa tctaaggctt tgccggagag ttttagcaaa
     4621 tccgctgccg acattgtggc aaaatcggct ttgtctaatt ttggcgtggt aatgcgtggc
     4681 agtacaatac accactcatc aacgcttaac tgcattaatg aggtaagatt tgtgccacgc
     4741 agttgtttgg ttaatggctt acgcacctca atctcggtaa tacgtttttc accacgcaaa
     4801 atgccttgtt ttaatgttac ttttttcatt gtttaatcct taattattta tcattaaaag
     4861 ccccttgaaa aaaggggaag gggctttggg aaaatttagg ggaaaatcta taaacccatt
     4921 gccttacgaa tttccgctaa gcggtctttg ccatcgacaa tgtaaatttg gttgagggtg
     4981 tcgatttcga taatatcgac accgttcacc gtttttttgt aataggttag cgaggcttta
     5041 tagctatgct cggtgtcatc accggctttg cttgagcctt cgtcaatttc agcgattcgc
     5101 ccacggcaga ctaactctac cgcatcgact gaatcgtcat cgtcgtgctg gtacgcaccg
     5161 ttgaaacgga acgcattacc actgattgag ccaccaaata gcttgagcaa atcctcttcg
     5221 tgtccgccga ttttgaactc aagctccagt ttctctaaac ccatattgac acccacaggg
     5281 gcaatcattc cgcctgctcg gtagtcttca agttgcatag ccagtttcgg ctgtgtgact
     5341 tcggtggttt cgcccaaata gcttgtgccg tccaccgaaa aattaaaatt cttaagtttt
     5401 gccggtaatc ccatttttac ctctataacg ctttaagtgt attgactaaa tccactacat
     5461 attcatcatt gacccgttgc tctaagccta ggctttcgag ggacggaatc caatggtaat
     5521 cgtatttaat aacaaatttg cctgatttga taatatctgc ggtgatctct tcagctaccc
     5581 acacacgagc acctaaaatg cgagggtcat cacccgatgc ccaagagcgt agcttgttgt
     5641 taatcgcctc tagtattgtt ttcacacgca acggtgtgag tggcatatcc accgcccaag
     5701 ctaagcctgc tccgattgtc tctttaatga tttgagccgt ccgcaccgac tgctgaaacg
     5761 cccagcgggt atcggtggca agagtgcggg aaccccaata gcggaaaccg ttatggttta
     5821 agcaaatggt aatgcctttt tcgttcaggt agtttgcctc ggttgagctc tcgttaatat
     5881 caaactctac cgctttagtg ataccggtta caccgtctag ctctacgttt gagatgtttt
     5941 tatgccagcc gacagttttg tcgatatagg cttgcaacgc acaagctcgg gccactgcat
     6001 aatcggtatc ataggctttt ttatcagtgt tataagattt ccagtcaccg aagatcatca
     6061 ttccttcacg ctgagagaaa ttctggcgat aggtatatgc ctgttctttg gtggttgcac
     6121 cgttgtctga aataaacgca aacgcattca gctttttagc cacgcttaat agttcggtcg
     6181 caacggcttg attatcgtgc tgtggtacac aaagcaattt cggcttaaca aacacggttg
     6241 attgagcggt taataacgcc ttaataccgg taaatttgcc gttttcctgc gtgccgacaa
     6301 tatttgcagt taaggtgtcg ctatcgtccg actcggcaac tcgcacgatc accgttggcg
     6361 ttttaacgat tgagccaatc gaattaagtg tgcggcgtaa cgtgccggtg ctacctgctt
     6421 tttcaaggta atttaacggg ttagtaatta aaacgggcgt attcagcgga aaagtctcgg
     6481 catcggcttg gtctccggtg caaactactc cgataaccga agtagcagcg gtggaaatgg
     6541 tgacaccacc tgcattgacc tcaaccacct caacaccgtg tagataggta tctaaaattg
     6601 acatagtatt ccttaattgg gaaaggttag ggttgaatgt tggggtaaac tttaaaaaat
     6661 aaccgctcgg gttgcgagcg gttcgggctg tgaaatgggg tttaacagga ttaagtgatt
     6721 tcggtaaact ccggtggata ctgttttcga tacacctccg ctttataggc tgcatagcaa
     6781 tgctttttat caaaaaacaa gccattcaca aacgcatacc aaaaacgcca acgctttttc
     6841 ggcttttccg caagcattgc accacggtaa caacggctgc tggaaaaggt agcggagctt
     6901 gtttaaattg
//
LOCUS       DANLZQ010000120         6693 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.120, whole genome shotgun sequence.
ACCESSION   DANLZQ010000120 DANLZQ010000000
VERSION     DANLZQ010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6693)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6693)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6693
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.120"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(76..381)
                     /locus_tag="PXE50_002279"
     CDS             complement(76..381)
                     /locus_tag="PXE50_002279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antidote protein"
                     /protein_id="HDL5623139.1"
                     /translation="MRKPAHPGQILLDGFIEPNNIKIKELADHLGFSRETLSRVLHGK
                     TPMTANLALSLEEAGISTAKLWLNLQTKYDLWELKQQRLNPVMPFHFGGNYGETAHA"
     gene            complement(390..665)
                     /locus_tag="PXE50_002280"
     CDS             complement(390..665)
                     /locus_tag="PXE50_002280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011039853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5623140.1"
                     /translation="MIKSFKHKGLKQYFEKGITKGIQLNHQRKIDGILDLIDSAESID
                     EFMPFYQCHELKGNRKGIYSMTVNGNWRITFEFVNGDAYILNYEDYH"
     gene            957..1187
                     /locus_tag="PXE50_002281"
     CDS             957..1187
                     /locus_tag="PXE50_002281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623141.1"
                     /translation="MNAQATLNNHKDYILCGRKEKRTSDFINVFEVFENEATQEFVIE
                     RAMFRNGKLIDWNQSDKMNAEQAQQLWQAYIH"
     gene            1569..1805
                     /locus_tag="PXE50_002282"
     CDS             1569..1805
                     /locus_tag="PXE50_002282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623142.1"
                     /translation="MSNQEFVKLGSVEPSTIDELQKEDIRQAILKSVSITPYYVGLEI
                     AVCQAISAINKFSDGCITEELLDTKNGDKYRKNN"
     gene            2112..2187
                     /locus_tag="PXE50_002283"
     tRNA            2112..2187
                     /locus_tag="PXE50_002283"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2145..2147,aa:Arg,seq:tct)
     gene            2374..2880
                     /locus_tag="PXE50_002284"
     CDS             2374..2880
                     /locus_tag="PXE50_002284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623143.1"
                     /translation="MKTKYKIIIERAKQQGLTHIELTQKHCLYLATSVGKLCYGVANN
                     AEQHIKLAAGEIFTLLTIINHQIQFDEDLELHTWKASGTTPPEQRAIRMLHHTSQFAW
                     FAPWLVDSNEKEQNQNTIRINLFNKCSGILIELNGILKEYELTLDECLDEFLKNKHCL
                     NEFSIHKE"
     gene            2884..3243
                     /locus_tag="PXE50_002285"
     CDS             2884..3243
                     /locus_tag="PXE50_002285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623144.1"
                     /translation="MTTFSIYTSVWHDSSTKGFRHNIKHKRHDCWRADIRIKQKINDV
                     WVQISRIRKRFKCPEQAKSFVEQWKQIDSPAFMQHQINRQALREELSNLEQRKQKQDG
                     ILEVIEYRISQIKELLK"
     gene            3240..3719
                     /locus_tag="PXE50_002286"
     CDS             3240..3719
                     /locus_tag="PXE50_002286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623145.1"
                     /translation="MKRNKVESYTIRLLKNNHTKRYFGEVILNGIKEISTAEMMSEIN
                     AIKAVNKRIEALNKTKAVNLPNYPEIRGHQPIMYNYNFEQIEEDPEQVKPKPSKPKRK
                     PFIPYGLNGYFVDSNGNIRLHLDRRASAETITLETDFFNVLAEMVKRTQEANNAKHA"
     gene            3853..4065
                     /locus_tag="PXE50_002287"
     CDS             3853..4065
                     /locus_tag="PXE50_002287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623146.1"
                     /translation="MIGYEDYTDASLQPEEDPSEEAFILAEENIIELLENNGFETIAT
                     ILAGSDGWRNAINAYLAEQNKHRNEF"
     gene            4078..5028
                     /locus_tag="PXE50_002288"
     CDS             4078..5028
                     /locus_tag="PXE50_002288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623147.1"
                     /translation="MTTANQQFELILKTESRVVSTNLQTFEEQANQYLATLTTTFETD
                     DDFAKAKEEVKELESIEKKIRDAIKQTQTGEIAELVLTAEQIAERFRQERLTRDKLVK
                     SKETEIKKQIADKAIEEITDTRNKLVKVSDISLALEITMPKHGIANRIAEAQKNKRTI
                     DSLTKAVNAEKALIISEMSVEIGRLTERLEQLAAKSAYLFPDAVKLIATQDDLAPIIQ
                     QRLAEEAEREAAIKAKAEADKVQAEAKAITDKMERKQAVENPQNVAKMNIEEPAQTDG
                     PLGDFIITIRLNQTIQTNAVSIARELKAKFGDSVSLNKAK"
     gene            5069..5863
                     /gene="bet"
                     /locus_tag="PXE50_002289"
     CDS             5069..5863
                     /gene="bet"
                     /locus_tag="PXE50_002289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage recombination protein Bet"
                     /protein_id="HDL5623148.1"
                     /translation="MTTALQTLTNKLAERFEMGDGSGLVETLKSSAFAGATVSDAQMI
                     ALLVIANQYQLNPWTKEIYAFPGGNGGLTPIVGVDGWVRIINREPQYDGMEFHFTDDY
                     SACTCTIYRKDRSKPIVVTEFMGECKKSSPAWNSHPKRMLRHKAMIQCARLAFGFTGI
                     YDQDEAERIAENEKPPKNITPQNNVVETTAVELISEEQLSQIRQLMQVTGTEEAKILA
                     YIGVQALNQIPKSQAEAVIKKLNLTLDKQNAEKADNGESVGEEIPL"
     gene            5860..6495
                     /locus_tag="PXE50_002290"
     CDS             5860..6495
                     /locus_tag="PXE50_002290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqaJ viral recombinase family protein"
                     /protein_id="HDL5623149.1"
                     /translation="MTGDLIILDCEQGSEEWLNARLGIPTATGIENIVTPSGKKSSAW
                     NSYLAELVAESIEGAKDGFKSSDMARGNELEPLARMAYEFETDTEVVQVGGVYLNAEK
                     QLMVSPDGLIPNLKKGLEIKCPKMKTHIKYLLEGGVPNEYLIQVQSALWVTGYETWDF
                     VSYCPEYQKQPLYIYTAERDPVLMKAFDQYIPQFIKSLYALKGVTAPKGAF"
     gene            6508..6684
                     /locus_tag="PXE50_002291"
     CDS             6508..6684
                     /locus_tag="PXE50_002291"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623150.1"
                     /translation="MTTQKKYELLQNDTINHNGRTLYRIKAICHFRRTAEYSARATHA
                     TAAECYGGIACTST"
BASE COUNT         2326 a         1381 c         1327 g         1659 t
ORIGIN      
        1 atattccttg aataaaccgc cctcgtggcg gttttctttt cctaagaaca ataaaatcct
       61 ccgaagaggg cattattaag cgtgagcagt ttctccataa tttccaccaa aatgaaaagg
      121 cataacagga tttaaccgct gctgctttaa ctcccataaa tcatatttag tttgtaagtt
      181 tagccataac ttagccgtac taattcctgc ctcttctaaa cttaacgcta aatttgcagt
      241 cattggtgtt ttgccgtgta atactcttga taaagtttca cgagaaaacc caagatgatc
      301 tgctaattct ttaattttga tgttatttgg ttcaataaat ccatctaata aaatttgccc
      361 cggatgtgct ggtttacgca taactccccc taatgataat cttcataatt caaaatataa
      421 gcatcgccat ttacaaattc aaatgtaatc cgccagttgc cattaaccgt catagaataa
      481 atgccttttc gatttccttt taactcgtgg cattggtaaa aaggcataaa ttcatcaata
      541 ctttctgctg aatcaatcaa atctaaaata ccatcgattt tacgttgatg attaagctga
      601 ataccttttg ttattccttt ttcaaaatat tgttttaagc ctttatgctt gaagctctta
      661 atcataataa cacctagcaa acacaatgtg atacaaatat atcacgcaca ataaaaaaga
      721 caatcttttt taagtgcttt ttctcctaat tgtctttctc ttcttatgtt aagtgtttaa
      781 aaaacaagca atcaaacaac ctttctaaaa ataatttctc tttaaaatca attatttaat
      841 cacgaattga aatttgtttg gctaaaataa ttacaaattg aattgactta atgatttcaa
      901 tttgtgataa taaacccatc aaaacaaaca acgccacaga caaagaggaa accaaaatga
      961 acgcacaagc aacgctaaat aaccacaaag actacatttt atgcggacgc aaagaaaaac
     1021 gcaccagtga tttcatcaat gtgtttgagg tctttgaaaa tgaagccacg caagagtttg
     1081 tgattgaaag agcaatgttc agaaatggca agttaatcga ctggaaccaa agcgacaaaa
     1141 tgaacgccga gcaagctcaa caactttggc aagcctacat tcactaagaa tttttatcaa
     1201 agcccttcac ggagggcttg aataaaggtt ctaaacctcg ccgaaaggca ttgttcttta
     1261 aaaattaaac caaaaacaca tcacgacaag cggattactt agcaatgtaa tgacattgga
     1321 gagacagaac caatctttgc ataaagcggt aaaacgtatg cggtaaatga acttataggc
     1381 aagttgtgaa actctctaag ctactcggac tgaaagaata gtacggtagt tgtggcgaat
     1441 ttactggtga tgtgcgaact agcggaaagg ttaagcactg gcagtgaatc gggaagcaca
     1501 aacgctggtt caattccaaa gcatatttga gaaagtgtgc tttggaatat taataacagg
     1561 agaacaaaat gagtaatcag gaatttgtta aattaggcag cgttgaacct tcaacgattg
     1621 atgaattaca gaaagaagat attaggcagg caatattaaa atccgtctct ataacgccat
     1681 attatgtggg gctggaaata gcggtttgcc aagcaatatc agccatcaat aaatttagtg
     1741 atggctgtat tacagaagag cttttagata cgaaaaatgg tgataaatac cgaaaaaata
     1801 actaatcaat aacaccaaag tgatttcatt ttttcggcat tagccctaga tgttgcccaa
     1861 gtattatatt cctcgaagtt gtggcaaaca agaggacttg gcccggtggc tcacaagtat
     1921 aaaaaagagc caccatctct aacagctctc aacagagagt gagacaaata accccgtttt
     1981 agttttaatg ttttctaaag tcggcgttag gcagcgaaac gaatgtacta gagagttgtt
     2041 agagatggtt agtccatcac attccttaga ttgaagtaag ccctgccgtt ggggttaagc
     2101 aacggtactt tgaccgcata gttcagtgga tagagcagct gccttctaag cagtgggtcg
     2161 agagttcgaa tctctctgcg gtcgccatcc aaaaccgctt tacgcacatc atcgatgacg
     2221 agcctacgaa gtggaaacct accgtgtaga gcggttttga atggctaagt tgtgtaactg
     2281 ctacaactta aaaagagcgg ttgataataa acataatgac tccgtttccc cgcctcgtgc
     2341 ggggcttttt ttatccacat aaaaggattc aaaatgaaaa ctaaatacaa aattattatt
     2401 gagcgagcaa aacaacaggg tttgacccat attgagctta ctcaaaaaca ttgtctgtat
     2461 ctcgctacat cagtagggaa actgtgctac ggggtagcta ataatgcaga acaacatatt
     2521 aaacttgctg ctggagagat ttttacacta ctaacgatca ttaaccatca aatccagttc
     2581 gatgaagact tagagcttca cacgtggaaa gctagtggaa caaccccacc cgagcaaaga
     2641 gcgatacgta tgttacatca tacctcgcaa tttgcttggt ttgctccttg gttagtggac
     2701 agcaatgaaa aagaacaaaa ccaaaataca atcaggatta atttatttaa caaatgctct
     2761 gggattctga ttgaactaaa tggcattctt aaagaatacg agctaactct tgatgagtgc
     2821 ttagatgaat tcttgaaaaa taagcattgt ttgaatgaat ttagtattca caaggagtaa
     2881 aaaatgacga cgtttagtat ttataccagt gtatggcacg acagctccac gaaaggcttt
     2941 cgccacaaca ttaagcataa acgccacgat tgctggagag cggatatccg cataaagcaa
     3001 aaaatcaatg atgtgtgggt gcagatttca aggatacgca aacgcttcaa gtgccctgaa
     3061 caggcaaaat cctttgtaga acaatggaaa caaattgatt cacctgcatt tatgcaacac
     3121 caaatcaacc gccaagcatt aagagaagaa ttatcaaacc ttgagcaacg caaacagaag
     3181 caagacggaa tacttgaggt gattgagtat cgtattagcc aaatcaagga gttgctgaaa
     3241 tgaaacgcaa taaagtagaa agctatacta tccgcttatt aaaaaataat catacaaaac
     3301 gctacttcgg agaagttata ttaaacggca taaaagaaat cagcacggca gagatgatgt
     3361 ctgaaattaa cgctattaag gcagtaaata agcgcattga agctctgaat aaaaccaaag
     3421 ccgttaattt gcctaattat cctgaaatcc ggggtcatca gcctattatg tacaattaca
     3481 attttgaaca aattgaggaa gatcctgaac aggttaagcc taaaccatca aaaccaaaac
     3541 gcaagccatt cataccttat gggctaaacg gctactttgt ggatagcaac ggtaatattc
     3601 gcttacatct agacagacga gcaagtgccg aaacaattac ccttgaaact gatttcttca
     3661 acgttcttgc cgaaatggta aaacgtacac aagaggcaaa caatgctaaa catgcttaga
     3721 caatggatta aatacggctt atacgccctg ctttttatgg ttgccatcac cctcctaatg
     3781 caatgaagag cttatccctg aaagcacctg caagcctgaa acttgcgaat ttaaagtaac
     3841 ggagaaagtg tgatgatagg atacgaagac tacacagatg cttcacttca accagaagaa
     3901 gaccctagcg aagaggcttt catcttggct gaagaaaaca tcatcgagct attagaaaac
     3961 aacggctttg aaaccattgc caccatccta gccggttctg atggctggcg taacgcaatc
     4021 aacgcctacc tagccgaaca gaacaaacac agaaatgaat tttagaggaa taagaaaatg
     4081 acaactgcaa atcaacaatt tgaacttatt ttaaaaaccg aaagccgagt ggtttctacc
     4141 aacttgcaaa cttttgaaga gcaagcaaat caataccttg ccacgctcac caccaccttt
     4201 gaaaccgatg atgattttgc aaaagcaaaa gaagaagtga aggagcttga aagcattgag
     4261 aaaaaaattc gtgacgcaat taaacaaacg caaactggcg agattgcgga attggtatta
     4321 acagcagaac aaatcgctga acgtttccgc caagagcgat taacccgaga caagctcgtt
     4381 aagagcaaag aaacggaaat caaaaaacag attgccgata aagccattga agaaatcact
     4441 gataccagaa acaagctggt taaagtaagt gatatttccc ttgccttaga aatcacaatg
     4501 ccaaaacacg gcattgctaa tcgtattgcc gaggcacaga aaaataaacg cacgattgac
     4561 agcttaacca aagccgtgaa cgccgaaaaa gcgctgatta tcagcgaaat gtcggtagaa
     4621 atcgggcgct tgactgagcg attagaacag cttgctgcaa aatcagctta tctttttcct
     4681 gatgcagtga aattgatcgc aacccaagac gacctcgccc caattattca acaacgcctt
     4741 gccgaagaag ccgagcgtga ggcggcgatt aaagccaaag cagaagccga caaagtacaa
     4801 gccgaagcca aagcgattac tgataaaatg gagcgcaaac aagcggtcga aaatccgcaa
     4861 aatgtggcaa aaatgaacat cgaagaaccg gcacaaaccg atgggccatt aggcgatttt
     4921 atcattacta ttcgcttaaa ccaaacaatc caaaccaacg cagtcagtat tgctcgtgag
     4981 ctgaaagcga aatttgggga tagcgtttcg ctcaataagg ctaaatgatt tgataccgca
     5041 caaattcaac ctaaataagg atcatattat gacaactgca ttacaaacac taaccaacaa
     5101 acttgccgag cgttttgaaa tgggagatgg ctcaggatta gttgagacac ttaaatcgtc
     5161 tgctttcgca ggggcaaccg taagcgatgc tcaaatgatt gcactattgg ttattgctaa
     5221 ccaataccaa ttaaaccctt ggacaaaaga aatttatgca ttccccggtg ggaacggtgg
     5281 attaacgcct attgtcggcg ttgatggttg ggttcgcatt attaaccgtg agcctcaata
     5341 tgatggaatg gaatttcatt ttaccgatga ctattccgcc tgtacttgta ctatctaccg
     5401 taaagataga agtaaaccga ttgtggtgac ggaatttatg ggggaatgta aaaagagctc
     5461 tccagcttgg aactctcacc caaaaagaat gttacgccat aaagcaatga tccaatgtgc
     5521 aagattagcc tttggcttta cgggtattta cgaccaagac gaagcagagc gtattgcgga
     5581 aaatgaaaaa ccacctaaaa acatcacacc acaaaataac gtggtagaaa ccactgccgt
     5641 tgaactcatt tcggaagaac aactgtcgca aatccggcag ttaatgcaag taaccggtac
     5701 ggaggaggcg aaaattctcg cctatattgg cgttcaagca ctgaaccaaa tccctaaatc
     5761 gcaggcagag gcagtgatta aaaagctcaa tcttacgcta gacaagcaaa acgctgaaaa
     5821 ggcggataat ggcgaaagtg tcggtgagga aatcccacta tgacaggcga tttaatcatt
     5881 ttagattgcg aacaaggatc agaagaatgg ctcaatgcca gattgggcat tcccaccgcc
     5941 acaggcattg aaaatatcgt tacgccaagc ggtaaaaaat cgtccgcttg gaatagctat
     6001 cttgccgaac tggttgccga aagcattgag ggagcaaaag acggttttaa gtcgtctgat
     6061 atggcacgag gcaacgagct tgaaccgctt gcacgaatgg cttacgagtt tgaaaccgac
     6121 accgaagtcg tgcaagtcgg cggtgtgtac cttaacgccg aaaaacagtt aatggtaagt
     6181 cctgacggct taattcccaa tctaaaaaaa gggttggaaa tcaaatgccc gaaaatgaaa
     6241 acccacatca aatacctgct agaaggcggt gtgccgaatg aatatcttat tcaagtgcaa
     6301 tctgcccttt gggtaacagg ctacgaaacg tgggactttg tcagctactg ccccgaatac
     6361 caaaaacaac cgctttacat ctacacagcc gaacgtgatc cggtattgat gaaagccttt
     6421 gatcaatata tcccgcaatt tatcaaatcc ctttatgcat tgaagggggt aaccgccccg
     6481 aaaggggctt tttaataggt agccaatatg acaacccaaa agaaatacga actactccaa
     6541 aacgacacaa tcaaccacaa cggcagaaca ctctaccgca tcaaagccat atgccacttt
     6601 aggcggacgg ctgaatattc cgcaagagcc actcacgcca cagccgctga atgctatggt
     6661 ggaattgcct gtacatcaac ataaccacaa aca
//
LOCUS       DANLZQ010000121         6633 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.121, whole genome shotgun sequence.
ACCESSION   DANLZQ010000121 DANLZQ010000000
VERSION     DANLZQ010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6633)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6633)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6633
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.121"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(74..1765)
                     /gene="dld"
                     /locus_tag="PXE50_002292"
     CDS             complement(74..1765)
                     /gene="dld"
                     /locus_tag="PXE50_002292"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HDL5623151.1"
                     /translation="MSNNSLISQLTEIVGQSYIITDPTKTEAYRSGYRFGTGSAIAVV
                     KPTTLLEYWNVLKACVAADVIVISQAANTGLTGGSTPSGNDYDRDIVIINTMRMNGIQ
                     LINNANQVVCLPGSTLNELELLLKTHGREPHSVIGSSCIGASVIGGICNNSGGALVQR
                     GPAYTEMALFAQLNEDGTLELKNHLGIDLGDTPEEILENLQAQRYQRKDIQQACGKGH
                     DHAYCNHVRQIDEDSPARFNADPARHYEAAGSAGKLAVFAVRLDTFPLEKDTAVFYIG
                     TNHTDTLNDIRRYMLANFEVLPISGEYIHRDAFDIAADYGKDTFWVIKKLGTHRLPQL
                     FSLKAKVDRMAKKLTFLPANLSDKILQAISKMLPQHLPESLRDYRNQYEHHLIIKMGG
                     KGVQEARDYLARYFADTQKGGYLECNPTESQAAMLHRFAVASAAIRYRAIHDKEVEDI
                     VALDIALRRNDKAWFEVLPPEIESQITHKLYYGHFMCHVFHQDYIVKKGVDCLALEHQ
                     MLELLDKRGAQYPAEHNVGHLYEAKPTLRKFYRQLDPTNSFNPGIGQTSKKKYWK"
     gene            complement(1977..3074)
                     /locus_tag="PXE50_002293"
     CDS             complement(1977..3074)
                     /locus_tag="PXE50_002293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS481 family transposase"
                     /protein_id="HDL5623152.1"
                     /translation="MFYSSNPLIKHKTGLLNLAEELGNISQACKVMGMSRDTFYRYQQ
                     AVEQGGVEALLNQNRRVPNIKNRVDESTEKAVVQFALDNPAFGQVRVSNELRKQGIFV
                     SAGGFCLCRWFLSLQVVFVSAGGVRSIWLRHHLANFKQRLTALEKLVAEQGIILSEPQ
                     IQALERKKEDEIACGEIETAHPGYLGSQDTFYVGNIKGVGRIYQQTFIDTYSKVAFAK
                     LYTMKTAITAADMLNDKVLPFFESQRLPMLRVLTDRGSEYCGKVENHDYELYLAINDI
                     EHTKTKVKQPQTNGICERFHKTILQEFYQVAFRKRIYMDLEALQADLDEWLMYYNHHR
                     THQGKMCCGRTPMETLVDGKRIWAEKNLSSN"
     gene            3404..4120
                     /locus_tag="PXE50_002294"
     CDS             3404..4120
                     /locus_tag="PXE50_002294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3800 domain-containing protein"
                     /protein_id="HDL5623153.1"
                     /translation="MYLMYVDESGSTTDPTQKYFVLSGIAVFERNTHWIEKKMNVIAS
                     QFCQYSEGSDPYFYELHGSPMRSGKSEWRGIPMSERINAIQDCLKLVQSNNIRIFAAV
                     IEQGYSSGQDTITECFEQISSRFDMYLSRLHAQGNTQRGISIFDKSSTEKSIQALART
                     FKNSGHTYGKLRNFSEVPLFLDSKSSRLIQLADLVSYAIFRHYEHNDSSFYDIIRNNF
                     DYHNGRIHGLYLRNKEDIIS"
     gene            complement(4163..5081)
                     /locus_tag="PXE50_002295"
                     /pseudo
     CDS             complement(4163..5081)
                     /locus_tag="PXE50_002295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005700778.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
     gene            complement(5083..>6633)
                     /locus_tag="PXE50_002296"
     CDS             complement(5083..>6633)
                     /locus_tag="PXE50_002296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase/relaxase domain-containing protein"
                     /protein_id="HDL5623154.1"
                     /translation="VHDIGKVVVDIEITLKDGSRWFAWNGLPPQPYKFKYIKGRDYHL
                     HPVLGGFLANQLIPKSAFDWLGQYPEVISSLMYAMSGHNDKAGLLSEIVQKADQHSVT
                     LALGGDVNKLVQRPVNSLSKQLVLALRYLLEQKIKLNTPKGPADGWFTEEGLWLVSKT
                     AADNIRAYLLGQGISVPKDNPKLFDEMQSLGIVEESPAGGAIWSCRIQADSGWTPANT
                     FTLLRIKPEVAWENINDRPNYFAGKVKIVEQITEESNIETQSTLVDGTTKPAPLPSVQ
                     TGGIIASKEVEISQVETNSDNAPSSEIIINDENDLTSFVLDMFAPTESSEPSLDDISI
                     GKGQEIASMPSKQEVQDKSTTKKLKVTQSAVETPETLTLSELQLQNKENSITGDNFVK
                     WLKSGIATNKFAINKPTAKLHIVEDHLFLVTPVIFEMYLQETGQPYDKETINNLQYDF
                     QGLGIHSPKNTMTNGKPDTINFWKCDVIGPRKTSSLTGYLIKNTRLFFGDKVLLNNHC
                     LTLQKEET"
BASE COUNT         1911 a         1346 c         1246 g         2130 t
ORIGIN      
        1 attagcaact gttttgtcca cttggcatag tttttgacgg atcagcaact attttgtcta
       61 ctatgccttt ttgttacttc cagtattttt tcttcgaggt ttgcccgatc cccggattaa
      121 agctgttggt tggatcaagc tgccggtaga atttgcgtaa ggtcggtttt gcttcgtaaa
      181 gatgaccgac attatgctcc gcagggtatt gtgccccacg tttatccagt aattctaaca
      241 tctgatgttc caacgccaaa caatctacac cttttttcac aatatagtct tgatggaaaa
      301 catggcacat aaaatgccca taataaagtt tgtgcgtgat ttgactctct atttccggcg
      361 gtagcacttc aaaccacgct ttatcatttc ggcgaagggc aatatctaaa gcaacaatat
      421 cttccacctc tttatcgtga atggctcgat agcgaatcgc tgccgaagca acggcaaaac
      481 gatgtaacat tgccgcttgg ctttcagtcg gattacactc caaataaccg cctttttgtg
      541 tatcagcaaa ataacgggca agatagtctc ttgcttcttg aacgcctttt ccacccattt
      601 tgataattaa gtgatgttca tactggttac ggtagtctcg aagactttcc ggcaaatgtt
      661 gcggtaacat ttttgagatt gcctgtaata ttttatcact gagatttgcc ggtaaaaagg
      721 tgagtttctt cgccattctg tccacttttg ctttaagtga aaagagttgt ggtaagcggt
      781 gtgtaccgag ttttttaatc acccaaaaag tatctttacc gtaatcagcg gcaatatcaa
      841 aggcatcacg atgaatatat tcaccggaaa tcggcaatac ctcaaagttg gctaacatat
      901 agcgacgaat atcgtttaat gtgtccgtat gatttgtccc gatataaaaa acagccgtgt
      961 ctttttcaag cggaaaggta tctaatcgca ccgcaaacac cgctaacttt cctgcactac
     1021 cggcagcctc gtagtggcgg gcaggatcgg cattaaaacg ggcaggggag tcttcatcaa
     1081 tttggcggac gtgattacaa taggcgtgat cgtgtccttt tccgcacgct tgctgaatat
     1141 ccttacgctg ataacgttgg gcttgcagat tttctaaaat ttcttccggc gtatcaccta
     1201 aatcaatacc taaatggttt tttaattcca gcgtgccgtc ttcatttaac tgggcaaaca
     1261 gtgccatttc agtataagcc ggcccacgtt gcactaatgc accccctgaa ttattacaaa
     1321 taccaccgat aaccgaagcc ccgatacagg acgatccgat caccgaatgc ggttcacgtc
     1381 cgtgcgtttt cagcaacaat tccagctcat ttaatgtcga gcccggtaag caaacgactt
     1441 gattggcatt gttaattaac tgaatgccgt tcattcgcat tgtgttaatg atcacaatat
     1501 cccgatcata atcgttgccg cttggtgttg aaccaccggt taatccggta ttggccgctt
     1561 gtgagataac aatgacatcg gcggcgacac aggcttttaa tacgttccag tattctaata
     1621 acgttgtagg ttttaccact gcaatcgcac tacccgtgcc aaagcgatac ccgctacgat
     1681 aggcttccgt cttagtcggg tcagtgatga tataagactg cccgacaatt tcagtaagct
     1741 gagaaatcag tgaattattt gacattatgc ttccctcaaa ggtagaaata gatagggcag
     1801 tatagcaata aacaaaagag agcaaagcag aatgttacaa aattgtgaac tactgcacag
     1861 aataaatgaa gaaatgaagt aaaagaaagc gagctaaaag agcgtcgccc gctttatttg
     1921 tagaaaatca aacctaatct gacagtcccc cgtttaaaat taccgtgtct gtcagattaa
     1981 tttgagctta aattcttttc tgcccaaatg cgttttccat caactaatgt ctccatcggt
     2041 gttcttccac agcacatttt tccttgatgg gttcgatgat ggttataata cattaaccat
     2101 tcatctaagt cagcttgcaa tgcctctaaa tccatataaa tccgttttct gaatgccact
     2161 tggtagaact cctgcaaaat cgttttgtga aaacgctcac agatgccgtt tgtttgtggc
     2221 tgtttcactt tggtttttgt gtgctctatg tcattgatag ccaaataaag ctcataatcg
     2281 tgattctcaa ctttcccaca atactcactg cctcggtctg tcagcactcg taacataggt
     2341 aacctctggc tttcaaagaa tggtaatact ttgtcattta gcatatcagc agcagtgata
     2401 gccgtcttca ttgtatacag ttttgcaaat gccactttac tataagtatc aataaacgtt
     2461 tgctgataaa tacgacccac acctttaata ttgccgacat aaaaggtatc ttgtgaccct
     2521 aaatagccgg ggtgtgccgt ttcaatttca ccacaggcaa tctcatcttc tttcttccgc
     2581 tccaaggctt gtatctgtgg ctcactcaga ataatgcctt gctctgccac caatttttcg
     2641 agggcagtta agcgttgctt aaaattagct aagtgatgtc tcaaccaaat ggaacgtaca
     2701 ccacctgcag agacaaaaac cacctgcaga gacaaaaacc acctgcagag acaaaaacca
     2761 cctgcagaga caaaaatccc ctgtttacgc agttcattac tcactcgaac ttgaccaaaa
     2821 gcaggattat ctaaagcgaa ttgtacaacc gctttttctg tggattcatc cacacgattt
     2881 ttaatgttgg gaacacgtcg attttgattt agtaatgcct caacaccgcc ttgttcgaca
     2941 gcctgttgat agcgataaaa agtatctcga ctcatcccca ttaccttaca ggcttgtgag
     3001 atattaccca gttcttctgc taaatttaat aaaccggtct tgtgtttaat aagtggattg
     3061 ctagaataaa acatgagagt ttcctttttg tttagattga tttttgacac tcatattcta
     3121 aacgggaaac tctcactttt tagagtgaat tgtcagatca agtctgatct tctacagacg
     3181 atccaggtct tacacattct ttcaagtttg taaagcctga aaattatttt ttatacttga
     3241 tttttgtcaa aaagtctcta cactatatgg cagggtcagt tttcgctgtt taacggtgtt
     3301 taatgagatt ttcattactg gctctcctta atagaaattt atggaagagc tatctgatag
     3361 agtaatctag cgatagctct ttttcattga acaaagaggc tatatgtatc ttatgtatgt
     3421 tgatgagtct ggttctacga cagatcctac tcaaaaatat tttgtattat caggtatcgc
     3481 tgtatttgaa cgaaatactc attggattga gaaaaaaatg aatgtgatag cctctcaatt
     3541 ctgtcaatat tctgaaggga gtgatccata tttctatgag ttacatggtt caccaatgag
     3601 atctggaaag agtgaatgga gaggcattcc aatgagtgag cgtattaatg ccattcaaga
     3661 ttgcttgaaa ttagttcaaa gtaataatat tcgtatattt gcagcagtta tagagcaagg
     3721 gtattctagt ggtcaggata ctattacaga atgttttgag caaatatcat ctcgatttga
     3781 tatgtatctg agccgtttac atgcccaagg taatacccaa agaggcattt ctatctttga
     3841 taaatcatcg actgagaagt caatccaagc acttgcaaga acattcaaaa atagtgggca
     3901 tacttatggg aaacttagaa atttctcaga agttccatta tttcttgact caaagtcatc
     3961 gagattaatt cagctagcgg atctagtttc ctatgcgata tttagacact atgaacacaa
     4021 tgatagctca ttttacgata ttataagaaa taactttgat tatcataacg ggcgtattca
     4081 tggtttatat ttacggaaca aagaagatat tatttcataa aaattcgccc caaaagggag
     4141 aagtatctcc cttttgtatt ttttataaca aattaaccgt ttctctcaac atttccacat
     4201 cgtgttcaat atatcctagt gtcacactga tatctttatg ccctaacagt ttctgaacca
     4261 cataaacatt ttcgggcttc ttcattaatt gagtagcaac tgtatgtcga aatctgtgtg
     4321 gtgatgaagt aaaaccgacc aagtcagaaa tatgccgaaa tatatgtgta agctgatttt
     4381 ggctcatcgg ctgtcctctt cttcgagagc atcgagaaaa taaattgaga ttgaacaatt
     4441 ggcaattatc tgtttgtttt cttattttta attcagtaat aagcctttct atatgaatat
     4501 aaagtgaatc tgaaatcggt acgatatggt aatcatgatt tttattgatt tccggcgaaa
     4561 tataaatcgt cctattagaa agatctacat cactaatttt cagtttcact aattgtcctc
     4621 gccgaatccc cgtacatctc aatgtcataa taattgcaag gacaaaccag cttggtttta
     4681 gaaagtcagg taatacaacg ttattattga gtatgtggtc tattttatgt aattgttcgg
     4741 ttgaataagt tttctttctc cttttcgatt ctcgaataaa taactgatta aatggatttc
     4801 gatttatatt aagtaatcct tgcgatatac caaagttata taaggctttt aaatgtctga
     4861 cataattatt ccacgttact gctttgattt tatcgccaac aatttgatta cgccattcaa
     4921 tgagcatatc ggtggtaatg tcattggcat ttaactttgg ataacgcttt ttgataattc
     4981 ggattacgtt gttgtagctc cgtttggtat ccggacgaag atagtgacga tagaaaaaaa
     5041 aatcggtcta gtagcgaatc aaaagagata gaagttatca ttttaagttt cctctttctg
     5101 taaagttaaa cagtgattat ttaatagtac cttatcccca aaaaagagac gggtattttt
     5161 tatcaaatat cctgttaaag aggaagtctt tctcggtcca atgacatcac atttccaaaa
     5221 attgatggta tccggcttac cgttggtcat tgtgttttta ggtgaatgaa tccctaatcc
     5281 ttgaaaatca tactggagat tattaattgt ttccttatca taaggctgtc cagtctcttg
     5341 caaatacatt tcaaaaataa cgggggtaac taaaaacagg tggtcttcaa caatatggag
     5401 cttggcagta ggcttgttaa ttgcaaattt gttggtcgca atacctgatt tgagccactt
     5461 tacaaagtta tctcctgtaa ttgagttctc cttattctgt aactgtagct ctgatagtgt
     5521 taatgtttcg ggcgtttcta ctgcactttg tgttactttg agctttttag tggtagattt
     5581 atcctgtact tcttgtttgg atggcatact tgcaatttcc tgtcccttac caattgaaat
     5641 atcatcaagg cttggttcgg aactttccgt aggtgcaaac atatccagca caaaggaggt
     5701 taaatcattt tcatcattta tgatgatttc tgaggatggt gcattatccg agtttgtctc
     5761 tacctgagat atttcaactt ctttagaggc aataatgccc cctgtctgaa cactcggtaa
     5821 tggagctggt ttagtggtcc catcgactaa tgtagactga gtctctatat tactttcttc
     5881 tgttatctgc tcgactattt taacttttcc ggcaaaataa tttggtcgat cattaatatt
     5941 ctcccaagcc acttctggtt taattctcaa taatgtaaag gtatttgctg gcgtccaacc
     6001 tgaatcagct tgaatacggc aactccaaat tgctccacca gccggtgatt cttctacaat
     6061 accgagagac tgcatttcat caaataactt tggattatcc ttaggcactg aaattccctg
     6121 ccccagtaag taagctcgga tattatcagc agcagttttg ctaacaagcc acaatccttc
     6181 ctcagtgaac caaccgtctg ccggaccttt gggtgtattt aactttattt tctgttccag
     6241 caaataacgt agtgccaaga ccagttgctt tgacagagaa ttgacaggac gttgaaccag
     6301 tttatttaca tcgccaccga gtgcgagggt aacactatgc tgatcggctt tctgcacgat
     6361 ctcagataaa agcccggctt tatcgttatg cccagacatt gcatacatca gtgaagaaat
     6421 gacttctgga tactgtccca gccaatcaaa cgcagatttt ggaataagtt gatttgcaag
     6481 gaagcctcct agcaccggat gaagatggta gtctcgacct ttgatgtatt tgaatttata
     6541 aggttgaggt ggtaacccat tccaagcaaa ccaacgtgaa ccgtctttga gtgtaatttc
     6601 aatatcaacg acaactttgc caatatcgtg aac
//
LOCUS       DANLZQ010000122         6498 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.122, whole genome shotgun sequence.
ACCESSION   DANLZQ010000122 DANLZQ010000000
VERSION     DANLZQ010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6498)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6498)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6498
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.122"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            133..1455
                     /gene="pepP"
                     /locus_tag="PXE50_002297"
     CDS             133..1455
                     /gene="pepP"
                     /locus_tag="PXE50_002297"
                     /EC_number="3.4.11.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro aminopeptidase"
                     /protein_id="HDL5623155.1"
                     /translation="MDLAYLAKMPQEEFTARRERVLEQMQDNSALLVFTESEKRRNSD
                     SEYLFRPDSYFWYLTGLAEPKSAVLLVKSEGKTESIIFVRKKDPLMETWNGRRLGIEE
                     APKTLQLNAAFDIDDIETVLAKKLENLTACYCALGIQEWGDNILFATFEKMKVNRQKV
                     PTTLIDWQPMLSEMRLIKSEFEIALIQQACHISSMAHIRAMKQARPNRYEWEIEGEIQ
                     HEFSRFGARFPAYNSIVAGGENACILHYNENDQVLKGGDLLLIDAGAEFAYYAGDITR
                     TFPINGKFSEPQKELYELTLTMQKEAINLLVPNSSIKAANDKAVQILTQGLVRLGILN
                     GDVESLIEQKAYRQFYMHGLGHWLGLDVHDVGDYGTERDRPLQIGMVLTVEPGIYIPK
                     DADVPEQYKGIGIRIEDNLLITEYGNKNLSSGCPKEIADVEQLMQSLN"
     gene            1571..1756
                     /locus_tag="PXE50_002298"
     CDS             1571..1756
                     /locus_tag="PXE50_002298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1508 domain-containing protein"
                     /protein_id="HDL5623156.1"
                     /translation="MYFEIYKDAKEEFRWRLKAGNHEVIATNQAYTTKQGCQKGIEAV
                     KKVTPETEVKDLTKAEA"
     gene            1885..3201
                     /gene="argA"
                     /locus_tag="PXE50_002299"
     CDS             1885..3201
                     /gene="argA"
                     /locus_tag="PXE50_002299"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HDL5623157.1"
                     /translation="MQNTELALAQWFRQSTPYVNMHRGKTFVIMLDGDVIESPNFVNI
                     INDISLLHSLNIKLVIVFGARPQINQLLKQNHIEPEYYHNIRVTNPQSLEYVKQAVGK
                     VHYDFFARLSLRLPHSEVINVVSGNMILAQPIGVVDGVDYTLSGKIRRINIESIKQQL
                     AQNSIVLLGPIAPSVTGEMFNLPFEDIATQVAIKLRADKLIGFCEEQGILDENGKPIP
                     DYLPQDGETLLQQLIERGEYHTPKARFLQAAITVCREGVKRSHLLSYKEDGSLLQELF
                     SRDGIGTQFSMESSEQVRIANSSDIPGLLDLIRPLEQQGILVKRSREQLEMEITNYTI
                     IERDGVVIACAALNPYPEEKMAEMACVAVHPDYRDSSRGDILLENIQKRAVQLGMEKL
                     FVLTTRTTQWFQERGFRLAGAQDLPRYKRENYNYQRRSKVLILPLW"
     gene            3255..4142
                     /locus_tag="PXE50_002300"
     CDS             3255..4142
                     /locus_tag="PXE50_002300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL5623158.1"
                     /translation="MKKHQPIKGAMAIITAGVLFACINTLIPKLTSISPIDSNVIALV
                     QYLAAFIFLVPSMNNIGFFSSLKTEHFGQHCFRIFLSAIGIQCWTMALANQLPIWQGI
                     ALLMTSPLFVTIGSGLFLKEKVDKKRWIATAMGFVGAMIILEPWSDHFEMIALLPIAA
                     AFFWAGYSLMVKKLSRYDSPTTMVAYLFILITPFNLLIALTNLSPSGFSLPSWSDFGF
                     LILLGFFTALAQLAVAKAYSVADASYIQPFDFIKLPLNVLAGWLVFNWVPPGKLWLGA
                     AIIIAATIYITHAETKQSN"
     gene            complement(4221..4712)
                     /gene="ilvN"
                     /locus_tag="PXE50_002301"
     CDS             complement(4221..4712)
                     /gene="ilvN"
                     /locus_tag="PXE50_002301"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005647229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HDL5623159.1"
                     /translation="MRRTLAVLLENESGALSRVVALFSQRGFNIESLTVAPTDDPSLS
                     RMTIVAQGEEQVLEQIEKQLHKLIDVFKVSNLSAYEHVEREVLLVKVRATGSSRDELK
                     RMVDIYRGQIVDLTPKLYTIQLSGSTEKLNAFIEAVKEETTIVEIVRSGVISLSRGDK
                     NAL"
     gene            complement(4705..6426)
                     /locus_tag="PXE50_002302"
     CDS             complement(4705..6426)
                     /locus_tag="PXE50_002302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 3 large subunit"
                     /protein_id="HDL5623160.1"
                     /translation="MKKLSGAEMIVQSLKDEGVEYVFGYPGGSVLDIYDAIHTLGLNH
                     VLVRHEQGAVHMADGYARSTGKVGCVLVTSGPGATNTITGILTAYTDSVPLVILSGQV
                     PSSLIGTDAFQESDMIGISRPVVKHSFLVKNTEEIPEIIKKAFYIASTGRPGPVVIDI
                     PKDVVNPLNKYPYEYPQEVSMRSYNPTVQGHKGQIKKALKALLVAKRPVLYVGGGVIS
                     AEGSPEITEFAQKLNLPVTCSLMGLGAYPASDKQYLGMLGMHGTFEANNAMHESDLIL
                     GIGVRFDDRTTNNLAKYCPNAKVIHVDIDPASISKTVQAYIPIVGSAKDVMEEFLSLL
                     GEENLAKNQVDLTAWWQQIDAWKARNCLAFEENSDVIKPQQVIRMIHKLTNGEAYVAS
                     DVGQHQMFAALHYGFDKPRRWINSGGAGTMGFGLPAAMGVKFAHPDATVVCVTGDGSI
                     QMNIQELSTAKQYDTPIVIVSLNNRFLGMVKQWQDIIYSGRHSQVYMNSLPNFAKLAE
                     AYGHVGIQIDHPSELEAKLTEAFSIKDKLVFVDVLVDETEHVYPMQVRGGAMNEMMLS
                     KTERTDA"
BASE COUNT         1918 a         1271 c         1343 g         1966 t
ORIGIN      
        1 cttaatctgt tttgtttttg caatcaagat ctcaaatata atctttcatc tgttttggtt
       61 aggctgaatt tatgctgcgt ttgtgctaaa ataaggcagg tttcgatata gatataataa
      121 aaaggagaaa taatggatct cgcttatttg gctaaaatgc cacaagaaga atttaccgca
      181 cgccgtgagc gtgtgcttga gcaaatgcag gataattctg cgttattggt ttttaccgaa
      241 tcggaaaaac gccgtaatag tgactctgaa tacttgttta gacctgatag ttacttttgg
      301 tatttaaccg gtttggcaga acctaaatca gccgtattgc tggtaaaaag cgaaggtaaa
      361 acggaaagta ttatttttgt gcgtaaaaaa gaccctttaa tggaaacctg gaatggcaga
      421 cgtttaggga ttgaggaagc tccaaaaacg ttacagctta acgcagcttt tgatattgat
      481 gacattgaaa ccgttcttgc aaaaaaatta gaaaatctga ccgcttgtta ttgtgcgtta
      541 gggatacaag agtggggcga taatattttg tttgcaacat ttgaaaaaat gaaagtcaat
      601 cggcaaaaag tgccgacaac cttgattgat tggcagccaa tgttatcgga aatgcggttg
      661 attaaatcag aatttgaaat tgccttaatt cagcaggcgt gtcatatttc ttcaatggca
      721 catattcgag cgatgaaaca agctcgcccg aatcgttatg agtgggaaat tgagggggaa
      781 attcaacacg aatttagccg ttttggagca aggtttccgg catataattc aatcgttgcc
      841 ggcggtgaga atgcctgtat tcttcactac aatgaaaatg atcaggtgct taaaggcggc
      901 gatttattac tgattgatgc aggggcggaa tttgcgtatt acgccggcga tattacccga
      961 accttcccta ttaatgggaa attctccgaa ccgcaaaaag agctgtacga attaacctta
     1021 actatgcaaa aagaggcgat taatcttctt gtgccaaaca gctcgattaa agcggcaaac
     1081 gataaggctg tacagattct cacgcagggc ttggttcgct taggaatttt aaacggtgat
     1141 gtggaaagcc tgattgagca aaaagcctat cgccaatttt atatgcacgg attagggcat
     1201 tggctagggc tagatgttca cgatgtgggg gattacggca cggagcggga tcgtcctttg
     1261 cagattggta tggtgttaac tgttgaaccc ggtatctata ttcctaaaga tgcggatgta
     1321 ccggagcaat ataaaggtat tgggattcgg attgaagata atttgctgat taccgaatac
     1381 ggcaacaaaa acttaagcag cggttgccct aaagaaattg cggatgttga gcagttgatg
     1441 caatcgttaa attaattcgc aaatttttgt aaaaaaatga ccgcttgctt tgatattttg
     1501 gggaatttag cttaagctaa cccgacacaa acacagtgtt tgggcaatca caacacgaag
     1561 gagtgtttat atgtattttg aaatttacaa agatgcaaaa gaagaatttc gttggcgttt
     1621 aaaagcgggt aaccacgaag ttattgcaac caaccaagct tatacgacta agcaaggttg
     1681 tcaaaaaggc attgaagcag ttaaaaaagt tacacctgaa acagaagtaa aagatttaac
     1741 caaagctgaa gcataatcta taaagccctg atattatttc agggctttgt tatttatgca
     1801 aatataatgc ttaattattc aatttaaggc ttgcggattt ttctaaaaaa gataatatgc
     1861 gtttatatta taaagaggaa atatatgcaa aacacagaac tcgcattagc tcaatggttt
     1921 aggcaatcta caccttatgt taatatgcac agaggcaaaa cctttgtgat tatgcttgat
     1981 ggcgatgtta tcgaaagccc gaattttgtc aatattatca atgacatcag tctcctgcac
     2041 agcctgaata tcaaattagt gattgtattt ggggcaagac cgcaaattaa ccaattgtta
     2101 aaacaaaatc atattgagcc ggagtattac cacaatatcc gtgtgactaa tccacaatcg
     2161 ctagaatatg tgaaacaagc ggtagggaaa gttcattatg atttctttgc ccgcctttct
     2221 ttgcgtttac cccattctga agtgattaat gtagtcagtg gtaatatgat tttagctcag
     2281 ccgattggcg tggtggatgg ggtagattat acactaagcg gtaaaatccg tcgtattaat
     2341 attgagagca ttaagcagca actggcacaa aattcgattg tattacttgg tccgattgcc
     2401 ccgtctgtta ccggtgaaat gtttaatctg ccgtttgaag atattgccac acaggttgca
     2461 attaaacttc gtgccgataa attaatcggt ttttgtgaag agcaggggat tttagatgaa
     2521 aacggcaagc caattccaga ttatcttccg caagatggcg aaaccttgtt acagcagtta
     2581 atcgagcgtg gcgaatatca caccccgaaa gctcggtttt tgcaggcggc gatcacggta
     2641 tgccgagagg gagtgaaacg ctcgcattta ttaagctata aagaagatgg ctcattgctt
     2701 caagagttat tctctcgtga tggtattggc acacagttct caatggaaag ctcggaacag
     2761 gtacgtattg ctaattccag tgatattccg ggattattgg atttaatccg cccacttgaa
     2821 cagcagggca ttttagtcaa acgctctcga gaacaattag aaatggaaat cacaaactac
     2881 accattattg agcgtgatgg tgtggtgatt gcttgtgcgg cacttaaccc gtatccggaa
     2941 gaaaaaatgg cggaaatggc gtgtgtggcg gttcaccctg attatcgtga ttcctcaaga
     3001 ggggatattc tactggaaaa tattcaaaaa cgggcagtgc aactgggaat ggagaaactc
     3061 tttgtgctga ctacaagaac cacacaatgg ttccaagagc gaggatttag gctggcaggt
     3121 gcccaagatt tacctcgcta taaacgggaa aattacaatt atcaacgtcg ttctaaagta
     3181 ttaattttac cactttggta aaatattcaa tgtttttgac cgcttgttac caagagaact
     3241 ataaaaggag aactatgaaa aaacatcaac ccatcaaagg ggctatggca attattactg
     3301 ccggtgtgtt atttgcctgt atcaatacct taattcccaa attaacgtcc atttcaccga
     3361 ttgactcgaa cgtgattgca ttggtgcaat atttagctgc ctttattttc ctcgttccca
     3421 gcatgaataa tatcggtttc ttctcttcat taaaaaccga gcattttggg caacactgtt
     3481 tccgtatttt tctatctgcg attggtattc aatgttggac aatggcactc gctaaccaat
     3541 tacctatttg gcagggaatt gcgttattga tgacttctcc attgtttgtg accatcggct
     3601 ccggtctgtt tttgaaagag aaagtggata aaaagcgttg gattgcaacc gcaatggggt
     3661 ttgttggggc gatgattatt ctagagcctt ggagcgatca ttttgaaatg attgcgttac
     3721 tgccgattgc cgcggctttt ttctgggcag gttattcgct aatggtgaaa aaactctctc
     3781 gttacgatag cccaactacg atggtcgctt acctgtttat tctaattacg ccttttaatt
     3841 tgttgattgc actcacgaac cttagcccta gtgggtttag tctgccttct tggagcgatt
     3901 tcggcttttt aatcttactt ggtttcttta cggcgttagc gcaactggcg gtagccaaag
     3961 cctacagtgt agcagatgct tcctacattc agccgtttga ttttattaaa ttacctttga
     4021 acgtattagc cggttggctt gtatttaact gggtgccacc gggtaaatta tggctaggag
     4081 ctgcgattat tattgctgcg accatttata ttactcacgc tgaaactaaa cagagtaatt
     4141 agcaacaaat tcacgctaca taaaaatccc tttatctcaa agataaaggg atttgcaaat
     4201 tttaagctaa aattgaccgc ttacagagcg tttttatcgc cacgagatag actaatcacg
     4261 ccagagcgaa caatctctac aatcgttgtt tcttctttaa ctgcctcaat aaatgcattg
     4321 agcttctcgg tagaaccgga taattgaatg gtgtaaagtt tcggtgttaa atctacgatt
     4381 tgcccacggt aaatatctac catacgtttc agttcatcac gagatgaacc tgtagctcgc
     4441 acttttacca ataacacttc acgctcaacg tgttcataag cacttaagtt actcacttta
     4501 aacacatcaa tgagtttgtg tagttgcttt tcgatttgtt ctaacacctg ttcttcgcct
     4561 tgcgcgacaa ttgtcatacg ggaaaggctt ggatcatcag taggggcaac ggtcaagctt
     4621 tcaatgttaa aaccacgctg cgagaaaagg gcaactacac gagataatgc acctgattca
     4681 ttttctaata atacggctaa tgttctacgc atctgttctc tccgttttac ttaacatcat
     4741 ttcattcatt gctcctccac gcacttgcat tgggtaaaca tgttccgttt catcgaccaa
     4801 tacatcaaca aatacaagct tatctttaat tgagaatgcc tcagttaatt ttgcctccaa
     4861 ttcagaaggg tggtcgattt gaatcccaac gtggccataa gcctctgcta atttagcaaa
     4921 gttaggtaga gaattcatat acacctgtga atggcggcca gagtaaataa tatcttgcca
     4981 ctgtttcacc atacctaaga aacggttatt taagctgaca atcacaatcg gtgtgtcgta
     5041 ttgctttgcg gtggaaagtt cctggatatt catttggata ctaccatcac cggttacaca
     5101 aacaacagtg gcatcagggt gggcaaattt tacccccatc gcagcaggta agccaaagcc
     5161 cattgtgcct gcaccgcctg aattaatcca acgacgtggt ttatcgaacc cataatgcaa
     5221 tgcagcaaac atttgatgtt gtccaacatc tgaggcaaca taagcctccc cattggtcaa
     5281 cttgtggatc attctaatca cttgttgtgg cttaatcaca tcactgtttt cttcaaaggc
     5341 taagcaatta cgagctttcc aagcatcaat ttgttgccac caagcggtta aatctacctg
     5401 attttttgca agattttcct cacctaataa agataaaaat tcttccatta catccttagc
     5461 actgcctaca attggaatat aagcttgtac tgttttggaa attgaggctg gatcaatatc
     5521 cacgtggatc acttttgcat tcgggcaata ttttgctaag ttatttgttg tacgatcatc
     5581 aaaacgtacc ccaataccta aaatcaaatc actttcgtgc attgcattat ttgcctcaaa
     5641 agtgccgtgc atgcctaaca tacctaaata ttgcttatca gaggcaggat aagcacctaa
     5701 tcccattaat gaacaggtta caggtagatt tagcttttgt gcaaactctg taatttctgg
     5761 cgaaccctct gcactaatta caccaccgcc tacataaagc actggacgtt ttgctactaa
     5821 tagtgctttt aatgcttttt taatttgccc tttatgccct tgaactgttg ggttataaga
     5881 acgcattgat acttcttgcg gatattcata gggatattta tttaatggat tgactacatc
     5941 tttaggaata tcaataacta ccgggcctgg tcgaccggtt gatgcaatat aaaaggcttt
     6001 tttgataatt tcaggaattt cttctgtatt ttttactaag aaactgtgtt ttacaaccgg
     6061 acgagaaatg ccgatcatat cactttcttg gaatgcatct gtcccaatta aacttgatgg
     6121 aacttggccc gacagtatta ctaacggaac agagtcggta taagcagtta aaataccagt
     6181 aattgtattc gttgctcccg gacctgaagt cactagcaca cagccgactt tacctgttga
     6241 acgggcatag ccatcagcca tatgtacagc accttgctcg tgtcgaacta aaacgtgatt
     6301 caatccaagt gtatgaattg catcataaat atcgagtaca gagccacccg gatagccgaa
     6361 aacgtattct acgccttcat cctttaagga ctgtacaatc atttctgcac cagaaagttt
     6421 tttcattgaa tcctccaaca aaatagcatt ttcttctcta agatggttgg attttgcagt
     6481 aaaattttat tgatgtct
//
LOCUS       DANLZQ010000123         6424 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.123, whole genome shotgun sequence.
ACCESSION   DANLZQ010000123 DANLZQ010000000
VERSION     DANLZQ010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6424)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6424)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6424
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.123"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            101..1075
                     /locus_tag="PXE50_002303"
     CDS             101..1075
                     /locus_tag="PXE50_002303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015586968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDL5623161.1"
                     /translation="MHFYIISDDLTYKSISLEGINSKFSWLTLNNKSDSILFVESTWQ
                     GYKNRWKYKIASYPDHPKRTNQKLLRLVEKAKDKGIPTVFWNKEDSIHFDRFIDSAKH
                     FDHIFTVDQNAIARYREVVPDTTTVNVGMFPVQPRIHNFQGFNFKHLAANFVGSYSHH
                     IHNKRRERQDMLFGAALKAGLPVTIFDRNSDRKSENYRYPKNSFNLNVQPAVSYTETA
                     NIYRDYLVSLNINTVEDSPTMFSRRVVEILACGGILVSTPSMAIDNIFKEYCHIVQSE
                     DEAIELFQRLKRGASRDDLNKAIAGSEFVLSNFTWEHFLSQIQKVVYR"
     gene            1180..2364
                     /locus_tag="PXE50_002304"
     CDS             1180..2364
                     /locus_tag="PXE50_002304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide export protein"
                     /protein_id="HDL5623162.1"
                     /translation="MKQKKLNTTLLFITLSLISACSSLPTSGPSYSEILASNENTAET
                     QLPEVNLIKLDNITVQNLYQEQQSQRFSGFDGSMGVGGYAGTVNVGDILEISIWEAPP
                     AVLFGGTFSAEGQGNGHLTQLPQQMVNKNGTVTVPFIGNIKVAGKTPEVIQNQIVGAL
                     SRKANQPQALVRIANNLSSDVTVIRQGNSIRMPLSANNERILDAVAAVGGTSENIEDV
                     TVRLTRGNKVRSMAFETLIADPSQNITLRSGDVIALMNTPYSFTGLGAVGNNQQMRFS
                     SKGITLAEAIGKMGGLIDERSDPRGVFVFRHIPFTQLDYTSQAHWREKGYYEGMDIPT
                     VYQVNLLEPQSIFLLQRFPIQDKDIVYVSNAPLSEFQKFLRMIFSITTPITGTANTIR
                     AY"
     gene            2436..3539
                     /locus_tag="PXE50_002305"
     CDS             2436..3539
                     /locus_tag="PXE50_002305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HDL5623163.1"
                     /translation="MSKKKKHFLANPLLWLTVIIPTACSGIYYSLFASDIYVSESSFV
                     VRSPNNQSSLTGVGALLQNSGFARSQDDTYSVQEYMRSRTALEQLEAEIPVKRFYSEQ
                     GDLLSKFNGLGFNDTQEAFYRYFKERLNIDVDSISGIATLRVRAFNAEEGQKINENLL
                     QQGETLINRLNERARQDTVEFAEERVKEAEKDVNNTALALSQYRTKNKIYDLPAQSSV
                     QLSLISTLKSELIRVETQLAQLKSITPDNPQVAALQMRQKSLKKEIDDQSKQLAGGNT
                     SVATQTAEYQRLVLANELAQQQLAAAMTSLQNTRGEADRQQLYLEVIGRPSKPDWALE
                     PYRIYNIISTFFIGLILFGVLSLLLASIREHKN"
     gene            3539..4336
                     /locus_tag="PXE50_002306"
     CDS             3539..4336
                     /locus_tag="PXE50_002306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_157140410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5623164.1"
                     /translation="MRYGDNTTFKRSCVIQKRVIHALLMRELITRYGRKNIGFLWLFI
                     EPLLLTLVITVAWKYIKADKFSTLNIIAFMITGYPIAMMWRNASNRAQGAISANLSLL
                     YHRNVGVLDTIFTRVLLEVTGASIAQILLMTIFIAIGWIEMPNDIFYMLCAWILMAFF
                     ALGLGLIICTLAHYIEPFGKIWGTFSFFLLPLSGAFFFVHNLPLTAQNIALWFPMIHG
                     TEMFRHGYFGETVITYESISYLIVSDIILLFIGLLCVRSFSKGIEPR"
     gene            4333..4980
                     /locus_tag="PXE50_002307"
     CDS             4333..4980
                     /locus_tag="PXE50_002307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015702020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5623165.1"
                     /translation="MISIRNVSKQYRTNNGWKTILKDINFELKKGEKVGILGRNGAGK
                     STLIRLMSGVEPPSTGTIERQMSISWPLAFSGAFQGSLTGMDNLRFVSRIYGADFDYV
                     KSFTEEFSELGEYLYEPVKNYSSGMKARLAFALSLSIEFDCYLIDEVIAVGDARFAAK
                     CKYELFEKRKDRSLILVSHSPASIKEYCDSAMVLEEGIMYTFDSIDNAYNFYNKT"
     gene            complement(5063..5692)
                     /locus_tag="PXE50_002308"
     CDS             complement(5063..5692)
                     /locus_tag="PXE50_002308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HDL5623166.1"
                     /translation="MDFSKILSQVLDTAKDAATNGLIKGNSKNDQIAKIGGGAAAIGL
                     ISMLFGRNGGSSLAKLGSLAALGSLAYQAYQKYQAQNASASELSQNSFENVDKNVASK
                     VILQAMIAAAASDGAITEEEKAAIISQVGDDVEVIEWIRQEMDSPASVEEIARQVGND
                     QALATQVYLAARAVCTNLERKEIVFLANLAEALGLAEALVEQLEKDAGF"
     gene            complement(5764..6225)
                     /locus_tag="PXE50_002309"
     CDS             complement(5764..6225)
                     /locus_tag="PXE50_002309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HDL5623167.1"
                     /translation="MTACPCQTGKRYAECCQPFHLKQAFASTAEQLMRSRYSAYTLIN
                     IPYIVETTVPSQQKLLDQTAMKEWAENTKWVGLSVLNHLPSLSKIHSQVEFKAFFDTD
                     EGIQAHHETSLFVQIDKRWFFVDPTVPLPHQKQPCVCGSGKKFKHCCGNYL"
BASE COUNT         2072 a         1104 c         1176 g         2072 t
ORIGIN      
        1 ctgctgcact ttcttctaga tctatatttt tattaagtat ttttttagtt ttgagtgtag
       61 gtatattttc cataaagaag attattagaa actaatttag atgcattttt atattattag
      121 tgatgattta acttataaat ctatttcact agaaggtatc aactctaaat tctcctggtt
      181 gacgttgaat aacaaatcag attcaatatt atttgtagaa tctacttggc aaggctacaa
      241 aaaccgttgg aaatacaaaa tagcatctta tcctgaccac cccaaacgaa ccaatcaaaa
      301 attgttgcgt ttggtggaaa aagcaaaaga taaaggtatt ccaacggtat tttggaacaa
      361 ggaagattcc atacatttcg accgatttat tgattcagcg aagcattttg atcatatatt
      421 tactgtagat caaaatgcta ttgctcgtta tagagaggtt gtacctgata caaccactgt
      481 caatgtaggt atgtttcctg ttcagccaag gattcataat tttcaaggat ttaattttaa
      541 gcaccttgcc gcaaattttg tagggagtta cagtcatcat atccacaata agcgtagaga
      601 aagacaggat atgttgtttg gtgcagcact taaagcaggt cttccggtaa ccatctttga
      661 tagaaactct gatagaaaat cggaaaatta tcgttaccca aaaaatagct ttaatttaaa
      721 tgttcaacct gctgttagtt atactgaaac tgctaatatt tatcgtgatt atcttgtttc
      781 tttgaatatt aatactgtcg aagattcccc tacgatgttt tctcgcagag tcgttgaaat
      841 attagcttgt ggaggaatat tagtctctac accaagtatg gctatcgaca atatatttaa
      901 agaatattgt catatcgtac aaagtgaaga tgaggctata gaattattcc aacgtttaaa
      961 acgaggtgct tctcgtgatg atttgaataa agcgattgca ggctctgaat ttgtattgag
     1021 taactttact tgggaacatt tcttatccca aatacagaaa gttgtatata ggtaacttaa
     1081 atagcattat taaaaactct ctgccaagaa attattttct attaggggaa atttagtcta
     1141 gttatttagg atgaatccaa attaattata ggtactataa tgaaacaaaa aaaattaaat
     1201 actacattat tatttataac attatcatta atttcagcct gctctagcct accaacgtcc
     1261 ggcccaagct atagcgaaat cttagcaagt aatgaaaata cagctgaaac gcagttgcct
     1321 gaagtcaatt taatcaagtt agataacatc accgtacaaa acttatacca agagcaacaa
     1381 tctcaacgtt tttcaggatt tgatggctca atgggtgtgg gtggttatgc tggaacagtt
     1441 aatgtaggcg atatattaga aatatccatt tgggaagcgc cacctgccgt gctatttggt
     1501 ggaacattta gtgctgaagg gcaaggtaat gggcatttaa cccaattacc tcagcaaatg
     1561 gtgaacaaaa atggaacggt aactgtgcct tttatcggta atattaaagt tgctggaaaa
     1621 acacctgaag taattcagaa tcaaattgtc ggagcattga gccgtaaagc taatcaacct
     1681 caagcattag ttcgtattgc gaataacttg tcgtctgatg ttacggttat ccgccaagga
     1741 aatagcattc gtatgccatt aagtgccaat aatgagcgta ttttagatgc agttgcggca
     1801 gtaggtggta caagcgaaaa tattgaagat gtaacagttc gtttaacacg tggaaataaa
     1861 gtgcgttcaa tggcgtttga aacattaatt gctgacccct cacaaaatat tacattacgt
     1921 tcaggtgatg ttattgcttt aatgaatact ccttatagct ttaccggatt aggagcagta
     1981 ggtaataatc aacaaatgcg tttttcaagt aaaggcatta cccttgctga agctatcggt
     2041 aaaatgggag gattaattga tgagcgttca gaccctcgtg gtgtgttcgt attccgccat
     2101 attcctttca cccagttaga ctatactagt caagctcatt ggcgagaaaa aggctattac
     2161 gagggaatgg acattccaac cgtttatcag gtaaatttat tagaaccaca atcaattttt
     2221 ttattacagc gtttccctat tcaagataaa gatattgtgt atgtgtcgaa tgctccactg
     2281 tctgaatttc aaaaattctt gagaatgatt ttctccatta caacgccaat tacaggtaca
     2341 gctaatacaa ttagagcata ctaattagct catagataaa atggtaaaaa atcattaaaa
     2401 aatgaccgct tgtaacactt ttcgttgagg attttatgtc aaagaagaaa aaacattttt
     2461 tagctaaccc tttgttgtgg ctaactgtaa ttattccaac tgcttgttct ggaatttatt
     2521 attccttatt tgcctctgat atttatgttt cagaatctag ctttgtggtt cgttcgccca
     2581 ataatcaatc gagcttaaca ggcgttggtg ctttattgca aaactccggt ttcgcccgtt
     2641 ctcaagatga tacctattca gttcaggaat atatgcgttc ccgtaccgca ttagaacaac
     2701 ttgaagcaga aattccggta aagcgttttt atagtgagca aggtgattta ctaagcaaat
     2761 ttaacggttt aggatttaac gatacccaag aagcatttta tcgttatttt aaagaacgtc
     2821 tgaatattga tgtcgattct atttcaggta ttgcaacgct acgcgttcgt gcttttaatg
     2881 cagaagaagg acaaaaaatt aacgagaatt tattacagca aggggaaaca ttaattaacc
     2941 gccttaatga aagagcaaga caagatacgg ttgagtttgc agaagagcgt gtaaaagagg
     3001 ccgaaaaaga cgtcaataat actgcgttag cattaagcca atatcgaact aaaaataaaa
     3061 tttatgattt accggcacaa tccagcgttc agctctcatt aatttctacc ttaaaaagtg
     3121 aattaattcg ggtagaaaca caattagcac aattgaagtc aattacgccg gataatcctc
     3181 aggtagccgc attacaaatg cgtcaaaaaa gtttgaaaaa agaaattgat gatcagtcca
     3241 aacaacttgc aggaggtaat acttctgtag caacgcaaac tgctgaatat caacgtttgg
     3301 ttcttgctaa cgaattagct cagcaacaac ttgcagcagc aatgacttca ttacaaaata
     3361 cacgaggtga agctgatcgc caacaacttt atttagaggt aattggtagg ccaagcaaac
     3421 cagattgggc attagaaccc tacagaattt ataatattat atcaactttt tttatcggct
     3481 taattctatt tggagtatta agtttgttac tagcaagtat tagagagcat aaaaactaat
     3541 gcgatatggt gataatacaa cctttaaacg ttcctgtgtg attcaaaaac gggtgattca
     3601 cgccctttta atgagggaat taattactcg ttatgggcgt aaaaatattg gcttcttatg
     3661 gctttttatc gaaccattat tgttaacgtt agtgattact gttgcttgga aatatataaa
     3721 agcagataag ttttcaactt taaatattat cgcttttatg attacaggct accctatcgc
     3781 aatgatgtgg agaaatgcct ctaatagagc tcaaggagca atatcagcaa acttaagttt
     3841 gctttaccac agaaatgtgg gagtgctaga tacgatattt actcgagttt tattagaagt
     3901 tactggcgca tctatcgccc aaattctctt aatgactata tttatcgcta ttggttggat
     3961 agaaatgcct aacgatattt tctatatgct ctgtgcttgg atattaatgg cattttttgc
     4021 cttaggttta ggtttaatta tctgtacttt agcacattat attgaacctt ttggtaagat
     4081 ttggggaaca ttcagcttct ttctacttcc tctttctggt gcattcttct ttgtccataa
     4141 tttaccgcta actgctcaaa atattgcctt atggtttcca atgattcatg gtacagaaat
     4201 gtttagacat ggttattttg gtgaaacggt aattacctat gagagcatta gttatcttat
     4261 agtaagtgat attattcttc tatttatagg actgctttgt gtgagaagtt ttagtaaagg
     4321 gatagaacca agatgattag tattagaaat gtaagtaagc aatatcgaac taataacggt
     4381 tggaaaacca tattaaaaga tataaatttt gagctgaaaa aaggcgaaaa agtggggatt
     4441 ttagggcgga atggtgcagg aaaatcaacc ttaatccgtt taatgagcgg ggtagaaccc
     4501 ccatcaacag gcacaataga acgccaaatg tctatttctt ggcccctagc gtttagcggt
     4561 gctttccaag gaagtttaac cggtatggat aacctacggt ttgtaagtag aatttatggt
     4621 gcagattttg attatgtaaa atcatttacc gaagaatttt ctgaactcgg ggaataccta
     4681 tatgagccgg tcaaaaacta ttcttctggt atgaaagcaa gactcgcttt tgctttatct
     4741 ctctctattg aatttgattg ttatttaatt gacgaagtaa ttgctgtggg cgatgcccga
     4801 tttgcagcaa aatgcaagta tgagcttttt gaaaaacgga aagaccgttc attgatttta
     4861 gtttctcata gcccagcctc aattaaagaa tattgcgatt ctgcaatggt tttagaagag
     4921 ggtatcatgt atacatttga ttctattgat aacgcataca atttttacaa taaaacataa
     4981 aaaagaacaa gcggtcatat ttcacaagtt tttcgcaaaa aactctcaaa atataaccgc
     5041 ttgttactaa aaataagcaa aattaaaagc ctgcatcttt ttctaattgt tccactaaag
     5101 cctctgctaa ccctagagct tcagctagat tagctaagaa aactatttct ttgcgttcta
     5161 aattggtaca tactgcccgg gcagctaagt aaacttgagt agctaatgct tgatcattac
     5221 ctacttgacg agcaatctct tcgactgaag ctggggaatc catttcttga cgaatccact
     5281 caattacttc tacatcatct ccaacttgag aaatgatagc tgctttttcc tcttcagtaa
     5341 tagcaccatc tgaagcggca gcggcaatca ttgcttgtaa aatcacttta cttgctacat
     5401 ttttatcaac attctcaaaa ctattttggc ttaactctga tgctgatgca ttttgtgctt
     5461 ggtatttttg atatgcctga taagcaaggc tacctaaagc agctaaagag cctaatttcg
     5521 ctaaacttga accgccatta cgcccaaata acattgaaat taaaccaata gcggcagcgc
     5581 cgccaccaat tttagcgatt tgatcgtttt tagaattacc tttaattaat ccgtttgtag
     5641 cagcatcttt tgctgtatct aatacttgac ttaaaatctt actgaaatcc atttttgttc
     5701 ctcttggtaa gtaaatgaaa tttactcatt agtccttaga ttcaaacaag agttcaattc
     5761 aaattaaaga taatttccac aacagtgctt aaacttcttt ccggaaccac atacacaagg
     5821 ttgtttttga tgaggcaaag gtacggtggg atcaacaaaa aaccatcgct tatcaatttg
     5881 aacaaaaaga gaggtttcgt ggtgtgcctg tatcccctca tctgtatcaa aaaaggcttt
     5941 aaattcaacc tgactatgta ttttcgaaag agaaggtaag tgatttagca cggataatcc
     6001 tacccatttt gtattttcag cccactcttt cattgcagtc tgatcaagta atttctgctg
     6061 acttggcact gtcgtttcca caatataggg aatattaatc aaagtataag cactgtaacg
     6121 ggaacgcatt aattgctctg ccgttgatgc aaatgcctgt tttaaatgga aaggttggca
     6181 acattcagcg tagcgtttgc ctgtttggca aggacaagcg gtgatttttt tctaacattt
     6241 ttacatttcc gcataaaaat aaagatgtga aaagtttacg ctataaataa agaaaaataa
     6301 attttataaa aaagcgtgac ataccccttg tggataactt atgcaaaaag cgtgaatttt
     6361 ttgggtattc attgctttaa aaagccttta ttctatagat tgtggataac ttaagatttt
     6421 atcc
//
LOCUS       DANLZQ010000124         6417 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.124, whole genome shotgun sequence.
ACCESSION   DANLZQ010000124 DANLZQ010000000
VERSION     DANLZQ010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6417)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6417)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6417
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.124"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            410..910
                     /locus_tag="PXE50_002310"
     CDS             410..910
                     /locus_tag="PXE50_002310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623168.1"
                     /translation="MNNHYIIGYVGDNLERYQYNKSQLKSIVLMHEEIKNIVDKGILN
                     KVKKPMWFIFFPTSILLFIVMVKFNSLLSGIMLFLTMLIAYCNTKYWYFRTIRMKLSH
                     FMELMPAKEIINNSETKNILVIIEKCTFMNQKDEHIVDLDSIATGLNIIIRYNKFNHQ
                     FSAYKQ"
     gene            922..1179
                     /locus_tag="PXE50_002311"
     CDS             922..1179
                     /locus_tag="PXE50_002311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623169.1"
                     /translation="MNNKQILSIAQKFRQNHKDSHPFMLERGYVRIYQGKAYGWCAEQ
                     EDANTECPTALIVSLSNEIFEATGGDDISGAEKWEKYNSNF"
     gene            complement(1339..1581)
                     /locus_tag="PXE50_002312"
     CDS             complement(1339..1581)
                     /locus_tag="PXE50_002312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623170.1"
                     /translation="MFNLNLFKRPIELSTLESWSKFCDDVGKVAFIAIPPMIYSNYDL
                     CIKIGNISALLAITYGFLLSGRTIRQFIEKEKSRWD"
     gene            complement(1658..1855)
                     /locus_tag="PXE50_002313"
     CDS             complement(1658..1855)
                     /locus_tag="PXE50_002313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623171.1"
                     /translation="MTKSTEIPRGHDNWVITGRDNDGKWHKERFLYYSRREAIQQFRR
                     KHNCVGKHSVIESITPQFGWY"
     gene            complement(1942..2916)
                     /locus_tag="PXE50_002314"
     CDS             complement(1942..2916)
                     /locus_tag="PXE50_002314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1738 domain-containing protein"
                     /protein_id="HDL5623172.1"
                     /translation="MNTQPKFDLYQHITDRIVVALEQGTAPWLKPWSHPECNMALPRN
                     AVSNRLYSGINTLLLWIATAEHGYKQCKWITAKKANELGGYIRKGEKATVVMNYRPDE
                     REKLDEEGNIVYDEEGNPEMERHFFINKHNLFNLDQCENLPVELYDPVSEPKQPKSEP
                     NQYDIFAEIRQIIKGMDLQVEMKPSNRAFYQPGEDKVVMPEMKQFANAQAFHSVLLHE
                     MTHATGANNRLNREGITSGKAKFGNKVYAFEELIAEMGGAFLCAYLGFDTVPQNAAYI
                     ESWIRVLKEDKRAIVRASGKAREACQYMLDALNVAQLADKYDVFEEAA"
     gene            complement(2996..3151)
                     /locus_tag="PXE50_002315"
     CDS             complement(2996..3151)
                     /locus_tag="PXE50_002315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623173.1"
                     /translation="METRIVKVIYDDGDYFFTRINADEQAIRNYYAIGSSIGFDDIRK
                     IIAVEIL"
     gene            complement(3165..3577)
                     /locus_tag="PXE50_002316"
                     /pseudo
     CDS             complement(3165..3577)
                     /locus_tag="PXE50_002316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484619.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
     gene            complement(3692..4468)
                     /locus_tag="PXE50_002317"
     CDS             complement(3692..4468)
                     /locus_tag="PXE50_002317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623174.1"
                     /translation="MNIEYSLNHCQGDGVAFYGRLGTDDLIQLFNHLNPQKRKQKMFA
                     NLLTHIESWETHDDIGFEIIRNRFGYRYSHWNTMELYAKTADQLVFFNDSDARRNWYF
                     PTSKVYKYKGLWDEFIQDLEQYIKGTSREMESVGYQIIEASPYQTETVFKFNTENYLV
                     ELKRKPSEFYSELVDWAFGDMCDFEATIEQICQGQLCYADFEATVTDKKSEIQLGLAR
                     LSGISYSPNDRSFSGYRQELIGEAIASARHNAARFAYLHA"
     gene            complement(4465..4671)
                     /locus_tag="PXE50_002318"
     CDS             complement(4465..4671)
                     /locus_tag="PXE50_002318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623175.1"
                     /translation="MVKNVVHEEILHNRAELQQAVEKEEFCAKCDNSVVFHLRDNYHE
                     FTLGLDTILQCLHFAEEKGAIRIP"
     gene            complement(4687..4833)
                     /locus_tag="PXE50_002319"
     CDS             complement(4687..4833)
                     /locus_tag="PXE50_002319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623176.1"
                     /translation="MDTTQKRVALFIIGLSVVMWLRKHNCCTVIFVLLLAALAFSYTM
                     EHLY"
     gene            complement(4837..5013)
                     /locus_tag="PXE50_002320"
     CDS             complement(4837..5013)
                     /locus_tag="PXE50_002320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623177.1"
                     /translation="MAYVRIYQGEAYGWCAEKGEANTECPEALLVSLTGDIFEAVGGD
                     KLKGAKKWQPYKKE"
     gene            5027..5284
                     /locus_tag="PXE50_002321"
     CDS             5027..5284
                     /locus_tag="PXE50_002321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623178.1"
                     /translation="MICHADPEYVKYNYAGLWEKGSDGTFFYNYQQFMPEVEAKESLR
                     EQEPELDDGYNEEEYSEEEYSDENDASDENDNYDETYDDNF"
     gene            5422..5577
                     /locus_tag="PXE50_002322"
     CDS             5422..5577
                     /locus_tag="PXE50_002322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623179.1"
                     /translation="MLFKEKGYDEFLTQKIAKGRAELESGKGIPLEQATLLVQSTIEE
                     TAQELDD"
     gene            5631..5789
                     /locus_tag="PXE50_002323"
     CDS             5631..5789
                     /locus_tag="PXE50_002323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623180.1"
                     /translation="MTEEYQNFLIEQVKQGLDDIENGRVISLEESRQLCQKTIYETLQ
                     ELQGAVYA"
     gene            5782..6099
                     /locus_tag="PXE50_002324"
     CDS             5782..6099
                     /locus_tag="PXE50_002324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5623181.1"
                     /translation="MLSRKEVLMTRRASMNLQQIIRNVVEYTYSYESGDKLSAEIHNT
                     LDNLSYFPRIGVIGSVENTRECFCRGYRIIYRETENQVQILAIIHCRQQYPTDYYRSA
                     FKA"
     gene            6220..>6417
                     /locus_tag="PXE50_002325"
     CDS             6220..>6417
                     /locus_tag="PXE50_002325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623182.1"
                     /translation="MSLLKKAQTFISIFNEVRAKNEAQRQSSNNLNVALKNAAEMRAE
                     MNGFSLKPQKRSTYFADHYGCG"
BASE COUNT         2106 a         1249 c         1113 g         1949 t
ORIGIN      
        1 cttatccccc ttaggggatt acccttgccc gttagggccc cttacccttt tgccatttag
       61 aggctttttt ctctgaacca aatttaactt cgagtattga accaaaattt agttggtatc
      121 agtagaaaaa actctctgaa tatgttggag aattttttat tagtgatgtt gaattgcgag
      181 attacaatac acgaatgata gtaaccagat aactttgata tatatgttta ttgggcactt
      241 aaaatattaa cttttaaaaa tgggtgaaaa atgaatgaca atataaaata tatagtaatg
      301 tttattacac tgtaattttt atttattgtt atatctatat cgatcattgt aatcataaat
      361 ttcatattta acgacaaaaa agaacctgtt cgaaactaaa ggggcaaaaa tgaataatca
      421 ttatataata ggttatgttg gcgacaactt ggaacgttat cagtataata aatctcaatt
      481 aaaatcaatc gttctgatgc acgaagagat caagaatata gttgataaag gaattttaaa
      541 taaagtaaaa aaaccaatgt ggtttatttt ctttccaaca tcaatattat tatttatagt
      601 aatggtaaaa ttcaattcat tattatcagg aataatgcta tttcttacaa tgttgatagc
      661 atattgcaat actaagtatt ggtacttcag aacaataaga atgaagttat ctcactttat
      721 ggagctaatg ccagcaaaag aaataataaa caattcagag accaaaaaca ttttagttat
      781 tatagagaaa tgtacattta tgaaccaaaa ggatgaacac atagtcgatt tagacagtat
      841 agcaacagga ttgaatatta taattagata taataaattc aatcatcaat tttcagcata
      901 taagcaataa gaaaaataat tatgaacaat aaacaaattt tgtctattgc tcaaaaattt
      961 cgtcaaaatc acaaggattc tcaccctttt atgctagagc gtggttatgt tcgtatttat
     1021 cagggaaaag cctatggctg gtgtgcagag caagaagatg caaacacgga atgccctacc
     1081 gccttaattg tcagcttatc taatgaaatt tttgaggcaa ctggaggtga tgatataagt
     1141 ggggctgaaa aatgggaaaa atataattct aatttttaat taggataaga atgaaatacg
     1201 gcaccaaatg tgccgtattg agtgtaaagt tgagctattt ttttagctgt ttaaggcgtt
     1261 catcttgctc tttgagtaag ctatttgccc aaaaaaccag tgcaaagcct ataaaagcaa
     1321 tgatccataa gccgattgtt aatcccatct tgatttctcc ttctcaataa attgacggat
     1381 agtcctgcct gataataaga atccataggt aattgccaat aaagcactta tgtttcctat
     1441 tttgatacat agatcataat tactataaat catcggaggt atcgcaataa atgcaacttt
     1501 accgacatca tcacagaatt tagaccaaga ttcaagcgtt gaaagctcaa tagggcgttt
     1561 aaataagttt agattgaaca ttgtgtcctc tagttaagtg aataaaaagg gagacacaat
     1621 gctccgaagg gagagtatct ccccacggga aagccggtta ataccagcca aattgaggtg
     1681 ttattgattc aataacacta tgtttaccta cgcagttgtg ttttcgacga aactgttgga
     1741 tggcttcacg gcgagaataa taaagaaaac gttctttatg ccatttccca tcattgtctc
     1801 tgcctgtaat aacccagtta tcatgtccac gaggtatttc agttgatttt gtcatagctt
     1861 ttctccattt aataaaaaat agggaaacac tatgcccaaa gggataggtc tccccttgag
     1921 atatgccttt cggcaaattt gttaagcagc ttcttcaaat acatcgtatt tgtcagccaa
     1981 ctgtgcgacg tttaatgcgt ctaacatgta ttggcaggct tcacgagctt ttccggaagc
     2041 acggacaatc gcccgtttat cttctttcaa tactcgaatc caactttcaa tatacgccgc
     2101 attttgaggc acagtatcaa aaccaaggta ggcacataaa aatgcaccgc ccatttcagc
     2161 aatcaactcc tcaaaagcat agactttgtt tccaaattta gcctttccgg aagtaatacc
     2221 ttcccgatta agccgattat ttgcccccgt tgcgtgagtc atttcgtgta acaatacact
     2281 atgaaacgct tgagcatttg caaactgctt catctccggc attacgacct tatcttcacc
     2341 tggttgataa aatgcccgat tgctaggctt catttccacc tgcaaatcca ttcctttgat
     2401 aatctgccga atctcagcaa aaatatcgta ttggtttggc tcagatttag gttgtttcgg
     2461 ttctgataca ggatcgtaca gttccaccgg taaattttca cactggtcca gattgaacag
     2521 attgtgctta ttaatgaaaa agtgtcgttc catttccgga tttccttcct cgtcatacac
     2581 aatattccct tcctcatcga gtttctctct ctcatcagga cggtagttca tcaccacagt
     2641 agctttttcc cctttacgga tatatccgcc gagttcattg gctttttttg ctgtaatcca
     2701 cttgcactgt ttgtaaccat gttcagcagt agcaatccag agtaagagtg tattgatacc
     2761 ggaatacaag cggttagata ccgcattgcg aggtaatgcc atattgcatt ccggatggct
     2821 ccacggtttt aaccacgggg ctgtaccttg ttccagtgct acaacaattc ggtcagtgat
     2881 gtgttggtat aaatcaaatt taggttgagt gttcataagt gtttctccaa agttcgggta
     2941 gaaaaatggg gaaacgctat caccctatgg ggaaatagtt tcccctatgg gtggtttata
     3001 aaatttcaac agcgataatt tttcttatat catcaaaacc tattgaactg cctatggcgt
     3061 agtaattacg gatagcctgt tcatcagcat tgattcgggt aaagaaataa tcaccatcat
     3121 cgtaaataac tttaacaatg cgagtttcca ttatctcacc tccattaaag caaacgttga
     3181 aaacaatttg cagctctgaa gttataactt ttctcggctg cttcagtttc agtaatcatt
     3241 ccctgttcca gtaaaatata ggctatcccc tgatagaact ggtgcagtaa atatgagatg
     3301 aagcctgttg tttcaacttt tatcggacga caatggtatt attgtcatac cacattttga
     3361 tgtcatcctt gagcttttga gattccacaa ctcgatatac aacgtctgac acgttgatta
     3421 agttgccgtg aaaattaagc caaatcgtat aacgattcca atctcctttt ttcatcggct
     3481 caatgcaaat gtgaaacagg tattgatagg ctttattttc aaggttgcgg ttatcccaaa
     3541 tatatttaag ttgctctaaa ttgtgttcat ttttcatcac atttctccaa attaaaaagt
     3601 ggagaaacat cttgcccaat agggaaaata tttccccacg gggtgaaaat taaccactac
     3661 aagcggtcaa attgaagtac aaatctgcaa attaggcgtg caagtaggca aaacgtgctg
     3721 cattatggcg agcagaggca atcgcctcac caataagctc ttgtcgataa ccactaaacg
     3781 aacggtcatt cggcgagtaa cttattccac tcaagcgagc aagacctaac tgaatttcac
     3841 ttttcttatc ggtaacagtt gcttcaaaat cagcataaca gagttgccct tgacaaatct
     3901 gctctatagt tgcttcaaaa tcacacatat caccaaatgc ccaatcaaca agctctgaat
     3961 aaaactcaga aggtttacgt ttcagttcta ctagatagtt ttccgtatta aatttgaaaa
     4021 cggtttccgt ttgatacggc gaggcttcaa taatttgata accgaccgat tccatttcac
     4081 gggaagtacc cttaatatac tgttctaaat cctgaataaa ctcatcccac aagcctttgt
     4141 atttatacac ttttgaagtc ggaaaatacc agtttcttcg agcatcacta tcattgaaaa
     4201 acactaactg atctgcagtt ttagcataaa gctccatcgt attccaatgc gagtaacgat
     4261 acccaaagcg atttcgtata atttcaaaac caatatcatc gtgggtttcc caagactcaa
     4321 tgtgcgttag caaattagca aacattttct gtttacgttt ctgtggattg agatgattga
     4381 aaagctggat tagatcatct gtaccaagtc gaccataaaa tgcgactcca tctccttggc
     4441 aatgattgag tgaatactca atattcaagg tatccggata gctcccttct cttcagcaaa
     4501 atgcagacac tgcaatatag tatctaaccc aagcgtaaat tcgtgataat tatcacgtaa
     4561 atggaatact actgagttat cacattttgc acaaaattct tctttttcaa ccgcttgctg
     4621 taattctgca cggttatgta atatctcttc atgaaccaca ttctttacca taattcagtt
     4681 ccccagctaa tataaatgtt ccatcgtgta gctaaatgct aacgctgcca acaacaatac
     4741 aaatatcact gtacagcagt tatgctttct tagccacatc acaacagata atccaatgat
     4801 gaataaagcc acacgttttt gtgtcgtatc catctgtcat tctttcttgt aaggctgcca
     4861 ttttttggca cctttcagct tatctccgcc gactgcttca aaaatatcgc cggttaaact
     4921 caccaataag gcctcagggc attctgtatt tgcctctcct ttttcagcac accaaccata
     4981 agcctcacct tggtaaatac gaacatatgc cacccctcaa ttagggatga tatgccacgc
     5041 tgatcctgaa tatgtaaaat acaactacgc cggactttgg gaaaaaggca gcgatggcac
     5101 ttttttctac aattaccagc aatttatgcc tgaagttgaa gctaaagaat cactaaggga
     5161 acaagaacct gaacttgatg atggatataa cgaagaggaa tatagcgaag aagaatattc
     5221 cgatgaaaat gatgccagcg atgaaaacga taactacgat gaaacttatg atgataattt
     5281 ttaaatattc ccaaaccaca cttccaaaaa ccctgctctt gacactctat tgctttaagc
     5341 gtaaattatt ccaatatttc gcatttagga gaacataatc cctatgcctg aaagccttgt
     5401 aataagtgaa aggaacataa aatgctattt aaagaaaaag gctacgatga gttccttact
     5461 caaaaaattg caaaaggcag agctgaatta gaatccggaa aaggtattcc tcttgagcaa
     5521 gccacattgt tagttcaatc aactattgaa gaaactgctc aagaactgga cgattaacaa
     5581 tttgtaacat tgctaatata tctatataca actaatgata ggagttatcc atgacagaag
     5641 aataccaaaa cttcttaata gagcaagtaa aacaaggact tgatgatata gaaaacggac
     5701 gtgttatttc attagaagaa agccgtcaac tgtgtcaaaa aaccatatat gaaaccttgc
     5761 aagagctaca gggagccgtg tatgcttagt cgaaaagagg tgttaatgac tcgcagagca
     5821 agtatgaatt tacaacaaat cattcgtaat gttgtggaat atacttatag ctatgaaagt
     5881 ggtgataaat tatctgcgga aattcataac actttggata atctttctta ttttccacga
     5941 attggtgtta taggttcagt agaaaatact agagaatgct tttgccgagg ttatagaatt
     6001 atatatcgag aaacagaaaa tcaagtgcaa attttagcca ttatccattg tcgtcaacaa
     6061 tacccaaccg actattatcg ctctgcattc aaagcataac aggagctata aaatggaaat
     6121 aaaaagaaaa atgaccgtag ccgaattaaa actcaaggca atgctcgcca agcctaccat
     6181 agttcaataa tattaggtgc aaaaaacagg agaaccacaa tgtctctact taaaaaagca
     6241 caaacgttta tctctatttt taatgaagtg cgagctaaaa atgaagctca acgccagtct
     6301 tcaaacaatt taaatgttgc cttgaaaaat gctgctgaaa tgagagctga gatgaatggg
     6361 ttctccctta agcctcaaaa gcgttctact tactttgctg accattatgg ttgtggt
//
LOCUS       DANLZQ010000125         6386 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.125, whole genome shotgun sequence.
ACCESSION   DANLZQ010000125 DANLZQ010000000
VERSION     DANLZQ010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6386)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6386)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6386
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.125"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            29..280
                     /locus_tag="PXE50_002326"
     CDS             29..280
                     /locus_tag="PXE50_002326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5623183.1"
                     /translation="MKIVVFQRKALKQLRKIPTGAEIRRKCDDLAYFPYCANIKALTN
                     HQYDYRFRVGNYRIFFNIEGETMNIVSIEEVKKRDERTY"
     gene            264..611
                     /locus_tag="PXE50_002327"
     CDS             264..611
                     /locus_tag="PXE50_002327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015702293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5623184.1"
                     /translation="MKELTNIQYLNNEEGKPAFAVLPIATLEWLKQKANIKTAIETGI
                     PSAVAGIALDNNYSALRAWREYLGLTQEEVAQRLGISQSAYSQHENAKNLRKTTRIKI
                     AYALGLNEEQLDF"
     gene            complement(652..1812)
                     /gene="trmG/rlmN"
                     /locus_tag="PXE50_002328"
     CDS             complement(652..1812)
                     /gene="trmG/rlmN"
                     /locus_tag="PXE50_002328"
                     /EC_number="2.1.1.-"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA
                     large subunit methyltransferase RlmN"
                     /protein_id="HDL5623185.1"
                     /translation="MSELITNAGCGSAEQPKEKINLLNLNRQEMRELFAEMGEKPFRA
                     DQLMKWIYHFGEENFDNMSNINKVLREKLKRIAEIKAPEVAVEQRSADGTIKWAMQVG
                     DQQIETVYIPEDDRATLCVSSQVGCALACTFCSTAQQGFNRNLSVAEIIGQVWRASKI
                     IGNFGVTGVRPITNVVMMGMGEPLLNMNNVIPAMEIMLDDFAYGLSKRRVTLSTSGVV
                     PALDKMREQIDVALAISLHAPNDELRDELVPINKKYNIKMLMDSVNKYREVSNANHGK
                     VTIEYVMLDHVNDSTNHAHQLAEVLKNTPCKINLIPWNPFPEAPYGKSSNSRVDRFQK
                     TLMEYGFTVTVRKTRGDDIDAACGQLAGDVIDRTKRTLEKRKFGQGIAVKTH"
     gene            2072..2968
                     /locus_tag="PXE50_002329"
     CDS             2072..2968
                     /locus_tag="PXE50_002329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HDL5623186.1"
                     /translation="MKLSTIKKALVLTFGLSAAMAMAEPFKVVTTFTVIQDIAQNVAG
                     DKATVESITKPGAEIHDYQPTPKDIVKAQKADLVLWNGMNLERWFERFFENVKGKPAV
                     VVTEGITPMPITEGEYKNLPNPHAWMSTDNALIYIENIRAALVKYDPQNADTYNANAK
                     AYAEKVKGIAEPLRQRLAFIPEQQRWLVTSEGAFSYLAKDYNLKELYLWAINAEEQGS
                     PKQVKKVIDGVKANKIPVVFSESTVSDKPAKQVAKETGALYGGVIYVDSLSEKDGPVP
                     TYLDLLKVTIGTIVEGFERSKK"
     gene            2981..3724
                     /locus_tag="PXE50_002330"
     CDS             2981..3724
                     /locus_tag="PXE50_002330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HDL5623187.1"
                     /translation="MTTVSASISVENLSVRYNNGHIALQDVSFHLENGTICALIGVNG
                     GGKSTLFKSLMGLVKPLTGSVKLSQLPIAKALKQNLVSYVPQSEEVDWQFPVSVYDVV
                     MMGRYGYMNFLRRPSQTDKLKVEQAMQRLDVLHLKDRQIGELSGGQKKRVFLARALAQ
                     ESKIILLDEPFTGVDVKTENAIVELLKQLKNEGHLILVSTHNLASVPSFCDQVLMVNR
                     TLLAKGKTEEIFNNQNLERVFGGLLHYQK"
     gene            complement(3781..4590)
                     /locus_tag="PXE50_002331"
     CDS             complement(3781..4590)
                     /locus_tag="PXE50_002331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HDL5623188.1"
                     /translation="MLNWILEPLQFEFMQIALITAILVAGVSAVLSCYLVLKGWSLMG
                     DAISHAVLPGVVISSLAGLPLSIGAFFSGLGCALSVGYLKENSRLKEDTVMGIVFSGM
                     FAFGILLFTAFNTGEHLTHILFGNLLGVTKSDLLQTLLISLFTFVVMVAKRKDFLLYC
                     FDVNQAKVAGLPVRLLHYGLLSLLALTIISAMQVVGVILVVAMLITPGITAYLLTKRF
                     DSMLLIALGVAIFSSVFGTLLSYHIDAATGPTIILVQAAIFFLSFAYSKIH"
     gene            complement(4583..5443)
                     /locus_tag="PXE50_002332"
     CDS             complement(4583..5443)
                     /locus_tag="PXE50_002332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HDL5623189.1"
                     /translation="MLDLLLEPFTYNYMQKAIFVSMGVGLVCAFLSAFLMLKGWSLIG
                     DALSHAVVPGVAIAYALKLPYAFGAFFSGILAALSILWVKSLTKIKEDAVIGFIFTTF
                     FALGMFIVSLNPTSVDVNSIVMGNILGIADDDLWQVVLIIAISLLGLILFWKDLLLVF
                     FDEHHALSVGLSPLRYKVIFFTLLSACVVVALQTVGAILVIAMVVTPGATAYLLTDRF
                     PRLVLIAMLIGTLTSGIGAYLSYFLDGATGAVIVCLQTLIFLFAFCFAPKYGLITQKR
                     KLHRVEVQNA"
     gene            complement(5517..6302)
                     /locus_tag="PXE50_002333"
     CDS             complement(5517..6302)
                     /locus_tag="PXE50_002333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-L-fucose synthase"
                     /protein_id="HDL5623190.1"
                     /translation="MMKKITILGLGWLGLPLAEALQNKGWRVAGTKRTVGELAIECYP
                     LDLNALAVTSEIEQLLAADALVIALPLSQIRPENYGCGIQTLVSLAIEKGLKHLVFTS
                     STSVLPMKSGVFDENAVVDSANLLVKMENWLLSQPIHCDILRLAGLVGKKRHPVFYLA
                     GKQNLSGAGQPVNLVHLEDCIAAISLLLEQPNGQRIFHLCAEQHPSRKDYYSEMAKRF
                     GLADLHFSEENQPLVRLIKADKICQELGFRYYYPDPYQFKVDI"
BASE COUNT         2070 a         1375 c         1247 g         1694 t
ORIGIN      
        1 ttataaaact tataaaatag aggcaaaaat gaaaatagtg gtattccagc gtaaagcctt
       61 aaagcaatta cgaaaaatcc caactggtgc agaaattcgc cgaaaatgtg atgatttagc
      121 ttactttccc tactgtgcca atattaaggc attaacaaat catcaatatg attatcgctt
      181 tcgggtcgga aattaccgta tttttttcaa tattgaaggc gaaacgatga atattgtgtc
      241 tatcgaagag gttaaaaaac gagatgaaag aacttactaa tattcaatat ttaaataatg
      301 aagaaggaaa acctgccttt gccgtacttc cgatagcaac acttgaatgg cttaagcaga
      361 aagcaaatat taaaaccgca atagagaccg gtattccatc tgctgttgct ggaattgcat
      421 tagataataa ctactcagct ctgcgtgctt ggcgggaata tttaggttta actcaagaag
      481 aggtggcaca acgcttgggg atttcgcaat cagcttatag ccaacacgaa aatgcaaaaa
      541 atctacgaaa aacgacccgc ataaaaattg cctatgcgtt gggtttaaat gaagagcaat
      601 tagatttcta ataacaaaaa ggcaggaacc tctgcctttt cactattcag attaatgggt
      661 tttaaccgca ataccttgcc cgaatttacg tttttcaagg gtgcgtttgg tgcggtcaat
      721 cacatcgcca gcaagctgtc cgcaagcggc atcaatatca tcacctcgtg ttttacgcac
      781 tgttaccgtg aaaccgtact ccatcaaggt tttttggaaa cgatctaccc gagagttaga
      841 gcttttacca taaggagctt ctgggaacgg gttccacgga atcaagttaa ttttacacgg
      901 cgtgtttttt aatacttcag caagttggtg ggcgtggttt gtgctgtcat tgacatgatc
      961 taacatcaca tattcaatcg tgaccttgcc gtggttggcg ttagaaactt cacggtattt
     1021 attcaccgaa tccatcaaca ttttgatgtt gtacttttta ttaatcggca ctaattcatc
     1081 acgcagttca tcgttcggag cgtgaagtga aattgccaac gccacatcaa tttgctcacg
     1141 cattttgtct aatgccggca ccacacccga agtggaaagc gtgacacgac gtttagataa
     1201 gccgtaagca aaatcatcta acatgatttc cattgccgga atcacgttat tcatattcag
     1261 caatggttca cccattccca tcatgaccac attggtaatc gggcgaacac cggtcacgcc
     1321 aaaattgccg ataattttag aagcacgcca cacttgcccg ataatttccg ccacgcttaa
     1381 gttacggtta aagccttgtt gagcggttga gcagaaggta caagccaagg cacagcctac
     1441 ttgtgaagaa acacacaggg ttgcacggtc atcttcagga atatataccg tctcgatttg
     1501 ctgatcgccc acttgcattg cccatttaat cgtaccgtct gcagaacgtt gttctaccgc
     1561 cacttcaggg gctttaattt cggcaatacg ctttaatttt tcacgcaata ctttattgat
     1621 attgctcata ttatcgaaat tttcttcgcc aaaatggtag atccatttca ttagctggtc
     1681 ggcacggaaa ggtttttccc ccatttctgc aaacagttct cgcatttctt gacgattaag
     1741 atttaataaa ttgatttttt cttttggttg ttcagcagac ccacagcctg cattggtaat
     1801 cagttctgac ataaagttga aagcctcgtt attacacgga ttacggcaaa aggttagggc
     1861 aaatgccctt attttgcgat tggattttaa agcgtgcaat tttactggct cttgagggat
     1921 taggctagta atttttaatc aaaagagttg aattgcctga gtaaacttat caagaataac
     1981 cttataaaaa caagactatt tacatcattc ccaatgttct atagaatagc tttcgataat
     2041 tctcattctc aataacaaaa ggaggctaaa aatgaaacta tcaacaatta aaaaagcatt
     2101 ggtattaacc tttggtttaa gtgcagcgat ggcaatggca gagccgttta aagtagttac
     2161 cacttttacc gtgattcaag atattgcaca aaatgtcgcc ggcgataaag ccactgtgga
     2221 atccattact aaaccgggtg ctgaaattca cgattatcaa ccaacaccaa aagacattgt
     2281 aaaagctcaa aaggcagact tagtgttatg gaacggtatg aaccttgagc gttggtttga
     2341 acgtttcttt gaaaatgtaa aaggtaaacc ggcggttgtc gtcaccgaag gcatcacccc
     2401 aatgccgatt accgaaggtg aatataaaaa tctaccaaat ccgcacgctt ggatgtccac
     2461 cgataacgca ttaatttaca ttgaaaatat tcgtgcggct ttagtaaaat atgacccaca
     2521 aaacgcagac acctataatg ccaatgcaaa agcctatgct gaaaaagtaa aaggtattgc
     2581 tgagccactc cgccaacgtt tagcttttat tcctgagcag caacgttggt tagtaaccag
     2641 tgaaggggca tttagctatt tagcgaaaga ctacaactta aaagaacttt atttatgggc
     2701 aatcaatgcg gaagagcaag gttcgccaaa acaagtgaaa aaagtgattg atggtgtaaa
     2761 agccaacaaa atccctgttg tgtttagcga aagtaccgtt tccgacaaac cggcaaaaca
     2821 agtggcgaaa gaaaccggtg cattatacgg tggcgtaatt tatgtggatt cactttcaga
     2881 gaaagatggt ccggttccaa cctatttaga tttgcttaaa gtgactatcg gcaccattgt
     2941 cgaagggttc gaacgaagca aaaaataata agatttagca atgacaactg tttcagcctc
     3001 catttccgtc gaaaatttat cggtccgtta taataacgga catatcgctt tgcaagatgt
     3061 ctcgtttcat ctggaaaacg gcacaatttg tgcattaatc ggcgtgaatg gaggtggaaa
     3121 atccactctg tttaaaagtt taatggggct ggttaagcca ttaaccggct ctgttaagct
     3181 gagtcagctc ccgattgcta aagccctcaa acaaaatttg gtttcctatg tgccacaaag
     3241 tgaagaagtg gactggcaat ttccagtttc ggtttacgat gtggtaatga tggggcgata
     3301 cggctatatg aattttctac gccgcccaag ccaaaccgat aagctcaaag tagagcaagc
     3361 aatgcaacgc cttgatgttt tacatctcaa agacaggcaa atcggcgaac tttccggcgg
     3421 gcaaaaaaaa cgggtatttt tagcccgtgc cttagctcaa gaaagtaaaa tcatcttact
     3481 tgatgagcct ttcaccggtg tggatgttaa aaccgaaaat gcgattgttg agctacttaa
     3541 acagcttaaa aatgaggggc atttgatttt agtttccacc cacaaccttg ccagcgtacc
     3601 aagcttttgc gatcaggttt tgatggtcaa tcgcacgcta ctggcaaaag gtaaaacgga
     3661 agaaatcttt aataatcaaa atttagaacg ggtgttcggc ggtttattgc attatcaaaa
     3721 gtagtgtttc agcaacaaat cacaaacaaa tagggaggca aatgcctccc tatttttgta
     3781 tcaatgaatc ttagaatatg caaaactgag gaaaaaaatg gccgcttgca cgagaataat
     3841 cgtcggccct gttgcggcat caatatggta gctaagcaac gtgccgaata ccgatgaaaa
     3901 tatcgcaacg cctaaggcaa tcagtaacat actatcaaac cgcttagtca gcaggtaagc
     3961 agtgatcccc ggggtaatca acattgccac cactaaaatc acgcccacca cttgcattgc
     4021 actgataata gttaaagcaa gcaaggaaag taaaccataa tgcaataatc taaccggtaa
     4081 gcctgctact ttggcttgat taacatcaaa gcaatagagc aagaagtctt tgcgtttcgc
     4141 caccatcacc acaaaggtaa agaggcttat gagtaaagtc tgaagcaaat cgcttttggt
     4201 tacgcctaat agattaccaa ataaaatatg ggttaaatgc tcaccggtat taaaggcggt
     4261 aaacagcaag atcccaaagg caaacatacc tgaaaacaca atccccatta ccgtgtcttc
     4321 tttcaagcga ctattttctt ttaaatagcc caccgataag gcacagccta atcctgaaaa
     4381 aaacgcccct attgagagtg gtaacccggc aagtgaggaa atcaccacac cgggcagaac
     4441 agcgtgcgaa attgcatcgc ccattaaaga ccagcctttc agcaccagat agcaagataa
     4501 aaccgcactc acgccagcaa ctaaaattgc ggtaattaac gcaatttgca taaattcaaa
     4561 ttgcaacggc tctaaaatcc aattaagcat tttgaacctc cacacggtgc aatttccgct
     4621 tttgagtaat caagccatat ttaggagcaa agcagaatgc gaataagaaa attaaggttt
     4681 gtaagcacac aattaccgca ccggttgcac cgtctaaaaa gtagcttaaa tatgccccaa
     4741 tccctgatgt cagcgtgccg ataagcattg cgatcagcac taatctaggg aaacggtcgg
     4801 taagtaaata agcagttgct cccggcgtga cgaccatcgc aataaccaaa attgccccaa
     4861 ccgtttgcag agccactact acacaggcac ttaataaggt aaagaaaatc actttatagc
     4921 gtaatggcga aagcccgact gacaatgcgt ggtgttcgtc aaaaaagacg agtagcaaat
     4981 ccttccaaaa taggattaaa cccagtaacg aaatcgcaat aatcagtacc acctgccaca
     5041 agtcatcatc agcaatgcct aaaatatttc ccattacaat cgaattaaca tcaaccgatg
     5101 ttggattgag ggaaacaata aacataccaa gcgcaaaaaa agtcgtgaaa ataaagccga
     5161 taaccgcatc ttctttaatt ttcgtcaggc tttttaccca aagaatcgat aatgccgcca
     5221 aaatcccgga aaaaaacgca ccaaaggcgt agggcaattt tagtgcataa gcgatggcaa
     5281 cacctggcac tacagcgtgt gataaggcat caccaatcaa agaccagcct tttaacatca
     5341 aaaaggcgga aagaaaagca caaactaacc ccacgcccat actgacaaaa atcgcttttt
     5401 gcatatagtt gtaggtaaaa ggctctaata aaagatcaag cataaaatcc taacaagttg
     5461 ttgataatag ttcgcatata ctatcatata aactcctttt cttgtatgga ttaaacttaa
     5521 atatctactt taaattgata aggatcagga tagtaataac gaaaaccaag ctcttggcaa
     5581 attttgtctg cttttatcag ccttacaagc ggttgatttt cttcagaaaa atgcaaatcc
     5641 gctaacccaa aacgttttgc catttcacta taataatctt tacggcttgg gtgctgttcg
     5701 gcacataaat gaaaaatacg ctgcccgttc ggctgctcca acagcaatga aatggctgca
     5761 atacagtcct ctaaatgcac taaattgacc ggctgccctg ctccactcaa gttctgtttt
     5821 cccgccaaat aaaaaaccgg gtgccgtttt ttgcccacca agccagctaa acgcaaaata
     5881 tcacaatgaa ttggctggct cagcaaccaa ttttccattt ttactaatag gttagcagaa
     5941 tcaaccactg cattttcatc aaaaacgccc gatttcattg gcaaaaccga agtcgagctg
     6001 gtgaaaacca gatgtttcaa gcccttttct attgcaagcg aaactaatgt ttgaataccg
     6061 caaccgtaat tttcagggcg aatttggcta aggggcaagg caatcactaa cgcatcagca
     6121 gcaagtaatt gctcgatttc gcttgtcact gctaacgcat ttaaatctag aggataacat
     6181 tctatcgcta attctccgac cgttcgctta gtacctgcaa cacgccagcc cttattttgt
     6241 aatgcttcag ctaaaggtag tccgagccag ccaagcccta aaatggtaat ttttttcatc
     6301 atttacgttt ctcaagatta aaattggaat gaggggaaat tcaggtacaa aaaaagcacc
     6361 tcgtggtgct atctatttta tttcta
//
LOCUS       DANLZQ010000126         6370 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.126, whole genome shotgun sequence.
ACCESSION   DANLZQ010000126 DANLZQ010000000
VERSION     DANLZQ010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6370)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6370)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6370
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.126"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            25..1368
                     /locus_tag="PXE50_002334"
     CDS             25..1368
                     /locus_tag="PXE50_002334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HDL5623191.1"
                     /translation="MIFVADAILFIILLNTLPFTPEANKGLALLIFIAVLWLTEALHV
                     TVTALLIPILAVALGLVKSKEALVAFADPTIFLFFGGFALATALHIQQLDRMIANKIM
                     ALAKGKLSIAVIYLFAVTAFLSMWMSNTATAAMMLPLAMGILSKLDQKQNHNTYLFVL
                     LGIAYSASIGGMGTLVGSPPNAIVASQLNLTFADWLKYGLPIMLILFPLMIATLYIVF
                     KPNFSVSFDRSFEKIELNRSRIITLAIFVFIALGWIFGDKINPIISAFLGINGKIASF
                     DTILALIAAALICITRVANWQQIQENTEWGVLFLFGGGLTLSAVLGQTGASKIMADGV
                     VSLIEGGHFYLIGLIVAAFIIFLTEVTSNTASAALLVPIFISIAQALNMPPVGLALII
                     GLGASCAFMLPVATPPNAIVFGTGQIKQSEMIKVGFWLNIISIFVIATVGYLFWL"
     gene            complement(1425..2567)
                     /locus_tag="PXE50_002335"
     CDS             complement(1425..2567)
                     /locus_tag="PXE50_002335"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HDL5623192.1"
                     /translation="MSQLFPEATIRTQAPYRNDIVGSFLRTDALKKAREDFNQQKITR
                     DELREVTRQEVKKLVELQKQHGVKAVSDGEFSRTWWHLDFLAELDGMDWQETEVFNVN
                     FTGHKPKGQTVKIVGDIDFSESHPFVDAYRLLKEAAGDYPTKFTIPAPTMLHIICCVR
                     AEDYQPLPQYQDEQKLYDDIANAYIKAMHKFYDMGLRNLQLDDTSWGQFCAEDKRKEF
                     AARGFNLTDLAEKYVALLNRIVDAKPADMSITMHICRGNFRSSWFSEGGYGPVAEVLF
                     GKCRVDGFFLEYDTERAGTFEPLRHIKDQQVVLGLITSKFGDLEDKNVIIERIKEAAQ
                     IVPINQLCLSPQCGFASTEEGNILTEAAQWAKLNLIKEIAEEVWGS"
     gene            complement(2781..5348)
                     /gene="clpB"
                     /locus_tag="PXE50_002336"
     CDS             complement(2781..5348)
                     /gene="clpB"
                     /locus_tag="PXE50_002336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HDL5623193.1"
                     /translation="MNFEKMTTKLQEALAESQSLAVGKDNPYIEPAHLLYALLKQEGG
                     SIASLFTTLNVDVPTLIRELQQILDRLPKVQGGNTQVSQQLVRLLNQSDKLAQQFGDS
                     FISSELFVLAALDDNGDLGKLFKQFGLNKEKLTQAISQIRGGDTVNNQNAEDTRQALK
                     KYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA
                     QRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNDLAKEEGQVILFID
                     EIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQKV
                     LVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYVSDRQLPDKAIDLI
                     DEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEEMAAKE
                     REYSELEEIWKAEKSALLGTQHIKSELENARIAMDQARRENDFEKMSELQYGVIPNLE
                     KQLQAVENGEKNADAQLLRTKVTEEEIAEVLSKATGIPVAKMMEGEKEKLLRMEEVLH
                     ARVIGQNEAVDAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELSKTLANFLFDD
                     PDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRHPYSVVLLDEVEKAH
                     PDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIRENAYKGYDVVKEMVM
                     EVVGQHFRPEFINRIDETVMFHSLGQEHIRSIAKIQLQRLIQRLAERGYEVTVTDAAL
                     DHIGKAGFDPLFGARPLKRAIQQELENPLAQQILSGKLLPNKAVTVDYQNGQIVATQ"
     gene            5603..6274
                     /locus_tag="PXE50_002337"
     CDS             5603..6274
                     /locus_tag="PXE50_002337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HDL5623194.1"
                     /translation="MKKSTLAIILGGALLTGTAVAHQAGDVIFRAGAVHVKANSSSDA
                     KSKAATGIDVDLEVKNNTQLGLTATYMLADNVGIELLGATPFSHKINAKAKVLESGAE
                     VDLDRVVILKQLPPSLYAQYYFFELTAKVKPYVGAGLNYTRFYHAKSVSPAVTDLSVK
                     KHSFGPVANLGVDVKLTDNIYFNAAAWYTRIKTTAKFKAAGADHEVKVKLDPVVLFAG
                     FGVKF"
BASE COUNT         1689 a         1323 c         1284 g         2074 t
ORIGIN      
        1 ccgagtaaaa atacacgcaa tagcttgatt tttgttgcag atgctatttt atttattatt
       61 ttgttaaata ccttgccttt tacccctgaa gccaataagg ggttggcatt gttaattttc
      121 attgccgtct tatggctaac agaagcatta cacgttacgg ttacggcatt attaattccg
      181 attttggctg tagcactggg gctggttaaa tcaaaagaag ctcttgttgc ttttgctgat
      241 ccaacgattt tcttattttt tggaggcttt gccttagcga cagcattaca cattcagcag
      301 ctagatcgta tgattgccaa taaaattatg gcattagcta aaggtaaatt atcgattgca
      361 gttatttatt tatttgcggt aacagcgttt ttgtcaatgt ggatgagtaa tacagctaca
      421 gctgcaatga tgttaccttt ggcaatgggg attttaagta aacttgatca gaaacaaaac
      481 cataatactt atcttttcgt gttattagga attgcttata gtgccagtat tggtggaatg
      541 ggtactttag tgggaagccc accgaatgcg attgttgctt ctcaattgaa tctgactttt
      601 gctgattggt taaaatatgg tttgccaatt atgctaattt tattcccatt aatgattgca
      661 acactatata tcgtatttaa accaaatttt tcagttagtt ttgatcgatc atttgagaaa
      721 attgaattaa atcgttctcg tattatcacc ttggctattt tcgtctttat tgcgcttggt
      781 tggatttttg gtgataaaat taaccctatt atttctgcat ttctgggaat taatggcaaa
      841 attgcgagct ttgacaccat tcttgcattg attgccgcag cacttatttg cattactcgt
      901 gtcgcaaatt ggcaacagat tcaagaaaac accgagtggg gggtattatt cctatttggt
      961 ggtggtttga cgttaagtgc tgtattagga caaactggtg cgagcaaaat tatggctgat
     1021 ggggtcgtct cactaattga aggggggcat ttttacctaa ttggtttaat tgtggcagca
     1081 tttattattt tcctaactga ggttacctct aacacagcca gtgcggcttt gttagtgccg
     1141 attttcatct ctatagcaca agcattaaat atgccaccgg tcggattagc cttaattatt
     1201 ggtctaggag catcttgcgc ctttatgttg ccggttgcca ccccaccgaa tgcgattgta
     1261 tttggtacag ggcaaattaa acaaagtgag atgattaaag ttggtttctg gctaaatatt
     1321 atctctatct ttgtgattgc gactgttggg tatctcttct ggttgtaatg ttaaaacaaa
     1381 ctaaaatagc cgagtattta ctcggctatt tgtattatag aggattagct accccaaact
     1441 tcttccgcaa tttctttaat taagtttagt ttcgcccatt gtgcggcttc ggttaaaata
     1501 ttgccttctt cggtggaggc aaagccgcat tgtggtgata agcatagctg attgattggc
     1561 acaatttgag ccgcttcttt aatacgctca atgatcacat ttttatcttc taaatcgcca
     1621 aatttagagg taattaagcc tagtaccact tgttgatctt taatgtggcg tagtggctcg
     1681 aaagtgcctg cacgttcggt atcgtattct aagaagaagc cgtcaacacg gcatttaccg
     1741 aataatactt cggcaaccgg tccataaccg ccttccgaga accaagaaga acggaagtta
     1801 ccacggcaga tgtgcatcgt aattgacata tccgccggtt ttgcatcaac aatacggttt
     1861 aataatgcga catatttttc cgctaaatca gttaaattaa atcctctggc tgcaaactct
     1921 ttccgtttat cttcggcaca gaattgtccc caactggtgt cgtctaattg taagttacgt
     1981 agccccatat cgtagaattt gtgcattgct ttgatataag cattagcaat atcatcgtac
     2041 agtttttgtt cgtcttgata ttgtggtaac ggttggtaat cttccgcacg cacacagcag
     2101 ataatatgta acattgtcgg tgccggaatc gtgaatttgg ttgggtaatc gccggcagct
     2161 tcttttaaaa gacgataagc gtccacaaaa gggtggcttt cggagaaatc aatatcgccc
     2221 acgattttta ccgtttgccc tttgggttta tgaccggtaa agttcacgtt aaagacttcg
     2281 gtttcttgcc aatccattcc atcaagttca gctaagaaat ctaaatgcca ccaagtccgg
     2341 ctaaattcac cgtcagagac tgcttttaca ccgtgttgct tttgcaactc aactaatttt
     2401 ttgacctctt ggcgtgtgac ttcacgcaat tcgtcacggg tgattttttg ctgattgaaa
     2461 tcttctctgg ctttttttaa cgcatcggta cgtagaaagc tgcctacaat atcattacga
     2521 tacggggctt gagtgcggat tgttgcttcc ggaaataatt ggctcataaa ttactccttg
     2581 taattgtatt ggttataaac gccgttaatg atagcaaaaa gagtaataaa aagcccttca
     2641 ttagcttatg aaaattaatg aagggcaata tgaaaatttt tactgtgcaa gcggttattt
     2701 tcgagcaatt ttttgcaaat ttttacgata aatccaccgc ttgtaaggta cgagcgagga
     2761 cgctcgcacc atcggagaca ttattgtgtt gcaacaatct gcccgttttg gtaatccacc
     2821 gtaacggctt tattcggtaa taatttaccg cttaagatct gttgagcaag cggattttca
     2881 agctcttgtt gaatcgcacg tttcagtggt cttgctccga acagcggatc gaaaccagcc
     2941 ttgccgatat gatctaatgc tgcatcggtt actgtcacct catagcctcg ttctgccaag
     3001 cgttggatta agcgttgtag ctgaatcttc gcaatcgaac ggatatgctc ttgaccaagt
     3061 gagtggaaca tcaccgtttc atcaatacgg ttgataaatt cagggcggaa gtgctgtccg
     3121 acgacttcca tcaccatttc tttaaccaca tcatagcctt tatacgcatt ttctcgaatt
     3181 aaatgcgagc ctaagtttga ggtcataatc actaccgtat tgcggaaatc gactgttctg
     3241 ccttgcccgt cggttaaacg cccgtcatct aacacttgca ataaaatgtt aaacacatca
     3301 gggtgagctt tttccacttc atcaagtaac actaccgaat atggatggcg gcgaaccgct
     3361 tcggtcaaat agccgccttc ttcgtagccg acatagcccg gaggtgcgcc cactaagcgg
     3421 gatacgctgt gtttttccat aaattcagac atatcaattc gcaccatagc atcaggatcg
     3481 tcaaacaaga aattagctaa ggttttgctt aactcggttt tacccacgcc ggtcggtcct
     3541 aagaatagga atgaaccaat cggtttattc ggatcggaaa gtccggcacg gctacggcga
     3601 atcgcatttg ccaccgcatc aacggcttca ttttgcccga taacccgagc gtgtaatact
     3661 tcttccatac gaaggagttt ttccttctcg ccttccatca tttttgcaac aggaatgccc
     3721 gttgcttttg aaagcacttc cgcaatttcc tcttcggtga ctttagtacg gaggagctga
     3781 gcatctgcat ttttttcgcc attttcgacc gcttgtaact gtttttccaa gtttggaatc
     3841 acgccatatt gcaattccga catcttctcg aaatcgtttt cacggcgagc ctgatccatc
     3901 gcaattcggg cattttccaa ctccgattta atatgctgtg taccaagtaa ggcggatttt
     3961 tccgctttcc agatttcttc cagctcggaa tattcacgct ctttcgctgc catttcttcg
     4021 tctaatttgg ctaaacgctg acggctcgct tcatcttcct ctttttgtaa cgcttggcgt
     4081 tccaatttga gttggataat gcggcgttct aatttatcca acggctcagg tttagaatca
     4141 atctccatac gcaggcttga agcggcttca tcaatcaagt caatcgcttt atccggcaat
     4201 tgacggtcag acacataacg gtgcgaaagc gttgccgccg ccacgatggc agggtctgta
     4261 atttgaacgt gatgatggat ttcataacgc tctttcaaac cacgtaaaat cgcaatcgta
     4321 tcttcaaccg ttggttcgtc caccaatact ttttggaaac ggcgttcaag ggctgcgtct
     4381 ttttcaatgt attggcgata ttcatcaagg gttgtagccc ccacacagtg caattcacca
     4441 cgggcaaggc ttggttttaa taagttgccg gcgtccattg ctccgtctgt tttgcctgct
     4501 ccaaccatcg tgtgaatttc atcaataaag aggataactt gcccttcttc tttcgccagg
     4561 tcgtttaaaa ccgcttttaa acgctcttca aattcaccac gatatttcgc accggcaatt
     4621 aatgctccca tatccagcga aagtacacgc ttatttttca agccttccgg cacttcgccg
     4681 tttacaatac gctgtgccaa gccttctaca atcgccgttt tccccacacc cggttcacca
     4741 attaacacag ggttgttttt ggtacggcgt tgtaagactt gcaccgcacg gcgaatttct
     4801 tcatcacgcc cgataaccgg gtctaattta ccggctttgg ctctttcggt taaatcaatc
     4861 gtatattttt tgagtgcttg gcgggtatct tccgcatttt gattattcac tgtgtctcct
     4921 cctcgaattt ggctgatggc ttgtgttagt ttttccttgt ttaagccaaa ttgtttaaat
     4981 agtttcccca aatcgccatt gtcatcaagt gcagctagaa caaatagttc tgatgaaata
     5041 aagctgtcgc cgaattgttg tgccagtttg tctgattgat ttaacagtct gaccaactgt
     5101 tgtgaaactt gggtgttacc gccttgaact ttcggcaagc ggtctaaaat ttgttgtaat
     5161 tcacgaatta aagtcggtac atcaacattt aatgtggtaa acaaagaagc aatcgagcca
     5221 ccttcttgtt ttaacaacgc atagagcaaa tgtgccggtt cgatgtacgg attatctttt
     5281 cctaccgcaa gcgactgtga ttcagccaag gcttcttgca gttttgtggt cattttttca
     5341 aaattcattt ctttctcctt acaatgagtt tagaaagtgt aaatttttat ttacatctct
     5401 tgttgaaaca ctaaatggag cttggtaaac aattttcaag taaaaatgtg aaaaagatca
     5461 caaaaataaa taaaataact cttgttgggt atctttgtgt taaaagtttg ataaatatca
     5521 attcatttct atttcatttc atttacactt cgctaaagtt tacctcatta taggtattct
     5581 aattattttt gaggatatga aaatgaaaaa atcaacttta gcaattattt taggtggggc
     5641 attattaact ggaactgcgg tggcacatca agcaggtgat gtgatattcc gtgccggtgc
     5701 ggtacatgtt aaggcaaatt caagttcaga tgcaaaatca aaagcagcga caggtattga
     5761 tgtagattta gaagtgaaaa acaatactca gttaggctta actgcaactt atatgttagc
     5821 cgataatgtg ggtattgagt tattaggtgc aacccctttc tctcataaaa ttaatgccaa
     5881 agccaaagtt ttagaatcag gtgcagaagt agatttggat agagttgtta tcttaaaaca
     5941 attaccaccg agcctttatg cccaatacta tttctttgag ctaactgcaa aagtaaaacc
     6001 ttacgttggt gcaggtttaa attacactcg cttctaccac gctaaatcag ttagccctgc
     6061 tgttactgac ttaagtgtaa aaaaacattc tttcggaccg gtagcaaacc taggtgttga
     6121 tgtaaaatta accgataaca tctacttcaa cgcggcagct tggtacacac gcattaaaac
     6181 aaccgcaaaa tttaaagcag caggtgcaga tcacgaagta aaagtaaaac ttgatccggt
     6241 tgtcttattt gccggtttcg gggtgaagtt ctaattattt gttgggaacg agttgggcta
     6301 atcttagtga ttagtccttt tttgttaaag ttgtttgaat atagcccttt ccacttttaa
     6361 ttaaataatt
//
LOCUS       DANLZQ010000127         6368 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.127, whole genome shotgun sequence.
ACCESSION   DANLZQ010000127 DANLZQ010000000
VERSION     DANLZQ010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6368)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6368)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6368
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.127"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..422
                     /locus_tag="PXE50_002338"
     CDS             <1..422
                     /locus_tag="PXE50_002338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623195.1"
                     /translation="HNNSQISYQETEEVNLDARLRQVEGDVREIKSNYLTKEAFYKAG
                     GSTLIALVVTAVIALWTVYSHLDTKVEARFSKIDDKFVQVETNIKNLDIRLTKVESRL
                     DNVEQRLDNVEQRLGNMDKKIDGIDNKLDLLLQQFKR"
     gene            1004..1273
                     /locus_tag="PXE50_002339"
     CDS             1004..1273
                     /locus_tag="PXE50_002339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623196.1"
                     /translation="MKNKNFEIAKVVILNEQLGSPKDLELKVVENSLSDEDRYDIKQA
                     VLKAVGNGCSDPEMLASRCCSAIEIINRNGLNTGNGSISTSSNSV"
     gene            complement(1251..1523)
                     /locus_tag="PXE50_002340"
     CDS             complement(1251..1523)
                     /locus_tag="PXE50_002340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014391457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated protein Cas2"
                     /protein_id="HDL5623197.1"
                     /translation="MRNYLISYDLYKAGQNYDGLISYIKSHQVWAAIHKSVWYIKSNK
                     SAEQIRNELLIYLDKNDSVFVTDMNSAAWNNLTEGNGEYIRQNWMR"
     gene            1804..1879
                     /locus_tag="PXE50_002341"
     tRNA            1804..1879
                     /locus_tag="PXE50_002341"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1837..1839,aa:Arg,seq:tct)
     gene            2191..2703
                     /locus_tag="PXE50_002342"
     CDS             2191..2703
                     /locus_tag="PXE50_002342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623198.1"
                     /translation="MEAKYNMIIELAQQQGLTHIQLTQKHCLHLAASVGKLCSGVVNN
                     AKQKIKTATGEIFTLLTIINHQIQFDEDLELHTWKASGTTPPEQRAIRMLHHTSQFAW
                     FAPWLVNNNEKECNQNKIRIDVYNKCSGMMIELEGILTEYKLTLDECVDEFLGNDHCL
                     SEFITKGTKK"
     gene            2700..3059
                     /locus_tag="PXE50_002343"
     CDS             2700..3059
                     /locus_tag="PXE50_002343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623199.1"
                     /translation="MKTFSIHTSVWHDSSTKGFRHNIKHKRHDCWRADIRIKQKINNV
                     WVQISRIRKRFKCPEQAKSFAEQWKQTETPAFLQHQINRQALREELSNLEQRKIQKNG
                     MLEVIEYRISQIKELLK"
     gene            3056..3535
                     /locus_tag="PXE50_002344"
     CDS             3056..3535
                     /locus_tag="PXE50_002344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623200.1"
                     /translation="MKRNKVESYTIRLLKNNHTKRYFGEVILNGIKEISTAEMMSEIN
                     AIKALNKRIEALNKTKAVNLPNYPEIRGHQPIMYNYTFEQIEEDPEQVKPKPSKPKRK
                     PFTPYGLNGYFVDSNGNIRLHLDRRASAETITLETDFFNALAEMVKRTQEANNAKHA"
     gene            3669..3881
                     /locus_tag="PXE50_002345"
     CDS             3669..3881
                     /locus_tag="PXE50_002345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623201.1"
                     /translation="MIGYEDYTDASLQPEEDPSEEAFLLVEEKIIDVLENNGFETVAT
                     ILAGSDGWCNAINAYLAEQNKHRNEF"
     gene            3894..4817
                     /locus_tag="PXE50_002346"
     CDS             3894..4817
                     /locus_tag="PXE50_002346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecT"
                     /protein_id="HDL5623202.1"
                     /translation="MTNQNQQVAQKQDKFPIKTLFESPNVKQKLQELLNKNAATFTTS
                     VLQIVNSNSMLRNAEPMSVFNAACMAATLNLALQNGLGFAYIVPYQNRKEKKTEAQFQ
                     LGYKGLIQLAQRSGQFKRLVAVPVYEKQLLAEDPINGYEFDWKQKPAKDEKPIGYYAY
                     FKLINEFTAEIYMTTQEVHDHANRYSQTYRKGYGVWHDNFEAMALKTVMKLLLSKQAP
                     LSVEMQQAVLADQAVVKDVENAEFAYPDNEIQEAEFTELKVSDEVFEKCKQTIINKES
                     TLQDMCDNGYEFNKEQYAELEKLENEQQSNV"
     gene            4810..5472
                     /locus_tag="PXE50_002347"
     CDS             4810..5472
                     /locus_tag="PXE50_002347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017806850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translocation protein TolB precursor"
                     /protein_id="HDL5623203.1"
                     /translation="MYKFKPRCSMLHQLMSEPRTKADREAGLISDTAKAAVREVAKFD
                     LFGYQSFDGNKYTEKGNQLEEQAIKLSGFTRGLVLKKNTERRENDWISGECDIYVPSR
                     KLIIDTKCSWDIGTHPFFADEAIAKAEKAGYDIQMQGYMWLWDCEEAQIDFVLFPTPI
                     DLIGTYESTEKLIDLVEQIPQQKRITTVTVKRDEAIIAKIKDRVKAASKYYDKLIQEA
                     MN"
     gene            5513..6358
                     /locus_tag="PXE50_002348"
     CDS             5513..6358
                     /locus_tag="PXE50_002348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623204.1"
                     /translation="MTTQKKYELLQNDTINHNGRTLYRIKAITTFGTVFAGTLGGYIE
                     KESNLKHLGNAWVYDNAKVYDSAEVYGNAKVYDSAEVYDNAKVYDSAEVYGNAKVYDS
                     AEVYGNAKVYDSAEVYGNAEVYGNAEVWGSAKVWGNAEVWGSAEVYGNAKVYGNAEVW
                     GSAKVWGNAEVWGSAEVWGSAEVYGNAKVYDSAEVWGSAKVRSFAVLSERKMIFWASN
                     VGTENGTLTVYNGKDGLLVTRGCFTGTVEEFLAKSDEVHDEKTKREYQLLIEVAKSRI
                     LGEAT"
BASE COUNT         2214 a         1291 c         1334 g         1529 t
ORIGIN      
        1 ggcataataa ttcacaaatt agttatcagg agactgaaga agtgaattta gatgctcgat
       61 taagacaagt tgaaggcgat gtaagagaaa tcaagtcaaa ttatttgacg aaagaggctt
      121 tttataaagc tggtggctct acactcattg cattagtagt tactgctgta attgcattat
      181 ggacagtata ttcacacctt gacaccaaag ttgaagctcg attctcgaaa attgatgata
      241 agtttgtcca agtagagacc aatatcaaaa atcttgatat tcgcctcact aaagttgaat
      301 ctagattaga taatgtcgaa caacgactag acaatgttga gcagcgacta ggcaatatgg
      361 ataagaaaat agatgggatt gataataaac tcgatctgtt actacaacaa ttcaaaagat
      421 aaaataatat tccttgaata aaccgccagg agggcggttt tctcttgcct aaaatctgca
      481 aaattctctt caaaaacgac cgcttgcaac tcaatctgtt tatttattaa gcaatcaaac
      541 aacctttcta aaaataaatt ccttttaaaa tcaacaaatt acctttttgt tatttatttt
      601 taccttattt aacatacctt ttggtattta caacaatatt taccataagg tataatgcac
      661 ccatcaaaac gagctacggc tcaatgctct ttaaaaatca aattcaaaac cgctttaagc
      721 ctaatggtga aaagtaggaa gacgaaagtc ggaggcagcc cttaaaacgc ccactacttc
      781 aaagcgttat gccctttggt gcaagcaaag gaatacaagc atataccctt atagcggttt
      841 aggtgaaagt ctgggcgtgt acattgagac acaagggagt aaccgaaatt caaattgtgc
      901 aaacgcagct ctaaaattgc gtgacagctc ggagagacgg catttcaaat tccaaagcat
      961 atttgagaaa gtgtgttttg gaatatttaa ctagaggtaa attatgaaaa acaaaaattt
     1021 tgaaattgcg aaagttgtta ttttaaatga acaactagga agccctaaag atttggaatt
     1081 aaaagtagta gagaatagcc tatctgatga agatagatac gacatcaaac aggcggtact
     1141 taaggctgta gggaatggtt gttcagatcc agaaatgctt gcatcacgat gttgttccgc
     1201 aatcgaaata attaatagaa atgggctaaa cactggtaat gggagtatat ctacctcatc
     1261 caattctgtc taatgtattc accatttcct tcagtcagat tattccaagc agcactattc
     1321 atatccgtaa caaagacact atcgttctta tctaaataaa tgagcagttc attacgaatt
     1381 tgttctgcag atttattaga tttgatatac caaactgatt tatgaatagc agcccaaact
     1441 tgatggcttt taatataact aatcaatcca tcgtaatttt gcccagcttt gtataaatcg
     1501 taagaaatta aatagtttct catagaagaa tccttatttg tgctgtgaga gatttaatta
     1561 tattccttag tgttgtgaga gacaataagg aaacttgacg gctcacaagt ataaaagagc
     1621 caccatctca aaccgctctc aacaaagagt tagcccgata acctcacttg gttttttgcg
     1681 tatgttttcc caaagtgccg ttatccagcg aaacgaatgg actagagagc ggtttgagat
     1741 ggtgaaagcc atcctcctta gattgaagta aaccctgccg ttggggttaa gcaacggtac
     1801 tttgaccgca tagttcagtg gatagagcag ctgccttcta agcagtgggt cgagagttcg
     1861 aatctctctg cggtcgccat ccaaaaccgc tttgcgcaca tcatcgatga cgagcctacg
     1921 aagtggaaac ctaccgtgta gagcggtttt gaatggctaa taaaacaatg tgaggtatca
     1981 aatgcttatt aagttaaaaa gccctgaaca agcagggcaa gaagaaatct gggaagttag
     2041 cgatgattgg attgctcctc aagaattaaa tccgccatca gaaacatctc cttaatataa
     2101 cgcctgtaga gttgctcaag gttaagtaat tactgcggag gggcttttta cacccaaaat
     2161 tcagattttt gactaaaaaa ggaacgaaaa atggaagcta aatacaacat gattattgag
     2221 ctggcacaac aacaaggctt aacccatatt caacttactc aaaaacactg tcttcatctt
     2281 gctgcatcag tggggaaact atgttctgga gtcgttaata atgcgaaaca gaagattaaa
     2341 acggctacgg gagaaatttt tacattactc accatcatta accatcaaat ccagttcgat
     2401 gaagacttag agcttcacac gtggaaagct agtggaacaa ccccacccga gcaaagagcg
     2461 atacgtatgt tacatcatac ctcgcaattt gcttggtttg ctccttggtt agtgaataac
     2521 aatgaaaaag aatgtaacca aaataaaata agaattgatg tatacaacaa atgttccgga
     2581 atgatgattg agctggaggg tattcttaca gaatacaagc taactcttga tgagtgcgta
     2641 gacgaattct taggaaatga ccattgtttg agtgaattta ttaccaaagg aacgaaaaaa
     2701 tgaaaacttt tagcattcac actagtgtat ggcacgacag ctcaactaaa gggtttcgac
     2761 acaacatcaa acataaacgc cacgactgct ggagagcgga tatccgcata aaacaaaaaa
     2821 tcaataatgt gtgggtgcaa atctcaagaa tacgcaagcg tttcaaatgc cctgaacaag
     2881 caaaatcctt tgctgaacaa tggaaacaaa ctgaaacacc tgcatttttg caacaccaaa
     2941 tcaaccgcca agcattaaga gaagaattat caaaccttga gcaacgtaaa atccaaaaaa
     3001 acggaatgct tgaggtgatt gagtatcgta ttagccaaat caaggagtta ctgaaatgaa
     3061 acgcaataaa gtagaaagct atactatccg cttattaaaa aataatcata caaaacgcta
     3121 cttcggagaa gttatattaa acggcataaa agaaatcagc acggcagaga tgatgtctga
     3181 aattaacgct attaaggcat taaataagcg tattgaagct ctgaataaaa ccaaagccgt
     3241 taatttgcct aattatcctg aaatcagggg tcatcagcct attatgtaca attacacttt
     3301 tgaacaaatt gaggaagatc ctgaacaggt taagcctaaa ccatcaaaac caaaacgcaa
     3361 acctttcaca ccctacgggc taaacggcta ctttgtggat agcaacggca atattcgcct
     3421 gcacctagac agacgagcaa gtgccgaaac aattaccctt gaaactgatt tcttcaacgc
     3481 tcttgccgaa atggtaaaac gtacacaaga ggcaaacaat gctaaacatg cttagacaat
     3541 ggattacata cggcttatac gccctgcttt ttatggttgc catcaccctc ctaatgcaat
     3601 gaagagctta tccctgaaag cacctgcaag cctgaaactt gcgaatttaa agtaacggag
     3661 aaagtgtgat gataggatac gaagactaca cagatgcttc acttcaacca gaagaagacc
     3721 ctagcgaaga ggctttcctc ttagtggagg agaaaattat agatgtgcta gaaaacaacg
     3781 gctttgaaac cgttgctact atcctagccg gttctgatgg ctggtgtaac gcaattaatg
     3841 cctacctggc cgaacagaac aaacacagaa atgaatttta gaggaataag ataatgacaa
     3901 accaaaatca acaagtagca caaaagcaag ataaattccc gattaaaacc ctatttgaaa
     3961 gcccgaatgt aaagcaaaaa ctacaagagc ttttaaacaa aaacgcagcc acgtttacaa
     4021 caagcgtgtt gcagattgtg aatagtaact caatgttacg caatgccgaa ccgatgagcg
     4081 tattcaacgc cgcttgtatg gcagcaacgc ttaatttggc attacaaaac ggcttaggtt
     4141 ttgcctacat tgtgccgtac caaaaccgca aagagaaaaa aaccgaagct caattccaac
     4201 ttggctacaa aggtttaatt caactggctc aacgtagcgg gcaatttaaa cgccttgttg
     4261 ccgtgccggt gtatgaaaaa caactgcttg ccgaagaccc catcaacggt tacgagttcg
     4321 attggaaaca aaaaccggct aaagatgaaa aaccgattgg ctattacgct tatttcaaac
     4381 tgataaatga atttaccgcc gaaatctata tgaccacgca agaagtccac gaccacgcca
     4441 accgctacag ccaaacctac cgcaaaggct acggcgtatg gcacgacaac tttgaggcaa
     4501 tggctctcaa aactgtgatg aagctcttgc tttccaaaca agctccatta tcagtggaaa
     4561 tgcaacaagc ggtcttggca gatcaagcgg tcgtaaaaga tgttgaaaat gcagaatttg
     4621 cctaccctga caacgaaatc caagaggcgg aatttaccga actcaaggtc agcgatgagg
     4681 tgtttgagaa atgcaaacaa accatcatca acaaagaaag caccttgcaa gatatgtgcg
     4741 ataacggcta cgagttcaac aaagagcaat atgcggagtt ggagaagtta gaaaatgaac
     4801 agcaatcaaa tgtataaatt caaaccccgt tgctcaatgc tccaccaact aatgagcgaa
     4861 cctcgcacca aagccgaccg tgaagccgga ctgatttccg acaccgcaaa agcagcggtg
     4921 cgtgaagtgg ctaaatttga cctattcggt tatcaatcct ttgacggcaa caaatacact
     4981 gaaaaaggca atcagctaga agaacaagcc attaagttaa gcggttttac tcgtggcctg
     5041 gttctaaaaa agaacaccga acgccgagaa aacgattgga tttcaggcga gtgtgatatt
     5101 tatgtaccaa gccgaaagct gattatcgat acaaaatgca gttgggacat cggcacgcac
     5161 ccgttttttg cagacgaagc catcgccaaa gccgaaaaag ccggatatga cattcaaatg
     5221 caaggctata tgtggctgtg ggattgcgaa gaggctcaaa tcgattttgt gttattccct
     5281 actccaatcg accttatcgg tacttacgaa agcacagaaa agctgattga ccttgtggaa
     5341 caaatccccc aacaaaaacg cattaccacc gtgacggtta agcgtgatga agccatcatt
     5401 gccaaaatca aagacagagt gaaagcagcc agtaagtatt acgacaagct tatacaagaa
     5461 gctatgaatt aattcaatcg ccccgaaagg ggctttttaa taggtgacaa atatgacaac
     5521 ccaaaagaaa tacgaactcc tccaaaacga cacaatcaac cacaacggca gaacactcta
     5581 ccgcatcaaa gccataacca catttggaac agtctttgca ggtacacttg gcggctatat
     5641 tgaaaaagag agcaacctaa aacatttagg aaatgcttgg gtgtatgaca acgccaaagt
     5701 gtatgacagc gccgaagtgt atggcaacgc caaagtgtat gacagcgccg aagtgtatga
     5761 caacgccaaa gtgtatgaca gcgccgaagt gtatggcaac gccaaagtgt atgacagcgc
     5821 cgaagtgtat ggcaacgcca aagtgtatga cagcgccgaa gtgtatggca acgccgaagt
     5881 gtatggcaac gccgaagtgt ggggcagcgc caaagtgtgg ggcaacgccg aagtgtgggg
     5941 cagcgccgaa gtgtatggca acgccaaagt gtatggcaac gccgaagtgt ggggcagcgc
     6001 caaagtgtgg ggcaacgccg aagtgtgggg cagcgccgaa gtgtggggca gcgccgaagt
     6061 gtatggcaac gccaaagtgt atgacagcgc cgaagtgtgg ggcagcgcca aagtaagatc
     6121 atttgcagtt ctttctgaaa gaaaaatgat tttctgggcg agcaatgtcg gcacagagaa
     6181 cggtacatta accgtttaca acggaaaaga cggactgctt gtaacaagag gctgtttcac
     6241 cggcacagtc gaagagtttt tagcaaaatc cgacgaagtt cacgatgaga aaacgaagcg
     6301 ggaatatcag ctactgattg aggtagcaaa aagcagaatt ttaggagaag cgacttaatc
     6361 agtcgctt
//
LOCUS       DANLZQ010000128         6364 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.128, whole genome shotgun sequence.
ACCESSION   DANLZQ010000128 DANLZQ010000000
VERSION     DANLZQ010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6364)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6364)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6364
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.128"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            114..1340
                     /locus_tag="PXE50_002349"
     CDS             114..1340
                     /locus_tag="PXE50_002349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAAAP family serine/threonine permease"
                     /protein_id="HDL5623205.1"
                     /translation="MAMPSQRFSLTWVLNLFGTAVGAGVLFLPINAGMGGFYPLIIMT
                     LLVGPMTYLAHRGLTRFVLSSKYKGSDITAVVREHFGEQAGKLITLLYFFAIFPILLI
                     YGVGITNTVSSFMENQLHIAPPSRAVLSFMLIAAMIGVMLLSEQVMLKITTCLVYPLV
                     LILLGLSIYLIPQWNTAALQQMPTTGDFLTTLWLTIPVLVFAFNHSPAISSFALSQQK
                     YYQDDKKAEIESAKVLRSTAFILVLFVMFFVFSCVLTLTPEELAQAKVQNISILSYLA
                     NKFDNPIISYFGPLVAFLAIGSSFFGHYLGAREGLEGLVNQMRKEPIDPSKFRKITAI
                     TFLIILWIVATINPSILGFIESLGGPIIAMILFIMPVYAVYKVPALARFKGEFGHLFV
                     LVMGCIAISAIVYGLL"
     gene            1397..2773
                     /locus_tag="PXE50_002350"
     CDS             1397..2773
                     /locus_tag="PXE50_002350"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000626422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HDL5623206.1"
                     /translation="MISVFDMFKVGIGPSSSHTAGPMKAAKEFVDELQNRKFLNKIDR
                     LRVDVYGSLSLTGRGHNTDIAIIMGLMGYLPHNVDIERIEQTIENLKQNKQLIIAESS
                     VEPKVIAFDFYEDMPFHRDFLPRHENGVKFSALSGEELLFQNTYYSIGGGFIVDEANF
                     EQVKNSDLSVPFPYQNAADLLAHCKNNGLPLSSLVWKNELALRSRVEISDYLAMIWNT
                     MEACIERGLNTEGLLPGPLKVVRRASGLRRMLEANSKFNTDPMQIIDWVNMFALAVNE
                     ENAAGGRVVTAPTNGACGIVPAVLAYYQKFIAQLNQDTIERYLLTTSVIGSLYKMNAS
                     ISGAEVGCQGEVGVACSMAAAGLTEIMGGSAEQVCMAAEIAMEHNLGLTCDPVGGQVQ
                     VPCIERNAIASVKAINASRMALRRTSSPQVSLDKVIETMYETGKDMNAKYRETSTGGL
                     AIKILPCD"
     gene            complement(2828..4417)
                     /gene="purH"
                     /locus_tag="PXE50_002351"
     CDS             complement(2828..4417)
                     /gene="purH"
                     /locus_tag="PXE50_002351"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005821463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HDL5623207.1"
                     /translation="MAIQQALLSVSDKKGIVEFARGLSARGVKLLSTGGTAKLLAEAG
                     LLVTEVSDYTGFPEMMDGRVKTLHPKVHGGILGRRGTDDEVMNQHGIERIDMVVVNLY
                     PFAQTVANPNCSLEDAVENIDIGGPTMVRSAAKNHKDVAIVVNNNDFDAILAEMDQHQ
                     NSLTLETRFNLAIKAFEHTAQYDSMIANYFGQKVPPYQGAEEEDLTQPSGQFPRTLNL
                     NFVRKQTMRYGENSHQNAAFYVENELKEASVSTAKQLQGKALSYNNIADTDAALECVK
                     EFSEPACVIVKHANPCGVALGKNILDAYNRAYQTDPTSAFGGIIAFNRELDGETAQTI
                     ADRQFVEVIIAPTVSASAKEVLATKKNVRVLECGEFSEAVKRLDFKRVNGGLLVQDAD
                     QGSVSIDDLKVVSERKPTEAELKDLLFCWKVAKYVKSNAIVYAKDGQTIGIGAGQMSR
                     VYSAKIAGIKAEDEGLQVVGCVMASDAFFPFRDGIDAAAKVGITCVIHPGGSMRDQEV
                     IDAANEHGMAVVLTGMRHFRH"
     gene            4589..4858
                     /locus_tag="PXE50_002352"
     CDS             4589..4858
                     /locus_tag="PXE50_002352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDL5623208.1"
                     /translation="MINHNLADFVFEYFTENNLKAGTLRYRYIKENVIDAYSTRVDDA
                     FQGKGIAGELYNALIAFAQEKGLKIKPSCSYIEVKMQRSHRDLIA"
     gene            complement(4945..6348)
                     /gene="dacB"
                     /locus_tag="PXE50_002353"
     CDS             complement(4945..6348)
                     /gene="dacB"
                     /locus_tag="PXE50_002353"
                     /EC_number="3.4.16.4"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine-type D-Ala-D-Ala carboxypeptidase"
                     /protein_id="HDL5623209.1"
                     /translation="MLSTLLIPSITQAEINTEELLNTLPAGTSVSFIAKNLDTNQIIT
                     QYQSDIFMLPASTQKVFTALAAKLTLNDDFRFQTALLTNGKVENGVLKGNLIARFSGD
                     PELTSGQIYQLMSKLKQQGINKIEGDLILDPSVFASHDKASGWIWNDLTMCFNAPPAA
                     INVDHNCFYVTLNADQPIGEFAKVNVPSAYPVQVFSSAYIVEPKEAPFCQLDVVVHDN
                     NRYQIKGCMARQSQPFGLSFSVQDPTNYGANMLKAQLKSLKIAFNGQVKEPLTAQNGT
                     LLAEHYSEPLPVLLKKMMKKSDNQIADALFRTVANKQHNRPASFQLGSYVIRQLLKTK
                     ANIDFKNSVVADGSGLSRHNQVSSRTMLETLEYIAQNEESLKLFETFPIAGVDGTISG
                     RGSISTEPLAKNLIAKTGSLKGVYNLAGFMKNARGERIAFVQFINGYSTGELESKTKR
                     APLNTFENKFYMALFNE"
BASE COUNT         1766 a         1247 c         1359 g         1992 t
ORIGIN      
        1 attttttctg cttttaatag tttgatcaaa aaatacgtaa aatcttgttg tgttactgtt
       61 tcccatcgct aatatagcat agcttgttag ataattcttt aaaggagatt actatggcta
      121 tgccatctca acgtttttct cttacttggg tactaaattt atttggtact gcggtaggag
      181 ccggcgtttt atttttgcca attaatgcag gtatgggtgg gttctaccca cttattatta
      241 tgactttgtt agttggacca atgacatatt tagctcaccg tggcttaaca cgttttgtgc
      301 tttcttcaaa atacaaaggg agcgatatta cggctgttgt tcgtgaacat tttggtgaac
      361 aggccggtaa attgatcacg ctactgtact tctttgccat ttttccgatt ttactgattt
      421 atggtgtagg tattaccaat accgtgagtt cttttatgga gaatcagctt catatcgcgc
      481 caccatctag ggctgtatta tcgtttatgc taatagctgc tatgatcgga gtaatgttat
      541 taagtgagca agtcatgtta aaaatcacaa cttgtcttgt gtatccatta gtgttgattt
      601 tattgggctt atctatttat ttaattccac agtggaatac agctgcctta cagcaaatgc
      661 caactacagg agacttcctt actacacttt ggctgactat tcctgtttta gtctttgctt
      721 ttaaccattc accggctatt tcttcttttg cactttctca acagaaatat taccaagatg
      781 acaagaaggc tgaaattgaa tcagctaaag tattacgttc taccgccttt atcttggtgt
      841 tatttgtgat gttctttgta tttagctgtg tattaacttt gacacctgaa gaattagcac
      901 aagctaaagt gcaaaatatt tcgattcttt cttaccttgc gaataaattt gataatccga
      961 ttatttccta ttttggaccg ttggttgctt ttttggcgat tggtagctct ttctttgggc
     1021 attatttagg tgcgcgcgag gggttagaag gattggttaa tcaaatgcgt aaagagccga
     1081 ttgatccaag caaattccgc aaaattaccg ctattacttt tttgatcatt ttatggattg
     1141 ttgcgactat caatccaagc attttaggct tcattgaaag ccttggtggg ccgattattg
     1201 cgatgatctt gtttattatg cctgtctatg ccgtatataa agtaccggca cttgcacgtt
     1261 ttaaaggtga atttggccat ttatttgtgc ttgttatggg ttgtattgct atttcagcaa
     1321 tagtatatgg gttactgtaa tctttctaaa atcaatgtag aatacgccct tttattttct
     1381 atgtgaattt gtgtttatga ttagtgtatt tgatatgttt aaagtaggga ttgggccttc
     1441 cagttcccat actgcggggc cgatgaaagc ggcaaaggaa tttgtcgatg aattacaaaa
     1501 tcgcaaattt ttaaacaaaa ttgaccgctt gcgggtagat gtctatggtt cattatcact
     1561 caccgggcga ggacataata cggatattgc catcataatg ggattaatgg ggtatttgcc
     1621 tcataatgtg gatattgaac gtattgagca gacgattgaa aatctaaaac aaaataagca
     1681 acttatcatt gctgaaagca gtgttgagcc taaagtgatt gcgttcgatt tttatgagga
     1741 tatgccattt catcgagatt tcttacctcg gcacgaaaat ggtgtgaaat ttagtgcctt
     1801 gagcggtgaa gagttgctat ttcaaaacac ctattattct attggtggtg gctttattgt
     1861 tgatgaagct aactttgagc aagttaaaaa ttcagatctt tctgttccat tcccatatca
     1921 gaatgcagca gatttacttg cacattgtaa gaataacggg ttaccgcttt cttctttagt
     1981 ctggaaaaat gagcttgctt tacgcagtag agtagaaatt tcggattatt tggcaatgat
     2041 ttggaataca atggaagcct gtattgagcg tggtttgaat acggaagggt tactacccgg
     2101 gcctctgaaa gtggtacgcc gtgccagtgg gctacgcaga atgttagagg caaacagtaa
     2161 attcaatacc gacccaatgc aaattatcga ttgggtgaat atgtttgccc ttgccgtgaa
     2221 tgaagaaaat gcggcaggtg ggcgagtagt caccgcacct accaatggag cctgtggtat
     2281 tgttccggct gtgttggcgt actaccaaaa atttattgca cagcttaatc aagatactat
     2341 tgagcgttat ttattgacta ccagtgtgat tggttcgtta tacaaaatga atgcctctat
     2401 ttccggtgct gaagtaggtt gccaagggga agttggtgtt gcttgttcaa tggcggcagc
     2461 aggtttaacg gaaattatgg gtggcagtgc tgaacaggtg tgtatggctg cagaaattgc
     2521 aatggagcac aatttaggcc taacttgtga ccctgttggc ggacaagtgc aagtgccttg
     2581 tattgaaaga aatgcaatcg cttcagtcaa agcgattaat gccagcagaa tggcactacg
     2641 ccgtacttct tcgcctcagg taagtttaga taaagtcatt gaaacaatgt acgaaaccgg
     2701 caaagatatg aatgcaaaat accgtgaaac ctcaaccggt ggcttagcaa tcaaaatttt
     2761 accttgtgat taattaatga aaaaggctac cttatcaaaa taaggtagcc ttttagtttg
     2821 tagaacatta atgacggaaa tgcctcattc cggttagtac cactgccata ccgtgttcgt
     2881 tggcggcatc aatcacttct tgatcacgca ttgaaccacc tgggtgaatc acacaagtaa
     2941 tccctacttt tgcagcagcg tcaataccat cacggaacgg gaagaacgca tcggaagcca
     3001 ttacacaacc cacaacttgt aagccctcgt cttccgcttt aatacctgca atttttgcgg
     3061 aataaacacg gctcatctgc cctgcaccga taccgatagt ttgcccgtct ttggcataca
     3121 caatcgcatt cgatttcaca tatttcgcca ctttccagca gaacaatagg tcttttagct
     3181 cagcttcagt tggtttacgc tctgaaacca cctttaaatc gtcaatagat acagagcctt
     3241 ggtcggcatc ttgcactaat aatccgccgt ttacccgttt gaaatctaag cgttttacag
     3301 cttctgagaa ctcgccacat tcaagcacac gcacgttttt cttagtggct aacacttctt
     3361 tggcagaagc agaaacggtt ggtgcaataa tcacttcaac aaattgacgg tctgcgatgg
     3421 tttgagcagt ttcgccgtct aattcacggt taaaggcaat aatgccaccg aaagcagaag
     3481 ttggatcggt ttggtaagca cggttgtagg catctaaaat atttttaccc aaagcaacac
     3541 cacaagggtt agcgtgtttt acaatcacac aagcaggctc gctaaattct ttcacgcatt
     3601 caagagccgc atcggtatct gcaatattat tatacgaaag ggctttacct tgtaactgtt
     3661 tggcggtgga aacagaggct tcttttaact cattttcgac atagaatgca gcgttttgat
     3721 gcgaattttc gccataacgc atcgtttgtt tacgcacaaa attgaggttt aaggtgcgag
     3781 ggaattgtcc acttggttgg gttaaatctt cttcctcagc cccttgataa ggcggcactt
     3841 tttgcccgaa atagttggca atcattgaat cgtattgtgc ggtatgctca aacgctttaa
     3901 tagcaagatt aaaacgggtt tctaaagtta aactgttttg atgttgatcc atttcggcaa
     3961 gaatagcatc aaaatcattg ttattgacca caatcgccac atctttatga tttttcgctg
     4021 cagaacgcac cattgtcgga ccaccgatat caatattttc caccgcatct tcaaggctac
     4081 aatttggatt ggcaacggtt tgagcaaaag ggtagaggtt tactaccacc atatcaattc
     4141 gttcaatgcc gtgttggttc atcacttcat catcagtacc acggcgacct agaattccgc
     4201 cgtgcacttt cgggtgcagg gtttttacac gcccgtccat catttcagga aagccggtgt
     4261 aatctgatac ttctgttact agcaaaccgg cttcagccag taattttgcg gttccgcccg
     4321 tagaaagtaa ttttacccca cgagccgata gcccacgagc aaattcgaca atgccttttt
     4381 tatcagacac acttaataac gcctgttgaa tcgccattct taaattcctt aaaatgagtg
     4441 ttaacgtgaa aataaacggc aaagattata acgcaaacgt ttgctttttt catctacaag
     4501 tggtcgattt tgcaaatttt tctgcaaaat cgaccgcttg cactcgtgat taaagcgggt
     4561 agaatagagg aaaaaaatcg gaggaactat gattaaccac aatttagcag atttcgtatt
     4621 tgagtatttt accgaaaaca acctaaaagc aggcacacta cgttatcgct acataaaaga
     4681 gaacgtgatt gatgcttaca gtacccgagt agatgatgcc tttcaaggta aaggtattgc
     4741 aggagagctt tacaatgctt taattgcgtt tgcgcaagaa aaagggctga aaatcaagcc
     4801 aagttgtagt tatattgagg taaaaatgca acgaagtcat cgagatttaa ttgcttagag
     4861 aggagcaagc ggtcgtaaaa tttcaaaaat ttacgaccgc tgtcttattc aattctcaaa
     4921 aatccatcac acaaaatata agccctattc attaaacaac gccatataaa acttattttc
     4981 aaatgtatta agcggagccc gtttggtttt gctttcgagc tcgccggtgg aatagccgtt
     5041 aataaattgc acaaaagcga tgcgttcgcc acgggcgttt ttcataaagc cggcaaggtt
     5101 gtaaacccct ttcagtgagc cggttttggc aatcagattt ttggcaagcg gttctgttga
     5161 aatagagcct ctgccggaaa tagtaccgtc cacgcctgca atcgggaagg tttcaaacag
     5221 ttttaagctt tcttcgtttt gagcgatata ttcaagggtc tccagcattg ttcggctgct
     5281 gacttgatta tgacgggaaa gccctgagcc atcagccacc acgctgtttt taaaatcaat
     5341 attggctttg gtttttaata actggcgaat cacataacta cctaattgga acgatgcggg
     5401 gcggttgtgt tgcttgttgg caacggttct aaacagggca tcggcaattt ggttatccga
     5461 ttttttcatc atttttttca ataataccgg caacggctcg gaataatgct cggcaagtag
     5521 cgtgccgttt tgggcagtaa gtggctcttt tacttgcccg ttaaaggcaa ttttcaggct
     5581 ttttaactgg gctttaagca tatttgcccc gtaattagtt gggtcttgca ccgaaaaact
     5641 taagccgaac ggttgagact ggcgagccat acagcctttg atttggtagc ggttgttatc
     5701 gtgaaccacc acatcaagct ggcaaaacgg agcttctttc ggctcgacaa tataagcaga
     5761 gctaaacacc tgcaccggat aagcggacgg cacattcact ttagcaaatt cgccaatggg
     5821 ttggtcggca tttaaggtga cataaaaaca gttgtgatcc acattaattg ccgccggtgg
     5881 ggcgttaaag cacatcgtca agtcgttcca aatccaaccg gaggctttgt cgtggctggc
     5941 gaaaaccgac gggtctagaa ttaaatcccc ctcaatttta ttgatacctt gttgctttaa
     6001 tttgctcatt aattgataaa tttgaccgct tgtaagctca gggtcgccac taaaacgggc
     6061 aattaaattg ccttttaaca ctccgttttc tacttttccg ttggttaaaa gggcagtttg
     6121 aaagcggaaa tcatcgttta aagttaattt tgctgccagt gccgtaaaga ctttttgggt
     6181 actggcaggt agcataaaaa tatcactttg gtattgggtg atgatttggt tagtgtctaa
     6241 atttttagca ataaaactaa cagaagtacc ggcaggcaag gtatttaata attcttcggt
     6301 attaatttca gcctgtgtaa tgcttggaat cagaagtgta gataagataa atttatttaa
     6361 aaaa
//
LOCUS       DANLZQ010000129         6354 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.129, whole genome shotgun sequence.
ACCESSION   DANLZQ010000129 DANLZQ010000000
VERSION     DANLZQ010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6354)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6354)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6354
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.129"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(14..415)
                     /locus_tag="PXE50_002354"
     CDS             complement(14..415)
                     /locus_tag="PXE50_002354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="H-NS histone family protein"
                     /protein_id="HDL5623210.1"
                     /translation="MSALKSLLNIRSLRALAKDLALEQLKSISEKLDIIIAEKEEEMK
                     QEELEKLKQLESLNKYREMLKQDGLSIDELAELLADKVIKTRKALSPRPAKYKFVDAN
                     GNEKTWTGQGRTPKALQDALDSGKKLEDFAI"
     gene            852..2384
                     /locus_tag="PXE50_002355"
     CDS             852..2384
                     /locus_tag="PXE50_002355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HDL5623211.1"
                     /translation="MNLVDYSTSLWSVLPALIALILAIVTRKVIISLSIGILFGAFML
                     TNSNFLDALTYIKNSVVSLVYKGAEEGLNSNNVNIILFLLLLGVLTSLLSISGSNQAF
                     ANWAQKKVKGKRGAKLMAAGLVFFTFIDDYFHSLAVGAIARPVTDKFRVSRAKLAYIL
                     DSTAAPMCVLMPISSWGAYIITLIAGLLATHSITGYSPLGAFMTMSAMNFYAIFAMIM
                     VFFVAYFSFDIGSMARFERQAAHLAELDDEQIETKGHVRDLILPIIALIVATVSMMMK
                     TGADALAESGASFSILGAFENTTVGISLVVGGVAGLIVATICIITSGNISFKNYVRAY
                     GLGVKMMSGAITILFFAWTINGVVSDMQTGKYLSGLVAESIGAEFLPAILFVLAAAMA
                     FSTGTSWGTFGIMLPIGASMAVHSDPALIIPCLSAVMAGAVCGDHCSPVSDTTILSST
                     GAQCNHMDHVISQLPYALLVATASIIGYLVVGFTQSAVLGFIATAVVMAILILLFKEK
                     KH"
     gene            2610..3362
                     /locus_tag="PXE50_002356"
     CDS             2610..3362
                     /locus_tag="PXE50_002356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDL5623212.1"
                     /translation="MKIALVTGVTAGFGLAICKLLLQSGYKVIGTGRRAERLEELHLQ
                     FGDKFLPLAFDIQQPDEVEKALNSRPKAWQQIDLLVNNAGLALGLEPAQKADLNDWYQ
                     MIDTNIKGLVTMTRLVLPEMVERKSGHIINIGSIAGTYPYPGGNVYGGTKAFVKQFSL
                     NLRADLAGTKVRVSNVEPGLCGGTEFSNVRFKGDDEKAAKVYENVQFVRPEDVANIVL
                     WLNQQPEHVNINRVEVMPVAQTSSALNVARNI"
     gene            3374..4564
                     /gene="trpB"
                     /locus_tag="PXE50_002357"
     CDS             3374..4564
                     /gene="trpB"
                     /locus_tag="PXE50_002357"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HDL5623213.1"
                     /translation="MSDTLLNPYFGEFGGMYVPEILVPVLKELEQAFVDAQQDPTFQA
                     EFADLLKNYAGRPTALTLCRNLTKGSKTKLYLKREDLLHGGAHKTNQVLGQILLAKRM
                     GKTRIIAETGAGQHGVATALACAMLGMPCVVYMGAKDVERQSPNVFRMRLMGAEVIPV
                     QKGSCSLKDACCEAMRDWAANYDTTHYLIGTAAGPHPFPTMVREFQKMIGEEIKRQIL
                     AKEDRLPDAVIAAVGGGSNAIGMFADFIEEQSVKLIGVEPAGKGIETGEHGAPLKHGT
                     TGIYFGMKSPIMQDKDGQIEESYSISAGLDFPSVGPQHAYLNATGRAEYVSITDAEAL
                     EAFQALAKNEGIIPALESSHALAYALKMIKQNPEKEQLLVVNLSGRGDKDIFTVDKIL
                     NGGE"
     gene            4566..5372
                     /gene="trpA"
                     /locus_tag="PXE50_002358"
     CDS             4566..5372
                     /gene="trpA"
                     /locus_tag="PXE50_002358"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HDL5623214.1"
                     /translation="MSRFDTLFTALKAKNEGAFVPFVTLCDPGFERSFEIIDTMIKNG
                     ADALELGFPFSDPLLDGPVIQAANKRALDGGYSTDSCFELIAKIRAKYPDIPIGLLLC
                     ANLIFVPTAEVFFQRCQQSGVDAVLIADLPVFAAQEFVPTAEKYGIQPVFICPPNADQ
                     NTIERIAQLTQGYTYLVSRAGVTSAENQAHASNLDNLVESLKQAGAAPILQGFGIAKP
                     EQVKEALRLGADGAISGSAIVKIIERNLADQANLLKELAEFVQVMKAATK"
     gene            5422..>6354
                     /locus_tag="PXE50_002359"
     CDS             5422..>6354
                     /locus_tag="PXE50_002359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HDL5623215.1"
                     /translation="MKLTKIVLSVVAVIGAVAVGGSWYTGKQVEEKYQELVVQANNQL
                     KQLSGEFGANIELKDVQIDRHFFISNAKYRLEVDLGNGKKLDFVGNDKLHHGPLPLNR
                     LAKLNLAPVMMSAESKLQAPEALKKLMGEHIGTGFSNISYSGDVEGHFDISPIKHSDE
                     TGHIETTPIKVQYSYDQKLKGVDSTVELESLKIKAEEFDFQIQGIVYDVQTENNESYP
                     NLTLGKGSGKINAIEFKSKDGKLSQIKDVVVKGDNLLKGDRLISTGDLEAATFNIEGV
                     EMGKLKMDMAYDLDAKLTNDITPLLSNPQTLENEK"
BASE COUNT         1866 a         1101 c         1393 g         1994 t
ORIGIN      
        1 tagttatagc caattaaata gcaaaatctt ctaatttttt accactatct aaagcatctt
       61 gtaatgcctt tggtgttctg ccttgacctg tccaagtttt ctcattgccg ttagcatcaa
      121 caaatttata tttagccggg cgaggtgata gtgctttgcg ggttttgatt actttatctg
      181 ctaataattc agctaattca tcaatagata acccatcttg ttttagcatt tctctatatt
      241 tatttaaact ttctagttgt tttagttttt ctaattcttc ctgtttcatt tcttcttctt
      301 tttcagcaat aattatatct aatttctcag aaattgattt taattgctct aatgctaaat
      361 ctttagccaa agcccttaag ctgcggatat tcaaaagact ttttaaagct gacattttac
      421 tctcctaaat taatgtttta tataagtagc ttttatgctc cttttatcat atctcaaaag
      481 gcattttagg taaataagca taaataaaaa aatagatact ttatatctaa agatattcgt
      541 gctatcttaa acactgtcct acaaattgta gaggtgcgaa ttcaataagt atttcttctg
      601 agtggaaaac gatgaagggg aaggaaaggt gaatttgccg aaatcaatta agcgtcatct
      661 taattggttg gggtcgttgt cgaaagaaac gacactgtcg tagtaaatgc tacggagtgc
      721 tactgttagg gtgggtttca gatatttcac atttgccttc ctttcatatt tatttttata
      781 aatatcccag tagatctctt gtttggctat tcttatttat acaaattata cacagtcatt
      841 ttagaggttt tatgaatcta gttgattatt ctacgtcact ttggtcggta ttgccggcac
      901 tgattgcgct aatattggca attgtgacac gcaaggtgat tatttcactt agcatcggta
      961 ttctctttgg tgcatttatg cttactaata gcaattttct tgatgcactt acttatatta
     1021 aaaatagcgt tgtttcttta gtttataaag gggctgaaga aggattaaat tcaaataatg
     1081 ttaacattat tttatttttg cttttattag gggtattaac gtcattatta agtatttcag
     1141 gtagtaatca ggcgtttgcg aattgggcgc agaaaaaggt aaaaggcaaa cgaggcgcaa
     1201 aattaatggc ggcaggtttg gttttcttta cctttattga tgactatttc cacagtttag
     1261 cagtaggtgc gattgcccgc cctgttacgg ataaattccg tgtttctcgt gctaaattag
     1321 cttatatttt agattctacc gccgctccaa tgtgcgtgtt aatgccaatt tcaagctggg
     1381 gggcttatat tattacctta atagctggct tattggctac gcattccatc acaggctatt
     1441 cgccactagg cgcatttatg acaatgagcg caatgaactt ttacgccatt tttgcgatga
     1501 ttatggtgtt ctttgtggca tatttctcat ttgatattgg ttcgatggcg cgttttgaac
     1561 gtcaagcagc gcatttagca gaattagatg atgagcaaat tgaaacgaaa ggacacgtgc
     1621 gcgatttgat tttgccaatt attgcactta ttgttgctac agtctcaatg atgatgaaaa
     1681 caggtgcaga tgcactggcc gaatcaggtg cttcattttc tatactaggt gcttttgaaa
     1741 atactacggt aggcatttca ttagttgttg gtggtgtggc agggcttata gttgcaacta
     1801 tttgtatcat tacaagcggt aatatttctt ttaaaaatta cgtccgtgct tatggcttag
     1861 gtgtgaagat gatgtctggt gcaatcacta ttctcttctt tgcgtggaca ataaacggcg
     1921 tagtaagtga tatgcaaaca gggaaatatc tatcaggatt ggttgcagaa agcattggag
     1981 cagagttttt acctgcaatt ctatttgtgt tagccgcagc aatggcgttt tcaacaggaa
     2041 ctagctgggg aacatttggt attatgttgc caattggagc ctcaatggca gtgcattcag
     2101 atccagcatt aattattcct tgtttatctg cagtaatggc tggtgcggtt tgtggtgatc
     2161 actgttctcc agtatctgat accactattc tttcttcaac aggcgcacaa tgtaatcata
     2221 tggatcatgt catttctcaa ttaccttatg ctttattagt tgcaacagct tctattattg
     2281 gttacttagt ggttggcttt acccaatcag cggtattggg atttattgct acagctgttg
     2341 ttatggcaat actcattttg ctttttaaag aaaaaaagca ttaatttccg aaaatgtgaa
     2401 gggaatcaca gaatgagatt tattgatgag ataaaatagc actcaagata tggatatcga
     2461 atgttgtgtt atataaatct taaaataaga tcctcctagc attagcgtac cttttggtac
     2521 gcttttttct tttatggcaa tattatttct tgcaatttta atttttttgt actactttaa
     2581 tagtacattt taaatttgag ggtgaaaaga tgaaaatagc attagtcaca ggagtaactg
     2641 ctggatttgg gttggcaatt tgtaaattat tgcttcaatc gggttataaa gtaattggca
     2701 cgggcagacg ggcagagcgt ttagaagaac tgcatttaca atttggcgat aaatttctac
     2761 cgcttgcatt tgatattcaa cagcccgatg aggtggaaaa agcactgaat agccgcccta
     2821 aagcgtggca acaaattgat ttattagtaa acaatgcagg ccttgcactc ggcttagaac
     2881 cggcacagaa agcagatttg aacgattggt atcaaatgat cgataccaat attaaaggat
     2941 tggtaacgat gacacgctta gttttgcctg aaatggtgga gcggaaaagt gggcatatta
     3001 ttaatatcgg ctcgattgcc ggcacttacc cttacccggg cggtaatgta tatggtggta
     3061 ctaaagcctt cgtgaaacag tttagcctaa atttgcgggc agatttagcc ggcactaaag
     3121 tgcgtgtttc caatgttgag ccggggctat gtggcggtac ggaattttca aatgtacgct
     3181 ttaaaggcga tgatgaaaaa gcggctaaag tttatgaaaa cgtgcagttt gtgcgcccgg
     3241 aagatgtggc aaatattgtg ctttggctga atcagcaacc tgaacacgtt aatattaatc
     3301 gggttgaagt gatgccggtg gctcaaactt cttctgcctt aaatgtagcg agaaatattt
     3361 aaaaggaaat attatgtcag acacacttct taatccttat tttggtgaat ttggtggtat
     3421 gtatgtgccg gaaattttag tgccggtgct aaaagaatta gaacaagcct ttgtagatgc
     3481 tcagcaagac ccaacattcc aagctgaatt tgccgattta ctcaaaaact atgccggtcg
     3541 cccgactgct ttaacccttt gtcgtaattt aaccaaaggc agtaaaacca aactctattt
     3601 aaaacgtgaa gatcttttac acggtggggc acataaaacc aaccaagtgc tagggcaaat
     3661 cttactcgct aaacgaatgg gtaaaacccg cattattgcc gaaacaggag caggacagca
     3721 cggtgtggca accgcattag cgtgtgcgat gttaggaatg ccttgcgtgg tgtatatggg
     3781 cgcaaaagat gtagaacgcc aatcgccaaa tgtattccgt atgcgtttaa tgggagcgga
     3841 ggtgattccg gtacaaaaag gctcttgctc gctcaaagat gcctgttgcg aggcaatgcg
     3901 ggattgggcg gcaaattatg atactaccca ttacctaatc ggcactgcag ccggcccgca
     3961 cccgttcccg acaatggtgc gtgaatttca gaaaatgatt ggcgaagaga tcaaacgtca
     4021 aattttagca aaagaagacc gcttgcctga tgcggtgatt gctgccgtag gcggtggctc
     4081 aaatgctatc ggtatgtttg cagattttat cgaagagcaa tccgtcaaat tgatcggtgt
     4141 tgagccggca ggaaaaggaa ttgaaaccgg tgaacacggt gcaccgctca aacacggcac
     4201 aacggggatc tatttcggta tgaaatcgcc gattatgcag gataaagacg ggcaaattga
     4261 agagtcttac tccatttcag ccggcttaga tttcccttct gtcgggccgc aacacgctta
     4321 tttaaatgcg acagggcgag ctgaatatgt atcgattacc gatgcagagg ctttagaggc
     4381 attccaagca ttagccaaaa atgaggggat tattccggcg ttagaatctt cccacgcctt
     4441 agcctatgcg ttaaaaatga ttaagcagaa ccctgaaaaa gagcagttat tagtggtgaa
     4501 tttatcgggt cgaggcgata aagacatttt caccgtggat aaaattttaa atggaggaga
     4561 gtaaaatgag ccgctttgat acgctattta ctgcattaaa agcaaaaaac gaaggggctt
     4621 ttgtgccgtt tgtgacatta tgcgatcctg gttttgaacg cagttttgag attatcgaca
     4681 cgatgattaa aaacggggct gatgctttag agctaggctt tccgttttct gaccccctct
     4741 tagacgggcc ggtgattcaa gcagcgaata aacgagcttt agatggtggc tatagcactg
     4801 atagctgttt tgagctgatt gccaaaattc gagctaaata tccagacatt cctatcggtt
     4861 tactactgtg tgccaattta atttttgtgc caaccgcaga agtatttttc caacgttgcc
     4921 aacaaagtgg agttgatgcg gtgttgattg ctgatttgcc tgttttcgct gctcaagagt
     4981 ttgtgccaac cgctgaaaaa tatggaattc agccggtgtt tatttgcccg ccgaatgctg
     5041 atcaaaacac cattgaacgg attgctcaat taacccaagg ctacacttat ttagtttccc
     5101 gtgccggtgt aactagtgct gaaaaccaag ctcacgcaag taatttggat aatttagtgg
     5161 aaagtttaaa acaagccgga gctgccccta tcttacaagg ttttggcata gccaaacctg
     5221 aacaggtaaa agaggcgtta aggcttgggg cagacggggc gatttcaggc tcagcgattg
     5281 tgaaaattat tgaacgtaat ttagctgacc aagctaattt gctcaaagaa cttgccgaat
     5341 ttgtacaagt gatgaaagcg gctacgaagt aaactacaag cggtcatttt ttaaattttt
     5401 ttgaaaataa aaggaaacag aatgaaatta acaaaaattg ttctttcagt tgtagcggta
     5461 attggtgctg ttgcagttgg cggaagttgg tacacaggta agcaggttga agaaaaatat
     5521 caagaattgg ttgttcaagc taataaccaa cttaaacaac tgagtggcga atttggtgcg
     5581 aatattgagc ttaaagatgt gcagatcgat cgccatttct ttatctctaa tgcgaaatat
     5641 cgtttagaag tggatttggg taatggtaag aaattggact ttgttggtaa tgataaactt
     5701 catcacggtc cgctaccgct taatcgttta gcgaaactta atttagctcc tgtaatgatg
     5761 agtgcggaaa gcaaattaca agctcctgaa gcccttaaaa aattgatggg tgaacatatt
     5821 ggcaccggtt tttctaatat cagctattcg ggcgatgtgg aagggcattt tgatatttcc
     5881 ccgattaaac atagtgatga aacaggtcat attgaaacca cgccaatcaa agtgcaatat
     5941 agctacgacc aaaaattaaa aggggttgat agcactgttg agctagaaag tcttaagata
     6001 aaagcagaag aatttgattt tcaaattcaa ggtatagttt atgatgttca aacagaaaat
     6061 aatgaaagtt atcctaattt aactttaggc aaaggtagtg gaaaaattaa cgctattgag
     6121 tttaagtcta aagatggcaa attatctcaa attaaagatg ttgtggtgaa gggcgataat
     6181 ctattaaaag gcgatcgttt aatttctacc ggagatttag aggcagccac tttcaacatt
     6241 gagggtgttg aaatgggtaa attaaaaatg gatatggcat acgatttaga tgctaaatta
     6301 accaatgata ttacgccttt attatctaat cctcaaacat tagaaaatga aaaa
//
LOCUS       DANLZQ010000130         6258 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.130, whole genome shotgun sequence.
ACCESSION   DANLZQ010000130 DANLZQ010000000
VERSION     DANLZQ010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6258)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6258)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6258
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.130"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            17..1285
                     /locus_tag="PXE50_002360"
     CDS             17..1285
                     /locus_tag="PXE50_002360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malic enzyme"
                     /protein_id="HDL5623216.1"
                     /translation="MSDLKQQALDFHEFPIPGKISVTPTKALDTQHDLALAYSPGVAE
                     PCLAIEKDPSASYRYTARGNLVAVISNGTAVLGLGNIGALASKPVMEGKGVLFKKFAG
                     IDVFDIEINETDPEKLVEIIASLEPTFGGINLEDIKAPECFYVEQKLRERMGIPVFHD
                     DQHGTAIITGAAVINGLQVVGKAISEVRLVVNGAGASAIACTNLLRSLGVKKENITMC
                     DSKGVIFQGRGDKMDETKQFYAIEDNGWRTLADAVANADVFLGCSKGGALTQEMVKTM
                     AKDLLILALANPVPEITPAEAKAVRPDAIVCTGRSDFKNQVNNVLCFPFLFRGALDVG
                     AKTINEEMKMAAAHAIAELAKEPVPFEVISTYGELSFGPEYIIPTPFDPRLIVNVSIG
                     VAKAAIQSGVATRPITDWEAYAEQLKKLVA"
     gene            1437..1724
                     /gene="rplY"
                     /locus_tag="PXE50_002361"
     CDS             1437..1724
                     /gene="rplY"
                     /locus_tag="PXE50_002361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005625668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25"
                     /protein_id="HDL5623217.1"
                     /translation="MSFKFEAEVRSAQGKGASRRLRHNGQVPAIIYGGNAEPVSIILD
                     HDKVNNAQVHDSFYNEVLTIVVAGKEEQVKVQAIQRHPTKPKLVHLDFKRA"
     gene            complement(1883..2923)
                     /locus_tag="PXE50_002362"
     CDS             complement(1883..2923)
                     /locus_tag="PXE50_002362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL5623218.1"
                     /translation="MARPRKYENNGLPQNLLCRRRKRANGSIVEYYFYVLADGKERSL
                     GTNKHEAILEAAKLNFENSRKSPIVLFIDVAKRYELEVVPTKKAKNTRQSNLQAIHWL
                     CKFFGNPPAPLEKIEPKHISQYLQWRKDTPAVANIEVGLFNTIWNMAREWGYTALPSP
                     SQGVKKFPTKYREVYVEDYILDKIYEFADERMADIIETAYLLGQRPIDICNIHRSHIY
                     DGILHITQQKTGKKVRFEISGRLKEILDKRLGYESDWIFTNKWGKKLKRRSLGDHFKE
                     IRERAMKAYPELADEIAKVQMRDMRAKAATDISLMTTDEQAQKQLGHTSKRMTHHYIR
                     KDKILKPTDEIT"
     gene            complement(2945..3166)
                     /locus_tag="PXE50_002363"
     CDS             complement(2945..3166)
                     /locus_tag="PXE50_002363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4224 domain-containing protein"
                     /protein_id="HDL5623219.1"
                     /translation="MNIYTDFLSREEIEFITQCKQKNLIKKQLNIMGIPFKENANGFP
                     VVRRDYAQAKQRKPIATNDSDWVSNAFKA"
     gene            complement(3216..3599)
                     /locus_tag="PXE50_002364"
     CDS             complement(3216..3599)
                     /locus_tag="PXE50_002364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623220.1"
                     /translation="MHIEDKIAWWLANGETGVSSKTMAFYLGYGIRPKIEGYPHDVSD
                     FRRCFLLLETVPFLRNRIEKMAELGKVWAALAKEWHTLEALYNEEEDQIRCPKTYAKL
                     REILEANEENVVRIGNVSISIGSTT"
     gene            complement(3687..3863)
                     /locus_tag="PXE50_002365"
     CDS             complement(3687..3863)
                     /locus_tag="PXE50_002365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623221.1"
                     /translation="MTEEDKEYLQTKIENEGFEYAFVSYSDFEEVQDEKFHGLRKAYL
                     KARSELAEYIDIED"
     gene            complement(4117..4818)
                     /locus_tag="PXE50_002366"
     CDS             complement(4117..4818)
                     /locus_tag="PXE50_002366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623222.1"
                     /translation="MSTQISTQTISFNNQALITFEQNGTHYTAMKPICENIGLTWHAQ
                     YERIKRDEILSQGILIIRIPTNGGDQQMICLPIEYLNGWLFGIDINRCKPEIRETLIK
                     YKKECYQALHDYWFKGKAERSQIAPIVEPKIPMELTKKEWLRFASMWYALYNSLEVLA
                     TLEKPLRAIGSPFGATAYTHATEYQTTLGVMKRILEPMLADFEVDPFEEAHYHKALTT
                     LRQYQPKGLGGLVRI"
     gene            5363..5578
                     /locus_tag="PXE50_002367"
     CDS             5363..5578
                     /locus_tag="PXE50_002367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623223.1"
                     /translation="MQTEKRGRGRPKSGLTLQELQAKSDAKRGVRLKSFKFHEDFIAQ
                     LEQLAEQHGISQTQVIVQAVEQFSKGA"
     gene            complement(5630..5848)
                     /locus_tag="PXE50_002368"
                     /pseudo
     CDS             complement(5630..5848)
                     /locus_tag="PXE50_002368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014390712.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="KilA-N domain-containing protein"
     gene            6040..6228
                     /locus_tag="PXE50_002369"
     CDS             6040..6228
                     /locus_tag="PXE50_002369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623224.1"
                     /translation="MKELFKQWLINQDSPFINSCGVECILSKVDDRLNIINANEEETE
                     TLIEWRNAFLQDVSVFIA"
BASE COUNT         1717 a         1181 c         1326 g         2034 t
ORIGIN      
        1 ttataaggtt tctaaaatga gcgatttaaa acaacaggcg cttgattttc acgagttccc
       61 aatccccgga aaaatttccg ttactcctac taaagcatta gatactcagc acgatttagc
      121 tttagcgtac tctcctgggg ttgctgagcc ttgcttagcg attgaaaaag atccttcagc
      181 ttcttatcgt tatacggcac gaggtaactt agttgcagta atttctaatg gtacagcagt
      241 gttaggctta ggcaatattg gtgctttagc aagtaagcct gtgatggaag gcaaaggtgt
      301 tctatttaag aaatttgccg gaattgatgt gtttgatatt gaaattaatg aaactgatcc
      361 ggagaaatta gtggagatta ttgcatcgtt agaaccgact tttggtggta ttaatctgga
      421 agatattaaa gcacctgaat gtttttatgt agagcaaaaa ttacgtgaac gtatgggaat
      481 ccctgtgttc cacgatgatc aacacggtac ggcaattatt accggtgcgg cggtgattaa
      541 cggattacaa gtggtaggta aagcaatttc agaagtacgt ttagtggtaa acggtgctgg
      601 agcatcagcg attgcgtgta ctaacttact ccgttcatta ggtgtgaaaa aagaaaatat
      661 cacaatgtgc gattctaagg gcgttatttt ccaaggtcgt ggtgataaga tggatgaaac
      721 caaacaattc tatgcaatag aagataatgg ttggagaaca ttggcagatg ccgttgcgaa
      781 tgcagatgtt ttcttaggtt gttcaaaagg cggagcttta acgcaagaaa tggttaaaac
      841 aatggcaaaa gatctattaa ttcttgcttt agcgaaccct gtgccggaaa ttacacctgc
      901 tgaagcgaag gctgtccgtc cagatgcgat tgtatgtacc ggtcgttcag actttaaaaa
      961 ccaagtgaat aatgtgcttt gtttcccgtt cttattccgt ggagcattag atgttggggc
     1021 aaaaaccatt aatgaagaaa tgaaaatggc agcagcccat gcgattgcag agttggctaa
     1081 agaacctgtg ccgtttgaag ttatttcaac ttatggcgaa ttatcgtttg gcccggaata
     1141 tattattcca acgccatttg atccacgttt gatcgtgaat gtctcgattg gtgtagcaaa
     1201 agcagcaatt caatcaggtg tagcaactcg accaattaca gattgggaag cttatgcaga
     1261 gcagttgaaa aaactggttg cttaatattt ttacattgca tttttctgca acttcagtaa
     1321 aatacgtagt tggcatatcg agacggatat gccgatattt tttcggaaac agctgggtcg
     1381 cctgctgttt tttctattca cggggatttc cccattttat ttaagagaat aaaactatgt
     1441 cattcaaatt tgaagctgaa gttcgttctg cgcaaggtaa gggtgcgagc cgccgcctgc
     1501 gtcacaatgg tcaagttcct gcaatcatct acggtggtaa tgcagagcct gtatcaatca
     1561 ttttagatca cgataaagtg aacaacgcac aagttcacga ttcattctat aacgaagtat
     1621 taactatcgt tgttgcaggt aaagaagagc aagtaaaagt acaagcaatt caacgccacc
     1681 caactaaacc aaaattagtt cacttagact tcaaacgtgc ttaatccttg atttacaagg
     1741 gtttaacgct gttttctgtt ccgaaacttt ttgcgatttt atagtttttt aggtcaataa
     1801 aatcaattat ttacaaaata gtttcggaac ggattttagg tgagtaaatg gctcttttgt
     1861 atttggcaaa agggctttat ttttaggtga tttcatcggt aggtttgagg attttgtctt
     1921 ttctgatgta atgatgtgtc attctttttg atgtatgccc aagttgtttt tgagcttgtt
     1981 catcggttgt cattagggaa atatcggtgg ctgctttggc acgcatatca cgcatttgta
     2041 ctttagcgat ttcatcagca agttcaggat atgctttcat tgctctctcc cttatttctt
     2101 taaaatgatc gcctaaactt cgccgtttta attttttccc ccatttattg gtaaaaatcc
     2161 agtctgattc gtatcccaac cttttatcta aaatttcttt tagccgacca ctaatttcaa
     2221 atctcacttt tttccctgtc ttctgttgag taatatgcaa tataccgtca tagatgtgtg
     2281 agcggtgtat attacaaata tcaatcggtc tttgtcccag caaataggct gtttcgataa
     2341 tatccgccat tctttcatct gcaaattcat agattttatc aaggatataa tcctctacat
     2401 aaacttcacg atatttggtc gggaattttt ttacaccttg tgatgggctt ggaagagcag
     2461 tgtatcccca ttctcttgcc atattccaaa ttgtgttaaa taaacctacc tcaatattag
     2521 caacagccgg cgtgtctttt ctccattgta aatattgact gatgtgcttt ggctcaattt
     2581 tttcgagcgg tgcaggtggg ttaccaaaga atttacatag ccaatgaata gcctgtaaat
     2641 tagattgacg agtgtttttg gcttttttgg ttggaacaac ttccaattca tagcgttttg
     2701 ccacatcaat aaataaaaca attggggatt ttctactatt ttcaaaattt agcttggctg
     2761 cttctaaaat tgcttcgtgt ttgtttgtac cgagagacct ttctttgccg tcggcaagaa
     2821 cgtaaaagta gtattcaact atacttccgt ttgctcgttt tctgcggcgg cagagtaggt
     2881 tttgtggcaa tccgttgttt tcatattttc gagggcgtgc cataagtgcc tccttcttct
     2941 caatttacgc tttaaatgca tttgataccc agtcagaatc attcgttgca ataggtttac
     3001 gctgtttagc ctgagcataa tcacggcgga caacagggaa tccatttgca ttttctttaa
     3061 atggaatgcc cataatgttg agttgttttt tgattagatt tttctgcttg cattgagtaa
     3121 taaattcaat ctcttcacga gaaaggaagt cagtgtagat gttcatattc tctccaaata
     3181 aacccctcat ttagagggat ttggttaaat aatcgttaag tcgttgaacc tatcgaaatg
     3241 ctcacattac cgatgcggac aacattttct tcgttggctt ctaggatttc tctcaactta
     3301 gcataggttt tggggcatct tatttgatct tcctcttcgt tgtagagagc ctctaatgtg
     3361 tgccattctt ttgcaagtgc agcccaaact ttcccaagtt cagccatttt ttcaatccta
     3421 tttcgcaaaa aagggactgt ctccaacaac agaaagcaac gcctgaaatc cgatacatcg
     3481 tgtgggtagc cttctatttt tggtcttatt ccgtaaccaa ggtaaaaagc cattgtttta
     3541 ctgcttaccc ctgtctctcc attggcaagc caccaagcga ttttgtcttc tatgtgcatt
     3601 tttcctccaa aaattaaccg cttgcagtta gctacaagcg gttggttgtc aagtgttcat
     3661 ttgttcaatg aacagttcat cagtggttaa tcttcaatat caatatattc cgctaactca
     3721 cttcgagctt ttaaataagc cttgcgaagc ccgtggaatt tttcatcttg gacttcttca
     3781 aagtcactat aactgacgaa agcgtattca aaaccttcgt tttcaatttt agtttgaaga
     3841 tattctttgt cttcttctgt catttcgttt ctcctattga gagtggataa aaataaacac
     3901 tgcacgggca gggtcgggga agcattatcg ctgtgcgata gtgcatggtt tgccatcgca
     3961 gtcgttgtgt aactctaagt agtcggcagc aactgcaaag gcggttaaaa agagtatgat
     4021 ttttgcgtat ttcatcgcct aatccttgaa ttttgggtgc aggaaaccgc cgcttgatgt
     4081 ttcacaagcg gtcggattgt gtgatttttt tgcaaattaa attcggacta agccgcctaa
     4141 gcctttcggc tggtattgcc ttaaggtagt tagggctttg tggtagtgag cttcttcaaa
     4201 cggatcgacc tcgaagtcgg ctaacatcgg ttcaagtatc cgtttcatta cgccaagcgt
     4261 ggtttgatac tcggtggcgt gagtgtaggc ggttgcccca aacggcgaac cgatagcacg
     4321 caacggtttt tctaacgtag caagtacttc aaggctgttg tagagggcgt accacattga
     4381 agcgaaacgt agccattctt ttttggttag ctccattggg attttaggtt cgacaatcgg
     4441 ggcgatttgt gaacgttccg ctttgccctt gaaccagtaa tcgtgcaggg cttggtagca
     4501 ctcttttttg tatttgatga gcgtttctct gatttcgggt ttgcagcgat tgatgtcaat
     4561 gccgaagagc cagccgttga ggtattcaat tgggaggcag atcatttgtt gatcgccacc
     4621 gtttgtaggt attcttatga taagaatacc ctgcgaaagg atttcatctc gtttgatccg
     4681 ttcgtattga gcgtgccaag tcaagccgat attttcgcag atcggtttca ttgcggtgta
     4741 atgtgtgccg ttttgctcga atgtgattaa ggcttggttg ttgaaagaaa tggtttgagt
     4801 agaaatttga gttgacatag tcgtaatcct tagagtctat ttgtttaaaa caagccactt
     4861 tcgacagtgg cgtcgggagg ttcgaaaacc cactctaagg taagggctgg acgtatttcc
     4921 tttcggtctt gtattagtcg ccctcccgac atagtcagga ttacggatat aaaaaaatcg
     4981 cctagtggcg attagtgaac tatccgcctt agagtatgag gtttcgacac cttgggcgga
     5041 atagtaagtt aaagtttggc ggttgtcaaa taaaattatt ttaataaata ctaaaaaata
     5101 gcttgcgttt tatttggtat gtattaaaat aatcttgttt tcggaaaggg tctgaaaatg
     5161 aagaagccgc ccttgaagag agcggcaaac atcaggaact ggattatgta tcttaagttg
     5221 ttaatcctag tgatcttaat cttaataagc acgccagctt attagattag aaagctaaaa
     5281 gtcctagcag agaacgccat ctctgctagg cagttcctaa ataatataac gttccgtatt
     5341 aaaaatcaac aaggaattga caatgcaaac agagaaacga ggtcgtggtc gccctaaatc
     5401 aggtttaacg cttcaagaat tacaagcaaa aagcgatgca aagcgtggtg tgcgattgaa
     5461 gtcattcaag ttccacgaag attttattgc tcaacttgaa cagcttgcag aacaacacgg
     5521 catttcgcaa acacaggtaa tcgttcaagc ggttgagcag ttttcaaaag gggcgtaagc
     5581 ccctataaac ctacccttca ctgttcgatg tttttaatta gttgttgcat ttaatttggt
     5641 gtaattccac caaattaaaa tttggattat tcagctcttc ccaaacttga agaaattcaa
     5701 tggtattttt attttgaagc cagtttttaa tgagctggtc gctgtctcca aaagctttgc
     5761 acatatcagt taggctgatg taatcctcac catcacgagc ggttactttg acctccacgc
     5821 cttgtacaat cattacgcta tttgccattt cgtttctccg tttttaggta caaaaaaagc
     5881 cgttggtgga cggcttgaaa gtgcggttat cttaatccga agtttggcgg tgtcaagcct
     5941 caatatctat ttttgcgatc tgcatcgaaa aaataaattt ttgttctgac agtaaaacgc
     6001 tttcgtagta atctcataaa aaaatataag gagaacacta tgaaagagct tttcaaacaa
     6061 tggctaatca atcaggactc gccattcatt aatagctgtg gcgttgagtg tattttgtca
     6121 aaagttgatg accggctaaa cataatcaac gccaacgaag aagaaaccga aactcttata
     6181 gagtggcgga atgcttttct gcaagatgtt tcggttttta tagcttaggt actataaatc
     6241 gtcttcttta acccaaat
//
LOCUS       DANLZQ010000131         6222 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.131, whole genome shotgun sequence.
ACCESSION   DANLZQ010000131 DANLZQ010000000
VERSION     DANLZQ010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6222)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6222)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6222
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.131"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(<1..358)
                     /locus_tag="PXE50_002370"
     CDS             complement(<1..358)
                     /locus_tag="PXE50_002370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623225.1"
                     /translation="MSTTLNEINITELDAGPEIKSLSLNDAVNSFLNDSACPICGKNC
                     QYWQRLKRSLNRKENQGKGDKVLVKNPSPISIEKNLINAYKEYRKFEEDLKDKIHSQE
                     SIYDLKLAKELFHSYTN"
     gene            complement(392..1678)
                     /gene="purD"
                     /locus_tag="PXE50_002371"
     CDS             complement(392..1678)
                     /gene="purD"
                     /locus_tag="PXE50_002371"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012771675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HDL5623226.1"
                     /translation="MNILIIGNGGREHALAWKVRQSPLADKVFVAPGNAGTAMENGIE
                     NVAISATDVPALVTFAKQNSVGLTIVGPEAPLVVGVVDAFRAHGLTIFGPTQAAAQLE
                     GSKAFTKDFLARHQIPTAEYQNFTEIEPALAYLKQKGAPIVIKADGLAAGKGVIVAMT
                     LQEAEDAVRDMLSGNAFGEAGSRVVIEEFLDGEEASFIVMVDGKNVEPMATSQDHKRV
                     GEGDSGLNTGGMGAYSPAPVVTKAIHQRVMDEIIYPTVQGMASENTPYTGFLYAGLMI
                     MPNGQPKVIEFNCRFGDPETQPIMMRLESDLVELCLKACEGKLDSVQSKWCEQAALGI
                     VLAAAGYPGDYRKGDEIIGIPTSTSNQKVFLAGVEQKEGKLLTNGGRVLCATALGNSV
                     FEAQQQALQLAEQIQWQGKFYRRDIGYRAVARKQAK"
     gene            1912..2286
                     /gene="rpsF"
                     /locus_tag="PXE50_002372"
     CDS             1912..2286
                     /gene="rpsF"
                     /locus_tag="PXE50_002372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HDL5623227.1"
                     /translation="MRHYEIVFMVHPDQSEQVPAMIERYTASVKEAGGQVHRLEDWGR
                     RQLAYPINKLHKAHYVLMNVEAPQSVIDELETNFRYNDAVLRNLIVHTKAAVTEASPM
                     VKAKESKVAEAVAEVESEEAGE"
     gene            2261..2635
                     /gene="priB"
                     /locus_tag="PXE50_002373"
     CDS             2261..2635
                     /gene="priB"
                     /locus_tag="PXE50_002373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HDL5623228.1"
                     /translation="MNQRKQASNLPIDNCLILSGTVSSLVKQSLNPLGVPHYSFWLEH
                     RSIQTEVNLERQAWCKIQVVLAGNQFSYLTQQIKLGESVRIKGFIHTHKDFNGLNQLV
                     LHTEQIEFIDQEKPNGTLFPSS"
     gene            2610..2837
                     /gene="rpsR"
                     /locus_tag="PXE50_002374"
     CDS             2610..2837
                     /gene="rpsR"
                     /locus_tag="PXE50_002374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HDL5623229.1"
                     /translation="MARYFRRRKFCRFTAENVVEIDYKDIATLKNYISESGKIVPSRI
                     TGTRAKYQRQLARAIKRARYLALLPYTDNHQ"
     gene            2853..3302
                     /gene="rplI"
                     /locus_tag="PXE50_002375"
     CDS             2853..3302
                     /gene="rplI"
                     /locus_tag="PXE50_002375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HDL5623230.1"
                     /translation="MQVILLDKVAHLGSVGDQVTVKSGFARNFLIPQGKAVMATAANI
                     AHFEARRAELEAKAAAALATAQERAAKIAALAAVSVSATAGDDGRLFGSVSAKDIAEA
                     LTAAGVGVAKSEVRLGEGPLRTTGEHQVKIHLHPEVNATVAVNVVAE"
     gene            complement(3366..4142)
                     /gene="dnaQ"
                     /locus_tag="PXE50_002376"
     CDS             complement(3366..4142)
                     /gene="dnaQ"
                     /locus_tag="PXE50_002376"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HDL5623231.1"
                     /translation="MTEEKIIRQVVLDTETTGMNMAGGPPQIGHNIIEIGAVEVINRR
                     LTGRTYHVYIKPPREVDEEAIAVHGITNEFLQDKPVFAEIAEEFLDFIKGAELIIHNA
                     PFDVAFMDQEFSYLPNPPAKTAEMCTVTDSLQMARRMYPGKRNNLDALCDRLGIDNSK
                     RVLHGALLDAEILADVFLMMTGGQISLLGEEETEVVSEVIDIEEEFSAIVLNADEAII
                     LKANDEEEESHLALLKLIEKKSKGNCLWTKALTDTAEISH"
     gene            complement(4230..5900)
                     /gene="ettA"
                     /locus_tag="PXE50_002377"
     CDS             complement(4230..5900)
                     /gene="ettA"
                     /locus_tag="PXE50_002377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HDL5623232.1"
                     /translation="MSTQFVYTMHRVGKVVPPKRHILKDISLSFFPGAKIGVLGLNGA
                     GKSTLLRIMAGVDKEFEGEARPQPGIKIGYLPQEPKLAPQQTVREAVEEAVAEVKNAL
                     TQLDEVYAMYADENADFDKLAAKQAELEAIIQAHDGHNLQNQLERAADALRLPDWDAK
                     IEHLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDYEGTVVAITH
                     DRYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKEKRLAQEQAAESARQKSIEKELEW
                     VRQNPKGRQAKSKARMARFEELNSGEYQKRNETNELFIPPGPRLGDKVIEVQNLTKSY
                     GDRTLIDDLSFAIPKGAIVGIIGANGAGKSTLFRMLSGKEQPDSGSIVLGETVVMASV
                     DQFRDAMDDKKTVWEEVSNGQDILTIGNFEIPSRAYVGRFNFKGVDQQKRVGELSGGE
                     RGRLHLAKLLQRGGNVLLLDEPTNDLDVETLRALENAILEFPGCAMVISHDRWFLDRI
                     ATHILDYGDEGKVTFYEGNFSDYEEWKKKTFGEAATQPHRVKYKRIAK"
BASE COUNT         1643 a         1420 c         1299 g         1860 t
ORIGIN      
        1 aatttgtata agaatgaaat aattctttag ctagttttag atcatatata ctttcttgag
       61 agtggatttt gtcctttaaa tcctcttcaa attttctgta ttctttataa gcgttaatta
      121 aatttttctc aatagaaatt ggagatggat tcttcacaag aactttatct cccttacctt
      181 gattttcttt tctatttaaa gatcttttta gtctttgcca atattgacag ttttttccac
      241 atatagggca cgcagagtca tttagaaaag agtttactgc atcgtttaat gatagtgatt
      301 taatttcggg gcctgcatcg agttcagtga tattaatttc attaagtgtt gtactcataa
      361 taaatttttc cttgttttaa gagtttataa attatttcgc ttgttttctt gccactgctc
      421 ggtagccaat atctcggcga tagaatttgc cttgccattg aatttgttcg gcaagttgta
      481 aggcttgttg ttgagcttca aatacactgt tgccaagtgc ggtggcacaa agtacacgtc
      541 caccgttggt gagcagtttt ccttcttttt gctcaacccc tgctaagaaa actttttgat
      601 tggaggtaga ggtcggaatg cctatgattt catcgccttt acggtaatcg cccgggtagc
      661 ctgcggcagc taaaacaatg cctaatgcgg cttgttcaca ccattttgat tgcacgctat
      721 ccaatttgcc ttcgcacgct tttaagcaca attcaacgag gtctgattcc aaacgcatca
      781 taatcggctg agtttcaggg tctccaaaac ggcagttaaa ttcaatcact ttcggctgac
      841 cgtttggcat aatcattaag ccggcataga gaaaaccggt gtaaggggta ttttcgcttg
      901 ccattccttg cacggtcggg taaataattt cgtccattac acgttggtgg attgcctttg
      961 ttaccaccgg agcaggggag taagccccca ttccgccggt atttaagccg ctatcgccct
     1021 cgccaacacg tttgtggtct tgtgaggttg ccattggttc gacatttttg ccgtccacca
     1081 tcacaataaa actggcctct tctccgtcta aaaattcctc gatcaccaca cggctgccgg
     1141 cttcaccaaa ggcgttgcct gacagcatat cacgcactgc atcttccgcc tcttgtaaag
     1201 tcattgcaac aattacgcct ttgcctgcgg ctaaaccgtc tgctttgatt acaatcggtg
     1261 cacctttttg ttttaagtag gcaagtgccg gttcaatttc ggtgaaattt tggtattctg
     1321 cggttggaat ctgatggcga gccaagaaat ctttggtaaa tgctttagaa ccttctaatt
     1381 gagcagcggc ttgggtcggg ccgaaaatgg ttaaaccgtg ggctcgaaaa gcatcaacca
     1441 cgccaactac taacggtgct tcagggccga caatcgtcaa acctacgcta ttttgtttag
     1501 cgaatgtaac taaggcaggc acgtcagtgg cggaaatagc tacattttca atgccgtttt
     1561 ccatcgctgt gccggcattg ccgggggcga caaagacttt gtctgcgagc ggcgattgac
     1621 gaactttcca agcaagagcg tgttcacgcc caccgttgcc gataattaaa atattcattg
     1681 ggattccttg caaaaatgat aaagcaaacg tttgcgtatt gtacttgatt tgtttatctg
     1741 ctgacaagca gtcgtttttc tcggattttt tgcaaaatac gaaattgttg cttgcaaaat
     1801 aggctttttt cagtataatc ctgccgttca gtcacattcg ttttttaatc cttgcttcca
     1861 caagttggtg actggctaaa gttggaggct gctaacccgt aaggatagtc aatgcgtcac
     1921 tacgaaatcg tttttatggt tcacccggac caaagcgaac aagtaccagc aatgattgag
     1981 cgctacacag cgtctgtaaa agaagctggc ggtcaagttc atcgcttaga agattggggt
     2041 cgtcgtcaat tagcataccc aatcaacaaa cttcacaaag cacactatgt gttaatgaat
     2101 gtagaagcac ctcaaagtgt aatcgacgag ttagaaacta acttccgtta taacgatgca
     2161 gttcttcgta acttaatcgt tcacactaaa gcggcagtaa ctgaagcgtc accaatggtg
     2221 aaagcgaaag aaagcaaagt tgctgaagcg gtagctgaag ttgaatcaga ggaagcaggc
     2281 gagtaatttg ccgattgata attgtttaat cttaagcgga acggtttcca gcttggttaa
     2341 acaaagccta aacccccttg gtgtgcctca ttacagtttt tggttagaac atcgttcaat
     2401 ccaaaccgaa gtgaatttag aacgccaagc gtggtgcaaa atccaagtgg ttttggcagg
     2461 caatcaattt agttatttaa cccaacaaat taagctcggt gagagcgtga gaattaaagg
     2521 ttttatccat actcacaaag actttaacgg tttaaatcag ttagtcttac acaccgaaca
     2581 aattgaattt atagatcagg agaagccaaa tggcacgtta tttccgtcgt cgtaagttct
     2641 gccgtttcac agcggaaaat gttgttgaaa tcgattacaa agatatcgct acattaaaga
     2701 actacatttc tgaaagcggc aagattgttc ctagccgtat tactggtact cgtgcgaagt
     2761 atcaacgtca attagctcgt gcaattaaac gcgctcgcta ccttgcgtta cttccatata
     2821 ctgataacca ccaataatca ggagagagta caatgcaagt tattttatta gacaaagttg
     2881 ctcacttagg ttctgtgggc gaccaagtaa ccgttaaatc tggttttgct cgtaacttct
     2941 taatcccaca aggtaaagcg gttatggcaa ctgcggcaaa cattgctcac tttgaagcac
     3001 gtcgtgcaga attagaagca aaagctgcag cagcattagc aactgcacaa gaacgtgcag
     3061 cgaaaattgc agcattagca gcagtatcag tatctgcaac tgcaggtgat gatggtcgtt
     3121 tattcggttc tgtatcagct aaagacatcg ctgaagcatt aactgcagca ggtgttggag
     3181 ttgctaaatc tgaagttcgt ttaggtgaag gtccacttcg tacaaccggc gaacaccaag
     3241 ttaaaattca cttacaccct gaagtgaatg caactgtagc agtaaacgtt gttgctgaat
     3301 aatcagtaga aatagaaaac ccagcgaaag ctgggttttt tgtttgcttt atttattggt
     3361 tagaatcagt gagatatttc tgctgtgtcg gttaatgctt ttgtccatag gcaatttcct
     3421 ttggattttt tctcaatcag tttcagaagt gctaaatgcg actcttcctc ttcatcgttt
     3481 gctttaagaa taattgcctc atcggcattt aacacaattg cagaaaattc ttcttcaata
     3541 tcaataactt cacttaccac ttcagtttct tcttcgccta ataatgaaat ctgaccgccg
     3601 gtcatcatta ggaatacatc agctaagatc tccgcatcca gtaacgcccc gtgtagtaca
     3661 cgcttgctat tatcaatgcc gagcctgtcg caaagtgcat ctaaattatt ccgtttgccg
     3721 gggtacattc ttcgtgccat ttgcaggcta tcggttacgg tacacatttc tgcggttttt
     3781 gccggtggat taggcagata agaaaattct tgatccataa acgccacatc gaagggggca
     3841 ttgtgaataa ttaattccgc acctttgatg aaatccaaaa actcctcggc aatttcagca
     3901 aaaacaggtt tatcttgcaa aaattcattg gtgatgccgt gaactgcaat cgcctcttca
     3961 tctacctcac gcggtggctt gatataaacg tgataagttc tgccggttaa acggcggtta
     4021 atgacttcaa ccgcaccgat ctcaataata ttatgcccaa tctgtggcgg gccacctgcc
     4081 atattcattc ctgtggtttc agtatccagc actacttggc ggataatttt ttcttctgtc
     4141 atattcaatt taaaattgta ggggtgaaat atttttatcc cttaattctg catttgatta
     4201 ggggcgaaac atatttcgcc cctacattgt tacttcgcaa tccgtttata tttcactcgg
     4261 tgcggttggg tggcggcttc accgaaggtt ttcttcttcc actcttcata gtcggagaag
     4321 ttaccctcgt agaacgtcac tttgccttca tcgccgtagt ctaaaatatg ggtggcgata
     4381 cggtctaaga accagcggtc gtgcgaaatt accattgcac agcccgggaa ctctaagatc
     4441 gcattttcca acgcacgcag ggtttctacg tctaagtcgt tggtcggctc gtccagtaac
     4501 aacacgttac cgccacgttg tagtagcttc gccaagtgta aacgaccacg ttcaccgcct
     4561 gaaagctcgc ccacacgttt ttgctgatct acgcctttga agttgaaacg ccccacataa
     4621 gcacggcttg ggatttcaaa gttaccaatc gtgagaatat cctgcccgtt cgacacctct
     4681 tcccacacgg ttttcttatc gtccatcgca tcacggaact gatcgaccga tgccattacc
     4741 accgtttcac caagcacgat tgaaccagaa tccggctgtt ctttaccaga aagcatacgg
     4801 aacaaggttg atttacccgc accatttgcc ccgataatcc cgacaatcgc ccccttcgga
     4861 atagcgaacg acaagtcgtc aatcaaagtg cgatcgccgt aagatttagt caggttttgt
     4921 acctcgatca ctttatcacc taagcgtgga cccggtggaa taaagagttc gttagtctcg
     4981 ttacgttttt gatattcgcc tgagttaagc tcttcaaagc gtgccatacg agccttactt
     5041 ttcgcttggc gaccttttgg attttggcgt acccattcca actctttctc aatcgatttt
     5101 tgacgagccg attccgccgc ttgctcttgt gccaagcgtt tttctttctg ctccaaccaa
     5161 gaagagtagt taccttccca aggaatgcct tcaccacggt caagctctaa gatccagccc
     5221 gcaacgttgt ctaagaagta acggtcgtgg gtaattgcca ctacggtgcc ttcgtagtcg
     5281 tggaggaaac gctccaacca cgccaccgat tccgcatcta agtggttggt cggctcatct
     5341 aacaataaca tatccggttt ttccagcaac agacggcaaa gtgccacacg gcggcgttca
     5401 ccccctgata aatgctcgat ttttgcgtcc caatccggca gacgtaacgc atcggcagca
     5461 cgctctaact ggttttgaag gttatggcca tcgtgggctt gaataatcgc ctctaattcc
     5521 gcctgttttg ccgctaattt gtcgaaatcg gcattctcat cagcatacat cgcatagact
     5581 tcatcaagct gggttaaggc gtttttcact tccgcaaccg cttcttccac cgcttcacgc
     5641 acggtttgct gtggggcaag tttcggttct tgtggaagat agccgatttt aattcccggt
     5701 tgtggacgag cctcgccctc gaactcttta tctacgcccg ccataatgcg taaaagcgtt
     5761 gatttacccg ccccgtttaa gccgagcacc ccgattttcg cccccgggaa aaagctcagg
     5821 gaaatatctt taagaatgtg acgcttcggc ggcacgactt tgccgacacg gtgcatcgta
     5881 tatacaaatt gagttgacat tggttgtatt cctcacaaaa aaattcgcct tattttactt
     5941 gaatttacag ccaaaatata gggtggtttt ggcttttggt aaagtaacct tttccaatag
     6001 agatgttatt tgaggctgca tagtactatg catttctctt accttgacag gtaagagaaa
     6061 caaatcctga aggaaaaaaa ttttaaggaa gttattctat gcaatatgta tgtccaaaaa
     6121 cactcaaatt attcaacagc attgttggtt gttataaggg agaagattaa ttctctacct
     6181 catcaaggct tgattttaga tttaatatcc atttctaaag at
//
LOCUS       DANLZQ010000132         6085 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.132, whole genome shotgun sequence.
ACCESSION   DANLZQ010000132 DANLZQ010000000
VERSION     DANLZQ010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6085)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6085)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6085
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.132"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(<1..633)
                     /locus_tag="PXE50_002378"
     CDS             complement(<1..633)
                     /locus_tag="PXE50_002378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF968 domain-containing protein"
                     /protein_id="HDL5623233.1"
                     /translation="MAEGLLLTPYFQTEVGIVFYKVPKDVSPAAFGERTLLQPAPTDL
                     ATVKSGKVANFSANSTACKELAVFAKSAKVRSTLNQRDKYSNDLPYIRFVKSIQTCQC
                     RDGKYCHTEKVLVENKNGAVQLCWHHDKMRMDGEIPNEKLEALADENWEKFIAQQIRL
                     TLRKTQSTAIEFADLVLFASIKGLLDELDSKALQQFLGYPPLNNSGVSKES"
     gene            complement(760..1353)
                     /locus_tag="PXE50_002379"
     CDS             complement(760..1353)
                     /locus_tag="PXE50_002379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine methyltransferase"
                     /protein_id="HDL5623234.1"
                     /translation="MTDFDKNTYQTPNYVRNWLNHRYAWFHIDGCSNGQNTLYTYWIG
                     RAADGLDDDKLSCQIADDFLADDLFDVLLDKVSDWGELLRIFVNPPYSDPLPFVQRAA
                     ELKKAGHLVVMLLPADKTTEWYTIIQQHANEVIDIIGYHDEKGTWRTGRIQFINPVTG
                     KPAQGNNKGSMIVVFDPFIEGIVTRQMPLDKIKEWGK"
     gene            complement(1364..2410)
                     /locus_tag="PXE50_002380"
     CDS             complement(1364..2410)
                     /locus_tag="PXE50_002380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conserved phage C-terminal domain-containing
                     protein"
                     /protein_id="HDL5623235.1"
                     /translation="MRFTSTINNVRLVEWEINITQGALVDLINQASSWAKAVVIDGIT
                     YYWMSFSKVCEELPAVFSKEDTVYRQYKVLKEKGIIDHFKMDGKDYVRLTEKGCEWNK
                     FEPIRESEKNPSIGNNSEQTRKNFRESSEKNPTDNNTNYKNNNDHTTPLNPPAGEPAP
                     AEVVLNYLNSALVTLAVQLGERKPVGYSLKPWAKNITARIRESSVADCCQVVDYLVAK
                     WGRDEKMREYLCPKTIFRQSNFADYFPKSTAWANNGKPVCVNGKWVTPAELEKRLIMP
                     TVDEVRALFQKSLSGNPFKALDFTNKRNLVMYHATINTRNKRPLERDLPMIISQEIKN
                     AVERIDRLRVPTFS"
     gene            complement(2407..3090)
                     /locus_tag="PXE50_002381"
     CDS             complement(2407..3090)
                     /locus_tag="PXE50_002381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage regulatory protein/antirepressor Ant"
                     /protein_id="HDL5623236.1"
                     /translation="MNQLLNISAPKASITMSSREIAELCEKEHRHVTRDIEAMFSQLD
                     IPAEGYAHFWTHPQNGQTYREFRLPYDLTLTLISGYSVILRKKIIDRWQELESRQGIP
                     QSFSQALRLAAEQQEVIEQQNHQLAIQAPKVAFVEHYVEVGTTKSLRETAKILNFPEK
                     RLIECLERYRVLYRQSGNLLPYQDKQAKQLFAVKTGTAEHGHNFTQTRVTAKGIEWIA
                     QRYASELGQ"
     gene            complement(3148..3336)
                     /locus_tag="PXE50_002382"
     CDS             complement(3148..3336)
                     /locus_tag="PXE50_002382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cro/Cl family transcriptional regulator"
                     /protein_id="HDL5623237.1"
                     /translation="MKKDDVLEHFGTLEKVAATLGISVSAVSQWGEIIPEKNAYRLQE
                     ITAGKLKVKHSLYRNRSK"
     gene            3461..4117
                     /locus_tag="PXE50_002383"
     CDS             3461..4117
                     /locus_tag="PXE50_002383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5623238.1"
                     /translation="MNTQTLGDRIKSRRKELKLTQKDLATALKGVSHVAVSQWESSTT
                     KPNSENILDLSTVLQCDISWLLRGNGESNVLPASLGMTKVPLISYIQAGQWTGIDDFR
                     ETCGDYEYILTDLEVSEDAFALEIKGDSMEPDFIEGDRVIIDPDVQPHAGEFVAAING
                     DYEATFKKYRPLEDLDEYGRQHFELIALNPDYHKLSTLKQEIRIIGTMVEHRIYRRKR
                     "
     gene            4129..4503
                     /locus_tag="PXE50_002384"
     CDS             4129..4503
                     /locus_tag="PXE50_002384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623239.1"
                     /translation="MTEFKDVKQAIVEAQLASTPKDKVVNDIMKGSAELLSANDIINR
                     LGIGADEFQELVNLPNHYLRINGGLGAAVYNTRRMFDTHVELVNQELEKNISFPKPDL
                     YILGKARWKKETFKKWLEEQCR"
     gene            4655..5392
                     /locus_tag="PXE50_002385"
     CDS             4655..5392
                     /locus_tag="PXE50_002385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HDL5623240.1"
                     /translation="MLSKQVLSISESRLSTYLFCFFRNDPTKQKEAIAIYTALQHRTG
                     IYFSLIQEIEVALRNEVSQLLRFAAPNHNLYEFFHFLANDSNAPLNAESKRQLQKAIS
                     ECGRNYNENDIISHISFGFWVNLFNYDIKRNQYVAYWQSVLKPIFGHRFSNFKDLYNT
                     LKQIMRFRNRLYHQEVVWNKRIAKKPTHALENLEKTYKQFELALQKIAPERFAFRQLS
                     QALIWQRQIFFDQQIFEAEIVILPQHI"
     gene            complement(5428..6024)
                     /locus_tag="PXE50_002386"
     CDS             complement(5428..6024)
                     /locus_tag="PXE50_002386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623241.1"
                     /translation="MKKLLMTLCCLPAFALANETGESCSKIEDSAKRLECYDSVFVKK
                     DTGKDEATDEKSNWEYEQKKDELRNATTYFAKIRSTNTIDFGFPYNSSSMNLMLRKDP
                     KYGNDVIFSVHGQFNGCMIESCKITVKFDDGKLESYRMIGADGGSNDTLFIENAKAMK
                     TFVDKLKKSKKLIVEASFYNYGKGQFTFDTQGLEWKHF"
BASE COUNT         1792 a         1243 c         1120 g         1930 t
ORIGIN      
        1 actttctttg ctcacaccgc tattattcag tggtggatag ccgagaaact gctgtaatgc
       61 cttgctgtct aattcatcaa gcaaaccttt gatactcgca aacaacacta agtccgcaaa
      121 ttcaatagcg gtagattgcg ttttgcgtaa ggttaagcgg atttgttggg cgataaattt
      181 ttcccagttt tcatccgcta gtgcttctaa tttttcattc gggatttcac cgtccattcg
      241 cattttgtcg tgatgccaac aaagctgtac cgcaccgttt ttattctcta ccagcacttt
      301 ttccgtgtgg caatatttgc catctcggca ttggcacgtc tgaattgact ttacaaaccg
      361 gatataaggc aaatcattac tatatttgtc acgctgattt agcgttgaac gaacttttgc
      421 cgatttagca aacaccgcca gctctttaca agcggtcgaa tttgccgaaa aatttgcaac
      481 cttgcctgat ttaaccgtcg ctaaatcggt cggtgcaggt tgcaacaaag ttcgctcacc
      541 gaaagcagca ggagaaacat ctttaggcac tttgtaaaac acaataccca cttcggtttg
      601 aaagtaaggg gtaagtagca aaccttccgc cattattgcc cccatttctc ggtttcatca
      661 taggctttca cgaatagcat aaatacgcca atacagatta aaaaaatcag tacgccaatt
      721 actgcaccaa taccaataaa tagttcccaa taatccattt tatttacccc attccttgat
      781 tttatctagt ggcatctgac gagttacaat gccctcaata aatgggtcaa acacaacaat
      841 catcgagcct ttattattac cttgtgccgg tttacctgtt accgggttga taaattgaat
      901 ccgccctgtc cgccaagtgc ctttttcatc gtgatagcca ataatatcaa ttacctcatt
      961 agcgtgttgt tgaatgatgg tgtaccattc tgttgtttta tccgctggta ataacatcac
     1021 aaccaaatga cctgcttttt tcaattctgc cgctcgttga acaaaaggca gtggatcaga
     1081 atatggcgga ttaacgaaaa tacgcagtaa ttctccccag tctgaaactt tatctagtag
     1141 cacatcaaat aaatcatcgg ctaaaaaatc atcggcaatt tggcaactta atttatcatc
     1201 atctaaaccg tctgccgctc taccaatcca ataggtgtac aacgtatttt gtccgttaga
     1261 gcaaccgtca atatgaaacc aagcataacg atgatttagc caattacgca cataattagg
     1321 tgtttggtaa gtgtttttat caaaatctgt cattgtctaa tccttacgaa aatgttggta
     1381 ctctcaaacg gtcgatacgc tcaaccgcat ttttaatttc ttggctgata atcatcggca
     1441 aatcacgttc aagtggtcgc ttgtttctgg tgttgattgt ggcgtggtac atcactaaat
     1501 ttcgtttgtt ggtaaagtcc aatgccttaa acggattgcc actgagtgat ttctggaaca
     1561 aggctcgtac ttcgtccacc gttggcataa tcaagcgttt ttccagctcc gccggtgtaa
     1621 cccacttacc atttacgcaa acaggctttc cgttattagc ccaagcggtc gattttggaa
     1681 aataatctgc aaaattcgat tggcggaaaa tcgttttcgg gcagaggtat tcacgcattt
     1741 tttcatctcg tccccattta gcgacaaggt aatccaccac ttggcaacag tccgccaccg
     1801 aactttcacg aatgcgagca gtaatatttt ttgcccacgg cttgagcgaa taccccacag
     1861 gcttacgctc accaagctgt accgccaacg ttaccaaagc cgaattgaga taattcaaca
     1921 caacttcagc cggggcaggt tcccccgctg ggggattaag gggggtagta tgatcattat
     1981 tatttttata attagtatta ttatctgtcg gatttttttc cgagctttct cggaaatttt
     2041 tccgagtttg ttcggagtta tttccgatac tcggattttt ttccgactca cggatcggct
     2101 cgaatttatt ccattcacaa cctttttcgg ttaaacggac ataatcttta ccgtccattt
     2161 tgaagtggtc gataatgcct ttttctttca acaccttata ttggcggtaa actgtatctt
     2221 ctttgctaaa aaccgcaggt aactcttcgc aaaccttgct aaatgacatc cagtaatagg
     2281 ttatgccgtc aataaccacc gctttcgccc aactggaggc ttgattgatt aaatcgacca
     2341 atgccccttg tgtaatattg atttcccatt ccactaagcg gacattgttt atggttgatg
     2401 taaatctcat tgtcctaact ccgatgcgta acgttgagca atccattcaa tccctttggc
     2461 ggttactctc gtttgggtaa aattatgacc gtgttctgcc gtgccggttt ttactgcaaa
     2521 aagctgttta gcttgtttat cttgataagg gagtaggttt cctgattggc gataaagaac
     2581 tcgatatcgt tctaaacatt caatcaaccg cttttctgga aaattgagta tcttggcggt
     2641 ttctcgcaat gatttagtcg ttcccacctc aacataatgc tccacaaatg cgactttcgg
     2701 ggcttgaatg gctaattgat gattctgctg ctcaatcact tcttgctgtt ctgccgccaa
     2761 ccgtagagct tgagagaaag attgtggaat accttgtctg ctttctagct cttgccaacg
     2821 gtcgataatt ttcttgcgaa gtatcacgct atagccggaa attagggtaa gggttaaatc
     2881 gtaaggcaat cgaaattccc ggtatgtttg cccattttga gggtgtgtcc aaaaatgggc
     2941 atacccctcg gcaggaatat ctaattgact aaacatcgct tctatatcac gagtaacgtg
     3001 tcgatgttct ttttcgcaca actcagcaat ctcacgacta ctcatcgtaa tgcttgcttt
     3061 tggtgccgaa atgtttaata attgattcat cgaaaatacc tttcgtgttt aattatgtat
     3121 gaaagccacc gttacagcgg tggtttttta tttgcttcta tttctataaa gtgagtgttt
     3181 gacctttaac ttgccggcag tgatctcttg taatctgtac gcatttttct caggaataat
     3241 ctcgccccat tgagaaacag cagatacact aatccctaaa gttgccgcca ctttttctag
     3301 agttccgaaa tgttcgagca catcatcttt tttcatattt tcttaattcc tttcttgaat
     3361 tttatttaag acctcttaaa tatacaatta aaggaaactt aagtcaataa atgttaagat
     3421 aacttaacag caactttatt tttaccttta aggggatact atgaatactc agaccttggg
     3481 cgatagaatt aaaagccgta gaaaagaatt aaaattgaca cagaaagatc ttgctactgc
     3541 gttaaaaggg gtctcacacg ttgcagtatc tcaatgggaa agtagtacga ctaagccaaa
     3601 ttcagagaat attttggatt tatctacagt attgcaatgc gatattagtt ggctcttgcg
     3661 tggtaatgga gagtctaatg ttctacctgc tagcctcggt atgactaaag tcccattaat
     3721 tagctatatt caagccggac aatggacggg aattgacgat tttcgtgaaa cctgtgggga
     3781 ttatgaatat atcctaactg atcttgaggt gtctgaagat gcttttgccc tagaaatcaa
     3841 aggggactcg atggagcctg attttattga aggagaccga gtaattattg atcctgatgt
     3901 acaacctcac gccggtgagt ttgtggcagc aattaatggc gattatgaag ccactttcaa
     3961 aaaataccgt ccgttagaag acttagacga atacggaaga caacattttg agcttatcgc
     4021 tcttaatccg gattaccata aattatcaac gctaaagcaa gaaatcagaa ttatcggcac
     4081 aatggtagag catcgtattt atcgtagaaa gagataggaa ttgataatat gacagaattt
     4141 aaagatgtaa aacaggcgat tgtagaagct caattagctt cgacacctaa agataaagtc
     4201 gttaatgaca taatgaaagg aagtgcggaa ctgctttcag caaatgatat tatcaatagg
     4261 ttaggtattg gggcagatga gtttcaagag ttggttaatt tacctaacca ttatttgcgt
     4321 ataaatggag ggttaggtgc tgctgtgtat aatacaagaa gaatgtttga tacccatgtt
     4381 gagttagtca atcaagagtt agaaaagaat atttcatttc ctaaacctga tttatatatt
     4441 ttggggaaag ctcgttggaa aaaagaaaca tttaagaaat ggttggaaga acagtgtaga
     4501 taaagaaaag gtaggttaaa aaacctacct tttctgaacc gcaaataagc gattctcaca
     4561 ctttacaaag caatccagct cctacgtctg gggcttcggg tccgttgcca gtgcaagtat
     4621 tattacatta aactaaactt gagtaaagga aaatatgttg tccaaacaag tgctaagtat
     4681 ttcagaaagt cggctgagta catatttatt ttgctttttc cgaaatgatc ccacaaaaca
     4741 gaaagaagct attgcaattt ataccgcctt gcaacatcga acaggaattt atttttcatt
     4801 gattcaagaa atagaggtgg cactaagaaa tgaagtcagc cagttgttac gctttgctgc
     4861 acctaatcat aatttatacg aattctttca ttttctagcg aacgatagta atgctcctct
     4921 taatgcagaa tctaaacgcc agctacaaaa agccattagt gaatgcggac gtaactataa
     4981 tgaaaatgac ataatttctc atatttcttt tggattttgg gtaaatctgt ttaattatga
     5041 tataaagcgt aatcaatatg ttgcttactg gcaaagcgta ttaaagccta tttttggaca
     5101 tagatttagt aattttaagg atttatacaa tacattaaag caaattatgc gttttagaaa
     5161 tcggctgtat catcaagaag tggtttggaa taagcgaatt gccaagaaac caacgcacgc
     5221 actagagaat ttagaaaaaa cttacaagca atttgagtta gcactacaaa agatagcacc
     5281 tgaacgattt gcgtttcgtc agctttcaca agcacttatt tggcaacgcc aaatcttttt
     5341 cgaccaacaa atttttgaag ctgaaatcgt tattttgccc caacatatct aagcaaaaag
     5401 ctacgcatct atgtagcttt ttcttaatta aaaatgtttc cactctaacc cttgtgtatc
     5461 aaaggtaaat tgccctttgc cataattgta aaaactcgcc tctacaatta gttttttcga
     5521 ctttttcaac ttatctacaa aggttttcat tgcttttgca ttttcaatga aaagcgtatc
     5581 attgctgcca ccatccgccc caatcattcg ataactttcc aatttaccat catcaaactt
     5641 cacagtaatt ttacagctct caatcataca gccattaaat tgaccgtgta cgctaaaaat
     5701 tacatcattg ccatatttag ggtctttgcg taacattaaa ttcattgatg atgaattata
     5761 cgggaaacca aaatctattg tgttagttga tctaatttta gcaaagtaag tcgttgcatt
     5821 acgcaattca tctttctttt gttcatattc ccaattagac ttttcatcgg tagcttcatc
     5881 tttaccagta tcttttttca caaagacact atcataacat tctaagcgtt ttgcactatc
     5941 ttcaatctta gagcaacttt ctccagtttc gttagctaaa gcaaaagcgg gcaaacaaca
     6001 taaagtcatc agtagttttt tcatataacc tccatagaaa tcccttctta ttttctcaaa
     6061 agcgtggttt tcggtctgtg atcaa
//
LOCUS       DANLZQ010000133         5811 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.133, whole genome shotgun sequence.
ACCESSION   DANLZQ010000133 DANLZQ010000000
VERSION     DANLZQ010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5811)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5811)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5811
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.133"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(<1..501)
                     /locus_tag="PXE50_002387"
     CDS             complement(<1..501)
                     /locus_tag="PXE50_002387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623242.1"
                     /translation="MKQNRKKSKKVIGTHKKENGLKQFIKNNKIPIILISAIWSIFTT
                     DILERIANMPIIWKNFEENYLYNKKLDGLWSTNTNYIIDYKLLNIPEEQPNVIIEFMV
                     NKDDNSILGEMTSTALCELIPLTWSFRLESPKPTLLNLIFDRELKLSYLVSGGYTELS
                     TFKIKEI"
     gene            complement(746..1339)
                     /locus_tag="PXE50_002388"
     CDS             complement(746..1339)
                     /locus_tag="PXE50_002388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623243.1"
                     /translation="MHNNLAIFYCGTNGAGKSTLRSFNQDKVEIVIDSDNIAMQINPL
                     NPRLADIEAGRKAIELFQFAVKNQVAFSMESTLSGKSILKRMENAKAGYFKTRLNYIG
                     VDSYKINIARVKARVKAGGHFIDEETIRKRYHISRENLIEAIFINDETLIYDNSETKP
                     NLILQIADKKVIKISDKIPNWCNQLCDELVELGFKTT"
     gene            complement(1329..1499)
                     /locus_tag="PXE50_002389"
     CDS             complement(1329..1499)
                     /locus_tag="PXE50_002389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623244.1"
                     /translation="MTSREELLKKQRELDILFTAWFEEKKKHEVLTYRRENGDLIQHY
                     PDGTEKVIEYAQ"
     gene            complement(1501..2243)
                     /locus_tag="PXE50_002390"
                     /pseudo
     CDS             complement(1501..2243)
                     /locus_tag="PXE50_002390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250915.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
     gene            complement(2240..2683)
                     /locus_tag="PXE50_002391"
     CDS             complement(2240..2683)
                     /locus_tag="PXE50_002391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDL5623245.1"
                     /translation="MLKNLSWRAKRFDELSTQELFEIYHARTAVFVVEQNCPYQEVDN
                     KDLQAVHFFTKNAKNLTAYCRLIPANDGVHIGRVLVVKENRGSGLARELVQKAMDYCG
                     EHFPAQPIHAQAQSYLQGFYESFGFKAVSEVYLEDGIAHLDMVLE"
     gene            complement(2677..3114)
                     /locus_tag="PXE50_002392"
     CDS             complement(2677..3114)
                     /locus_tag="PXE50_002392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HDL5623246.1"
                     /translation="MKQVQFYLLSQADAAELSAAEMQACELAAQAWRLGKRVLIACET
                     EQQALNIDEALWARDPDSFVPHNLSGEITTYPTPIEISWKGKRNAQRRDLLISLQTQL
                     PEFIGSFTQIIDFVPVEETAKAQARDRYKQYRQLGWQLETIQC"
     gene            3353..3796
                     /gene="lysM"
                     /locus_tag="PXE50_002393"
     CDS             3353..3796
                     /gene="lysM"
                     /locus_tag="PXE50_002393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein LysM"
                     /protein_id="HDL5623247.1"
                     /translation="MGLFDFVGDIGRKLFNKEEDASKAVTEHLAEDNPGVENVNVTVE
                     NGVAKISGIASTAAAVEKAVLMAGNVAGITEVNIDEVTLPDDVQLASDDELYVIQKGD
                     TLWEIATKAYGNGAKYKAIVEANKEVIKDENKIFPGQKIRIPKGL"
     gene            complement(3850..4701)
                     /locus_tag="PXE50_002394"
     CDS             complement(3850..4701)
                     /locus_tag="PXE50_002394"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005701564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HDL5623248.1"
                     /translation="MKQYLDLCNRIVSEGKWVANERTGKHCLTVINADLTYDVEKGEF
                     PLVTTRRSYWKAAIAELLGYIRGYSNAADFRQLGTKSWDANANENAQWLANPYRKGED
                     DMGLVYGAVGRNFPKPDGGSVDLLRQIVDDLKKGIDNRGEIYTFYHPGAFHMGCLRPC
                     LHSHHFSLLDGTLYLNSTQRSADVPLGLNWNMIQCYTFLALMAQITGHKAGQAFHKIV
                     NAHIYEDQLELMRDVQLKREPLNAPKLIINPDIKSLEDLETWVSLDDFKVEGYEYHPA
                     IQYPFSV"
     gene            4794..5345
                     /locus_tag="PXE50_002395"
     CDS             4794..5345
                     /locus_tag="PXE50_002395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623249.1"
                     /translation="MKGIMKSILVFSTAVFLAACSSNKSGWTRLNDNDVDQKSYAIAY
                     GATAQTYADRVNESYDINSFMNGVNDWYTKKVTLPIEQIRAITINRMLDHNVYAYYSG
                     VIYAADLQANFNHLDPNCWGLVQPASMTQGIHDAMLDLQKNKVRGDEYIKNGVEQILH
                     LCVKTIAEDENESQSKGKTKKHK"
     gene            5554..5648
                     /locus_tag="PXE50_002396"
     tRNA            5554..5648
                     /locus_tag="PXE50_002396"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5589..5591,aa:Ser,seq:gct)
     gene            5662..5738
                     /locus_tag="PXE50_002397"
     tRNA            5662..5738
                     /locus_tag="PXE50_002397"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5696..5698,aa:Arg,seq:acg)
BASE COUNT         1716 a         1100 c         1117 g         1878 t
ORIGIN      
        1 aatttcttta attttaaatg ttgatagctc ggtatatccc ccactaacaa gataactcaa
       61 tttcaactct ctatcgaaaa taagatttaa taatgttggc ttagggcttt ccaatctaaa
      121 actccaagtt agaggtatta actcacacag agctgttgaa gtcatttccc ctaaaatcga
      181 attgtcatct ttattaacca taaattcaat gataacattt ggttgctctt caggtatgtt
      241 caataattta tagtcgataa tgtaatttgt atttgtagac cataaaccat ccagtttttt
      301 attatatagg taattctcct cgaaattttt ccaaataata ggcatgtttg cgatgcgttc
      361 taaaatatca gttgtgaaga tactccatat ggcagatata agaataatag gaattttgtt
      421 attttttatg aactgtttta agccattctc ttttttatga gtaccaataa cttttttaga
      481 ctttttccta ttctgtttca tctttgtgtt tttgttccaa tatccccgat ggtgatcgtc
      541 ttcgacgaga gcttatttat ttaagaacct atcagagata ggcataagcg gtctgtttcg
      601 agaagttttt tgcaaagttt ttctttaatc cgacagcttg tcacccacac acaagccgtg
      661 tggggttacg catagctgag ccactttgtg gctctaagtt acagctccaa aggagctggg
      721 attgtcgagc ctagcacggc tcgtgctagg tggttttaaa ccctaattcc actaattcat
      781 cacaaagctg attacaccaa ttcggtattt tgtctgaaat ttttatcact ttcttatcag
      841 caatctgcaa aatcaaattc ggcttggttt ctgaattatc ataaatcagt gtttcatcat
      901 tgataaaaat cgcttcaatt aaattttcac ggctaatgtg atagcgtttt ctaatggttt
      961 cttcatcaat aaaatgtccg ccggctttca ctcttgcttt tacccgtgcg atgttaattt
     1021 tatagctatc gacaccaata taatttaatc gagttttgaa atatcctgct ttggcatttt
     1081 ccattcgttt tagaatagat ttacccgaga gggttgattc cattgaaaat gcaacctgat
     1141 tttttactgc aaactgaaat agttcgattg cttttctgcc cgcctcaata tcggccaatc
     1201 ttggattgag tgggttaatc tgcatcgcaa tattatcgga atcaatcaca atctcgactt
     1261 tatcttgatt gaaagaacgt aaagtagatt tgccggctcc gtttgtgcca cagtaaaaaa
     1321 ttgctaggtt attgtgcata ttcaatcact ttttccgtac cgtccggata atgctgaatt
     1381 aaatccccat tttctcggcg atacgtcagc acttcgtgct ttttcttttc ttcaaaccat
     1441 gctgtaaaga gaatatccag ttcacgttgt tttttcagta attcttcacg acttgtcatt
     1501 ttatgtcctc tgtttcagaa tcgccaaata cctttccaac tcagctaatt catactgact
     1561 aatcaattca accaaactac taatatcttg ttgattttta tggaaatcat caaaacattg
     1621 gtaatattgg gctcgattgg taaatttaat atcaatcggt aaatagccct gttttaataa
     1681 ttcaaaatta atcagtaatc gccctgtgag cccgtttcca tcaataaaag ggtgaatgct
     1741 ttcaaaggct aaatgcagcc aactgattgc ctctatggga tgaagtgcgg tcagtttttg
     1801 ttgatatttt tcaatcaata attgcatttc ttcggcaatt aaataagggg gggggcattt
     1861 tctgccccta aaattcgtac tggaattttg cgataaaccc ctcggctttc cgcattgccc
     1921 attaatacca gagaatgaat atctttaatc gctcgttcgc ttaatggttc tttattggcg
     1981 actaattcat aaatatagtt gaatgcatcc ttaaaaccga taatatctaa atgctcccga
     2041 atcggttttt cggcaatggt cattccctct tttaaaatga gcaccgtttc acgcaaagta
     2101 atggtattgc cttcaattgc attggaatta tagctgcttt caataataaa ctcttcccgc
     2161 agtcgttgaa cttcgctttc agataatgga cggcgttgtg aaagtgctgt ttttaattgt
     2221 tcgattttag ctaatttatt cattctaaca ccatatccaa atgcgcaatc ccatcttcca
     2281 aatacacttc tgaaaccgct ttaaacccaa aactttcata aaacccttgc aggtaacttt
     2341 gggcttgggc gtgaatgggt tgagcaggaa aatgttcgcc acaataatcc atcgcttttt
     2401 gtaccaattc ccttgctaag cctgagccac gattttcttt caccaccaac actctaccta
     2461 tatgcacacc atcattggct ggaattaaac ggcagtaagc ggtcagattt tttgcatttt
     2521 ttgtaaagaa atgcaccgct tgcaggtctt tattatcgac ttcttggtaa gggcagtttt
     2581 gctcaaccac aaacaccgct gtacgtgcgt ggtaaatctc aaacaactct tgggtggaga
     2641 gttcatcaaa gcgttttgcg cgccaagaga ggttttttag cattgtatcg tttccagttg
     2701 ccaaccaagt tggcggtatt gtttatagcg gtcacgagcc tgtgctttgg cggtttcttc
     2761 caccggcacg aaatcaataa tctgggtaaa actgccgata aattcgggga gttgggtttg
     2821 gagtgaaatc aacaaatccc gacgttgagc attgcgttta cctttccacg aaatttcgat
     2881 aggcgttggg taagtggtga tttctcccga taaattgtgc ggcacgaacg aatccggatc
     2941 tcttgcccaa agtgcttcgt caatatttaa cgcttgttgc tcggtttcgc atgcaatcag
     3001 tacccgttta cctaatcgcc acgcttgagc cgcaagttcg caggcttgca tttcagcagc
     3061 ggaaagctcg gctgcatcgg cttggcttaa tagataaaat tgtacttgtt tcacagaatg
     3121 ttcccagaaa ttcaatcaga tatttaaact taatattcta gctgaaaatg agtaaaatat
     3181 aaaatctaag cgtttgtttt tgcaaaaaat tgagaaaaaa tgaccacttg tgttgcgttg
     3241 ccttgaggaa ctaattagct tttagacgtt ctaagagaac aatgcactat ttcaatagtt
     3301 ggaaattgtg tagaataccc acttcattta gctattttat aaggaactta ctatgggctt
     3361 atttgatttt gttggcgaca ttggtcgtaa attatttaat aaagaagaag atgcttcaaa
     3421 agcggttaca gagcatttgg cggaagacaa tccgggcgtt gaaaatgtaa acgtaacggt
     3481 tgaaaacggg gtagcgaaaa tttcaggcat tgcttcaacc gcagcagctg ttgagaaagc
     3541 ggtattgatg gcgggtaatg tggctggtat cactgaggta aatattgatg aagtgacctt
     3601 gcctgatgac gtgcaacttg caagtgatga tgagctttat gttatccaaa aaggggatac
     3661 gttgtgggaa atcgccacaa aagcttatgg taacggtgca aaatataaag cgattgtaga
     3721 agcaaataaa gaagttatta aagacgaaaa taaaatcttc ccagggcaaa aaattcgtat
     3781 cccgaaaggt ttataatcaa attgaaagag ctaagctggt cgaaagttta gctctttttg
     3841 taggtggtgt tagactgaaa atggatattg aatggcaggg tggtattcat aaccttcaac
     3901 tttgaaatca tctaagctca cccaagtttc taaatcttct aaggatttta tatcaggatt
     3961 aatgattaat ttaggtgcat tgagtggttc tcgcttaagt tgaacatcac gcattaattc
     4021 tagttgatct tcataaatat gcgcattgac aattttatgg aacgcttgtc ctgccttatg
     4081 ccctgtaatt tgagccatta aagctaaaaa ggtatagcat tgaatcatat tccaatttaa
     4141 cccaagcggt acatctgccg aacgctgagt actattcagg taaagcgtgc catcaagtag
     4201 agaaaaatga tggctgtgta aacaaggacg taagcagccc atatggaaag cgccggggtg
     4261 gtagaaggta taaatttcac cacggttatc aattcctttt ttcaaatcgt ccacaatttg
     4321 tcgcaataaa tcgactgagc caccgtctgg tttcgggaaa ttacgcccta ctgcgccgta
     4381 aaccaagccc atatcatctt ccccttttcg atagggatta gcaagccatt gtgcattttc
     4441 atttgcatta gcgtcccacg attttgtgcc taattgacgg aaatcagcag cattactata
     4501 gcctcgaata tagcctaaaa gttcggcaat cgcagctttc caataactac ggcgagtggt
     4561 aactaaagga aattctcctt tttctacgtc ataagttaag tcagcattaa tgactgtgag
     4621 gcagtgtttg cctgtacgtt catttgcaac ccatttgcct tcgctaacga tgcggttaca
     4681 taagtctaaa tactgtttca ttatttacct cataaaaaat tttaggtaat tttgccattt
     4741 attcggtaaa atagctaaaa ctttatgaca caacacaata aggagttatg gatatgaaag
     4801 gtataatgaa atccattctg gttttttcca ccgctgtttt tttagcagct tgttcatcga
     4861 ataaaagcgg ttggacacgt ttaaatgata atgatgttga tcagaaatct tatgctattg
     4921 cttatggtgc aacggctcag acttatgcgg atagagtaaa tgaaagctat gatatcaatt
     4981 cctttatgaa tggggtaaat gattggtaca ctaaaaaggt tacattgcca attgagcaaa
     5041 ttagagcaat aacgattaat cgaatgttag accataatgt gtatgcttat tatagtggtg
     5101 tgatttatgc cgcagatttg caggcaaatt tcaatcattt agatcctaat tgttgggggc
     5161 ttgttcaacc agcgagtatg acccagggca ttcacgatgc gatgttagat ttacagaaga
     5221 acaaagttcg tggagatgag tatatcaaaa atggggttga gcaaatattg cacctttgtg
     5281 taaaaacgat tgctgaagat gaaaatgaat cgcaatctaa aggtaaaacc aaaaagcata
     5341 aataagttaa gctatgacaa gcggtaaaat ttttaaaaaa ttttaccgct tttttataac
     5401 cgtatgaaat gtttaatatt tattctatga aacttaaaaa aacagcgttt tgtttattca
     5461 ataggcaaac actcgggatt tttcaatttt caggaaaaag aatttgacat ctttttaaat
     5521 tctagtaata tggcgcccac agacacagtg agtggtgaga tggccgagca ggctgaaggc
     5581 gctcccctgc taagggagta tagggttaaa aagctctatc gagggttcga atccctctct
     5641 caccgccatt tactttatca cgcacccgta gctcagctgg atagagtact cggctacgaa
     5701 ccgagcggtc agaggttcga atcctctcgg gtgcgccatt ttaattttta ctctattcaa
     5761 attaaaatgg ttgctgataa aattaaataa acttacaatt caaatatacg c
//
LOCUS       DANLZQ010000134         5740 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.134, whole genome shotgun sequence.
ACCESSION   DANLZQ010000134 DANLZQ010000000
VERSION     DANLZQ010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5740)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5740)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5740
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.134"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(127..1893)
                     /gene="aspS"
                     /locus_tag="PXE50_002398"
     CDS             complement(127..1893)
                     /gene="aspS"
                     /locus_tag="PXE50_002398"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HDL5623250.1"
                     /translation="MMRSHYCGALNRSHLGQTVTLSGWVHRVRNLGRFIFMQIRDREG
                     IVQVFFDEKDEALFKQASALRSEACVQIQGEVIARDESQINKEMATGEIEVLVKNLVV
                     YNNAEVLPLDFNQNNTEEQRLKYRYLDLRRPEMAEKLKTRAKITSFVRRFMDDNGFLD
                     IETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFR
                     DEDLRADRQPEFTQIDVETSFMTAEEVRALMEAMIHGLWKETLGVDLGKFPMMTWNEA
                     MTRFGSDKPDLRNPLEMVDVADILKSVDFKVFSGPANDPKGRVVALRVPNGAALTRKN
                     IDDYTQFVGIYGAKGLAWLKVNDMNTGLEGIQSPVAKFLNEEVLKALVKRLNLQKDDI
                     VFFGADNWHVATNAIGALRLKVGNDLGLTDTTAWKPLWVIDFPMFERDDEGNLSAMHH
                     PFTSPKELSPEELVQDPENAVANAYDMVINGYEVGGGSVRIFSQQMQQTVFSILGINE
                     EEQKEKFGFLLDALKFGTPPHAGLAFGLDRLTMLITGTDNIRDVIAFPKTTAAACLMT
                     EAPSYANPKALEELAIRTIPQE"
     gene            complement(1999..2910)
                     /locus_tag="PXE50_002399"
     CDS             complement(1999..2910)
                     /locus_tag="PXE50_002399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine exporter LysO family protein"
                     /protein_id="HDL5623251.1"
                     /translation="MLYGLAIVLIPLFLGYLITLKNHRHMAIVNRVVSLCLYLILLVM
                     GISLGQIDNILTELPQIGGTAFSLVVILLLSNIIGLVIYDKLQPMKRDKVNQDQLPSR
                     LHLLIDSFKLIGITLLGGIIGYFTKGVVDFPLHASTYVLEVMIFGVGIQLRNSGIPLR
                     EVFFNKRGIYTSIVMVASSLIGGVISAFTLDLSLAKGLTFASAFGWYSLSSVLVNDAW
                     GPIYGSIAFFNDISREILCLFLVPLFMRQFPSTAVGIGGATSLDCMLPIIQKSGGIQI
                     VPLAISFGFIVNLAAPLLLAVFIGLEG"
     gene            3033..4115
                     /gene="dinB"
                     /locus_tag="PXE50_002400"
     CDS             3033..4115
                     /gene="dinB"
                     /locus_tag="PXE50_002400"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HDL5623252.1"
                     /translation="MSIQAKHKRKIIHIDMDCFYAAVEMRENPALVGKPVAVGGNANQ
                     RGVLTTCNYEARKFGLHSAMPTATALKKCPNLILLPVNMALYKSVSAQIHEIFHRYTD
                     VIEALSLDEAYLDVTECERYFGSATWIAQAIRNDIFNELHLTASAGVAPLKFLAKITS
                     DQNKPNGQCVITPDDVQNFVKNLPLAKIPGVGKVTNEKLKQLGFETCGDIQQAEKAVI
                     YRAFGKFGQRLWDFSHGIDERAVEPYRERKSLAVENTLLHDISTLEQAEKIVADLFDK
                     LVFRLQRNWGDTPLTEFKKLGIKLKFDDFSQTTLERTTDGFAYERFGELLQQIFTRRK
                     ERKVRLIGLSVHFPEKKVNKQLNLWE"
     gene            4203..5072
                     /gene="htpX"
                     /locus_tag="PXE50_002401"
     CDS             4203..5072
                     /gene="htpX"
                     /locus_tag="PXE50_002401"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HDL5623253.1"
                     /translation="MAKRVILFLLTNLAITFVLGIVLNLIFKVTGIQGQSTAGILVLS
                     LVFGFSGSLISLFMSKSMALRSVGAEVITQPRNEAEQWLFNTVQRQAQQANIPMPDIA
                     IYHSADVNAFATGATKSNSLVAVSTGLLNSMTKDEAEAVVAHEVAHIANGDMVTMTLL
                     QGVLNTFVIFLARIISTMAASSRDENGNSSTNTLVFWVVDIVLQMVFGVLATMIAMWF
                     SRQREFRADAGSAQLVGKEKMIAALQRLQRVHEPQEMEGSLAAFMINGSRGKELFMSH
                     PPLEKRIEALRNL"
     gene            complement(5126..5620)
                     /locus_tag="PXE50_002402"
     CDS             complement(5126..5620)
                     /locus_tag="PXE50_002402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDL5623254.1"
                     /translation="MTEYLTSFFSLFFSEQNQLFTMFLSGFLSATLLPGNSEIIFTTL
                     ASQHLITYGSLSSFSLFNLLLVATLGNSLGSITTYAIGLLLPRPQNTTNRYSQWALAK
                     SEKYGVLVLLFSWLPIVGDIFCGIAGWLRFSLWQSILFIVIGKLLRYLFLLATLYSVL
                     PHIL"
BASE COUNT         1714 a         1149 c         1243 g         1634 t
ORIGIN      
        1 agaagagaaa agagtcttta ttatgttatt tagagaataa ttttgcgatt attacttttg
       61 caaagttttt cactttttcg accgcttgtt aaataaaaag ggcgaaaaat gtttcgcccc
      121 taccgattac tcttgtggaa ttgtacggat tgctaactct tccaacgctt tcggattcgc
      181 atagcttggt gcttctgtca ttaaacacgc tgcagcggtg gttttcggga aagcgatgac
      241 atcacgaatg ttatcagttc ctgtaatcaa catcgttaag cggtctaaac cgaaggctaa
      301 gcctgcgtgt ggcggagtac cgaattttaa cgcatctaat aagaaaccga atttctcttt
      361 ttgctcttct tcgttaatgc ctaaaatgct gaacacggtt tgttgcatct gctggctgaa
      421 aatacgtacc gagccaccgc ccacttcgta gccgttaatt accatatcgt aagcgtttgc
      481 caccgcattt tccggatctt gcactaattc ttccggcgat aattctttcg gtgaagtgaa
      541 cgggtggtgc attgccgata agttgccttc atcatcacgt tcaaacattg ggaaatcaat
      601 cacccataac ggtttccacg ctgtggtatc ggttaagcct aaatcgttcc ccacttttaa
      661 gcgtaacgca ccgatggcgt tagtcgcaac gtgccagtta tccgcaccga agaatacaat
      721 gtcgtctttt tgcaagttta agcgtttaac taaggctttt agcacttctt catttaagaa
      781 ttttgcaacc gggctttgaa tgccttctaa acctgtgttc atatcattca cttttaacca
      841 agccaagcct tttgccccat aaatgccgac aaattgggtg tagtcatcaa tatttttacg
      901 ggttagagct gcaccgtttg gcacacgaag tgccactaca cgccctttcg gatcattcgc
      961 cggaccgcta aatactttga aatcaaccga ttttaaaata tctgccacat caaccatttc
     1021 cagtgggtta cgcaaatccg gtttgtctga accgaaacgg gtcattgctt cattccacgt
     1081 catcattggg aatttaccga gatcaacgcc taaggtctct ttccataagc cgtggatcat
     1141 cgcttccatt aatgcacgca cttcttcggc agtcataaag ctggtttcca cgtctatttg
     1201 ggtaaattcc ggctggcggt cggcacgcaa atcttcatca cggaaacatt tcacgatttg
     1261 gtaataacgg tcgaagcccg acatcattag caactgttta aatagctgag gtgattgtgg
     1321 cagagcatag aatttgcctt tatgcacacg gcttggcacg aggtaatctc tcgcaccttc
     1381 aggagtagct ttggtcagca tcggggtttc aatgtctaag aaaccgttat cgtccataaa
     1441 acggcggaca aaactggtga ttttagcacg ggttttgagc ttttctgcca tttcagggcg
     1501 gcgtaaatcc aaatagcggt attttaaacg ctgttcttcg gtattgtttt gattgaagtc
     1561 taacggcaat acttcagcgt tgttatacac cactaaattt tttactaaca cttcaatttc
     1621 accggttgcc atctctttat tgatttgcga ttcatcacgg gcaatcactt caccttgaat
     1681 ttgcacgcac gcctcagaac gtaaggccga tgcttgcttg aaaagtgctt catctttctc
     1741 atcgaaaaac acctgcacaa tgccttcacg atcacgaatt tgcataaaaa taaaacgacc
     1801 aaggttacga acacgatgaa cccaaccgct taaggtaact gtttgtccaa ggtgtgagcg
     1861 gtttaatgca ccgcagtagt gagaacgcat cataaaatta tccttttgaa aataaatatc
     1921 ccaagtttcg gggaaaactt aaggattata gcggaaaatt cagcgaagat ggataaataa
     1981 aagcaaacaa gcggtgattt atccttccag cccaataaaa acggctaata acaatggagc
     2041 ggctaaatta acaataaaac cgaagctgat tgccagcggc acaatttgaa taccgcccga
     2101 tttttgaata atagggagca tacaatctaa tgaagtcgct ccgccaatgc cgactgcggt
     2161 ggacggaaat tgacgcataa acagtggtac taaaaacagg cataaaattt cacgcgagat
     2221 gtcgttaaaa aaggcaatac tgccgtaaat cgggccccaa gcatcgttta ccaatacgct
     2281 tgaaagggaa taccaaccga atgcagaggc aaaggttaag cctttagcaa gggataaatc
     2341 taaggtgaat gccgaaatca cgccaccaat cagggaactt gccaccatta caatcgaggt
     2401 ataaatcccc cgcttgttaa agaacacttc acgcagggga ataccgctgt ttcgcagttg
     2461 aatccccacc ccgaaaatca tcacttctaa cacataggtg ctggcgtgca gagggaaatc
     2521 caccacgcct ttggtgaaat agccgatgat cccgcctaat aaggtaatgc cgattaattt
     2581 aaaggaatca atcaacaaat gcaggcggga gggaagttga tcttgattga ctttgtctct
     2641 tttcatcggt tgtaatttgt cgtaaatcac caagccgata atgtttgaaa ggagtaaaat
     2701 caccactaaa ctaaacgccg taccgccaat ctgtggcagt tcggtgagaa tgttatcaat
     2761 ttgtccgaga gaaatcccca tcactaataa aatcaagtaa aggcagaggc tgaccactct
     2821 gtttactatt gccatatggc ggtggttttt gagggttatt aagtaaccga gaaaaagtgg
     2881 aatcagcaca atggctaaac cgtagagcat tttttatcct ttttatcgct atttttaaac
     2941 ttgaaattct aacaataagg gcataaaata aaactgtttt tatatacagt tatttgtgtt
     3001 gcaagcggtc gtttttgggg aaaatattgc aaatgtcgat tcaagctaaa cataagcgaa
     3061 aaattatcca tattgatatg gattgttttt atgcagcggt cgaaatgcgg gaaaacccgg
     3121 cgttggtcgg taagccggtg gcggtgggcg gcaatgctaa tcaacgaggt gtgctgacaa
     3181 cctgtaatta cgaggctcga aaattcggct tacacagtgc aatgccaacg gcaactgcgt
     3241 tgaagaaatg cccgaattta attttattgc cggtgaatat ggcgttgtat aaatcggttt
     3301 ccgctcaaat tcacgaaatt tttcatcgct atacggatgt gattgaagcc ttgtcgcttg
     3361 atgaagccta tttagatgta accgaatgcg aacgctattt tggctccgcc acttggattg
     3421 ctcaagcaat ccgcaatgat attttcaatg aattgcattt aactgcctcg gcaggagttg
     3481 ctccgcttaa atttttagca aaaattacct ccgatcaaaa caaacctaac ggacaatgtg
     3541 tgattacgcc tgatgatgtg caaaattttg tgaaaaatct accgcttgca aaaattccgg
     3601 gtgtggggaa agtaaccaat gaaaaattaa aacagcttgg ctttgaaacc tgtggtgata
     3661 ttcagcaagc agaaaaagcg gttatttacc gagcgtttgg caaattcggg caacggcttt
     3721 gggattttag ccacggtatt gatgaacgag cggtagagcc ttatcgtgaa agaaaatcgc
     3781 tggcggtgga aaatacgctg ttgcacgata tttcaaccct tgagcaagcg gaaaagattg
     3841 tggcagattt attcgacaaa ctggtttttc ggttgcaacg aaactggggc gatacgccat
     3901 taactgagtt taaaaagtta ggcattaaac tcaagtttga tgattttagc caaaccacgc
     3961 ttgaacgaac caccgatggc tttgcgtatg agcgatttgg cgagttgcta cagcaaattt
     4021 ttacccgaag aaaggaacga aaggtgcgat taatcggtct aagtgttcac tttcccgaga
     4081 aaaaagtgaa taaacagtta aatttgtggg aataattgta aataatgact tgaaattaag
     4141 gctaaagtca ttatcttatt cgtgcaatca ttgcatctat atttttggag attgaaaaca
     4201 ttatggcaaa acgtgtcatt ctatttttat taactaactt agcgattacc tttgttttag
     4261 ggatcgtatt aaaccttatt tttaaagtga ccggcattca agggcaaagc actgccggta
     4321 ttttggtgct ttcgttagtc ttcggtttca gtgggtcttt aatttcgcta tttatgtcga
     4381 aatcaatggc attgcgttcg gttggggcag aggtgattac acagcctcgt aacgaagcgg
     4441 agcaatggtt attcaacact gtacaacgtc aggctcagca agcgaatatc ccaatgccgg
     4501 acattgcgat ttaccattcg gctgatgtaa atgcattcgc tacaggagca acgaaaagta
     4561 attctttagt tgcagtcagc accggcttgc tgaattcaat gactaaagac gaagctgaag
     4621 cggtagtagc acacgaagtg gcgcacattg cgaatggcga tatggttaca atgactttat
     4681 tacaaggcgt gttaaatact ttcgtcattt tcttagctcg tattatttcg acaatggcgg
     4741 caagttcacg tgacgaaaat ggcaattcaa gcaccaatac gctggtgttc tgggtagtag
     4801 atattgtgtt acagatggtg tttggtgtgt tagcaacaat gattgcaatg tggttctctc
     4861 gccaacgtga atttcgtgca gatgcaggct ctgctcaatt agtcggtaaa gagaaaatga
     4921 ttgcggcatt acaacgcttg caacgtgttc acgaaccgca agaaatggaa ggctctcttg
     4981 ctgcctttat gattaacggt agccgtggta aagagttgtt tatgagccac cctccgttag
     5041 aaaaacgtat tgaagcgtta agaaacttat aaagcacaag cggttgtttt tgtaaaattt
     5101 tttgcaaaac agccgctttt gttttctata aaatatgcgg taacaccgaa tagagagttg
     5161 ccagcaaaaa cagataacgt aacaatttcc caatcacaat aaagagaatg ctttgccaaa
     5221 ggctaaaccg tagccagccg gcaatgccac agaaaatatc gcctacaatc ggtaaccaac
     5281 taaaaagcaa gactaacacg ccatattttt cacttttggc taatgcccat tgtgaataac
     5341 gattggtagt attctgtggg cgagggagta atagccctat cgcataagtg gttatgctac
     5401 ctaaactatt acctaaggtt gcaaccaaga gtaaattgaa cagtgaaaat gaggataaag
     5461 agccataagt gatgagatgt tggcttgcta aggtagtgaa gataatttca gaatttccgg
     5521 gtaagagggt agcgcttaga aatccactca gaaacatagt aaagagttga ttttgttcgg
     5581 aaaagaataa actgaaaaag gaagtgagat attctgtcat aaaattgtag ttggtttgtt
     5641 attaaaatgt agttataaat tttcttgaat gttgtgtttt ttatggattt tgttctatat
     5701 caaaaaaaga catcgaaata cctctgattg tgtaatattt
//
LOCUS       DANLZQ010000135         5677 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.135, whole genome shotgun sequence.
ACCESSION   DANLZQ010000135 DANLZQ010000000
VERSION     DANLZQ010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5677)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5677)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5677
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.135"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            22..834
                     /locus_tag="PXE50_002403"
     CDS             22..834
                     /locus_tag="PXE50_002403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDL5623255.1"
                     /translation="MGRPELERAVLSVQNQTYPCKHYVFVDGEKYHQQAADILKNFPS
                     VIVTYLPMNTGADGWVNSSINAIAPFLVKEDIICYLDDDNWFEPTHVESGVHALLEMQ
                     SDYAYSLRNFYDLDGEFLCIDTIESLGEYNCVYQEPLECNYQLGGVKGVLSINLNDCQ
                     HIDTNCYFIRSEIARLISTAWYTGIHNDRNVYKKLQELALKGNCTKKVTVNYTLDTRK
                     YYGSVFNELLEEPFLLSEYDAYQFTNEVIKFHSEESLKAWGGCLIWEQNNGS"
     gene            966..1664
                     /gene="aphA"
                     /locus_tag="PXE50_002404"
     CDS             966..1664
                     /gene="aphA"
                     /locus_tag="PXE50_002404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid phosphatase AphA"
                     /protein_id="HDL5623256.1"
                     /translation="MTAATMFASLIAFSAQAGGPKVAYTQPGIDMRTHEAQQAPIHWV
                     SIEQIKESIKDLPPMAVSFDIDDTVAATSGCFHYGKQKYSPDDFSYLKNQDFWDEINA
                     GCDKYSLPKQVAINLIKMHQERGDQVYLITGRTAGKNEQVTTIMQKYLGIKNMQPVNF
                     MGGKAHSTKYDKTPAIIEHKVQIHYGDSDDDILAAREAGIRGIRILRAANSNYTPFPQ
                     AGGYGEEVVVNSSY"
     gene            1845..2606
                     /gene="udp"
                     /locus_tag="PXE50_002405"
     CDS             1845..2606
                     /gene="udp"
                     /locus_tag="PXE50_002405"
                     /EC_number="2.4.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine phosphorylase"
                     /protein_id="HDL5623257.1"
                     /translation="MSEVFHLGLTKAMLKGAKIAIVPGDPARSERIAKKMDNPEFLAS
                     TREFTSWLGYLDGEPVVVCSTGIGGPSVSICVEELAQLGVRTFLRIGTTGAIQEHINV
                     GDILITTGAVRLDGASQHFAPMEYPAVANFECTNALYAAAVESGVTPYVGITASSDTF
                     YPGQERYDTFTGKIYRHFQGSLKQWQDLNVMNFEMESATLFTMCSALGLRAGMVAGVI
                     VNRTQQEIPNEATIHDTEHKAVSVVVEAARKLIKG"
     gene            2681..3277
                     /locus_tag="PXE50_002406"
     CDS             2681..3277
                     /locus_tag="PXE50_002406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623258.1"
                     /translation="MKKWLMLITLIFGITACFSSLEFDESKQEKINSFLIVGNKLYVV
                     GELHDYEFEHQQVAELNNFLKSLIANKIKSVEANFEVKESKKVEGSYRIILDGKSLTE
                     SERSTVMDTFHFNSAQNPSITYQAEGNLVKLANREELLQKFRFKQALEANVRYYKMKS
                     GLQNTAEGALSIVMLPVAVVAVLPFYMFWVGACATYGC"
     gene            3288..3773
                     /locus_tag="PXE50_002407"
     CDS             3288..3773
                     /locus_tag="PXE50_002407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HDL5623259.1"
                     /translation="MYSLYLKILSECDWCCDPKTLSTYQQEWLLHEGSLTQKLYDVAT
                     NFNVEVVQEKWIAKNSEKTTACNEDVWSREVLLKDGEKNWIFAQTLVPRSTIENIAQN
                     VLELGNQPIGLWLFSQNPTRTKLEWTQTENGLFARRGVYEIRGYSLEIRELFLETFPY
                     L"
     gene            complement(3811..4680)
                     /locus_tag="PXE50_002408"
     CDS             complement(3811..4680)
                     /locus_tag="PXE50_002408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HDL5623260.1"
                     /translation="MKNINTQAVGWIGLGQMGEPMAKHLLNSGVNVGVYNRDPAKAEK
                     VVEAGGTLYPSVLELVKAYDVIFLMIADYAAVQQVLSDEVLAELNGKVVVNMSTISPS
                     QNQAVEALLAQHGAEFVEAPVSGSSKVAEAGKLLVLAAGKEETVELLKPLFAAFSTTT
                     FYYGEVGKAGGIKLMINSLLGIFIQAYGEALNFADQYGIPKEKVIEMISGSFMNSPIF
                     QAKVPMYQANEFPPAFMMKHMTKDFNLASEEIAKLGKSYPLIEQATKTYNQANDSGLS
                     EVDMAAIYQFLAK"
     gene            4810..5601
                     /locus_tag="PXE50_002409"
     CDS             4810..5601
                     /locus_tag="PXE50_002409"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HDL5623261.1"
                     /translation="MKPTILLYDSGMGGLTIYDEIRKVLPHAHYLYCFDNAFFPYSEK
                     SEAVLIERAVKIVQKIAEKQPLDMVVVACNTASTVVLPALREHFNFPIVGTVPAIKPA
                     AAISETKVIGLLATKGTVARPYVDELIRKYAQDCTVEKIGTTDLVEIVEEKQRSGKVD
                     MNRLQKVVEAWQGKPELDTVILGCTHFPLVKAELQQLLPDVKYFVDPGVGIAKRVLSL
                     LEERKFQQKADFENQAFCTKQSSAFNIKQDVMQNWGFNNLSVIDI"
BASE COUNT         1766 a          990 c         1182 g         1739 t
ORIGIN      
        1 gtagctgtta tcagttcaac aattggtcgt cctgaattag aaagagctgt tttaagcgta
       61 caaaatcaga cttatccttg taaacattat gtttttgttg atggagagaa atatcaccaa
      121 caagcggctg atattttaaa gaattttcca agtgttattg ttacttatct cccaatgaat
      181 accggggctg atggttgggt aaatagcagc attaatgcaa ttgcaccatt tttagtgaaa
      241 gaagatatta tttgttatct ggatgatgat aattggtttg aacctactca cgttgaatct
      301 ggtgtgcatg ctttattaga aatgcaatct gattatgctt actctttacg taatttttat
      361 gatttagatg gcgagttttt gtgtattgat acgattgaat cgttgggaga atataattgc
      421 gtttatcaag aaccattaga atgtaattat caattaggtg gtgttaaagg tgttttatca
      481 ataaatctga atgattgtca gcatattgat acgaattgct attttattcg tagtgagata
      541 gctcgcctta tcagtacggc ttggtacaca ggtattcata atgatagaaa tgtatataaa
      601 aaattacaag aattggcact aaaaggaaat tgtacaaaga aagttacggt taattatact
      661 cttgatacac gtaaatatta tggatcagta tttaatgaat tattagagga gccattttta
      721 ttaagcgaat atgatgccta tcaatttacg aatgaggtga ttaaatttca ttcagaagaa
      781 agccttaaag cttggggagg ttgcttgatt tgggaacaga acaatggctc ataagcgtta
      841 agcgtaatcg tttgcttgtg atcatattca caaaataagg tttttgtatt agctaagagt
      901 gcctaataag attaaaatag gtatggttaa tcatatggag gtattttata aaatttacat
      961 taaaaatgac ggcagcgaca atgtttgcat ctcttattgc tttttcagca caagcaggcg
     1021 gaccaaaagt agcttatacc cagccgggaa ttgatatgcg aacacatgaa gcacagcaag
     1081 cgccaattca ttgggtatct attgagcaaa ttaaagaaag catcaaagat ttacccccta
     1141 tggcggtaag ttttgatatt gatgatactg ttgctgcaac tagcggttgc ttccactacg
     1201 gaaagcaaaa atattcgcca gacgatttca gctacttaaa aaatcaagat ttttgggacg
     1261 aaattaatgc tggctgtgat aaatattctt tgccaaagca agttgctatt aatttaataa
     1321 aaatgcacca agaacgtggt gatcaagttt atttaattac ggggcgtacc gcaggtaaaa
     1381 atgaacaagt tacaacgatt atgcaaaagt atcttggtat taaaaatatg caaccggtaa
     1441 attttatggg ggggaaagca cattcaacaa aatatgataa aacccctgcg attattgaac
     1501 ataaggtgca aattcactat ggtgacagtg atgatgatat cttagctgcc cgtgaagccg
     1561 gtattcgagg tattcgtata cttcgtgcag caaattctaa ttatacgcca ttccctcagg
     1621 ccggaggata tggtgaagaa gttgttgtca attcaagtta ttaatttctt agtctgaaat
     1681 atggccacca ttgcgtggcc atcatttttt atttatataa tgacgaaacc gtttaccttt
     1741 gatctagttc acaaaatcaa actttgcttg caaaaaattg tcgtaaatta accgcttgct
     1801 aagatagaat ggctcatatc cagttagata aaaaggagat aaaaatgtct gaagtatttc
     1861 atttaggttt aaccaaagcc atgctcaaag gtgcaaaaat tgcaatcgtt ccgggcgatc
     1921 cggctagaag tgaacgtatt gccaaaaaaa tggacaaccc agagttttta gcctcaaccc
     1981 gtgaatttac ctcttggtta ggttatttag atggcgaacc ggtggtggtt tgttcaaccg
     2041 gtattggcgg accgtcggtg tcgatttgtg tggaagagtt agcacagtta ggtgttcgca
     2101 cattcttacg cattggcaca acaggtgcaa ttcaagagca tattaatgta ggcgatattt
     2161 taattaccac cggagcggtg cgtttagatg gtgcgagcca acattttgca ccaatggaat
     2221 atcctgcagt agcgaatttt gaatgtacta atgctcttta tgcagcagca gtggaatcag
     2281 gcgttacacc ttatgtgggg attacagctt catcagacac tttctacccg gggcaagaac
     2341 gttacgacac tttcaccggc aagatctatc gtcatttcca aggttcatta aaacagtggc
     2401 aagatctcaa tgttatgaat tttgaaatgg aatccgccac tctctttacg atgtgttcgg
     2461 cattaggctt gcgagcaggt atggttgctg gtgtaattgt aaaccgcact caacaagaga
     2521 ttccgaatga agcaaccatt cacgacaccg aacataaagc cgtttcggta gtagtggaag
     2581 cggcaagaaa attaattaaa ggctaatctt taaatttaaa agcaaaaaag gtaaattgtc
     2641 tttgttacaa tttacctttt ttctttttag ggagctttct atgaaaaaat ggttgatgtt
     2701 aattacatta attttcggca ttaccgcttg tttttccagt ttagaatttg atgaaagtaa
     2761 acaagaaaaa atcaattcat tcttgattgt tggtaataaa ttatatgtgg tgggtgaact
     2821 gcacgattat gaatttgagc atcagcaagt tgcggaactg aataattttc tcaaaagcct
     2881 aattgctaat aaaatcaaat ctgttgaggc aaacttcgag gttaaggaat ccaaaaaagt
     2941 ggaaggtagt tatagaatta ttttagatgg gaaatcactt acagaaagtg aaagaagtac
     3001 ggtgatggat acctttcatt ttaattcagc tcaaaatcca tctattactt atcaggcgga
     3061 agggaacttg gtgaaattag ccaatagaga agagcttttg caaaaattcc gatttaaaca
     3121 agcgcttgag gcgaatgtgc gttattacaa aatgaaaagt ggtcttcaaa atacggctga
     3181 aggagcgtta agtattgtaa tgttgcctgt tgctgtagta gctgttttac cattctatat
     3241 gttttgggtt ggtgcttgtg ccacttacgg atgttaaata actttttatg tattctctat
     3301 acctgaaaat tttatcggaa tgcgattggt gttgtgatcc aaaaacactt tctacctacc
     3361 agcaagaatg gcttctgcac gaagggtcac ttacccaaaa attgtatgat gtcgcaacca
     3421 atttcaacgt ggaagtagta caagaaaagt ggattgcaaa aaacagtgaa aaaacgaccg
     3481 cttgtaatga agatgtttgg tcgcgagaag tgttactgaa agatggtgaa aaaaattgga
     3541 tttttgccca aactcttgtg ccaagatcaa caatcgaaaa tatcgctcaa aacgtgttgg
     3601 aattgggcaa tcagccgatt ggtttatggc tattttctca aaatcctact cgcaccaaat
     3661 tagaatggac acaaacagag aacggtttat tcgctcggcg tggggtgtat gaaattagag
     3721 ggtattctct ggaaattcga gagctttttt tagaaacctt tccttattta taaaaaaatc
     3781 ggttggtaat gacaccaacc gattttcatc ttattttgcc aagaactgat aaattgcagc
     3841 catatccact tcgctcaagc ctgaatcatt ggcttgattg taggttttag tggcttgctc
     3901 aataagcggg taagatttgc ctaatttcgc aatttcttcg cttgccaaat taaaatcttt
     3961 ggtcatatgt ttcatcataa acgcaggcgg aaattcatta gcttggtaca tcggcacttt
     4021 tgcttggaag atcgggctgt tcataaacga gcctgaaatc atttcgatta ctttctcttt
     4081 cggaatgcca tattggtcgg cgaagtttaa cgcctcgcca taggcttgaa tgaagatgcc
     4141 cagtagcgag ttgatcatca atttaatccc accggcttta cccacttcac cataatagaa
     4201 agtggtggta ctaaaggcag cgaaaagcgg tttgagcaac tcaacggttt cttctttacc
     4261 ggcagccagt accaatagtt tacctgcttc tgccactttg cttgaaccgg aaaccggagc
     4321 ttcaacaaat tctgcaccgt gttgggctag tagagcttct accgcctggt tttggcttgg
     4381 ggaaatggtg ctcatattca ccactacttt gccgtttaat tcagccaaca cttcatcgct
     4441 taacacctgt tgcacggcgg catagtctgc aatcatcaag aaaatcacat cgtaggcttt
     4501 caccaattcc aacacagaag gatataatgt gccgcctgct tcaactacct tttctgcttt
     4561 tgctgggtcg cggttgtaaa cgcccacgtt cactccgcta tttagcaaat gttttgccat
     4621 cggttcgccc atttgcccta aaccaatcca accgactgct tgtgtattaa tgtttttcat
     4681 tatttttctc cttactgaat aaagcaaatt gattattgcg attttccctc atcaagtcaa
     4741 atagagagaa cttgaatata gcaatggaaa agagtagcat tttagcactt acttttttga
     4801 acaataccaa tgaaaccaac aattctttta tacgattccg gaatgggcgg attgacgatt
     4861 tacgatgaaa tccgaaaagt gttaccgcac gctcactatt tatattgctt tgataacgct
     4921 tttttcccat attccgagaa gtcggaagca gttttaattg agcgagcggt caaaattgtg
     4981 caaaaaattg cagaaaaaca accgcttgat atggttgttg ttgcttgtaa tacggcaagc
     5041 acagtggttc tgccggcatt gcgtgagcat tttaattttc cgatagtagg aactgtaccg
     5101 gcaattaaac cggcagcggc aatttccgaa actaaagtca tcggcttgct cgccactaaa
     5161 ggcacggttg ctcgccctta tgttgatgaa ttgataagaa aatatgctca ggattgtacg
     5221 gtagaaaaaa ttggcacaac cgatttggtt gaaattgttg aagaaaaaca acgaagcggt
     5281 aaagtggata tgaaccgact acaaaaagtg gtcgaggctt ggcaaggtaa gccggaattg
     5341 gatacggtta tactcggttg tacccatttt cccttagtca aagctgaatt acagcaatta
     5401 ttgcccgatg tgaaatattt tgttgatccg ggtgtaggta ttgccaaacg ggtgctaagc
     5461 cttttggaag aacgcaaatt tcaacaaaaa gccgattttg aaaatcaagc attctgcact
     5521 aaacaaagtt ctgcatttaa tatcaaacaa gacgttatgc agaattgggg atttaataat
     5581 ctttcggtga ttgatattta aacaaaacaa tctgttttga tgaaaaaagg ttcagttgag
     5641 caaaaacttt aaaaaagggc ttgcactcaa ttttaaa
//
LOCUS       DANLZQ010000136         5022 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.137, whole genome shotgun sequence.
ACCESSION   DANLZQ010000136 DANLZQ010000000
VERSION     DANLZQ010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5022)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5022)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5022
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.137"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            6..584
                     /locus_tag="PXE50_002410"
     CDS             6..584
                     /locus_tag="PXE50_002410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623262.1"
                     /translation="MIEFDQIDDSFYHFPFRPRPGDTSSDTATPCIGGVDLVSNPEKV
                     ELIPEAAHSPMLKKLLTDLNTPNSKLLTLGCAYWAHKDNRDTSYAYLEFSFREHSVAT
                     NLEFIRSIDEQFEQFLQENKKQLSIEFSVPEQAFDIVSQALFWSIRPFSYFGSEERIL
                     IYFQAGSPRHQDLEIFLDLLHRFLTEYLVVPA"
     gene            complement(599..674)
                     /locus_tag="PXE50_002411"
     tRNA            complement(599..674)
                     /locus_tag="PXE50_002411"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(639..641),aa:Trp,seq:cca)
     gene            1101..1295
                     /locus_tag="PXE50_002412"
     CDS             1101..1295
                     /locus_tag="PXE50_002412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005714695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623263.1"
                     /translation="MALSRTEIVNRSNAKRGIKLKAFKLHESTIAQIEQLAQQLNIPQ
                     NQLIKLAVEKLQEQTNFTTG"
     gene            complement(1263..1628)
                     /locus_tag="PXE50_002413"
     CDS             complement(1263..1628)
                     /locus_tag="PXE50_002413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623264.1"
                     /translation="MQIDVKGVLNLWGGYVRFTDCKGYPTMQAFMRESPQERTKQRYL
                     ARLDDDTLEKVDRQMRKLQANDKRQFDVLFYKYAVGLENKQVWQKLSLSKTSYHTELL
                     LAERFMEGALAGSEIRLLL"
     gene            complement(1618..1986)
                     /locus_tag="PXE50_002414"
     CDS             complement(1618..1986)
                     /locus_tag="PXE50_002414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /protein_id="HDL5623265.1"
                     /translation="MSDWLEIALPYPPSVNHYWKHTRNGRHYISDKGKAFRAEVVKIC
                     KMFDPFKGAVQTVLQIYYPDKRKRDPDNLEKALWDALKIGGLIEEDDNQILVDKRTIT
                     AGFKKGGMVVLKIKAVGNAN"
     gene            complement(1983..2267)
                     /locus_tag="PXE50_002415"
     CDS             complement(1983..2267)
                     /locus_tag="PXE50_002415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005672808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1364 domain-containing protein"
                     /protein_id="HDL5623266.1"
                     /translation="MANLRKEAKGRECQVRLPGICNHNPETVVLAHYRMAGLNGVGMK
                     PDDIFGAWACSSCHDECDRRTRKLEADYVRQAHAEGVFRTQAILRREGKL"
     gene            complement(2644..2856)
                     /locus_tag="PXE50_002416"
     CDS             complement(2644..2856)
                     /locus_tag="PXE50_002416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623267.1"
                     /translation="MKKNVIRYWLSVPFRIIAVLISLSILTLRYIGYLLIYPLAFFVA
                     VGSFIVIGQWKYQECLDDFKSDFNPI"
     gene            complement(2906..3358)
                     /locus_tag="PXE50_002417"
     CDS             complement(2906..3358)
                     /locus_tag="PXE50_002417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1367 family protein"
                     /protein_id="HDL5623268.1"
                     /translation="MAKYQMMKLPGGILSPLNDEEAERLKSFQNGEQYEIEIKRQRNP
                     AFHRKVFAFFNFCFDCWSGSHSDWEFQDPTAQFDTFRKHLTVMAGFYVQTWNLKGQVR
                     IEAKSLSYANMEQDEFEQAYKALINAAIKHVFNNTKDENTINQLYSFF"
     gene            complement(3477..4049)
                     /locus_tag="PXE50_002418"
     CDS             complement(3477..4049)
                     /locus_tag="PXE50_002418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine methyltransferase"
                     /protein_id="HDL5623269.1"
                     /translation="MTDFDKDTYQTPKYFRNWLNHRYAWFHIDGCSNGKNALYSYWIG
                     KAAEGLDEDTLSGQIAEDFLAENLLDVILERVADWGELLRIFVNPPYSNPLPFVQRAA
                     ELKKAGHIVVMLLPADKSTRWYQVIQENASEVIDIIGGRINFINPLTGEEVKGNNKGS
                     MVAVFDPFVEGIVTRQMPLDKIKELGGYEK"
     gene            complement(4046..4693)
                     /locus_tag="PXE50_002419"
     CDS             complement(4046..4693)
                     /locus_tag="PXE50_002419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication protein"
                     /protein_id="HDL5623270.1"
                     /translation="MSLQKTEQNRPLAVLGEQQGKLSGEVESLVDRIFDQLLASCPSI
                     QYWSEKQVATAKKQWILGFAENGIRTVEQVRQGMKALRAKTDDFVPSIGKFIQWCNTI
                     DYHELGLPDLEQLLKLLDRSLRFDFIEIQKLKFKSNAEYWLITDLYARNKKYSWKDET
                     LRNQAEKALVAMAKRIMSGEQIPPPKPLIEEKKKVPIDPRIQRILDEKKQAGAMQ"
     gene            complement(4693..4977)
                     /locus_tag="PXE50_002420"
     CDS             complement(4693..4977)
                     /locus_tag="PXE50_002420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623271.1"
                     /translation="MLLEQFGITGKLAEDFIVHRKAKKAPITETALNGYQREADKAKI
                     PIQKAVEIAIERGWTGFKADWQWQDDQPKHRPKDNMRAEWNNPEAWAEVF"
BASE COUNT         1456 a         1212 c          843 g         1511 t
ORIGIN      
        1 taaaaatgat tgaatttgat caaattgacg atagtttcta tcacttccca tttagaccac
       61 gtccgggcga cacttcaagc gacactgcca caccttgtat tggtggagta gatcttgttt
      121 ccaatcctga aaaggtagaa ctaataccag aagccgcaca ctccccaatg ttaaaaaagt
      181 tactcacaga cttgaacact ccaaacagca aacttctaac actaggctgt gcttattggg
      241 ctcataaaga caatagagat acatcatacg cttacttaga gttttcattc cgggaacatt
      301 cagttgcaac taacctagaa tttatcagaa gtattgatga acagttcgag caattcttgc
      361 aagaaaataa aaagcagtta tctattgaat tttccgtgcc tgagcaagca tttgatatag
      421 tttcacaagc tcttttctgg agtattcgtc cattttctta cttcggaagc gaagagcgca
      481 tcttgatata ctttcaggct ggtagtcctc gacatcagga tttagaaatc tttttggatt
      541 tactacaccg ctttttgact gagtatttag ttgttccagc ataacattta ctcgcatttg
      601 gaaagggtgg ttggactcaa accaacaacc aacgattttg gagaccgttg ctctacctat
      661 tgagctacac ccttaaaatc cgtaaacaaa aaagccccaa gcatttctgc tcagggctgt
      721 aaaattcttt taagttcacc acctatgcaa tgaaccgcaa cttaccataa ataatataga
      781 ttaagtccga actttgcaac actttttaat catttaaatg caaaaaagcc cataatttac
      841 aaaaccatgg gctttttaac gatattttgc ttgaatatat tggttatcca acatataata
      901 aacttgtttt cagtaatagt gctggaaacg agccggtggc gacctttaat cccaccgact
      961 tttggaggga taacaaatgc tttaccgcat tatcctagtt atcattctct tagtgattag
     1021 cctgccagca tactaattga atgaaactaa gtagggggag aaatctccct actcttcaaa
     1081 acctatatta aggatttatg atggcactgt caagaaccga aattgtaaac cgtagcaacg
     1141 caaaacgggg aattaaactt aaagccttta aactgcacga aagcacaatc gcacaaatcg
     1201 agcaacttgc ccaacagtta aatattcccc aaaatcaact aattaaatta gccgttgaga
     1261 agctacaaga gcaaacgaat ttcactaccg gctaatgccc cctccataaa tcgttcagca
     1321 agaagtaatt ctgtatgata tgaagtcttg ctgagcgata acttctgcca aacctgctta
     1381 ttctctaacc ctactgcata tttataaaat agtacatcga attgtcgctt gtcgttcgct
     1441 tgtagcttcc gcatttgccg atcgactttc tcaagcgtat catcatctaa gcgggctaaa
     1501 taacgctgtt ttgttctctc ttgtggagac tcacgcataa atgcctgcat tgtcggatag
     1561 cccttgcagt cggtaaaacg cacatatcca ccccataaat ttaatacacc ctttacatca
     1621 atttgcatta cccaccgcct taatctttaa caccaccatt ccccctttct taaaacctgc
     1681 cgtaatggtt cgcttatcga ctaaaatttg attatcgtct tcttcaatta agccaccgat
     1741 ttttaatgcg tcccacaagg ctttttctaa attatctgga tcacgcttgc gtttatcagg
     1801 atagtaaatc tgcaataccg tttgtaccgc tcctttaaac ggatcaaaca ttttgcagat
     1861 tttcaccact tccgccctaa aggctttccc cttatctgaa atataatgcc taccgtttcg
     1921 ggtatgcttc cagtaatggt tcacactcgg cggataaggc aacgcaattt caagccaatc
     1981 actcataatt tcccttctct ccgtaaaata gcctgcgttc taaatacgcc ctctgcatga
     2041 gcctgtctca cataatccgc ttctaatttg cgagttctac ggtcgcactc atcgtggcag
     2101 ctactgcaag cccacgcccc gaaaatatca tcgggtttca ttcccacacc gtttaatcct
     2161 gccattcgat agtgagccaa taccaccgtt tccggattat gattacagat acccggtaaa
     2221 cggacttggc actctctgcc ttttgcctct ttgcgtagat tagccattcc aacctccttg
     2281 gtctctttta tcaaaccact caataaaaaa gagtgaaccg gcacatacac taagaatagc
     2341 gatagtgatt aaaattacag tcagttcatt gcactggctc acttattaat ctccttaaat
     2401 taaataacat tccacataaa aggaataatc cgcaaccgat aacaaacgat attaaaatcc
     2461 aaaaccctaa ctgaataatc accataaacc acggtgcgtt tttaatattc attaaagtag
     2521 tattaatcgc caataaacag cttggaataa tgccaaataa catcacgagt gcgatagttt
     2581 caaagaattt ttgtcatttt gatttctcct acccccgaat tcgagggaat taataaacac
     2641 acactaaatc ggattaaaat cgctcttaaa gtcatcaagg cattcttgat atttccattg
     2701 accgataaca ataaaactac cgactgccac aaaaaatgct aatggataaa tcaataagta
     2761 cccgatatat ctaagagtaa gaattgacaa agaaataagc actgcaataa ttctgaatgg
     2821 cacgctaagc caatatctaa taacattctt tttcatttta atctcctgca attaaaccta
     2881 attaaatatg gcgatttcgc cttaattaaa aaaacgaata caactgattt atcgtattct
     2941 catctttggt attgttaaaa acgtgcttga tagctgcatt aatcaacgct ttataagcct
     3001 gctcgaactc gtcttgttcc atattggcgt agcttaggct tttcgcctca atccgcactt
     3061 gcccttttaa attccacgtc tgcacataaa accctgccat tacagttaaa tgcttgcgga
     3121 aagtatcaaa ttgagcggtt ggatcttgga actcccaatc ggaatggcta ccactccagc
     3181 aatcaaaaca gaaattaaag aacgcaaaca ccttgcgatg aaaagcggga ttacgctggc
     3241 gtttaatctc gatttcgtac tgctcgccat tctgaaacga tttcaaccgc tcggcttctt
     3301 catcgtttaa cgggcttaaa atcccacccg gcaatttcat catttggtat ttagccatct
     3361 ctatccctca atgaaaatcc aaaagctcta aataccaaat atgctaacca cccgaagaaa
     3421 attagaatcc ctaaaaatcc aatagtagaa tcactcatca cacttcccac ccttcgttat
     3481 ttttcatagc cgcccagctc cttaatctta tccagcggca tttgacgggt aactattccc
     3541 tccacaaacg ggtcgaacac cgctaccatc gagcctttgt tgttgccttt cacttcctcg
     3601 cctgtgagcg gattaataaa attaatacgc ccaccgataa tgtcgatcac ctcactagcg
     3661 ttttcttgga taacctgata ccaacgagta gatttgtctg ccggcaacag cattaccaca
     3721 atatgaccgg cttttttcag ctccgcagca cgctgaacaa aagggagtgg attgctatat
     3781 ggcggattaa cgaagatacg gagtaattcg ccccaatctg ccacacgttc caagatcaca
     3841 tcgagcaagt tttctgccaa gaaatcctcg gcaatctgac cacttagcgt gtcttcgtcc
     3901 aagccttctg ccgctttgcc aatccagtag ctatacaatg cgtttttgcc gttagaacaa
     3961 ccgtcaatgt gaaaccacgc atagcgatga tttagccaat tacggaaata ctttggcgtt
     4021 tggtaagtgt ctttatcaaa atctgtcatt gcattgctcc tgcttgtttc ttctcgtcca
     4081 aaattcgctg aatgcgtgga tctattggca ctttcttttt ctcttcgatt agcggtttag
     4141 gtggtggaat ttgctctccg ctcataattc gttttgccat tgccactaag gctttttctg
     4201 cttgattacg taaggtttca tctttccaac tatatttctt gttacgtgcg tataggtcag
     4261 ttatcaacca atattcagcg tttgatttaa atttaagttt ctgaatctca ataaaatcaa
     4321 atcttaaaga gcgatccaaa agcttgagta actgctctaa atcaggtaat cctaattcgt
     4381 gatagtcaat cgtattgcac cactggataa atttgccgat actcgggacg aaatcatcag
     4441 tttttgctct taacgctttc ataccctgtc gaacttgctc aaccgtgcgg attccgttct
     4501 ccgcaaagcc taaaatccat tgttttttgg ctgtggcaac ttgcttttcc gaccagtatt
     4561 gaatacttgg gcaactcgca agcaactggt caaatattct gtccacaagg ctttcaacct
     4621 caccggataa tttgccttgc tgctcaccta acaccgcaag cggtcgattt tgctctgttt
     4681 tttgcaggct catcaaaaca cctccgccca cgcttcaggg ttattccatt cagctcgcat
     4741 attgtctttt gggcgatgtt taggttgatc gtcttgccac tgccaatcgg ctttaaatcc
     4801 tgtccagcca cgttcaatcg caatttctac cgccttttga atcgggattt tggctttgtc
     4861 tgcctctcgc tgatagccat tcagtgcagt ttcggtaatc ggggcttttt tggctttgcg
     4921 gtgtacgata aaatcctccg ccaatttgcc tgtaatgccg aattgttcaa gcaacaccaa
     4981 cacagcagat tttttagtct cacgtgtgtg tgcgttaata cc
//
LOCUS       DANLZQ010000137         4959 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.138, whole genome shotgun sequence.
ACCESSION   DANLZQ010000137 DANLZQ010000000
VERSION     DANLZQ010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4959)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4959)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4959
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.138"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..579
                     /locus_tag="PXE50_002421"
     CDS             <1..579
                     /locus_tag="PXE50_002421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HDL5623272.1"
                     /translation="TTIMQRISGAKQIDSLTVKIKDDIESQTAEKSIAELLVAKHGKK
                     DFFIMNSDTIKQTITSTTNTMTLLISSIALISLIVGGIGVMNIMLVSVTERTREIGVR
                     MAIGAKQRNILQQFLIEAVVICLIGGVIGILLASAIIWAFNTLGTNFKMMLSPESVII
                     AVLCSTLIGVVFGYIPARNAAQLNPITALAQE"
     gene            663..1433
                     /locus_tag="PXE50_002422"
     CDS             663..1433
                     /locus_tag="PXE50_002422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HDL5623273.1"
                     /translation="MTITNTELEQILNTKLNSSAINDYAPNGLQVEGKREIKKIITGV
                     TATLPLIEKAIEKNADAILVHHGYFWKSENPCIRGMKGKRIKQLLVNDINLFGYHLPL
                     DIHSELGNNAQLAKHLGVKNLQGLEDRPNSIPMYGELENPISANELKQKLEKTLQRTV
                     ILCDEFVHSPQKMIKTIGICSGGGQGYIDLAFEKGCDAFISGEISEQTTHSAREQGIY
                     YFACGHHATERDGVKALGEWLAVEYGLDVEFIDIDNPA"
     gene            complement(1514..2644)
                     /gene="nrdB"
                     /locus_tag="PXE50_002423"
     CDS             complement(1514..2644)
                     /gene="nrdB"
                     /locus_tag="PXE50_002423"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006708197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HDL5623274.1"
                     /translation="MAYTTFSQHKNDQLKEPMFFGQNVNVARYDQQKYEIFEKLIEKQ
                     LSFFWRPEEVDVSQDRIDYAQLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSI
                     PELETWIETWTFSETIHSRSYTHIIRNIVNDPSIVFDDIVTNEEIIKRAKDISAYYDD
                     LIRDSQLYSLYGEGSYQVDGKTCEVSLRSLKRQLYLCMMSVNALEAIRFYVSFACSFA
                     FAERQLMEGNAKIIKFIARDEALHLTGTQHILNIMAYGNDDPEMAEIARECRQEAYEL
                     FLSAAEQEKAWAEYLFKDGSMIGLNRDILVQYIEYITNIRMQAVGLPLPFKARSNPIP
                     WINAWLVSDNVQVAPQEVEVSSYLVGQIDAKVDSRDFGDFEL"
     gene            complement(2671..4941)
                     /gene="nrdA"
                     /locus_tag="PXE50_002424"
     CDS             complement(2671..4941)
                     /gene="nrdA"
                     /locus_tag="PXE50_002424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018356743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HDL5623275.1"
                     /translation="MNKSLMVTKRNGTREQLNLDKIHRVITWAAEGLENVSVSQVELR
                     SHIQFYEGIRTSDIHETIIKAAADLITKDTPDYQYLAARLAIFHLRKKAYGQFEPPHL
                     YEHVKKLVALGKYDADLLSDYTPEEWETMNGFIDHWRDMTFSYAAVKQLEGKYLVQNR
                     VSGEIYESAQFLYLLVAACLFSKYPTASRLDYIRRFYDATSTFKISLPTPIMAGVRTP
                     TRQFSSCVLIECDDSLDSINATSAAIVKYVSQRAGIGINAGAIRALGSPIRGGEAFHT
                     GCIPFYKHFQTAVKSCSQGGVRGGAATVYFPIWHLEAESLMVLKNNRGVEENRARHMD
                     YGVQINKMMYQRLIKGGEISLFSPSDVPGLYEAFFADQAKFEQLYLQYEQDPSIRQRK
                     VKAVELFSLLMQERASTGRIYIQNVDHCNTHSPFNPRVAPIRQSNLCLEIALPTKPLA
                     HFYDEQGEIALCTLSAFNLGTLSNLDELEELADLVVRALDALLDYQDYPVLAARNSSL
                     NRRALGVGVINYAYYLAKNQVRYSDGSANNLTHRTFEAIQYYLLKASMNLAKEQGACA
                     YFDQTTYAKGLLPIDTYKKEIDELTQEPLHYDWEQLRQDILQFGLRNSTLTALMPSET
                     SSQISNATNGIEPPRGYISVKASKDGILKQVVPEYERLKAYYELLWDIPNMDGYLHLV
                     GIMQKFVDQAISANTNYDPNRFAEAKVPMKVLLKDLLTAYKYGLKTLYYQNTRDGAED
                     VQDDLDEGCAGGACKI"
BASE COUNT         1534 a         1043 c          916 g         1466 t
ORIGIN      
        1 accactatta tgcaacgcat ttcaggtgca aaacagatag attcactcac ggttaaaatt
       61 aaagatgata ttgaaagcca aactgccgaa aaaagcattg ccgaattgtt agtagctaaa
      121 cacggcaaaa aagatttctt tattatgaat agtgatacga tcaaacaaac cattaccagt
      181 accaccaata caatgacttt gctgatctcc tctatcgccc ttatttcgct gattgtcggt
      241 ggtatcgggg taatgaatat tatgctcgtt tccgtcaccg aacgcacccg agaaattggt
      301 gtccgaatgg cgattggcgc aaaacaacgc aatattttgc aacaattttt aattgaggcg
      361 gtggttattt gcctaatagg tggtgtgatt ggcattttac tggcaagcgc tattatttgg
      421 gcatttaata ccttaggtac gaattttaaa atgatgcttt caccggaatc ggtgattatt
      481 gccgtgctct gctctacact tatcggtgtg gtatttggct acattccggc aagaaacgcc
      541 gcccaattaa acccaattac tgctctggca caagagtaaa tgcgataact atctgctaca
      601 ctgtaggggc aaaaaatttt ttgcccctac atccattatt atgccaagtt taaggagata
      661 aaatgacaat aaccaatact gaactagaac aaattctgaa caccaaactc aacagctccg
      721 ccattaacga ctatgcccca aatggcttgc aagttgaagg gaaaagagag atcaaaaaaa
      781 ttattaccgg tgtgacagct acacttcccc tgattgaaaa agcgattgag aaaaacgccg
      841 atgcaatttt agtccaccac ggttattttt ggaaaagtga aaacccgtgc attcgaggaa
      901 tgaaaggtaa acgcattaaa cagcttttag tgaatgacat caatctcttt ggttatcacc
      961 taccactgga tattcactcc gaactaggta acaacgccca gcttgctaag catttaggag
     1021 taaaaaatct acaaggttta gaagacagac ctaattcaat tccaatgtac ggtgaattag
     1081 aaaatccgat ttccgccaat gaactgaaac aaaaacttga aaaaacgtta caacgcaccg
     1141 ttattttatg tgatgaattt gttcatagcc cacaaaaaat gattaaaaca atagggattt
     1201 gctccggcgg aggacaaggc tatattgatt tagcctttga aaaaggctgt gatgccttta
     1261 ttagtggcga aatttccgaa cagaccactc actctgcccg tgaacaagga atctattatt
     1321 ttgcttgcgg tcatcacgcc acggaacgag atggcgtaaa agccttaggt gaatggttag
     1381 ccgttgaata tggtttagat gttgaattta ttgatattga taaccctgca taaaaaatac
     1441 aagcggttga atttcctgaa aattttgcaa tttgcaaaaa atcactaaaa atcaaccgct
     1501 tgtatatcat agtctaaagt tcaaaatcgc caaaatcacg gctatctact ttagcatcaa
     1561 tctggccaac caaataagaa ctgacttcca cttcttgtgg tgctacctgt acattatcgg
     1621 aaaccaacca cgcattgatc cacggaatgg ggttggaacg tgccttaaat ggtaatggta
     1681 gtccaacagc ctgcatccga atattagtga tatattcaat atattgcacc aaaatatccc
     1741 gatttagccc tatcatcgaa ccgtctttaa acaggtattc cgcccacgct ttttcttgtt
     1801 cagctgcact taaaaaaagc tcgtaggcct cttggcgaca ttcacgtgca atttctgcca
     1861 tttcaggatc atcattgcca taggccataa tattcaatat atgctgagtg ccggtaagat
     1921 gtaatgcttc atcacgtgca ataaatttga tgattttggc atttccttcc ataagctgcc
     1981 gttccgcaaa ggcaaatgag caagcaaaag agacataaaa acgaattgct tcaagcgcat
     2041 tcacactcat catacagaga taaagttgtc tttttagact acgcaaactg acctcacagg
     2101 tttttccatc aacctgataa ctgccttcac catacaaact atagagttgg ctgtcacgaa
     2161 tcaaatcatc ataataggcg gaaatatctt tggcacgctt aataatttct tcgtttgtga
     2221 caatatcatc aaatactatt gatggatcat tgacaatatt acggatgata tgtgtgtaag
     2281 aacgactgtg aattgtttcg ctaaatgtcc aagtttcaat ccaggtttca agctcgggga
     2341 tagacactaa tggcaaaagc gccacattcg ggctacgccc ttgaatggaa tccaacaagg
     2401 tttggtattt taaattgctg ataaaaatgt gcttttcatg ttcaggcagt tgggcatagt
     2461 caatgcggtc ttgtgacaca tccacttctt ccggtcgcca gaaaaatgag agttgttttt
     2521 caatcagttt ttcaaaaatt tcgtattttt gttgatcata acgcgccaca ttcacatttt
     2581 gtccaaaaaa catgggttct tttagttgat catttttatg ttgtgaaaac gtagtatatg
     2641 ccatgttatt ctcctttatt tctgttctta ttaaatttta caagcaccac cagcacagcc
     2701 ttcatctaag tcgtcttgca catcttctgc tccatcacgg gtattttgat agtaaagggt
     2761 ttttaacccg tatttatacg ccgttaatag atcttttaat aatactttca tcggtacttt
     2821 agcttctgca aagcggtttg ggtcgtaatt tgtattcgcc gaaatcgctt ggtcaacaaa
     2881 tttctgcata atcccaacca aatgcaaata tccgtccata ttaggaatat cccaaagcag
     2941 ttcatagtat gcttttaaac gttcatactc cggcacaacc tgctttaaaa taccgtcttt
     3001 tgatgcttta acactaatat agccacgcgg aggttcaatt ccattggtgg cattcgaaat
     3061 ttgcgacgaa gtctccgatg gcattaaggc agttaaagtg gaattgcgca agccaaattg
     3121 cagaatatcc tgacgtagtt gttcccaatc ataatgaagc ggttcttgag ttaattcatc
     3181 aatttctttt ttataagtat cgatagggag taaccctttg gcataagtgg tttgatcaaa
     3241 ataagcacac gccccttgtt ctttggctaa attcatcgat gcttttaata aataatactg
     3301 aatcgcttca aaggtacggt gagttaaatt attagcactg ccatcggaat aacgcacttg
     3361 gtttttagct aaatagtaag catagttaat cacgcctaca cctaatgcgc gacgatttaa
     3421 tgagctgtta cgtgcagcta ataccggata atcttgataa tctaataggg catctagcgc
     3481 acgaaccact aaatcagcca attcttctaa ctcatctaaa ttgctgagtg tgcctaaatt
     3541 aaatgccgat aatgtacata atgcgatttc cccttgttca tcataaaaat gtgccagtgg
     3601 cttagttggc aaagcaattt ctaagcagag gttcgattgg cgtatcggtg cgacacgagg
     3661 attaaatggg ctatgagtat tacaatgatc gacattctga atataaattc gccctgttga
     3721 agcccgctct tgcatcagta atgaaaacaa ttctacagct ttaactttac gttgccgaat
     3781 gctcggatct tgctcatatt gcaaataaag ttgctcaaat ttagcttgat cagcaaaaaa
     3841 cgcttcatat aaccccggca catctgatgg actaaataaa ctaatctcac cgcctttaat
     3901 taaacgttga tacatcattt tattaatctg taccccgtaa tccatatggc gagcacggtt
     3961 ttcttccaca ccacggttat tttttaatac cattaagctt tctgcttcca aatgccaaat
     4021 cggaaaatac acggtagccg ctccaccgcg aacaccacct tgagagcaag actttactgc
     4081 agtttgaaaa tgtttataaa agggaataca gccggtatga aatgcttctc caccacgaat
     4141 ggggctacct aatgcccgaa ttgcgccggc attaataccg atcccagcac gctgtgaaac
     4201 atatttaacg attgcagccg aggttgcatt gatggaatct aagctatcat cacactcaat
     4261 taacacacag gaactaaatt gacgagtagg tgtacgcact cctgccataa tcggtgttgg
     4321 caaagaaatt ttgaaagtgg aagtcgcatc ataaaaacgg cgaatataat ctaagcggct
     4381 tgctgttgga tacttagaaa ataaacaggc agctacgagt aaatacaaaa attgagccga
     4441 ttcataaatc tctccgctaa cacgattctg cactaaatat tttccttcca actgctttac
     4501 tgctgcatag gaaaacgtca tatcccgcca gtgatcaata aatccattca ttgtctccca
     4561 ttcttcgggc gtatagtcgc tcagcaagtc tgcatcatat ttacctagcg caactaattt
     4621 tttaacgtgc tcatataaat gcggtggctc aaattgtcca taagcttttt tgcgtaagtg
     4681 gaaaatcgcc aagcgtgcgg ctaaatattg ataatctggc gtatccttag tgattagatc
     4741 agctgcagcc ttgataatag tttcatgaat atctgaagtg cgaatacctt cataaaattg
     4801 aatgtgagaa cggagttcta cttgtgaaac agaaacattc tctaaccctt ctgccgccca
     4861 agtaatcaca cgatgaattt tatctagatt gagttgctcg cgcgtgccat tacgctttgt
     4921 taccattaaa cttttattca taattattaa ccctttata
//
LOCUS       DANLZQ010000138         4921 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.139, whole genome shotgun sequence.
ACCESSION   DANLZQ010000138 DANLZQ010000000
VERSION     DANLZQ010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4921)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4921)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4921
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.139"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(47..832)
                     /gene="znuB"
                     /locus_tag="PXE50_002425"
     CDS             complement(47..832)
                     /gene="znuB"
                     /locus_tag="PXE50_002425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005724066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter permease subunit ZnuB"
                     /protein_id="HDL5623276.1"
                     /translation="MFDILFPAWLAGVLLAFITAPLGAFVVWRKMAYFGDTLSHSALL
                     GVALGIFLELDPYLAVIGMTILLALLLVWLEQKTNYSVDTVLGIIAHTSLSLGVITIS
                     LLDNVRVDLMSYLFGDLLAINFSDVVFIGIGATLICLILMLFWKRLLSITISPELAQI
                     EGLNVARLRLLLMILTALTIALSMKFVGALIITSLLIIPSATARRFAKTPEKMVLIAI
                     FFSIIAVSGGLLLSSWKDTPAGPSVVICAGLIFLLSLFKKEYH"
     gene            complement(919..2256)
                     /locus_tag="PXE50_002426"
     CDS             complement(919..2256)
                     /locus_tag="PXE50_002426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000067755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HDL5623277.1"
                     /translation="MSSLSFDFSEDFRPLAAKMRPRNLAEYVGQSHLIGEGKPLRRAI
                     EAGHSHSMIFWGPPGTGKTTLAEIIAHHLDAEVERISAVTSGVKEIREVIEQAKLNRQ
                     AGRRTLLFVDEVHRFNKSQQDAFLPHIEDGTIIFIGATTENPSFELNNALLSRARIYI
                     LKPLQAVEILKILQMAIADTERGLGNETLVLEDDVLALLADYVNGDARFALNCLELMV
                     DMAQDSAKGKVLNKSLLTEVLGERQARFDKGGDRYYDLISALHKSIRGSSADGALYWY
                     ARILTAGGDPLYVARRLLAIASEDIGNADPRAMQIAIVAWDCFTRVGAYEGERAIAQA
                     IIYLAVAPKSNAVYQAFNEAKRLAKEAKDYDVPAHLRNAPTQLMKSLGYGEEYRYAHN
                     EPNAYAAGENYFPPELKDTEFYFPSERGMEKQIKEKMAWLKAQDQASPIQRYK"
     gene            complement(2266..2754)
                     /gene="mreD"
                     /locus_tag="PXE50_002427"
     CDS             complement(2266..2754)
                     /gene="mreD"
                     /locus_tag="PXE50_002427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HDL5623278.1"
                     /translation="MRTNPIFQILVIIAIFVVAFVLEIMPWPVGFQGLRPTWVVLVLI
                     YWALALPDKMSVGTAFIAGIVWDLILGSILGIHALVLSVAIYFVAKYHLILRNLSLWL
                     QSLLVMAYIVLIRFFIFVIEYILHSAEFNSQELLGAVISGVLWSWIFLLMRHIRRQLR
                     LR"
     gene            complement(2754..3809)
                     /gene="mreC"
                     /locus_tag="PXE50_002428"
     CDS             complement(2754..3809)
                     /gene="mreC"
                     /locus_tag="PXE50_002428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HDL5623279.1"
                     /translation="MKPIFAKAPSLGMRLIIAVIFSIMLIISDGRSSLMIQARNLLET
                     AVSGLYYFANTPRSILDGVSGNFIDNNKLQLENNLLKEQLREKSADLLLLDQLKVENQ
                     RLRLLLSSPLRQDEYKKIAEVLAAEMDAYRQQVVINQGRLDGAFVGQPIIDERGVVGQ
                     VISVGEKSSRVLLLSDITHAIPVQVLRNDVRGIASGTGVNNELVIDNLPRSIDVVKGD
                     VLVTSGLGGRFPEGYPVAIVETVENDTKSQFARIVARPLASFDRLRYLLLLWPTAEEK
                     NYSQSLSPAQVREVVEERRNSVNPFERLKQMSNKKTEVQLEAKEEQIENDEINENPAA
                     QPEAENEQNYHTEEGAE"
     gene            complement(3911..>4921)
                     /locus_tag="PXE50_002429"
     CDS             complement(3911..>4921)
                     /locus_tag="PXE50_002429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HDL5623280.1"
                     /translation="IDLGTANTLVYVKGQGIVLDEPSVVAVRQDRMGSLKSIAAVGSH
                     AKLMLGRTPKSIMAIRPMKDGVIADFFVTEKMLQHFIKQVHSNNFMRPSPRVLVCVPA
                     GATQVERRAIKESAIGAGAREVYLIEEPMAAAIGAGLPVHEAMGSMVIDIGGGTTEVA
                     VLSLNGIVYSTSVRIGGDKLDEAIIAYVRRHFGSAIGEATAERIKQEIASAKIESDDD
                     VKTMEVHGHNLAEGAPRTFELNSRHVLEAIEQPLNGIVEAVKSVLEQCPPELAADIFE
                     RGMVLTGGGALLHNLDRLLSDSTGVQVVVAEDPLTCVARGGGKALEMIDMHGGDVFSI
                     DD"
BASE COUNT         1513 a         1172 c          871 g         1365 t
ORIGIN      
        1 ctctttacat aaaaatctta tgctttattt tcatacatta tgctgtttaa tggtattctt
       61 ttttgaatag cgataataga aaaatcaagc cggcacaaat gactaccgaa ggccctgctg
      121 gtgtatcttt ccaactggat aacaataaac cgccactgac tgcaataata ctgaagaaaa
      181 tcgcaatcaa caccattttt tcaggcgttt tagcaaagcg tcttgccgta gcagacggaa
      241 taatcagcag tgaggtaata attaaagcac cgacaaattt catacttaat gcgatagtta
      301 atgcggttaa aatcatcagc aataaacgta agcgagccac atttaatcct tcaatttgag
      361 caagttccgg gctgatggta atcgacaaca accgcttcca aaacagcatt aaaatcaaac
      421 aaattagggt tgctccgatt ccgataaaca ccacatcaga aaaattaatt gccagtaaat
      481 cgccgaataa gtaagacatc aaatccactc gtacattatc caacaaacta atggtaatta
      541 ccccgagaga aaggctagta tgggcgataa tccccaacac ggtatccacc gaataattgg
      601 ttttttgctc caaccaaacc agcaataatg caagaagaat agtcattcca attacagcaa
      661 gatacggatc gagttctaaa aaaatcccta atgccacgcc gagcaatgca gagtgcgaaa
      721 gtgtgtcgcc gaaatacgcc atttttcgcc acaccacaaa agcccctaga ggtgcggtaa
      781 taaaggctaa caaaacaccg gcaagccaag ccggaaataa aatatcaaac atattggttc
      841 tcaaaggcaa gtaaaacaag cggttatttt ttcggaaaaa tttgcaaatt ttttgctgat
      901 ttagaccgct tgtcatattt atttataacg ttgaatcggg ctggcttgat cctgtgcttt
      961 cagccacgcc attttttctt taatctgttt ttccattccc cgctcacttg ggaagtagaa
     1021 ttcggtatct ttcagctcag gcgggaaata attctccccg gcggcataag cgtttggctc
     1081 attgtgggca tagcgatact cttcgccata gcctaaagat ttcattaatt gagtgggagc
     1141 attacgcaaa tgcgccggca catcgtagtc ttttgcctct ttagcgaggc gctttgcttc
     1201 attaaaagct tgatagaccg cattgctctt tggggcaact gccaaataaa tgatcgcttg
     1261 ggcaatcgct ctttcacctt cataagcccc cactcgggta aagcaatccc aagccacaat
     1321 cgcaatttgc attgctcgag ggtcggcatt accaatatct tcagaagcaa tcgcaagcag
     1381 ccttcttgcc acataaagcg gatcaccacc ggcggttaaa attcgggcat accagtataa
     1441 tgctccatca gccgatgagc ctcgaatgga tttatgtaac gcagaaatga gatcatagta
     1501 acgatcaccg cctttatcaa aacgagcttg tcgttcgcct aacacttcgg tcagcaaact
     1561 tttattcagc actttccctt tagctgaatc ttgtgccata tctaccatta attccaaaca
     1621 gttcaaggca aaacgggcat caccattaac ataatcagca agcaatgcca gtacatcatc
     1681 ttcaagtacc aaagtttcat tgcctaaacc acgttcggta tcggctatcg ccatttgcaa
     1741 aatttttaga atttcgaccg cttgtaacgg ctttaaaata taaattctgg ctcgggaaag
     1801 cagtgcgtta tttagctcaa aagagggatt ttcggtagtc gcaccaataa aaataatagt
     1861 gccgtcctca atatgcggta aaaacgcatc ttgctggctt ttgttaaagc ggtgaacttc
     1921 atccacaaaa agcaacgttc gtctgccggc ttggcggttt aatttggctt gttcaatcac
     1981 ctctcggatc tcttttacac cgctggtcac agcggaaata cgttcaactt ccgcatcaag
     2041 atgatgggcg ataatttcag ctagggtcgt ttttccggtg ccgggcggtc cccaaaaaat
     2101 catagaatga ctatgtccgg cttcaatcgc tctgcgtaac ggtttgcctt cgccaattaa
     2161 atgagattgc ccgacatatt cagccaagtt tcgaggtcgc attttggctg caagcggtcg
     2221 aaaatcttca ctaaaatcaa aagacaaact actcatttta acctcttaac gtaaccgcag
     2281 ttggcgacga atatgacgca ttaataagaa aatccaagac caaagcacac cactgattac
     2341 agcacctaac aattcctgtg aattaaattc ggcactgtgt aaaatgtatt caatcacgaa
     2401 aataaagaaa cggatcagca caatatatgc cattactaat aggctttgta gccatagcga
     2461 taagtttcgc agaatcagat ggtatttcgc aacaaaataa atcgccaccg ataacactaa
     2521 ggcgtggatg cctaaaatcg agccaagaat cagatcccag acgatgccgg caataaaagc
     2581 cgtccccaca ctcattttat caggtaatgc caatgcccaa taaattaaca ccaaaacgac
     2641 ccaagtaggg cgtagccctt ggaatcctac cggccaaggc ataatctcaa gtacaaaagc
     2701 aaccacaaaa atcgcaatta tcacaaggat ctgaaaaatc gggtttgttc tcattattcc
     2761 gctccttctt ccgtatgata gttttgttca ttttccgctt ctggttgtgc tgccggattc
     2821 tcatttatct catcattctc tatttgttct tcttttgcct ctagctgcac ttcagttttc
     2881 ttgttagaca tctgttttaa acgttcaaat ggattcacgc tattacgtct ttcttcaaca
     2941 acttcacgta cttgcgctgg cgacaagctt tgggagtagt ttttctcttc cgccgtcggc
     3001 caaagcagta ataagtaacg taagcgatca aatgaggcta acggacgagc aacaattctg
     3061 gcaaattgac ttttggtatc attttcaacc gtttctacaa tcgccaccgg atatccctca
     3121 gggaaacgtc cacctaagcc tgaagtcacc agcacatcac cttttaccac atcaatagaa
     3181 cgaggcaagt tatcaatgac caattcatta ttcacccctg taccactggc aatgccacgt
     3241 acatcattgc gtagcacttg aacaggaata gcatgagtaa tatcagagag caataaaaca
     3301 cggctagatt tttcccctac agaaataact tgtccaacaa cacctctttc atcaataata
     3361 ggttgcccga caaaagcacc gtctaaacgc ccttgattaa tcactacttg ctgacgataa
     3421 gcatccatct cagcagctaa tacttcagca atttttttat actcatcttg ccgaagcgga
     3481 gaactcaata acaatcttaa acgctgattt tcaaccttta gctgatcaag caataataaa
     3541 tcggcacttt tttctcttag ctgctctttt aataaattat tctcaagctg taatttatta
     3601 ttatcaataa aattgccact taccccatct aaaattgaac ggggggtatt agcaaaataa
     3661 tataatccac ttaccgcggt ttctaataga ttacgcgctt gaatcattaa agagctacgc
     3721 ccatcggaaa taatcagcat aatagaaaat atcactgcga taatcaggcg catccctaaa
     3781 gagggagctt tagcaaaaat aggtttcatt agagaaatat atgtgaattt attgggaatc
     3841 tataacgaaa attgacaata gaatcaatcc attgccaacc tccatttaaa cagctgctaa
     3901 gagaaatgta ttaatcatca atactaaata catcaccacc gtgcatatcg atcatttcta
     3961 atgctttacc accaccacga gctacacaag ttaatggatc ttctgctact acgacttgca
     4021 cgccagttga atcagaaagt aaacgatcta aattatgtaa taatgcacca cctcctgtta
     4081 acaccatacc gcgctcaaaa atgtctgctg ccaattcagg tgggcattgc tctaagactg
     4141 atttaactgc ctctacaata ccatttaatg gttgttcaat tgcttctaat acatgtcttg
     4201 agttaagctc gaaagtacga ggagcgcctt cagctaaatt gtgtccgtgt acttccattg
     4261 ttttaacatc atcatcggat tcaatcttag cactagcaat ttcttgttta attcgctctg
     4321 ccgttgcttc accaatagca gaaccaaaat gacgacgtac ataagcaata atagcttcat
     4381 ctaacttatc accaccaata cgcacagaag ttgaatacac aatgccgttt aaagaaagca
     4441 ctgccacttc ggttgtaccg ccaccaatgt caattaccat tgaccccatt gcttcgtgaa
     4501 ccggcaaacc tgcaccgatt gcagccgcca ttggctcttc aattaaatag acttcacgcg
     4561 ctcctgctcc aattgcagat tctttaattg cacggcgttc cacttgtgtt gcacctgctg
     4621 gcacgcacac taatacacga gggcttgggc gcataaagtt attactatgt acttgtttaa
     4681 taaagtgttg caacattttt tctgttacaa aaaaatccgc aatgacacca tctttcattg
     4741 gacgaatcgc cattatgctt tttggtgtac ggcctagcat taattttgca tgtgagccta
     4801 ccgccgcaat actttttagc gatcccatac gatcttgacg tacagcaacc actgagggtt
     4861 catctagcac aataccttga cctttaacat aaaccagtgt atttgctgtc ccgagatcga
     4921 t
//
LOCUS       DANLZQ010000139         4836 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.140, whole genome shotgun sequence.
ACCESSION   DANLZQ010000139 DANLZQ010000000
VERSION     DANLZQ010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4836)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4836)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4836
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.140"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(42..608)
                     /locus_tag="PXE50_002430"
     CDS             complement(42..608)
                     /locus_tag="PXE50_002430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623281.1"
                     /translation="MEGLIMGLQLIPHFPELAISRRTYLHDMPMYCFVSKNWIFSAKD
                     RAKREALGNLLACGGEMMKSFIFKRSLFSEIWFEDILLEDEEKELIRILYNKPEPEYQ
                     VEEKIDWEAREARRKQADYDKWQSYDERNPFHYQIFPTDTIAYAQQQVEKFIEDVDNF
                     LEWFYDDEVKRYILERNEIYQKKFDLVN"
     gene            complement(1141..1467)
                     /locus_tag="PXE50_002431"
     CDS             complement(1141..1467)
                     /locus_tag="PXE50_002431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5623282.1"
                     /translation="MLHSKGKILPKITLNEIETKERFAIALRKEMHAQYWTGKMVANA
                     LDVSEKTVKDWVAGKRLPSSLDLLALMRISSCVRQLVWDISKSEECYQDAEMLKQICF
                     VLLSNL"
     gene            1515..3146
                     /locus_tag="PXE50_002432"
     CDS             1515..3146
                     /locus_tag="PXE50_002432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HDL5623283.1"
                     /translation="MVTRTKNQPKNQAVSYIRMSTEHQEFSPDLQRCFIENYAKENGL
                     EIIREYIDEGKSGLTAEHRPQFLSMIQLVQSGQADFDHILVYDVSRWGRFMNIDESGH
                     YELICTYQGIKVHYCAEPFKGNDIASQIYKTMKRLSVGDYCRELGVKVFNGQKNLIQH
                     GFRQGGVAGFGLRRRLIDCQGNPKFDLQRGDRKSLQTDRVILVAGPKEEQEIVRQIYH
                     DFVYQHKTEQQIADSLNAQGIVTDRNTAWTKGVVHQILINEKYVGHNVWNKRSASKTR
                     EYKGKNPVEEWVRAENVFEAIVPQALFNAAQTIIHQRSARLSDDEMLEQLKLLLKEKG
                     KLSGLIIDEAENCPSSSAYSSRFGSLLNTYTLINYEPERDYHYVEINRLLRQQHKNFV
                     QQTLDTIIELGGVVLSDDVTDLVHINNEFTASIVLSRCRLTPSGSKRWLIRFDTSLNP
                     DITIAVRINESATEILDYYLLPTTEKVNEKLRLAESNPAELEIYRHDNLDRFFIMVER
                     ILVKEFIYAKRHHSNSSYRQNSGTQSQNAQSESLC"
     gene            3061..3954
                     /locus_tag="PXE50_002433"
     CDS             3061..3954
                     /locus_tag="PXE50_002433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HDL5623284.1"
                     /translation="MQNDTIQILPIDKIRVLNPRTRNQKVFADLVENIATIGLKRPIT
                     VTPSVDSAEYYDLLCGQGRLEACQVLGELFIPCRVVNANSEESYLISLVENIARRQHS
                     YMELLSGIKILNDRGYKPVDIARKIGFSKSHVNSILHLINAGEERLINAVEQGILPIT
                     IAISISRSDDQEVQKQLAELYTNGTLKSTDIAKIRNLIHRRNLAGKKANTGISGSIRS
                     SIYNPKTVVNIYKEETERQKMMIKQADYDEKQLSIILSCLNKLFEDKYFQLVLKSEHL
                     DDMPKDLSQRMLKQREGNIYA"
     gene            3947..4810
                     /locus_tag="PXE50_002434"
     CDS             3947..4810
                     /locus_tag="PXE50_002434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HDL5623285.1"
                     /translation="MPKHITYAFHNQLISLPIDEIIPLKKMDKNFEKSTKFQSILASI
                     REIGIVEPVVVYPEENNQYILLDGHSRVHALKKLGVDKVLCMISTDDEGFTYNKQINR
                     LTAVQENKMLMKTIERGVSDELIARTLNINLKALRQKMNMLNGITREVVDILANKQVS
                     KEIFRILRKMKPERQIEVAQMMIASNKFTLTYANMMLLSSRKEELVESHKSKTTNDDL
                     TDLSIMQKELERLKENYKISEEKLADLKMGLVVAKGYVKKLLNNAAVVDLLENDQSEI
                     YLTLKEVCDIQ"
BASE COUNT         1591 a          926 c          936 g         1383 t
ORIGIN      
        1 aagtcggcaa taacattatt ttataataac taatgtgaat tctagttcac taaatcgaat
       61 ttcttttggt aaatctcatt cctttctaat atatagcgtt ttacctcatc atcgtaaaac
      121 cattcaagaa agttatcaac atcttcaatg aacttttcta cctgttgctg tgcatatgct
      181 atcgtatcgg tagggaagat ttgataatga aacggattgc gttcatcata actctgccat
      241 ttgtcataat cggcttgttt acgccgcgct tctcttgcct cccagtcgat tttttcttcc
      301 acttgatatt ctggctctgg cttattatac aaaatacgga tgagttcctt ttcttcatcc
      361 tcaagcagaa tatcttcaaa ccagatttca gaaaataggc tgcgcttgaa aatgaaagac
      421 ttcatcattt cccctccaca cgccaataag tttcccaatg cttcccgttt cgctctatct
      481 tttgccgaaa atatccagtt tttcgataca aaacagtaca ttggcatgtc atgcaaatag
      541 gttcttcgtg aaatggctaa ttcaggaaaa tgaggaataa gctgtaaccc cattattaag
      601 ccttccatac tgcacacgat cttacttaat tgtccgtaat cgcgtaaaaa agcaatgtca
      661 gtttttatca accacaacga taggctgact aatatgaaca taaagatgag ataatagatc
      721 ggttttaagg ctaaggcgcg ccgacaaagc cacattaaga gtggaatcgt aacgagatca
      781 aagaaaaatg atgagtctat gatgatttcc ttatgtgagt tgatgaataa tcaggcatga
      841 aggaaacctt aaaaaggaaa agtcccttca ttaccacttt ttaaaacctt ttaaggctta
      901 aaaatcaaaa gtcgtaatga agggactatt gtccgtgggc aaaaaggtat tagttatagg
      961 gggctttgtc aagcgaaaat ttactgtgca ttttctcgcc aaaactgatt taagccttga
     1021 taaaatctcg aaagtacctt gtcaagaaaa atctttttag tggtttgatt gctagttttt
     1081 tgagcaaaac tatgctgtaa tgcagtaaaa atacagtttc tatctgtgtt tggaatccag
     1141 ttacaaattg gagagtaata caaagcatat ttgcttgagc atctcagcat cttggtagca
     1201 ttcttctgat tttgaaatat cccaaacaag ctgccgtaca catgatgaaa ttctcattaa
     1261 cgccaataaa tctaggctac ttggcaatct tttccctgca acccaatctt taactgtttt
     1321 ctcactcaca tctaatgcat tggcgaccat tttccccgtc caatattgag catgcatttc
     1381 ctttcgtaac gcaattgcaa accgctcttt cgtttcaatc tcattgagtg taattttggg
     1441 taagatttta ccctttgagt gcaacatatt tcctcccgat tcctttatat tggtgtagat
     1501 aaggagtcat tagaatggtt acacgtacaa agaatcaacc taaaaatcag gcggtttcct
     1561 acattcgaat gtcaacggaa caccaagaat tttcaccaga ccttcaacgt tgctttatcg
     1621 aaaattatgc taaagaaaat gggctagaaa tcattagaga atacattgat gaaggaaaaa
     1681 gtgggctaac cgcagaacac cgcccacaat tcctttcaat gatacaactc gtacaaagtg
     1741 gacaagccga cttcgatcat attttggtgt atgacgtgag tcgttggggt cggtttatga
     1801 atattgatga atcggggcat tatgaactga tttgtaccta ccaaggcatt aaagtccact
     1861 attgcgccga gccattcaaa gggaatgata ttgcctctca aatatataaa accatgaaac
     1921 gtttgtcggt aggagactac tgtcgtgaac tcggagtgaa agtatttaac ggtcaaaaaa
     1981 atctgatcca acatggattt agacaaggtg gggtagctgg atttggattg cgtaggagat
     2041 tgattgactg tcaaggaaac cctaaatttg atctccaacg tggagataga aagagcctac
     2101 aaaccgacag agtgattttg gttgcaggcc caaaggaaga gcaggaaatt gtccgacaaa
     2161 tttaccatga ttttgtttat caacataaaa cggaacaaca aattgctgat agcttaaatg
     2221 cacaaggcat tgttactgat agaaatacag catggacgaa aggcgtagta catcaaatcc
     2281 ttattaacga aaagtatgtc ggccacaatg tttggaataa acgtagtgca tcaaaaacac
     2341 gcgaatataa aggtaaaaac cccgtagaag agtgggtgcg agctgagaat gtatttgaag
     2401 ctatcgtgcc acaagcctta tttaatgcag cccaaaccat tattcatcaa cgctccgccc
     2461 gattatctga cgatgaaatg ttagagcaac tcaagctact tttgaaagag aaagggaagc
     2521 tgtctggctt gatcattgat gaagccgaaa attgtccatc aagtagcgcg tacagtagcc
     2581 gatttggaag cctacttaac acatatactt taattaacta tgaacccgaa cgggattacc
     2641 actatgtaga gatcaaccga ttactccgtc agcagcataa aaatttcgta caacaaacac
     2701 ttgataccat tattgaattg gggggagtgg ttttgagcga tgatgtaacc gatttagtcc
     2761 acatcaataa tgaatttacc gcctcaatcg tattaagtcg ttgtcgccta acgccatcag
     2821 gaagcaaaag atggttgatc cgatttgata ccagtttaaa tcccgacata acaattgcag
     2881 tgcgcatcaa tgagagtgcc acagaaattc ttgattacta cctgcttccc acaactgaaa
     2941 aggtaaatga aaaactacga ttggctgaga gtaatcctgc cgaacttgaa atctaccgcc
     3001 atgataattt agatcgcttt tttattatgg ttgaacgtat tttagtcaag gagtttatct
     3061 atgcaaaacg acaccattca aattcttcct atcgacaaaa ttcgggtact caatcccaga
     3121 acgcgcaatc agaaagtctt tgctgatctg gtcgaaaaca ttgcaacgat tggtctcaag
     3181 agacctatta ccgtaacgcc atctgtcgat agtgctgaat attatgattt gttatgcggt
     3241 caaggtcggc ttgaggcttg tcaggtgctt ggtgagctat tcataccttg tcgcgttgtg
     3301 aacgcaaata gtgaagaaag ctacttgatc agccttgtgg aaaatattgc cagacgtcag
     3361 cattcctata tggagctgct ttcaggcatc aaaatactca atgatagagg ttataagccc
     3421 gttgatattg ctcgcaaaat cggtttctca aaaagccatg tcaacagtat cttacacctc
     3481 atcaatgctg gggaagagcg ccttatcaat gcggtagagc aaggaatttt acccattacc
     3541 atcgctattt cgatttctcg ttcagacgat caggaagttc aaaaacaact cgcggaactt
     3601 tacaccaatg gtacattgaa aagcaccgat attgccaaaa tacgtaacct gatccaccgt
     3661 agaaatcttg ctggtaagaa agccaataca ggtatttctg gaagtattag atcatctatt
     3721 tataatccca aaactgtggt gaatatctac aaagaggaaa cggaaagaca gaaaatgatg
     3781 atcaagcaag cggactatga tgaaaaacaa ctctctatta tcttgtcttg cttaaataaa
     3841 ctctttgagg acaaatactt tcaactcgtc cttaaatcag aacatttaga cgatatgcca
     3901 aaagatttaa gccaacgaat gttaaaacaa cgagagggaa atatttatgc ctaaacatat
     3961 tacttatgcc tttcataatc agttaatttc gcttccaatt gatgagatta ttccattaaa
     4021 aaagatggat aaaaattttg agaaaagcac taagttccaa agcattctgg cttcaattcg
     4081 tgaaatcggg attgttgaac ctgtggtcgt ctatccagaa gaaaacaacc aatatatttt
     4141 gttagatggc cattctcgtg tacatgcact caaaaagcta ggtgtggata aggtgctttg
     4201 tatgatttct accgatgatg aaggctttac ttacaacaag caaattaacc gcttaaccgc
     4261 cgttcaggaa aataaaatgc tgatgaaaac cattgagcgc ggggtttcgg atgaactgat
     4321 cgcaagaaca ctcaatatca atctaaaagc actacggcag aaaatgaata tgcttaatgg
     4381 gatcacaaga gaggttgttg atatattggc caataagcag gtcagtaaag agatatttcg
     4441 gattttgcgc aagatgaagc ctgaacgcca aattgaagtg gcacaaatga tgatcgccag
     4501 taataagttt acattgacat acgccaatat gatgttgctc agttcacgca aggaggaatt
     4561 agtcgaaagc cacaagtcta aaaccacgaa tgatgattta accgatcttt ccattatgca
     4621 aaaagagcta gagcgactta aagagaacta taaaatttcc gaagagaaat tggcggactt
     4681 aaaaatggga ttggttgtgg cgaaagggta tgtcaaaaaa ctattgaata atgctgccgt
     4741 ggtagatttg cttgaaaatg atcagagtga aatctatctt actcttaaag aagtatgtga
     4801 tattcaataa tataatatct agctaataac cttaat
//
LOCUS       DANLZQ010000140         4826 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.141, whole genome shotgun sequence.
ACCESSION   DANLZQ010000140 DANLZQ010000000
VERSION     DANLZQ010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4826)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4826)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4826
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.141"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            25..483
                     /locus_tag="PXE50_002435"
     CDS             25..483
                     /locus_tag="PXE50_002435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein CcmH"
                     /protein_id="HDL5623286.1"
                     /translation="MLLSVTVNAAPVELHQFDSPKQESDYRALIQELRCPQCQNNNIA
                     DSNATIATDMRAKTLELLKQGKSKDEVVDYMIERYGNFVTYDPPLTPATIMLWLLPLI
                     LIALGLGVVLRRKKNKPQAVNFEQNTAKPTTHLAQDEQERLNQILNKEEK"
     gene            480..1391
                     /gene="ccmI"
                     /locus_tag="PXE50_002436"
     CDS             480..1391
                     /gene="ccmI"
                     /locus_tag="PXE50_002436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcmI"
                     /protein_id="HDL5623287.1"
                     /translation="MNFWLAIIFVTLIVCGVAFYPLLKKNKQIDNTKRDSLNKAFYFD
                     RLKEVENEANEGVIDDPEQTKLELQKNLLDDIPHSTQSATSEKLTLGKSWFVALILFV
                     GGISFAIYSNVGSWFSNSMLDTTHQKLDSFYERLKTEETNPLSQEEMNQFAMALRVDL
                     QSNPNDDKKWYMLGQIGMALDDGQLAHDAFSKAAQLKPDNLDYKLSHAQLLLFSEAQE
                     DKKQGETLLKEIIRQDHTNFNALSLLAFHSFEKEDFKMAAMTWGMMLKLLPDEDPSKV
                     TVERSFNMALSNLSEAEKQELQKGEKK"
     gene            1388..1993
                     /gene="mog"
                     /locus_tag="PXE50_002437"
     CDS             1388..1993
                     /gene="mog"
                     /locus_tag="PXE50_002437"
                     /EC_number="2.7.7.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin adenylyltransferase"
                     /protein_id="HDL5623288.1"
                     /translation="MTACKPLSKEKLKIGLVSVSDRASQGVYSDQGIPELRAWLESAL
                     TEPFELETRLIPDEQAIIEQTLIELVDAHACHLVLTTGGTGPAKRDVTPDATLAVAHR
                     EMPGFGEQMRQVSLHFVPTAILSRQVGVIRHDSLILNLPGQPKAIKETLEGVKDEQGK
                     VLVKGIFSAVPYCLQLLSEIYVETHAAICESFRPKSARREN"
     gene            2003..2341
                     /gene="glnB"
                     /locus_tag="PXE50_002438"
     CDS             2003..2341
                     /gene="glnB"
                     /locus_tag="PXE50_002438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005654045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulatory protein P-II"
                     /protein_id="HDL5623289.1"
                     /translation="MKKIEAIIKPFKLDDVREALTDVGVSGMSITEIKGFGRQKGHTE
                     LYRGAEYAIDFLPKVKVEIVIPDELEEQCIEAIMETAQTGKIGDGKIFVYDVGRVIRI
                     RTGEENEEAI"
     gene            2422..2901
                     /gene="lspA"
                     /locus_tag="PXE50_002439"
     CDS             2422..2901
                     /gene="lspA"
                     /locus_tag="PXE50_002439"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005724521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HDL5623290.1"
                     /translation="MKTGLKFLWVSLIVIIIDLWSKYIVVQHFEFGESINILPIFNFT
                     YARNYGAAFSFLADHSGWQKYFFLGLAVVISSALVVALWKNQAVKKLENIAYALIIGG
                     AIGNAIDRAYNGYVVDFLHFYWDIYHYPVFNIADIAICVGAGLLILEAFITKKEPKK"
     gene            2912..3856
                     /gene="ispH"
                     /locus_tag="PXE50_002440"
                     /gene_synonym="lytB"
     CDS             2912..3856
                     /gene="ispH"
                     /locus_tag="PXE50_002440"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HDL5623291.1"
                     /translation="MKILLANPRGFCAGVDRAISIVELALEIHGAPIYVRHEVVHNKF
                     VVDGLKAKGAIFVEELHEVPDDAIVIFSAHGVSQVVRQEAKNRGLKVFDATCPLVTKV
                     HMQVARASKKGTKAILIGHEGHPEVIGTMGQYNNQEGGIYLVESVEDIANLPVSNNDE
                     LTFMTQTTLSIDDTIGVIEALKEKYPAIQGPRKNDICYATTNRQHAVRELAEQSQLVL
                     VVGSKNSSNSNRLAELASRMGVMSKLIDGPQDIDPTWLEGIETIGITAGASAPEVLVQ
                     SVISHLKTLGVTEVETLVGNEEDVVFEVPKELRIKEVK"
     gene            3856..4104
                     /locus_tag="PXE50_002441"
     CDS             3856..4104
                     /locus_tag="PXE50_002441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HDL5623292.1"
                     /translation="MTEINRFKLEWACRRGMRELDKMIMPFYQNHFNELNETQQQAFV
                     EMLNYSDPELFRWVMLQAPAPTEEIAELIRLMRDKIET"
     gene            complement(4311..>4826)
                     /locus_tag="PXE50_002442"
     CDS             complement(4311..>4826)
                     /locus_tag="PXE50_002442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDL5623293.1"
                     /translation="SANQYIFNSDWFTHNVPSLASIFEYVKPRRILEIGSFEGRSSVF
                     FIEEALKYQSQVEIHCIDSWEGGAEHQGVWDMGEIEQRFIHNVTLAQQKFQNVVLYKH
                     RGYSHQKMIELLANGYINYFDYIYIDGSHEAPDVLFDALLAHRLVRKGGVISFDDYLW
                     SPDETGKQRHY"
BASE COUNT         1522 a          976 c         1042 g         1286 t
ORIGIN      
        1 aaaataaaaa ctctcagcct aataatgctt ctaagtgtaa cagttaatgc tgctccggta
       61 gaactgcacc aattcgacag cccgaaacaa gagtcggact atcgtgcctt aattcaagaa
      121 ctgcgttgcc cgcagtgtca aaataataat atcgccgatt ccaatgcgac tattgccacc
      181 gatatgcggg caaaaacctt agaattgctc aaacaaggca aaagcaaaga cgaagtggtg
      241 gattatatga ttgaacgcta cggcaatttc gtcacttacg acccgcctct cacaccggca
      301 accattatgt tatggctgtt gccgttaatt ttaattgcct tagggctggg ggtggtgttg
      361 cgtagaaaga aaaacaaacc acaagcggtc aattttgagc aaaatactgc aaaaccgacc
      421 actcatctcg ctcaagatga gcaagaacgt cttaaccaaa ttctcaataa ggaagaaaaa
      481 tgaatttctg gctggcaatt attttcgtta cactgattgt atgtggcgtg gcgttttatc
      541 cgttacttaa aaagaacaag caaatcgata acaccaagcg agacagctta aacaaagcct
      601 tctattttga ccgcttaaaa gaagtggaaa acgaagcgaa tgaaggggtg attgatgacc
      661 ctgaacaaac caaattagag ctacaaaaaa acttgcttga tgatattcca cacagcacac
      721 aaagtgccac aagtgaaaaa ttaacgctcg gcaagtcgtg gtttgtggca ttgattttat
      781 ttgtcggcgg tatcagcttt gcgatttaca gcaatgtcgg ttcttggttc tccaactcaa
      841 tgttagacac cactcaccaa aaattagaca gcttctatga gcgtttaaaa accgaagaga
      901 ccaatccgct ctcacaagag gaaatgaacc aatttgcgat ggcattacgg gtagatttac
      961 aaagtaatcc gaatgacgac aaaaaatggt atatgctcgg tcaaatcggg atggcgttag
     1021 atgatggtca gcttgcacac gatgccttta gcaaagcggc tcaactcaag ccggataact
     1081 tagattacaa actcagccac gcccaactgc tgctcttttc cgaagcacag gaagacaaaa
     1141 aacagggtga aaccttgtta aaagagatta tccgccaaga ccacacaaac tttaatgcgt
     1201 taagtttatt ggcgttccac tcctttgaaa aagaagattt caaaatggcg gcaatgacgt
     1261 ggggaatgat gttaaaacta ctgcctgatg aagatcctag caaagtaacg gtagaacgca
     1321 gttttaatat ggcgttatcc aatttaagtg aggcggaaaa acaagaattg caaaaaggtg
     1381 agaaaaaatg accgcttgta aaccacttag caaagagaag ttgaaaatcg gcttggtgtc
     1441 ggtttcagac cgagcctcgc agggggttta ttcagaccaa ggcattcccg aattaagggc
     1501 gtggcttgaa tctgccttaa ccgagccgtt tgagctggaa acccgcttaa ttcccgatga
     1561 gcaagccatt attgagcaaa ccttaatcga gttagtcgat gctcacgctt gccatttggt
     1621 attaaccacc ggcggcaccg gcccggcaaa acgtgatgtc accccagatg ccacccttgc
     1681 tgtcgcccac cgagaaatgc ccggctttgg cgaacagatg cgacaagtga gccttcactt
     1741 cgtgccaacc gccattctct ctcgccaagt gggagtaatt cgccacgaca gtctgatttt
     1801 aaatctgccg gggcaaccga aagcaattaa agaaacgctg gaaggtgtga aagatgaaca
     1861 gggcaaagta ttggttaaag gtatttttag tgccgtgcca tactgtttac aacttttaag
     1921 cgaaatttat gtcgaaaccc acgcagctat ttgcgaaagt ttcagaccca aatcggcaag
     1981 acgagaaaat taaggctaaa aaatgaaaaa aatagaagca attattaaac cttttaaatt
     2041 agacgatgtg cgtgaagcct taaccgatgt gggtgtcagc ggaatgagta ttaccgaaat
     2101 caaagggttt ggcagacaaa aaggacatac cgagctttat cgtggggcgg aatatgcgat
     2161 tgattttcta ccgaaagtga aagtcgaaat cgtgattccc gacgagttgg aagaacagtg
     2221 cattgaagca attatggaaa ccgcccaaac cggcaaaatc ggcgatggca agatttttgt
     2281 gtatgatgtc gggcgggtga tccgcattcg taccggcgaa gaaaatgaag aagcgattta
     2341 gttttgcaaa aaatccggca aaaacgaccg cttgcagggg gatttccatc tactcttttt
     2401 acattaaatt ttggatatta aatgaaaaca ggcttaaaat ttctttgggt gagtttaatt
     2461 gtaatcatca ttgacctttg gtcaaaatac attgtagtgc aacattttga atttggtgaa
     2521 agcattaata ttttgccgat ttttaacttc acttacgccc gaaactacgg ggctgccttt
     2581 agtttccttg ccgaccattc cggctggcaa aaatatttct ttttagggct ggcggtagtg
     2641 atttccagtg ctttagtggt ggctctttgg aagaatcaag cggtcaaaaa attagaaaat
     2701 attgcgtatg ccttaattat tggtggagcg attgggaatg ccattgaccg tgcttacaac
     2761 ggctatgtag ttgatttcct tcatttttat tgggatattt atcactaccc tgtgtttaat
     2821 attgccgata ttgcgatttg tgtgggtgca ggcttactga ttttagaagc ctttataacc
     2881 aaaaaagaac cgaaaaaata agagtgatta aatgaaaatt ttattagcaa acccacgcgg
     2941 tttttgtgcc ggcgtggatc gagccatttc gattgttgaa ttagccttag aaattcacgg
     3001 tgcacctatc tatgttcgcc acgaagtggt acataacaaa tttgtggtgg atggcttgaa
     3061 agccaaaggg gctatttttg ttgaggagct acacgaagtg ccggacgatg ctatcgtgat
     3121 cttctcagcc cacggggtgt cgcaagtagt tcgccaagaa gccaaaaatc gtggcttaaa
     3181 agtgtttgat gccacttgcc cactcgtgac caaagtgcat atgcaggttg cccgagccag
     3241 taaaaaaggg acaaaagcaa ttttaatcgg tcacgaaggt caccctgaag ttatcggcac
     3301 aatgggacaa tacaataacc aagaaggtgg catttatttg gtagaatcgg tggaagatat
     3361 tgccaacttg ccggtttcca acaacgatga attaactttt atgacgcaaa ccacactttc
     3421 cattgacgat accattggcg tgattgaggc gttaaaagag aaatatccgg caattcaagg
     3481 ccctcgcaaa aatgatattt gttatgctac caccaatcgc caacacgcag tgcgggaact
     3541 ggcagaacaa tcacaattag tgttagtggt aggttcaaaa aactcctcga actcaaatcg
     3601 tttggcggaa ctcgcctctc gaatgggtgt gatgtcaaaa ctgattgatg gtccgcaaga
     3661 tattgatcca acttggttgg agggtattga aactatcggt attaccgccg gtgcttccgc
     3721 tcctgaagtg ttggtgcaat cagtaatttc gcatttaaaa acccttggcg taaccgaagt
     3781 tgaaacctta gtcggcaacg aagaagacgt ggtgtttgaa gtcccgaaag agttacgcat
     3841 caaagaggta aaataatgac agaaatcaac cgctttaaat tagaatgggc gtgccgacgt
     3901 ggtatgcgtg agttagacaa aatgattatg ccgttttacc aaaatcattt taatgaactc
     3961 aatgaaaccc aacagcaagc tttcgttgaa atgctcaatt acagcgaccc ggaactgttt
     4021 cgctgggtaa tgctgcaagc acctgcccca accgaagaaa tcgctgaatt gattaggtta
     4081 atgcgagata aaattgagac ctagagctaa tagattaacc tcttctttgg ggtaaatata
     4141 tagctactta ccccaaagaa gactaaattc attcaacttt tacaaaataa ccctaaacta
     4201 gaaaagttaa tcttccaatt taataatatg ttgctgataa gctattaaac cttgtattac
     4261 atgcactttc tgctgatagg tattgacata gtgatcaaca gcgggtttta ctaataatga
     4321 cgctgtttac ctgtctcatc tggtgaccaa aggtaatcat caaaactaat aacgcctcct
     4381 tttctcacta aacgatgtgc aagtaaagca tcgaacaaca catctggcgc ttcgtgagat
     4441 ccatctatgt aaatatagtc aaaataattt atatatccat ttgcgagaag ttcaatcatt
     4501 ttttggtgag aatagccacg gtgcttatat aacacaacat tttggaattt ctgttgcgca
     4561 agagtgacat tatggataaa tcgttgttct atttctccca tgtcccaaac tccttgatgc
     4621 tctgctcccc cttcccaact atcaatacaa tgaatttcaa cttgtgattg atatttcaat
     4681 gcttcttcaa tgaaaaagac agatgatcta ccttcaaatg atccaatttc taaaatcctc
     4741 cgaggtttta catattcaaa aatagaagct aatgaaggaa cattatgagt aaaccaatca
     4801 gagttaaaaa tatattggtt ggctga
//
LOCUS       DANLZQ010000141         4573 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.142, whole genome shotgun sequence.
ACCESSION   DANLZQ010000141 DANLZQ010000000
VERSION     DANLZQ010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4573)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4573)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4573
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.142"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            112..441
                     /gene="trxA"
                     /locus_tag="PXE50_002443"
     CDS             112..441
                     /gene="trxA"
                     /locus_tag="PXE50_002443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018357021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HDL5623294.1"
                     /translation="MSNVIHTTDATFEQDVLKSDVPVLLDFWAPWCGPCRMIGPVLDD
                     LSVDAQFDGKVKIVKMNVDENPSVPAQFGVRSIPFLLLFKNGEVIAQQVGAIPHAQMA
                     EFIKQAL"
     gene            612..1835
                     /gene="hflK"
                     /locus_tag="PXE50_002444"
     CDS             612..1835
                     /gene="hflK"
                     /locus_tag="PXE50_002444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HDL5623295.1"
                     /translation="MSWNESGNQQDPWGKPGQKKAEPKPEQQEQGSQQEPTNNQRNEQ
                     QPPDLEEVFSSLLKKMGGGKGPNNSSNQPSASLGKFLPVVLGLAAVVWVGSGFYTVQE
                     AERGVVTRLGKLNDIVLPGLNWKPTFIDSVTRVNVERVSELNTSGSMLTQDENMVQVE
                     MTVQYRVEDPAKYLFSVSNPDDSLKQATDSALRYVIGHMTMDEILTTGRATVRERTWS
                     TLRDIIKTYDMGLLVTDVNFQYARPPEEVKAAFDDAIKAQEDEQRLIREAEAYARGEE
                     PIARGQAQRTIEQAQAYKEAVVLNAKGEVERLSQLLPEYKASPELTRERLYIQTMEKV
                     MKNTPKVVMDSSGNNLNVLPFDKLMNSSSVIKAEQPAAAQVVTPQVVQPQVQPRTQIQ
                     PQQAEQQEPTRKGRF"
     gene            1838..2725
                     /gene="hflC"
                     /locus_tag="PXE50_002445"
     CDS             1838..2725
                     /gene="hflC"
                     /locus_tag="PXE50_002445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HDL5623296.1"
                     /translation="MRRLLVPILAVVAFVVLQAITIVNEGERGIMLRFNKVHRDSDQK
                     VVVYEPGIHFKVPFIDSLKVLDARIQTLDGQEDRFVTVEKKDLLVDSYVKWRISDFGQ
                     FYTSTGGDYQKAADLLRRKVGDRLRSEIGSRTIKDIVSGSRGELMAGAQKALNAGEDG
                     AERLGIEVVDVRVKQINLPNEVSSSIYQRMRAERDAVAREHRSQGNEKAEVIRAEVDK
                     KVVLILANANKTAQALRGEGDAQAAKLYSEKFGNEPEFYSFIRSLKAYEDSFAEGQNN
                     MMLLKPNSEFLRFMQAPTK"
     gene            2899..4197
                     /gene="purA"
                     /locus_tag="PXE50_002446"
     CDS             2899..4197
                     /gene="purA"
                     /locus_tag="PXE50_002446"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010869263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HDL5623297.1"
                     /translation="MGKSVAILGAQWGDEGKGKIVDLLTDRVKYVVRYQGGHNAGHTL
                     IINGEKTVLRLIPSGILRDNVTCLIGNGVVLSPEALMKEMGELEERGINVRERLKISE
                     ACPLILPYHVAMDHAREAALGKNKIGTTGRGIGPAYEDKVARRGLRVSDLFDKEHFAA
                     KLKDILDYYNFQLVNYYKVEAVDYQKTLDDVFAIADVITGMVADVTTLLHEARENGDN
                     ILFEGAQGTMLDIDHGTYPFVTSSNTTAGGVATGSGYGPRHLDYVLGIIKAYCTRVGS
                     GPFTTELFDDVGAEIARKGNEFGAVTGRPRRCGWFDAVAVRRAVQINSISGFCMTKLD
                     VLDGFKELKICVAYKMPNGKIVEYAPLAAKDWEGVEPIYETMPGWSENTFRVTKREDL
                     PQAALDYIKRIEELVGVPVDILSTGPDRVETMILRDPFAA"
     gene            complement(4357..4427)
                     /locus_tag="PXE50_002447"
     tRNA            complement(4357..4427)
                     /locus_tag="PXE50_002447"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4397..4399),aa:Arg,seq:tct)
BASE COUNT         1416 a          810 c         1054 g         1293 t
ORIGIN      
        1 gtaaatcttg cttgaaattt tatagattaa tctctatctt atacaaaact gttcgcctta
       61 acttgccagt tagggcgttt ctttttttat ttaatattta aggataaact tatgagcaat
      121 gtcattcata caacagatgc tacatttgaa caagatgttt taaaatcaga tgtaccggta
      181 ttattagact tctgggcgcc ttggtgtggt ccttgccgta tgatcggccc cgtacttgac
      241 gatttatctg ttgatgcaca atttgatggt aaagtaaaaa ttgtcaaaat gaacgtagat
      301 gaaaatccat ctgtaccagc acaatttggc gtacgcagca ttccattttt actattattc
      361 aaaaatggtg aagtgattgc ccagcaagtt ggtgcaattc cgcacgccca aatggctgaa
      421 tttatcaaac aagcattata attttaagag caatactagg gcgaatttat cgccctattt
      481 ttttgcaaat aaatagtgaa aaaagaccgc ttgtttcaga taaacctagt caaaagctta
      541 ctaaataggt acaatcacta acttgcattc taagctttaa agtgcgattc gattttattt
      601 tggagatatt tatgtcgtgg aatgaatcag gcaatcagca agatccttgg ggtaaaccgg
      661 ggcagaaaaa agctgagcca aagcctgagc aacaagaaca gggttcacaa caagagccga
      721 ccaataatca aagaaatgaa caacagcccc ctgatttaga agaagtattt agcagtttat
      781 taaaaaaaat ggggggtgga aaagggccta ataatagttc aaatcaacct agtgcaagct
      841 tagggaaatt tctacctgtg gttttaggtc ttgcagcagt agtttgggtt ggctcaggtt
      901 tttacactgt gcaagaggct gaacgtggtg tggttactcg tttaggtaag ctgaatgata
      961 tcgtgttgcc agggttgaat tggaaaccga cttttattga ttcggttaca agagtaaacg
     1021 tagaacgtgt ttcagagctg aacaccagtg gctcaatgct gactcaagat gaaaatatgg
     1081 tgcaggtaga aatgacggtt cagtatcgtg tggaagaccc ggctaaatat ctgtttagtg
     1141 tgagcaaccc tgatgacagc ttaaaacaag caacagacag tgccttgcgt tatgtgattg
     1201 gtcatatgac gatggatgaa attttaacca cagggcgtgc aaccgtgcgt gaaagaacgt
     1261 ggtcgacatt gcgtgatatt atcaaaacct atgatatggg tttattggta acagacgtaa
     1321 acttccaata tgcacgaccg cctgaagagg tgaaagccgc ctttgatgat gcaatcaaag
     1381 cacaagaaga tgagcaacgc ttaattcgtg aagcggaagc ctatgcaaga ggtgaagagc
     1441 cgattgcacg tggccaggca cagcgtacga ttgagcaagc tcaagcttac aaagaagcag
     1501 ttgtgttaaa tgcgaaaggg gaagtggagc gtttgagtca attattacct gaatataaag
     1561 cctctccaga gctgactcgt gaacgtttat atatccagac aatggaaaaa gtcatgaaaa
     1621 atacgccgaa agtggtgatg gattcaagtg gtaataattt gaatgtattg cctttcgata
     1681 agctaatgaa ttcttcatcg gtaataaaag cggagcagcc tgcggcggca caagtagtta
     1741 caccacaagt tgttcagccg caagtacagc caagaacaca aattcagccg caacaagcag
     1801 aacaacaaga accaactcgt aaggggagat tttaatcatg cgtagattat tagtacctat
     1861 acttgctgta gttgcttttg ttgtgctaca ggcaatcacc attgtaaacg agggcgagcg
     1921 tggcattatg ttacgtttta acaaagttca tcgtgatagc gatcaaaaag tggtggtata
     1981 tgaaccgggg attcacttta aagtaccatt tatcgatagt ttaaaggtat tagatgctcg
     2041 tattcaaact ctagatgggc aagaagaccg ttttgtaaca gtcgagaaaa aagatttatt
     2101 agtggactcc tatgtaaaat ggcgaatcag tgattttggc caattttata cctctactgg
     2161 gggggattac caaaaagcgg cggatttatt acgccgtaag gtaggggatc gtctgcgttc
     2221 cgagattggt tctcgaacca ttaaagatat tgtatccggc tctcgtggtg agttaatggc
     2281 aggagcccaa aaagcgctga atgccggtga agatggagca gagcgtttag gaattgaagt
     2341 ggttgatgtg cgagtgaagc aaatcaactt accaaatgaa gtttcttctt caatttacca
     2401 acgtatgcgt gccgagcgtg atgcggttgc tcgtgaacac cgctcacaag gtaatgagaa
     2461 agcagaggta attcgtgccg aagtggataa aaaagtggtg ctgattttgg caaatgcgaa
     2521 caaaactgcc caagccttgc gaggtgaagg tgacgctcaa gctgcaaaac tctattcaga
     2581 gaaatttggt aacgagccgg aattttacag ttttattcgt agtttaaaag cctatgaaga
     2641 tagctttgcc gaaggtcaaa ataatatgat gttattaaag ccaaacagcg aattcttacg
     2701 ctttatgcaa gcaccgacaa aataattgta tctataaaac ccgatcttgt atcgggtttt
     2761 taattttcat ccctattctg atcataacaa gcggtaaatt ttggctgatt ttttgcaaaa
     2821 aatttgaaaa aattgaccgc ttgcgatatg aagttataat gggtttcgtt attcatccta
     2881 actaaaagag gcatttctat gggtaaaagt gttgctattc ttggcgctca gtggggcgat
     2941 gagggaaaag gcaaaattgt tgatttatta acagatcgtg tgaaatatgt agtacgttat
     3001 caaggtggac ataatgcagg gcatacctta atcattaatg gtgaaaaaac cgttctgcgt
     3061 ttaattccat cgggtatttt gcgtgataac gtgacttgtt taatcggtaa tggtgtagtg
     3121 ctttctccag aggcattaat gaaagagatg ggggagctag aagaacgagg cattaatgtg
     3181 cgtgagcgtt taaaaatttc tgaagcttgc ccgttaattc tgccttatca cgttgcgatg
     3241 gatcacgctc gagaagcggc acttggtaaa aacaaaattg gtacaacagg acgtggtatt
     3301 ggcccagctt atgaagataa agtcgctcgc cgtggtttac gtgtcagcga tttattcgac
     3361 aaagaacatt ttgccgcaaa attaaaagat attttagatt actacaactt ccaattagtc
     3421 aattattaca aagttgaagc ggtagattat caaaaaacct tagatgatgt gtttgcgatt
     3481 gcggatgtga ttaccggaat ggttgccgat gtgacaactt tacttcacga agcacgtgaa
     3541 aacggcgaca atattttatt tgaaggggct caaggcacga tgttagatat cgaccacggt
     3601 acttacccgt tcgtaaccag ctcgaatacg acagcaggcg gtgtggcaac cggatcaggc
     3661 tacggtcctc gtcatttaga ttatgtatta gggattatca aagcctactg tacccgtgta
     3721 ggtagtggac cgttcaccac cgaactattt gacgatgtag gtgctgaaat tgctcgcaaa
     3781 ggtaatgagt tcggagcggt aaccggtcgc cctcgccgtt gtggctggtt tgatgccgta
     3841 gccgttcgcc gagcagtgca aatcaactcc atttcaggct tctgtatgac taaactcgat
     3901 gttttagacg gattcaaaga gctaaaaatc tgcgttgcct acaaaatgcc aaacggaaaa
     3961 attgtcgaat atgcccctct tgcagcaaaa gactgggaag gtgttgaacc aatttatgaa
     4021 acaatgccgg gttggtctga aaatactttc cgtgtgacaa aacgtgaaga tttaccacaa
     4081 gccgcattag attacattaa acgtatcgaa gagctggtcg gtgtgccggt agatattctt
     4141 tctacaggtc cggatcgtgt cgaaacgatg attttgcgtg atccttttgc agcttaataa
     4201 aagataaaat aaagccattt agtgagatag agctagatgg cttttttgtt tgaaccagta
     4261 aactttactt tggcacaatt ttgtcacaat acagaaaata gttctttagc gtgagttttt
     4321 gaggctgtgt aagtatttga atttaaaaga atttaatggc acgccctaaa ggattcgaac
     4381 ctttgaccca cgccttagaa gggcgatagg tattttataa aaggcgttta ttttaactaa
     4441 taaaaacaaa gacttataga gataacccct ctatattacc taccattatt tcacatcttt
     4501 ttacattaaa taacaccatt tacggtacat ttatggaaca cgttggtgat gagctagtct
     4561 tcaaaagtta cta
//
LOCUS       DANLZQ010000142         4548 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.143, whole genome shotgun sequence.
ACCESSION   DANLZQ010000142 DANLZQ010000000
VERSION     DANLZQ010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4548)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4548)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4548
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.143"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            130..720
                     /locus_tag="PXE50_002448"
     CDS             130..720
                     /locus_tag="PXE50_002448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623298.1"
                     /translation="MTTQITTAQINDLLKSHDIQGYANEWQGRRIYINLSAKNNESKG
                     DRNYQLYIDLATGELVSKLGKGLTTRAFDAAVKAFENAFNAKDTAENTAPVESKETEQ
                     ENKQETTKLVITKPTLKGSEKQIDSANEIINLFIAKIGDTSIPVTATQEQITQAQAMV
                     DNFFAMTNAGKWIEKFKGLNDNSEPKQFWLSVKYGW"
     gene            790..1308
                     /locus_tag="PXE50_002449"
     CDS             790..1308
                     /locus_tag="PXE50_002449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623299.1"
                     /translation="MTTQVTPQIMRIIGQIVAATYGDDVPTNVQTIILRYPIRGIGFI
                     SSRRELSINNGEIARLMDKIPGDLEDPKDGMPFDCQGAFWLGYYQYCKLSNDVKNYTS
                     KELSIIGESLYGTQWQSNLARDLRLSDARRVREWVAGERKIPFGVWADLTELVKAKKA
                     NLSSILKKLTID"
     gene            complement(1455..1766)
                     /locus_tag="PXE50_002450"
     CDS             complement(1455..1766)
                     /locus_tag="PXE50_002450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623300.1"
                     /translation="MTKTKHKHPLAEAFYQLGKDVGEINRRLVVVDEQSLKLQELKQT
                     INEQTEQIKTLGTVVNKLIDALQQSQSLNVRSESAVAATENQDHLNDGVQYQGPGRAR
                     A"
     gene            complement(1759..1908)
                     /locus_tag="PXE50_002451"
     CDS             complement(1759..1908)
                     /locus_tag="PXE50_002451"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623301.1"
                     /translation="MDNILITIHPTETIDITIDKLVVIHIGEEYGDTPDFLTIYQQAK
                     ELNDD"
     gene            complement(2142..2435)
                     /locus_tag="PXE50_002452"
     CDS             complement(2142..2435)
                     /locus_tag="PXE50_002452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623302.1"
                     /translation="MTTFNKILNPMYSTIASYSTQDDGSLNAKYVVGTGDDTDGEVTN
                     FVIITSEYKYIDAQSAKAITDAPLTKEDIGKTPTQIMLGRIYNHLKETGQIVV"
     gene            complement(2558..>4548)
                     /locus_tag="PXE50_002453"
     CDS             complement(2558..>4548)
                     /locus_tag="PXE50_002453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1983 domain-containing protein"
                     /protein_id="HDL5623303.1"
                     /translation="FTAEWTSERAYLLVGVNGTYETTDWLAFHSVKLEKGNVATDWTP
                     APEDVDSAVSAVSAKIDTIQETLANADSALSSRIDAVTASVGSNLAKITQVSNAVAGV
                     DGKLSATHTIKTETIAGGRKAIAGIALGAAADNRNAESSVIVMADKFEVVKNAQDGQP
                     VRLFGVAQNKVAINGNLIATGTIKGSHIDADSVRAGILTAGAIRTEHLAAGQISADKL
                     AIGLGGNLLVNPIFATPDLSIAPFGWNYWRGEVGDRLNIDTRNIFNRNEQDNYGLKNG
                     GLPNELVFSMRYSTTKETSDTGRIGWLSQDINVVPNKKYIASVWLACHRGQAKLVIEN
                     IEKPGGAYLGWIGDSEVITGYSANQGEFKNMKRVKVVFTAPTSGCIRFALRLDNIQGK
                     ANPFLFARRPMLEEASDNVTDITQPSPWQNAGVTAIHGGSIVTNTVTAQQIAANTITA
                     NEIATGTIAARNMAANSINASHIVGSSITADKLNVNNLAAISANLGKVTAGTITGTTI
                     TGNTISGGSINGTTISGTTISGGTIKGARLEGATGKFTGELEVSQLIGGGVIEQVTGK
                     LKYSHRNRIYEGQEHGENSSSPIYRHEYIYKATVTINAAPTRRYIEIIGSESFILEAN
                     QSITKTIEKSLNRNASGSSLDFIVLAYSISTAKYISIS"
BASE COUNT         1346 a          953 c          880 g         1369 t
ORIGIN      
        1 ataaattttt taaaaatttg caaaaaaatt taaaaaaact cttgcaataa aattattatg
       61 cgcctataat taggctcata aagcaaggct agggagccag ctaataacca tcagccaaag
      121 ggggctaaaa tgacaactca aattacaacc gcacaaatca acgacttatt aaaatctcac
      181 gatatccaag gctacgccaa cgaatggcaa ggtcgccgca tttacattaa cctttcagca
      241 aaaaataacg aaagcaaagg tgatcggaat taccagttgt acattgacct agccacaggc
      301 gagttagtga gcaaacttgg caaaggatta acaaccagag cgtttgatgc tgccgtaaaa
      361 gcttttgaaa acgcttttaa tgctaaagac accgctgaaa atacagcgcc ggtagaaagc
      421 aaagaaacag agcaagagaa caaacaagaa acaactaagc ttgtaatcac aaaaccaaca
      481 ttaaaaggct ctgaaaaaca aattgattcg gcaaacgaaa tcatcaatct ttttattgcg
      541 aagattggtg atacctctat cccagtaaca gcaacgcaag aacaaattac tcaagctcaa
      601 gcaatggtag ataatttttt tgcaatgaca aacgctggaa agtggatcga aaaatttaaa
      661 ggtctaaatg ataatagcga accaaagcaa ttttggttat ccgtaaaata tggatggtag
      721 attgagataa caaataagcc gtaagagcaa aggcttacgg ctaaaacaaa cagataactg
      781 gagattatta tgactacaca agtaacacca caaattatgc gcattatcgg gcaaattgtc
      841 gctgctactt atggtgacga tgtgccaaca aacgtacaga caataatctt gagataccct
      901 ataagaggca tagggtttat ctctagtcgc agagagctat ctattaacaa tggagagata
      961 gcaagattaa tggataaaat accaggcgac ctcgaggacc ctaaagacgg gatgcctttt
     1021 gattgtcagg gggcgttttg gcttggatac tatcaatact gcaaattaag taacgatgta
     1081 aaaaattaca catcaaaaga gctatccatc attggcgagt cattgtatgg cactcaatgg
     1141 cagtctaatc tagcgagaga tttgagatta tctgatgctc gccgtgtccg cgaatgggtg
     1201 gctggtgaac gtaaaatccc tttcggggtt tgggctgatt tgaccgaatt ggttaaagcc
     1261 aaaaaagcta acttatcatc aattcttaaa aaattaacaa tagattagca ctgattttaa
     1321 agcccctctc ggggcttaat tatagaaaat aaaatcacaa tggctaattt tgccaaattt
     1381 gcctgttaaa acgtgcgaaa aattacaaaa aacggctaga gctatagccg ttttgagtgc
     1441 agatgttaac agagttaagc tctagcacgt cctgggcctt gatactgcac accatcattt
     1501 aaatgatctt gattttcggt tgctgctaca gcagattctg atcttacatt taaactttgt
     1561 gactgttgta atgcatcaat aagtttattt accactgttc cgagtgtttt aatttgctcg
     1621 gtttgctcat taatagtctg ctttaactct tgcagtttta atgattgctc atccacaacc
     1681 actaatcgac ggttaatctc tcctacgtct ttacctaatt gataaaatgc ttctgcaagt
     1741 gggtgtttgt gtttagtttt agtcatcgtt aagctccttt gcttgttggt atatagttaa
     1801 aaagtcaggt gtgtcaccat actcctcacc tatatggata actaccagtt tgtctatggt
     1861 gatatcaata gtttcggttg gatgtatagt gattaagata ttgtccatat tcccgcctta
     1921 aatttgggtt tggtcaggga taagttggat cgtgccgtag tactgccatt ttgggtggat
     1981 agctcaattt gaggctctgt gctgccctct actatggcgt gtaaatccag cctaataccc
     2041 tctaaattta caggctcgcc atttgtttgc ctaaaaaaaa aggcgataac ttacgtcatc
     2101 gcctctgaaa aacttaaatt tatgcttttg catttagacc cctacactac aatctgaccg
     2161 gtttctttga ggtggttgta gatacgtcct aacataatct gcgttggcgt tttgccaata
     2221 tcctcttttg ttagcggtgc atcagtaatc gccttggcgg actgtgcatc aatgtatttg
     2281 tactcacttg tgatgattac aaagtttgtt acttctccat cggtatcatc gcctgtaccg
     2341 accacatatt tagcattgag cgagccgtca tcttgcgttg agtagcttgc gatggtggaa
     2401 tacattgggt ttaagatttt gttaaaagtt gtcataattt ttccttttat cgatagttga
     2461 aataaaaaca atcgcctgaa ttgacctgca agcggttggt tttggatatt taaaaaagct
     2521 gtggctatcc gcactcagta ctacattgag gcgataacta actgatagag atatatttag
     2581 ccgtcgaaat ggaataggct aaaacaataa aatctaaaga gctaccactt gcatttctat
     2641 ttaatgattt ctctattgtt tttgtgattg attgatttgc ttctaaaatg aatgactcac
     2701 ttccgatgat ttcaatatac ctccttgtcg gcgctgcatt tatggtgaca gttgctttat
     2761 agatatattc gtgtctataa attggagagg aggagttttc tccatgttct tgcccctcat
     2821 aaatgcgatt acgatgtgaa tattttaatt tgcctgtaac ctgctctata acacctcccc
     2881 ctattaattg agatacttca agttcgccgg taaatttgcc agtagccccc tccaatcttg
     2941 caccctttat tgtgccgcca gagatagttg taccgctaat tgttgtacca ttaatacttc
     3001 cgccactaat tgtattacca gtaattgtcg tacctgtaat tgtaccagca gttaccttac
     3061 caagatttgc cgatattgcc gctaaattgt ttacatttag cttatccgca gtgatcgaac
     3121 tccccacaat atgacttgca ttaatcgagt ttgctgccat atttcgagct gcaatcgtgc
     3181 cggttgcgat ttcgttggcg gtaatggtat ttgctgcaat ttgttgagca gtaacggtat
     3241 tagtaactat tgatccaccg tggatagcgg ttacaccggc attttgccaa gggctaggct
     3301 gagtgatatc tgtaacatta tcactagcct cctcaagcat tggcctacga gcaaataaaa
     3361 atggattagc tttaccttga atattatcta atcgtaatgc gaaacgaata cagcctgaag
     3421 taggtgcagt aaatacaacc ttaacccgtt tcatattttt aaattcgcct tgattagcac
     3481 tatagccagt aattacctcg ctgtcgccta tccaacctaa gtaagcacca ccaggttttt
     3541 cgatattctc aatgactaat ttagcttgcc cacgatgaca agctaaccat acggaggcaa
     3601 tatatttttt attaggcaca acattaatat cctgagataa ccacccaatt cgcccagtat
     3661 cagaggtttc ctttgtagtg ctataccgca tcgaaaatac taactcattt ggtagtcctc
     3721 cattttttag tccgtaatta tcttgttcat tcctattgaa aatattacgg gtgtcaatat
     3781 ttagccgatc accaacttct cctcgccagt agttccagcc aaacggagct attgacaaat
     3841 cgggtgttgc aaaaatagga ttaaccagca aattcccacc tagcccaatc gctaacttat
     3901 ccgccgatat ttgccctgct gccaggtgtt ccgtacggat agctcccgcc gtcaatattc
     3961 cggctcttac tgagtctgca tcaatgtggc tacctttaat tgtacctgtt gcaattaaat
     4021 tcccattaat cgcaacttta ttttgagcca caccaaacaa tcgtaccggt tggccgtctt
     4081 gagcattttt tactacctca aatttgtctg ccattacaat gacagaggat tctgcattgc
     4141 gattgtctgc cgcggcacca agtgcgatac cggcaatcgc tttacgtcca ccggcaatgg
     4201 tttcggtttt gatggtatgg gtagcagata atttgccgtc cacaccggct acagcattac
     4261 tcacttgagt aatttttgcc aagtttgagc caacagaagc agtaacggca tcaatacgag
     4321 agcttaatgc agagtcggca ttcgctaaag tctcctgaat agtatcaatt ttagccgaaa
     4381 cagcactaac cgcactgtcc acatcttcag gtgctggcgt ccagtctgtg gctacgttgc
     4441 ctttttcaag tttgacgctg tgaaacgcta accaatctgt ggtctcataa gtaccattta
     4501 caccaacaag cagataggct cgctcacttg tccattcggc agtaaagg
//
LOCUS       DANLZQ010000143         4457 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.144, whole genome shotgun sequence.
ACCESSION   DANLZQ010000143 DANLZQ010000000
VERSION     DANLZQ010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4457)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4457)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4457
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.144"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            27..1484
                     /locus_tag="PXE50_002454"
     CDS             27..1484
                     /locus_tag="PXE50_002454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623304.1"
                     /translation="MRSTFKLTLAALAVSIVLSGCKSSQGPSIVADSPPPKEITATDG
                     NDKEKTDNKEKKSAQPNKSDPQPDKPANAKDPVKPDAETNKPSKKDKEYTPPATEKID
                     NSSVQPDKMVPNPIENKENDSNKPNPKESDSDNNDKVTEGNKPNAPTETVNKDKEAEK
                     SKKENKEDSSNNTPNINFDGAKPIDTDSKGSPYRVINLNPRKSVVNASAMQKVDFDSF
                     TDESVENSPFVSSDTEKEYNNTLVFGLGAGDKDSYFKNLNQKGDKHLGIHSGVYEDAN
                     LEGNTKKINYLYVNQPYSSYGALFTDQKDSHLFNVRLTAGRDDVKENGDSYAEYGVFT
                     QSGKEAKWNDNLIGDATYKGQAIARVIRQVNGEQVAGIPQFDGDVTLNLHLSKEWNES
                     KLNGKIDSQSVGVITLKESEIANPTALRSNIGFGEEVIVENKENLVGDYAVDFTGPQL
                     EEAVGVVELENEAETFSENEVIKYNAVFGVSKAAK"
     gene            1548..2960
                     /locus_tag="PXE50_002455"
     CDS             1548..2960
                     /locus_tag="PXE50_002455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HDL5623305.1"
                     /translation="MKKIALLALFPMMLFARDPNTTQAYIEHTAQPTTTPQRVKIEKS
                     VPIFNETELRANQLLTEKLLIQAIYSRRLANMEKLTAIYRDFTHIDPVLLRYAQGKIA
                     LLKGDYAQAIQHFQTILAKQPKLNTVRIELAIALLYDQQLNQAQAQFEKAKSAEHLPP
                     KVHALIEQYQQHLAKKQEWKFSFSANYVRDGNINRTSKQPNIEQTGYVKQPNLLPQTA
                     HGVHYAFGLQRDFNLFDSHYVSFDNQTQGELYWDNHDYDEITNRTLFGYAYKKSDQTT
                     RLLPFYEKRWKHHRSERWTNGIRLEHAQWFSPHWQLATALEYGKKRYFDLPIYNGSYK
                     LASATLLWLRNPQQFFFVGTDFNQDKTQLKQYSSDTKGIRFGWQREWQALELSSRLTL
                     GYTDRRYKDTAILGGKLNLGRIRHDRVQSANLTLWKRDWHWLGLMPKLQFSYAKHRSN
                     LPSLYAYTDKNINLIIESRF"
     gene            complement(3210..3533)
                     /locus_tag="PXE50_002456"
     CDS             complement(3210..3533)
                     /locus_tag="PXE50_002456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin"
                     /protein_id="HDL5623306.1"
                     /translation="MQKAYQIYTHSEREKVTEAKLELGKVETRLRNEGKTKEEIAQHP
                     EYLQLKRDLNDKQQTFDNAYGTGSKTKRAVDAVTAALQGLAAKDSGQAAVGLASPYLN
                     EQIKK"
     gene            complement(3502..4029)
                     /locus_tag="PXE50_002457"
     CDS             complement(3502..4029)
                     /locus_tag="PXE50_002457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HDL5623307.1"
                     /translation="MRDKNKERQQTLERYQELYDQDPELRVIAANSEGDLDLLQETFF
                     VKGELTITDSTPKEKWNWLHMCNLNSYSPSPLSVVEFYIKHGVDVNAQDCYGMTPLHY
                     AMRAKNVDAAIALLNAGADPNIENKDQVIPLSMIGAVPKEIELIEHDISEVKETQELV
                     KGIGEIAEGLSDLHA"
     gene            complement(4031..4243)
                     /locus_tag="PXE50_002458"
     CDS             complement(4031..4243)
                     /locus_tag="PXE50_002458"
                     /inference="COORDINATES: protein motif:HMM:NF025767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH/ENDO VII family nuclease"
                     /protein_id="HDL5623308.1"
                     /translation="MYCWEHRRLSLAAKELNWSQKQFNDYVNARPENFRLENISENRS
                     HKNEMPGKDNIKSIIDDMKKFQQIGK"
     gene            complement(4258..>4457)
                     /locus_tag="PXE50_002459"
     CDS             complement(4258..>4457)
                     /locus_tag="PXE50_002459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HDL5623309.1"
                     /translation="NQDNLIPLSMIGYLPDRLDVLELMLEKGANVHFLVNKNETILES
                     YKPTEMEPNLAPIYELMLKYA"
BASE COUNT         1427 a          933 c          803 g         1294 t
ORIGIN      
        1 tggatttaat ctgacggaga caaaatatgc gttctacatt caaacttact cttgcagctt
       61 tagctgtttc tattgtttta agtggctgta aatctagcca aggtccatct attgttgcag
      121 acagccctcc acctaaggaa ataacagcta ctgatggcaa cgataaagag aaaaccgata
      181 acaaagagaa aaagtctgcg caaccaaata aatccgatcc tcaaccggat aaacctgcta
      241 acgcaaaaga cccagtaaaa cctgatgcgg agacaaataa accaagtaaa aaagataaag
      301 aatatacacc acctgctact gaaaaaatcg ataactcatc agtacagccg gataaaatgg
      361 tgcctaatcc tatcgagaat aaggaaaacg acagtaataa acctaacccc aaagaaagcg
      421 atagcgataa taatgacaaa gtcactgaag gcaataaacc aaatgcccca acagaaacag
      481 taaataaaga taaagaagct gagaaaagta aaaaggagaa taaagaggac tcaagcaata
      541 atactcctaa cattaatttt gacggggcaa agcctataga tacagatagt aaaggtagcc
      601 cgtaccgagt aataaaccta aatccgagaa aaagcgtagt aaatgcaagt gctatgcaaa
      661 aagtagattt cgactctttt acggatgaat ctgttgaaaa ttcaccattt gtcagtagcg
      721 atactgaaaa agaatacaat aatacacttg tttttgggct tggtgccgga gataaagatt
      781 cttattttaa gaacttaaat caaaaagggg ataaacattt aggtattcat agtggcgtgt
      841 atgaagatgc gaatttagaa ggtaatacta aaaaaattaa ctatctctat gtaaatcaac
      901 cttattcgag ctatggtgct ttatttacgg accaaaaaga cagccattta ttcaacgttc
      961 gtctgaccgc tggtagagat gatgtaaaag aaaatggaga tagttatgcc gaatatggtg
     1021 tattcacaca atcaggaaaa gaagctaaat ggaatgataa cctgattggt gatgccactt
     1081 acaaaggtca agctattgct cgcgttattc gtcaggtaaa tggggaacaa gtcgcaggta
     1141 ttcctcaatt tgatggtgat gttacattaa atttacacct ttccaaagaa tggaatgaaa
     1201 gtaaactaaa cggcaaaatt gatagccaaa gtgttggggt aattacactt aaagaaagtg
     1261 aaatagctaa ccctaccgca ctccgctcaa atattggttt tggagaagaa gtcatagttg
     1321 agaataaaga gaatcttgtg ggtgattacg ctgtcgattt taccgggcct cagcttgaag
     1381 aggcggtagg cgttgttgaa ttagaaaacg aagccgagac attctctgaa aatgaagtca
     1441 ttaaatacaa tgcggtattt ggcgtaagca aagcggcgaa atagtatttt ttgtatctta
     1501 caaagggctg ttaagccctt ttatttttat tattttaagg ataaaaaatg aaaaaaattg
     1561 ccttactggc acttttccca atgatgttat ttgcccgaga tcctaatact acacaggctt
     1621 atattgagca tactgcacag ccaactacaa ccccccaaag ggtcaagatc gaaaaatcag
     1681 tgcctatttt taacgaaact gaattacgtg ctaatcaatt attgaccgaa aagctactta
     1741 tccaagctat ttatagtcgt aggcttgcta acatggaaaa attaactgcg atttatcggg
     1801 attttaccca cattgacccg gttttactgc gttatgcaca aggtaaaatt gccctactga
     1861 aaggcgatta cgcacaggca attcagcact tccaaaccat tcttgccaaa caacccaaac
     1921 taaacactgt aagaattgag ctggcgattg ctctattgta cgatcagcaa cttaatcaag
     1981 cccaagcaca atttgaaaaa gccaaaagtg ccgaacatct accgcctaaa gttcacgcat
     2041 taattgagca atatcagcaa catctggcaa aaaaacagga atggaaattt agtttttcag
     2101 ccaattatgt gcgagacggc aacattaacc gaacctcgaa acagccgaac attgagcaaa
     2161 ccggctatgt aaaacaacct aatttgttgc cccaaaccgc acatggtgtt cactatgcgt
     2221 ttggattaca gagagatttc aacctgttcg actcacacta tgtgagtttt gacaaccaaa
     2281 cccaaggtga actttattgg gataaccacg attatgatga aattaccaat cgcaccttgt
     2341 ttggatacgc ttacaaaaaa tccgaccaaa ccacccgctt gttaccgttt tatgaaaaac
     2401 gctggaaaca tcaccgttcg gaacgctgga caaacggaat tcgacttgaa cacgcacaat
     2461 ggttttcacc gcattggcaa ctcgccaccg cattggaata cggcaaaaaa cgttattttg
     2521 atttgccgat ttataacggc agctacaaac ttgcctctgc cacattgctt tggttacgca
     2581 atccacaaca atttttcttt gtcggcactg atttcaatca agacaaaact cagttaaaac
     2641 aatatagctc tgatactaaa ggcatacgct ttggctggca acgagaatgg caagccctcg
     2701 agctttccag tcgcctcacg cttggctata ctgacagacg ttacaaagac accgctatat
     2761 tgggaggaaa acttaatctt ggcagaatcc gccatgaccg tgtgcaaagt gctaacctca
     2821 cgctttggaa acgagattgg cactggctcg gcctgatgcc gaagctgcaa tttagttacg
     2881 ccaaacaccg tagcaacctg ccgagcctct atgcctacac cgataaaaac atcaatttaa
     2941 ttattgaaag tcggttctag ctccataaaa acaacaagcg gttaaaattc ctagaaattt
     3001 tgcaaattgc aaaaaatgta gaaaatttaa ccgcttgtat ctatactgca gcttcttttc
     3061 cttcagtata aattaatata caccgttgca acaataatgg ctgctccctg tcatcacctt
     3121 gaactgaaaa ttgctcaagg tggatatgac tatcgcagcc gcttccaccg cacccagtaa
     3181 tgtatgggca agcaggttgg cttgggtatc tactttttaa tttgttcgtt gagatatggc
     3241 gaagctaagc ctactgctgc ttgtcctgaa tctttcgccg ctaaaccttg taaggctgcc
     3301 gtcaccgcat ccaccgcacg cttggttttg ctgcccgtgc cgtaggcgtt atcaaaagtc
     3361 tgctgtttat cgtttaaatc ccgttttaat tggagatatt caggatgttg agcgatttct
     3421 tcttttgttt ttccctcatt tctcaaacgg gtttccactt tgcccaattc cagcttcgct
     3481 tccgtcactt tttcacgctc actatgcgtg taaatctgat aagccttctg caatctcgcc
     3541 tatgcccttc accagctcct gtgtttcttt cacctcacta atatcgtgtt ctattaactc
     3601 tatctcttta ggaactgctc caatcataga caatggaata acttgatctt tattttcaat
     3661 attcggatct gcccccgcat ttaataatgc tatcgctgca tcaacattct ttgccctcat
     3721 tgcataatgt aaaggggtca ttccgtagca atcttgggca ttaacatcta ccccatgttt
     3781 aatgtaaaat tcgactacag aaagaggaga tggtgaataa ctatttaagt tacacatatg
     3841 tagccagttc catttttctt ttggtgtgct atccgtaata gtcagttcac cttttacgaa
     3901 aaatgtttct tgtaaaagat cgagatcgcc ttctgagttt gctgcaataa ctcttaattc
     3961 aggatcttga tcatataatt cttgataacg ttctaatgtc tgctgacgtt ctttattctt
     4021 atctctcatt ttactttcct atttgttgga attttttcat gtcatcgatt attgatttaa
     4081 tattatcttt ccccggcatc tcattcttat gactccgatt ttcagatata ttttctaatc
     4141 tgaaattctc cggtctcgca ttaacataat cattaaattg tttttgactc caatttaatt
     4201 cttttgccgc taatgataat cggcgatgtt cccagcaata tatattctat gcatgcacta
     4261 agcatatttc agcattagtt catatatagg tgctaaatta ggctccatct ctgttggttt
     4321 atagctttcc aatatcgttt catttttatt aactaaaaaa tgtacattcg cacctttctc
     4381 taacataagt tctaaaacat ctaatctatc aggtaaatac cctatcattg ataaaggtat
     4441 taaattatct tgatttg
//
LOCUS       DANLZQ010000144         4433 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.145, whole genome shotgun sequence.
ACCESSION   DANLZQ010000144 DANLZQ010000000
VERSION     DANLZQ010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4433)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4433)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4433
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.145"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            157..1575
                     /gene="leuC"
                     /locus_tag="PXE50_002460"
     CDS             157..1575
                     /gene="leuC"
                     /locus_tag="PXE50_002460"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HDL5623310.1"
                     /translation="MQQAKTLYQKLFDSHVVYEAEGETPIIYINRHLIHEVTSPQAFD
                     GLRVAGRQVRQVSKTFGTMDHSISTQVRDVQQLEGQAKIQVLELEKNCEETGIPLFDI
                     TKKQQGIVHVMGPEQGLTLPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTL
                     KQARAKSMKVEVRGKVNPGITAKDIVLAIIGKTTMAGGTGYVVEFCGEAIRDLSMEGR
                     MTVCNMAIEFGAKAGIVAPDETTFAYLKDRPNAPKGQDWEDAIEYWKTLKADEGAVYD
                     AEVILEAKDIAPQVTWGTNPGQVIGIDDVIPNPEDMADPVTRASAEKALAYIGLEAHT
                     DMKDVPVDQVFIGSCTNARIEDLRAAAAVMKGRKKADNVKRILVVPGSGLVKEQAEKE
                     GLDKIFIEAGAEWRNPGCSMCLGMNDDRLGEWERCASTSNRNFEGRQGRNGRTHLVSP
                     AMAAAAAVFGKFMDIRKVSLNA"
     gene            1588..2190
                     /gene="leuD"
                     /locus_tag="PXE50_002461"
     CDS             1588..2190
                     /gene="leuD"
                     /locus_tag="PXE50_002461"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HDL5623311.1"
                     /translation="MAGIKQHSGLVVPLDAANVDTDAIIPKQFLQAITRVGFGKHLFH
                     EWRYLDAEETQINPDFVLNFPQYQGATILLARKNLGCGSSREHAPWALADYGFKVMIA
                     PSFADIFYNNSLNNHMLPIKLTEEEVEEIFQWVWANEGKQIHVDLEAMTVTVGEKVYT
                     FELDEFRRHCLLNGLDNIGLTLQHEAAIAAYEKNIPAFLR"
     gene            complement(2262..2726)
                     /locus_tag="PXE50_002462"
     CDS             complement(2262..2726)
                     /locus_tag="PXE50_002462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623312.1"
                     /translation="MNKFKIALMATVAIGLFACTPSPQSNSTKQQAQVGYLKQNISQA
                     ELNNPKDFKRYSYYCKNFATGSSSYLATYFPLWSESRKQENFGIYFQLDGGKVYPFDH
                     LANISLNARATKFEVRYRSYQPIEGSFVELVAREFTSTYYKNNVPWLECREG"
     gene            complement(2750..3256)
                     /locus_tag="PXE50_002463"
     CDS             complement(2750..3256)
                     /locus_tag="PXE50_002463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623313.1"
                     /translation="MADPHIQSPMDFWDYLTVIIYRSGFVLATLMLLLLPYYPQTAQY
                     GLLVSGTMLASSLHLYAKSFRLIFQFSVWIGLLGAVFNFPLLAFGAMLLVIGGLSYKE
                     YFCFRVFGLNFQPLLVAVLWIAFALEWSLLVQILSLVCGLLLLVLSIQKWRMPLHFDI
                     GDKSKYQI"
     gene            complement(3279..4256)
                     /gene="dusA"
                     /locus_tag="PXE50_002464"
     CDS             complement(3279..4256)
                     /gene="dusA"
                     /locus_tag="PXE50_002464"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HDL5623314.1"
                     /translation="MTNEIQPFYRGRFSVAPMLDWTTRHCRYFHRQFSRQALLYTEMI
                     TAPAIIHAKYDLLEYDPSENPVALQLGGSDPAQLAHCAKLVAERGYAEINLNVGCPSD
                     RVQNGMFGACLMAKADLVADCIKAMQDAVEIPVTVKHRIGIDDLDSYEFLCDFIEKVQ
                     PYSNDFIVHARKAWLTGLSPKENREIPPLDYDRVYQLKRDFPHLKISINGGIKTIEEI
                     KQHLQFVDGVMVGREAYQNPSMLGEIDSQIFNENRPLVTAKEAVEKMFPYIERELAKG
                     VYLNHIVRHMLGAFQHCKGARQWRRHLSENATKSGAGVEVVEQALAFIG"
BASE COUNT         1378 a          974 c          907 g         1174 t
ORIGIN      
        1 cagaataaaa acccttattt agcataaaaa tactgtttta ctttcatttt tttaatcgtt
       61 atattcactc catatcagca agcggtcatt tttgcaaaat tttttgcaaa tttaaccgct
      121 tgtattaaaa gttacccttt tgagttggaa cattttatgc aacaagccaa aaccctatat
      181 caaaaactat tcgactcaca cgttgtgtat gaagccgaag gcgaaacgcc gattatttat
      241 attaaccgcc acttaattca cgaagttacc agcccgcaag cgtttgacgg cttgcgtgtt
      301 gccggtcgcc aagttcgcca agtcagtaaa accttcggca caatggacca cagtatttca
      361 acccaagtgc gtgatgtaca gcaacttgaa gggcaagcga aaattcaagt attagaatta
      421 gaaaaaaact gcgaagaaac cggtatccca ctgtttgaca tcactaaaaa acaacaaggt
      481 atcgttcacg taatggggcc ggagcaaggc ttaactttac ccggtatgac cattgtatgt
      541 ggtgactcgc acaccgccac tcacggggcc tttggtgcgt tagccttcgg tatcggtact
      601 tccgaagtgg aacacgtttt agccacccaa accttaaaac aggcccgtgc aaaaagtatg
      661 aaagtggaag tccgtggcaa agtaaacccg ggcattaccg caaaagatat tgtgcttgcg
      721 atcatcggta aaacaactat ggctggcggt acaggctatg tagtggaatt ttgtggcgaa
      781 gcaattcgtg atctttcaat ggaagggcga atgacagtgt gtaatatggc gattgagttt
      841 ggtgcgaaag ccggtattgt tgccccggat gaaaccacgt tcgcttactt gaaagaccgc
      901 ccaaatgcac caaaaggtca agattgggaa gatgccattg aatattggaa aaccctcaaa
      961 gccgatgagg gtgcagttta cgatgcggaa gtgatcttag aagcaaaaga cattgctcca
     1021 caagtgactt ggggaaccaa cccggggcag gtgatcggta ttgatgatgt aattccaaat
     1081 ccggaagata tggccgatcc tgttactcgt gcctctgcgg aaaaagcctt agcttacatc
     1141 ggcttagaag cccatacaga tatgaaagat gtaccggttg atcaagtctt tattggttct
     1201 tgtactaatg ctcgtattga agatttgcgt gctgcggcag cagtaatgaa agggcgtaaa
     1261 aaagccgaca atgtaaaacg tattctcgtt gtgccaggtt caggtttggt aaaagagcaa
     1321 gcagaaaaag agggcttgga taaaatcttc attgaagccg gtgcagaatg gcgtaacccg
     1381 ggttgctcaa tgtgtttggg aatgaacgat gaccgcttgg gcgaatggga acgttgtgcc
     1441 tctacgtcta accgtaactt tgagggcaga caaggacgta acggtcgtac ccacttagtc
     1501 agcccggcaa tggcggctgc ggcggcggtg ttcggtaaat ttatggatat tcgcaaagtg
     1561 tcattaaacg cataatagga ggaaaaaatg gcaggtatta aacaacattc aggcttggtc
     1621 gttcctcttg atgcagcgaa cgtagacacc gatgcaatca ttccaaaaca atttttgcaa
     1681 gccattactc gagtcggctt tggtaagcac cttttccacg aatggcgtta tttagatgcg
     1741 gaagagactc aaatcaaccc cgatttcgta ctgaacttcc cacaatatca aggtgcaacc
     1801 attttactcg cccgtaaaaa tttaggctgt ggctcttctc gtgagcacgc cccttgggca
     1861 ttggcagatt acggttttaa agtaatgatc gccccaagtt ttgcggatat tttctacaat
     1921 aacagcttaa ataaccatat gttgccgatt aaattaaccg aagaggaagt cgaagagatc
     1981 ttccaatggg tgtgggcaaa tgaaggaaaa cagatccacg ttgatttaga agcgatgact
     2041 gtgactgttg gcgagaaagt ttataccttt gagttagacg aattccgccg ccactgctta
     2101 ttaaacggtt tggataatat cggcttaacc ctacaacacg aagctgcgat tgctgcttat
     2161 gagaaaaaca ttccggcatt tttacgctaa ttaaaataca aaaaaacggc taacatcttt
     2221 aaggcgttag tcgttttctt tttagccatt ttctttggca attagccttc tcggcactct
     2281 aaccaaggca cattattttt gtaataagtt gaagtaaact ctcgtgccac taactctaca
     2341 aaactgcctt caatcggctg ataagaacga taacgcactt caaattttgt tgctcttgca
     2401 ttcaaactga tgttggcaag atggtcgaac ggataaacct ttccgccatc aagttgaaaa
     2461 tagataccaa aattctcttg cttacggctt tcagaccaaa gtggaaaata ggttgccaaa
     2521 tatgaactgc tgcctgttgc aaaattctta caataatagc tataacgctt aaaatctttc
     2581 ggattattca attccgcttg gctgatattc tgtttcaaat atccaacctg tgcttgttgc
     2641 ttagttgagt ttgattgtgg tgagggcgta caagcaaata agccaattgc cactgttgcc
     2701 attaaagcaa ttttgaattt attcataaaa atcccgataa aatattaaat taaatctgat
     2761 atttgctttt atcgccaata tcaaaatgca gcggcattcg ccatttttga atactcagca
     2821 caagaagcaa caagccacag acaaggctta aaatttgcac caataaagac cattctagtg
     2881 caaaagcaat ccacaatacc gccactaaaa gcggttggaa atttaagccg aatactctaa
     2941 aacagaaata ttctttatag cttaatccgc cgatcaccag tagcattgcc ccgaacgcaa
     3001 gcaaagggaa attaaacaca gcaccaagta agccaatcca aacagaaaat tggaaaatca
     3061 ggcgaaacga tttggcataa agatgcaaag aagatgccaa cattgtgcca gatactaata
     3121 aaccatattg tgccgtttgc ggataataag gcaataaaag caacatcaat gtagctaaca
     3181 caaaaccgct gcggtaaatg atgacggtta aataatccca aaaatccatt ggcgattgaa
     3241 tatgtggatc tgccataact gcctccttaa acaataaatt agccaataaa cgcaagggct
     3301 tgttccacta cttctacacc ggctcccgac ttagtggcat tttcacttaa atgacgacgc
     3361 cactgcctcg ctcctttgca atgttgaaac gcaccaagca tatggcgaac gatatgattt
     3421 aaatagacac ctttggcaag ctcacgttca atataaggga acatcttttc caccgcttct
     3481 tttgccgtta caagcggtcg attttcatta aaaatttgcg aatcgatctc gcctagcatt
     3541 gacgggtttt gataggcctc acgccctacc attaccccat caacaaactg caaatgctgt
     3601 ttaatttcct caatggtttt aatgccgcca ttgatgctaa tctttaaatg cggaaaatct
     3661 cgcttgagct gataaacccg atcataatct aaaggcggaa tttcacggtt ttccttcggg
     3721 cttaaccctg tcagccacgc cttgcgggcg tgtacgataa aatcattgct ataaggttgc
     3781 actttttcga taaaatcaca caaaaattca tagctgtcta aatcatcaat cccaatacga
     3841 tgtttaaccg tgaccggaat ttccaccgca tcttgcattg ctttaataca atccgccact
     3901 aaatctgctt ttgccatcaa acaagcccca aacataccgt tttgcactcg gtctgacggg
     3961 caaccgacat ttagattaat ctcggcatag cctcgctctg ccaccaattt ggcacaatga
     4021 gccaactgtg ccgggtcgct tccacccagt tgcaaagcca ccggattctc gctcggatca
     4081 tattccaaca aatcatattt ggcgtgaata atcgccgggg cggtgatcat ttcggtataa
     4141 agcaaggctt gacgactaaa ttggcgatga aaatagcggc agtgacgggt tgtccaatct
     4201 aacattggag caaccgaaaa acgtccacgg taaaaaggtt gaatttcgtt agtcataaaa
     4261 atatcaaaat aaagcggtaa aaaatcagta aaaaataacc gcttgtaagc gattcaaaac
     4321 aagcagccat catactcgaa aaagccagat aaacatagtt tcctcaaggc ttccccatct
     4381 atctgcgcac ttttaaaaca accttaaaac acaatatata gtgtttcaac atc
//
LOCUS       DANLZQ010000145         4417 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.146, whole genome shotgun sequence.
ACCESSION   DANLZQ010000145 DANLZQ010000000
VERSION     DANLZQ010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4417)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4417)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4417
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.146"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..668
                     /locus_tag="PXE50_002465"
     CDS             <1..668
                     /locus_tag="PXE50_002465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HDL5623315.1"
                     /translation="IRNIMAHELGRENPLAYEDYSLINQKFLKFQWKSNYAYANWLET
                     TANKIKRSKDDSIEWHRKNEKEIPFWVITETWDFGALSKFYSLLNGQHQRKIAKKFNV
                     DENTLKNWLNEINIVRNLSAHHSRIWNRKFSDIAIPKLDDPRWSKFKKMQQYFSNLSL
                     DDKAKERIFGRVAILWFLVSQTSTNYHWLDKFEDLLNDFPNLPNTKVELMGFNREILE
                     KIK"
     gene            complement(732..1694)
                     /gene="hemH"
                     /locus_tag="PXE50_002466"
     CDS             complement(732..1694)
                     /gene="hemH"
                     /locus_tag="PXE50_002466"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HDL5623316.1"
                     /translation="MNQPQQIGILLANLGTPDEPTPSAVKRYLKQFLSDPRVIDLPKF
                     KWQAILNCIILPRRSPKVAKLYQSVWSEEGSPLLAISRQQQRAVQRYFDAKGKNVVVE
                     LGMSYGNPSIESATDNLIKQGVERIIVLPLYPQYSSTTTASVFDAFANGLKAQRKIVP
                     FDFIHSYHNDPLYIQALANSIDVKPDELLLFSFHGIPKRYETEGDFYAKHCQETAELV
                     AEKLGLPREKWYLSFQSRFGDEEWLQPYTDQTLESFPQKGIKKVAVVCPGFSADCLET
                     LEEITEENRENFEHAGGESYRYIPALNASGDHIKALVKLIEAKI"
     gene            1931..2065
                     /gene="rpmH"
                     /locus_tag="PXE50_002467"
     CDS             1931..2065
                     /gene="rpmH"
                     /locus_tag="PXE50_002467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HDL5623317.1"
                     /translation="MKRTFQPSVLKRARTHGFRARMATKNGRQVLARRRAKGRKSLSA
                     "
     gene            2101..2475
                     /gene="rnpA"
                     /locus_tag="PXE50_002468"
     CDS             2101..2475
                     /gene="rnpA"
                     /locus_tag="PXE50_002468"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HDL5623318.1"
                     /translation="MKKLNFSRELRLLAPVQFKAVFEEPLRASTPQMTLLARENNLEN
                     PRLGLTVAKKHLKRAHDRNRIKRIVRESFRLKQHELPNFDFVFVAKGGIGKLDNATLF
                     ETLEKLWSRHIRLSKKPAQQNP"
     gene            2424..2747
                     /gene="yidD"
                     /locus_tag="PXE50_002469"
     CDS             2424..2747
                     /gene="yidD"
                     /locus_tag="PXE50_002469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HDL5623319.1"
                     /translation="MVKTHSPEQKAGTTESINQPPRLSLLAKILLLPIYFYRYAISPL
                     IGPRCRFYPTCSTYAVEAIKIHGAIKGGYLAFKRILRCNPLSEGGEDPVPLCCKGNCK
                     HNDKK"
     gene            complement(2852..3193)
                     /gene="erpA"
                     /locus_tag="PXE50_002470"
     CDS             complement(2852..3193)
                     /gene="erpA"
                     /locus_tag="PXE50_002470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005706127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HDL5623320.1"
                     /translation="MSDIQIPLIFTDAAARKVKSLIEGEENPNLRLRVYITGGGCSGF
                     QYGFTFDDQVNEGDLTIENQSVGLVVDPMSLQYLIGGTVDYTEGLDGSRFVVNNPNAS
                     STCGCGSSFSI"
     gene            3342..>4417
                     /locus_tag="PXE50_002471"
     CDS             3342..>4417
                     /locus_tag="PXE50_002471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS O-antigen chain length determinant protein
                     WzzB"
                     /protein_id="HDL5623321.1"
                     /translation="MADSVKSHEQSSDEIDLIEIFRALWDKKWWIVITTFITTLLAGI
                     YAFTAKEQWTSKATVIAPKLTELGEYLNVRREYSRILRVDPVDPNALSASLFNNFNRL
                     AQSQDTKNEFFITSNVYKTLAEGKDEQGQRTVLSNLSNENTSFIIPDAKKDPNAIGRT
                     LSFSAETPMEAQDTLGKLVQFINSKAFAVELEDFLVDFQNVLTALQYEKSLIQEDLSV
                     NKSVQLENLNKAYETAQKAGIKEYSKAFNQSDASNIAAALSDTKISLSDSKLADSSYL
                     FMLGEKYLKAQIDVANEKGVVYPPRYYQIDYQLKQLEPLFEKTKTVKTQTFSYQASPD
                     YPVIKDKPKKVIILLIGAFIGLMIS"
BASE COUNT         1411 a          814 c          836 g         1356 t
ORIGIN      
        1 atattcgtaa tattatggct catgaattgg ggcgtgaaaa tcctttggct tatgaagatt
       61 attctctgat taatcaaaag ttcttaaaat ttcaatggaa atctaattat gcttatgcaa
      121 attggctaga aactacagct aataaaatta agcgtagtaa agatgattct attgaatggc
      181 atagaaaaaa tgagaaggaa atcccttttt gggtaattac tgaaacctgg gattttggtg
      241 cattatctaa gttttactca ttgttaaatg ggcaacacca aaggaaaatt gctaagaaat
      301 ttaatgtaga tgagaatacg ttaaagaatt ggttgaatga aataaacatt gtaagaaacc
      361 tttctgctca ccattctcgt atttggaaca gaaaatttag cgatattgct attcctaagc
      421 tagatgatcc tcgttggtcg aaatttaaaa aaatgcagca gtatttttca aacttatcgc
      481 tggatgacaa agcaaaggag agaattttcg gaagggtagc tattctgtgg tttttagtta
      541 gtcaaaccag cactaattac cattggttag ataagtttga agatttatta aatgacttcc
      601 ctaatttacc gaatacaaaa gtagaactga tgggatttaa cagagaaata ttagagaaaa
      661 ttaaataaaa taagtacatt cctatagggt gtagataaaa atgggcggat ttattatccg
      721 cccaaattat attatatttt cgcttcgatt aattttacta atgccttgat atgatcgcca
      781 ctcgcattta acgctggaat gtagcgataa gattctccgc cggcatgttc aaagttctcg
      841 cggttttctt ctgtaatttc ttctaaggtt tccaaacaat ctgctgaaaa gcccgggcaa
      901 acgacagcca ctttttttat ccctttttgt gggaagcttt caagggtttg atcggtataa
      961 ggctgtagcc actcttcatc accaaaacgg gactggaaag acaaatacca tttttctctt
     1021 ggcagaccta gcttttcagc cactaattct gctgtttctt ggcaatgctt ggcgtaaaaa
     1081 tcaccttccg tttcataacg tttaggaatg ccgtgaaatg aaaacagtaa taactcgtca
     1141 ggtttaacat caatagagtt agccaacgct tgaatataaa gcggatcgtt atgatagctg
     1201 tgaataaaat caaacggcac gattttacgc tgtgctttta aaccgttggc aaacgcatca
     1261 aacaccgaag cggtagtagt gctactgtat tgcggataaa gcggtagcac aataatccgc
     1321 tcaaccccct gcttgatgag gttatcggtc gcactttcaa tacttggatt gccgtaagac
     1381 attcccaatt ccaccaccac atttttgcct ttggcatcaa aatagcgttg taccgctcgt
     1441 tgttgttgcc gagaaatcgc caataacggt gagccttctt cgctccatac tgattgatat
     1501 aattttgcca cttttggcga acgtcttggc aaaatgatgc agtttaggat tgcttgccat
     1561 ttaaattttg gtagatcgat cacacgagga tcgcttaaaa attgctttaa ataacgcttc
     1621 accgcacttg gcgtgggttc atctggcgta cctaaattag ccagcaaaat acctatttgt
     1681 tggggttgat tcattgttct atttctcatc aatagttaat attttttcga ttatgccaca
     1741 aaccaatata aatttctgcg attataacaa gcggtcgtat ttttcaaaaa ttttgcaaac
     1801 aacccgagtt gtgcttggat tgtttcttgc tttttatttt aattgcctgt agaattgcaa
     1861 ctctttttta tggtccttgt ttggcagaaa ccattttatg ccaacttttt aaattttagg
     1921 tagataagca atgaaacgta catttcaacc atcagtatta aaacgtgctc gtactcacgg
     1981 tttccgtgct cgtatggcta ctaaaaacgg tcgtcaagtg ttagcgcgtc gtcgtgctaa
     2041 aggtcgtaaa tctttatctg cataattgca gaaccagcca aaacaccttt ctgattaagt
     2101 gtgaagaagc taaatttctc tcgggagcta cgtttgttag ctcccgttca atttaaggcg
     2161 gtgtttgaag agccacttcg agccagcaca ccccaaatga ctcttcttgc tagagagaat
     2221 aatctagaaa atcctcgtct aggcttaact gttgccaaaa aacatttaaa acgggctcac
     2281 gaccgtaatc gcattaagcg gatagtgcgt gaaagttttc gcctcaagca acacgaattg
     2341 ccgaatttcg attttgtatt tgtggcaaaa ggcggcattg gcaaattaga caacgcaacg
     2401 ctgtttgaaa cattggaaaa actatggtca agacacattc gcctgagcaa aaagccggca
     2461 caacagaatc cataaatcag ccacctcgtc tcagcctatt agccaaaatt ctattgctac
     2521 cgatttattt ctatcgctat gctatcagcc cattgattgg cccacgttgc cgattttacc
     2581 caacctgctc cacctatgcg gtcgaagcga ttaaaatcca cggagcaatt aaaggtgggt
     2641 atttagcgtt taagcgtatt ctgcgttgca accctttgag tgagggaggc gaagatcctg
     2701 tcccactttg ttgtaaaggc aactgcaaac ataatgataa aaaatagcct aaactcaata
     2761 agttaggcta ttttgtttaa tacaaacggt catttttagt aaaaaattta cttgtgagac
     2821 tgatattgaa taaggcaata attcgagtga attaaatgct aaaggaagaa ccacaaccac
     2881 aggttgagct tgcatttgga ttattcacga caaaacgtga gccgtccagc ccttcggtat
     2941 aatccaccgt gccaccaatt aaatattgta ggctcatcgg gtcaaccacc aagccaacgc
     3001 tttgattctc aatggtaagg tctccctcat tgacttgatc atcaaaggtg aacccatact
     3061 ggaatccact acagccccca cccgtaatat acacacgcaa gcgaagattc gggttctctt
     3121 cgccctcaat taagcttttt actttacgag ccgccgcatc agtaaagatt aaaggaattt
     3181 gaatatcgct cattttgttt tagatcaaaa ttttactgtg attggatatt atctaataat
     3241 tacataggaa gtgcaatctt aaaaaagagt aaatgaatgc agtggaaata agaaaattat
     3301 gtataatgct gtacagaaac atgcaaattt tagaggaaac tatggcagat tcagtaaaaa
     3361 gtcatgagca aagctcggat gagattgatt taattgagat ttttcgtgct ctatgggata
     3421 aaaaatggtg gattgttata acaacattca ttaccacatt acttgctggt atttatgcat
     3481 ttactgcaaa agagcaatgg acgtctaagg caacagttat tgcccctaaa ttaacagagt
     3541 taggtgagta tttaaatgtt cgcagagaat atagtcggat tttgcgtgta gatcctgttg
     3601 atccaaatgc attgtctgcg agtttgttca acaattttaa ccgattagca caatctcaag
     3661 atactaaaaa tgaatttttt atcacttcca atgtgtataa gacgttagct gaaggaaaag
     3721 atgagcaggg gcaacgcaca gttttatcca atttgagtaa tgaaaatacc agctttatta
     3781 ttcctgatgc aaagaaagat cctaatgcaa taggtcgtac actatctttt tctgcagaga
     3841 cacctatgga ggcgcaggac acccttggta agttggttca attcattaat agcaaagcat
     3901 ttgctgttga attagaagat tttctagtcg atttccaaaa tgtgcttact gcattacaat
     3961 atgaaaaatc attaattcag gaagatttat ctgtgaataa gtcggttcag ttggaaaact
     4021 taaataaagc ctatgaaact gcacaaaaag caggtattaa agaatattca aaagcattta
     4081 atcaatcaga tgcatcaaat attgcagcag ctttaagtga tactaaaatc tccctttctg
     4141 attcaaaatt agcagatagt tcatatttat ttatgttagg ggaaaaatac ctaaaggctc
     4201 aaattgatgt ggctaatgag aaaggtgttg tttatccacc acgttattat caaattgatt
     4261 accaacttaa acagctagag ccgttatttg aaaaaacaaa gacagttaaa acacaaactt
     4321 ttagttacca agcttcgccg gattatcctg taataaaaga taaacctaaa aaggtaatta
     4381 ttttattaat aggagctttt attggtttga tgatttc
//
LOCUS       DANLZQ010000146         4380 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.147, whole genome shotgun sequence.
ACCESSION   DANLZQ010000146 DANLZQ010000000
VERSION     DANLZQ010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4380)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4380)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4380
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.147"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            49..1155
                     /gene="recA"
                     /locus_tag="PXE50_002472"
     CDS             49..1155
                     /gene="recA"
                     /locus_tag="PXE50_002472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HDL5623322.1"
                     /translation="MAEKKSQKNTPVKQIDPEQKEKALAAALAQIEKQFGKGSIMKLG
                     DTQALDIEAVSTGSLGLDSALGIGGLPMGRIVEIYGPESSGKTTLTLSVVAQAQKNGK
                     TCAFIDAEHALDPIYARKLGVDTDGLLISQPDNGEQALEICDALVRSGAVDVIIVDSV
                     AALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKATNCLVIFINQIRMKIGVMFG
                     NPETTTGGNALKFYASVRLDIRRSGVVKDGDEVIGSETKVKIVKNKVAPPFREVQFDI
                     MYGEGIARMNELLILAESHGFINKAGAWFSYEGEKIGQGKNNAIKWLKEHPEVASKIE
                     QDIRNLLISNPTFTATPDSENADNADDEFSEEEL"
     gene            1214..1690
                     /gene="recX"
                     /locus_tag="PXE50_002473"
     CDS             1214..1690
                     /gene="recX"
                     /locus_tag="PXE50_002473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HDL5623323.1"
                     /translation="MTTSTTKTNKYTAVNYLLYLLSKRDYSEQELRQKLKQKEYELTE
                     IDAAIEKAQANQWQSDERFCTTFIRYRSMQGIGPRRLKQELKLKGVKDWLINQELENA
                     EVDWFELAEQIFEKKRPLVWDLKAKQKMWRFMVSRGFYNDHFSHLMALDYSSDEYE"
     gene            1683..1994
                     /locus_tag="PXE50_002474"
     CDS             1683..1994
                     /locus_tag="PXE50_002474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005724113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ASCH domain-containing protein"
                     /protein_id="HDL5623324.1"
                     /translation="MNREKITFFSRFEADILSGKKTITIRDKSESYFQPNQELAVFTN
                     ETDRFFANIKVLSVTPIVFDELNEQHAKQENMSLAELKQVIREIYPNDNAFFVIEFTL
                     I"
     gene            2004..2540
                     /locus_tag="PXE50_002475"
     CDS             2004..2540
                     /locus_tag="PXE50_002475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="topoisomerase DNA-binding C4 zinc finger
                     domain-containing protein"
                     /protein_id="HDL5623325.1"
                     /translation="MVLFKSTKQTETCPQCGSPLQIKQGKKGLFLGCSAYPECDYIKP
                     LHQAGHIIKQLDELCPECGGNLQLKQGNYGIFIGCSHYPECHFIVHEEAEVEEEFDCP
                     ECKQHKLIARKGRSGKIFYGCIGFPNCKFTLATRPINHLCEKCGCELATIKKIKGKQF
                     TICANKSCQHQTELKPNE"
     gene            2533..3087
                     /locus_tag="PXE50_002476"
     CDS             2533..3087
                     /locus_tag="PXE50_002476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sua5/YciO/YrdC/YwlC family protein"
                     /protein_id="HDL5623326.1"
                     /translation="MNNFLEIVNQLKQEEVVAYPTEAVFGLGCNPQSEKAVRKLLVLK
                     QRPEEKGLILLASDLKYLLPYIDEARMTEQAWQRLSHIGEQAITWIVPVKNTVPSYLT
                     GKFDSIAVRLCNVPAVVQLCEASGVALTSTSANLSGEPPCRNAKEVIDQFGQDFPVLH
                     ADTLGRENPSEIRDIFSQQIFRQG"
     gene            3094..3918
                     /gene="aroE"
                     /locus_tag="PXE50_002477"
     CDS             3094..3918
                     /gene="aroE"
                     /locus_tag="PXE50_002477"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005615478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HDL5623327.1"
                     /translation="MNRYAVWGNPIAQSKSPRIHQLFALQTQRNIEYIANLGDETAFE
                     QQLADFFASGAKGCNITAPFKERAFKLADEFSETALLAQACNTLKRLEDGRLYADNTD
                     GAGLVSDLERLGWLQKGHKTLILGAGGATKGVLLPLLKAGLEITLYNRTQEKAVVLAE
                     KFAKFGKIQTACLSDLANQLFNLIVNATSLGLQGKYVELPESVIASANIYDMQYAPNM
                     QTPFLNYARRCGATACQDGLGMLVGQAAFAFSLWEGQFPDVEPVLAQLKLEMQTVK"
     gene            4085..4161
                     /locus_tag="PXE50_002478"
     tRNA            4085..4161
                     /locus_tag="PXE50_002478"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4119..4121,aa:Met,seq:cat)
     gene            4164..4248
                     /locus_tag="PXE50_002479"
     tRNA            4164..4248
                     /locus_tag="PXE50_002479"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4198..4200,aa:Leu,seq:tag)
     gene            4274..4348
                     /locus_tag="PXE50_002480"
     tRNA            4274..4348
                     /locus_tag="PXE50_002480"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4306..4308,aa:Gln,seq:ttg)
BASE COUNT         1415 a          820 c          946 g         1199 t
ORIGIN      
        1 gcagcaacaa gcggttgctt ttagataaaa gtttacaaag gatagaatat ggcagagaaa
       61 aaaagtcaaa agaacactcc ggttaaacag attgatccgg aacaaaaaga aaaagcgttg
      121 gcagccgcat tagctcaaat tgaaaagcaa tttggcaaag gctcaattat gaagttaggc
      181 gatactcaag cccttgatat tgaagcagtt tcaaccggtt ctcttggttt agactcagca
      241 ttaggcattg gtggtttacc aatgggtcgt attgtggaaa tttatggacc ggagtcttca
      301 ggtaaaacta cattaacttt atctgtggtg gctcaagccc aaaaaaatgg taaaacttgt
      361 gcctttattg atgccgaaca cgcacttgat cctatttacg cccgtaagtt aggggtagat
      421 acagatggat tattaatttc acaaccggat aatggcgaac aagcattaga aatttgtgat
      481 gcgttagttc gttccggtgc ggttgatgta attattgtgg actctgttgc ggcacttaca
      541 ccaaaagcag agattgaagg cgatatgggt gattcccata tgggcttaca agctcgttta
      601 atgtcacaag cattgcgtaa attaaccgca aatatcaaag cgaccaactg cttggtgatt
      661 ttcattaacc aaattcgtat gaaaattgga gtaatgttcg gtaaccctga aaccacaact
      721 ggtggtaatg cccttaaatt ctatgcttca gtacgtttag atattcgtcg ttcaggcgta
      781 gtaaaagacg gtgatgaggt tatcggtagc gaaacaaaag tgaaaattgt gaaaaacaag
      841 gttgctccac cgttccgtga agtccaattt gatattatgt acggtgaggg cattgcccgt
      901 atgaatgaat tactcatttt agcggaatct cacggcttca ttaataaagc aggggcttgg
      961 ttctcttatg aaggggagaa aatcggtcag ggtaaaaata atgccatcaa atggttaaaa
     1021 gaacaccctg aagtggcgag taaaattgag caagatattc gaaatctact catttcaaac
     1081 ccaactttta cggctactcc agattctgaa aatgcagaca atgcagatga tgaatttagt
     1141 gaagaagaac tctaattaaa tttatgcggt tttcgctcaa cgtgaaaatc gcatttttat
     1201 ttataaccga taaatgacaa catctactac taaaacaaat aaatacacag cggttaatta
     1261 tctgctatat ttactttcaa agcgtgatta cagcgagcaa gagcttcggc aaaaactaaa
     1321 gcaaaaagag tatgaactca cggagattga tgcagcgatt gaaaaagctc aagcgaatca
     1381 gtggcaaagt gatgaacgct tttgtaccac ttttatccgt tatcgttcaa tgcaaggcat
     1441 tgggcctcgc cgtttaaagc aagagctaaa acttaaaggg gtaaaagatt ggttaattaa
     1501 ccaagaatta gaaaacgccg aagtggattg gtttgaatta gctgagcaaa tttttgagaa
     1561 aaaacgaccg cttgtatggg atctgaaagc aaagcagaaa atgtggcgat ttatggttag
     1621 ccgtggtttt tataacgatc attttagtca tttaatggct ctggattaca gtagcgatga
     1681 atatgaatag agagaaaatt acctttttca gccgatttga agccgatatt ttaagcggta
     1741 aaaaaacaat tacgattcga gacaagtcag aatcttattt tcaaccaaac caagaattag
     1801 cggtttttac taatgaaacc gatagatttt tcgccaatat taaagtgcta tcggtaacac
     1861 ctatagtgtt tgatgaatta aacgagcaac acgctaaaca agaaaatatg agcttagccg
     1921 aattgaaaca agttattcgg gagatttatc cgaatgacaa tgcgtttttt gtgattgaat
     1981 ttacgcttat ttagcaaatc aatatggtac ttttcaaatc aaccaaacag accgaaactt
     2041 gcccacaatg tggctcgccg ttgcaaatta agcagggcaa aaaagggtta tttttgggtt
     2101 gttcagctta ccctgaatgt gattatatta agccattaca tcaagccggt catattatta
     2161 agcaattaga tgaactttgc cctgaatgtg gcggaaacct ccaattaaaa caaggcaatt
     2221 atggtatttt tatcggctgt agccattacc ctgaatgcca cttcatcgta cacgaagaag
     2281 ctgaggttga agaagagttt gattgccctg aatgcaagca acataaactg attgctagaa
     2341 aagggcgttc aggcaaaata ttttatggtt gtataggctt ccctaattgc aaatttacat
     2401 tagcaactcg accgattaac cacttgtgtg aaaaatgtgg ttgtgaactc gctacaatca
     2461 aaaaaattaa gggcaagcaa ttcaccattt gtgctaacaa aagttgccag caccaaacag
     2521 aattaaaacc gaatgaataa ttttttagaa atagttaatc aattaaagca agaagaagtt
     2581 gtagcttacc caaccgaagc ggtttttggc ttaggctgca atccacaaag tgaaaaagcg
     2641 gtaaggaaat tactcgtatt aaaacaacgc cctgaggaaa aagggctaat tttactggct
     2701 tctgatttaa agtatcttct tccctatatt gatgaagctc gaatgacgga acaggcttgg
     2761 caacgcctaa gccatattgg cgagcaggca attacttgga tcgtaccggt taaaaatact
     2821 gtgccaagtt acctcaccgg caaatttgat tctattgccg tacgtttatg taatgtgccg
     2881 gcggtggttc agttgtgtga ggcaagcggc gttgcgttga cctctaccag tgccaatttg
     2941 agcggagaac caccttgccg caatgcaaaa gaagtcatcg atcagtttgg tcaagatttt
     3001 cctgtattac acgcagacac gctaggtaga gaaaaccctt ccgaaattcg agatattttc
     3061 agccaacaga tttttagaca aggataagcc gaaatgaacc gatatgccgt gtggggcaac
     3121 ccgattgctc aaagtaaatc cccccgtatt catcaactct ttgctttaca aacccaacgc
     3181 aacattgaat atatcgctaa cttaggagat gaaacggctt ttgagcaaca attagccgat
     3241 tttttcgctt ctggagcaaa aggttgcaac atcaccgccc cttttaaaga aagagccttt
     3301 aaattggcag atgaatttag cgaaaccgct ttgttggcac aggcgtgtaa tacgcttaaa
     3361 cgcttagaag atggacggtt atatgccgat aataccgacg gggccggttt agtttctgat
     3421 ttggaacggc taggttggtt acaaaaaggg cataaaacct taattcttgg agcaggtgga
     3481 gcaaccaaag gcgtattact tccgttactt aaagcggggt tagagattac tctatataac
     3541 cgcacgcagg agaaagcggt cgttttagcc gaaaaatttg caaaatttgg caaaattcag
     3601 accgcttgtt taagcgattt ggcaaaccaa ctgtttaatt taatcgtcaa tgccacctct
     3661 ctcggtctgc aaggcaaata tgttgaattg cctgaatctg ttatagcatc ggcgaatatt
     3721 tacgatatgc aatatgcccc caatatgcaa actccttttc tcaattatgc aaggcgttgt
     3781 ggagcaacag cgtgccaaga cggattagga atgttggttg gacaggcagc gtttgcgttt
     3841 tctttgtggg aagggcaatt ccccgatgtt gagcctgtac tggctcaatt aaaattagaa
     3901 atgcaaacgg tgaaatagca gaatataagc tattatttta taaacaaaaa atgctagatt
     3961 taagccaaaa cgacgaataa ctatacaagc gaatcaaaaa ttcaaatttt ttaaaaaaag
     4021 tatttgacgg aaagccctaa aatcagcata atgcactccg ttgaccgata tggtgaacgc
     4081 aaatggctac atagctcagc tggttagagc acaacactca taatgttggg gtcgcaagtt
     4141 cgaatctcgc tgtagccacc attgcgggac tggcgaaatt ggtagacgca ccagatttag
     4201 gttctggcgc cgcgaggtgt gtgggttcaa gtccctcgtc ccgcaccatt tatcgattaa
     4261 caaaaattag tgttggggta tcgccaagcg gtaaggcacc gggttttgat ctcggcatcc
     4321 ctaggttcga atcctagtac cccagccact taatttcaaa cattcaaatc tatataagct
//
LOCUS       DANLZQ010000147         4344 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.148, whole genome shotgun sequence.
ACCESSION   DANLZQ010000147 DANLZQ010000000
VERSION     DANLZQ010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4344)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4344)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4344
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.148"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            11..1219
                     /locus_tag="PXE50_002481"
     CDS             11..1219
                     /locus_tag="PXE50_002481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HDL5623328.1"
                     /translation="MSKNLILILNCGSSSLKFAILDPKTGDEKLSGLAEAFHLEDARI
                     KWKLNGEKGNADLGAGAAHSEALTFIAEKLLSDELKAGIGAIGHRIVHGGEKFTSSVV
                     ITDEVIKGIEDATQFAPLHNPAHLIGIKEAFRIFPELKDKNVAVFDTAFHQTMPEHAF
                     LYALPYTFYKENGIRRYGFHGTSHFYITSQVAELAGKSVEQTNAIICHLGNGGSVSVV
                     RNGKCIDTSMGLTPLEGLVMGTRSGDLDPAIISFLYNNLGMSMDEIDTTLVKKSGLLG
                     LTGVTSDCRYAEDNYNDVSKPEAKRALDVYSYRLAKYIGSYMAILGDDHLDAIAFTGG
                     IGENSGLVRELTLNHLKLFGIKLDQERNLAARFGKDGVITADESTFKAVVIPTNEELV
                     IAQDTAKLAL"
     gene            1272..3407
                     /gene="pta"
                     /locus_tag="PXE50_002482"
     CDS             1272..3407
                     /gene="pta"
                     /locus_tag="PXE50_002482"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005542370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HDL5623329.1"
                     /translation="MSRTIILIPISTGVGLTSVSLGLVHALEQKGSKVGFLKPISQPI
                     SGEDTLDRSTTIIRAEQTTEVGEPFMLSEAETLIGQNQTDVLLEKVVERHQKLSKNNE
                     IVIVEGLIPTRKNSYANSINYEMAQALDAEIVLVAAPASDTPAQLKERVEAAASQFGG
                     RNNPNLLGVIINKFNAPVDDSGRTRPDLTEIFDSFQHSNNNVSEVEHLFAKSPIKLLG
                     CISWKAELIATRAIDVAKHLGASIINEGEIKARRIRGVTFCARNLPNMVDHFKAGSLL
                     VTSADRPEVLVAASLAVMNGIEIGAILLTGGYKIDSSIAKLCQQAFETGVPVFRIEGN
                     TWQTALSLQSFSLEVPVDDKERIAAIKEYMASKFNVGFIDEVSKAATRARRLSPAAFR
                     YQLTEYARQAKKRIVLPEGDEPRTVKAAALCAERGIAECVLLANPTDVQRVAEAQGVV
                     LGKGVTIIDPASIRENYVDRLVELRKAKGMTEVVAREQLLDTVVLGTMMLEANEVDGL
                     VSGAVHTTANTIRPPMQIIKTAPGSSIVSSIFFMLLPDQVLVYGDCAVNPDPTAEQLA
                     EIAIQSAESAKAFGIDPRVAMISYSTGTSGSGADVEKVKEATRIAQEKRPDLIIDGPL
                     QYDAAIMEDVARSKAPNSPVAGKATVFVFPDLNTGNTTYKAVQRSADLVSIGPMLQGM
                     RKPVNDLSRGALVDDIVYTIALTAIQATQ"
     gene            3521..4201
                     /gene="can"
                     /locus_tag="PXE50_002483"
     CDS             3521..4201
                     /gene="can"
                     /locus_tag="PXE50_002483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonate dehydratase"
                     /protein_id="HDL5623330.1"
                     /translation="MEKIERLFANNHAWATKMKDEQSDYFKELAEHQKPTYLWIGCSD
                     SRVPAEKLTGLGPGELFVHRNVANMVIHTDLNCLSVVQYAVDVLEIEHIIICGHTNCG
                     GINAAIAQKELGLINNWLLHIRDIWFKHSHLLGKLPYEERSNVLTRLNVAEQVYNLGQ
                     SSIIKTAWEQGKSLSLHGWVYDVTDGFLIDQGVMATSRETLEITYRNAIAKITTEANE
                     KIVLNDEN"
BASE COUNT         1359 a          798 c          880 g         1307 t
ORIGIN      
        1 taatttgacc atgtctaaaa acttaatctt aatccttaac tgcggtagtt catctcttaa
       61 atttgctatt ttagatccta aaacaggtga tgaaaaatta tctggacttg ctgaagcttt
      121 tcatttagaa gatgcacgta tcaagtggaa gttaaacggg gagaaaggta atgctgattt
      181 aggtgcaggt gccgcacata gtgaagcact tacctttatt gctgaaaaat tgttatctga
      241 cgaattaaaa gcaggtatcg gcgcgattgg tcatcgtatt gttcatggcg gtgaaaaatt
      301 cacctcatca gttgtaatta ccgatgaagt gattaaaggt attgaagatg caacgcaatt
      361 tgcaccatta cacaaccctg cgcatttaat tggtattaaa gaagcattcc gcattttccc
      421 tgaattaaaa gacaaaaacg tagctgtatt tgacactgca ttccatcaga caatgccgga
      481 acacgcattc ttatatgcac ttccatatac attctataaa gaaaatggta ttcgtcgcta
      541 cggtttccat ggcacaagcc acttctatat cacctcacaa gttgcagaat tagcaggtaa
      601 gtctgttgag caaaccaatg ccattatttg ccacttaggt aacggtggtt ctgtttctgt
      661 tgtacgcaat ggtaaatgta ttgatacctc aatgggttta actccattag aaggtttagt
      721 aatgggtact cgctctggtg acttagaccc tgcgattatc tctttcttat acaataactt
      781 aggtatgtca atggacgaaa ttgatactac tctagtaaaa aaatctggtc ttttaggttt
      841 aactggcgta actagtgact gtcgttatgc ggaagataat tacaatgacg tatcaaaacc
      901 ggaagcaaaa cgtgctttag atgtatatag ctatcgttta gctaaatata ttggttcata
      961 tatggcaatt ttaggcgatg accacttaga tgctatcgca tttacaggtg gtatcggtga
     1021 aaattcaggc ttagtacgtg aattaacctt aaatcactta aaattatttg gcattaagtt
     1081 agatcaagag cgtaaccttg ctgcccgttt tggtaaagat ggagtcatta cagcggacga
     1141 gtcaacattt aaagctgttg ttatcccaac taatgaagaa ctcgtgattg cacaagatac
     1201 cgctaaatta gcattataat catagggggc agatattctg ccctttcact ttcttttaat
     1261 ttggaaatat tatgtctaga acgatcattc ttatccctat ttcaactggt gttggtttaa
     1321 ccagtgttag cttaggttta gtacatgctt tggagcaaaa aggttctaaa gtaggatttt
     1381 taaaaccgat ttctcaacct atcagcggtg aagatacgtt agaccgctca acaacgatta
     1441 tcagagcaga acaaacaaca gaggttggtg agccgtttat gttaagcgaa gctgaaacat
     1501 taatcggtca aaaccaaacg gatgtattgt tagaaaaagt ggtggaacgc caccaaaaat
     1561 tatcaaaaaa taatgaaatt gtcattgttg aaggtttaat tccaacgcgt aaaaactcat
     1621 acgctaacag cattaactat gaaatggctc aagcccttga tgctgaaatt gtattagttg
     1681 cagcaccggc ctcagataca ccagctcaat taaaagagcg agttgaagct gccgcttcac
     1741 aatttggtgg acgtaacaac ccaaatttac tgggcgttat tatcaataaa ttcaatgcac
     1801 cagtagatga ttcaggtaga acccgtccag atttgactga aatttttgat tcatttcaac
     1861 actcaaataa taatgtttca gaagtcgagc atctttttgc taaaagtcca attaagctgt
     1921 taggctgtat tagctggaaa gcagaactta ttgctacacg agcaattgat gttgcaaaac
     1981 atttaggcgc ttcaattatt aatgaaggcg aaataaaggc tcgtcggatt cgcggtgtga
     2041 cattctgtgc acgtaactta ccaaatatgg tcgatcattt taaagccggt agtttattag
     2101 ttacctctgc ggatcgtcct gaagtgttag ttgctgcatc gttggcggta atgaatggca
     2161 tcgaaattgg tgctatttta ctaaccggtg gttataaaat tgatagctca attgcaaaac
     2221 tttgccaaca agcatttgaa accggtgtgc ctgtattccg tattgaaggt aacacttggc
     2281 aaaccgcatt aagcctacaa agcttcagct tagaagtgcc tgtagatgat aaagagcgta
     2341 ttgctgcaat taaagaatat atggcaagca aatttaatgt aggtttcatt gatgaggttt
     2401 ctaaagccgc tactcgtgca agacgtttat cacctgcagc attccgttac caattaaccg
     2461 aatatgcccg tcaagcgaaa aaacgcattg ttttacctga aggagatgag cctcgtactg
     2521 tgaaagcggc tgcattatgt gctgagcgtg gcattgcaga atgtgtgtta ttagctaacc
     2581 caacagacgt acaacgtgtt gctgaagcac aaggcgtggt attaggtaaa ggcgtaacga
     2641 ttattgaccc tgcgagcatt cgtgaaaatt atgttgatcg cttagttgaa ttgcgtaaag
     2701 caaaaggaat gactgaagtt gttgctcgtg agcaactttt agatacagtt gtattgggta
     2761 caatgatgct tgaagctaat gaagtggacg gtttagtctc aggcgcagtt cacacaaccg
     2821 ctaacactat tcgcccacca atgcagatca ttaaaactgc accgggaagc tctattgtat
     2881 cttctatctt ctttatgcta ctacctgatc aagtattggt atatggtgac tgtgcggtaa
     2941 accctgaccc aactgcagaa cagctagcgg aaattgcgat tcaatcagca gaatctgcca
     3001 aagcctttgg tattgaccct cgtgttgcaa tgatctccta ctctaccggt acatcaggtt
     3061 caggtgcgga tgtagaaaaa gtgaaagaag caactcgtat tgcccaagaa aaacgtccag
     3121 atttaatcat tgatggccca ttacaatatg atgcggcgat tatggaagat gttgcccgct
     3181 caaaagcacc aaattcacct gtagcaggta aagcaactgt atttgtcttc ccggatttaa
     3241 atactggtaa taccacctat aaagcggtac aacgttcggc agatttagtc tctatcggcc
     3301 caatgttaca aggtatgcgt aaacctgtaa atgacttgtc ccgtggggct ttagttgacg
     3361 acatcgttta tactattgcg ttaactgcga ttcaagcaac gcaataattc cctcccaaat
     3421 gaaaccaaat gcccttaaaa ctaagggcat ttttattttt tacctacccg acttttcaat
     3481 ttaatcatat aatcaagatt agtgttaaaa aggagaattt atggaaaaaa ttgaacgctt
     3541 atttgccaat aaccacgcct gggcaactaa gatgaaagat gaacaatcgg attattttaa
     3601 agaattagcg gaacatcaaa agccaaccta tttatggatt ggctgttccg atagtcgtgt
     3661 gcctgctgaa aaactcacag ggttaggccc cggagaatta tttgttcatc gaaatgtagc
     3721 aaatatggtg attcacactg atcttaattg tctgtcggtt gttcaatatg cggtagatgt
     3781 attagaaatt gagcatatta ttatctgtgg tcacactaat tgtggtggta tcaatgcggc
     3841 aattgcacaa aaagaacttg gtttaattaa taactggttg ttacatattc gtgatatctg
     3901 gtttaaacac agccatttac taggcaaact tccctatgaa gagcgatcaa atgtcttgac
     3961 ccgattaaat gttgcagaac aagtttataa tttaggtcag tcctctatta ttaaaaccgc
     4021 ttgggaacag ggtaaatccc tctcgctaca cggttgggta tacgatgtta cagatggttt
     4081 cttgattgac caaggtgtta tggctactag ccgagaaaca ttagaaatta cctatcgtaa
     4141 tgcaatagct aaaataacaa ccgaagcaaa cgaaaaaata gttttaaacg atgaaaatta
     4201 gccattgtaa gcggttaaat ttatcgattt ttttacaatc tttttataaa aaaccattgt
     4261 ttgatggttt tttattttcc tgattcctgt tatcgtcaaa aaagttttaa atttcagcaa
     4321 aagtgtaaaa tattgattta aaaa
//
LOCUS       DANLZQ010000148         4306 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.149, whole genome shotgun sequence.
ACCESSION   DANLZQ010000148 DANLZQ010000000
VERSION     DANLZQ010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4306)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4306)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4306
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.149"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(47..122)
                     /locus_tag="PXE50_002484"
     tRNA            complement(47..122)
                     /locus_tag="PXE50_002484"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(87..89),aa:Asn,seq:gtt)
     gene            complement(238..987)
                     /gene="moeB"
                     /locus_tag="PXE50_002485"
     CDS             complement(238..987)
                     /gene="moeB"
                     /locus_tag="PXE50_002485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HDL5623331.1"
                     /translation="MELTDHEMLRYNRQIILKSVDFDGQEKLKASRVLIVGLGGLGCA
                     ASQYLASAGVGHLTLVDFDLVSLSNLQRQILHTDATIGQPKVESAKARLAAINPNIQI
                     ETINQRCSDEQLAKLIANVDLVLDCTDNVTVRNQLNLQCFKQKRPLVSGSAIRFEGQV
                     SVFCYQEQEPCYECLSRLFGDATLSCVEAGVIAPIVGIIGSIQALEAIKVLLNIGRTL
                     SGKLLMIDGLHFSVREMALPKQNNCPVCTSY"
     gene            complement(1086..2315)
                     /gene="moeA"
                     /locus_tag="PXE50_002486"
     CDS             complement(1086..2315)
                     /gene="moeA"
                     /locus_tag="PXE50_002486"
                     /EC_number="2.10.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HDL5623332.1"
                     /translation="MALLALSDALDNMLARLSTPKLVEQLPLNECANRVLAEDIFSPI
                     NVPNFDNSAMDGYAVRISDLAQNLTLNVAGKAFAGNPFNGEIKAGECVRIMTGALVPK
                     GVDAVVMQEETTLNSDGSVTFNHIPKLGSNIRRIGEDVKQGALVLKKGSLLNVASLPL
                     LASLGIASVPVFVKLKVAILSTGDELTSVGEPLSEGKIYDTNRFAVRLMLEKLNCEIL
                     DFGILPDDPILFEQTFRQAQQQADVLITSGGVSVGEADFTKDVLEKLGEIGFWKIAMK
                     PGKPFAFGKLEQAWFFGLPGNPVSALVTFYQLAQPALAKLSGLSTDKIAKLTQNLTAC
                     SAGKLKKAVGRQDFQRGYYYANEKGELEVRAVGTQGSHIFSAFNESNCFIVLEAERGN
                     VDAGEKVTIQPFNSLMY"
     gene            complement(2337..2954)
                     /locus_tag="PXE50_002487"
     CDS             complement(2337..2954)
                     /locus_tag="PXE50_002487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006719828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HDL5623333.1"
                     /translation="MFDSLAVQFVVLWAVIDPIGSVPVYLAKTIGLPIEARRKIALNA
                     VLIAAGILIFFLIGGQVLLESMQIPLPAFQAAGGLVLLLFALTMIFGESKPEQEMRIS
                     SNLNELAVYPLAVPSIASPGAMMAIVLLTDNHRFHIGDQIITAGIMLLVLFITYLLLL
                     AANRIQHLIGNAGAAIISRVMGLILAAIAVNNLLIGVRDFFVQIS"
     gene            complement(3022..4233)
                     /locus_tag="PXE50_002488"
     CDS             complement(3022..4233)
                     /locus_tag="PXE50_002488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDL5623334.1"
                     /translation="MISRQMQSLLKRLVAQFPAVLVTGARQVGKSTLLQHIGEGYQYI
                     TFDDPMLLELAKQESRLFFLNHQGKLILDEVQYVPEIFALLKLEIDKKQQNGLFLLSG
                     SQAFELMQNVSETLAGRIAILKLQGLSLREILGVKFDQPFLPTTDYLLAREQELKSPE
                     NIWQLIHKGDMPRLYAQEVDWEIYYRSYVATYIERDVRQLTNIASTTDFTRFMVSIAS
                     RSGELLNYSNIAQEVGVSNETIKRWVAILQTSGIIYLLQPYHNNHLKRAIKTPKVYFL
                     DTGLMAYLTKWLTPETIAQGAKSWQFFETFVVSQIIKSFHNQGIEPPIYFYRDTNQKE
                     IDLIIEYDRTLYPIEIKVTASPTKKMAKSFDLLNSVSSEWKLGQGAIINQYPTKLYLS
                     ENLVALPVSYL"
BASE COUNT         1320 a          996 c          787 g         1203 t
ORIGIN      
        1 tataaaagga gacaaataaa acaagaacaa aagaaaaata aaatcttggc tcctcctgcg
       61 ggactcgaac ctgcgacata tggattaaca gtccaccgtt ctaccgactg aactaaggag
      121 gaattaacgg tgtaaataat aggctaaaac gttttagccg tcaaataaaa aaaataaact
      181 gtcgttcatt ttttacattt cttgacattt tttcgccaat aagtatgaga aaaatactta
      241 ataagaggta caaaccggac agttattttg cttaggtaat gccatttctc tgacagaaaa
      301 atgcaagccg tcaatcatta acaattttcc ggaaagagtt ctgccgatat taagtagcac
      361 tttaattgct tccaacgctt gaatactgcc tatgatgcca acaatcggag caatgacccc
      421 cgcttcaaca caacttaaag tcgcatcacc aaacaacctg cttaaacatt catagcacgg
      481 ttcttgttct tgataacaaa atacactcac ctgcccttca aatcgaattg ccgaaccgga
      541 aacaagcggt cgtttttgct taaaacattg caaatttaac tgattacgca cagtaacgtt
      601 atcggtacaa tccagcacta aatctacatt tgcaatcagc ttggctaact gctcatcgga
      661 acatcgctga ttgatagttt caatctgaat gttcggatta atcgccgcta atcgagcttt
      721 ggcagattcc acctttggct gcccgatagt cgcatcggta tgtaaaattt ggcgttgcag
      781 attagaaagt gagaccagat caaaatccac caaagtcaaa tgcccaacgc cggcagaagc
      841 taagtattgc gatgccgcac agcccaaacc acctaaaccg acaatcaaca ctcggctggc
      901 ttttaacttt tcctgcccgt caaaatccac gctttttagg ataatctggc gattataacg
      961 tagcatttcg tgatcggtaa gttccatttt tacacctaaa gagtaaacga tggcgcaagc
     1021 gtccacgctt gtgcctatat ttttattgct agcacaagcg tggacgcttg cgctatctta
     1081 attcattaat acatcagcga attaaacggc tgaatagtga ctttttcccc agcatcaaca
     1141 ttgcctcgtt ctgcttctag cacaataaaa cagttacttt cattaaaagc gctgaaaata
     1201 tgtgagcctt gcgtgccaac tgcacgaact tctaactcac ctttttcatt ggcatagtaa
     1261 tagccccgtt ggaaatcttg gcgaccgacc gcttttttca attttccggc actgcaagcg
     1321 gttagatttt gggttaattt tgcaatttta tctgtcgata aacccgaaag tttggctaac
     1381 gccggttgcg ctaattggta gaaagtcact aatgcagaga cagggttgcc cggcagccca
     1441 aaaaaccaag cctgttctaa tttaccgaat gcaaaaggct tgcccggctt catcgcaatt
     1501 ttccagaaac cgatttcgcc taatttttcc agtacatctt tggtaaaatc tgcctctccc
     1561 acagatacgc cgccactggt aatcaacaca tcggcttgct gttgggcttg cctgaaagtt
     1621 tgctcaaaca gaattgggtc atcaggcaaa atcccaaaat ctaaaatctc gcagttgagt
     1681 ttttccagca ttaaacgcac cgcaaaacgg ttggtgtcgt aaatttttcc ctcactcaaa
     1741 ggctcgccaa ctgaggttaa ttcatcgccg gttgaaagaa ttgccacttt taattttaca
     1801 aaaacaggca cagaagcaat accgagtgaa gctagcaacg gtaaactggc tacattcaat
     1861 aatgagcctt ttttcaagac caatgccccc tgtttaacat cttccccaat gcggcgaatg
     1921 ttactgccta attttggaat atggttaaag gttacagagc catcggaatt taacgtagtt
     1981 tcctcttgca ttacaacggc atcaacgccc tttggcacta atgctcccgt cataatccgc
     2041 acgcattcgc ctgcctttat ttcgccgtta aacgggttac cggcaaaggc tttaccagcc
     2101 acattcaagg ttaaattttg tgctaaatct gaaatacgaa ccgcgtagcc gtccatcgcc
     2161 gaattatcaa aattcggtac attaatcggg gaaaaaatat cctctgccaa cactcggtta
     2221 gcacactcat ttaacggaag ttgttccacc aatttaggtg tcgataaacg agcaagcata
     2281 ttatctaacg catcactcaa agccaaaagt gccataattt cctacctatt caacgtttag
     2341 ctaatttgta caaagaaatc ccgtacgcca atcaacagat tattcaccgc aatcgcagcc
     2401 agaattaacc ccatcactcg gctgataatc gcagcccctg cattaccaat aaggtgctga
     2461 atacggtttg ccgctaatag caacaaatag gtaataaaga gtaccaaaag cataatgccg
     2521 gcggtgataa tttgatcgcc gatatgaaaa cggtgattgt cggttaataa tacgattgcc
     2581 atcatcgccc cgggagaagc aatcgacggt acagctagcg gataaaccgc caattcattc
     2641 agattactgc tgatccgcat ttcttgctcg ggcttgcttt cgccaaaaat catcgttaaa
     2701 gcaaataaca acagcactaa gccgcctgcc gcttggaatg caggtaacgg aatctgcatt
     2761 gattctaaca gcacttgccc accgataagg aagaaaatca aaataccggc ggcaatcaag
     2821 accgcattta gtgcaatttt acgccgtgct tcaatcggca aaccaatggt ttttgccaaa
     2881 taaacaggaa cagaaccaat cgggtcgatc accgcccata aaaccacaaa ttgtaccgct
     2941 aatgaatcaa acatattctc tcctgttatc ttgataattt gcaaaatttt agcataaaac
     3001 aaccgcttgc acggcttttt cttacagata gctcaccggt aacgctacca aattttcact
     3061 taaataaagt ttggtcggat attggttaat aatcgctccc tgccctaatt tccattcact
     3121 agaaactgag tttagcaagt caaaactttt tgccattttt ttggttgggc ttgccgtgac
     3181 cttaatttct atcggataaa gcgtgcgatc atattcaata attaagtcga tctctttctg
     3241 gttagtatca cggtaaaaat aaatcggcgg ctcaattcct tgattatgaa aggattttat
     3301 aatttggctt accacaaagg tttcaaagaa ctgccagctt tttgcccctt gagcaatagt
     3361 ttcgggggta agccatttgg ttaaatacgc cattaacccg gtgtctagaa aatacacttt
     3421 tggggtctta attgcccgtt tcaaatgatt gttgtggtat ggctggagca aatagataat
     3481 gccggaagtc tgcaaaatgg cgacccaacg tttaatcgtt tcattcgata ctccaacttc
     3541 ttgagcaata ttactgtaat tgagtagctc accactacga gaggcaatag agaccataaa
     3601 acgggtaaaa tccgttgtgc tggcaatatt ggttaattgg cgaacatctc gctcaatgta
     3661 ggtcgctaca taagagcgat aataaatctc ccaatccacc tcttgtgcat ataaacgagg
     3721 catatcgcct ttatggataa gctgccagat gttctccggt gattttaatt cttgctcccg
     3781 agctaacaaa tagtcggttg tcggtaaaaa aggttgatcg aacttcaccc ctaaaatttc
     3841 acgcaacgaa agcccttgta attttaaaat agcaatacga ccggcaagtg tttcactcac
     3901 attctgcatt aattcaaagg cttgcgaccc cgaaagtaaa aacaaaccgt tttgctgttt
     3961 tttatcaatt tctaacttta ataacgcaaa aatttcaggc acatactgta cttcgtctaa
     4021 aataagcttg ccttgatggt ttaaaaaaaa caggcgagat tcttgtttag ccagctccag
     4081 caacattggg tcatcaaaag taatatattg atagccctca ccaatatgtt gtaacaatgt
     4141 cgatttacca acctgtcttg cccctgtcac taaaacggca ggaaattgcg ccacgagtcg
     4201 ttttaacagc gattgcattt gccgagaaat catttttcct ccaaaatagc ctaaatcaag
     4261 tttaacctca tatataatgt tgaattaaac ttaatttaaa ttattt
//
LOCUS       DANLZQ010000149         4172 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.150, whole genome shotgun sequence.
ACCESSION   DANLZQ010000149 DANLZQ010000000
VERSION     DANLZQ010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4172)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4172)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4172
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.150"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(<1..1083)
                     /locus_tag="PXE50_002489"
     CDS             complement(<1..1083)
                     /locus_tag="PXE50_002489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDL5623335.1"
                     /translation="MGIMSKSISIFNHKGGIAKTTTAFNVGWSLANQGYQVLLVDLDS
                     QCNLTGLVLGYDQCKEDSDLALFYNNRHHLTMEGIVEALINGQSPDNYLSGNVGQITQ
                     TLNPNLFLLPGHLNVSELDSQISVSLKIAAGVPATRNIPGNLPTLIKKVAEQNNIDYI
                     LYDLSPNVGGLNEVILMSSDYFIVPTSPDFFCWQAVGSLAKNIRKWHNELKAFKELNG
                     FNQSSYAIKNKPQFLGTIQQRYRPRKGQPAKSFEKWIERIRNEVITNFVPVLKTIDCA
                     IDDTAIYAALKSTNSDLEPFDLAHIADFNSLIAISQELRVPVFSLTKEQIKNSGQFGH
                     ALNTMDESKENFDQEFQSLAERIIQLT"
     gene            complement(1148..1579)
                     /locus_tag="PXE50_002490"
     CDS             complement(1148..1579)
                     /locus_tag="PXE50_002490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623336.1"
                     /translation="MKKMAIVALSAFFSMNAFANNNVVYSCTTTDNQTLKVTKEGGNY
                     VYSHGNTTFKNPVKEALKNPASEIAGGSQFTTISLELRNAGKSYIVGHIEADPKSPFE
                     ASVQIQDIKTGNDITSFECRSDKPIRHNFDRKLMRKSGFAA"
     gene            complement(1583..3685)
                     /locus_tag="PXE50_002491"
     CDS             complement(1583..3685)
                     /locus_tag="PXE50_002491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrating conjugative element protein"
                     /protein_id="HDL5623337.1"
                     /translation="MKKAKSLKFLTACIMLTTMSGYANSNTVNVGNSISNFIENTTGY
                     RTGNLGVSGNNALTEYYPVLSDYMHYSIGGGSAISAPASHGRPNQYGIGIGWKSNLTC
                     GNFDIKLSIKNQLNGITEGFKDLYGNIIESATGAVASLPAMIIQRANPQLYDILSNGL
                     YQGKLDFNNFKTSCEAMSNQLADLAMDSKLAKMAGLHRAAEIAETEPDAMAAKKKMDK
                     KDAEKGIPWVGGEQRGGKNQKPMAIVADIVGAGYNLALGRGPLEKGDIPIASCDGMLC
                     TEWKNPSEAAAYASEVIGETFLDACETCEQSSSGAKAGKGIAHFIEQTTIEKATKLEA
                     ALNHLDSLTPEQLNSLSTSTVSVTKGVLEAIAASPDAALLGARLSQELAISKEMEKLL
                     LIRRAMLAGMREPNVIKSSLVEEAERNLKLLDREIEQVKLEMELQRSINGNTALAAIT
                     QQMNEQALAIDDNAMGDGNRRFANLSNQAGANNLNTSGIANSAQNAVGDRYIAIPKSD
                     GSGMSDFYGAYKASPTNIVSNVNVGSYTQIAQMNGNANEQATALIKQFEGYLSHGKWD
                     VNANRAGYGSDTYTTADGMVHRVQKGTYVSREDAERDLARRMPQFMNVARGNVGADVW
                     AKLTPQAQAALTSVSYNYGSLSKLESVQKAAAVSAQSGDMTALANSIRNLQGHNNGVN
                     ARRRNQEADYIINAPKGN"
     gene            complement(3712..3990)
                     /locus_tag="PXE50_002492"
     CDS             complement(3712..3990)
                     /locus_tag="PXE50_002492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HDL5623338.1"
                     /translation="MQAKTFYYLPLLLLSAMASASPANKPSDVTVKVFTSESYPKVFP
                     HSGDWATHSDSFSNTENYSWALWRPYSCCKKQGQVFLGHVDWKSTHTH"
BASE COUNT         1158 a          823 c          798 g         1393 t
ORIGIN      
        1 agtcagttgt ataattcgtt ctgctaatga ttgaaattct tggtcaaaat tttctttact
       61 ttcatccatt gtattcaaag catgtccaaa ttgacctgag tttttaattt gctcttttgt
      121 taaggaaaat acgggaactc gtagctcttg gctaatagca atcaacgaat taaagtcggc
      181 tatgtgagcc aaatcaaatg gctctaagtc agaattcgtt gatttaagag cagcataaat
      241 agctgtatca tcaatagcac aatcaatagt ttttaatacc ggcacaaaat tcgtaatgac
      301 ttcatttcta attcgctcaa tccatttttc aaatgatttg gccggttgcc cttttcttgg
      361 tcgataacgt tgctgaatag tacctaaaaa ttgtggctta tttttaattg cataagatga
      421 ttggttaaaa ccattaagtt ctttaaatgc ttttaactca ttatgccatt tgcgaatatt
      481 tttagcgagc gaaccaactg cttgccagca gaaaaaatca ggtgatgtag gtacaataaa
      541 gtaatcacta gacattagga taacttcatt taatccaccc acatttggac taagatcata
      601 gagtatgtaa tcaatattgt tttgttcagc tactttctta attaaagtcg gaagattgcc
      661 gggtatattt cttgttgctg gaacaccggc agcaattttt aatgatacac taatttgcga
      721 atcaagctcg gaaacattaa ggtgaccagg taacaagaac agatttggat tcagggtttg
      781 agtgatttgg ccaacatttc cactaaggta gttatcaggg ctttgtccgt ttatcagtgc
      841 ttcaacaata ccttccatag tcaaatgatg tctattattg taaaaaagcg ctaaatcact
      901 atcttctttg cattgatcgt agccaagtac cagaccggtt aggttacatt gtgaatccaa
      961 atcgactaac aatacttgat agccttgatt tgctaaactc caaccaacat taaatgcagt
     1021 tgtagtttta gcaatacctc ctttatgatt aaaaatactg atagacttac tcataatacc
     1081 cataattcta tgaaataatt aacccaccga actcatttga gaatggtggg ttaatgcttt
     1141 gctttagcta ggctgcaaat ccagattttc tcatcagttt gcgatcaaag ttgtggcgaa
     1201 taggcttatc ggaacgacat tcaaatgatg taatatcatt tcctgtttta atatcctgaa
     1261 tctgaacact tgcttcaaaa ggtgatttag ggtctgcttc tatatgacct acaatataag
     1321 attttcctgc atttcttaat tcgagcgaga ttgttgtgaa ttgtgaacca cctgcaatct
     1381 ccgatgccgg atttttgaga gcttctttta caggattttt gaatgtggta ttaccgtgag
     1441 agtacacata gtttcccccc tctttggtaa cttttaacgt ttggttatct gtagttgtgc
     1501 aagaatacac tacattgtta tttgcaaaag cattcattga gaaaaatgct gataaagcta
     1561 caattgccat ttttttcata ggttagtttc cttttggtgc gttgataatg taatcggctt
     1621 cctggttacg tcttcgagca ttaacaccat tattatgccc ttgtaaattt cggattgagt
     1681 tagctaaagc cgtcatatca cctgattgtg cggagacggc agccgctttt tgaacacttt
     1741 ctagtttaga taatgaccca tagttgtatg ataccgacgt taatgctgct tgtgcttgag
     1801 gagtcaattt agcccaaacg tcggcaccaa cattacccct tgcaacattc ataaattgag
     1861 gcattcttcg tgctaaatca cgttcagcat cttcccggct tacataagtg cctttttgaa
     1921 cccgatgaac cataccatct gcagtagtat aggtgtcaga gccatatccg gcacggttag
     1981 catttacatc ccatttcccg tggcttaaat atccttcaaa ctgtttgata agagccgttg
     2041 cttgttcatt cgcattgccg ttcatttggg caatttgggt atagctccct acattcacgt
     2101 tactgacaat gtttgttggg gaggctttat atgctccata aaaatcactc atgcctgagc
     2161 cgtctgattt ggggatagca atatatctat cgccaacggc attttgtgca gaattagcaa
     2221 tgccactggt gttgagatta tttgctccgg cttgattgct taaattggca aagcgacggt
     2281 ttccatcacc catcgcatta tcatcaatag caagagcttg ttcgttcatc tgttgagtaa
     2341 ttgcagctaa tgctgtatta ccgttgattg aacgttgcag ttccatttcg agtttaactt
     2401 gctcaatttc tctgtcaagt aatttgaggt ttctttctgc ttcttctact aaggaagatt
     2461 ttataacatt tggctcacgc ataccggcta acattgctcg gcgaatcagt agcaattttt
     2521 ccatttcttt agaaatagct aattcttgcg ataaccttgc acccagcaag gctgcatccg
     2581 gcgaagcagc aatggcttct aatacgcctt ttgttacact gaccgttgat gtactcagtg
     2641 aattgagttg ttccggcgtt aaactatcta agtgattcag tgccgcttct agctttgtgg
     2701 ctttttcaat agttgtttgt tcaataaaat gggcgattcc tttcccggct ttagctccac
     2761 ttgaactttg ttcacaagtt tcacaggcat caaggaatgt ttcaccaatc acttcacttg
     2821 cataggcagc agcctcgctt ggatttttcc attccgtaca aagcatacca tcacagcttg
     2881 caataggtat atctcctttt tctaatggtc ctcgtcctaa agcgaggtta tatccggctc
     2941 caacaatgtc agcaacgata gccattggtt tttgattttt accaccacgt tgttcgccac
     3001 ctacccaagg gatgcctttt tcagcatctt ttttatccat tttcttcttg gctgccattg
     3061 catcaggctc tgtttcagca atttcagcgg ctcggtgtaa tccggccatc tttgctaatt
     3121 tactgtccat tgctaaatca gcaagttggt tagacatggc ttcgcaactg gttttgaagt
     3181 tgttgaagtc aagttttcct tgatatagac cattagaaag aatgtcatac agttgaggat
     3241 ttgctcgttg gataatcatc gccgggaggc tggcaactgc accggttgct gactcaataa
     3301 tattgccata aagatcttta aaaccttcag taataccatt aagctggttt ttaatggaaa
     3361 gtttaatatc aaagttgcca caagttaaat tcgatttcca gccaatgcca atcccatatt
     3421 gatttggtct gccatgggaa gctggtgcgg aaatggcact acctcctcca atggagtagt
     3481 gcatataatc agaaaggaca gggtagtatt ccgtgagagc gttattacca gaaacgccta
     3541 gattaccagt cctatagcct gttgtatttt caataaaatt actaatgcta ttgccaacat
     3601 taacggtatt actatttgcg tatccgctca tggttgtgag cattatacaa gcggttagaa
     3661 atttgagact ttttgctttt ttcatttatt tatcctaata gtgctgataa tttaatgagt
     3721 atgtgtactt ttccagtcca catgacctaa aaaaacttgc ccttgttttt tacagcaaga
     3781 atagggcctc cataatgccc agctgtaatt ctcagtattg gagaaactat ctgaatgggt
     3841 agcccaatca ccactgtgcg gaaagacttt agggtaggat tcggaagtaa ataccttaac
     3901 tgttacatct gagggtttat tagcaggact agcacttgcc atagctgaaa gcagtagtag
     3961 tggtaaatag taaaatgtct tagcttgcat aaatgctcca caaatagagt aattcacgtt
     4021 taccttaaaa gatgatttgg ttagaagaaa tcggaaattg ttttttggtt ttggagagtt
     4081 tttgttagta tataagttaa tgtaacaagg gagagtggat gtatgagcaa tagaatacct
     4141 aaagcctgtt atgcttaccc aaaatcgccg aa
//
LOCUS       DANLZQ010000150         4127 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.151, whole genome shotgun sequence.
ACCESSION   DANLZQ010000150 DANLZQ010000000
VERSION     DANLZQ010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4127)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4127)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4127
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.151"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(230..1870)
                     /gene="pgi"
                     /locus_tag="PXE50_002493"
     CDS             complement(230..1870)
                     /gene="pgi"
                     /locus_tag="PXE50_002493"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013527751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HDL5623339.1"
                     /translation="MQKINPVQTFAWNALEQHKADNLSIPQLFAEDPNRFDKYSLRFE
                     DQLLVDFSKNAINEKTLTLLRQLANECGLESAKNAMFSGKKINRTENRAVLHVALRNR
                     ANTPIAVDGKDVMPEVNAVLAKMKDFCERVISGEWKGYTGKTITDVINIGIGGSDLGP
                     YMVTEALRPYKNHLNMHFVSNVDGTHIAEVLRKVNPETTLVLVASKTFTTQETMTNAL
                     SARKWLLDSAKDESAVAKHFVALSTNAKEVEKFGIDTANMFEFWDWVGGRYSLWSAIG
                     LSIALSLGFENFEQLLAGAHAMDKHFLITPIEKNIPTTLALVGIWNNNFLGAESEAIL
                     PYDQYMHRFAAYFQQGNMESNGKFVGRDGKPVTHQTGPIIWGEPGTNGQHAFYQLIHQ
                     GTKLIPCDFIAPAQTHNPLSDHHNKLLSNFFAQTEALAFGKSKETVEKEFLDAGKTLE
                     EVAEIVPFKVFSGNKPTNSILVQKITPYSLGALIAMYEHKIFVQGVLFNIYSFDQWGV
                     ELGKQLANRILPELETDEKINSHDSSTNGLINQFKAWR"
     gene            complement(1903..2151)
                     /locus_tag="PXE50_002494"
     CDS             complement(1903..2151)
                     /locus_tag="PXE50_002494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HDL5623340.1"
                     /translation="MLTPKNLEAIAQQLHNALPQSLKNVGNDLDEKFKQILQAQLARL
                     DVVTREEFDVQSQVLLRTREKLTELEKRLDELTQRTDE"
     regulatory      2275..2319
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00522"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="PreQ1 riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="preQ1"
                     /db_xref="RFAM:RF00522"
     gene            2323..2991
                     /gene="queC"
                     /locus_tag="PXE50_002495"
     CDS             2323..2991
                     /gene="queC"
                     /locus_tag="PXE50_002495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HDL5623341.1"
                     /translation="MTHQKPKAVVIFSGGQDSTTCLFQAIAEFGKENVEVVTFQYGQR
                     HSIELEKARWISNDLGVKQTLIDTSVIKAITTNALMDNNAEIQQQGSTPNTFVDGRNA
                     LFLLYTAIYAKGQGIQTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTP
                     LMYLTKKETWALADKLGAFDYIRDHTHTCYLGVEGGCHDCPSCVLREKGLNEYLAERE
                     VSNV"
     gene            2984..3406
                     /gene="queD"
                     /locus_tag="PXE50_002496"
     CDS             2984..3406
                     /gene="queD"
                     /locus_tag="PXE50_002496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HDL5623342.1"
                     /translation="MFKIAKEFSFDMAHMLDGHDGKCQNLHGHTYKLQVEVAGELFQE
                     GAKRGMVMDYSDLKAVVKQHILEPMDHAFIYDLQSERESQVAQLLIDLNSKVYGIPTR
                     TTAEEMAKYMFEKLEKVGLPVSLIRLWETPTSYCEYSK"
     gene            3406..4032
                     /locus_tag="PXE50_002497"
     CDS             3406..4032
                     /locus_tag="PXE50_002497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HDL5623343.1"
                     /translation="MAELISNPRFPIVEIFESLQGEGFNTGMPAIFVRFGKCNLTCPW
                     CDTNYNQFEQWTLSDILAKVRSYSAKNVIITGGEPTIQPNLSLLLEQFKKEGYFLAIE
                     TNGLKEVPAQIDYIATSPKRMYQEKYQRRCIEFANEVRIVVDGEVQGFCEQIESQIKA
                     EHYYLSPCEVEGKMNLLETITQIGLLNQRPNKPKWQLSIQTHKIVGIE"
BASE COUNT         1253 a          757 c          875 g         1242 t
ORIGIN      
        1 tgagtgaaga gtagaggtaa aatagtaagc ctttttaacc agtttattta ttgtacctat
       61 tttagaaaaa agaaaagtag aaaagagata ttaggtaaac tcatagtgca aaagaatata
      121 gaaaaaactg cttgtgtaga aatggcgctt agttcagtcc tcagctaaaa ttttagaaaa
      181 aaagcataga gattttttac ctctatgctt tttattgtat tgactatatt taacgccaag
      241 ccttgaattg gttaattaaa ccatttgtgg agctgtcgtg gctgttgatt ttttcatcgg
      301 tttcgagttc gggtaaaatg cggtttgcaa gctgtttgcc taactccacg ccccattggt
      361 cgaaactgta aatgttgaac agcacgcctt gcacgaagat tttgtgttca tacattgcaa
      421 ttaatgcccc taagctgtac ggggtgattt tttgcaccaa gatagagttg gtcggtttgt
      481 ttccgctgaa cactttaaac ggcacgattt cagctacttc ttccaacgtt ttacctgcat
      541 ctaaaaactc tttttcaact gtttcttttg atttaccgaa agctagtgct tcagtttgag
      601 caaagaagtt agaaagcagt ttgttgtgat gatcgcttaa cggattgtga gtttgtgccg
      661 gtgcgataaa atcacaagga attaattttg tgccttgatg aatgagttga tagaatgcgt
      721 gctgaccgtt agttcccggt tcgccccaaa taatcggacc tgtttggtga gtaaccggtt
      781 tgccgtcacg ccccacaaat ttaccgtttg attccatatt gccttgttgg aaataagccg
      841 caaagcggtg catatattgg tcgtaaggta aaatcgcttc tgattcagca cctaagaaat
      901 tgttattcca aatgccgact aaagctaacg tagttggaat gtttttctca atcggcgtga
      961 ttaagaaatg cttatccatt gcgtgagcac cagcaagtag ctgctcgaag ttctcaaaac
     1021 ctaatgaaag ggcaatcgaa agcccgatgg cagaccataa tgagtaacga ccgccaaccc
     1081 aatcccagaa ttcaaacata ttagcggtat caataccgaa tttttccact tctttggcat
     1141 tggttgaaag tgccacgaaa tgttttgcta ccgcagattc atctttggca gaatcaagta
     1201 gccatttgcg agctgaaagg gcattggtca tcgtttcttg agtggtaaag gtttttgaag
     1261 ccactaacac taacgtggtt tcaggattaa ctttacgcaa cacttcagca atatgcgtgc
     1321 cgtccacgtt agacacaaag tgcatattaa ggtgattttt ataagggcgt aatgcctctg
     1381 ttaccatata aggacctaga tccgagccac caataccgat attgatcaca tcagtaatcg
     1441 ttttgccggt atagcctttc cattcgccgg aaataacacg ctcgcagaaa tctttcattt
     1501 tcgctaacac ggcattcact tccggcatta catctttgcc atcgactgcg attggtgtat
     1561 tggcacggtt acgcagtgca acgtgcaata cggcacggtt ttcagtgcgg ttgatttttt
     1621 tgccggagaa catcgcattt tttgctgatt ccaaaccaca ttcatttgcc agttggcgaa
     1681 gtaaggttaa ggttttttcg ttgatcgcat tttttgaaaa atcgactaat aattgatctt
     1741 caaaacggag ggaatatttg tcgaaacggt ttggatcttc ggcaaaaagt tgaggaatag
     1801 aaaggttgtc tgctttatgt tgctctaagg cattccaagc aaaagtttgc acagggttaa
     1861 ttttttgcat ctgagtttcc ttatactaaa ttaaaaaatc gattattcat ctgttctttg
     1921 agtcagttca tcaagacgtt tttctaattc ggttaatttt tcacgagtgc ggagtaacac
     1981 ttgagattga acatcaaatt cttcacgagt gacaacatca agacgggcta attgggcttg
     2041 aaggatttgc ttaaattttt catctagatc attaccgaca ttttttaagc tttgcggtaa
     2101 ggcgttatgg agttgttgag caatcgcttc taagttcttc ggcgtgagca tatttaaatt
     2161 ccttactata aatgagtatc ccaattttat tgaattttgg gtttaagaga aagcaaattc
     2221 tttgtaaaat atcacctttc gcaaaataca agcaaaaaag accgcttgta ttttttattt
     2281 gtggttcgta aacctcccac acaaaaaaac taaggacaca aaatgactca tcaaaaacca
     2341 aaagccgttg tgattttttc cggcggtcaa gactctacca cttgtttatt ccaagctatt
     2401 gctgaatttg gcaaagaaaa tgtggaagtc gttacctttc aatatgggca acgccattcg
     2461 attgaacttg aaaaagcacg ctggatttct aacgatttag gcgtcaaaca aacgctgatt
     2521 gatacttcgg tgattaaagc gattactacc aatgcgttaa tggataataa tgctgaaatt
     2581 caacaacaag gcagcacacc caataccttt gtggatgggc gtaatgcctt atttctgctt
     2641 tataccgcca tttatgccaa agggcagggc attcaaacta tttttaccgg cgtgtgtgag
     2701 accgatttta gtggttaccc tgattgccga gatgtatttg taaaatcaat gaatgtaacg
     2761 ctaaatttag cgatggacta taatttcaac attcgcacgc cattgatgta tttaactaaa
     2821 aaagaaactt gggcattagc agataagctg ggtgcttttg attatattcg agaccatacc
     2881 cacacctgtt atttaggcgt tgaaggtggt tgccacgact gcccgagttg cgtattgcga
     2941 gaaaaaggct tgaatgaata tttagcagaa agggaggtaa gcaatgttta aaattgctaa
     3001 agaatttagt tttgatatgg ctcatatgct agatggacac gatggcaaat gccaaaactt
     3061 acacggacac acctacaaat tgcaagttga ggtggcaggt gagctatttc aagagggagc
     3121 taaaagagga atggtaatgg actattcgga tctaaaagca gtggtaaaac aacatatttt
     3181 agagccgatg gatcacgctt ttatttacga cttacagagt gagcgtgaaa gccaagtagc
     3241 acaattatta attgatttaa actccaaggt ttatggtatc ccaactcgta ccacagccga
     3301 agaaatggcg aaatatatgt ttgaaaaatt agagaaagtg ggcttaccgg ttagcctaat
     3361 tcgcttgtgg gaaacgccta cttcttattg tgagtacagc aaataatggc ggagttaatt
     3421 tcaaaccctc gttttccgat tgttgagatc tttgaaagct tacaagggga aggctttaat
     3481 accggaatgc cggctatttt tgtacgtttt ggcaaatgca acctcacttg cccgtggtgc
     3541 gataccaatt acaatcaatt tgagcaatgg acgttaagcg atattcttgc caaagtaaga
     3601 agctattctg cgaaaaatgt gattattacc ggaggcgagc caacgattca gcctaattta
     3661 tcgttattat tagaacaatt taaaaaagag ggatattttt tagcgatcga aaccaacggc
     3721 ttaaaagagg ttccggcaca aattgattat attgcgacca gcccaaagcg aatgtaccaa
     3781 gaaaagtatc aacgccgttg cattgaattt gcgaatgaag tccgtatcgt cgttgatgga
     3841 gaagtacagg gtttctgtga gcaaatagaa agccaaatta aagctgagca ttactatctt
     3901 tcaccttgtg aggtagaggg aaaaatgaac ttgctggaaa ccatcaccca gattgggtta
     3961 ttaaatcagc gtccaaataa gcctaaatgg cagctaagta tccaaacgca taaaattgtg
     4021 gggattgaat aagtagaagt tagaagatga tttgtaaaag atcagacttg atctgacaat
     4081 tcactctaaa aagtgagagt ttcccgttta gaatatgagt gtccaaa
//
LOCUS       DANLZQ010000151         4045 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.152, whole genome shotgun sequence.
ACCESSION   DANLZQ010000151 DANLZQ010000000
VERSION     DANLZQ010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4045)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4045)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4045
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.152"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            48..1523
                     /gene="mepM"
                     /locus_tag="PXE50_002498"
     CDS             48..1523
                     /gene="mepM"
                     /locus_tag="PXE50_002498"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein DD-endopeptidase MepM"
                     /protein_id="HDL5623344.1"
                     /translation="MAVFLLAVFSLFVDIVLALKDQSSINNTSSQEDIIAIDKQEKYQ
                     SINTNLAENNTLHQEQHSSFINYVTDLLTQSALVIEHDDEIVDDQTATSYEDELVGQD
                     DEVEEGIETVENQVPGEKLPEEAEKALEDLLDVADQALRIQNQFSYTVARGDKLKDVL
                     EQSGLTASVAKNLIKQHSALAQLEPGQQFYWVLDNDGELEYMNWLVSEKEERVYERKE
                     NGKFSFQRFEKKGEWKLDVVRGTIQNSFAVSLKAVGLSDRQINQLAVGLQSQIATNKL
                     KKGDRFAILIKREYIDGKVTDLGNVEGIHVISSKKSYYAIQADNGRYYSRYGETLSGG
                     FARHPLLFAARVTSSFNPKRRHPITGRISPHKGVDYGVPIGTPIIAPSDGVVEHVAYQ
                     ARGAGRYIRIKHGHITTVYMHLSKTLVKPGQSVKKGERIALSGNTGGSTGPHLHYEFH
                     INGRPVNPITVKLPGSNSGMGNKERQAFLNKAKNVESRLKM"
     gene            1533..2216
                     /gene="dsbC"
                     /locus_tag="PXE50_002499"
     CDS             1533..2216
                     /gene="dsbC"
                     /locus_tag="PXE50_002499"
                     /EC_number="5.3.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional protein-disulfide
                     isomerase/oxidoreductase DsbC"
                     /protein_id="HDL5623345.1"
                     /translation="MKKNLITLGLMCLSTITFASDAKLKSQLEKIGATDVKISDSPLT
                     GFKMATSNEGVVYISQDGRYVIQGKVFELKNGKAIDITNQGLLAELNSYTNEMIVYPA
                     KNEKHVITVFMDITCHYCHLLHTKIKEYNDLGITIRYLAFPRGGMNTQTAKQMEAIWT
                     SADKVKALNDAEDGKLPTQIKTPDIVKKHYQLGIKFGVTGTPNMVTSEGELIGGYVEP
                     KELAKMLSE"
     gene            2301..4022
                     /gene="recJ"
                     /locus_tag="PXE50_002500"
     CDS             2301..4022
                     /gene="recJ"
                     /locus_tag="PXE50_002500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HDL5623346.1"
                     /translation="MEKIIKRRPLLTTEIVSTNPLLNRIYQSRGIKNTQELEHNLKNL
                     HRPQQLANIEQAVDLLLQAFREKSRIIIVGDFDADGATSTSLALIALRQLGFDKVDYL
                     IPDRFSQGYGLSVAVAEMVLAKGADLVLTVDNGISSTEGIALLKSHQIQVLVTDHHLP
                     PESLPNADALVNPNLAFCEFPSKSLAGVGVIFYVMMALRSRMREQHLFENKPEPNFAE
                     LLDLVALGTVADVVPLDQNNRILVHQGLQRIRSGHCRLGIKALAEVGKRDLSTLQAAD
                     LGFAIAPRLNAAGRLENMSLGVELLICENMELARRLALDLDSLNQTRKEFEQEMKAEA
                     LSICANLPSLAQSEQAHGIVLYQADWHQGVIGILASRIKDQFNRPVIAFAQESEESEY
                     LKGSARSINGVHMRDLLEHIDMRHPDLIEKFGGHAMAAGLTIHQSKLDLFKQIFDQSI
                     NAIIEPEQLQGIIYTDGELNALEFTLANAEMIRQGGPWGQHFPEPSFEGEFSILQQKL
                     LAGKHLKLMLQSEKGQLFDAIWFNVDVRAFPDLSIKKARLVYRLDINEFRGEKSLQLK
                     VEYLKYI"
BASE COUNT         1356 a          644 c          885 g         1160 t
ORIGIN      
        1 atgtaatttt agcgagagat cgtaagcgac ataaaaaaca ttttaagatt gcggttttct
       61 tattagcggt atttagtcta tttgttgata ttgttctcgc actaaaagat caatcctcaa
      121 tcaataatac atcttcacag gaagatatta ttgccattga taaacaggaa aaatatcaga
      181 gtatcaacac taatttggcg gaaaataata ctctccatca ggagcaacat tccagtttta
      241 ttaattatgt gactgattta ctgactcagt cggcattagt aatcgaacat gacgacgaaa
      301 ttgttgatga tcaaacagcg acttcttatg aagatgaatt agttgggcaa gacgatgaag
      361 tagaagaagg gattgaaacg gttgaaaatc aagttcctgg ggaaaaactc ccagaagaag
      421 ctgaaaaggc attagaagat ttacttgatg tggctgatca agcactacga attcaaaacc
      481 aattcagtta taccgtagct cgaggtgata aacttaaaga tgtattagag caatcaggct
      541 taactgcatc cgttgcgaaa aatttaatta agcaacattc ggcattagca caattagaac
      601 cgggtcaaca attttattgg gtattagata atgacggtga attagaatat atgaactggc
      661 tggtttccga aaaagaggaa cgggtttatg agcgaaaaga aaatggtaaa ttttcttttc
      721 aaagatttga gaaaaaaggg gaatggaagt tagatgttgt aagaggaact attcagaata
      781 gttttgcggt tagcttaaaa gccgttggct tatcagaccg ccaaattaac cagctagcgg
      841 ttggattgca gtcacaaatt gcgacgaata aattaaaaaa aggggatagg tttgcaattc
      901 tgattaagcg ggaatatatt gacggcaaag taacggattt aggaaatgtg gaaggaatcc
      961 atgtaattag cagtaaaaaa agttattatg ctattcaagc agataatgga cgctattata
     1021 gtcgatatgg tgaaacatta agtggaggat ttgctcgtca tccattatta tttgcagcaa
     1081 gagtaacttc ttctttcaac cccaaacgca gacaccctat tacagggaga attagtccgc
     1141 ataaaggggt tgactatggc gtgccaatag gtactccgat catcgcacca agtgatggtg
     1201 tcgtagagca tgtggcatat caagcccgtg gagcaggacg ttatattcgg ataaaacacg
     1261 gacatattac gactgtttat atgcacctca gcaaaacgtt ggtaaaacca gggcagagtg
     1321 ttaaaaaagg ggagcggata gcattatcgg gtaatacagg cggttcaacc gggcctcatt
     1381 tacactatga attccatatt aatggtcgac cggtcaaccc gattacggta aaattgcctg
     1441 gctcaaattc aggtatgggt aataaagaac gtcaagcatt cttaaataaa gcgaagaatg
     1501 tagaaagtag attaaaaatg taaggattct caatgaaaaa aaatctaatc actttaggat
     1561 taatgtgttt atcaaccatc acgtttgctt cagatgcaaa actaaaaagc cagcttgaaa
     1621 aaattggagc cacagatgtt aaaatttcag attctccatt aacaggcttt aaaatggcga
     1681 cttcaaatga aggtgttgta tatatcagcc aagacggtcg ttatgtaatt caaggtaaag
     1741 tatttgagct aaaaaatggt aaagcgattg atattactaa tcaaggattg ttggcagaat
     1801 tgaattcata cactaatgaa atgatcgtat atccagcgaa aaatgagaaa catgtgatta
     1861 cggtgtttat ggatattact tgccattatt gccatttact acatactaaa atcaaagaat
     1921 ataatgattt aggtattacc attcgctatt tggcattccc gcgtggtgga atgaataccc
     1981 aaacagcaaa acaaatggaa gctatttgga catcagcaga caaagtaaaa gcactgaatg
     2041 atgctgaaga tggtaaatta ccaacccaaa taaaaacgcc ggatattgtg aaaaaacatt
     2101 accaattagg gattaaattt ggtgtgacag gtaccccaaa tatggtaact tcagaaggtg
     2161 agttgattgg tggttatgta gagcctaaag aattagcgaa aatgttaagt gagtaattca
     2221 ttaacttgaa tacaagcggt ctttttttgt aaaatttttg caaaagaaga ccgcttgttg
     2281 tttcattaaa gaagagtatt gtggaaaaaa taattaaaag gcgcccatta ttaacaacgg
     2341 aaatagtctc tacaaacccg ttattaaatc gaatctatca aagtcgaggc ataaagaata
     2401 cgcaagaact agagcataat ttaaagaatt tgcatagacc acagcaactt gccaatattg
     2461 agcaagccgt tgacttgcta ttacaagcct ttcgtgaaaa aagccggatc attattgtgg
     2521 gtgattttga tgcagatggt gcaaccagta catcgcttgc ccttattgcg ttacgccaat
     2581 tgggtttcga taaggtagat tatttaattc cggatcgttt ttctcagggg tacggattga
     2641 gtgtagcggt tgctgaaatg gtattagcaa aaggggcgga tttagtctta acggtagata
     2701 atggaatttc ttcgactgaa ggcattgctc tgctaaaaag ccatcagatt caagttttgg
     2761 ttaccgatca tcatttaccg ccagagagcc tacccaatgc agatgcactg gtaaacccca
     2821 atttagcttt ttgtgaattt ccgtctaaat ctttagccgg ggtaggcgtg atcttctatg
     2881 taatgatggc attgcgttct cgtatgagag aacaacattt atttgaaaat aaaccagagc
     2941 caaattttgc tgaattactg gatttagtcg ctttaggcac agtggctgat gtagtgccgt
     3001 tagatcaaaa taatcggata ttggtgcatc aagggttaca gcgaatccgt tcagggcatt
     3061 gccgtttagg gataaaagct ttagcggagg tgggcaagcg agatctttct actttgcaag
     3121 cagcagattt gggttttgct atcgcaccac gtttgaatgc agctggtcgg ttagaaaata
     3181 tgtctttagg ggttgagtta ctaatttgtg aaaatatgga attagctcgc cggcttgcgc
     3241 ttgatcttga ttctcttaat caaacccgaa aagagtttga acaagaaatg aaagcagaag
     3301 cactgtcgat ttgtgcgaat ttgccaagtc ttgcgcagtc tgaacaggca cacggaatag
     3361 tgttatatca agcagattgg caccaaggtg taattgggat cttagcttct cgcattaaag
     3421 atcaatttaa ccgtcctgtc attgcttttg cacaagaaag tgaggaaagt gaatatctaa
     3481 aaggttctgc tcgctcgatc aacggagtac atatgcgaga tttactggaa catatcgata
     3541 tgcgacatcc agacttgatt gaaaaatttg gtggacacgc aatggcggct ggtttgacta
     3601 tccatcaatc aaaattagat ttatttaaac agatatttga ccaatctatt aatgcaatta
     3661 tcgagcctga gcaattacaa ggcatcattt ataccgatgg tgagttaaat gcactagagt
     3721 ttactttagc caatgccgag atgattaggc aaggtgggcc ttggggacaa cattttccag
     3781 aacctagttt tgaaggggag tttagcattc tccaacaaaa attactcgca ggtaaacatt
     3841 taaaattaat gttgcaatca gagaaagggc aactatttga tgcaatttgg tttaatgtgg
     3901 atgtaagggc gtttcctgac ttatcgatca aaaaggcaag attagtttat aggttggata
     3961 ttaatgaatt tcgaggagag aaatctttgc aattaaaagt ggagtatctt aaatatattt
     4021 gaaatgttat tttatgtaaa tttaa
//
LOCUS       DANLZQ010000152         4039 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.153, whole genome shotgun sequence.
ACCESSION   DANLZQ010000152 DANLZQ010000000
VERSION     DANLZQ010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4039)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4039)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4039
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.153"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(302..1396)
                     /locus_tag="PXE50_002501"
     CDS             complement(302..1396)
                     /locus_tag="PXE50_002501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HDL5623347.1"
                     /translation="MKKTTLAILASALIANSALAITIYDHKETGTQIEFIGSARIKWE
                     STSDKTSPVNGKATRNHVNHAVDNNGSRFGFRLTQQVGHGFYALGRVEWRMRGDSSSQ
                     HNFDHIYDHQLYAGIGHKQYGELTYGNMTNIADEVKQTDLPNTLSLSDGLLTGSSRRT
                     LQYVYKGIEGLKLGAFYGGNSQRGNNGLDLVNKRKDIWGAAAIYNYKIDDNQSLKLAT
                     GATRERSEQSIGNYERIALAFGTAYTYGKTTLGLDLERRETEDQNAIGHKRIEKEVRT
                     VLLHRLTDQWNAYTMYAYKENKLNAVGLANDSKVKRNQFMLGTEYYIVPKHLKGFVEW
                     QATRAKHYTNDVKTAKSRNYTTVVGLRAYW"
     gene            1530..2708
                     /gene="lpxB"
                     /locus_tag="PXE50_002502"
     CDS             1530..2708
                     /gene="lpxB"
                     /locus_tag="PXE50_002502"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HDL5623348.1"
                     /translation="MKQQFPVIGLVAGEVSGDILGAGLIKALKVHYPNARFIGVAGSR
                     MIEAGCQSLFDMEELSVMGLAEVVKHLPRLLKRRKQVIDEMLKLKPDVFIGIDAPDFN
                     LTVEEKLKASGIKTIHYVSPSVWAWRQKRVFKIARAANLVLAFLPFEKAFYDKFNVPC
                     RFIGHTMADAIPLEPNRTEACLALNIDESKRYMAILVGSRGSEIQFLAEPFLKAAQLL
                     KARFPDLQFLVPMVSQKRMEQFNAIKQQVAPELELNIIQGKARQAMIASECTLLASGT
                     AALEAMLCKSPMVVGYRMKPLTYWLAKKLVKTDYISLPNLLAQAPLVPELIQEACNPE
                     NLAQELSLFLADDEKNQQHKALLKQQFMQLHQSIQCNADEQAAQAVIDLLNGSTSGQI
                     "
     gene            2735..3787
                     /gene="sohB"
                     /locus_tag="PXE50_002503"
     CDS             2735..3787
                     /gene="sohB"
                     /locus_tag="PXE50_002503"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HDL5623349.1"
                     /translation="MWKEVLLNYGIFLLELLTVFGIIAVVVMLILESKKQNENGSISI
                     TNLSEKYKEQQKSLSGFFLSEEELKHQEKQEKKVAKEKAKAEKKRLKAGEECVESPSR
                     LFVLNFNGDMMAHEVNSLRREIDAVISLANPEKDEVLLKLESPGGVVHGYGLAASQLQ
                     RLRDRNIYLTAAVDKVAASGGYMMACVANKIVSAPFAVIGSVGVVAQVPNIHRLLKKH
                     DIDVDVMTAGEYKRTVTLVGENTEKGKQKFQQELEETHSLFKQFVARHRPQLDIEQVA
                     TGEHWFGQQAIELNLVDEIATSDDLLLNAIKEKEVIELKYKEKKKLAQKLGSQFEQSA
                     ENLLAKILHKSRSTLM"
BASE COUNT         1214 a          695 c          868 g         1262 t
ORIGIN      
        1 aataacccct catcactttt tgcagtttaa cctcttttgc aacagataat ttaaatttag
       61 gcgttttggc tgctcagtta ttgccattat gattatatta gttcacacta aaattttagt
      121 gttgtttctt aaagctgaag atgctaatag gtgagtaagc ggtttttacc actttgaaga
      181 taaatgcaat agcttcttgt ttgaaggatt agttgtattt aatcataaaa aatctgcacc
      241 ttaatcagtt ggttagccca acttttaggt gcagatcatt ctagtacgct tttcagtttt
      301 attaccaata tgctcgtaag cctacaacag tcgtataatt gcgagatttt gcggttttta
      361 catcattagt atagtgttta gcacgagttg cttgccattc aacaaagcct tttaagtgtt
      421 ttggaacaat gtaatattcc gttcccaaca taaattggtt tcttttaact ttgctatcat
      481 ttgccaagcc tacagcatta agtttgtttt ctttataagc atacattgtg taagcattcc
      541 attgatcggt taaacgatgg agtaacacag tgcgaacttc tttttcgata cgtttgtgac
      601 cgatagcatt ttgatcttcc gtttcacggc gttctaaatc taagccaagg gtagtttttc
      661 cgtaggtata agctgtaccg aaggcaagag caatgcgttc ataattgccg atagattgct
      721 cagaacgctc acgggttgca cctgttgcta attttaagct ttggttatca tcaattttat
      781 agttataaat tgctgctgca ccccaaatat ctttacgttt attgactaaa tctaagccat
      841 tgtttccacg ttggctattt ccgccataga atgctccgag ttttaatcct tcgatgcctt
      901 tgtaaacata ttgaagcgta cgtcgtgatg aaccggtaag taagccatca cttaagctga
      961 gtgtatttgg taagtcagtt tgttttactt catcggcaat attagtcata ttgccgtatg
     1021 ttaattcacc gtattgttta tgcccgattc ctgcatagag ttgatgatca taaatatgat
     1081 cgaagttatg ttgtgagctt gaatcgccac gcatacgcca ttccacacga cctaaagcat
     1141 agaatccgtg acccacttgc tgggttaaac ggaaaccaaa acgagagccg ttgttatcca
     1201 ctgcgtgatt aacgtggttg cgggtagctt taccatttac cggtgaggtt ttatctgagg
     1261 tgctttccca cttaatacga gcagaaccaa taaattcaat ttgtgtaccg gtttctttat
     1321 gatcgtaaat cgtaatagct agagctgagt ttgcgattaa ggctgatgct aaaatcgcta
     1381 atgttgtttt tttcataaaa atcactccat atgaatagat aaagggaggt agtgtatgtg
     1441 aatattcatt gctagacaat aatgttttgt tagtttatat gatgattggt tataatagag
     1501 tcacttacag atcttcaata atatttaata tgaaacaaca attccccgtt attggcttag
     1561 ttgctggtga ggtctctggc gatattcttg gtgccgggtt aattaaggcg ttaaaagtac
     1621 attacccgaa tgctcgattt atcggtgttg caggctctcg aatgattgag gctggctgcc
     1681 agtctttgtt tgatatggaa gagctttctg taatggggct agcagaggtg gttaaacatt
     1741 tacctcgttt acttaagcgt cgtaaacagg ttattgatga gatgcttaaa ttgaaaccag
     1801 atgtatttat cggtattgat gcaccggatt ttaatttaac cgttgaagaa aaactcaaag
     1861 cgagtgggat taaaacaatc cattatgtta gcccttcggt gtgggcttgg cgacaaaagc
     1921 gggtgtttaa aattgccaga gcagctaatt tagtgttggc atttctgcca tttgagaaag
     1981 cgttctatga taaattcaat gtgccttgtc gttttatcgg gcatacgatg gcagatgcga
     2041 tcccactcga accaaatcgt acagaggcat gtttagcgtt aaatattgat gaatccaagc
     2101 gatatatggc aattttggtg ggaagccgtg gcagtgaaat tcagtttttg gctgagcctt
     2161 ttttgaaggc tgctcagttg ttaaaagccc gttttccgga tttacagttt ttagtgccaa
     2221 tggtcagcca aaagcgaatg gagcaattta atgcaattaa acagcaagta gctcccgagt
     2281 tggaactgaa tattattcaa ggcaaggctc gtcaggctat gattgcgtca gaatgtactc
     2341 ttttggcatc gggaacagca gcactagagg caatgttgtg caaatctccg atggtagttg
     2401 gttatagaat gaaaccgctg acttattggt tagcaaaaaa attagtgaaa accgattata
     2461 tctccttacc gaatttattg gctcaagccc cattggtacc agaattgatc caagaagcat
     2521 gcaacccgga aaatttagct caagagttat ctctattttt agctgatgat gagaaaaacc
     2581 aacaacataa agcattgcta aaacagcagt ttatgcagct acatcaatca attcaatgta
     2641 atgctgatga gcaagctgcc caagcggtta tcgatctcct aaacggctcg acaagcggtc
     2701 aaatttagtt agttttttgt aaaaaggaaa atttatgtgg aaagaagtat tacttaatta
     2761 tggtattttt ttattagagt tattaactgt atttggcatt attgcagtgg tggtgatgct
     2821 gattttggaa tcgaaaaagc agaatgaaaa cggctcaatt tcaattacca atttatctga
     2881 gaaatataaa gagcagcaaa aatctctttc cggctttttt ctaagtgagg aagaattaaa
     2941 acatcaggaa aagcaggaga aaaaagtagc aaaagagaaa gctaaagcag aaaaaaaacg
     3001 cttaaaagca ggcgaagaat gtgtagaaag cccttcccgt ttatttgtat tgaattttaa
     3061 tggcgatatg atggctcacg aagtaaattc cctacgccgt gaaattgatg cggtaattag
     3121 cctcgcgaat ccggaaaaag atgaagtttt acttaaactt gaaagtccgg gcggagtggt
     3181 gcacggttat ggattggctg cttcgcagtt acaacgtttg cgtgatcgca atatttattt
     3241 aaccgcagcg gtagataaag tagctgccag cggtggttat atgatggcgt gtgtggcgaa
     3301 taaaattgtc tctgccccat ttgcggtgat tggctcagtg ggggtggtgg ctcaggtgcc
     3361 gaatatccac cgcttactga aaaaacacga tattgatgtg gatgtgatga ctgcaggtga
     3421 atataaacgc acggtgacgc tggtgggaga aaataccgaa aaagggaaac agaaattcca
     3481 gcaagaactg gaagaaacgc actctctgtt taagcaattt gtggctcgac accgcccaca
     3541 actggatatt gagcaggttg caacaggcga gcattggttt ggtcagcaag cgattgagct
     3601 aaatttggtt gatgagattg caaccagtga tgatctgctc ctcaatgcaa ttaaggaaaa
     3661 agaagtgatc gagctaaaat ataaagagaa gaaaaaactt gctcagaaat tgggttctca
     3721 attcgagcaa tcagcagaga acctgctcgc taagatttta cataaaagtc gttcaacgct
     3781 gatgtagcgt atatattatt aaagggctat cgtttatata gccccttatt ttatcagtta
     3841 gtaatagaat gaagtatttg ttcactattt aaatgacctg gaatactttt ctttaaattg
     3901 agtgaagaat ctaacaataa tgtagaagat cagacttgat ctgacaattc actctaaaaa
     3961 gtgagagttt cccgtttaga atatgagtgt caaaaatcaa tctaaacaaa aaggaaactc
     4021 tcatgtttta ttctaacaa
//
LOCUS       DANLZQ010000153         3932 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.154, whole genome shotgun sequence.
ACCESSION   DANLZQ010000153 DANLZQ010000000
VERSION     DANLZQ010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3932)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3932)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3932
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.154"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..>3932
                     /locus_tag="PXE50_002504"
     CDS             <1..>3932
                     /locus_tag="PXE50_002504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623350.1"
                     /translation="KRTYTGFWDGTFKVAWTNNPAWEIYDLAPILSKMLGVEISFDKW
                     ALYDVSRYCDQLVPDGMGGQEPRFTCNVWLTEVKTAYDLLNDFCSVFRAIPIWTGTEV
                     SVIIDRPRDPVWTYTNANVVSGFERSYSARKSRHNAVQVTYSDKTNGYESAIEYVSDD
                     EEIKKHGLNLSQVTAFGCTSRGQAYRTGKWILETEKREKETITFTVGREGLMHLPGDI
                     IRVADSHYAGTEIGGRVLAINGRKVTLDREISIDNASYFTYINGEATHSSIKIQSVNG
                     KEITLDSTPTGLETYGVWSLSTKQISSGLYRSISIVENADGTNTITALQHEPQKEAIV
                     DNSAHFVETARTLYKAPQINAVEVSTGYDGKLYITGDISSGDGKLTYDIKITKDGNLY
                     QYKKGLSDPNIELSDLPNGDYTVIIYGKNAKGQIVTEKTQTFTIDRPPAPTGVVVTGG
                     LGQITLEWDWVNEVTQTEIFAAETDNFALAKKIAKVTARTYAHTLKGNKVVRYYWLRH
                     TRGINVGPFYQQQGVRGQTAVDLDARLTELNTQLSRNIVNEVFDVAAPARGLELVKTV
                     ANLTDKGTKLASSQVYNQADGKLYTWNGTAYSATVAAEDVTGKLSKSKIDTSLISQLT
                     GADNTANLARRLAETAQSNINQEITNRQDAVTAEANNRTKAIQAESANLTKKIQAEAT
                     ARGAAVTQLQNVDAQQAQLISAVTAKADNALSGLEEEKTARANADKAESQAREALTAR
                     MGAAESNIVTIQRTVANNAQSISEVSQNLNAKIDNINIGGRNLLRDSEFNAYNKWGSP
                     QIEFAENANRRTIKVTSTGTNGPVGIVSSNRHSTSYFQQGETYTLSLFARGSKALDYL
                     YLMRQDGNNVRLPVINVASETEFNHYKLTFKAPFTTQQGYVLIGFRQTSTEQFVEFHS
                     VKLEKGNVATDWTPAPEDVESAVSAVSADLTSYKQTQAATDSAQAQQLNQLSVNLTKA
                     ETNFNAKITEEKKARVDADKVNADKLTDITSRVANAESTITNFQSTKANKSEVASIAQ
                     QNLQSIWRTDAQSAVDALKIGGANLLVDSEYLTTARWGGSSRVASSQYGDRRLTQVFV
                     TQAGTGHFGVTQGTQKATTRIRQGETYTLSLNAQGTAGFTRTGLNYVYLIREDGGNFR
                     LPTLPLTASLSQRPKVTFTAPWTSNQVRLLIGANGIFEATDWFAFHSVKLEMGNVATG
                     WTPTAKDIDDKVSAVQSNLTAYQAAQAKADQAKATQISGLTTRMGAAESNLTRTERAV
                     TELNQTTVTTLRDLTARTKTTEGSLSRLETAKASKTEVASIAQSSLQS"
BASE COUNT         1235 a          863 c          894 g          940 t
ORIGIN      
        1 ttaaacgcac ttacaccggc ttttgggacg gcacatttaa agttgcgtgg acgaacaacc
       61 ctgcttggga aatttacgat ttagctccga ttttaagcaa aatgcttggg gttgaaatca
      121 gttttgacaa atgggcgttg tatgatgttt cccgctattg cgatcaactt gtgccagatg
      181 gtatgggcgg acaagagcct cgttttacct gtaacgtatg gctcacggaa gttaaaactg
      241 cctatgactt gttgaatgat ttctgctcgg tattccgtgc gattccgatt tggaccggca
      301 cggaagtctc cgtgattatc gaccgtcctc gtgatccggt ttggacttat accaacgcta
      361 atgtagtcag cggttttgaa cgctcatatt ctgcccgcaa atctcgccat aatgcggtac
      421 aagtgaccta ttcggataaa acgaatggct atgaaagtgc gattgagtac gtttcagacg
      481 atgaagaaat caaaaaacac ggcttaaatt taagccaagt aactgccttt ggctgtacat
      541 ctcgtgggca agcataccgt accggtaaat ggattttaga aaccgaaaaa cgagaaaagg
      601 aaaccattac ctttaccgtt ggacgtgaag gcttaatgca cttgccgggc gatattatcc
      661 gtgttgccga cagccattat gccggtacgg aaattggcgg acgtgtactg gcgattaatg
      721 ggcgaaaagt tacccttgac cgtgaaatta gcattgataa cgccagttat tttacctata
      781 tcaacggtga ggcaacgcac tctagcatta aaatccaatc ggtaaacggt aaagaaatta
      841 cgctggatag tacaccaacc ggcttagaaa cctacggtgt ttggtcgtta tcgactaaac
      901 aaatcagctc tggattatat cgctcaatct cgattgtcga aaatgcggac ggcacaaaca
      961 ctatcacagc gttacaacac gaaccgcaga aagaggcaat tgttgataac tccgctcact
     1021 ttgtggaaac ggctagaaca ctctacaaag ctccacaaat taacgcagtg gaagtctcga
     1081 ccggttatga cggtaagctc tacattaccg gtgatattag ctccggtgat ggcaagctaa
     1141 cctatgatat taaaattacc aaagatggca atttatatca atacaaaaaa ggcttaagcg
     1201 atccgaacat tgaactaagt gatttaccta acggcgatta taccgtcatt atttacggca
     1261 aaaacgccaa agggcaaatc gtcaccgaaa aaacacaaac ctttactatt gatcgacctc
     1321 cagctccgac cggtgtagta gtaacaggtg gattagggca aattaccctc gaatgggatt
     1381 gggtaaatga ggttacgcaa accgagattt tcgcggccga aaccgataat ttcgcccttg
     1441 caaaaaaaat cgcaaaagtg accgctagaa cctacgctca cacactaaaa ggtaacaagg
     1501 ttgtacgcta ttattggcta cgtcatacca gaggcattaa tgtcggaccg ttttatcaac
     1561 aacagggggt aagaggacaa acagcggttg atttggatgc tcgattaacc gaattaaaca
     1621 ctcagttatc acgcaatatt gttaatgagg tttttgatgt tgctgcaccg gcaagaggtt
     1681 tagaattagt gaaaacagtc gctaatttga ccgacaaagg tactaaactg gcgtcatctc
     1741 aagtttacaa tcaggctgac ggcaagctct atacttggaa cggtacagca tactcagcta
     1801 cagtggctgc ggaagatgtt accggcaaat tatcaaaatc taaaattgat acgtccctta
     1861 tttcgcaatt aacaggtgca gataacaccg caaatttggc aagaagatta gcggaaacag
     1921 ctcaaagcaa cattaaccaa gagattacta accgacaaga tgccgttact gccgaagcaa
     1981 ataaccgtac taaagccatt caagccgaaa gtgcgaattt aacgaaaaaa attcaagctg
     2041 aagcaaccgc tcgtggggct gctgttacac agttacaaaa tgttgatgct caacaagcac
     2101 agttgatttc tgctgtcaca gcaaaagctg ataatgctct ttcaggcttg gaagaagaaa
     2161 aaacagcacg agcaaacgcc gataaagcgg agtctcaagc acgtgaagca ttaacagcaa
     2221 gaatgggagc agctgaaagc aatatcgtaa ctattcaacg tacggtagca aataatgccc
     2281 aaagcattag tgaagtcagt cagaatttaa atgctaagat tgataatatt aatatcggcg
     2341 gtcggaattt attaagagac agcgagttca atgcgtacaa taaatggggt agcccacaaa
     2401 ttgaatttgc tgaaaatgca aatcgccgaa ctatcaaagt aacctcaaca ggtactaacg
     2461 gtcctgttgg tattgtttca tctaatcgcc attccacatc ttatttccaa caaggagaaa
     2521 cttatacact ctcattattt gctcgaggaa gtaaggcact agactatctc tatctaatgc
     2581 gtcaagatgg gaataacgtt agattaccag tgattaacgt tgcctctgaa actgagttta
     2641 atcattacaa actcacgttc aaggctcctt ttaccacgca acaaggttat gtcttaatcg
     2701 gttttcggca aaccagcaca gagcagtttg ttgagtttca cagcgtcaaa cttgaaaaag
     2761 gcaacgtagc cacagactgg acaccagcac cggaggatgt ggagagtgcg gttagtgctg
     2821 tttcggctga tttaacgagt tataaacaaa ctcaagcggc taccgattca gcacaagcac
     2881 agcaacttaa tcagttatct gtgaacttga ccaaagcaga gactaatttc aacgccaaaa
     2941 tcacggaaga aaaaaaagct cgtgttgatg cagataaagt gaatgcagat aaactcacag
     3001 acataacaag ccgtgttgca aatgcggaat caactattac caatttccaa tcaaccaaag
     3061 cgaataaaag tgaggtggca agtattgccc agcagaactt acagagcatt tggcgcaccg
     3121 atgcgcaaag tgcggtggat gccttgaaaa tcggtggtgc aaatctactg gttgatagtg
     3181 agtatttgac gacagcccgt tggggcggta gctcacgagt ggcaagctcg caatatggtg
     3241 atcgtcgctt gactcaagtg tttgtgaccc aagcaggcac agggcatttt ggtgtgactc
     3301 aaggcacaca aaaagccact acgcgtattc gtcagggtga aacctatacc ttgtcactaa
     3361 atgcgcaggg gacggcaggt tttacccgca cagggttaaa ctatgtgtac cttatccgcg
     3421 aagatggtgg caattttaga ttgccaactt tgccgcttac tgcatcattg tcccaacgcc
     3481 ctaaagtgac atttactgcg ccgtggacga gcaatcaagt tcggttactg attggcgcaa
     3541 atggcatatt tgaggcgaca gactggttcg catttcacag cgttaagctc gaaatgggta
     3601 atgttgccac aggctggaca ccaaccgcca aggatattga cgacaaagta tcagcggttc
     3661 agtccaacct caccgcttat caggcggcac aagctaaagc agatcaagcc aaagctacgc
     3721 agatttcggg gctcacaacc cgaatggggg cagcggaaag taacctcact cgcaccgaac
     3781 gggcagtgac ggaacttaat cagacaacgg tgacgacact gcgtgatcta accgcgcgca
     3841 ccaaaacaac ggaaggttcg ctctctcgtt tggaaaccgc caaagcaagt aaaactgagg
     3901 tggcaagtat tgctcaaagc tccttacagt ca
//
LOCUS       DANLZQ010000154         3822 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.155, whole genome shotgun sequence.
ACCESSION   DANLZQ010000154 DANLZQ010000000
VERSION     DANLZQ010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3822)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3822)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3822
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.155"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            27..488
                     /gene="argR"
                     /locus_tag="PXE50_002505"
     CDS             27..488
                     /gene="argR"
                     /locus_tag="PXE50_002505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ArgR"
                     /protein_id="HDL5623351.1"
                     /translation="MDKIDSLSEAFKSLLKEEKFGSQSEIVAALQEMGFDNINQSKVS
                     RMLSKFGAVRTRNPKMEMVYQLPVELSVPTTSSPLKNLVVDIDHNDALIVVKTSPGAA
                     QLIARLLDSMGKAEGILGTIAGDDTIFITPVRNVQIEKLVKNVTQLFETSL"
     gene            538..1434
                     /locus_tag="PXE50_002506"
     CDS             538..1434
                     /locus_tag="PXE50_002506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HDL5623352.1"
                     /translation="MHIFITGGTGFIGRELIQQLKSENHHFTLLTRDTEAKSDDLQIN
                     YCYSLDELVDLNDFDAVINLAGEPIFDKRWTDEQKQKLIESRVNLTNKLSQLMNASSN
                     PPHTFLSGSAIGIYGDLPPSANFYTESTACYQDCFTNRLCQQWEAAALKAASDKTRVC
                     LIRTGTVFSPEGGALKKILPLYRCGLGGKLGSGKQYWAWISRRDHVQAVIFLLKNANC
                     SGAYNFVAPNPVRNEEFNRILANAVNRPAFFTVPEFALKLGLGERACLVLDNQQLIPE
                     KLLAASFVFQDPILTENVFLNP"
     gene            1479..3677
                     /gene="uvrD"
                     /locus_tag="PXE50_002507"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
     CDS             1479..3677
                     /gene="uvrD"
                     /locus_tag="PXE50_002507"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HDL5623353.1"
                     /translation="MDFSLLLDGLNDKQREAVAAPIGNYLVLAGAGSGKTRVLTHRIA
                     WLIGVENVPESNILAVTFTNKAAAEMRHRIEYTLSQSGDNRLFGMWVGTFHSIANRLL
                     RSHYLDADLPQDFQIMDTEDQQRLLKRLLKLHNIDEKHFPPKHVAWYINAQKDKGKRA
                     KDIDHYNDPNEKKLVEIYQIYQDACDRAGLLDFAELLIRAYELFKTKSTILQRYQQRF
                     QQILIDEFQDTNNIQYDLIRLLAGDVGKVMIVGDDDQSIYGWRGAQVENIQRFLNDYD
                     NAQTIRLEQNYRSTGNILSCANELIANNDNRLGKNLWTDSGDGEPVDIYCAFNELDEA
                     RFVASQIKQWKEDEGDLAECAVLYRSNSQSRVIEEALIQANIPYRIYGGMRFFERQEI
                     KDALAYLRLIANRQDDAAFERVINTPTRGIGDRTLDTLRQITRGRQITLWQAIQVAVQ
                     EEQLSGRATSSLLRFVELINALDQETEQMSLAEQTDFVIKKSGLYEMYKQEKGEKGEV
                     RIENLEELVTATKQFVKPDEAEELTDLTAFLTHASLEAGEAQASQHEDYVELMTLHSA
                     KGLEFPRVFIVGVEEGIFPSGMSFDEGRLQEERRLAYVGITRAKKKLTISYAESRRLY
                     GKEERHVPSRFIAELPEEHIREVRLRGSINRAASFNQANSFAKNPTKTTASFLNDDTW
                     KMGQKVNHAKFGQGTIINVEGSGEATRLQVAFVGNGIKWLIAKMANLERI"
BASE COUNT         1173 a          724 c          866 g         1059 t
ORIGIN      
        1 aagtttttgt gaataagagt gtgaaagtgg acaagataga tagtttatca gaagcgttta
       61 aatcgctgtt aaaggaagaa aaattcggct cgcaaagtga aattgttgcc gcactacaag
      121 agatgggctt tgataatatc aaccaatcca aagtttctcg aatgttatca aaatttggtg
      181 cagtcagaac ccgtaatcct aaaatggaaa tggtgtatca gctaccagtc gaattaagtg
      241 taccgactac ctccagccca cttaaaaatt tggtggtaga tattgatcat aatgatgcgt
      301 taattgtagt caaaaccagc cccggtgcgg ctcaactgat tgcacgtttg ctcgattcaa
      361 tgggtaaagc cgaaggtatt ttaggcacta ttgctggcga tgatacgatt tttataacgc
      421 cggtacgcaa tgtgcaaatt gaaaaattgg tgaagaatgt gacacagtta tttgaaacat
      481 cattatagaa taagtaaagg aggacttaat gttctcctta ttttttagga gattattatg
      541 cacattttta taacaggtgg tacgggtttt attgggcgtg aattaatcca gcaattaaaa
      601 tctgaaaatc accactttac acttcttact agagatacag aagcgaaaag tgatgattta
      661 cagattaatt attgctattc acttgatgaa cttgttgatt taaatgattt tgatgcagta
      721 attaaccttg ccggtgagcc gatttttgat aaacgttgga cagacgaaca aaaacagaaa
      781 ttgattgaaa gccgggttaa cctaacgaat aagctcagtc aattaatgaa tgcaagctct
      841 aaccctccgc atacttttct ctccggttcg gcaatcggga tttatggcga tttgcctcct
      901 tctgcaaatt tttatacaga atcgaccgct tgttatcaag attgctttac caaccggctt
      961 tgccaacagt gggaagccgc tgcactaaaa gccgcaagtg ataaaacccg agtgtgttta
     1021 attcgtaccg gcacggtatt ttcgcccgaa ggcggagcat taaagaaaat tttaccgctt
     1081 tatcgatgcg gattaggcgg aaaacttggt tcaggcaaac aatattgggc gtggatcagc
     1141 cgccgggatc acgtacaagc ggtcattttt ctgctcaaaa atgcaaattg ttcgggtgct
     1201 tataattttg ttgcaccaaa tccggtgaga aatgaagaat ttaatcgtat tttagcgaat
     1261 gctgttaatc gcccggcatt ctttactgtg cctgaatttg ccttgaaatt aggcttaggc
     1321 gaacgagctt gtttagtctt agataatcaa cagctcattc cggaaaaact actcgcagcc
     1381 agttttgtat tccaagatcc gattttaacc gagaacgttt tcttaaaccc ataatttagg
     1441 ctataatgct gtataaaagc acagattaaa aggtgattat ggatttctca ttattattag
     1501 acggtttaaa tgacaagcag agggaggcgg ttgctgcccc gattggtaat tatttagtgt
     1561 tagccggggc gggttcgggc aaaactcggg ttttaaccca tcgcattgcg tggctgattg
     1621 gggtggaaaa tgtgccggaa tccaatattc tggctgttac ctttaccaat aaagcggcgg
     1681 cggaaatgcg acatcggatt gagtacactc tttcccaatc gggcgataat cgattgttcg
     1741 gaatgtgggt tggtactttc cacagcattg ccaaccgctt acttcgttcc cactatttag
     1801 atgcggattt accgcaagat ttccaaatta tggataccga agatcagcaa cgtttactca
     1861 aacgtttact gaaactgcat aatattgatg agaaacattt tccgccaaaa cacgttgcgt
     1921 ggtatatcaa cgcccaaaaa gataaaggca aacgggcaaa agatattgat cactataacg
     1981 atccgaatga aaaaaaattg gtggagattt accaaatcta tcaagatgcc tgcgaccgag
     2041 ccggtttgtt agattttgcc gagctgttga ttcgggctta tgaactattc aaaaccaaat
     2101 caaccatttt gcaacgttat caacaacgtt ttcagcaaat tttgattgat gagtttcaag
     2161 acaccaacaa tattcagtac gacttaattc gtttgcttgc cggcgatgtc ggcaaagtga
     2221 tgattgtcgg cgatgatgat cagtctattt atggttggcg tggggcacag gttgagaata
     2281 tccaacgttt cttaaatgat tatgacaacg ctcaaaccat tcgcttagag caaaattacc
     2341 gctctaccgg caacatttta agctgtgcca atgaattaat tgccaataac gataaccgct
     2401 taggcaaaaa tttatggaca gatagcggtg atggcgagcc tgtggatatt tactgtgcct
     2461 tcaacgaact tgatgaagct cgctttgttg cctcgcaaat caagcaatgg aaagaagacg
     2521 agggtgattt ggcggaatgt gcggtgttgt atcgcagcaa cagccaatct cgtgtgattg
     2581 aggaagcttt aattcaagcg aatattcctt atcgcattta cggtggaatg cgattctttg
     2641 aacgccaaga aattaaagat gctctggctt atttacgctt aatcgccaat cgtcaagacg
     2701 atgcggcgtt tgaacgggtg atcaacacgc caaccagagg cattggcgat cgtaccttag
     2761 acacactccg tcaaattacc cgtggtcgcc aaattacgct gtggcaagca attcaagtgg
     2821 cggtgcaaga agaacaactt tcagggcgtg ccacttcttc cttattgcgt tttgtagagc
     2881 tgattaatgc tcttgatcaa gaaaccgagc agatgtcgct tgccgaacaa accgattttg
     2941 tgattaaaaa atcgggttta tatgaaatgt ataagcaaga aaaaggcgaa aagggcgaag
     3001 ttcggattga aaacttagaa gagttagtta ccgcaactaa gcagtttgtg aaacctgacg
     3061 aagcggaaga gctgaccgat cttaccgcat ttttaaccca cgcctcactt gaggctggag
     3121 aagcccaagc ctcgcaacac gaagattatg tcgaactgat gacgctacat tccgccaaag
     3181 gattggagtt tccccgtgtg tttattgtgg gcgtggaaga agggattttc ccaagcggaa
     3241 tgagctttga tgaaggcagg ttgcaagaag aacgccgttt ggcttatgtc ggcataaccc
     3301 gagctaagaa aaaactgacg attagctatg ccgaatcaag acggctttat ggtaaagaag
     3361 aacgccacgt tccgtctcgc tttattgctg aattacctga agagcatatt cgagaagtga
     3421 gattgagagg ctcaattaac cgagcggcaa gttttaacca agctaattca tttgcaaaaa
     3481 atccgacaaa aacgaccgct tcctttttaa acgatgatac ttggaaaatg gggcagaaag
     3541 tgaaccacgc taaatttgga caaggcacga ttattaatgt ggagggctca ggtgaagcca
     3601 cccgtttgca agttgccttt gtcggcaacg gcattaaatg gctgattgcc aaaatggcaa
     3661 atttagagag gatttaggcg aataaaaagt tttttgcagg aatatagatg gcgagatata
     3721 ttgcccctta accttaaact aagggtaaat aaaattaaat aatgcaagct agatataatg
     3781 taaagtatca gaaataagat attaatttaa gataaagaat ag
//
LOCUS       DANLZQ010000155         3699 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.156, whole genome shotgun sequence.
ACCESSION   DANLZQ010000155 DANLZQ010000000
VERSION     DANLZQ010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3699)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3699)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3699
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.156"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            110..442
                     /locus_tag="PXE50_002508"
     CDS             110..442
                     /locus_tag="PXE50_002508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF413 domain-containing protein"
                     /protein_id="HDL5623354.1"
                     /translation="MADSFSVTRRFFDDKNYPRGFSRHGDYTIRESQTLEQFGQACLA
                     LESGERKPATQEEKRFVAVMKGEEVAETDIEKAWLKYRTLTSKTKRIYTLSGNAGSDA
                     GDDFSAAE"
     gene            507..1598
                     /gene="trmA"
                     /locus_tag="PXE50_002509"
     CDS             507..1598
                     /gene="trmA"
                     /locus_tag="PXE50_002509"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HDL5623355.1"
                     /translation="MTLPIEQYSDLLAKKTENLTALLKPFNPPAIEVFASKPSHFRMR
                     AEFRVWHEEGELYHIMFNPETKARYRVDSFPIASELINHMMTALLAEIKGNELLTRKL
                     FQIDYLSTLSGEIAVSMLYHKSLNEEWVEQANALKSRLEQQGFKVQIIGRANKQKIAL
                     DCDYVEEILPVHGKNYVYRQVENSFTQPNAEMNIKMLEWARNCTKNSEGDLLELYCGN
                     GNFSIALAENFRKVLATEISKSSVQSAQYNIEKNGIVNLQIIRMSAEEFTQAMNGVRA
                     FYRLKGIDLNAYECNTIFVDPPRAGLDQATLNMVQAYERILYISCNPETLAENLQQLS
                     QTHRIEKAALFDQFPYTHHIESGVWLIRK"
     gene            1690..1779
                     /locus_tag="PXE50_002510"
     tRNA            1690..1779
                     /locus_tag="PXE50_002510"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1724..1726,aa:Ser,seq:tga)
     gene            1935..2306
                     /locus_tag="PXE50_002511"
     CDS             1935..2306
                     /locus_tag="PXE50_002511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HDL5623356.1"
                     /translation="MKYLYIICGFICIGLGIIGAVLPGLPTTPFLLLALFCFTKGSER
                     IRQWFIQTKLYKKYLQEYDEKRAMTMKQKITILAISFPFTLFAFFALPHIGGKIALVV
                     LVIIQYWYFFCKMKTLEPENA"
     gene            complement(2303..3214)
                     /gene="xerC"
                     /locus_tag="PXE50_002512"
     CDS             complement(2303..3214)
                     /gene="xerC"
                     /locus_tag="PXE50_002512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HDL5623357.1"
                     /translation="MTTSNPLFQQTRPYWDFLRIEKQVSPHTLSNYQRQLMAVSELFS
                     QAGIENWEEVESSSVRWMLSQSHKQGLSAKSIGLRLVALRQWFVYLIKIGRMSANPTL
                     GVKSPKVGKHLPKNIDAEQVGQLLAIESDEPSDIRDIAMMELMYSSGLRLSELQGLDL
                     GDMDLSAREVRVQGKGSKERIVPIGSQALKALNRWLEMRLQFKPQDNAVFLNKRGGRL
                     SHRSIQLAMKKWGERQGLESHLHPHKLRHSFATHMLEASGDLRAVQELLGHSSLSTTQ
                     IYTHLDFQHLAKIYDSAHPRARRKQED"
     gene            complement(3281..3571)
                     /locus_tag="PXE50_002513"
     CDS             complement(3281..3571)
                     /locus_tag="PXE50_002513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5377 domain-containing protein"
                     /protein_id="HDL5623358.1"
                     /translation="MSVKTEVLFSNHWNVRVSDPGFEGSPSHYFETVYLTLEAFINGE
                     NVHYEFTRKVEQEVKTHRSFTDVNELFEFLGEYLSPVALGNVGVRIGQLGLA"
BASE COUNT         1088 a          818 c          724 g         1069 t
ORIGIN      
        1 atttgccaaa tttgaccgct tttttacatt aaggcattga tttattcgct gtttttgttt
       61 aatgtatgcc gattttattt tccctaattt caaacaacga ggcattatta tggcagacag
      121 tttcagcgtt acgcgccgct tttttgacga taaaaattat ccacgtggtt tctctcgcca
      181 cggcgattac accattcgtg aatcacaaac tttagaacaa ttcggtcaag cttgcttggc
      241 tttagaaagt ggtgaacgta agccggcaac tcaagaagaa aaacgtttcg ttgcggtaat
      301 gaaaggcgaa gaggtagcag aaactgacat tgaaaaagcg tggttaaaat accgcacatt
      361 aactagtaaa acaaaacgca tctacaccct ttcaggcaat gcaggtagcg atgccggcga
      421 tgacttcagt gctgctgaat aatttctaat ttaaaaccac gaagtaattc gtggtttgtt
      481 ttttcatttg ctatttgtgg taaaaaatga ctcttcctat cgaacaatat tccgatcttc
      541 ttgcaaaaaa aaccgaaaat ttgaccgctt tactcaagcc gtttaacccg cctgcgattg
      601 aggtatttgc ctcaaagcca agccatttcc gtatgcgggc agaatttcga gtgtggcacg
      661 aggaaggcga gctgtaccac attatgttca accctgaaac caaagctcgt tatcgtgtgg
      721 atagcttccc tattgccagt gagctgatta accatatgat gaccgcatta ttggcggaaa
      781 ttaaaggcaa tgaactactg actcgcaagc tgttccagat cgattattta agcaccttaa
      841 gcggtgaaat tgcagtctca atgctttacc acaaaagcct gaatgaagaa tgggttgaac
      901 aggcaaacgc cttaaaaagc cgtttagagc aacaaggttt caaagtgcaa attatcgggc
      961 gtgccaataa acaaaaaatc gcactggatt gcgattatgt ggaagaaatt ctaccggtac
     1021 acggcaaaaa ttatgtgtat cgccaagtgg aaaacagctt tacccagccg aatgcggaaa
     1081 tgaatattaa aatgctggaa tgggcgagaa attgcacaaa aaatagtgaa ggcgatttgc
     1141 ttgagcttta ctgcggcaac ggcaattttt cgattgcctt ggcggaaaac ttccgcaaag
     1201 tgctggcaac cgagatctca aaatcttcag tgcaatcggc tcaatacaat attgaaaaaa
     1261 atggcattgt taacctacaa attatccgaa tgtcggcaga agaatttacc caagcgatga
     1321 acggtgtgcg agccttttat cgcttaaaag ggattgattt aaacgcctac gaatgcaata
     1381 ccatttttgt tgatccacct cgtgcagggt tagatcaagc tacattaaat atggtgcaag
     1441 cgtatgagcg gattctctat atctcttgca atccggaaac ccttgccgag aatttacaac
     1501 aattaagcca aacccatcgg attgaaaaag ccgctctttt tgaccaattc ccttacaccc
     1561 accatattga aagtggcgtt tggttaatta gaaaataaat tgtgctgaaa aaaagaacga
     1621 ataagcagct tttaagattt attacttgac gatgttcgca ataatctcta ttattgcaac
     1681 gttttcaacg gaggaatggc agagcggttg aatgcaccgg tcttgaaaac cggcgagggt
     1741 taacgccctc cgtgagttcg aatctcactt cctccgccag tctttaaacc tgttgagcaa
     1801 tcagcaggtt tttttatttc atttgcaaga aaatcagata aaaccaccgc ttgaatccat
     1861 cgctataaac tggttgaaat cagcctaaag ttgctttagg ataattgcga ttcattatca
     1921 ataacttaat tattatgaaa tacctttata ttatctgtgg ttttatttgt attggtttag
     1981 gcatcatcgg ggcagtatta ccgggcttgc cgaccacacc gttcttactt ttggctctgt
     2041 tctgctttac taaaggctcg gagagaatcc gccagtggtt tattcaaacc aaattataca
     2101 aaaaatatct gcaagaatat gatgagaaac gggcaatgac gatgaagcaa aaaatcacga
     2161 ttttagcgat ttcgtttccg tttacactat ttgctttctt tgcactgccc catatcggtg
     2221 ggaaaattgc gttagtagtg ttagtgataa ttcaatattg gtatttcttc tgcaaaatga
     2281 aaacccttga accggagaat gcctaatctt cctgcttccg ccttgctctt gggtgggcag
     2341 agtcataaat tttagctaag tgttggaaat ccagatgcgt ataaatttga gtggtggaca
     2401 ggctactatg acccaataat tcctgaaccg ctcgcaaatc accgcttgcc tctaacatat
     2461 gagtcgcaaa agagtgacgt aatttatgtg gatgcagatg gctttccagc ccttgtcgct
     2521 caccccattt cttcattgcc aactgaatgg aacgatgaga taaccgccca cctcgcttat
     2581 tcagaaacac cgcattatct tgcggcttaa attgcaaacg catttctaac cagcgattta
     2641 acgcttttaa cgcttgcgag ccaatcggca caattcgctc tttgctaccc ttaccttgca
     2701 cccgtacttc tcgtgccgat aaatccatat cgcctaaatc cagcccttgt aattccgata
     2761 aacgcaagcc ggaactatac atcagctcca tcatcgcaat atctcgaata tcgctcggct
     2821 catcactctc aatcgccagc aactgcccga cctgctccgc atcaatattt ttcggcaaat
     2881 gcttacctac tttcggcgat ttcaccccta aagtcgggtt tgccgacatt cgcccgattt
     2941 taatcaaata gacaaaccat tgccgtaacg ccaccaagcg taagccgata cttttcgcac
     3001 tcaacccttg cttatggctt tggcttaaca tccaacgcac cgagctactt tcgacctctt
     3061 cccaattttc aatgcctgct tgcgaaaaaa gctcgctcac cgccattaat tggcgttgat
     3121 aattgcttaa ggtatgcggg ctaacttgct tttcaatgcg taagaaatcc caataggggc
     3181 gggtttgttg gaaaagaggg ttggaagtgg tcataaacgt aataacaagc ggttaatttt
     3241 taggaaaatg ttgcaagggc aaaagatttg ccctttgaga ttaggctagc cccaactgac
     3301 cgatacgcac gccaacatta ccaagtgcaa cagggcttaa atattcgccg agaaattcaa
     3361 acaattcatt cacatcagta aaactgcgat gagttttcac ttcttgctcc actttacgag
     3421 taaattcata atgtacattt tcgccgttaa taaaggcttc cagcgttaaa tatacggttt
     3481 caaaatagtg gcttggcgag ccttcaaagc ccggatcact cactcgaaca ttccaatgat
     3541 tactaaataa aacttcggtt tttactgaca ttgtgttttc cttcttccta taagtacgta
     3601 cattatttta atcaagatag attgaatttg ccacttttcc tagtcagaat cgaggcaaat
     3661 cttatttggt ttgtcctctt atatctttcc ctcaaaata
//
LOCUS       DANLZQ010000156         3532 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.157, whole genome shotgun sequence.
ACCESSION   DANLZQ010000156 DANLZQ010000000
VERSION     DANLZQ010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3532)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3532)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3532
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.157"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            30..1964
                     /gene="cpdB"
                     /locus_tag="PXE50_002514"
     CDS             30..1964
                     /gene="cpdB"
                     /locus_tag="PXE50_002514"
                     /EC_number="3.1.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2',3'-cyclic-nucleotide 2'-phosphodiesterase"
                     /protein_id="HDL5623359.1"
                     /translation="MLVLGTQPSAFAQTAKNKAGLRVIATTDIHGFLTDFDYYKDAPT
                     EKFGFTRTASLIKQARAEVKNSVLVDNGDLIQGNPISDYQSTKGAKEGKPEPSIMALN
                     AMQYEVGTLGNHEFNYGLSYLDNAIKQAKFPIVNANIVKPGTDEPFFTPYVIQQKEIV
                     DEKGNKHTIKIGYIGFVPPQVMIWDKANLEGKVEARDIVKTAQKYVPIVKKEGADIVV
                     ALAHTGPSDEPYKEGAENCAFYLADVKGIDAVIFGHSHRLFPNKEFANSPNADIAKGT
                     MKGVPESMAGYWGNNISVIDLSLAENDGKWGVVDGRAELRPIYNTEEKKATVENHPEI
                     VALLKETHEATRQFVSQPIGKATDNMYSYLALVQDDPTIQIVNQAQKAYVENVVKGLP
                     ELAGLPILSAGAPFKAGGRKNDPTGYTEVDKGELTFRNAADLYLYPNTLVVVKATGAE
                     LKEWLECSAGMFKQIDVASDKPQYLLDWTGFRTYNYDVIDGVSYQFDITQPARYDGEC
                     KLINPNSHRVVNLTFDGKPVDPKQEFLIATNNYRAYGAKFPGTGDKHIVFAAPDENRQ
                     VLANYITTESKAHGQVSPKADNNWRIAPISSNAKLDIRFETSPTDKAKAFIKENAQYP
                     MEYIENDETGFAVYRIDLTK"
     gene            complement(2037..3515)
                     /locus_tag="PXE50_002515"
     CDS             complement(2037..3515)
                     /locus_tag="PXE50_002515"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HDL5623360.1"
                     /translation="MDSILGKKINSTAIPSLLCDFYKTSHRIQYPEGSQFLYSTFTPR
                     SNIYAPFVTRVVSFGFQAFILKYLIHYFNDNFFSRSQHDVVSEYTQFISDTLNIEDSG
                     EHIAQLHQLGYLPIRIKAIPEGKSVAVKVPLMTIENTHSSFFWLTNYLETLINVSLWQ
                     PITSASIAFAYRKALAEFSEQTCDDNSHLPFQAHDFSMRGMSSLESAESSGAGHLTSF
                     LGTDTIPAISFVTAYYGSQHLIGTSIPASEHSVMSSHGVDELPTFRYLMAKYPNNMLS
                     IVADTTDFWHNITVNLPLLKQEILARPESAKLVIRPDSGDFFTIICGNNSSPVEHERK
                     GLIECLWDIFGGSINQKGYKVLNPHIGAIYGDGVTYDKMIRILEGLTAKGFASSNIVF
                     GVGAQTYQRNTRDTLGFAIKATSITINGVEKAIFKAPKTDNGLKKSQKGRVKVISYDH
                     YVDELTALDDFSDDLLEVVFENGKLVKSTNFDEIRQNIAQQF"
BASE COUNT         1177 a          668 c          712 g          975 t
ORIGIN      
        1 gaaaatttat ccagcttggt gcaactgcaa tgcttgtatt ggggacacaa ccgtctgcat
       61 ttgcacaaac agccaaaaat aaagctggct tgcgtgtcat cgccactacg gatattcacg
      121 gtttcttaac tgattttgat tattacaaag atgctccaac agaaaagttt ggttttaccc
      181 gtacggcaag cctaattaaa caagctagag cagaagttaa aaacagtgtg ttagtcgata
      241 atggtgactt aattcaaggt aatcctattt ctgactacca gtcaaccaaa ggtgcaaaag
      301 agggcaaacc tgaaccttcg attatggcat taaatgcgat gcaatatgaa gtcggaacgc
      361 tgggaaatca tgaatttaac tacggtttaa gctatttaga taatgctatt aagcaagcaa
      421 aattccctat tgtcaatgca aacattgtga agccggggac agatgaacca ttctttacac
      481 cttatgttat tcaacaaaaa gaaattgtag atgaaaaagg gaataagcat accattaaga
      541 ttggttatat cggttttgta ccaccacaag tgatgatttg ggataaagct aatcttgaag
      601 gaaaagttga agctcgagat attgtgaaga ccgcacaaaa atatgtgcct atagtaaaaa
      661 aagaaggggc agatattgtc gttgcattgg cacataccgg cccttcagac gaaccctata
      721 aagaaggcgc tgagaactgt gcgttttatc tagctgatgt aaaaggtatt gatgcagtta
      781 ttttcgggca ttcacatcgc ctgttcccaa ataaagaatt tgcaaattca ccaaatgccg
      841 atattgcaaa aggaacaatg aaaggcgtac cggaaagtat ggctggctac tggggaaata
      901 acatcagtgt gattgattta agcttggccg aaaacgatgg taaatggggc gttgtggacg
      961 gtagagcaga gttgcgtcca atttataata cggaagagaa aaaagcaacc gttgagaacc
     1021 accctgaaat cgttgcatta ttaaaagaaa cccatgaagc aacccgtcaa tttgtgtctc
     1081 aacctatcgg taaagcaact gataatatgt atagttacct tgcgttagtt caagatgacc
     1141 ctaccattca aattgtgaac caagctcaaa aagcgtatgt agaaaatgtg gtaaaaggct
     1201 tgccggagct tgcaggatta ccaattctaa gtgccggagc accgtttaaa gccggtggac
     1261 gtaaaaatga cccgacaggc tataccgaag tcgataaagg cgaattaact ttccgcaatg
     1321 cggcagactt atacctttac ccaaatacct tagtggtggt taaagcaaca ggagcagaat
     1381 taaaagagtg gttagagtgc agtgcaggaa tgttcaaaca aattgatgtc gcttcggata
     1441 aaccgcaata tttactggat tggacaggtt tccgcaccta taactacgat gtaattgacg
     1501 gtgtcagcta tcaatttgat ataacccaac cggctcgtta tgacggcgag tgcaaattga
     1561 tcaaccctaa ttcgcaccgt gtggtgaact taacctttga cggcaaaccg gttgatccta
     1621 aacaagaatt cttaattgcc accaacaatt accgtgctta tggagcaaaa ttcccgggaa
     1681 caggcgataa acatattgtg ttcgccgcac cggacgaaaa ccgccaagtg ttagcgaatt
     1741 atattaccac cgaaagtaaa gctcacgggc aggtaagtcc gaaagcggat aacaactggc
     1801 gtattgcacc aattagctca aatgcaaaat tggatattcg ttttgaaacc tctccaacag
     1861 ataaagctaa agctttcatt aaggaaaatg cacaatatcc gatggagtat atcgaaaacg
     1921 atgaaaccgg cttcgcagtt taccgtattg atttaaccaa ataatcagag ctaaatacaa
     1981 gcggtctaat ttgcaaaaaa attaacaaat ttgaccgctt gtttcattcc atttttctaa
     2041 aattgttgtg ctatattttg ccgaatttca tcaaaattgg tcgatttgac caacttacca
     2101 ttttcaaaaa ccacctctaa aagatcatct gaaaaatcat ccagtgcggt tagctcgtca
     2161 acataatgat cataagagat tacttttact cgcccttttt gcgatttttt taagccgtta
     2221 tcggttttag gagctttgaa aattgccttt tcgacaccgt taattgtaat tgaagtcgct
     2281 ttgattgcaa aacccagcgt atcacgagta ttgcgttgat aagtttgagc cccaacgcca
     2341 aacacaatat tgctggaagc aaaacctttt gccgttaagc cctctaaaat ccgtatcatt
     2401 ttatcataag tgacgccgtc accataaatt gccccaatat gcggattaag cactttataa
     2461 cctttttggt taatactacc accaaaaata tcccacaaac actcaatcag acctttgcgt
     2521 tcgtgttcaa cgggggagga attgttaccg caaataattg taaaaaaatc accgctatca
     2581 gggcggataa ccaattttgc tgattccggt cgagctaaaa tttcttgttt taataatggc
     2641 aaattaacgg tgatgttatg ccagaaatcg gttgtatctg ccacaataga tagcatatta
     2701 tttggatatt ttgccattaa ataacggaaa gtcggcagct catcaacacc gtgtgaactc
     2761 atcaccgaat gttctgatgc cggaatagat gtaccgatta aatgttgaga accataatag
     2821 gctgtcacga atgaaattgc aggaatggta tctgtgccta aaaatgaggt tagatgtccg
     2881 gcaccggagc tttctgctga ttctaaggaa ctcattccac gcatagagaa atcgtgtgcc
     2941 tggaagggta gatggctatt atcatcacag gtttgctctg aaaattcggc tagagcctta
     3001 cgataagcaa atgcaatgga agctgatgta ataggctgcc ataatgacac attaatcagg
     3061 gtttccaaat aattagtcag ccaaaaaaag cttgagtgag tgttttcaat tgtcattaaa
     3121 ggaactttca ctgcaacaga ttttccttct ggaatagctt taattctgat aggtaagtaa
     3181 ccgagctgat gcaattgtgc aatatgttcg ccagagtcct caatattcaa tgtgtcagaa
     3241 ataaattgag tatattcaga aacaacgtca tgttgtgagc gagaaaaaaa attatcgtta
     3301 aaataatgaa tcaagtattt taaaataaat gcctgaaagc caaatgatac aacacgtgta
     3361 acaaatggag cataaatatt actacgaggt gtgaatgtac tatataaaaa ctgagaacct
     3421 tcaggatatt gaattcgatg tgaagtttta taaaaatcac ataatagtga tggtattgca
     3481 gttgaattaa tttttttacc caaaatacta tccattttct taaagtcctt at
//
LOCUS       DANLZQ010000157         3373 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.158, whole genome shotgun sequence.
ACCESSION   DANLZQ010000157 DANLZQ010000000
VERSION     DANLZQ010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3373)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3373)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3373
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.158"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(130..252)
                     /locus_tag="PXE50_002516"
     CDS             complement(130..252)
                     /locus_tag="PXE50_002516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="entericidin A/B family lipoprotein"
                     /protein_id="HDL5623361.1"
                     /translation="MKKLVLTILAAATFLTACNTVDGVGEDVEKAGDKIQQAAQ"
     gene            complement(332..1309)
                     /gene="rluD"
                     /locus_tag="PXE50_002517"
     CDS             complement(332..1309)
                     /gene="rluD"
                     /locus_tag="PXE50_002517"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HDL5623362.1"
                     /translation="MTQQKILTAEITADLLGARLDQALAQLFPDYSRSRIKVWIESDL
                     VKVNGNIVNKAREKVFGGETVEITAEIEEEIRFEPQDIPLNIVYEDDDIIVINKPKDL
                     VVHPGAGNPDGTVLNALLHYYPPIAEVPRAGIVHRLDKDTTGLMVVAKNIPAQTHLVT
                     ALQKRRITREYEAIASGIMTQGGKVDEPMARHPTKRTAMAVHPMGKPAVTHYRIMERF
                     RNYTRLRLRLETGRTHQIRVHMAHIAHPLLGDQLYGGRPRPPKGASDSFLSVLRGFQR
                     QALHATMLRLEHPITGEMMEWHAPLPDDFIELIQALKADYELYKDQLDY"
     gene            1450..2229
                     /locus_tag="PXE50_002518"
     CDS             1450..2229
                     /locus_tag="PXE50_002518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HDL5623363.1"
                     /translation="MRKFKSLATLVLAGLFVAGCSNSNKELEQSNVQDLYGKGQTYLQ
                     DGDYNSAIRYLEAVGTKGGQYSGLGEQTQLSLIYAQYKVGEYYKALDAAERFARSYPN
                     AANMDYVFYLAGLSNARLSDNFIQDFFGVNRASRAVDNVRNAYGNFQTIVQRYPQSQY
                     AQDAQNWMNYLFNRLAEHELAVVKFYDERNAYVAVVNRIEEMLRFYPNTLATKQALPY
                     LKEAYKQMNIPDAEQKTELLIQEYESKELPNPEKLKYGEQF"
     gene            2302..3333
                     /gene="tsaD"
                     /locus_tag="PXE50_002519"
     CDS             2302..3333
                     /gene="tsaD"
                     /locus_tag="PXE50_002519"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HDL5623364.1"
                     /translation="MRILGIETSCDETGVAIYDEDKGLVANQLYSQIDMHADYGGVVP
                     ELASRDHIRKTLPLIQEALKEANLQPSDIDGIAYTAGPGLVGALLVGSTIARSLAYAW
                     NVPALGVHHMEGHLLAPMLEENAPEFPFVALLISGGHTQLVKVDGVGQYELLGESIDD
                     AAGEAFDKTGKLLGLDYPAGVAMSKLAESGTPNRFKFPRPMTDRPGLDFSFSGLKTFA
                     ANTIKANLNENGELDEQTKCDIAHAFQQAVVDTILIKCKRALEQTGYKRLVMAGGVSA
                     NKQLRADLAEMMKKLKGEVFYPRPQFCTDNGAMIAYTGFLRLKNDEQTDLSISVKPRW
                     AMTELPPIN"
BASE COUNT         1001 a          721 c          660 g          991 t
ORIGIN      
        1 tttagcccta ttttttattc caagagtaag cggtaaaatt taccgtattt ttcgcaaaaa
       61 tataccttat tgaacaattg ttcaataagg tatatatatt attagcttct tagaattcga
      121 agctttttgt tattgtgcag cctgctgaat tttatcgccc gctttttcaa catcctcacc
      181 aacaccatca acggtattac acgcagtcaa gaaagttgca gctgctaaaa tagttaatac
      241 taattttttc atagaaagct ccttttttgt tgtttactta tgaaaacgat ttcaatatag
      301 caactttaca ttatttaagc aacacctaaa cttaataatc taattgatct ttataaagct
      361 cataatccgc ttttagtgcc tgaatcaatt caataaaatc atcaggtaac ggggcgtgcc
      421 actccatcat ttcaccagta atcggatgct ctaatctcaa cattgtggcg tgtaaggctt
      481 ggcgttggaa gcctcgtaac accgataaaa acgagtcact cgcaccttta ggtgggcgag
      541 gtctaccgcc atagagctga tcacctaata atgggtgagc aatatgcgcc atatgtaccc
      601 gaatttggtg agtacgccct gtttctaatc ttaaacgtaa acgtgtgtaa ttacgaaaac
      661 gctccataat acgataatgc gtaaccgccg gttttcccat tgggtgaaca gccattgccg
      721 tacgtttagt tgggtggcga gccattggct catcaacttt tccgccctgt gtcataatgc
      781 cgctggcaat cgcttcatat tcacgggtaa tacgacgttt ttgtaatgcg gttactaagt
      841 gagtctgtgc cggaatgttt ttagccacta ccattaagcc tgtcgtgtct ttatccaatc
      901 ggtgaacaat ccctgctcga ggcacttctg caatcggtgg ataataatgt agcaaagcat
      961 tcagcactgt accgtccgga ttaccagccc ctgggtgaac cactaaatcc ttcggtttat
     1021 taatgacgat aatatcgtca tcttcataca caatatttag aggaatatct tgaggctcaa
     1081 aacgaatttc ctcttctatt tcagcggtaa tttcaacagt ttcaccacca aatacttttt
     1141 cccttgcttt attcacgata ttgccattaa ctttcactag atcactttca atccacactt
     1201 taatgcgtga acgagaatag tccggaaaaa gttgtgccag agcctgatct aggcgagcac
     1261 ctagtaaatc tgcagtaatt tctgctgtta aaatcttttg ttgagtcatt aaaccataaa
     1321 tcctaattag tcatttgctt acttgcgtga tgttatatag aatagcgaga tgaacttcat
     1381 aagttattct tagtcagagg acattgtaca ttaacttttc gtcctagaca ctttttatag
     1441 gtaaaacata tgcgtaaatt taaatctctt gccacattag tattagccgg actgtttgtt
     1501 gcaggttgtt caaattcaaa taaagaatta gaacaatcca acgttcaaga tctttatggc
     1561 aaaggtcaga cctatttaca agatggagat tataattctg ccattcgcta cttagaagcg
     1621 gttggaacca aaggaggcca atattcagga cttggtgagc aaacccaact aagtttaatt
     1681 tatgctcaat ataaagttgg cgaatactat aaagcacttg atgccgcaga acgttttgct
     1741 cgctcttacc cgaatgcagc taatatggat tacgtattct atctagcagg attatcaaat
     1801 gcacgtctaa gtgataattt tattcaagac ttctttggtg taaatcgcgc ctctcgagcc
     1861 gtagataatg ttcgtaatgc ttacggtaac ttccaaacta ttgtacagcg ctaccctcaa
     1921 agccaatatg cacaagatgc tcaaaattgg atgaattact tatttaaccg tttagcggaa
     1981 cacgaattag ccgttgttaa attttatgat gaacgtaatg cctatgtggc tgtagtaaac
     2041 cgtatcgaag aaatgttgcg tttttacccg aatacactgg caaccaaaca agcattgcca
     2101 tacttaaaag aagcatataa gcaaatgaat atcccagatg cagagcaaaa aacggaactc
     2161 ttgatccaag aatatgaaag caaagagcta ccgaatcctg aaaaactgaa gtatggcgaa
     2221 caattctagt cgtacagaga ataatgtgag gggcgttctt cgcccctttt ggttttctaa
     2281 cttattttga cttctccaac tatgcgaatt ttaggtattg aaacctcttg tgatgaaacc
     2341 ggtgttgcca tttatgatga agacaaaggc ttagtggcaa accagcttta tagccaaatt
     2401 gatatgcacg ccgattacgg tggcgtagtc cctgaactgg cttctcgaga ccatatccgt
     2461 aaaacgttgc cactaattca agaagcctta aaagaggcca atctgcaacc ctcggatatt
     2521 gacggcattg cctatactgc cggcccaggc ttggtcgggg ctttattggt cggctcaacc
     2581 attgcccgtt cgctggctta tgcttggaat gttccggcat tgggcgttca ccatatggaa
     2641 gggcatttac ttgccccaat gttggaagaa aatgcccctg aatttccgtt tgtggcatta
     2701 ttgatttcag gtggacacac ccaactggta aaagttgacg gcgttgggca atacgaacta
     2761 ctcggggaat caattgatga tgctgccggt gaagcctttg acaaaacagg caaactactc
     2821 ggtttggatt accctgccgg tgtagcgatg tcaaaattag ccgaatccgg cacgccaaat
     2881 cgttttaaat tccctcgtcc aatgaccgac agaccgggac tggatttcag tttctccggt
     2941 ttaaaaacct ttgctgcgaa tacgattaaa gccaatctta atgaaaatgg tgaactcgat
     3001 gagcaaacca aatgcgatat tgcccacgca ttccaacaag ccgtggttga tactatttta
     3061 attaaatgca agcgagcgtt agagcaaacc ggctataaac gcttagtaat ggcaggcggc
     3121 gtaagtgcca ataaacaatt acgagcagac cttgcggaaa tgatgaaaaa attaaaaggc
     3181 gaagtattct accctcgccc acaattttgc actgacaacg gcgcaatgat tgcctacact
     3241 ggctttcttc gcttaaaaaa cgatgaacaa accgacttaa gcattagcgt aaaaccccgc
     3301 tgggctatga ccgaattacc accgattaat taacctttca agcggtgaaa tttcttgtta
     3361 attttgcaaa aat
//
LOCUS       DANLZQ010000158         3336 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.159, whole genome shotgun sequence.
ACCESSION   DANLZQ010000158 DANLZQ010000000
VERSION     DANLZQ010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3336)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3336)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3336
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.159"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            54..1229
                     /locus_tag="PXE50_002520"
     CDS             54..1229
                     /locus_tag="PXE50_002520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012072290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HDL5623365.1"
                     /translation="MSVIKMTDLDLAGKRLFIRADLNVPVKDGKVTSDARIVATIPTL
                     KLALQKGAKVMVTSHLGRPTEGVFEEENSLQPVVDYLNASDLGVPVRLVRDYLDGVEV
                     NENEIVVLENVRINKGEKKNDPELAKKYASLCDVFVMDAFGTAHRAEGSTYGVAEYAP
                     VACAGPLLAAELDALGKALKEPQRPMLAIVGGSKVSTKLTVLDSLSKIADQLIVGGGI
                     ANTFIAAEGHAVGKSLYEEDLIPEAKRLAQVTNIPVPVDVRVGTEFSETAPATEKAVS
                     EVRADESIFDIGEKSSEQLAEIIRNSKTILWNGPVGVFEFPNFRKGTEVISNAIAEAT
                     ANGAFSIAGGGDTLAAIDLFGIKDKISYISTGGGAFLEFVEGKVLPAVEILEKRANG"
     gene            1326..2402
                     /gene="fbaA"
                     /locus_tag="PXE50_002521"
     CDS             1326..2402
                     /gene="fbaA"
                     /locus_tag="PXE50_002521"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HDL5623366.1"
                     /translation="MSLLNIVKPGVVTGDDVQKVFAYAKEHNFAIPAVNCVGSDSVNA
                     VLETAARVKSPVIVQFSNGGAQFYAGKGIKPASGARADVLGAIAGAKHVHQLAEEYGV
                     PVILHTDHAAKNLLPWIDGLLEAGEKHFAETGRPLFSSHMIDLSEEPIEENMEICREY
                     LARMDKIGMTLEIEIGVTGGEEDGVDNSDVDESKLYTQPSEVLYVYDQLSPISPRFTI
                     AAAFGNVHGVYKPGNVKLKPSILGASQEYVSKERGLPAKSLDFVFHGGSGSSREEIRE
                     AISYGAIKMNIDTDTQWAAWDGILQFYKANEAYLQGQLGNPTGPDAPNKKYYDPRVWL
                     RKMEESMSKRLEQSFEDLNCVNVL"
     gene            2503..3297
                     /locus_tag="PXE50_002522"
     CDS             2503..3297
                     /locus_tag="PXE50_002522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5623367.1"
                     /translation="MALLEVNHLNKRFVERSSLFHKQDFYAVKEVSFTLNRKETLAII
                     GENGAGKSTLAKMVAGMVGPTSGELIFRGTPLSFGDYKYRAKHIRMMFQDPNDAFDPN
                     YNIGQILDAPLRLATDLNEEERNERIFNTLKLVGMYPEQALVPISEASSGQKQRIAFA
                     RALILEPEIIIADDTINSLDFSVKTQLINLMLSVQQRQGIAYIYVGQNLGLIKHIADK
                     IMVMQSGEVVEYGLTKEVLLNPQHQITKRLIESHFGKHLSSYAWAS"
BASE COUNT         1024 a          608 c          733 g          971 t
ORIGIN      
        1 gatataatcc gaccgttatc acttttaaat tttaatctaa agaggaacaa actatgtctg
       61 ttattaaaat gactgacctt gatttagcgg gtaaacgttt atttattcgt gctgacctta
      121 acgtaccggt aaaagatggc aaagtaacat cagatgcccg tattgttgct accattccaa
      181 ccttaaaatt agcgttacaa aaaggtgcta aagtaatggt aacttcgcat ttaggtcgtc
      241 cgacagaagg cgtatttgaa gaggaaaact ctttacaacc tgtagttgat tacttaaatg
      301 catcagattt aggtgttcct gttcgtttag tgcgtgatta cttagacggt gttgaagtaa
      361 acgagaatga aatcgtggtg cttgaaaacg tgcgtattaa caaaggtgag aagaaaaacg
      421 accctgagtt agcaaaaaaa tatgcatcac tttgtgatgt gtttgtaatg gacgcattcg
      481 gtacagctca ccgtgcggaa ggttcaactt acggtgtggc agaatatgcc cctgttgcgt
      541 gtgcaggtcc gttattagcc gctgaattag atgcattagg caaagcatta aaagagccac
      601 aacgtccaat gttagcgatt gtgggtggtt ctaaagtatc tactaaatta actgtgcttg
      661 attcgctttc aaaaattgcc gaccaattaa tcgtgggcgg tggtattgcc aataccttta
      721 ttgccgcaga aggtcacgct gtgggtaaat cattatacga agaagattta atccctgaag
      781 caaaacgttt agcacaagta accaatattc ctgttccggt tgatgtgcgt gtaggtactg
      841 aattctctga aactgcaccg gcaacggaaa aagcggtgag tgaagtacga gctgatgaat
      901 caattttcga tattggtgaa aaatcgtcag agcaattagc tgaaattatc cgtaattcaa
      961 aaaccatcct ttggaatggt ccggtcggcg tgtttgagtt ccctaacttc cgtaaaggaa
     1021 cagaagtgat ttcaaatgcg attgcagaag caacggcaaa cggtgcattc tcaattgccg
     1081 gtggtggcga taccttagct gcgattgatt tattcggtat caaagacaaa atttcttaca
     1141 tttcaaccgg tggcggtgcg ttcttagaat tcgtggaagg taaagtatta ccggcagtgg
     1201 aaatcttaga aaaacgagct aacggctaac agttacaagc ggtcaaattt tgtgaaaatt
     1261 ttgcaagatt tggccgtata ttttaacaat gtgcttttgc acatttcata caaaggaaga
     1321 aaaaaatgtc attattaaac atcgtaaaac cgggtgtagt aacaggcgac gacgtacaaa
     1381 aagttttcgc ttatgctaaa gaacacaact tcgctattcc ggcagtaaac tgcgtgggtt
     1441 cagattcagt taatgccgta ttagaaacag ccgctcgtgt aaaatcaccg gtaatcgtgc
     1501 aattctcaaa tggtggtgcg cagttctatg cgggtaaagg cattaagccg gcttcaggcg
     1561 ctcgtgcaga tgtattaggg gcgattgcgg gtgcaaaaca cgttcatcaa ttagcagaag
     1621 aatatggtgt gcctgtgatt cttcacaccg accacgctgc gaaaaactta ttaccttgga
     1681 tcgatggctt acttgaagca ggcgaaaaac acttcgcaga aaccggtcgt ccgttattct
     1741 cttcacatat gatcgattta tctgaagagc caatcgaaga aaatatggaa atctgccgtg
     1801 aatatttagc ccgtatggac aaaatcggta tgacccttga aatcgaaatc ggcgtaaccg
     1861 gtggtgaaga agatggcgta gataattctg atgtagatga atctaaactt tacacccaac
     1921 cttctgaagt tttatatgtt tacgaccaat taagcccaat cagcccacgt ttcacgattg
     1981 cggcagcatt tggtaacgta cacggtgttt acaagccggg taatgtaaaa ttaaaaccat
     2041 caatcttagg tgcttcacaa gagtatgtat ctaaagagcg tggtttaccg gcaaagtcat
     2101 tagacttcgt tttccacggc ggttctggtt cttcacgtga agagattcgt gaagcaatca
     2161 gctacggtgc aatcaaaatg aacattgaca ctgacaccca atgggctgcg tgggacggta
     2221 ttcttcaatt ctacaaagca aacgaagcat atttacaagg tcaattaggt aacccgacag
     2281 gccctgatgc accaaacaaa aaatactacg atccacgtgt ttggttacgt aaaatggaag
     2341 agtctatgtc taaacgctta gagcaatctt tcgaagactt aaactgtgtg aacgttttat
     2401 aatttgcaaa aaattccata aatcaggccg cttgtataag cggtcttttt ttatttattt
     2461 tttgcggtaa actatcactt tatttccaag caccaattta ttatggcatt acttgaagtt
     2521 aatcatctga ataagcgttt tgttgaacgt agtagcctat ttcataaaca agatttttat
     2581 gcggtaaaag aagtttcttt taccctaaat cgcaaggaaa ctttagcgat tattggtgaa
     2641 aacggagctg ggaaatctac cttggctaaa atggttgctg gtatggttgg gccaacatct
     2701 ggagaactga tttttagagg aacaccgctt tcatttggcg attataaata ccgagctaag
     2761 catattcgta tgatgtttca ggaccctaac gatgcctttg atcctaatta taatatagga
     2821 caaattttag atgctccgct ccgcttggcg acagatttaa atgaagagga aagaaatgag
     2881 cgtattttta atacgctaaa attggtagga atgtatcctg agcaagcgct cgttcctatt
     2941 tcagaggctt ccagtgggca aaagcagcgt attgcgtttg ctcgtgcttt aattttagaa
     3001 ccggaaatta ttattgcgga tgatacgatt aattcactgg atttttcagt caaaacacaa
     3061 ttaattaatt taatgttaag tgtccagcag cgacaaggga ttgcttatat ttatgtgggg
     3121 caaaatttag gtctgatcaa acatattgcc gataaaataa tggtgatgca aagtggcgaa
     3181 gtagtagagt atggcttgac gaaagaggtt ttactgaatc cgcaacatca aattacgaaa
     3241 cgtttaattg aaagtcattt tggaaagcac cttagttcct atgcttgggc aagctaaatc
     3301 tttactcctg ctctaatatg attacttgat aatttt
//
LOCUS       DANLZQ010000159         3041 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.160, whole genome shotgun sequence.
ACCESSION   DANLZQ010000159 DANLZQ010000000
VERSION     DANLZQ010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3041)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3041)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3041
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.160"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            50..2338
                     /locus_tag="PXE50_002523"
     CDS             50..2338
                     /locus_tag="PXE50_002523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated helicase/endonuclease Cas3"
                     /protein_id="HDL5623368.1"
                     /translation="MEEHTIQSFYAHSGKLSDHSDWQTLLSHANNVGLLAAEFAAPFA
                     SQEIARCTGLLHDLGKYSERYQKRLHGGERVNHSTAGAKIAVERWGPLGKMMAFCIAG
                     HHAGLANGSGEGKNRSTLTQRLQEQFGYGHKDLPVLDAIWQQELNLPEKLPLPPLKPS
                     KNEPFFSYAFFIRMLYSCLVDADFLDTEAFYANLEKRPLERGNYPNLTALHQQFNQFI
                     AQFRERIATQTPNTQEAQRKAEVNRLRSEILDYAVSQAKQETGLFSLTVPTGGGKTFT
                     SMAFALEHAKQYGLCRIIYVIPFTSIIEQNAAEFRKAFGELGTEAVLEHHSTFDHDSL
                     PDKSSRDKLKLASENWDTPVVVTTAVQFFESLFADRSSRCRKLHNIVGSVIILDEAQM
                     LPLNLLRPIMAAIDELARNYQCSVVLCTATQPAIHQANGFYKGFENVREIAPNPTALF
                     EKLKRTTVKHIGIQTDVELQSKLADNPQMLIIVNNRRHARALYDSAKQLEGAYHLTTL
                     MCAKHRSQTLTEIRLRLKQNLPCRVIATSLIEAGVDVDFPLVMRAEAGLDSVAQAAGR
                     CNREGKRLSVESNVWVFQPEEQWKAPPELGLLSGCMRSTVQVHADDLLNPKAINHYFQ
                     AVYEAKGKELDKPNILKACHDAGQSLNFPFQKIAEDFRMITSHLIPVIIPFDQEAENL
                     IDRLRYADQVGGILRKLQPYTVQVPEKALAELYNAGRVETINETNFGKQFYCLIGMDL
                     YDEVAGLSWENVDFLESEKLVL"
     gene            2469..>3041
                     /locus_tag="PXE50_002524"
     CDS             2469..>3041
                     /locus_tag="PXE50_002524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623369.1"
                     /translation="MREPLLDEDELKKWLQTIFTDNLVIIVGSGLSCAEGLPGMGALA
                     DRLKERMPECLDDIDKVTWNTISDCLDSEGLEGALLKHQANETIEAAIIKITAEYVLS
                     EEQKAINKCIAENQKLKFSYLLPHISASNPKIARVITTNYDRLIEFAAEYENWGIDSM
                     MVGRYWGKHNPDLSRKLQIRDIRVKGKCPKL"
BASE COUNT          924 a          579 c          674 g          864 t
ORIGIN      
        1 ttagaggtag tattgcttgt gttaggaagg aaatattgaa ggtataaaaa tggaagaaca
       61 tactattcag tctttttatg cccattcggg gaagctttca gatcattcag attggcaaac
      121 tttactcagc cacgccaata atgttggctt gcttgccgcc gaatttgctg cgccgtttgc
      181 ttcacaagaa attgctcgct gcacggggct attgcacgat ttaggcaaat atagtgaacg
      241 ttaccaaaag cgtttacatg gcggagaacg ggtaaatcac tctactgctg gtgcaaaaat
      301 tgcagtggaa cgttgggggc ctttgggcaa aatgatggcg ttttgtatcg caggccacca
      361 cgctgggtta gcaaatggtt ctggagaagg gaaaaatcgt tctacactta cacaacgttt
      421 gcaagagcaa tttggctatg gtcataaaga tctaccggta cttgacgcta tttggcagca
      481 agaacttaat ttgcctgaaa aattgccctt accgccgtta aagccttcta aaaacgaacc
      541 tttcttttct tacgcctttt ttatccgaat gctctattct tgccttgtcg atgccgactt
      601 tcttgataca gaagcttttt atgccaatct cgaaaaaaga ccgcttgaac gaggaaatta
      661 ccccaattta accgcactcc atcagcaatt taatcaattt attgcacagt ttagggagcg
      721 aattgccact caaacgccta atacgcagga agcacaacgt aaagcggaag taaaccgctt
      781 gcggagtgaa attttggatt atgccgtatc tcaagcaaaa caggaaacag gtctgttttc
      841 tctgactgtg ccaacgggcg gtggtaaaac ctttacttca atggcgtttg cccttgagca
      901 tgctaaacag tatggtttat gccgcattat ttatgttatt ccgtttacca gcattattga
      961 acaaaatgct gcggaatttc gtaaagcttt tggcgaatta ggaacagagg cggtattgga
     1021 acatcacagc acttttgatc acgatagcct acctgataaa tcaagccgag ataagctgaa
     1081 attggcatca gaaaattggg atactcctgt tgtggttaca actgcagtgc aattctttga
     1141 aagtttgttt gccgaccgtt cttcacgctg tcgcaaattg cataatatcg tcggtagcgt
     1201 gattattttg gacgaagccc aaatgctacc gttgaattta ttacgcccaa ttatggctgc
     1261 gattgatgaa ttagctcgca attatcaatg ttcggtagtg ctttgcacag cgacacaacc
     1321 cgctattcat caagcgaacg gtttttataa aggatttgaa aatgtgcgag aaattgcccc
     1381 taatccaacc gcactttttg aaaaattgaa acgtactacg gtaaagcata tcggtattca
     1441 aacagatgtg gagttgcaaa gcaaactcgc agataaccca caaatgctga taatcgtgaa
     1501 taaccgccgt cacgcccgag cgttatatga ttcagcgaaa cagttagagg gagcttatca
     1561 cctcaccacg ctaatgtgtg ctaaacaccg ctcacaaacg ctgactgaaa ttcgtcttcg
     1621 cctaaaacaa aacctacctt gccgagtgat tgccacttct ttaattgaag ccggtgttga
     1681 tgtcgatttc ccactggtta tgcgagctga agcaggacta gattcagtgg ctcaagcagc
     1741 agggcgttgc aaccgagagg ggaaacgttt atctgtagaa agcaatgttt gggttttcca
     1801 acctgaagaa cagtggaaag caccaccaga gctaggctta ctttctggct gtatgcgttc
     1861 aacggttcag gttcacgcag atgatctact taatccgaaa gcaatcaatc attatttcca
     1921 agcggtttat gaggctaaag gaaaagagct ggataagcca aatattttaa aggcgtgtca
     1981 cgacgctggg caaagcctta atttcccatt ccaaaaaata gctgaagatt tccgaatgat
     2041 cacaagccat ttaattccgg tgattatccc tttcgaccaa gaagccgaaa accttattga
     2101 ccgtttacgc tatgcggatc aagtaggcgg tattttaaga aaactccagc cttacactgt
     2161 gcaagtaccg gaaaaagcat tagccgaact ctataacgct ggcagagttg aaaccattaa
     2221 tgaaaccaac ttcggcaaac agttttactg cttaattgga atggatttgt atgatgaagt
     2281 ggcggggttg agttgggaga atgtggattt tcttgagtcg gagaaattgg ttttatagat
     2341 gaatgtttat tttaacttct ttataagttt aattttgcat agatatactt taatatacca
     2401 aatagcctat gacgtctcgt agtaaacagc tagtttgtaa gaatagatat ttggaaggga
     2461 aacgtaaaat gagagaacca ttattagatg aagatgaatt aaaaaaatgg ttgcaaacta
     2521 tttttactga caatttggtc attattgtcg gttcgggttt gtcctgtgcc gaaggtttgc
     2581 cgggaatggg agcattagct gatagattaa aagaacgaat gcctgaatgt cttgatgata
     2641 tagataaggt aacatggaat accatttctg attgtctgga ttctgaaggc ttggaaggtg
     2701 cattgttgaa gcatcaagca aatgagacga tagaagccgc tattattaaa ataacagccg
     2761 agtatgtact ctccgaagag caaaaagcga taaacaaatg tattgctgag aatcagaagc
     2821 tcaaattttc ttatttgctt ccccatattt cagcttcaaa tcctaaaatt gcccgtgtaa
     2881 ttactactaa ttatgataga ttgattgagt ttgcggcaga gtatgaaaat tggggaatag
     2941 attcaatgat ggtcggtcgt tattggggaa aacataatcc tgatttgagt aggaaattgc
     3001 agataagaga cattagagta aaaggtaaat gtccaaaatt g
//
LOCUS       DANLZQ010000160         2913 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.161, whole genome shotgun sequence.
ACCESSION   DANLZQ010000160 DANLZQ010000000
VERSION     DANLZQ010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2913)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2913)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2913
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.161"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(<1..623)
                     /locus_tag="PXE50_002525"
     CDS             complement(<1..623)
                     /locus_tag="PXE50_002525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HDL5623370.1"
                     /translation="MKAQIELPPKLLPVFAKDYRYKGAYGGRGSGKTRAFAKMSAVSA
                     YKRAMQGESGVILCGREFMNSLEESSLEEVKQAIKSEPFLANFFDVGEKYVRTKDGRI
                     SYVFSGLRHNLDSIKSKARILIAWIDEAETVSETAWRKLIPTVRENNSEIWVTWNPEN
                     RGSATDTRFRQNPPENSCIIEMSYQDNPWFPDVLEQERLNDKQRLDDA"
     gene            complement(607..1131)
                     /locus_tag="PXE50_002526"
     CDS             complement(607..1131)
                     /locus_tag="PXE50_002526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HDL5623371.1"
                     /translation="MTKKGEVKATSKGVGKLTDKQKRFVEEYLIDLNATQAAIRAGYS
                     EKTAYSIGEENLRKPEIRSAIQEAQNKRSERTQITQDDVLNGLLEVIAMSTGKKIVTE
                     TDVAKNENGELVGFDIAKTKFEPAAANKALELLGKHLGMFKDKVDLINSDGSLNRPMV
                     IELIAPSLDDESTD"
     gene            complement(1523..1696)
                     /locus_tag="PXE50_002527"
     CDS             complement(1523..1696)
                     /locus_tag="PXE50_002527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623372.1"
                     /translation="MYPPAAYLVPCGRTEFSGRTYGDTVEYLVKVMGERDLCANQIDR
                     IREWQAQTKQGFK"
     gene            complement(1701..2051)
                     /locus_tag="PXE50_002528"
     CDS             complement(1701..2051)
                     /locus_tag="PXE50_002528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2570 domain-containing protein"
                     /protein_id="HDL5623373.1"
                     /translation="MLNWISGTIAIVILGLCVWLWGQSQMIDSLRAENRAQAQTIEQQ
                     QKANQRLTDSLEQERQAVEKIQKIANELRNKVEMAKNEITSILAQDSCAKADLPNGVA
                     DSIKRLHQQNNHKH"
     gene            complement(2024..2593)
                     /locus_tag="PXE50_002529"
     CDS             complement(2024..2593)
                     /locus_tag="PXE50_002529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HDL5623374.1"
                     /translation="MSKSLKYGSGIVCGIAAIITLVQYQHPEIRTNQAGLEIIGNAEG
                     CRRDPYKCPADVITVGIGSTEFGGEKIDPNRIYSDKEIAERWAKDLKIAESCVNRHFN
                     GKDMNDNQFSGMTSAVFNMGCYNMRFYRNKQGQYVQTTIHKLAVNKQFEEMCHRLPDF
                     IRASGKVLNGLVIRREKEKALCLTGLVAR"
     gene            complement(2586..2831)
                     /locus_tag="PXE50_002530"
     CDS             complement(2586..2831)
                     /locus_tag="PXE50_002530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623375.1"
                     /translation="MKLMKDMGTQSYIWSGFSTWLAWLGEQQNLMLLSLAIGIVTAIA
                     GLIQRFDEWRRRKREDERAEELHQAKMARLRKGLSDE"
BASE COUNT          779 a          717 c          490 g          927 t
ORIGIN      
        1 gcatcatcaa gccgctgttt gtcatttagc cgctcttgct cgagcacatc aggaaaccaa
       61 ggattatctt ggtaactcat ttcaattatg cagctgtttt caggtggatt ttgcctgaag
      121 cgagtatctg ttgcgctccc tctattttcc gggttccaag ttacccatat ttcggaatta
      181 ttctcacgca cggttggaat taatttccgc caagcagttt cgcttactgt ttctgcttca
      241 tctatccacg caatcaaaat acgggcttta gatttgatgc tatctaagtt atgccgaagt
      301 ccggaaaaca cataagaaat ccgcccatct ttagtgcgaa catacttctc gccgacatca
      361 aaaaaatttg ctaaaaaagg ctcagacttg atcgcctgtt taacttcttc aagagagctt
      421 tcttccaatg agttcataaa ctcacgaccg caaagaataa cgccactttc cccttgcatt
      481 gctcttttat aagcagacac tgccgacatt ttggcaaatg cccgagtctt gcctgaacct
      541 cgcccaccat aagcaccttt gtaacgataa tctttggcaa aaacaggcaa cagtttaggt
      601 ggtagttcaa tctgtgcttt catcgtctaa actcggagca attaattcaa tcaccatcgg
      661 tcgattcagt gaaccatcag aattaattaa atcaacctta tctttgaaca ttcctaaatg
      721 tttaccgagt aactcaagag ctttattcgc agcagcaggt tcaaactttg tttttgcaat
      781 atcaaaaccg actaactcgc cattttcatt tttcgcaaca tcagtttctg tcacaatttt
      841 tttaccagta ctcattgcaa tcacttcaag caacccattt agcacatcat cttgtgtaat
      901 ttgggttctc tccgagcgtt tattttgagc ctcctgaatt gcacttctga tttcaggttt
      961 tctcaggttc tcttctccga ttgagtatgc tgttttttcg ctgtacccag ctctaatagc
     1021 agcttgagtc gcattcaagt caatgagata ctcttctaca aatcgtttct gtttatcagt
     1081 taatttaccc acgcctttag acgtggcttt aacctcgcct tttttagtca ttgggttaaa
     1141 ttcctttact tcattgcatt taatagatta gcaatagcat taatcagctt tggcgacacg
     1201 aacgccaaaa tagggactgt tactgctagg cttatttgcc ataaaccata ttccataaga
     1261 atctccttga tggttacggt taaaaatgta ataatttcca taacttgtta ctcattccgt
     1321 ttcaatgggt aataaaaaaa cctcgaacac cgcaaatgtt cggggttttg ttttatataa
     1381 atcacatcac ttaggtattt cctcggtgtt ttatccaacc aaccccgaaa ccatagctaa
     1441 attatgtaat atttactttc catcaaaaca aaaagggagc tgttacgctc ccattttcaa
     1501 tagcggttaa ttagataatt agctatttaa acccttgttt ggtttgtgct tgccattctc
     1561 tgatacggtc aatttgatta gcacacaaat cacgctctcc catcactttg acgagatact
     1621 caaccgtatc gccataggtt ctaccgctaa attctgttcg cccacacggc acaaggtaag
     1681 ctgccggcgg atacaaatac tcagtgcttg tgattgttct gctggtgcag ccgcttaatg
     1741 ctatcagcaa cgccattagg caaatcagct ttagcacaac tgtcttgtgc cagtattgat
     1801 gtaatttcat tcttggccat ctccacttta ttccgcagct catttgcaat tttttggatt
     1861 ttttcgaccg cttgtcgctc ttgctctaag ctatcggtta gccgttgatt ggctttttgc
     1921 tgctgctcaa tggtttgggc ttgtgcgcgg ttctcagctc ttaagctatc tatcatctgt
     1981 gactgacccc ataaccatac acacaagccc aaaatcacaa tggctatcgt gccactaatc
     2041 cagttaagca taatgctttc tccttttcac ggcggataac caatccgttc aataccttac
     2101 cactggcacg aataaagtca ggtagtcgat gacacatctc ctcaaattgt ttattcactg
     2161 cgagtttatg gatggtagtc tgcacatatt gaccttgttt attccgataa aatctcatgt
     2221 tataacaacc catattaaat acagcggacg tcattcccga aaattgatta tcgttcatgt
     2281 ctttaccatt aaaatgacga ttgacacaac tctccgcaat cttcaaatct tttgcccaac
     2341 gctcagcaat ttctttgtca gaataaatac gatttgggtc aatcttttca ccgccaaact
     2401 ccgttgagcc aatgccaacc gtgattacat cggcagggca tttatacgga tcacgtctgc
     2461 aaccctcagc attaccgata atctctaatc cagcttggtt agtgcggatt tcgggatgtt
     2521 gatattggac taatgtaata atggcagcga taccacaaac gataccactg ccatatttaa
     2581 ggcttttact catcacttaa cccctttctc aatcttgcca ttttcgcttg atgaagctct
     2641 tccgctcgct catcttcacg cttacgccta cgccattcat caaatcgctg aataagccct
     2701 gcaatggcag taacaatacc gatagcaaga ctaagtaaca ttaaattctg ctgttcgccg
     2761 agccacgcca gccaagtgct aaatcccgac caaatatagc tctgcgttcc catatctttc
     2821 attaacttca tactccaccc cgtttcgagg caataaaaaa gcccagtcgt gagactgagc
     2881 tttggttaaa aattctgcta gaatactgtt ccc
//
LOCUS       DANLZQ010000161         2860 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.162, whole genome shotgun sequence.
ACCESSION   DANLZQ010000161 DANLZQ010000000
VERSION     DANLZQ010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2860)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2860)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2860
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.162"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..1094
                     /locus_tag="PXE50_002531"
     CDS             <1..1094
                     /locus_tag="PXE50_002531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="porin"
                     /protein_id="HDL5623376.1"
                     /translation="VTAFAASASATTVYDAEGSKVDFDGSLRIVLDRTNSKELDNHNV
                     VKTKKNAHTGIRNTGSRFGVRVKHDLAQDFYALGRVEFRFNKNTSDDGFGDLYTKRAY
                     VGLGSKQYGELTFGRQVTIADDLSQSVDYNYGINPKGDYIQTDGNQVIRYNYRGVENL
                     HVSANYNFAQDRKDGKVLANKLQNAYGIGALYTVDNWDLRAAYGHTNYKTATDSTKHR
                     KDGVLGSVGYKFGDLKLSVDTGYSREKGLAVTDDNGVTTFYNGVKSNAFYVSPNFEYQ
                     VVPASKVYGNYLYERVKSKSNGSTYAAGKEKTHGFLLGVDYQFHKQVVAFVEGSYTRT
                     KDYDKVTNGYKYSGKSTNKAIGVGMRVYW"
     gene            complement(1247..2611)
                     /gene="glmU"
                     /locus_tag="PXE50_002532"
     CDS             complement(1247..2611)
                     /gene="glmU"
                     /locus_tag="PXE50_002532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HDL5623377.1"
                     /translation="MTQLSVVILAAGKGTRMYSDLPKVLHPVAGKPMVKHVIDTAKQL
                     DAQQIHLIYGHGADLLKARLSEEPVNWVFQAEQLGTGHAMQQAAPFFADDENIVMLYG
                     DAPLITKATLERLIAAKPENGIALLTVELENPTGYGRIIRENGSVVAIVEQKDANEAQ
                     LKVKEVNTGVMVASGASFKKWLKNLNNNNAQGEYYITDVIAMANQEGFKVQAVQATEF
                     MEVEGANNRLQLAALERFYQKREAEKLLLAGVTIIDPSRFDLRGTVTHGKDVQIDVNV
                     ILEGEIKLGNNVKIGAGCVLKNCEIGDNVEIKPYSVIEDSIVGAKSAIGPFSRLRPGA
                     ELAEETHIGNFVEIKKATIGKGSKVNHLTYVGDAEIGKECNIGAGVITCNYDGANKFK
                     TIIGDNVFVGSDSQLIAPVTIASGSTIGAGATVTKDIAENELVISRVPQRHIQGWQRP
                     TKKK"
BASE COUNT          816 a          524 c          556 g          964 t
ORIGIN      
        1 cagtaaccgc gttcgcagcg tcagcatcag caaccaccgt ttacgatgca gaaggttcaa
       61 aagtagattt tgatggttct ttacgtattg ttcttgatag aacaaattct aaagagctag
      121 acaatcataa tgttgttaaa actaaaaaaa atgcacacac aggaatccgt aacactggtt
      181 cacgttttgg tgtaagagta aaacatgatt tagctcaaga tttctatgca ttaggtcgtg
      241 ttgagttccg ttttaacaaa aataccagtg atgatggttt tggtgattta tatactaaac
      301 gtgcttatgt tggtttaggt agtaagcaat atggtgaatt aacttttggt cgtcaagtaa
      361 cgattgctga tgatttaagt caatcagtag attacaacta cggtattaat ccaaaaggtg
      421 attatattca aaccgatggt aaccaagtta ttcgttataa ctaccgtggt gttgaaaact
      481 tacatgtaag tgcaaactat aactttgcac aagatcgtaa agatggtaaa gtattagcaa
      541 ataaacttca aaatgcatac ggcattggtg cattatacac tgtagataac tgggatttac
      601 gtgcagctta tggtcataca aactacaaaa cagctactga tagcactaag caccgtaaag
      661 atggtgtatt aggttctgtt ggttataaat ttggtgactt aaaattaagt gttgatacag
      721 gttattctcg tgagaagggt ttagctgtta cggatgataa tggtgtaact acattctata
      781 atggtgttaa atcaaacgct ttctatgtat ctccaaactt tgaatatcaa gtagtgcctg
      841 catctaaagt atatggtaac tacttatatg agcgtgtgaa atctaaatca aatggttcta
      901 catatgctgc tggtaaagaa aaaactcatg gtttcttact tggtgttgat taccaattcc
      961 ataaacaagt agttgctttt gttgagggtt cttatactcg tactaaagac tatgataaag
     1021 taactaatgg ttataaatac tcaggcaaat caactaacaa agctatcggt gttggtatgc
     1081 gtgtatactg gtaatcaatt gattttctaa attgataaac ccctaacaat atttattgtt
     1141 aggggttttg ttttaaatat attgttcatt atccttttta aagtgtatgg ctttgctgtt
     1201 attggcaaag ccaattttta aatataataa cttttgacca ctggcactat ttctttttag
     1261 tcgggcgttg ccagccttga atatggcgtt gtggtacacg gctaattacc agttcatttt
     1321 ccgcaatgtc tttagtgact gttgcaccgg caccaatggt tgaaccgctg gcaatcgtga
     1381 ccggggcaat gagttggctg tctgagccga caaatacgtt atcgccaata atggttttga
     1441 atttattcgc accatcatag ttacaagtga ttacacctgc tccgatgtta cattctttgc
     1501 cgatttccgc atcgcctaca taagtgagat gatttacttt tgaacctttg ccgatggtag
     1561 cttttttgat ttccacaaag ttaccgatat gggtttcttc cgctaattct gcccccgggc
     1621 gtaagcgaga gaatggaccg atagcggatt ttgccccgac aatcgaatct tcaatcacag
     1681 aataaggttt aatttcaaca ttatcgccaa tttcgcagtt tttcagtacg cagcctgcac
     1741 caatttttac attgttaccg agtttgattt caccttctag aatgacattc acatcgatct
     1801 gaacatcttt tccgtgggtg acagtgccac gaagatcaaa acggcttggg tcgataatag
     1861 ttacaccagc caataacagt ttttccgcct cacgtttttg gtagaaccgt tcaagtgcag
     1921 caagttgcaa acggttgttt gccccttcta cttccataaa ttcagttgcc tgaaccgctt
     1981 gtactttaaa gccttcttgg tttgccattg cgatcacatc agtgatgtaa tattcacctt
     2041 gagcattgtt gttatttagg tttttcaacc attttttgaa gctcgcaccg cttgctacca
     2101 tcacgccggt attcacttct ttgactttaa gctgtgcttc attggcatct ttttgctcaa
     2161 caatcgctac cacagaacca ttttcacgaa taattcgtcc gtagcctgtc gggttttcca
     2221 attcaacggt tagtaatgca ataccatttt ccggtttggc tgcgattaaa cgctctaaag
     2281 tggcttttgt gattaggggg gcatcaccat aaagcattac aatgttttca tcatcagcga
     2341 aaaaaggagc tgcttgttgc attgcatgtc ctgtgcctaa ttgttcggct tggaataccc
     2401 agtttacagg ctcttcgctt aaacgtgctt ttaacagatc ggcaccgtgt ccgtaaatta
     2461 aatgaatttg ctgggcatct agctgtttgg cagtatcaat aacgtgtttt accatgggtt
     2521 taccggcaac tgggtgtaac actttgggta aatctgaata catacgagtg cctttaccgg
     2581 cagctaaaat aacaacgctc agttgagtca tatagaatcc ttatttgact aaatagatga
     2641 aggcttatag taacgtgtaa attgctataa gtgatatttt tgtaatattt taaccttttt
     2701 ataagtggat ttcatcgaca agcaaaagaa atttgtctgt ttgttatctt tttctattat
     2761 gtcgattctt atcttgtgga aaactggtat aaataggtag cacttatttg tgctatctct
     2821 ctacaatagt gtatatcttt gctaaaatat taaattaatt
//
LOCUS       DANLZQ010000162         2848 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.163, whole genome shotgun sequence.
ACCESSION   DANLZQ010000162 DANLZQ010000000
VERSION     DANLZQ010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2848)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2848)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2848
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.163"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            272..565
                     /locus_tag="PXE50_002533"
     CDS             272..565
                     /locus_tag="PXE50_002533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2523 domain-containing protein"
                     /protein_id="HDL5623378.1"
                     /translation="MFKVIFMALSAIVNYLISDFLIKGVIFLSVYFLTSELLPVVIEM
                     LVSRKLIPDLNALFGQLPESMWYFLNIFQIPMAISLMISAMISRFVRRMPFIG"
     gene            575..1114
                     /locus_tag="PXE50_002534"
     CDS             575..1114
                     /locus_tag="PXE50_002534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005566788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623379.1"
                     /translation="MAVSAYIGIPGSGKSYEVVKSVILPAVASNRRVVSNIYGLNKEK
                     IHQYLLRKNKKLMIEELGEVIYVTNEQCLESDFLPSMDEQDSFCKAGDLIIIDEVWRI
                     WGNDKDIPKNHRSFIAEHRHFADPITGVTCDLVVINQDISQIPRFIKEGLRQLTECKN
                     TLVWGCVIVIGLMFFKERI"
     gene            1045..1608
                     /locus_tag="PXE50_002535"
     CDS             1045..1608
                     /locus_tag="PXE50_002535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623380.1"
                     /translation="MQKHVGLGLRNRYRVDVFQGKNLAKKNRTNSYQEKYDKKIFELY
                     KSYESDGAREAVTDSRQSIFSSFWVKVWIILLPLALFYCGYNLYIFLNGSESEVSHNT
                     EQAKFASDENHNDIVIHLLPTIGKPLSTKWRITGELKRDNKSFVILADNENRLRLEPS
                     SQFSFSGRMLQGEIDGGIVSYFSGESK"
     gene            1605..2738
                     /locus_tag="PXE50_002536"
     CDS             1605..2738
                     /locus_tag="PXE50_002536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspD"
                     /protein_id="HDL5623381.1"
                     /translation="MKIHQLGLLLMISSFSYAKNVDFKLEAVPLPKAISIIYDEVLQK
                     PYMLDPKLSNDSRVISFHTTEQQNFEQFIQRYFSNMNISVSEKKGVVYIGHIEPKQPK
                     VIKRSFVYSPIHRDVDYLASFLKDGTEGNQVFASGDKLVYYGTSEDIARVKSILKSID
                     TKSREVVVTGYVFEVQNIEKEGSGINLLAKLLSGKLGISVGYKQSYENFITVNAGSLD
                     AMFELFRTDQRFRVVSSPTLRVKSGSRGNFSVGSDVPVLSNVTYQDGRPIQSIEYRSS
                     GVIFDIQPTIKDKAIDLKIQQLSNFIKTDTGVNNSPTLVKRDLVTDVTVKSGDVIVLG
                     GLAENKISNGETSFSLLPKGWLSGKSNENTKTDIIVLLQVKEI"
BASE COUNT          960 a          383 c          567 g          938 t
ORIGIN      
        1 atattaattt gcctgatctg gaagttccta cggcggaatc aattatatcc ccttttaaaa
       61 aattgctacc agatttacag aattttgaac tgaataaacg aaccgcacaa tgccctgttt
      121 ggacatttaa tattgaatac ttgagatttc attatgaact tagagaacat tgcgatttga
      181 tagaaccaca taaagaaatc ttaaagctat tattcggcat tatttgggcg tttattgctt
      241 tacgttatgt attaagtgct taggaggata aatgtttaaa gtgattttta tggcactatc
      301 agcaattgtg aattatttga tttcagattt tttaattaag ggtgtcatat ttttatctgt
      361 ctatttttta acttctgaac tacttcctgt agtaatagag atgcttgtgt ctagaaaatt
      421 gatacctgat ttaaatgcgt tatttgggca attgcctgaa agtatgtggt attttttaaa
      481 tatttttcag ataccaatgg ctatttcttt aatgatttca gcaatgattt cacgttttgt
      541 tagacgtatg ccatttattg gatagaggag tgctatggct gtttcagcgt atatagggat
      601 tcctggaagc ggcaaatcgt atgaagtggt taagtcagta attttacctg ctgttgcttc
      661 gaatcgaaga gttgtttcca acatttatgg attaaataaa gagaaaattc atcaatattt
      721 actgcgtaaa aataaaaaat taatgattga agagcttggt gaagtcatat atgtaacgaa
      781 tgaacaatgc ttggaatcgg attttttacc atcaatggac gaacaagatt cattttgcaa
      841 agctggggac ttgataatta ttgatgaagt ttggcgtatt tggggaaacg acaaggatat
      901 tccaaaaaat catcgttcat ttattgctga acatcgacat tttgcagatc ctataacagg
      961 tgtaacttgt gatttagtcg taataaatca agatatttct caaattccaa gatttattaa
     1021 agaaggattg agacaactta ccgaatgcaa aaacacgttg gtttggggtt gcgtaatcgt
     1081 tatcgggttg atgtttttca aggaaagaat ttagctaaaa agaaccggac aaattcttat
     1141 caagaaaaat atgataaaaa aatatttgag ctttataaat cttatgaatc tgatggtgca
     1201 agagaagcgg ttacagatag taggcaatct atattttcat ctttttgggt caaggtatgg
     1261 attattcttt taccattggc attattttat tgtggctata acctttacat tttcctaaat
     1321 ggttcagaga gtgaagtaag ccataatact gaacaggcta aatttgcttc tgatgaaaac
     1381 cataacgata tagtaattca tttacttcct actattggaa aacctttatc aactaaatgg
     1441 cgaataacag gggaactaaa aagggataat aaatcatttg tgatcttagc tgacaatgaa
     1501 aaccgtttaa gacttgagcc tagtagccag tttagtttta gcggtcgaat gttgcaagga
     1561 gagatagatg gtggaatagt tagttatttt tcgggagaat ctaaatgaaa atccatcaat
     1621 tagggctatt gctcatgatt agctcatttt cttatgctaa gaatgttgat tttaaattag
     1681 aagctgtgcc gttaccgaaa gcaatatcaa taatatacga tgaagtgcta caaaagccat
     1741 atatgcttga tcctaaatta tctaatgatt caagggttat tagctttcat acaacagagc
     1801 aacagaattt tgagcagttt attcaacggt atttcagcaa tatgaatatc agtgtatcag
     1861 agaaaaaagg tgttgtttat attggacata ttgaaccaaa acagccgaaa gtaataaaac
     1921 gtagttttgt gtattcgcct attcatcgtg atgttgatta tttggctagc ttcctgaaag
     1981 atggaacaga aggaaaccaa gtttttgcaa gtggcgacaa gcttgtatat tatggtactt
     2041 ctgaagatat tgcacgagtg aaaagtatct tgaaatcaat cgacacaaaa agccgtgaag
     2101 tagtggtaac tggttatgtt tttgaagtgc agaatattga aaaagagggt agtggcataa
     2161 acttgttagc gaaattgcta tcaggaaaat taggcattag tgttggttac aagcaaagtt
     2221 atgaaaactt tatcaccgtg aatgcaggaa gtttagatgc aatgtttgaa ttgtttcgca
     2281 cagatcagcg ttttagggtt gtcagcagtc cgacattaag agtaaaatca ggctcaagag
     2341 gtaatttttc agtaggctct gatgtccctg tattatcgaa tgtaacctat caggacggaa
     2401 ggcctattca gtcgattgaa taccgttcaa gcggtgtaat atttgatatt cagccaacga
     2461 taaaagataa agcgattgat ttaaaaattc aacaactatc aaatttcatc aaaacagata
     2521 ccggtgtaaa taatagccca acgttggtaa agcgtgatct ggtaacagat gttacggtta
     2581 aaagcggtga tgttatcgtt ttaggtgggt tagctgaaaa taaaatatct aatggcgaaa
     2641 ccagtttttc attgctacct aaaggttggt taagtggaaa atcaaatgaa aatactaaaa
     2701 cagatattat agttctgcta caagtaaagg aaatttaata tgtatgagga aaatttagat
     2761 tataaattgt cattaaatga atttaagtcg cttttgtcag atttagacaa acaaatagat
     2821 gagaaatata gagaatcttt tcattgtg
//
LOCUS       DANLZQ010000163         2703 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.164, whole genome shotgun sequence.
ACCESSION   DANLZQ010000163 DANLZQ010000000
VERSION     DANLZQ010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2703)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2703)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2703
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.164"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..1311
                     /gene="cpxA"
                     /locus_tag="PXE50_002537"
     CDS             <1..1311
                     /gene="cpxA"
                     /locus_tag="PXE50_002537"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress sensor histidine kinase CpxA"
                     /protein_id="HDL5623382.1"
                     /translation="LILFITIAFNLDKFDARKFSPLSAKDQIFFKNESFETGKSLNLD
                     EVFDRNLSVETPNGFDVILEDKKTGNLSGVNQSNIKALQFFIYQSQQTEEPLQRRFEN
                     SEIYGPFVVKSENHTYNQYFIKAVDAQKEWINTILDSPFIMAVLLMFAGIPLLIWLSF
                     KITKPVKELTISANAVASGNLETNPKLEAEWIYEIGEVGKSFNHMVISLKNLTQQQQR
                     MISDISHELKTPLARLQLAIAILRRKTCGLAEIDRIEAEVGKLDQLIKDLLTISREQL
                     NYQIHKKIFVIDEIWNNVIEDAKFETSQNNIIFIIKQNIKNPESYSINGAVGLLASAL
                     ENLIRNGQKYAKKMLSVSMNVEDGHLFLTVEDDGEGVPENEYENILKPFYRVDEARAR
                     ETGGAGLGLAIVQNVVKQHQGTIHLDKSNMGGLKIELKLPLWRS"
     gene            1361..>2703
                     /locus_tag="PXE50_002538"
     CDS             1361..>2703
                     /locus_tag="PXE50_002538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDL5623383.1"
                     /translation="MKLIEIENLNKYFGLGQTRAHILKNINLSIERGDFVAIIGASGS
                     GKSTLMNIIGCLDTASSGICRIDGKETQTMSADELSDLRQRKLGFIFQRYNLLSALNA
                     NENVALPAIYAGMDSSSRKKRADTLLTKLGLSDKTQHKPNELSGGQQQRVSIARALMN
                     GGEIILADEPTGALDSKSGETVLEILRDLHYEGHTIIMVTHDPNIAAQASRIVEIKDG
                     QIIRDERQRTDVQETALNKTTTQKPRFWNQLFESFKMATSAIMAHKMRAILTMLGIII
                     GITSVISVVALGRGSQQQILSNINNLGTNTMDIMNGTGFGDRRANLTKNLTISDALML
                     SRQNYVESTTPSSNVSATLIYGNTAVTGSVRGVGEQFIDVKGLKLISGRFFSAEEVKN
                     VAQVIVIDPNTQKDLGLTEPVEGKTILVDKKPLQIIGVAQQSNNMNQSSLTLWAP"
BASE COUNT          937 a          478 c          529 g          759 t
ORIGIN      
        1 cttatattat ttattaccat tgcatttaat ttagataaat ttgatgctcg caaattttct
       61 cccctttctg caaaagacca aattttcttt aaaaatgaaa gctttgaaac agggaaaagc
      121 ttaaatttag atgaagtttt tgatagaaat ttatcagttg aaacacctaa tggatttgat
      181 gtaatcctag aagataaaaa aactggtaat ttaagtggcg taaaccaaag taatattaaa
      241 gcattgcagt tttttattta tcaatcacaa cagactgaag agccgttaca aagacggttt
      301 gaaaatagtg aaatctatgg tccatttgtc gtgaaatccg aaaaccatac ttataaccaa
      361 tattttatta aagcggtaga tgctcaaaaa gagtggatta atacgatttt agactcacct
      421 tttattatgg cagtattact tatgtttgcc ggaattcctt tattaatatg gttatccttt
      481 aaaattacca aaccggttaa agaattaact atctcggcaa atgcggtagc ctctggtaat
      541 ttggaaacta atcctaaatt agaagcagaa tggatctatg aaattgggga agttggaaaa
      601 agctttaatc atatggtgat aagcttaaaa aacttaactc agcagcaaca aagaatgatt
      661 tcggatatat ctcatgagtt aaaaacacct ttagccagat tacaactcgc tattgctata
      721 ttacgccgta aaacctgtgg tctggcagaa atcgatcgca ttgaagcaga agtaggtaaa
      781 ttagaccaat tgattaaaga cttgttaaca atatcacgtg aacaattaaa ttatcaaatt
      841 cataaaaaaa tttttgtaat tgatgaaatt tggaataatg taattgaaga tgctaaattt
      901 gaaacctcac aaaataatat tatttttatc atcaagcaaa acatcaaaaa ccccgaatct
      961 tattctatta acggggccgt aggtttactg gctagtgctt tagaaaattt gatccgaaac
     1021 ggccaaaaat atgcaaaaaa aatgctgtcg gtctcaatga atgtagaaga tggtcattta
     1081 tttctcacag ttgaagatga tggcgagggg gttcctgaaa acgaatatga aaatattctt
     1141 aaaccttttt accgcgtaga tgaagcaagg gcaagagaaa caggaggagc cgggctagga
     1201 ttagcgattg tgcaaaatgt agttaaacag caccaaggta ctattcattt agataaaagt
     1261 aatatgggag gattaaaaat cgaactgaaa cttccccttt ggcgttccta aggcaaaaag
     1321 catatcgttt gtaaaaaaca gtcgaaaaat aaccgcttgt atgaaattaa ttgaaataga
     1381 aaatctcaat aaatactttg gcttggggca aacccgagcc catattctaa aaaatatcaa
     1441 tctcagtatt gaacggggtg attttgtcgc aattataggt gcttcaggtt ctggcaaatc
     1501 taccttaatg aacattattg gctgtttaga tactgccagc tcaggtattt gccgtattga
     1561 tggcaaagag acccaaacaa tgtctgcaga tgaactgtct gatttacgcc aacgtaaact
     1621 ggggtttatt ttccaacgct ataatctcct ttcagctttg aatgcaaacg aaaatgttgc
     1681 cctacctgca atttacgccg gaatggatag ctcatcacgc aaaaaacgag ctgatacgtt
     1741 attaacgaag ttaggattat cagataaaac ccaacataag ccgaatgagt tatctggggg
     1801 gcaacagcaa cgagtcagca ttgcacgagc cttaatgaac ggcggtgaaa tcattcttgc
     1861 agacgagcct accggtgcat tagattctaa aagtggcgaa actgtattgg aaatcttgcg
     1921 agatctacac tacgaaggtc ataccattat tatggtaaca cacgacccaa acattgccgc
     1981 tcaagccagc cgtatcgttg aaattaaaga tgggcaaatc attcgagatg aacgccaacg
     2041 tactgatgtt caagaaacgg ctctcaataa aacgacaaca caaaaacctc gcttttggaa
     2101 tcaactgttt gaatccttca aaatggcaac cagtgcaatt atggcgcata aaatgcgggc
     2161 aatcctcacg atgctgggca ttattattgg cattacctct gtgatttccg tagtcgctct
     2221 cggtcgaggc tcgcaacaac aaatcctttc taatatcaac aacctaggca caaatacgat
     2281 ggatattatg aatggaaccg gctttggcga tagaagagcc aatctgacta agaatttaac
     2341 catcagtgat gccttaatgt tgagtcggca aaactatgtg gaaagcacta ctccttcaag
     2401 caatgtcagt gccacattga tttatggtaa taccgcagta accggttcag tacgaggtgt
     2461 tggagagcaa tttattgatg tgaaaggatt aaagctgatt tcagggcgct ttttcagtgc
     2521 cgaggaagta aaaaatgtag cgcaggttat tgtaattgac cctaacactc aaaaagattt
     2581 ggggctaaca gagcctgttg aaggtaaaac gattttagtg gataaaaaac cgttacaaat
     2641 cattggtgtg gcgcaacagt caaacaatat gaaccaaagt agccttacct tatgggcgcc
     2701 tta
//
LOCUS       DANLZQ010000164         2689 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.165, whole genome shotgun sequence.
ACCESSION   DANLZQ010000164 DANLZQ010000000
VERSION     DANLZQ010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2689)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2689)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2689
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.165"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(164..1402)
                     /gene="pepT"
                     /locus_tag="PXE50_002539"
     CDS             complement(164..1402)
                     /gene="pepT"
                     /locus_tag="PXE50_002539"
                     /EC_number="3.4.11.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase T"
                     /protein_id="HDL5623384.1"
                     /translation="MKQSLLNRLLRYTQIHTTSDPKSQTVPSSQQQWDLLHLLKTEVE
                     AMGLSEIYLDPNGYLFASLPANIDKTLPVLGLIAHVDTSPDFNGENVKPQVIEAYQGG
                     NILLNGSGDYLSPTDFPNLNKLIGDTLVTTDGTSLLGADDKSGIAIILSAIEYLQANP
                     HIPHGKIRIGFTTDEEIGRGADHFDVNAFGADVAFTFDGGPLGELQYENFNADAATVT
                     FFGRSVHPGTAKGKMINALERACEFQHRLPPHLTPATSEGREGFIMLHGIEGGIDKAE
                     IHYILRSFERDELAAFGKMLNDTLAEMQQIYGEHCGKVEIVEQYRNMREVLDDYGYLV
                     EIAENAMREQGIEPNLEPIRGGTDGSRLSFMGLPCPNLFTGGENFHGRFEFISVDTME
                     KATKVVIDICRKFADYDFNK"
     gene            complement(1422..1811)
                     /locus_tag="PXE50_002540"
     CDS             complement(1422..1811)
                     /locus_tag="PXE50_002540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HDL5623385.1"
                     /translation="MYMLDTNTVSYFFRGNANVVAKLKSINPERLCISSVTAAELVYG
                     VAKRNNGQLSQFLDYFLSSVKVLDWNYRCAELYGKLRAEMEKNGKVMGVQDQMIASHA
                     LAEECILVSSDQAFKMVPDLKLENWLH"
     gene            complement(1812..2072)
                     /locus_tag="PXE50_002541"
     CDS             complement(1812..2072)
                     /locus_tag="PXE50_002541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HDL5623386.1"
                     /translation="MEKIARLFRNGRNQAVRLPVEFEFDAEQVYVSKKENGDILLSLR
                     SRNTEHWQRLFELLPAVVCDETFLDTKERNQSFEQRDPFEVA"
     gene            complement(2188..2400)
                     /locus_tag="PXE50_002542"
     CDS             complement(2188..2400)
                     /locus_tag="PXE50_002542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HDL5623387.1"
                     /translation="MRDEYDFSNAVKNPYAKGLKSKSVVTIRIEDDVISYFKQLAEEV
                     NLPYQTLINLYLKDCVEQKRKPTISW"
     gene            complement(2401..2688)
                     /locus_tag="PXE50_002543"
     CDS             complement(2401..2688)
                     /locus_tag="PXE50_002543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HDL5623388.1"
                     /translation="MEEINGFEWDSEKALRNQQKHGVSFIEAVSVFYDNNAMLIPDPD
                     HSSREERFLLLGRSNKDNLLVVVHCERNTNIRIISARLATKRESGQYKGVH"
BASE COUNT          771 a          630 c          488 g          800 t
ORIGIN      
        1 ttaaaaacgc tacgaacctc gtagagtctc aacaggtgca tattctatgg atttcagatt
       61 taatgtcaaa taaatttgta ggaaatctgt aaaaaatcgt ttaattggtg aaaaataacg
      121 ctttttgcaa atttttcatc aaatttgacc gcttgcagcc gccttatttg ttgaaatcat
      181 aatcagcaaa tttccgacaa atatcaatta caacttttgt ggctttttcc atcgtatcaa
      241 ccgaaataaa ctcaaatcgt ccgtggaaat tttcgccgcc ggtaaataaa ttcgggcaag
      301 gcaagcccat aaatgaaagg cgtgagccat cagtaccgcc acggatcggt tctaaattcg
      361 gctcaatgcc ttgttcacgc attgcgtttt cggcaatttc aaccaagtag ccgtaatcgt
      421 ccagcacttc acgcatattg cgatattgct cgacaatctc gacttttccg caatgttcgc
      481 cgtaaatctg ttgcatctct gccagcgtat cattcagcat tttgccgaat gcagctaatt
      541 catcacgctc aaagctacgt aaaatatagt gaatttccgc tttatcaatt ccaccctcaa
      601 tgccgtgcaa cataataaag ccttcacgcc cttcgctggt ggcaggggtt aaatggggag
      661 gcagacggtg ttggaactcg caagctcgct ctaaggcgtt gatcatcttg ccctttgccg
      721 tgccggggtg aacgctacgc ccgaagaacg taacggtcgc tgcatcggca ttgaaatttt
      781 catattgcaa ttcgcccaga ggcccgccat caaaggtaaa ggcgacatcg gcaccgaatg
      841 cgtttacatc aaaatgatct gcgcctcgac cgatctcttc atcggtggta aagccgatgc
      901 ggatcttgcc gtgcggaata tgcggattgg cttgtaaata ctcgatagcc gagagaataa
      961 tcgcaatgcc ggatttgtcg tctgcgccaa gcaaagaggt gccgtcagtg gtgactaagg
     1021 tgtcgccaat cagcttgttt aaattcggga aatccgttgg cgaaagataa tcgccactgc
     1081 cgtttagcaa aatattgccg ccttgataag cctcaatcac ctgtggtttc acgttttcac
     1141 cattaaaatc gggcgaagta tcaacgtggg caatcagccc aagcaccggc agggttttgt
     1201 caatattggc aggcaagctg gcgaacagat agccgttggg gtcaagataa atctcgctta
     1261 gccccatcgc ctctacttcc gttttcagca gatgaagcaa atcccactgc tgttgcgagc
     1321 ttggcacagt ttggcttttc ggatctgaag ttgtgtgaat ttgggtgtaa cgtagtaaac
     1381 ggttaagaag ggattgtttc attgtttttc cttactatag tttagtgtaa ccaattctcc
     1441 aatttcagat caggtaccat tttaaatgcc tgatcactag aaactaaaat acactcttca
     1501 gcaagagcgt gactagcaat catttgatcc tgcacgccca ttactttgcc atttttctcc
     1561 atctctgccc gtaactttcc ataaagttca gcacaacgat aattccaatc taaaaccttt
     1621 acactcgata aaaaataatc taaaaattga gaaagctgcc cattatttct tttcgccaca
     1681 ccataaacca attcagcagc agttacagat gaaatacaaa gcctctcagg attaatggac
     1741 ttcaatttcg ccaccacatt tgcatttcca cgaaaaaaat agcttacagt attcgtatct
     1801 aacatataca tttaagctac ctcaaaagga tcccgttgct caaaggattg gtttctctct
     1861 tttgtatcta aaaatgtttc atcacataca acagcaggca atagctcaaa caatcgttgc
     1921 caatgctcgg tatttctcga tctcaatgat aataaaatat cgccattttc ttttttagaa
     1981 acatagactt gctctgcatc aaactcaaat tcaaccggta aacgcactgc ttggttccgc
     2041 ccgttacgga ataatctcgc aattttttcc atcttacttt accctccgat agatagtgta
     2101 tatgccaaag tatatgccta ttttatacaa ctggcaagat aacccattct caaatactca
     2161 ataacatact gatttcaaat cataatatta ccaactaata gtcggtttac gtttctgctc
     2221 aacgcaatct ttcaaataaa gattgatcaa cgtttggtaa ggcaaattca cctcttcggc
     2281 aagttgttta aaatagctga taacatcgtc ttcaatccga atagtaacca cacttttgct
     2341 ttttagccct tttgcgtaag ggtttttcac tgcattagaa aaatcgtatt catctctcat
     2401 ttaatgtact cctttatatt gcccactttc gcgttttgtt gccaaacgtg ctgaaataat
     2461 ccgaatgttg gtatttctct cgcaatgcac aaccacaagt agattatctt tattgctacg
     2521 cccgagtagc aaaaaacgct cttccctaga tgagtgatct ggatccggga ttaacatcgc
     2581 attattatca taaaatacgc ttaccgcctc gataaaacta actccgtgtt tttgttgatt
     2641 acgaagagct ttctcactat cccattcaaa accattaatt tcttccatt
//
LOCUS       DANLZQ010000165         2682 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.166, whole genome shotgun sequence.
ACCESSION   DANLZQ010000165 DANLZQ010000000
VERSION     DANLZQ010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2682)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2682)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2682
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.166"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            139..579
                     /locus_tag="PXE50_002544"
     CDS             139..579
                     /locus_tag="PXE50_002544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HDL5623389.1"
                     /translation="MTACKNGLGFLVLRLFLAYEFFEAGLSKLNGENWFASIQESFPF
                     PFNVLPADLSWAIASGAEILLPILLTLGLFTRFSALGLMILTAVAWYAVHAGNGYNVC
                     NNGYKMALIYLVMLVPLLLQGAGSLSLDFLLQKKSPTKRWLKFL"
     gene            605..892
                     /locus_tag="PXE50_002545"
     CDS             605..892
                     /locus_tag="PXE50_002545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623390.1"
                     /translation="MKKATLMALAGALTMATATVNAETKSVKADACMEVKDGKCVKTK
                     ATEGKCGEGKCGATSSEPKATEGKCGEGKCGATAPKAAEGKCGEGKCGASK"
     gene            993..1916
                     /locus_tag="PXE50_002546"
     CDS             993..1916
                     /locus_tag="PXE50_002546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 family protein"
                     /protein_id="HDL5623391.1"
                     /translation="MLKFTGAGLGYRRDLADGFLSLTDNNIINFMEVAPENWLKMGGQ
                     ARYNFDKVAEKIPVIIHGLSLSLGGQAPLDMTLLKGIKNMQQQYNSFFFSDHLSYCEC
                     EGHLYDLLPMPFTDEAVHHVANRIKQVQDYLGMQISLENTSYYLHSPTSTMNEVEFLN
                     AIAQEADCGIHLDVNNIYVNGVNHGLLDPFVFIDQVDKSRVNYIHIAGHDEDHGAAED
                     VKMTEGESFNMVKGELRHLPTLLVDTHGEAVQKTVWDLLEYTYEHLPHIPPTLLERDF
                     NFPPFQELISEVQHIMSLQKKYAKTRLKNAA"
     gene            1906..2646
                     /locus_tag="PXE50_002547"
     CDS             1906..2646
                     /locus_tag="PXE50_002547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding domain-containing protein"
                     /protein_id="HDL5623392.1"
                     /translation="MPLKLVEEHKPLLKEIQAEFANAIRHNDVKLMSGNISPQRLGVY
                     SRLVRNNTLGFIDRCYVQLPQHLSPEEWVAVKEKFIREGKAHSPFFQDIAGEFLNFCR
                     ENGCMPPHLLELMDFENAQLLAEVSMATVPSEFEWDNDTIMQFSGAAELRQYAVNFIR
                     SEFKQFDFEPTNVLIWRDTEFGIYYNRLEELDFFLLSSLQEGANSLNGLLAELSEFTE
                     QNLELKALLRQLWEKWVEAEVIYPVYPE"
BASE COUNT          803 a          531 c          572 g          776 t
ORIGIN      
        1 ctataaaaat aggttataat ttttcacaca ttttttgtaa taaacgtata cttattctgt
       61 ctaataatca catttttagt taggagcatt tttatgtcat cattttcgtc atcattttca
      121 actcagtcag cttgctcaat gacagcttgt aaaaacggct tgggctttct tgtattacgt
      181 ctatttcttg cttatgaatt ttttgaagca gggttatcaa aactaaacgg tgaaaattgg
      241 tttgcctcaa ttcaagagag cttcccattc ccctttaacg tactaccagc cgatcttagc
      301 tgggctattg ctagcggagc ggaaatctta ctgcctattt tactcacttt gggtctgttc
      361 acccgcttca gtgcgttagg attaatgatc ttaacagcgg tagcgtggta tgctgttcac
      421 gctggcaatg gctacaatgt ctgcaacaat ggctataaaa tggcactcat ttatttagtg
      481 atgttagtac cacttttatt acaaggtgct ggctcgctct ctctcgattt tctgttacag
      541 aaaaaatccc caaccaaacg ctggttgaaa ttcctttaat cccttaattt atggagaatt
      601 tttaatgaaa aaagcaactt taatggcatt agctggtgca ttaactatgg caaccgcgac
      661 tgtaaacgct gaaactaaat cagtgaaagc agatgcttgt atggaagtaa aagatggcaa
      721 atgtgtaaaa accaaagcta cagaaggtaa atgtggcgaa ggcaaatgtg gagcaacctc
      781 ttctgagcca aaagcaaccg aaggtaaatg cggcgaaggg aaatgtggag caacggcacc
      841 aaaagcggca gaaggtaaat gcggtgaagg caagtgtgga gcttctaagt aagtagcgaa
      901 ggtgcgtttt ctaaacgcac ctaacctctt ataaacacaa tctacaagcg gttaaattcc
      961 gctgattttt tgcaaattaa aggaacaaga cgatgttaaa atttactggt gccggtctag
     1021 gctatcgccg tgacctagcg gacggatttt tatctctcac agataacaat ataattaatt
     1081 ttatggaagt agccccagaa aactggctga aaatgggcgg tcaggctcgg tataacttcg
     1141 ataaagtcgc tgaaaaaatc cctgttatta ttcacggttt atccctctct ctcggcgggc
     1201 aagcgccttt agatatgacg ctactaaaag ggatcaagaa tatgcagcag cagtataact
     1261 cctttttctt ctctgatcat ttaagctatt gcgaatgtga agggcattta tatgacctgc
     1321 tgccaatgcc gtttaccgat gaagccgtac atcacgtggc aaatcgcatt aaacaagtgc
     1381 aagattattt aggtatgcaa atttcccttg aaaatacgtc ctactatctg cattcaccaa
     1441 ccagtacgat gaatgaggta gagtttctca atgcaattgc ccaagaagcg gattgtggca
     1501 ttcaccttga tgtgaataat atttatgtta atggtgtcaa tcacggcttg cttgatccat
     1561 ttgtatttat tgatcaagtg gataaatctc gtgtcaatta tattcatatt gcaggccacg
     1621 atgaagatca cggtgcggcg gaagacgtta aaatgaccga gggtgaatca tttaatatgg
     1681 taaaaggcga actacgtcat ctgccaactt tactggtcga tacacacgga gaagctgtac
     1741 aaaaaactgt gtgggattta ctagagtaca cctatgaaca cctaccgcat attccaccaa
     1801 cactgttaga acgggatttc aacttcccac cgtttcaaga actgattagt gaagtacagc
     1861 acattatgag cttacagaaa aaatatgcaa aaacgaggct aaaaaatgcc gcttaaactc
     1921 gttgaagaac acaaaccgtt actcaaagag attcaagccg agtttgcgaa tgcaattcgc
     1981 cataacgatg taaagctgat gagtggtaat atctctccac agcggcttgg cgtctattct
     2041 cgcttggttc gcaataatac tctcggtttt atcgaccgtt gttatgtaca gctccctcaa
     2101 catctaagtc ctgaagaatg ggttgccgtt aaagaaaaat ttatacgaga aggtaaggct
     2161 cattcgccct ttttccaaga tattgctggc gaatttctca atttttgccg agaaaatggc
     2221 tgtatgccac cacacttgct tgagttgatg gactttgaaa atgctcaatt actggctgag
     2281 gtatcaatgg caaccgtacc atcagaattt gaatgggata acgatactat aatgcagttt
     2341 tctggtgcag ctgagctgcg tcaatatgcg gtaaacttta tccgtagcga gttcaaacag
     2401 tttgactttg agccgaccaa cgtactgatt tggcgagata cggaatttgg catctattac
     2461 aaccgcttgg aagagctgga tttcttcctg cttagctcgt tgcaagaggg ggcaaattcc
     2521 ctgaatggct tactagcaga actcagcgag tttaccgagc aaaatctgga gctaaaagcc
     2581 ttgttacgcc aactttggga aaaatgggtt gaagcagagg tgatttatcc tgtctatcct
     2641 gaatgaggat aaggtatgtg atatgtactg acatacatag ta
//
LOCUS       DANLZQ010000166         2673 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.167, whole genome shotgun sequence.
ACCESSION   DANLZQ010000166 DANLZQ010000000
VERSION     DANLZQ010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2673)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2673)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2673
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.167"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(160..996)
                     /locus_tag="PXE50_002548"
     CDS             complement(160..996)
                     /locus_tag="PXE50_002548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623393.1"
                     /translation="MININTIKYSEIFNLRLKRKEKNVPWHIVPKDGTKAFCKQIGAS
                     AVEILREFPTLSDINLNNLPDSFVLKPENGHSDGGVMLLKKIEDNLYSEGFTRKEYNF
                     QQIIEYQKEVCNKFNFSEKGKYLIEEYIPDIYGDLIPRDFKFFIFQGEIAIIMEVNRN
                     KGVIQKHRFYEPDFTTIKNGKVIGLTPEFQLLRLPKPEFADALINLAKRVSIALPTPF
                     ARVDLYWDGKQAKVGEITLTPFYGYPYKWTLSQDIIMGRMWLEALDRMGKKLEDSFDW
                     GN"
     gene            complement(1006..>2673)
                     /locus_tag="PXE50_002549"
     CDS             complement(1006..>2673)
                     /locus_tag="PXE50_002549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDL5623394.1"
                     /translation="DEISHTSFDSEFKLFPLNKANFESQIKGSLSLGLFIESCWKGNF
                     GAWEYAFTSPNLQHQNAQNLLKALDVCKNRNFPIVFWNKEDPMHYEKFLPISSKCDVI
                     FTTDSNKVKDYQRDVPNAKVETLMFAANINICNPANRFRYEAENICFAGSYYGVGHDD
                     RKKQMDALLPTIIKFKGAIYDRMSQVQSADERYSYPKQYRKFIRPAVPFKEIVDIYKQ
                     FKIFLNVNTITDSPTMMSRRVYELLACGTPVISTPSLAIDEQFKGIVQVAKDAKEANK
                     IAKRLLENEWEWLRISHLGYREVMLKHTYEHRAVQIANTLGQDIKPEAPLASIVVASN
                     RPYFIDRIVDNVTNQSYPNIEVIVIAQKYTAEQLDNLKQKLSKSNKLKNVIVVQNDSD
                     DTLGKRLNQGIKLSKGEYVAKFDDDDFYFPNYLQDMLIPFKFGDYGIIGKKEIFIFLE
                     SQNKTFVRYKGQRHLETDFLTGATLVFARDALKKLSFGDLNRGEDSNILEQAKKLGIK
                     MYVTDPFNFVVFRSKELSNHTWQVDDNFFTNKGVFVGEELAKDITKL"
BASE COUNT          874 a          483 c          374 g          942 t
ORIGIN      
        1 taaataagga ttgttcctaa aataatagca agagaagagc ttaatagagt accttttgaa
       61 agaaaaaggt ctccaggcat cacataagcc ccccaaccaa taatagcacc aaaactaatc
      121 gctatagcct gaaagaacga tacctttgtt gatttcacat taatttcccc aatcgaaaga
      181 atcttccaat tttttcccca ttctatctag tgcctccaac cacattcttc ccattatgat
      241 atcctgtgat aatgtccatt tgtatggata accatagaaa ggagttaatg taatttctcc
      301 aactttagct tgctttccat cccaatataa atccactcga gcaaatgggg taggtaatgc
      361 aatagatact cgttttgcta gattaatcaa agcatcggca aattcaggtt taggtaaacg
      421 taataattgg aattctggag ttaagccaat aacttttcca ttcttaatag tggtaaaatc
      481 aggctcgtaa aatcgatgtt tttgaattac acctttatta cgatttactt ccataataat
      541 tgcaatttca ccctggaata taaaaaattt aaaatctctc ggaattaaat caccataaat
      601 atcagggata tattcttcaa taagatattt ccctttttct gaaaaattga atttattaca
      661 aacttccttt tgatattcaa taatttgttg gaagttatat tcttttctag taaacccttc
      721 agagtagagg ttatcctcaa ttttctttaa aagcattacc ccgccatctg aatggccatt
      781 ttcaggtttt aatacaaaac tatctggcag attattcaga tttatgtcag ataaagttgg
      841 aaattccctg agaatttcga cagcactagc accaatttgt ttacaaaatg cctttgttcc
      901 atcttttggt acgatatgcc aaggtacatt tttttctttt ctttttaaac gtaaattaaa
      961 aatttcagag tatttaattg tatttatatt tatcatcttt gtttcctata attttgtaat
     1021 gtctttagct aattcttcgc caacaaaaac acctttatta gtgaagaaat tatcatcaac
     1081 ttgccaagta tgattagaaa gttcttttga acggaaaacg acaaaattga atgggtcggt
     1141 aacatacatt ttgataccta attttttcgc ttgttctaga atatttgaat cttctccacg
     1201 atttaagtct ccaaatgata gtttctttaa ggcatctctt gcgaatacta aagttgctcc
     1261 tgttaagaaa tcagtttcca aatgtcgttg tcctttataa cgaacaaaag ttttattttg
     1321 actttctaaa aaaataaaga tttctttttt acctataatg ccataatcac caaacttaaa
     1381 tggaataagc atatcctgca aataatttgg gaaataaaag tcatcatcat caaattttgc
     1441 tacatattcc cctttggata atttaattcc ttggttcaat cgtttaccca aagtatcatc
     1501 actgtcattt tgaacaacaa tcacattttt cagtttatta ctcttggaga gcttctgttt
     1561 taagttatct aattgttcag cagtgtattt ttgagcaatg acgatcactt caatatttgg
     1621 atagctttga tttgtaacat tatcaacaat tctatctata aaatatggtc gattagatgc
     1681 aacaacaata cttgccaatg gggcttcagg cttaatatcc tgccctaatg tatttgctat
     1741 ttgtacagct ctatgctcat aagtatgttt taacattacc tctcgatagc ctaaatgaga
     1801 aattcttagc cactcccatt cattttctaa caatctctta gcaattttat tggcttcttt
     1861 ggcatcttta gctacttgta caataccttt aaattgttca tctattgcta atgatggtgt
     1921 agaaattaca ggtgtaccgc atgccaataa ttcatacact ctgcgtgaca tcattgtagg
     1981 agaatcggta atagtattaa catttaaaaa tattttaaat tgtttataaa tatcaactat
     2041 ttccttaaat gggactgccg gtctgataaa tttgcggtat tgtttaggat aagaataacg
     2101 ctcatcagct gactgtacct gagacatacg gtcataaata gctcctttaa atttgataat
     2161 agtaggcaaa agagcatcca tttgcttctt acgatcatca tgaccaacac cataataaga
     2221 accagcaaaa cagatatttt cagcttcata tcggaaacgg tttgctggat tacaaatatt
     2281 gatatttgca gcaaacatta atgtttccac tttagcatta ggaacatctc tttgataatc
     2341 tttcactttg ttgctatctg tagtaaaaat cacatcgcat ttagatgaaa ttggtaaaaa
     2401 cttctcataa tgcatcggat cttctttatt ccaaaataca ataggaaaat ttctattttt
     2461 gcaaacatca agagctttta gtagattttg agcattttga tgctgtaaat ttggcgaagt
     2521 aaaggcatac tcccaagcac caaaattccc tttccaacaa ctctcaataa acaaccctaa
     2581 tgataaagaa cctttaattt gactctcaaa atttgcttta tttaacggaa agagtttaaa
     2641 ttcgctatca aaagaggtat gtgagatttc atc
//
LOCUS       DANLZQ010000167         2598 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.168, whole genome shotgun sequence.
ACCESSION   DANLZQ010000167 DANLZQ010000000
VERSION     DANLZQ010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2598)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2598)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2598
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.168"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            7..738
                     /locus_tag="PXE50_002550"
     CDS             7..738
                     /locus_tag="PXE50_002550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011978780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDL5623395.1"
                     /translation="MLRLINNNGVASINFLAEQLKVSHMTIRRDIQKLEEQGKVSLVS
                     GGVQSLERLIMELPHDDKSMLFQEQKSAIGSLASQLIPSNTTIYLDAGTTTLEIAHRI
                     IDRNDLLVVTNDFVIAHYLSNSGKCDLIHIGGSVCKENLSTTGSLAAEFLKNLSIDMA
                     FISTSSWNLKGLTTPNENKIPVKKAILEASKQNILVTDSSKYGKVATFFVCPLTVFDQ
                     IICDKGLFENVRDALKGLSIKLDLG"
     gene            complement(878..2269)
                     /gene="ffh"
                     /locus_tag="PXE50_002551"
     CDS             complement(878..2269)
                     /gene="ffh"
                     /locus_tag="PXE50_002551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HDL5623396.1"
                     /translation="MFENLSDRLSKTLRNITGKGRLTEDNIKDTLREVRMALLEADVA
                     LPVVRDFINKVKERALGVEVNKSLTPGQEFLKIVQSELETAMGEANEELNLAAQPPAV
                     ILMAGLQGAGKTTSVGKLAKFLKERHKKKVLVVSADVYRPAAIKQLQTLAEALKVDFF
                     PTETSQKPVAIAEAALKHAKLNFFDVLIVDTAGRLHVDGEMMEEIQQIHAVLNPIETL
                     FTVDAMTGQDAANTAKAFNEALPLTGVILTKVDGDARGGAALSIRQITGKPIKFLGVG
                     EKTDALEPFHPDRVASRILGMGDVMSLIEDIQRSVDQEKAEKIAAKFKKGDEFTLEDF
                     REQLIEMKKMGGMMSMLDKLPGAKNLPDHVKSQVDDKMFMKMEAIINSMTLKERANPD
                     IIKGSRRRRIALGSGTQVQDVNKLLKQFDDMQRMMKKMRKGGMAKMMRGVKGMMGGGL
                     GGLGGLGSMFGKR"
BASE COUNT          777 a          547 c          506 g          768 t
ORIGIN      
        1 cgagaaatac tacgacttat taataataat ggtgtcgcaa gtattaattt tctggcagaa
       61 cagctaaaag tatcacatat gacaattcgc cgtgatattc aaaagctgga agagcaaggt
      121 aaggtatccc tagtatctgg tggagttcaa tctcttgaac gattaatcat ggaattacca
      181 cacgatgata aatcaatgtt attccaagag cagaaatcag ctataggatc tttagcatca
      241 cagctaattc cctcaaacac aactatttat cttgatgctg gaactactac attagaaata
      301 gctcatcgga taatcgatag aaatgactta ctagttgtaa caaacgattt tgttattgct
      361 cactatctta gtaattcagg aaaatgtgat ttaattcata taggaggaag tgtctgtaaa
      421 gaaaacctat cgacaactgg ttcacttgca gcagaatttc tgaaaaacct atcaatcgat
      481 atggcattta tatctacttc atcctggaat ttaaaaggtc taacaacgcc gaacgaaaat
      541 aaaatccccg ttaaaaaagc aattttagag gcatccaagc aaaacatttt agtgacagac
      601 tcttcaaaat atggaaaagt cgcaactttt tttgtttgcc ctcttactgt atttgaccag
      661 attatttgtg ataaaggatt atttgagaat gtacgagacg cactgaaagg gctaagtatt
      721 aaattagatt taggataatc ttcttaccaa ttttttctga gaacgacaag caatcaaaaa
      781 gtattatttt tgcaaataag atattaatag ggaaagttaa caatcctagc aacggattgt
      841 taactgattt tcggctggta ctaataaaat aggaatatta acgtttacca aacatactgc
      901 ctaagccacc gagaccgcct agaccaccac ccatcatacc tttaacacca cgcatcattt
      961 ttgccattcc gcctttacgc atttttttca tcatacgttg catatcatca aactgcttga
     1021 gcagcttatt tacatcttgc acctgtgtgc cggagccaag tgcgatacgg cggcggcgtg
     1081 agcctttaat aatatccgga tttgcccgct cttttaaggt catagaattg atgatggctt
     1141 ccattttcat gaacatttta tcatcaacct gacttttaac gtggtcaggc aggtttttcg
     1201 cccccggtag tttatcgagc atcgacatca ttccacccat ttttttcatt tcgataagct
     1261 gctcacggaa atcttccaag gtaaattcat cgcctttttt gaatttggcg gcaatttttt
     1321 ccgctttttc ttgatcaacc gagcgttgaa tatcttcaat taaagacatt acatcgccca
     1381 tacctaaaat gcgggaagcc acacggtcag ggtggaacgg ctcaagggca tcagtttttt
     1441 cacccacacc taagaattta atcggtttac cggtgatttg gcgaatagaa agtgccgcac
     1501 cgcctcgggc atcgccatcg actttggtaa gaataacacc ggtaagcggc aacgcttcgt
     1561 taaaggcttt tgcggtgttg gcggcgtctt gaccggtcat cgcatcaacc gtaaatagcg
     1621 tttcaatcgg attcagcaca gcgtggattt gttggatctc ttccatcatt tcgccatcaa
     1681 cgtgtaaacg accggcagta tccacaatca atacatcaaa gaaattaagc ttagcgtgct
     1741 tcaatgccgc ttctgcaatc gctaccggtt tttggctggt ttcggtcggg aagaagtcca
     1801 cttttaacgc ttcagcaagg gtctgtagct gcttgatagc ggcagggcgg taaacatcgg
     1861 cagaaactac caacaccttt ttcttgtggc gttctttcag gaattttgcc aatttgccga
     1921 cagaggtggt tttacccgca ccttgcaaac ctgccattaa aattaccgca ggcggttggg
     1981 ccgcaagatt cagctcctcg ttggcttctc ccattgccgt ttctaattcg ctttgtacga
     2041 tttttaagaa ctcttgcccc ggcgtgaggc ttttgtttac ctcaacccct aacgcacgct
     2101 ctttgacctt gttgatgaaa tcacgcacaa cagggagggc aacatccgcc tccaacaatg
     2161 ccatacgaac ttcacgcagg gtatctttaa tattatcttc cgttaggcga cctttgcccg
     2221 taatgttacg cagcgtttta gacagtctgt cagagaggtt ttcaaacata tcagctttct
     2281 caatttgcaa aattttagga aaaaagtacc gcttgtgagc ggaaagttgc cgccattata
     2341 caaaaaaaag cgttacggtt atagggaaat aaaaaaacgg catagcgatt aaactatgcc
     2401 gtaaaatttg acgatattcg aggaatcatt atttagttat attgtgcgat cataatactc
     2461 cgaattgcgt ataaaagtga agtgatattt tcaaatttat gttagaaatg agaggtaaat
     2521 tacaaaatta aaggggatat tattgtttga aaaaataaga gcgaaaagaa aaccctgatg
     2581 attgctcatc agggcttc
//
LOCUS       DANLZQ010000168         2586 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.169, whole genome shotgun sequence.
ACCESSION   DANLZQ010000168 DANLZQ010000000
VERSION     DANLZQ010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2586)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2586)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2586
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.169"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(<1..410)
                     /locus_tag="PXE50_002552"
     CDS             complement(<1..410)
                     /locus_tag="PXE50_002552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraI domain-containing protein"
                     /protein_id="HDL5623397.1"
                     /translation="MRSMFKKFFGKNKSQSAVKSDTIFSIEQDNEGWLYPEKASQLLN
                     TELRQKYLGLLWQQVSMNRQMFEVLYQQPIERYAEMVQLLPASESHHHSHIGGMLDHG
                     LEVIAFSAKVRQSYILPPNVAPEEQSKQRDAWTAA"
     gene            complement(514..978)
                     /locus_tag="PXE50_002553"
     CDS             complement(514..978)
                     /locus_tag="PXE50_002553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArdC family protein"
                     /protein_id="HDL5623398.1"
                     /translation="MMNTQQPKFDLYQHITDRIIAALEQGTAPWLKPWSHPECNMALP
                     RNAVSNRLYSGINTLLLWIATAEHGYKQCKWITAKKANELGGYIRKGEKATVVMNYRP
                     NEREKLDEEGNIVYDEEGNPEMEQHFFIAKHNLFNLDQCENLPAELYDPVIP"
     gene            1187..1450
                     /locus_tag="PXE50_002554"
     CDS             1187..1450
                     /locus_tag="PXE50_002554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme-like superfamily protein"
                     /protein_id="HDL5623399.1"
                     /translation="MRPVTRNNRGTSFDPRHNKYINTLATALLARWHIEQFSERNIPV
                     NDENLYMAHNIGLDGFHRALLGQSTRKDIENMRKNGMKPWMSI"
     gene            complement(1534..2559)
                     /locus_tag="PXE50_002555"
     CDS             complement(1534..2559)
                     /locus_tag="PXE50_002555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03752 family integrating conjugative element
                     protein"
                     /protein_id="HDL5623400.1"
                     /translation="MTAGDTPHDTLKTLVGALKDTREEARKANERGDRFEQEVLRLQA
                     REAEVDSRIAGEVESRVESRLAAAWDGFNRQIEELKGRVQSGNQQQKEAEAIPVGGAS
                     SGFGTESAGQTGNVDNNGIRWVDPDDMVVTDEQGKPVTGNYSGKTKTGFPSPFKAEGE
                     SSNTGTALNNNAGTENMTGNTQIQQIKRTPYYTIPENSTLMGSTAMTALLGRVPIQGA
                     VTDPFPFKVLIGRENLIANGIDLPDVEGAIVSGTSTGDWTLSCVRSEVTSITFVFADG
                     RISNGRASGESRAVKRNQASNLTPFCLTVSLSGFNDIPHSDGNPGFLTMSAVDYVDVY
                     LMSHLAR"
BASE COUNT          711 a          585 c          498 g          792 t
ORIGIN      
        1 gcagcagtcc aagcatctcg ttgctttgat tgttcttcgg gagctacatt cgggggcaaa
       61 atatagcttt gacgaacttt agctgaaaaa gcaataactt ctaaaccgtg atcaagcatt
      121 ccaccgatat gtgaatgatg gtgtgattca gaagctggta atagttgaac catctcagcg
      181 taacgttcta ttggctgctg ataaagtacc tcaaacattt gacggttcat tgatacctgt
      241 tgccaaagta gcccaagata tttttgtcgt aattctgtat taagtaattg agaggctttt
      301 tccgggtata accacccttc attatcttgc tcaatagaaa aaatagtatc ggatttgacc
      361 gcactttgag atttattttt accaaaaaat tttttgaaca ttgaacgcat tggaagagac
      421 cgaaaatatg aatgctgtat tgaatgaaag ccgtttagcc ctttgccctt ttgggtaaga
      481 cctttcccct tggaaaggtt actcttatcc cccttagggg attacaggat cgtacagttc
      541 cgccggtaaa ttttcacact ggtctaaatt gaacagattg tgcttagcaa tgaaaaagtg
      601 ttgttccatt tccggatttc cttcctcgtc atacacaata tttccctcct catcgagttt
      661 ttctctctca ttaggacggt agttcatcac aacagtagct ttttcccctt tacggatata
      721 tccgccgagt tcattggctt ttttcgccgt aatccactta cactgtttgt agccgtgttc
      781 agcggtagca atccaaagca ataacgtatt gataccggaa tacagacggt tagaaaccgc
      841 attgcgaggt aatgccatat tgcattccgg atggctccac ggttttaacc acggagctgt
      901 accttgttcc aatgcagcaa tgattctatc agtaatatgt tggtataaat caaatttagg
      961 ttgttgagtg ttcatcatgt gtttctccaa agtttgggta aaaaaatggg gaaacacggt
     1021 taccctatgg ggaacttgtt tccccgatgg gtagtttata aaatttcaat ggccacaatt
     1081 tttctagaat catcaaagcc aacagaactg cctatggcgt agtaattacg aatagtctgt
     1141 tcatcggcat tgattagcag atacctatcg aggaagagag attgggatga gaccggtaac
     1201 gagaaataat cgtggaacca gttttgaccc tcgtcacaat aaatacatca atacattggc
     1261 aaccgcatta ttggcacgtt ggcatattga gcaattctct gagcgtaata tcccagtcaa
     1321 tgatgaaaat ctctatatgg ctcacaatat tggcttagat ggtttccatc gagcgttatt
     1381 agggcaatct actcgtaaag acattgagaa tatgcgtaag aatgggatga aaccttggat
     1441 gtccatttag ctctgttttc aaatgaccta atccagtttg ttccggagag agtaccgaaa
     1501 ttttgcactc tttcatccgt ggtgtatcaa acttcaacgt gctaaatgag acattaaata
     1561 tacatcaaca taatctaccg cactcatcgt taagaaaccg ggattcccat cagaatgagg
     1621 aatatcgtta aagcccgata aggagacggt taaacaaaat ggtgttaaat tacttgcttg
     1681 atttcgtttc acagctctgc tttctccact cgctcgccca ttcgaaatac gaccgtctgc
     1741 aaacacaaag gtaatgctcg ttacctcaga acgaacgcaa gatagcgtcc aatctccggt
     1801 tgatgtaccg gatacaatcg ccccctcaac atcaggtaaa tcaatgccat tggcaattaa
     1861 attttctcgc ccgattaata ctttaaacgg aaacggatct gtcacagcac cttgaatagg
     1921 tacacggcct aacaatgccg tcatcgcagt agaacccatt aaagtcgaat tttcgggaat
     1981 agtgtaataa ggtgtacgct ttatttgctg tatctgagta ttaccagtca tattttctgt
     2041 cccagcatta ttatttaatg ctgtcccagt atttgaactt tccccctctg ctttaaaagg
     2101 gcttggaaag ccggtttttg ttttcccgga ataattgcct gtaaccggtt taccttgttc
     2161 atcggttacc accatatcat caggatcgac ccagcgaatg ccattgttat ctacattccc
     2221 tgtttgtcct gctgattcag tcccaaagcc agaagaagcc cctcctacag ggattgcctc
     2281 tgcttctttc tgctgctgat taccactttg aacccgacct ttcagttctt cgatttggcg
     2341 attaaatcca tcccaagcag cagccaaacg gctttctaca cgactttcta cttcacccgc
     2401 aatacgagaa tccacttcgg cttctcttgc ttgtaagcgt aatacctctt gctcaaagcg
     2461 atcaccacgc tcatttgctt tacgagcttc ttcacgagta tcttttaatg ctcctaccaa
     2521 cgtttttaat gtatcgtgag gcgtatctcc tgcagtaata cctaatgtat tcgcctcctc
     2581 atcact
//
LOCUS       DANLZQ010000169         2581 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.170, whole genome shotgun sequence.
ACCESSION   DANLZQ010000169 DANLZQ010000000
VERSION     DANLZQ010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2581)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2581)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2581
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.170"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            45..2393
                     /locus_tag="PXE50_002556"
     CDS             45..2393
                     /locus_tag="PXE50_002556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDL5623401.1"
                     /translation="MLISAQFSPLVWAENNDVAVLDEVSVVGSTPSISQGSEVTLLKV
                     SDKIIAGKEFKKRSATLGNALASELGVHSNPFGGGASKPIIRGQEGARIRILQNGSDV
                     IDMSNLSPDHAVVADSLLADQVEILRGSSTLLYASSSPVGIVNVVDKRIPTAIPEKGY
                     EVELNSRFDTAAKEKVGALGATFGIGNHIAVRVEGLSRHSDNYRVPGINLGERLNYVP
                     DTYNKSKVGTLGLSFVGERGYIGASYSKRRDNYGLPGHNHKFDFCTGHIYGNKRDKYA
                     YTYLYPHLIGEENIGSNPHFHCGTNHAEDGTHSHDNPFGHAHDHTHKGPWVDLESKRI
                     DVKAELRQPFKGVDKIKASYADADYYHDEKDAGVLATRYHKQLKKDQDYGKPVNIFKN
                     RGKNTRLEVYHAPLGGLTGVWGVQYQTQKSSMNAPKDREVKFPLVENTNKQFSLFGVE
                     QYMWDSVAVELAGRMEKQKIEIEYDRNEIKRLQEHYRISGGKQVEPDLSPYDETAYAY
                     SGTLNWFFHPDYQLSFTASHNERLPTPMELYYHGQHIATNSFEYGNKDLKKEQSNNVE
                     LGLGYQAERIGYKVSVYYNHFKNYIYNENLFRENQLFMRRYNQAKARFYGVEAEASYR
                     FNDQYQATIFGDMVRGWLTNLPPLKINSDYSVFKDYLPENVEKGKDYLLYRADQNTPR
                     TPPMRLGFRFNAEFTPNWSGDLELIRTFTQRRTSQLEYITEGNTMLNVGLSYSNKWKE
                     LDYKISLNGTNLLNQPVYIHTSYHQFVPQMGRNFMLGMEMKF"
BASE COUNT          756 a          519 c          625 g          681 t
ORIGIN      
        1 tttttttaag gagaaagatt gtgtttaaga aaacaggatt ggcattgctg atttcggctc
       61 aatttagccc gcttgtttgg gcggaaaata acgatgtagc ggtgttagat gaagtttcgg
      121 tcgttggcag cactccaagt atatcgcagg ggagtgaagt taccttgcta aaagtcagtg
      181 ataaaattat tgcaggtaag gaatttaaaa agcgttcggc aacgctgggt aatgcgttgg
      241 cgtcagaatt aggcgtgcat agtaacccgt ttggtggcgg agcgagtaag ccgattattc
      301 gtgggcagga aggggcgaga attcgcattt tgcaaaacgg ttcagacgtg attgatatgt
      361 cgaacctatc tcctgatcac gccgttgttg ctgattcact gcttgccgat caggtcgaaa
      421 tcttgcgtgg ttccagcacc ttgctttatg ccagcagttc gccggtagga attgtaaatg
      481 tggtggataa acgtattccg accgctattc ctgaaaaggg atatgaggtt gaactcaata
      541 gccgttttga taccgccgcc aaagagaaag tcggcgcatt aggggcaacc tttggcatcg
      601 gtaaccacat tgcggtgcga gtcgaagggc tgagtcgtca tagtgataac taccgtgtgc
      661 cggggatcaa cttaggcgag cgcttaaact atgtgccgga cacttacaat aaatccaaag
      721 tcggcacgtt gggcttatcc tttgtcggtg aacgaggcta tattggtgcc tcatacagca
      781 aacggcggga taattatggc ttgccggggc ataaccataa atttgatttc tgtaccggtc
      841 atatctacgg taataagcgg gataaatacg cttataccta tctctatccg catttgattg
      901 gtgaggaaaa tattgggagc aatccgcact tccactgtgg aaccaaccac gccgaggacg
      961 gcacacacag ccacgataac ccgttcggac acgcccacga tcacactcac aaaggcccgt
     1021 gggtggattt agaatcaaaa cggattgatg tgaaagccga gctacgccag ccgtttaagg
     1081 gcgtagataa aattaaggca agctatgctg atgccgatta ttaccacgat gaaaaagatg
     1141 caggcgtgct tgccacccgt taccataaac agctgaaaaa agatcaggat tacggcaagc
     1201 cggtgaatat tttcaaaaat cggggcaaaa atacccgctt ggaggtctat cacgcaccgc
     1261 taggtggctt aaccggtgta tggggtgttc agtatcaaac gcaaaaaagc agtatgaatg
     1321 cgccgaaaga tcgcgaagtg aaattcccgc tggttgaaaa taccaataaa cagttcagcc
     1381 tgtttggggt tgagcagtat atgtgggata gcgttgctgt tgagcttgcc ggacgaatgg
     1441 aaaagcagaa gattgagatt gagtatgatc gcaatgaaat caaacggtta caagaacact
     1501 accgtatcag tggcggcaaa caggttgagc cagatctttc accctatgat gaaacggctt
     1561 atgcctattc cggcacgctt aactggttct tccaccctga ctatcagctt tcgtttactg
     1621 cctcgcacaa tgaacgcttg ccaacgccaa tggagctgta ttatcacggg cagcatattg
     1681 ctactaattc gtttgaatac ggcaataaag acttgaaaaa agagcagtca aataatgtgg
     1741 agttgggctt gggctatcaa gctgaacgta ttggctataa agtgagtgtt tattacaatc
     1801 actttaaaaa ctacatctac aatgaaaatc ttttccgtga aaatcagcta tttatgcgcc
     1861 gttataatca ggcaaaagcc cgtttttacg gggtagaagc agaggcaagc taccgcttta
     1921 acgaccaata ccaagccacg attttcggcg atatggtacg aggctggcta acaaatttac
     1981 caccattgaa gataaatagc gattatagtg tgttcaaaga ttatctgccg gaaaatgtgg
     2041 aaaaagggaa agattatctt ctatatcggg ctgaccaaaa cacccctcgt acaccgccaa
     2101 tgcgtttagg ttttcgcttt aatgcggaat ttaccccaaa ttggtcgggg gatttagagc
     2161 tgatccgcac ctttacccaa cgccgtacga gccagttgga atatattacc gaaggtaata
     2221 cgatgttgaa tgtcgggttg tcgtatagca ataagtggaa agagctggat tacaaaatca
     2281 gtctaaacgg cacaaactta ctgaatcagc cggtgtatat ccacacttcg tatcaccaat
     2341 ttgtaccaca aatgggacga aattttatgt tgggaatgga gatgaaattt taagttctcg
     2401 acataacaag acaagcggtt attttttctt caaattttgc aaaaaaacgg ctaaaaataa
     2461 ccgcttgttt aaaactcagg tattggtaat ttggataaaa tagtgctgtt tttcctttct
     2521 tgttattttc ggagcttacc aaaatttcct gtttgttgtt aaataagaca attaacttta
     2581 t
//
LOCUS       DANLZQ010000170         2565 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.171, whole genome shotgun sequence.
ACCESSION   DANLZQ010000170 DANLZQ010000000
VERSION     DANLZQ010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2565)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2565)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2565
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.171"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..1642
                     /locus_tag="PXE50_002557"
     CDS             <1..1642
                     /locus_tag="PXE50_002557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HDL5623402.1"
                     /translation="DLNADTSQAFLNELDQTLWTAADKLRKNLDAANYKHIVLGFIFL
                     KYISDSFTDFQAKLKTQLTTPESELYLDPALFDEQEFSQILAEELEQRDYYAAENIFW
                     VPEQARWDNIKSLSKLNLGDELPWGDKFKGVSRLIDDAFEAIERENPKLKGVLQRIAG
                     FGVPDEMLTGLIDLFSRTNFTQPMHNGEPVHLQAKDILGHVYEYFLGQFALAEGKKGG
                     QYFTPKSIVTLIVEMLEPYSGRIYDPAMGSGGFFVQADRFIQAHAGNRNAISVYGQES
                     NSTTRKLAVMNMAIRGIPFDFGDKPEDTLLNPLHIDKKMDVVMANPPFNQKEWWNESL
                     ANDPRWAYGTPPQGNANFAWLQHMIYHLSPKGKMALLLANGSMSSQTSGEGDIRKNIV
                     QADLVEAMIALPNQLFTNTQIPACIWIINKAKARKGEVLFINATQIGYLKDRVLRDFT
                     ADDIAKISDTYHNWQKQNGYENIPAFCYCATLDEIAKNDFVLTAGRYVGAVQEENDGV
                     PFAEKMQELTALLNEQFKQGRELEQQIAENLKGLGYGI"
     gene            1632..>2565
                     /locus_tag="PXE50_002558"
     CDS             1632..>2565
                     /locus_tag="PXE50_002558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL5623403.1"
                     /translation="MAFNQYVFSDIVELISEKIKIKDLKKENYISTDNMLPNFGGITL
                     AENLPNSASCNRFAKKDILFSNIRTYFKKVWLAEFSGGCSPDVLVMRSKNTDILLNEY
                     LFLLIRSDDFINFTVISANGAKMPRGDKNAMKGFIFNIPSIEYQKKCIANYFAFDQKI
                     QLNTQTNQTLEAIAQAIFKSWFVDFDPVRAKAAALSEGKSEHEANLAAMSVICGKDTS
                     ELNDTEYKALWQIAEAFPSEFGDEGLPIGWKFNQADNLFDVGIGKTPPRKESEWFSDN
                     ANDTEWISIKDMGNQGLFITESSEYLKAEAVDTFN"
BASE COUNT          812 a          596 c          528 g          629 t
ORIGIN      
        1 tgatctcaac gctgacacaa gtcaagcctt tttaaacgaa ctcgaccaaa ccctctggac
       61 tgccgccgac aaactgcgta aaaacctcga tgccgccaac tacaaacaca tcgttcttgg
      121 ctttatcttc ctaaaataca tctccgacag ctttaccgat ttccaagcca agctaaaaac
      181 ccagcttacc acccccgaaa gcgaactcta tcttgaccct gcactatttg acgaacaaga
      241 atttagccaa attcttgccg aagagttgga acagagagat tactacgccg ctgaaaacat
      301 cttttgggtg ccggagcaag cccgctggga caacatcaaa tcattaagca aactcaatct
      361 tggcgatgaa ttgccttggg gagacaaatt taaaggtgtc agccgcttga ttgatgatgc
      421 ctttgaagcc atcgaacggg aaaaccccaa actcaaaggc gtactccaac gcattgccgg
      481 ctttggcgtg cctgatgaaa tgctcacagg cttaattgac ctgttctcac gcaccaattt
      541 cacccagcct atgcacaatg gcgaacctgt gcatctgcaa gccaaagaca ttttagggca
      601 cgtctatgaa tactttcttg ggcaatttgc ccttgccgaa ggcaaaaaag gcggtcaata
      661 cttcacgcca aaatccatcg ttaccctgat tgttgaaatg ctcgaaccct attcagggcg
      721 gatttacgac ccagctatgg gcagcggcgg cttttttgtg caagctgacc gctttattca
      781 ggctcacgca ggcaaccgca acgccatttc cgtttatggg caagaatcca actccaccac
      841 tcgcaaactg gcggtgatga atatggcgat tcgtggtatt ccctttgact ttggcgacaa
      901 gcccgaagat accctactaa accctttgca catcgacaaa aaaatggatg ttgtgatggc
      961 aaatccgccc tttaaccaaa aagagtggtg gaatgaaagc ctagcaaacg atccacgctg
     1021 ggcatacggc acaccgccgc aaggcaacgc caactttgcg tggttgcaac atatgattta
     1081 ccacctctcc cccaaaggca aaatggcact cctgctcgcc aacggctcaa tgagcagcca
     1141 aacttcaggc gaaggcgaca ttcgcaaaaa catcgtgcaa gctgaccttg tcgaagcgat
     1201 gattgccctg cccaatcagc tattcaccaa cacccaaatc cctgcctgca tttggattat
     1261 caataaagcc aaagccagaa aaggtgaagt gctgtttatc aacgccaccc aaataggcta
     1321 cctgaaggac cgcgtcttgc gtgattttac cgctgatgac atcgccaaaa tcagcgacac
     1381 ctaccacaac tggcaaaaac agaacggcta cgaaaatatc cctgcgtttt gttattgtgc
     1441 cacgctggac gaaatcgcca aaaacgattt tgtgctgacc gcagggcgat atgtcggtgc
     1501 ggtacaagaa gaaaatgacg gcgtgccgtt tgcagaaaaa atgcaggaat tgaccgcttt
     1561 attgaatgaa caatttaaac aagggcggga attggaacag caaatcgcag agaatttaaa
     1621 ggggttggga tatggcattt aatcagtatg tattttcaga tattgttgaa ttaatatccg
     1681 aaaaaataaa aatcaaagac ttaaaaaaag aaaactatat ttcgacagat aatatgctgc
     1741 ctaattttgg tggaataaca cttgctgaaa accttccaaa ttcagcttct tgcaataggt
     1801 ttgccaaaaa agacattttg ttttccaata taagaaccta ctttaaaaaa gtttggcttg
     1861 ctgaattttc aggtggttgt tctcctgatg ttctggtaat gcgcagtaaa aacacagata
     1921 ttttattaaa tgagtattta tttttactta tccgttctga tgattttatt aactttacag
     1981 ttatatcagc aaatggagca aaaatgccac gaggggataa aaatgcaatg aaaggtttta
     2041 ttttcaatat cccaagtatt gaatatcaaa aaaaatgtat tgctaattat tttgcctttg
     2101 accaaaaaat ccaactcaac acccaaacca accaaaccct agaagccatt gcacaggcaa
     2161 tcttcaaaag ctggtttgtg gattttgacc ctgtgcgcgc caaagccgcc gccctaagcg
     2221 aaggcaaaag cgaacacgaa gccaaccttg cggcaatgtc ggtgatttgt ggtaaagaca
     2281 ccagcgagtt aaacgacacc gaatacaaag cgctttggca aatcgccgaa gccttcccaa
     2341 gtgagtttgg agatgaaggg ttacctattg gctggaaatt caatcaagca gacaatttat
     2401 ttgatgttgg tattgggaaa accccaccaa gaaaagagag tgaatggttt tctgataatg
     2461 caaatgatac agaatggatt tctattaaag atatgggaaa tcagggatta tttatcacag
     2521 aaagtagcga atatctaaaa gctgaagccg tagatacatt taata
//
LOCUS       DANLZQ010000171         2542 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.172, whole genome shotgun sequence.
ACCESSION   DANLZQ010000171 DANLZQ010000000
VERSION     DANLZQ010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2542)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2542)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2542
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.172"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            165..440
                     /locus_tag="PXE50_002559"
     CDS             165..440
                     /locus_tag="PXE50_002559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5623404.1"
                     /translation="MAKATVARRIKNAINGNFGDHKSLAGTGGLYEMRIATGAGYRIY
                     YAQQGNVIYILLHGGDKSTQQADIEKAKALWAELKTTGESNGNNTNQ"
     gene            418..741
                     /locus_tag="PXE50_002560"
     CDS             418..741
                     /locus_tag="PXE50_002560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative addiction module antidote protein"
                     /protein_id="HDL5623405.1"
                     /translation="METIQINEQAAEKHGLRPFDVAEFLTDEATIQAYLAEVLKEGDQ
                     DEFLEALNNVARARGMAELAKQTGLGRESLYKTLAKGSKPRFDTIQKILGAFNLVLIP
                     QVKNG"
     gene            1309..1557
                     /locus_tag="PXE50_002561"
     CDS             1309..1557
                     /locus_tag="PXE50_002561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4102 domain-containing protein"
                     /protein_id="HDL5623406.1"
                     /translation="MTATKKTLSDTLLKNLKYSPNAKPIADSNGLFILAQKKAKVWIY
                     SYISPKTGKRSTKNRIGSYPQMSLVEQSPQVFEQIARL"
     gene            1609..2196
                     /locus_tag="PXE50_002562"
     CDS             1609..2196
                     /locus_tag="PXE50_002562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SocA family protein"
                     /protein_id="HDL5623407.1"
                     /translation="MFDELKIAQATAYLLHKAGGTMEHIKVMKLLYLADRLSWQRYGY
                     SISNDEYYSLPYGPVLSNTLNLMRGEEASLYQKTSIWGEWIADKEDHKISLKKSVNTE
                     DEYFFDCLSESDTEILEEVFATFGNYKPFALVEYTHNPKYIPEWEDPQGRSKPISLST
                     LLTKLGKTPSEIESILEQQAEKGTMDNLFKGLGNA"
     gene            2189..2542
                     /locus_tag="PXE50_002563"
                     /pseudo
     CDS             2189..2542
                     /locus_tag="PXE50_002563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252950.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="terminase"
BASE COUNT          919 a          478 c          491 g          654 t
ORIGIN      
        1 ttgaaactgc tctcttttca aaatttaacc acttgattat ttgtatctta atggatacac
       61 taagcaataa atagaataag aggctggcaa tgacagagca aaccactaat caaatcatca
      121 ttaccgataa tttttcaaaa tagcttgaga atttaaagaa ccctatcgca aaagcaacgg
      181 tagcaaggcg gataaaaaat gcgattaatg gcaactttgg cgatcataaa tctttagccg
      241 gtacaggcgg actttatgaa atgcggatag caacaggagc cggatataga atttattacg
      301 cacaacaagg aaatgtaatt tatatcttgt tacacggcgg cgataaatca acacagcaag
      361 ccgatataga gaaagcgaaa gcattatggg ctgaattaaa aactacaggg gaaagcaatg
      421 gaaacaatac aaatcaatga acaggcagca gaaaagcacg gtttacgccc ttttgacgtg
      481 gcggagtttt taaccgatga ggcaactatt caagcctatt tagcggaagt gttaaaagag
      541 ggcgaccaag acgaattttt agaagccttg aacaatgtgg caagggcaag gggaatggcg
      601 gagcttgcca agcaaacagg gctagggaga gagagcctat ataaaaccct agccaaaggc
      661 agcaaaccac gctttgacac tattcaaaaa attctagggg cattcaattt agtgcttatt
      721 ccacaagtca aaaatggcta aaacttatca cttgctacct gccaaaacct cacattcaaa
      781 tagccgttga ttgatattaa cggctttttt attgcttaat tctgtaccaa ttacgcaccg
      841 attgcggatc aatacggggc aagttttcgc aaaaccttaa tgaaatatga ccgcttgtga
      901 ttttgtacaa aacgacacaa accaatgtat aaaatcaaaa cttgccacaa atggcggaat
      961 gatattaaat gccccacaaa ctagcagtat ttcttaatga cttttcattt taagggtaca
     1021 tttaagggta tgtttaacaa gtcttaaatg cacttctcaa taataacaag cctcatagca
     1081 tacaattcaa actcggctgg ggaccattta agcgttgcat attgtctttc actgtctcaa
     1141 atttactata aaatcaagaa cttagattat tttatagtct cttattgtct tctttagttg
     1201 cattgtatct tagcgtttat gatccctaaa atgatcccta ttttgaaaac gggaaaattt
     1261 agggatcata aacttcgata aacccttata tatcaaggat tagaagaaat gactgcaact
     1321 aaaaaaacac tttcagacac attactaaaa aatcttaaat attccccaaa tgcgaagcct
     1381 atcgcagaca gtaacgggct atttattctt gcacagaaaa aagcgaaagt atggatttat
     1441 agctatatca gccccaaaac aggcaagcga agcacaaaaa atagaatcgg tagctatccg
     1501 caaatgagct tagtggaaca atccccacag gtatttgaac aaatcgcacg tctttaaaat
     1561 attaaattaa gagaaagcac tatttgcgat gtagcaggag ataaaacaat gtttgatgaa
     1621 ttaaaaatag cccaagcgac cgcctatttg ctacataagg caggcggaac aatggagcat
     1681 attaaggtaa tgaaattgct ttatcttgcg gatcgcttat cgtggcaaag atacggctat
     1741 tctatttcta atgatgaata ttattcattg ccttatggac cggtattaag caacacactc
     1801 aacctaatgc gaggagaaga agcgagctta taccaaaaaa ccagtatttg gggcgagtgg
     1861 atagcagata aggaagatca caaaatcagc cttaaaaaat ccgtaaatac cgaagatgaa
     1921 tacttctttg attgcctttc agagagcgac accgaaattt tagaagaggt atttgcgacc
     1981 tttggaaatt ataagccatt cgccctagtg gaatataccc ataaccctaa atacattccc
     2041 gaatgggaag acccacaagg cagaagcaag ccgatttctt taagcacgct tcttactaag
     2101 ctagggaaaa cgccaagcga gatcgaaagc attttagagc aacaggcgga aaaagggaca
     2161 atggataacc ttttcaaggg cttaggcaat gcttgaaatc aaaagacaag taacgattct
     2221 tagaccgacc aactacggca aggaagagaa ccactacaag catttatata ttctgcttac
     2281 cgatccgtgc tttgatggtg aaaccggtaa aggagatatg attttaagtg taaactgctc
     2341 aagcattaaa gacgggaaag cacttgatga aacttgtatt ttaaaggcag gaacacacga
     2401 atttatcaca cgggacagct tcattttcta ccgccatata aaaattgatt cgttagatga
     2461 gattaaggca aatatagaag ccggttattt tattcaaaag ccctaattaa tgatgaagcc
     2521 tatcaacaaa tactaaaagg cg
//
LOCUS       DANLZQ010000172         2430 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.173, whole genome shotgun sequence.
ACCESSION   DANLZQ010000172 DANLZQ010000000
VERSION     DANLZQ010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2430)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2430)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2430
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.173"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(116..191)
                     /locus_tag="PXE50_002564"
     tRNA            complement(116..191)
                     /locus_tag="PXE50_002564"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(156..158),aa:Thr,seq:ggt)
     gene            complement(195..269)
                     /locus_tag="PXE50_002565"
     tRNA            complement(195..269)
                     /locus_tag="PXE50_002565"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(234..236),aa:Gly,seq:tcc)
     gene            complement(313..397)
                     /locus_tag="PXE50_002566"
     tRNA            complement(313..397)
                     /locus_tag="PXE50_002566"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(361..363),aa:Tyr,seq:gta)
     gene            complement(432..507)
                     /locus_tag="PXE50_002567"
     tRNA            complement(432..507)
                     /locus_tag="PXE50_002567"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(472..474),aa:Thr,seq:tgt)
     gene            754..1704
                     /gene="coaA"
                     /locus_tag="PXE50_002568"
     CDS             754..1704
                     /gene="coaA"
                     /locus_tag="PXE50_002568"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I pantothenate kinase"
                     /protein_id="HDL5623408.1"
                     /translation="MSLEKTSKITPFLTFDRQQWADLRKSVPLKLTEQDLKPLLGFNE
                     DLSLEEVRTIYLPLARLIQYYIEENLKRQTVLHRFLGIEPPKVPYIISIAGSVSVGKS
                     TSARILQALLSHYPKERKVDLITTDGFLYPLATLTEKNLLKKKGFPESYDIHSLIRFV
                     SDIKSGKRNVKAPIYSHLTYDIIPNQFNTVDQPDIVILEGLNVLQSGMNYPSSPHNVF
                     VSDFVDFSIYVDAEESLLKKWYINRFLKFRRSAFADPNSYFHHYASLSEQEAIETAST
                     IWEEINGLNLRQNILPSRERANLILIKGQDHAIETVKLRK"
     gene            1857..2396
                     /locus_tag="PXE50_002569"
     CDS             1857..2396
                     /locus_tag="PXE50_002569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbE family thiol:disulfide interchange protein"
                     /protein_id="HDL5623409.1"
                     /translation="MNKKFLLPLILFLALSVAFLVQLARNSQGDDPKKLESALIGKTV
                     PSFNLESVLDEKQTIDQNIVKTGKPRLLNVWATWCPTCYAEHEYLTILAKQGVEIVGI
                     DYKDERPKAIKFLANYGNPYKAIIFDPKGSLGLDLGVYGAPETFIIDGNGVIQYRHAG
                     DVNDQVWNQVLKPIYDGLK"
BASE COUNT          758 a          509 c          465 g          698 t
ORIGIN      
        1 tttctaaaag cctcttaaac aaaaacggtt acaatggaac aaaagaaccc attaaccata
       61 atgtagaaat taataccaat aaaaatttgc gtgagaaaga tagaattcag agaagtggtg
      121 ctgataggcg gatttgaacc gccgacctca cccttaccaa gggtgcgctc taccaactga
      181 gctatatcag cgcttggagc gggcagcggg aatcgaaccc gcatcattag cttggaaggc
      241 taaggtaata gccattatac gatgcccgct gttctaaatt cgtctgacct acgcgattca
      301 aaatatcaga gatggtggag ggagaaggat tcgaaccttc gaaggctgag ccaacagatt
      361 tacagtctgc cccctttggc cgctcgggaa cccctccacg ataattgaat acttatttac
      421 gcctgagtta atggtgccga ctaccggaat cgaactggtg acctactgat tacaagtcag
      481 ttgctctacc tactgagcta agtcggcgtt gctgtgtcgt aagcaagtga tgtgcattat
      541 agggaaattt taacagcgtg caagtgtttt ttaaaaaaat attaaaaaaa gcgttctttc
      601 gatttttaaa tatacaaaat gactattttt tgtaaaatac aacggatttt ctctgcataa
      661 ctacggcaaa ataagtgcat atattgtata gttacgccct taatttggta tttaattacc
      721 ttaatattcc agcaaaaaat tgagattttg gctatgagcc ttgaaaaaac cagcaaaatt
      781 actccttttc tcacttttga tcgccaacaa tgggctgatt tacgcaaatc cgttccattg
      841 aagctgaccg agcaagacct aaaaccgctt ttaggcttta atgaagatct ttcattagaa
      901 gaagtacgca ctatttattt accgcttgcc cgtttaattc aatactatat agaagaaaac
      961 ttaaaacgcc agacagtctt acatcgcttt ctcggcattg aaccgccaaa agtcccttac
     1021 attattagta ttgccggcag cgtatcggtt gggaaaagta cctctgcccg tattctgcaa
     1081 gctctgctct cccattaccc taaagagcga aaagtggatt taattaccac cgacggtttt
     1141 ttatatccac ttgcaacgct aaccgaaaag aacttactca agaaaaaagg ctttccggaa
     1201 tcttatgata ttcacagcct gattcgcttt gtatctgata ttaaatccgg caaacgcaat
     1261 gtgaaagctc cgatttattc acatttgacc tacgatatta tcccaaatca atttaatacg
     1321 gtggatcaac ccgatattgt gattttagaa gggctaaacg tgttacaaag tggaatgaac
     1381 tacccgtcca gcccacataa tgtatttgta tcggactttg tggatttttc tatttatgtg
     1441 gatgccgaag aaagtttgct gaaaaaatgg tatatcaacc gtttcttgaa attccgccgc
     1501 agtgcctttg ccgacccaaa ctcctatttc caccattatg cgagtttgtc cgagcaagaa
     1561 gcgattgaaa ccgcctcaac gatttgggaa gagatcaacg gcttaaattt acgccaaaat
     1621 attctcccaa gccgagagcg tgccaacctc attttaatca aagggcaaga ccacgccatt
     1681 gaaacggtaa aattacgcaa ataatatttt gcaaataatt gggctttttc gaccgcttgt
     1741 aataccttaa aatccgttga ataccactca acggattttt tatttaaatc aatgcttatt
     1801 caactatttt ttggtaagct aacgactttg agagtgattg atattaggca tatacaatga
     1861 acaaaaaatt tctacttcct ttaattctct ttttggcgtt atctgtggca tttttggttc
     1921 aactcgctcg caactcgcaa ggcgatgatc cgaaaaaatt agaatcagcc ttaattggca
     1981 aaacagttcc gagctttaat ttagaatcgg tattagatga aaaacagaca atcgaccaaa
     2041 atatcgtcaa aaccggcaaa cctcgcctgc ttaacgtgtg ggcaacttgg tgtccgactt
     2101 gttatgccga acacgaatac ttaaccattt tggcaaaaca aggggtggaa attgtcggta
     2161 ttgattataa agacgaacgc ccaaaagcga ttaaattctt agccaattac ggcaaccctt
     2221 ataaagcgat tatttttgac ccgaaaggct cactcggttt agatttaggt gtttatggtg
     2281 cacccgaaac ctttattatt gacggcaacg gcgtgattca ataccgccac gccggcgatg
     2341 taaacgacca agtgtggaac caagtgctta aaccgattta tgatggatta aagtaaatgt
     2401 ttgtatttcc tgctgacatt aagaaatcta
//
LOCUS       DANLZQ010000173         2363 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.174, whole genome shotgun sequence.
ACCESSION   DANLZQ010000173 DANLZQ010000000
VERSION     DANLZQ010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2363)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2363)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2363
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.174"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(<1..246)
                     /gene="raiA"
                     /locus_tag="PXE50_002570"
     CDS             complement(<1..246)
                     /gene="raiA"
                     /locus_tag="PXE50_002570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HDL5623410.1"
                     /translation="MSLNISSKQMDITPAIRTHIEERLAKLEKYHTQLINPHFMLIKQ
                     PNSFQVEATIGTPLGDLVAKAEHEDLYTAIFDVKKKLE"
     gene            426..1367
                     /locus_tag="PXE50_002571"
     CDS             426..1367
                     /locus_tag="PXE50_002571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LpxL/LpxP family Kdo(2)-lipid IV(A)
                     lauroyl/palmitoleoyl acyltransferasee"
                     /protein_id="HDL5623411.1"
                     /translation="MSEKKQLPPFQTQFLHPKYWGLWLGLGVFKLILCLPYPILVKIG
                     LGLGKLFTKLGFGKRRMRIARRNLELCFPHYSAEKVEELVEENMKSVGMAIIETGMAW
                     FWSDKRILKWSKIEGLEHLTQRDQERGILLVGVHFLTLELGARIIGLHHQGVGVYRPN
                     DNPLLDWIQFRGRVRSNKAMLDRKDVRGMIRALKNGEMIWYAPDHDYGRRNSVFVPFF
                     AVEETCTTAGSYMLLRSAPKSLVIPFSPIRNLDYSGYTVKVSPAVDFSQCQNEVETAI
                     LMNRVVEREIMAALTQYMWLHRRFKTRPNEGDQSLYD"
     gene            1463..2350
                     /gene="dapA"
                     /locus_tag="PXE50_002572"
     CDS             1463..2350
                     /gene="dapA"
                     /locus_tag="PXE50_002572"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HDL5623412.1"
                     /translation="MATPLFHGSIVALVTPMTHGEVDYQDLKKLVEYHIQAGSHAIVS
                     VGTTGESTTLSIDENVKVIKKTVEFADGRIPIIAGTGSNATSEAITMTKLLANSGVAG
                     CLSVVPYYNKPTQEGMYLHYKAIAESTDLPQILYNVPGRTGSDLKPETIGRLAKIENI
                     VAVKEATGDLSRLPLIKQLAGEDFIFLSGDDATGFESMKLGGQGVISVTNNVAAADMA
                     KMCELALAGQFTEAEEINNRLMALHHDLFVESNPIPVKWAAYKLGLISEPNLRLPLTT
                     LSESAQPVVLKALQQAGLI"
BASE COUNT          722 a          369 c          507 g          765 t
ORIGIN      
        1 ttctaatttc ttcttaacat caaaaattgc agtatataaa tcttcatgtt cagctttagc
       61 gactaaatca cctaaagggg tgccaattgt tgcttcaact tggaatgagt taggttgttt
      121 tatcagcata aaatgtgggt ttatcaattg ggtgtggtat ttttctaact tagctaaacg
      181 ctcctcaata tgagtacgga ttgcaggggt aatgtccatt tgtttgcttg aaatatttaa
      241 tgacataaca ttttcctctt gtttagttaa ggcttttgcc gttgatattc taataaccaa
      301 aatatgctca tcactccaaa aattcaagtg aaaaatgaaa taagtttcca aaaatttgat
      361 ctacttaaca cttttagcag tttttagcta taatgtaatc ataatctagt atgtgagaat
      421 aattaatgag tgagaaaaaa cagttacctc cattccagac acaattttta caccctaaat
      481 attggggatt gtggctcggt ttaggtgttt ttaagttaat tttatgtttg ccttatccta
      541 ttttagtaaa aattggtctg ggactaggta aattgtttac taaattgggt tttggtaaac
      601 gtcgtatgcg tattgctcgc cgtaatttag agctctgttt tccccattac tctgctgaga
      661 aagtagagga attagtcgaa gaaaatatga aatcggttgg aatggcgatt attgaaactg
      721 gtatggcttg gttttggtcg gataaacgta ttcttaaatg gtctaaaatc gaagggctag
      781 agcatttaac acagcgtgat caggaaaggg gtattttact tgtaggggtg cattttctga
      841 ctttagaact cggtgcaaga attattgggc tacatcatca aggagtaggg gtttatcgac
      901 cgaatgataa tccattatta gattggatac agtttcgagg acgtgttcgc tcaaataaag
      961 cgatgttaga tcgtaaagat gtgcgtggaa tgattcgagc tttaaaaaat ggcgagatga
     1021 tatggtacgc gcctgatcac gattatggaa gacgaaatag cgtttttgta ccattttttg
     1081 cagtggagga aacttgtact actgcgggta gttatatgtt acttcgttct gccccaaaga
     1141 gtttagtgat cccgtttagc ccgattcgaa atttggacta ttcaggctac acagtaaaag
     1201 tcagtcctgc cgttgatttt agtcaatgtc aaaatgaagt tgaaacggct attttaatga
     1261 atcgggtggt agaacgtgaa attatggctg cgctaactca atatatgtgg ctacatcgcc
     1321 gttttaaaac tcgcccaaat gaaggtgatc aaagcctata tgattaattt taaataattt
     1381 caaaaaagtg cttgcatatt taagctgaat tttgcaatct agcaatgtta tcaagcataa
     1441 taaaaaaata caggagatga ttatggcgac ccctttattt cacggtagta tcgtagcatt
     1501 agttacacca atgactcatg gtgaggtaga ttatcaggat ttaaaaaaat tagttgagta
     1561 tcatattcaa gcaggttctc acgctattgt atctgttggt acaacaggtg aatctaccac
     1621 attaagcatt gatgaaaatg ttaaggtgat taagaaaacg gttgaatttg ctgatggacg
     1681 tattccaatt attgcaggaa ctggttctaa tgcgaccagt gaagctatca ctatgactaa
     1741 attattagca aacagtggtg tagctggttg tttaagtgta gtgccttatt acaacaagcc
     1801 aacgcaagag gggatgtact tacactacaa agcgattgca gaaagtacag atttaccaca
     1861 aattctgtat aatgtgccgg ggcgaacagg gagtgattta aaacctgaaa caatcggtcg
     1921 cttagcgaaa attgagaata ttgttgctgt gaaagaagca acgggtgatt taagccgctt
     1981 acctttaatt aagcaattag ccggtgaaga ttttattttc ttaagtggtg atgatgctac
     2041 cggttttgag tctatgaaat taggtggtca aggggtgatc tcggtcacca ataatgttgc
     2101 tgctgctgat atggcaaaaa tgtgtgagtt agctcttgcc ggtcaattta ctgaagcaga
     2161 agaaattaat aaccgcttaa tggcgttaca ccatgactta tttgtcgaat ctaacccgat
     2221 tccggtgaaa tgggctgctt ataaattagg tttaattagt gagcctaatt tacgtttacc
     2281 gcttaccaca ctgtctgaat cagcacagcc tgtagtgtta aaagcattac aacaagcggg
     2341 cttaatttag ttattttttg caa
//
LOCUS       DANLZQ010000174         2335 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.175, whole genome shotgun sequence.
ACCESSION   DANLZQ010000174 DANLZQ010000000
VERSION     DANLZQ010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2335)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2335)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2335
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.175"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(88..717)
                     /locus_tag="PXE50_002573"
     CDS             complement(88..717)
                     /locus_tag="PXE50_002573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid transporter"
                     /protein_id="HDL5623413.1"
                     /translation="MDIFIQGFIVCFGLIVSIGAQNAFLLKQGILKQHIFWIALLCFL
                     GDVFLMTIGVLGLGTLIAELPVVSFIISLLGAIFLLSYGSRSFISVFKSGEYLVASGE
                     NATSLKKALLITFAITFLNPHVYIDTVVIVGSIGGKLDFNGKIYFLAGALLCSFIWFF
                     GIGYGASLLSPYFAKRRTWQILDAVTGLIMYFIAFSLLIYTYQLALQIF"
     gene            821..1468
                     /gene="udk"
                     /locus_tag="PXE50_002574"
     CDS             821..1468
                     /gene="udk"
                     /locus_tag="PXE50_002574"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HDL5623414.1"
                     /translation="MTDTSQTSSCVVIAIAGASASGKSLIASTIYKELKNELGTDNIG
                     IISEDAYYRDQSHLTMEERIKTNYDHPNSMDHHLLVEHLRQLKQGNAIEIPEYDYTEH
                     NRKTTTKHFEPKKIIILEGILLLTDENIRNEINVSIFVDAPLDICFIRRLQRDMVERG
                     RSMESVISQYRKTVRPMFLQFIEPSKQYADIIVPKGGKNRIAIDILKAQIKQLLK"
     gene            1483..2064
                     /gene="dcd"
                     /locus_tag="PXE50_002575"
     CDS             1483..2064
                     /gene="dcd"
                     /locus_tag="PXE50_002575"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HDL5623415.1"
                     /translation="MRLCDTDIKRYLDEGIIAITPRPSDDKISGATADVRLGNSFRVF
                     REHKTPYIDLSGPREEVAAQLNKVMSDEIIIGDDEAFFLHPGDLALATTLESVSLPAN
                     IVGWLDGRSSLARLGLMVHVTAHRIDPGWEGKIVLEFFNAGKLPLALRPNMAIGALSF
                     EILSGDAAKPYNARKDAKYKNQQSAISSRINQD"
     gene            2142..2297
                     /locus_tag="PXE50_002576"
     CDS             2142..2297
                     /locus_tag="PXE50_002576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009041538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1328 domain-containing protein"
                     /protein_id="HDL5623416.1"
                     /translation="MLHYAVVFFVIAIIAALLGFGGIAGSATEIAKILFFVFLILTVI
                     SFFFKKK"
BASE COUNT          802 a          439 c          395 g          699 t
ORIGIN      
        1 caaaaataag cacattttat agtgcgaaca ttgctactaa tatagcaaaa aagcccgtca
       61 ttcatcaatg aaaaaattta aactccacta gaaaatttgc agagcaagtt gataagtata
      121 aatcagtaaa ctaaaagcga taaagtacat aattagcccg gtaacagcat ctaaaatttg
      181 ccaagttctt cgctttgcaa aataagggga aagtaagctt gctccataac ctatgccaaa
      241 aaaccaaata aatgagcaaa gtaatgcacc tgctaaaaag tatattttac cgttaaaatc
      301 taatttccca ccgatactgc ctacaatcac aaccgtatca atataaacgt gaggatttaa
      361 gaatgtaatc gcaaaggtaa tcagtaaagc cttttttaag ctcgttgcat tctctccact
      421 tgccacaagg tattcaccac ttttaaatac gctgataaat gaacggctac cgtagcttaa
      481 tagaaaaatg gcccctaaaa gcgaaataat gaaacttaca acaggcaatt ccgcaattaa
      541 cgtgcctaag cctagcacac ctatcgtcat taaaaataca tcacctaaaa aacagagcaa
      601 tgcaatccaa aatatgtgtt gttttaaaat cccttgcttt aataaaaagg cattttgtgc
      661 gccaatagag acaattaagc caaaacacac tataaatcct tgaatgaaaa tatccatttt
      721 ttctccaaaa tcgcataaca agcggtcaat tatacaaaaa attttgcaaa acttcggtat
      781 aatttatcga atactctttt gactgaatag gaaatttttt atgactgata ctagccagac
      841 ttcatcttgc gttgtcattg cgattgccgg cgcatctgcc tcaggtaaga gcctgattgc
      901 ctcaaccatc tataaagaac tcaaaaatga attgggaaca gataatatcg gtattatttc
      961 cgaagatgct tattatagag atcaatctca tctaacaatg gaagaacgga ttaaaaccaa
     1021 ttacgatcac cctaattcaa tggatcatca tttattggtt gaacatttac gccaattaaa
     1081 acaaggtaat gcgattgaaa ttccagaata tgactatacc gaacataatc gtaaaacgac
     1141 cacgaagcac tttgaaccaa agaaaatcat tattttagaa ggtattttat tgctgacaga
     1201 tgagaatatt cgcaatgaaa ttaatgtttc tattttcgta gatgctcctc tggacatctg
     1261 ctttatccgc cgcttacaac gtgatatggt ggaacgtgga cgttcgatgg aatcagtgat
     1321 tagtcaatat cgcaaaaccg ttcgcccaat gttcttacaa tttatcgaac cctctaaaca
     1381 atatgctgat attattgtgc caaaaggtgg caaaaaccgt attgccattg atattcttaa
     1441 agcacaaatt aagcaattac taaaataaaa taggagctaa atatgcgttt atgtgataca
     1501 gatattaaac gttacttaga tgaaggtatt attgccataa cgcctcgacc ttcagacgat
     1561 aaaatttctg gcgccactgc agatgtgcgt ttaggtaatt cgtttcgtgt atttcgtgaa
     1621 cataaaacgc cctatattga tttaagtggc cctagagaag aagttgccgc tcagttaaat
     1681 aaagtgatga gtgatgaaat tatcatcggt gatgatgaag catttttcct tcatcccggt
     1741 gaccttgcac tcgcaacaac ccttgaatcg gtttccttac cagccaatat cgttggatgg
     1801 ttagatggtc gttcgtcact tgctagatta ggcttaatgg tacacgttac cgcccacaga
     1861 atcgatccgg gttgggaagg caaaattgta ttggaatttt ttaatgctgg aaaattaccc
     1921 ctagctttac gccctaatat ggcaattggc gcattaagct ttgagatttt aagtggtgat
     1981 gctgcaaaac cctataatgc gcgaaaagat gcaaaatata agaaccagca aagtgccatt
     2041 tcaagtcgga ttaatcaaga ttaatatagt acatgccttg caatcataca ttaactatgt
     2101 tagtttttta atcagtttat tacacagtaa ggagtataac tatgttacat tatgcagtcg
     2161 tattttttgt catcgctata atcgcagcgc tattaggatt tggtggtatt gctggaagtg
     2221 ctactgaaat tgccaaaatt ctcttttttg tctttttaat acttactgtt atttcgttct
     2281 tcttcaagaa aaagtgacac agttaaacct aattttttaa gttaaaatat agttc
//
LOCUS       DANLZQ010000175         2285 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.176, whole genome shotgun sequence.
ACCESSION   DANLZQ010000175 DANLZQ010000000
VERSION     DANLZQ010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2285)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2285)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2285
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.176"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            95..523
                     /locus_tag="PXE50_002577"
     CDS             95..523
                     /locus_tag="PXE50_002577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HDL5623417.1"
                     /translation="MTHDWLYWALASALFAALTAIFAKVGLQGVDSDFATFIRTVVII
                     IALIAFLTYSGKWQPLDSLSSKNWLFLILSGLATGLSWSAYFKALQMGNASQVAPIDK
                     FSLVLVTLFAVIFLGERPSGQDWLGIGLVAGGVLLLAFKR"
     gene            529..1251
                     /locus_tag="PXE50_002578"
     CDS             529..1251
                     /locus_tag="PXE50_002578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase superfamily
                     protein"
                     /protein_id="HDL5623418.1"
                     /translation="MQNFANIEIAFIHRKAPLPSDFSYPEMPGGLTEKQVQKWQSRRV
                     AFFLLTELFKKHHLDLDLLADMQRSPSGRTFVDSEQIDFNISHSGEWIAVIFSYSFAK
                     LAVGIDIEHPQKIRRYHDLICHYGNAEEQNVLLANHSPILSNLAERFYLSWCLREAIL
                     KSQGVGIVKLSEVKHLPLEKQIFSAHCPKGKLHFVSELPFYLSYFYQQPQNMLLSEPL
                     LYHWQNGQFQPIKCQSLVYDVN"
     gene            1261..1680
                     /gene="psiE"
                     /locus_tag="PXE50_002579"
     CDS             1261..1680
                     /gene="psiE"
                     /locus_tag="PXE50_002579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate-starvation-inducible protein PsiE"
                     /protein_id="HDL5623419.1"
                     /translation="MPKKSLEEHHSSFGKIASETFQWIMNIALLVTGALLSYSLFAEA
                     YSLYELSFSDSEKFQIVEKIVIFFLYFEFLALIVKYFKSNYHFPLRYFLYIGITAMVR
                     LIIVDHSNALHTLLFALSILVMIIALYIVHTDRLHKS"
     gene            1689..>2285
                     /locus_tag="PXE50_002580"
     CDS             1689..>2285
                     /locus_tag="PXE50_002580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HDL5623420.1"
                     /translation="MKLTQYQHNDLQILNRETVYKGHFELQKITFRHKLFSGEMSGEV
                     VRELLIKGEAAALIAYDPTLDKVVLIEQVRIGAYDAGQKKSPWLLELVAGMVDKGNEE
                     PAEVAMREAKEEAGLEVTTVQHALSVWDSPGGQLERLHLFLGLIDSTQVKSGEVHGLL
                     EEENEDILVHVVSREQAYQWVEDGTIDNVIAVIGLQWLQ"
BASE COUNT          658 a          460 c          482 g          685 t
ORIGIN      
        1 cgaagatcaa atagaaaatt tgataaacta gaactaactc gcattttatt gctccatatg
       61 attagaaatt aacctaaaat attaaaattt tgttatgaca cacgattggc tctattgggc
      121 attagcctct gcactttttg cagcattaac cgccattttt gccaaagttg gcttacaagg
      181 cgtagattct gatttcgcca cttttattcg cacggtagtt attattattg cacttattgc
      241 ctttctcact tacagcggaa aatggcagcc gttagatagc ttgagcagca aaaactggct
      301 gtttttaatc ttatccggct tggcaacagg attgtcttgg tcggcgtatt tcaaagcatt
      361 gcaaatgggt aatgcttccc aagtcgctcc aatcgataaa ttcagcttgg tgttagttac
      421 cctttttgca gtaattttct taggcgaacg cccaagcgga caagattggc ttggcattgg
      481 cttagttgct ggtggcgtac tgttacttgc cttcaagcgg tgatttttat gcaaaatttt
      541 gcaaatattg aaattgcgtt tattcatcgg aaagcacctc tgccgagtga tttctcctac
      601 cctgaaatgc ccggcggttt aactgaaaaa caggtgcaaa aatggcaaag ccgccgagtc
      661 gccttttttc tgctgacgga attgtttaaa aaacaccatc tggatttaga tttattagct
      721 gatatgcaac gctccccaag cggtcgcact tttgtcgatt ctgagcaaat tgactttaac
      781 atcagccatt caggggaatg gatagcggtc attttttcgt attcttttgc aaaattagcg
      841 gtcggcattg atattgaaca cccacaaaaa atcagacgtt accacgattt aatctgccat
      901 tacggaaacg ctgaagaaca aaatgtttta ttagccaacc actcccccat tctaagcaac
      961 ctcgccgaac gcttttattt gagctggtgc ttgcgagagg cgatattgaa atcgcaaggg
     1021 gtggggattg tgaaactgtc cgaagtaaaa catttaccgt tagaaaaaca gatcttttcc
     1081 gcccattgtc cgaaaggcaa gctgcatttt gtgagcgaac tgccgttcta tttaagctac
     1141 ttctatcaac aacctcaaaa tatgctatta tctgaacctt tgctatacca ttggcaaaac
     1201 gggcagtttc agcctataaa gtgccaatca cttgtttatg atgttaatta aggataacga
     1261 atgcctaaaa aatctttaga agaacaccat tccagttttg gcaaaattgc ttccgaaacc
     1321 tttcagtgga ttatgaatat tgccttgcta gtaacaggag cattgctttc ttactcgctg
     1381 tttgctgaag cctattcact ctatgaactt tcctttagcg acagtgagaa attccaaatt
     1441 gtagaaaaaa tagtaatttt ctttctctat tttgagtttc ttgcgttgat tgtgaaatat
     1501 ttcaaatcga attatcactt tccgttacgc tatttcctct atatcgggat tactgccatg
     1561 gtgcgtttga ttattgtcga tcattctaat gcgttgcata cactattatt cgcactctct
     1621 attttggtga tgattatagc attatatatt gtacacaccg atcgtttaca taaaagctag
     1681 gaactaatat gaagctaacc caatatcagc acaatgattt acagattcta aaccgagaaa
     1741 ccgtctataa agggcatttt gagctacaaa aaatcacttt ccgccataag ctgttttccg
     1801 gtgaaatgag cggtgaagtg gtgcgtgaac tcttaattaa aggcgaagcg gcggctttaa
     1861 ttgcctatga tccaacctta gataaggtag tattaattga gcaagtgcgg attggagctt
     1921 acgatgcagg acagaaaaaa tccccttggt tgctggaatt ggttgccggt atggtagata
     1981 aaggcaacga agagccggca gaagtggcaa tgcgtgaagc caaagaagaa gccggcttgg
     2041 aagtcacaac agtgcaacac gccttaagcg tatgggacag tcccggtgga caactggaac
     2101 gcttgcacct gtttctcggc ttgattgaca gcacccaagt gaaatccggc gaggtacacg
     2161 gcttactgga agaagaaaat gaagacattt tggttcacgt tgtaagccgt gaacaggcat
     2221 atcaatgggt agaagacggc acaattgaca atgtgattgc ggtaattggg ctacaatggt
     2281 tgcaa
//
LOCUS       DANLZQ010000176         2245 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.177, whole genome shotgun sequence.
ACCESSION   DANLZQ010000176 DANLZQ010000000
VERSION     DANLZQ010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2245)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2245)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2245
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.177"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..1286
                     /locus_tag="PXE50_002581"
     CDS             <1..1286
                     /locus_tag="PXE50_002581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helicase/relaxase domain-containing protein"
                     /protein_id="HDL5623421.1"
                     /translation="AGLLSEIVQKADQHSVTLAIGGDVNKLVQRPVNSLPKQIVLALR
                     YLLEQKIKLNTPKGPADGWFTEDGLWLVSKTAADNIRTYLLGQGISVPKDNPKLFDEM
                     QSLGIVEESPSGGAIWSCRIQADSGWTPATTFTLLRVKPEVAWENINDRPAYFAGKVK
                     VIEQITEEVNAEVQPPLVEETTKISLLPSKQSEAIIPSEETEISKAITSSDNATSAEV
                     IINNENDLTSFVLDMFAPTETIEQNISVISSNKEQQIVMTTLTEQEKVPPKKVKLEKS
                     KKKNLQLTTLEPWNDMINPITGKEFVNWLKEGIATNKFAINKPSAKLHIVDGNLFLVT
                     PVIFEMYLQECGQPYDKETINNLQYDFQGLGLHSLKKTMTNGKPDTINFWKCDVIGPR
                     KTSSLTGYLIKNTHLLFGDKMLLNNHCLTLQEEDT"
     gene            1326..2204
                     /locus_tag="PXE50_002582"
     CDS             1326..2204
                     /locus_tag="PXE50_002582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDL5623422.1"
                     /translation="MFFYRHYLRADTKRSYNNIIRIIKKRYPNLNANDVTTDMLIEWR
                     NQVVGNTIKAVTWNNYVRHLKALYNFAIAQGLLCMSSNPFNHLFIRESRRKKKTYSSE
                     QLHKIDYILHNNIILPSFLKPSWFILAIIMTLRCTGIRRGQLVKLKIGDVNLSNRTIY
                     ISPEINKNHDYHIVPISDSLYPHIERLIQELKIHKQTDDCQLFNLNLFSRYTRRKGQP
                     MSQNQLTHIFRHISDLVGFTSSPHRFRHTVATQLMKKPENVYVVKKLLGHKDISVTLG
                     YIEYDVEMLRDTVNLL"
BASE COUNT          779 a          370 c          435 g          661 t
ORIGIN      
        1 aagccgggct tttatctgag atcgtgcaga aagccgatca gcatagtgtt acgctagcaa
       61 tcggtggcga tgtgaataag ctggtacagc gaccagttaa ttcattgccg aagcaaattg
      121 tgctggctct acgttattta ctggagcaga aaatcaaatt aaatacgcca aaaggaccag
      181 cagacggctg gtttaccgaa gatgggctgt ggctggtaag taaaactgct gccgataata
      241 tccgaactta tttactggga caggggattt ccgtgcctaa agataatcca aaactgtttg
      301 atgaaatgca atctcttggt attgtggaag agtctccttc cggcggtgca atttggagct
      361 gccgtatcca agccgattcc ggttggacac cggcgacaac atttacgcta ttacgagtta
      421 aaccggaggt tgcttgggag aatatcaacg atagaccggc gtattttgcc ggaaaagtca
      481 aagtgattga acagataact gaagaggtca atgcagaggt tcagcctcca ttagttgaag
      541 aaaccactaa aatttctcta ttaccgagca agcaatcgga ggctattatt ccgtctgagg
      601 aaacggaaat atcgaaggca attacaagtt cagacaatgc aacatctgcg gaagtaatca
      661 taaataatga aaatgattta acttcttttg tattggatat gtttgctcct acagagacaa
      721 ttgagcaaaa tatttctgtc atttcttcaa ataaagagca gcaaatcgta atgacaacac
      781 ttacggaaca agaaaaagtt ccgccgaaaa aagttaaatt agagaaaagt aagaaaaaaa
      841 atcttcaatt aaccactcta gaaccatgga atgatatgat taatccaatt actggaaaag
      901 aattcgtaaa ttggttgaag gaggggatag caaccaataa atttgcaatt aacaaacctt
      961 ctgcaaaatt acatatagta gatggtaatt tatttttagt cacaccagtt atttttgaaa
     1021 tgtatttgca agaatgtggc caaccttatg ataaggaaac tataaacaat cttcagtatg
     1081 atttccaggg gcttggtctt cattctctta aaaaaaccat gactaatggt aagccagata
     1141 caataaattt ttggaagtgt gacgtgattg gtcctagaaa gacttcctct ttaacaggat
     1201 atttgataaa aaatactcat ctcttatttg gggataaaat gttactaaat aaccactgtt
     1261 taactttaca ggaagaggac acataatatg gattctaaga tttccttcga tatattattg
     1321 gaacgatttt tttctatcgt cattatttac gggcggacac gaaacgaagt tataacaata
     1381 ttattcgaat tatcaaaaag cgttatccaa acttaaatgc gaatgatgtg actactgata
     1441 tgttaattga atggcgtaat caagttgttg gtaatacaat taaagctgtg acgtggaata
     1501 attatgtgag acacctaaaa gcattatata attttgcgat agcacagggg ctactttgca
     1561 tgagtagtaa tccatttaat catttattta ttagagaatc tagaagaaaa aagaaaactt
     1621 attccagtga gcagttgcat aaaatcgatt atattctaca taataatatc atcttaccta
     1681 gttttttaaa acctagctgg tttattcttg ctatcattat gacattgaga tgcacaggaa
     1741 ttaggagagg gcaattggtt aaactgaaaa tcggtgatgt taatttatca aataggacga
     1801 tctatatttc accagaaatt aataaaaacc atgattatca tatagtaccg atatccgatt
     1861 cactttatcc ccatatagaa aggctgattc aggagttaaa gatccataaa caaacggatg
     1921 attgccagtt atttaacctc aatttatttt ctcgttatac tcgtaggaaa ggtcagccga
     1981 tgagccaaaa ccagcttact catatattta ggcatatttc cgatttggtt ggcttcacgt
     2041 catcaccaca tagatttcgg catacagtag ctactcaatt gatgaagaaa cctgaaaatg
     2101 tttatgtagt taagaaatta ttaggtcata aagatatcag cgttacatta ggatatattg
     2161 aatacgatgt ggaaatgcta cgagacaccg tgaacttact ctaataaaag agaaatgaga
     2221 gaaaactatt ctctcattta ttgtg
//
LOCUS       DANLZQ010000177         2223 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.178, whole genome shotgun sequence.
ACCESSION   DANLZQ010000177 DANLZQ010000000
VERSION     DANLZQ010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2223)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2223)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2223
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.178"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            252..500
                     /locus_tag="PXE50_002583"
     CDS             252..500
                     /locus_tag="PXE50_002583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623423.1"
                     /translation="MISGEKMTWESLGASAIGGAIGGGIGATMKAGAVTASTLSALGG
                     GMGEGLYKSTSQGIKNSIGIKASCNQSGSDYGDGCDYQ"
     gene            512..715
                     /locus_tag="PXE50_002584"
     CDS             512..715
                     /locus_tag="PXE50_002584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623424.1"
                     /translation="MKIQFPISYQEFRENYFEKKPLLMKGAISQKDLLSWKSINEILP
                     RCDLISEDAIKVMHKGKRAHKKD"
     gene            754..1396
                     /locus_tag="PXE50_002585"
                     /pseudo
     CDS             754..1396
                     /locus_tag="PXE50_002585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611451.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            1402..1740
                     /locus_tag="PXE50_002586"
     CDS             1402..1740
                     /locus_tag="PXE50_002586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623425.1"
                     /translation="MYYSPKDYLEEYNDLGTIRYKFQEENLYGFLRDGATLVANGIVN
                     EPSVDCFSQEIAQFTGCHIFSSLYIAFNTQRSFKSHWDSRDIFAVQMQGKKRWIIHTP
                     TFKKTIVYAS"
     gene            1730..>2223
                     /locus_tag="PXE50_002587"
     CDS             1730..>2223
                     /locus_tag="PXE50_002587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin-like domain-containing protein"
                     /protein_id="HDL5623426.1"
                     /translation="MHRSKDMPEYAPNLDDVYMDIVLEAGDVLYLPRGWWHDPIPVGE
                     ETVHLAVGIFPAYTHNYLTWVSQNMVEKEIARASLSHYESDKELIAQLAEQTAEYIKD
                     KENYHKFIENFYDQKRVEKPLNLETLGNYQYDSISENQKISFKAKNHYFGYENKIISN
                     GYGIS"
BASE COUNT          745 a          313 c          471 g          694 t
ORIGIN      
        1 tatattgatt atcccattca tattatcaag aattgtgtct attcttcttg taaagaagat
       61 tgtaaaaaat aaaaatgtac aagatgttat tgaggctata gttctaatag tatttgttgt
      121 aattataaac atcatagagg aatatctctt atgaaagagt taaaaattga ggattgccaa
      181 tttgtttcgg caggcttgca cttgttattg taggagctgt tgctggagct gcatattatg
      241 ttgggaatgg tatgatttct ggggaaaaaa tgacttggga gagtttggga gcatcagcta
      301 taggtggggc tattggtggc ggtattggag caacaatgaa agctggtgcg gtgacagcgt
      361 caaccttatc tgctttaggt ggtggtatgg gggagggctt gtataaaagt acttctcaag
      421 gtatcaaaaa tagtattggt ataaaggcga gttgcaatca atcaggttcg gattatggtg
      481 atggatgtga ttatcaataa gagagtatat tatgaaaatt caatttccaa tttcttatca
      541 agaatttcgt gaaaactatt ttgagaaaaa accactttta atgaaaggag caatatctca
      601 gaaagattta ctttcttgga agtcaataaa tgaaatatta cctcgctgtg atttaatttc
      661 tgaggatgca attaaggtaa tgcataaagg gaaaagggct cataaaaaag attaggggct
      721 gtagtagatt agcatcactg ctatactaca aaaatgaaga taacccattg taaattaaag
      781 aaatctttgc agaaaaagct tcttgaattt tttgttgctg aagtgaccgc tagaaccgct
      841 gctgatttat taggtattca acccaatacg gcagccctgt tttaccacaa aattaggctg
      901 gtcattgaac accatttagc ccttgaagct catgaaattt ttgagggaaa aattgaggta
      961 gatgaaagct attttggtgg tcatcgcaaa ggaaaacgag ggcgaggtgc ggctgggaaa
     1021 gtcgctgtat tcggtttgtt gaagcgtcaa ggaaaggtgt ttacaaaata ccaaatcaga
     1081 aacgctaatg ccggttatta caaggaaaat caagcctgac agctgggttt atacggatac
     1141 ctatcgtagc tatgatgccc ttgatgtgag cgaatttcat cacgagcgaa tcaaccattc
     1201 cgaactgttt gcggagaaac aaaaccatat caatggcatt gaaaattttt ggaatcaagc
     1261 gaagcgagta ctccgaaaat ataacggaat taaccgaaaa aatttccctt tattcttgaa
     1321 ggaatgtgaa tttcggttta actttggtac accaaaagaa cagctcaaaa cgttgcgaaa
     1381 atggtgtgag atttagggct aatctactac agccccaaag attatttaga agaatataat
     1441 gatctaggta ctattcgtta taaatttcaa gaagaaaatt tatatggttt tttaagagat
     1501 ggggcaacat tagtcgcaaa tggtattgta aatgaaccaa gtgttgattg cttctctcaa
     1561 gagatagctc aatttacagg ctgtcatatt ttttcaagtt tatatattgc gtttaatact
     1621 caaagatctt ttaaaagcca ttgggatagt cgtgatattt ttgcagttca aatgcagggt
     1681 aaaaagcgtt ggattattca cactccaaca tttaaaaaaa ccattgttta tgcatcgtag
     1741 taaagatatg cctgaatatg ctcctaatct tgatgatgta tatatggata ttgtattaga
     1801 agctggagat gttctttatt tacctcgtgg ctggtggcac gatcctattc ctgttggaga
     1861 agaaactgtg catttagctg taggcatttt tcctgcttat actcataact atctgacttg
     1921 ggtatctcaa aatatggttg agaaagaaat tgcccgagct tctttatcgc attatgagtc
     1981 agataaagag ttgatagcac agttggcaga acaaacagca gaatatatta aagataaaga
     2041 gaattatcat aaatttatag agaattttta tgatcagaag cgggttgaaa agccacttaa
     2101 tttggaaact ttaggaaatt atcaatatga ttctatttcg gaaaatcaaa aaatttcatt
     2161 taaagccaaa aatcactact ttggttatga aaataagata atttcaaatg gatatggtat
     2221 ttc
//
LOCUS       DANLZQ010000178         2164 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.179, whole genome shotgun sequence.
ACCESSION   DANLZQ010000178 DANLZQ010000000
VERSION     DANLZQ010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2164)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2164)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2164
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.179"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            138..1283
                     /gene="lldD"
                     /locus_tag="PXE50_002588"
     CDS             138..1283
                     /gene="lldD"
                     /locus_tag="PXE50_002588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-dependent L-lactate dehydrogenase LldD"
                     /protein_id="HDL5623427.1"
                     /translation="MIISSANDYRRAAKRRVPPFMFHYADGGSYAEQTLRRNVSDLED
                     IALRQRVLKDMSQLDTGIELFGEKLSMPVTLAPVGALGMYARRGEVQAAKAADNKGIP
                     FTLSTVSICPIEEVAPAIKRPMWFQLYVLKDRGFMKNALERAKAAGCSTLVFTVDMPT
                     PGARYRDMHSGMSGPYKDIRRVLQAMVHPFWAWDVGIHGKPHTLGNVSNYMGKPIDLN
                     NYIGWLTDNFDPSISWKDLEWIREFWDGPMVIKGILDPEDAKDAVRFGADGIIVSNHG
                     GRQLDGVLSSAKALPSIADAVKGEIKILADSGIRNGLDVVRMLALGADCTMIGRSFVY
                     ALSAAGQAGVENLLDIFLKEMKVAMTLTSNAKISDIGRDALVDLSNL"
     gene            complement(1337..1606)
                     /locus_tag="PXE50_002589"
     CDS             complement(1337..1606)
                     /locus_tag="PXE50_002589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623428.1"
                     /translation="MLSEERFGFFYIFIFIYFSLLSLSIGYIRPELRTTYDYLEIENK
                     RYYVLSIHRNNIYVLGEKTKDNDEFLFFNQDTLKYYRINITKMPN"
     gene            complement(1681..2067)
                     /locus_tag="PXE50_002590"
     CDS             complement(1681..2067)
                     /locus_tag="PXE50_002590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623429.1"
                     /translation="MTNQKFINSSLTLAFFTLISFSTAYCYAWGIAAFHGYPWWHVEV
                     GNAGIARALAYVFGTFLTIFLFYLIGYALVNKVFKLHYFKYLGWLRVSVLVTIFSLPV
                     MISFYLFIGKVPMYLHLLYLGTTTSI"
BASE COUNT          648 a          437 c          488 g          591 t
ORIGIN      
        1 gcaattgtat ttttatgcta attggtttgt aacaaaaatg tgatctattt ctcatatttt
       61 gcaaatagta gtaattctta tttttatttt aaagtagaat agccgcactt ttttcttaat
      121 gatttatgag gttttaaatg atcatttcat ctgcaaacga ttaccgccgt gcggcaaaac
      181 gtcgtgttcc cccttttatg ttccattatg cggatggcgg ttcttacgcc gagcagacct
      241 tacgtcgtaa tgtgagcgat ttggaagaca tcgccctgcg tcaacgtgtg ttaaaagata
      301 tgtcgcaact agacaccggc atcgagctgt tcggcgaaaa actgtctatg ccggtgaccc
      361 tcgcccctgt cggtgcatta ggaatgtatg cccgccgtgg cgaagtgcaa gcggccaaag
      421 ccgcagataa caaaggtatt ccgtttaccc tttccactgt ctctatttgc ccgattgaag
      481 aggttgcacc ggcaatcaaa cgcccgatgt ggtttcagct ctatgtgtta aaagatcggg
      541 gctttatgaa aaatgcattg gaacgagcca aagccgccgg ttgttccacg ctagtgttta
      601 ccgtagatat gccgaccccc ggcgcacgtt atcgtgatat gcactccgga atgagcggcc
      661 catacaaaga cattcgccgt gtgttgcagg caatggttca cccgttttgg gcgtgggacg
      721 tgggcattca cggtaaaccc cacacgttag gcaatgtgtc aaactatatg ggtaaaccga
      781 ttgatctgaa caactacatc ggctggctga ccgataattt cgacccatca atttcgtgga
      841 aagatttaga gtggattcgt gaattttggg acggcccgat ggtgatcaaa ggcattctcg
      901 acccagaaga tgctaaagat gccgtaagat ttggtgcgga cggtatcatc gtctccaacc
      961 acggtggtcg tcagttagat ggggtacttt cttctgccaa agccctgcca agcattgccg
     1021 atgcagtaaa aggggagatc aaaatccttg ccgactctgg tatccgcaac ggcttagatg
     1081 tggtgagaat gctggctctc ggcgcagatt gtacgatgat cgggcgttcc tttgtttacg
     1141 ctcttagcgc cgccggtcaa gccggtgtgg aaaacctgct cgacatcttc cttaaagaaa
     1201 tgaaagtggc gatgacactt accagcaatg ctaaaattag cgacatcggc agagatgctt
     1261 tggtagattt aagtaatctt tagctcaaat agccacaatc cgcacgtttt aggtgcggat
     1321 tgttatttta gataggctaa tttggcattt tggtaatatt aatgcggtaa tatttcaatg
     1381 tatcttggtt gaaaaagaga aattcatcgt tatctttagt tttttcgccc agcacataaa
     1441 tgttattgcg atgaatagat aagacataat atcgcttatt ttcaatttca agataatcat
     1501 acgttgttct cagctcaggg cgaatgtagc caatactcaa agaaagtaag ctaaaataga
     1561 tgaaaataaa aatatagaaa aaaccgaagc gttcttcgct taacattttt tgaatatcta
     1621 agtggaatac gcggtggccc caatgtttgt gaaataataa tactgatagg gtagttgtcc
     1681 ctagatagag gtagttgtcc ctagatagag taggtgtaaa tacattggca ctttgccaat
     1741 aaacagatag aaactgatca ttactggcaa gctaaaaata gtaacaagaa cactcacccg
     1801 tagccagcca aggtatttaa agtaatgcag cttaaaaact ttattaacta aagcgtatcc
     1861 tatcaaataa aaaagaaaga tagttaaaaa tgtgccaaaa acgtaggcta gtgcgcgagc
     1921 tataccggca ttaccaacct caacatgcca ccacgggtag ccatgaaaag cagcaatacc
     1981 ccaagcataa cagtaagcgg tagaaaaaga gattaaagta aagaaagcga gagtaagaga
     2041 agagttgatg aatttctgat tagtcataac agtaaataga ttgcacctac ttagttaaag
     2101 atgaaacaca agaaagcaga ctgagtttag cttccaccca actcctttgt ttagaggaga
     2161 actt
//
LOCUS       DANLZQ010000179         2105 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.180, whole genome shotgun sequence.
ACCESSION   DANLZQ010000179 DANLZQ010000000
VERSION     DANLZQ010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2105)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2105)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2105
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.180"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(85..2046)
                     /gene="recD"
                     /locus_tag="PXE50_002591"
     CDS             complement(85..2046)
                     /gene="recD"
                     /locus_tag="PXE50_002591"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HDL5623430.1"
                     /translation="MLNLLLELKQEKAISDLNYQFARFIDNKQKPYGYSPLEQDLAVL
                     AAALVSYQVGLGHTALRLENLSLSSLFELNSKPQTYHLLEQILQKIEQIPPLEWQSVL
                     KNHIAFSYSPETIKPMLFQNSLLYFYRYWQAEHRIAGYLQQAVDFSEKFANTELNQSI
                     LNQLFTGKAQTIDWQKIAVATALEKQFSLISGGPGTGKTTTVVKLLLGLQLKQQALQK
                     PYLQIALAAPTGKAAARMKESLESKLAEEKGLSEELKRSIPTEAVTIHRLLGARPLTE
                     KTKYHTKNPWHYDLVVLDEASMIDLSMMEKVVQALKPNSRLIMLGDKDQLASVEAGSI
                     MGELGSFIDNGYSQSHCDYLKAVTDYQIEAGNALPIGDCLSHLKHSYRFGEKAWIGEL
                     ANAVNDQKINLSWEIFDKYKNSDKLENFCYPETKETTDKSSWIEKSVQMVVDKAVELY
                     RDYLQAVQKREKNPDSVSVKAIFEKFQKVRILSALRVSELGVERLNMAIAEGLRKASL
                     VKFNHSRDRYIGKPILMTENMPINSIASGDVGIILPDENGESRVYFDSLQENREHHSL
                     PLGRVSNYEAAYIMTVHKSQGSEFEHTVLVLPHSISPVLTKELIYTAITRAKDKFTLF
                     GSEKVWKYSVGAKTERQSGLKEQIRGKFS"
BASE COUNT          596 a          456 c          363 g          690 t
ORIGIN      
        1 aaacaaaaac aacgcaagcg gtttttgtaa aaaatttgaa aaaaatgacc gcttgcgtat
       61 ttttacggca aaacgagtat taatttagct aaacttgcct cttatttgtt cttttagccc
      121 actttgtctt tcggttttgg caccaacact gtatttccaa actttttcgc taccaaataa
      181 ggtaaattta tcttttgccc ttgtgattgc ggtgtaaatc aactctttcg tcagcaccgg
      241 ggaaatcgaa tggggcaaca ccaataccgt atgttcaaat tcagaacctt gcgatttatg
      301 cacagtcata atataagctg cttcataatt tgaaacccta cctagaggca aactatggtg
      361 ttctctattt tcctgtaagg aatcaaaata aactcggctt tctccatttt cgtccggcaa
      421 aatgatgccg acatcaccgc tggctatgct atttatcggc atattttctg tcattaaaat
      481 cggttttccg atatagcggt ctcggctatg attaaatttc actaagctag ctttccgcaa
      541 gccttccgca atcgccatat taagacgttc aacccccagt tcacttaccc ttaaggctga
      601 taaaattcgg actttttgaa atttctcaaa aatcgctttc acactcactg aatctggatt
      661 tttctcccgt ttttgaaccg cttgtaaata atcacgataa agttcaaccg ctttatccac
      721 caccatttgc acactttttt caatccagct tgatttatcc gttgtctctt tcgtttccgg
      781 ataacagaaa ttttctaact tatcactgtt tttatatttg tcgaaaatct cccacgaaag
      841 gttaattttt tgatcattta ctgcatttgc aagctctcca atccaggctt tttcgccaaa
      901 tcgatagcta tgttttaagt gagataaaca atcaccaatc ggcaacgcat taccggcttc
      961 aatttggtag tcggtaacgg cttttaagta atcgcaatgg gattggctat aaccattatc
     1021 aataaaagag ccaagttccc ccataattga accagcttcc acagaagcaa gctgatcttt
     1081 atctcccagc attatcaagc gagagtttgg tttgagcgct tgaacaactt tctccatcat
     1141 tgataaatca atcattgaag cctcatctaa tacgaccaaa tcatagtgcc acggattttt
     1201 ggtatgatat ttggttttct cagttaatgg tctcgcacca agcaagcgat gaatagtcac
     1261 tgcttcagtt ggaatagagc gttttaactc ctcagataac cccttttctt ccgccaactt
     1321 gctttccagc gactctttca ttcttgctgc tgcttttccg gttggtgcag ccagagcgat
     1381 ttgcaaatat ggtttctgta gtgcttgctg ttttaattgc agcccgagta ataattttac
     1441 taccgtagtt gtttttccgg ttcccggccc acctgaaatt aagctaaact gcttttctaa
     1501 tgctgttgca acggcaatct tttgccagtc gatagtttga gctttcccag tgaatagttg
     1561 gttgagaatg ctttggttta attcggtatt tgcaaatttt tccgaaaaat caaccgcttg
     1621 ttgtaaataa ccggcaatgc gatgctccgc ttgccagtag cgataaaaat agagcaagct
     1681 gttttggaat aacatcggtt taattgtttc gggagaatag ctaaaagcga tatgattttt
     1741 cagcacactc tgccattcaa gcggtggaat ttgctcaatt ttttgcaaaa tttgttcgag
     1801 caaatgataa gtttgtggct tgctatttaa ttcaaaaaga gaagaaagac tgagattttc
     1861 caaacgtaat gccgtatgcc caagtcccac ttggtaagaa accaacgcag cggctaacac
     1921 agctaaatct tgctccaaag gcgaataccc atagggtttc tgcttattat caataaaacg
     1981 ggcaaattga taatttaagt cagaaatcgc cttttcttgt ttaagttcca ataataaatt
     2041 cagcataatc aaaccttaaa tcgaccacct aacattaagt gataatacta atcttttttg
     2101 catta
//
LOCUS       DANLZQ010000180         2079 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.181, whole genome shotgun sequence.
ACCESSION   DANLZQ010000180 DANLZQ010000000
VERSION     DANLZQ010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2079)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2079)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2079
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.181"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            168..608
                     /locus_tag="PXE50_002592"
     CDS             168..608
                     /locus_tag="PXE50_002592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3577 domain-containing protein"
                     /protein_id="HDL5623431.1"
                     /translation="MTTQTSTQKNYFNLHTTGIGYLSNIRTVTPKKGDEFLACTIGAL
                     IGEAGEGAKAEYRYFDCKVVGEAAIDLVNRAKASVEADKKVLISFVLADLWTDTFTYQ
                     KDGKNHKKGDTGVMLKARLIRIKSVKIDGVVKYQEPEKIDAQSE"
     gene            715..1362
                     /locus_tag="PXE50_002593"
     CDS             715..1362
                     /locus_tag="PXE50_002593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3560 domain-containing protein"
                     /protein_id="HDL5623432.1"
                     /translation="MTINTYAKFAPTVFVAKCPEAHTKGEIITLTSKYGNETEVQIHN
                     LVKQDNEHYYYSFTRCDGMDSQSFAQQKAERYQGYADNATKRSQSWANAANEGLEFLR
                     LGEPIKIGHHSEKRHRNLIERNARRMDNALSEMNKTESYESRIAYWEKMAGKIDLSMP
                     ESLEYFKFELDKAKEKHKELKDNPEKREHGYSLTYAKKAVNELEKKVKLAELLWA"
     gene            1386..1793
                     /locus_tag="PXE50_002594"
     CDS             1386..1793
                     /locus_tag="PXE50_002594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme utilization protein"
                     /protein_id="HDL5623433.1"
                     /translation="MNRQGVYINGKQVFDSKGKEINSIEIIGSTVQTVVGINKGSISM
                     VSSNNALIVDGQTIAFEPSPTIHIEVFGNITNLNSGAGNVNIKGDVSHIETVSGDVNV
                     DGTVTSDVRTVSGDIRCKTIAGKVETISGDIYR"
     gene            1871..>2079
                     /locus_tag="PXE50_002595"
     CDS             1871..>2079
                     /locus_tag="PXE50_002595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623434.1"
                     /translation="MKDILLDFDDTSCYLGDWEEILEEYNDRVRVEDFWHYAKEFETV
                     PHLGNLYQEHVILKLIARFCIELDI"
BASE COUNT          686 a          362 c          437 g          594 t
ORIGIN      
        1 ccagcattcc gaaagggaac tccacaatat tgtgggaatg ccgattaaac ctctaccatt
       61 tcggtgaatt tacatcgaaa tttcatttaa cttccacctt gcggggaaca tttttcccgt
      121 gttgggtaag gatgtttctc cgctttttta ctttggagaa acagactatg acaactcaga
      181 cttctactca aaaaaattac ttcaatcttc acacaaccgg aatcggctat ctgagcaata
      241 tccgcacagt gactccgaaa aaaggtgatg aattcttagc ttgtactatt ggtgctctca
      301 ttggagaagc aggagaaggt gcaaaagcag aatatcgcta ttttgattgc aaagttgtgg
      361 gcgaagctgc gattgatttg gtcaatcggg caaaagcctc tgttgaagct gataagaaag
      421 tactcatctc tttcgtttta gctgaccttt ggacagatac tttcacctat caaaaagatg
      481 gaaagaatca caaaaaaggt gatactggtg taatgctgaa agctcgctta attcggatta
      541 agtctgtcaa aattgatgga gtggtaaaat accaagaacc agaaaaaata gacgcacaat
      601 ctgagtaatt ttacctaagc ccgacatttt atgttgggct ttactttatg tcccgtaggg
      661 aaatgctccc tgcggtgtgt ttcccttcat ttttacaatt ttaggagaaa cactatgact
      721 attaacactt atgcaaaatt tgcacctact gttttcgtag caaaatgccc tgaagcacat
      781 accaaaggtg aaattatcac tctaaccagc aaatatggta atgaaaccga agttcaaata
      841 cataacttag tgaagcagga taatgagcat tattactatt ctttcactcg ttgtgatggg
      901 atggatagtc agtcatttgc tcaacaaaaa gcagaacgct atcaaggcta tgcagataat
      961 gcaaccaaac gcagccaaag ctgggcaaat gcagctaatg aggggctgga gtttttgaga
     1021 ctaggtgagc caataaaaat tgggcatcat agtgaaaaac gccaccgtaa cctcattgaa
     1081 cgtaatgccc gtcgaatgga taatgcgctt tcagaaatga acaaaacaga aagctatgaa
     1141 tcccgtattg catattggga aaaaatggca gggaaaattg acctttctat gccggaaagt
     1201 ctggaatact ttaagtttga attggataaa gccaaagaaa agcataaaga attgaaggac
     1261 aaccctgaga aacgagagca tggttattca ctgacttatg ctaaaaaagc agttaatgaa
     1321 cttgagaaaa aagtgaaatt agctgaatta ctttgggcat aatttttaca tagaggatta
     1381 ttaatatgaa tcgacaaggc gtttatatca atggtaaaca agtctttgac tctaaaggca
     1441 aagagattaa tagcattgaa atcattggta gcacagtgca aacagtcgtt gggataaata
     1501 aaggatctat ctcaatggtc tccagcaaca atgcattaat tgttgatggg caaacaattg
     1561 catttgaacc ttctccgact atccatattg aagtatttgg taatattacc aatctcaatt
     1621 caggagcagg aaatgtgaat atcaaaggtg atgtaagcca tatagagact gtgagtggtg
     1681 atgtgaatgt tgatggtact gtgacttcag atgtaagaac agtaagcggt gatattcgct
     1741 gtaaaactat tgcaggtaaa gtcgaaacca tcagcggaga tatttatcgc taatttttgc
     1801 tacttaccct atcgggaaac attcccgata ggtgtgtttc cccactttta tttaaatttt
     1861 ggagaaacat atgaaagaca ttcttttgga ttttgatgac acctcttgtt atttaggtga
     1921 ttgggaagag atactagaag aatacaatga tcgtgttcga gttgaggatt tttggcatta
     1981 cgctaaagaa tttgaaaccg tacctcattt gggcaaccta taccaggagc atgtcatcct
     2041 gaagttgatt gctcgattct gtattgaact ggatattga
//
LOCUS       DANLZQ010000181         1923 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.182, whole genome shotgun sequence.
ACCESSION   DANLZQ010000181 DANLZQ010000000
VERSION     DANLZQ010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1923)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1923)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1923
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.182"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(<1..442)
                     /locus_tag="PXE50_002596"
     CDS             complement(<1..442)
                     /locus_tag="PXE50_002596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HDL5623435.1"
                     /translation="MPNFSFTHLYKKHTKELPTVTLLSALIGLSQVSYANPLPLGNTT
                     GTNNLAVGEGSFALGTGSQAIGKNAIATGGNISPQEFNVELENFRDLVNQIEELRTQI
                     AEQEKQGSVNQQLQDALKSQIAQYDTILERVREKQAQQAILANSV"
     gene            complement(636..1865)
                     /locus_tag="PXE50_002597"
     CDS             complement(636..1865)
                     /locus_tag="PXE50_002597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--glyoxylate aminotransferase family
                     protein"
                     /protein_id="HDL5623436.1"
                     /translation="MQFREINPSPRLLMCPGPTDADPRVLRAMSAPILGQFDPEFTSL
                     MNETMEMERRLFQTKNEQTYVVNSTSRGGLETVLTAAICPGDKVLIPAFGRFGYLLNE
                     ILARSGADITIIEREWGTVFEPEEIEAELKKGGYKAVAIIHGETSTSMMQPLEEIGKI
                     CKQYDAMLIVDTVATLGGVDIRVDEWGIDACIGGTQKCISAPSGTALITYNKRIEEII
                     AKRKRVEKGIRAESDVDGTLPPIPSNYLDLAQLQDYWSPRRLNHHTETTSAQYGVHEA
                     LRIILQEGLEARFARHILNDKALCAGLEAMGLKIFGDRKHKAPVVTAFHIPEGMSGPA
                     LRSDILNHFGIELATSFGPLDGKVIRIGNMGFSSQKRNVLLTLGALEAVLLSHKVKVP
                     SGDAVAAALAVYKEADK"
BASE COUNT          549 a          369 c          382 g          623 t
ORIGIN      
        1 taacactatt ggctaatatt gcttgttgtg cttgtttttc acgtacacgc tctaaaatag
       61 tgtcatattg agcaatctga ctctttaaag catcttgtaa ttgttgatta acagagcctt
      121 gtttttcttg ttcagcaatt tgagtacgta actcttcaat ttgattaact aaatcacgga
      181 agttttctaa ctccacattg aattcctggg gggagatatt accaccggtt gcaatggcat
      241 tcttgccgat tgcttgagaa cctgtgccta acgcaaaact accttcacct acagcaaggt
      301 tattggtgcc agtggtgttg cctaaaggaa gtggattggc ataagagact tggctaagcc
      361 ctatcagagc gctaagcaag gtaacagtag ggagctcttt tgtgtgtttt ttatacagat
      421 gggtgaaact aaagtttggc atatcaaaat ttcctcatta aaacttttac ttttcattct
      481 taaaaaaatg ctccgtgtca taatatttaa tttgattaaa tgaaatagga aaagattaaa
      541 tttgtgaaaa tattttgagt ttctgtggtt ttactgtgga taaatatcca cagtattaat
      601 tattagtgag ttgtattgta aatttaggaa ggtggttatt tatcagcctc tttatagact
      661 gccaaggcag ctgcaaccgc atcgcctgaa ggcactttta ctttatggct taaaagtacg
      721 gcttctaacg cacctaaggt taaaagtacg ttacgttttt ggcttgagaa acccatatta
      781 ccgatacgga ttacttttcc atctaagggg ccgaatgagg tggctaattc aataccgaag
      841 tggtttaaaa tatcactacg caatgctggg ccactcatac cttctggaat gtggaatgcc
      901 gttacaacgg gggctttatg tttgcgatcg ccaaaaattt tcaaacccat tgcttctaaa
      961 cctgcacata atgctttgtc gtttaaaata tggcgagcaa aacgagcttc taagccttct
     1021 tgtaaaataa tgcgtaacgc ttcgtgtaca ccatattgtg cagaagtggt ttctgtgtgg
     1081 tgatttaaac ggcgtgggct ccagtaatct tgtagctgtg ccaagtctaa gtagttactt
     1141 ggaattggcg gtaatgtgcc atctacatca gactctgcac gaatgccttt ttccacacgt
     1201 ttacgttttg caataatctc ttcaatccgt ttgttataag tgattaaagc tgtgcctgat
     1261 ggggcggaaa tacatttttg tgtaccgccg atacaagcat caatgcccca ttcatccaca
     1321 cgaatatcta caccgcctaa ggttgcaacg gtatctacaa ttaacattgc atcatattgt
     1381 ttacagattt tgccgatctc ttctaacggt tgcatcatag aggttgaggt ttcgccgtga
     1441 ataatagcaa ctgctttata gccgcctttt ttcaactctg cttcaatttc ttctggttca
     1501 aatacggttc cccactctct ttcgataatg gtaatatctg caccgctacg agctaaaatt
     1561 tcatttaata aataaccaaa acgaccaaat gcaggaatta acactttatc gcctgggcaa
     1621 atcgctgcgg ttagaacagt ttctaagcca ccacgagagg tggagttgac tacataagtt
     1681 tgctcatttt tggtttggaa taaacggcgt tccatttcca ttgtttcatt cattaatgag
     1741 gtaaactcag ggtcaaattg ccctaaaatg ggtgcagaca ttgcacgcaa aacacgtggg
     1801 tcagcatctg ttgggccagg gcacattaat aaacgagggg agggattaat ttctctgaat
     1861 tgcataatta tttcctataa ttgaatgaat taaaaaaact tatggattct ataataaaaa
     1921 ttt
//
LOCUS       DANLZQ010000182         1915 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.183, whole genome shotgun sequence.
ACCESSION   DANLZQ010000182 DANLZQ010000000
VERSION     DANLZQ010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1915)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1915)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1915
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.183"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(57..347)
                     /locus_tag="PXE50_002598"
     CDS             complement(57..347)
                     /locus_tag="PXE50_002598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623437.1"
                     /translation="MNNLSEFKLRYINNPYSNKDTFFIFDELSILLKSLTSDELKKIG
                     TAKNLADRQLNKQRKRCKRYVSEAYRLVEDNKEPYSKFFNHDGITAYNIKAF"
     gene            complement(397..1161)
                     /locus_tag="PXE50_002599"
     CDS             complement(397..1161)
                     /locus_tag="PXE50_002599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005704989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL5623438.1"
                     /translation="MPNITPKLVINALEPAKEKGIGDTLKRAIRLLNEVMNFAVNADV
                     IEFNKCQNVGSNFSVAKSEHNPTIHPKELPQFLAALRDYNLSFQTKMLIKWQLLTMTR
                     SREASETLWSEIDLEAKTWTISAERMKMKRPHVIPLSRQAVEILERMRKITGNSPFVF
                     QSEMKPRQPMNSQTANRAIGLLGYAGTLTAHGMRSIASTYLNEQLVNYDVVEACLAHV
                     IKDQTRKAYNRSDYLDQRVDVMQQWADYVESCSTGI"
     gene            complement(1130..1609)
                     /locus_tag="PXE50_002600"
     CDS             complement(1130..1609)
                     /locus_tag="PXE50_002600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HDL5623439.1"
                     /translation="MARVTTELNNTQIKNAKAQTKDYKLMDGKGLFLLVKKNGSKLWR
                     FRYKKPITGKESDLGIGSYPETTLAQARTIREEYRALLAENIDPLEHRQRLEAEALAE
                     IENTFYKVCLKWRDKCESRVKNGELQALTLKKNWRILEKYLLPCRLLYSKHHAKTSY"
BASE COUNT          535 a          372 c          356 g          652 t
ORIGIN      
        1 tcataataca cattaaagag gtttcaggac gatataaaaa aggctctcta aatagattag
       61 aaagccttga tattgtatgc ggttatccca tcgtggttga aaaacttaga gtaaggttct
      121 ttattatctt caacaagacg ataagcctct gatacatacc ttttacatct ttttctttgc
      181 ttattaagtt gtctatctgc cagattttta gctgttccta ttttctttaa ttcatcggaa
      241 gtcagtgatt ttaatagtat gcttaattca tcaaatataa aaaatgtatc tttattagaa
      301 taagggttat tgatatatcg taatttaaac tcagaaaggt tattcatatt tgtacacctc
      361 taattaaaca agcggtcaaa ttccgccaaa aatttactaa atccccgttg agcagctttc
      421 tacataatcc gcccattgct gcattacatc tacacgctga tctaaataat cagaacggtt
      481 ataagccttt cgggtttggt ctttgataac gtgagctaaa caagcctcta ctacatcata
      541 attgactaac tgctcattca aataggttga ggcaatagac cgcataccgt gagccgttag
      601 agtgccggca tagcctaata agcctatggc tctgttggcg gtttggctgt tcatcggttg
      661 gcgtggtttc atttcgcttt gaaaaacaaa tgggctattc cctgtgattt ttcgcattct
      721 ttctaaaatt tcgaccgctt gccgtgaaag agggataacg tgagggcgtt tcatcttcat
      781 tctttcggct gaaatggtcc acgttttcgc ctctaaatca atttcactcc acaacgtttc
      841 gcttgcctct cgtgagcgtg tcattgttaa tagttgccat ttaatcaaca tcttagtttg
      901 aaatgatagg ttgtaatcac gcaatgcagc taaaaattga ggtagctctt ttgggtgtat
      961 cgttgggtta tgttcagatt tcgctacgct aaaatttgag cctacatttt ggcatttgtt
     1021 aaactcgata acgtccgcat ttaccgcaaa attcatcact tcattaagta gcctaattgc
     1081 tcgtttaagg gtgtcgccta tgcctttttc tttagcaggc tctaaagcat taataactag
     1141 ttttggcgtg atgtttggaa tagagtagtc ggcaaggcaa aagatacttt tcaaggattc
     1201 gccaattctt cttcagcgtt aaggcttgaa gttcgccatt ttttacacgg ctttcgcatt
     1261 tatcacgcca tttcaagcag actttataaa aggtgttttc tatttcggct aacgcttcag
     1321 cctctaatct ttggcggtgt tcgagtgggt cgatattttc cgctagtaat gccctatatt
     1381 cttctctaat cgttcttgct tgggctaggg tagtttcggg gtaactgcct atgcctaaat
     1441 cgctctcttt gccggtaatc ggctttttat acctaaaccg ccataacttc gagccgtttt
     1501 tcttaaccag caaaaacagc cccttgccgt ccattagctt gtagtctttg gtttgagcct
     1561 ttgcgttttt gatttgagtg ttatttaatt ctgtggtaac tctagccata aaaatttacc
     1621 taaaatcgca ttgtgcttta tcagaatcat aagggattta agggtatggg tttcataccc
     1681 ttttacgtta taccctcaaa tataccctta aaataagggg atgtaaacgc aagaacacga
     1741 aagaatacga atgaagaaat aatttaaaat tgctctaaag ccagtatcat caatggtttt
     1801 gcgtaagaat gcgaatgaag aaataagagt ggaaaattta agttggtccc agcctcctct
     1861 gaactcgctt ataacttatt gatttataaa gagataaaat aaactctaca aaaat
//
LOCUS       DANLZQ010000183         1865 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.184, whole genome shotgun sequence.
ACCESSION   DANLZQ010000183 DANLZQ010000000
VERSION     DANLZQ010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1865)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1865)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1865
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.184"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            99..1592
                     /gene="mltF"
                     /locus_tag="PXE50_002601"
     CDS             99..1592
                     /gene="mltF"
                     /locus_tag="PXE50_002601"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     MltF"
                     /protein_id="HDL5623440.1"
                     /translation="MKGLIARLFIAVALLLWAWDMIFPWQKIIHSEANHYTQIQQSKT
                     LKVGMINHPLSYFVGPEGKSGIEYDLATAFAQYLKVNLDIKTYDSSEKLFEALRNNDV
                     DIAAAGLLYHSELNDEFQIGPSYYSASWQLVYKKGSARPYRLSDLRENVIIPAGSAVI
                     PILNQLKVDNPELKWQISDKFTQEELLLKVAQGEISHTIAMSVDISAAQHINPNLAVG
                     FDLTDENPVLWYLANSSYSELQSVLLDFMSYSMETGLISRIEEKYFNHLAKFDYVDIQ
                     SYLNAIKTILPKYEPLFRAHKGELEWQMLAAIAYQESHWDPNATSPTGVRGIMMLTKD
                     TADRMKISDRTNPAQSIKAGSEYLHMLMRQMPETIPQADRIWYSLAAYNMGLGHLLDL
                     RRLTKQLGGDPDNWLDVKKNLPLLAEKRYYANLKYGYARGYEALQYVENIRRYYGSII
                     NYQRVEEQKMQEQENLPDGQIKQENSSYEKIEEKEIPTDKEITPASN"
     gene            complement(1746..1821)
                     /locus_tag="PXE50_002602"
     tRNA            complement(1746..1821)
                     /locus_tag="PXE50_002602"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1786..1788),aa:Val,seq:tac)
BASE COUNT          613 a          291 c          376 g          585 t
ORIGIN      
        1 tattttttta ataaataatt aaactataaa gtattattcc gttaatttgt aatttcagat
       61 aggcttaatg cttagcttga aataatgagg attttaaatt gaaaggatta attgctcgcc
      121 tttttattgc cgtagcattg ttactgtggg cttgggatat gatttttcct tggcaaaaaa
      181 tcattcattc agaagcaaat cattatacac aaattcagca aagcaaaacg ttaaaggttg
      241 gaatgatcaa ccatccactt tcttactttg ttggtcctga aggaaaaagt ggcattgaat
      301 atgatttagc aacagccttt gctcaatatt taaaggtcaa tcttgatatt aaaacttatg
      361 atagtagcga gaaattgttt gaggccttaa gaaataatga tgttgatatt gctgccgctg
      421 ggctgcttta ccattctgaa ttaaacgatg aatttcagat aggtccttcc tattattcgg
      481 cttcttggca gcttgtttat aaaaagggaa gtgctagacc atatcgactt tccgatttgc
      541 gggaaaatgt gattattcca gccggttctg cggtaattcc aatattaaat cagcttaagg
      601 tggataatcc ggaactaaaa tggcagatct cggataaatt tacacaagaa gagctattgt
      661 taaaagtcgc acaaggtgaa atttcacata caattgcaat gtcggttgat atttctgctg
      721 cacagcatat taatcctaat ttagccgtag ggtttgattt aactgatgaa aacccagtgt
      781 tatggtattt agcaaatagt tcttatagtg aactgcaatc tgtgctgctg gattttatgt
      841 cttattctat ggaaactggg ctgatatcaa gaatagaaga gaaatatttt aatcatttag
      901 ctaagtttga ttatgttgat attcagagct atttgaatgc aattaaaact attttaccta
      961 aatatgaacc cctttttcgg gcacataaag gtgaattaga atggcaaatg ctggcggcta
     1021 tcgcctatca ggagtctcat tgggatccta atgcaacttc tccaaccgga gtgaggggaa
     1081 ttatgatgct gacaaaagat acggcagata gaatgaaaat ttctgatagg actaaccctg
     1141 cacaaagtat caaagcggga tctgaatatt tacatatgct aatgagacaa atgccggaaa
     1201 ctattcctca agcagataga atttggtata gcctagcagc gtataatatg ggattggggc
     1261 acttgttgga tcttcgtcga ttaacaaaac aacttggtgg tgatccggat aattggcttg
     1321 atgttaaaaa gaatctgcca ttgcttgcgg aaaaacgtta ttatgctaat ctaaaatacg
     1381 gctatgctcg aggatatgaa gcattacagt atgttgaaaa tatacggcgt tattatggta
     1441 gtattattaa ttatcaacga gttgaagagc aaaagatgca agaacaagaa aatttaccag
     1501 atggtcaaat aaaacaggag aattcttctt atgagaaaat tgaagaaaaa gaaatcccta
     1561 ctgacaagga aattacgcct gcgtcaaatt aagcaaatta aagatagaaa aagattaatt
     1621 tctgcacgta gaaaggcatt tatgcagatg caacaggcca tctgaattta ttttcccttt
     1681 ttagttatga ctttaaaggg gttattagat tatgatataa gttttaggct ttgatactaa
     1741 atagatggtg ggcgataccg gtctcgaacc agtgaccccc tccttgtaag ggaggtgctc
     1801 tcccaactga gctaatcgcc cttcagatac gaaaaatcgc catttgaagt ttatgatttt
     1861 agtct
//
LOCUS       DANLZQ010000184         1803 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.185, whole genome shotgun sequence.
ACCESSION   DANLZQ010000184 DANLZQ010000000
VERSION     DANLZQ010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1803)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1803)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1803
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.185"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(32..383)
                     /locus_tag="PXE50_002603"
                     /pseudo
     CDS             complement(32..383)
                     /locus_tag="PXE50_002603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596652.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(380..622)
                     /locus_tag="PXE50_002604"
     CDS             complement(380..622)
                     /locus_tag="PXE50_002604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012341694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5623441.1"
                     /translation="MYGINLNLNEKSSQTQNARILAHLQNGGRITSLSALDDFGCLRL
                     SARIKDLRDRGHDIQSVFITVPNGKKVKQYFMECAK"
     gene            complement(779..1012)
                     /locus_tag="PXE50_002605"
     CDS             complement(779..1012)
                     /locus_tag="PXE50_002605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005714943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cro/Cl family transcriptional regulator"
                     /protein_id="HDL5623442.1"
                     /translation="MEELKAYLNSLTTKEQESFALRCNTTVGYLRKSISRNSRLGAEI
                     CVAIERETKGLVTRKHLIEDWHLRWPELANDKQ"
     gene            1141..>1803
                     /locus_tag="PXE50_002606"
     CDS             1141..>1803
                     /locus_tag="PXE50_002606"
                     /inference="COORDINATES: protein motif:HMM:NF012920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5623443.1"
                     /translation="MNELRLLRQKKLKRLIDEVSEGNIADFARKIGKEPSYVARMLYP
                     SDKAGAKPIGEKMALHICHKFVLPLDWFNRDDDGEFIQINNGEEDNIILSVLNIQASA
                     GIGAKNGDVMEVIREIKFNPEQFYNLFRGITPEHIELISVKGDSMEPTFSHGDLLFVD
                     VTIQEYDGDGVYVFTCDDYIFVKRIQKTGRHFTILSDNDRYKPWQLDQEIYIHGKVKV
                     HQS"
BASE COUNT          574 a          332 c          327 g          570 t
ORIGIN      
        1 aaatccgagc tttttcggat ctgtttccga gctaactcgg atttatttcc gagtgtcgga
       61 tttaaatccg agttaaactc attccaagtc ttcccttttt cagttaatcg aataaggtct
      121 ttatctccgt gtttttgata cacgatcaac ccttttttgt gaaactcgac aaaatggcga
      181 tagacggtat caggctttga gtaaaacaaa ggtagttctt cgatcaccgc attacgggaa
      241 acccagtaat aaaccacgcc atcaataatg atttctttcg cccaagcagg agcttgattc
      301 agtaaatcaa ataatgctcc ttgattagca tttaagttcc attcaaggca ttttgcattg
      361 ttgatgtaag tgctaaatct catttcgcac actccataaa atactgcttc actttcttgc
      421 cattcggcac tgtaataaat acgctttgaa tatcgtgacc acggtcacgc aaatctttaa
      481 tgcgagcgga taaacgcaag cagccgaaat cgtctaacgc agaaagcgaa gtaatacgac
      541 cgccattttg aagatgtgcc aaaattcttg cattttgggt ttgacttgat ttttcgttta
      601 ggttaagatt tatcccatac atataggaaa cctccttagt aattagccac cgttacagcg
      661 gtggtttttt taattgttaa aaacccacca cgcaagcagc ataaaaattg ccactctaat
      721 aaaaattgaa tttttactgt ggtagaatga tttgagtttt ttagaaaaaa ctttcccttt
      781 attgcttgtc atttgccaat tccggccagc gtaagtgcca atcttcaatt aaatgctttc
      841 tagtaactaa accttttgtt tcacgctcta tcgcaacgca aatttccgca cctaatcgag
      901 aatttcttga gatcgatttt cttaaatacc caactgtcgt attacaacgc aaggcaaaac
      961 tctcttgctc ttttgtggtt aaagaattga ggtatgcttt taattcttcc attgtgagtc
     1021 ctcttttaaa aacgccaaaa taataccatt aggtaaaaat aatatcaata ccatttggtt
     1081 tgtttacctt ttagtaaata agagtacaat tactaaaaag taatccttag aggaggttat
     1141 atgaatgagt tgagacttct tagacaaaaa aaattgaaac gcctaattga tgaagtgagt
     1201 gagggaaata ttgctgactt tgcaagaaaa ataggtaaag agcctagcta tgtagcaaga
     1261 atgttgtatc cgtccgataa agctggagct aagcctattg gtgaaaaaat ggcactccat
     1321 atttgccata aatttgtgct accccttgat tggtttaatc gagatgatga cggcgaattt
     1381 attcaaatca acaatggtga ggaagataat atcatcttaa gtgtattgaa tattcaagca
     1441 tcggccggta taggagcaaa aaacggtgat gtgatggaag tcattagaga aattaaattc
     1501 aatccagaac aattttataa cctatttaga ggtattacgc ctgaacatat cgagctgatc
     1561 agtgtaaaag gcgattctat ggagccaaca ttctcacacg gtgatttgct ttttgttgat
     1621 gtaactatcc aagaatacga tggcgatggt gtgtatgttt ttacttgcga tgactatatt
     1681 tttgtaaaaa ggattcaaaa aacaggcaga cactttacta ttttatctga taatgaccgc
     1741 tataaacctt ggcaattaga tcaagaaatt tatattcacg gcaaagttaa agtccaccaa
     1801 agc
//
LOCUS       DANLZQ010000185         1776 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.186, whole genome shotgun sequence.
ACCESSION   DANLZQ010000185 DANLZQ010000000
VERSION     DANLZQ010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1776)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1776)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1776
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.186"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..1548
                     /locus_tag="PXE50_002607"
     CDS             <1..1548
                     /locus_tag="PXE50_002607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HDL5623444.1"
                     /translation="KDLIKGYSNIQGNLVTAIPNFLEKVNNDFAISARNRDLYSHYLP
                     YQGIDDWENSNFNFRTLNGVYYDDNLTSTELLRKFMIQRDYNTLYALSSARTGNADSL
                     AKNYHLVVAKMSYENLKKELSKKPDSTFNKLKKLYETNGEFLNEYILDNFRGNPLELL
                     TVPALKESLENQESFPSRLYQKFNIFNQAIAQTTSNITKEEIDDLEKTVENFNNFKNS
                     IDYDSDAWIFNKEEYRTYMNDNVIPFMEKVEEFTETLKTLSRDDLSAEERTTKTIDSV
                     KLRIYLNEQARNRKNYINGFVPTDWIPEITDQMTKSKNLWLKYEEEAKTTLKPYQEET
                     ISRVIQDEINKKMAEIGTTTLEIGGKEHELEDLENQINALALTDEEKLAEDVENDLIS
                     KLDEAKAALAKNQQTLKEKRDELLGLNNKLDSSPLVKKGKNALAEGTNAFASGENAIA
                     FGTDSQATGNNAIALGANSKANAESAIAIGKGAQALKEKALALGENAIANRASAIAIG
                     DNHSSKL"
     gene            complement(1597..>1776)
                     /locus_tag="PXE50_002608"
     CDS             complement(1597..>1776)
                     /locus_tag="PXE50_002608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS481 family transposase"
                     /protein_id="HDL5623445.1"
                     /translation="RKKIYTDLTTLQADLDEWLMYYNHHRTHQGKMCCGRTPMATLLD
                     GKRIWVEKEFKLKLI"
BASE COUNT          670 a          305 c          303 g          498 t
ORIGIN      
        1 aaagatctca ttaaaggtta tagcaatatt caaggtaact tagtaacagc cattcctaac
       61 ttcctggaga aagttaataa tgattttgct ataagtgcta gaaatagaga cttatatagt
      121 cactaccttc cttatcaggg tattgatgat tgggagaatt ctaattttaa ctttcgaaca
      181 ctaaatggag tttattatga tgataatcta acttcaacag aactcctgcg aaaatttatg
      241 attcaaagag attataacac tctttatgct ctaagttctg ctcgcacagg aaatgctgat
      301 agtctggcta aaaattacca tcttgtagtt gcgaaaatgt cctatgaaaa cctgaaaaaa
      361 gaattatcca agaaacccga ctctacattt aataaactga aaaagctgta tgaaaccaat
      421 ggtgaattct taaatgaata tattttagac aatttccgag gaaatccact tgaattatta
      481 acagtacctg cgcttaaaga aagtttagaa aaccaagagt cattccctag caggctgtat
      541 cagaaattta atattttcaa ccaggctatt gcacagacca catcaaacat tactaaagaa
      601 gaaattgatg atttagaaaa aactgtagaa aatttcaata acttcaaaaa ttcaattgat
      661 tatgatagcg atgcgtggat ctttaataaa gaagaatatc gcacttatat gaatgataat
      721 gtaattcctt ttatggagaa ggtagaggaa tttactgaaa cattaaaaac tttatctaga
      781 gatgacttaa gtgcagagga acgtacaacc aaaacaattg actccgttaa attaagaata
      841 tatctcaatg aacaagcacg aaatcgtaaa aattatatta atggatttgt acctaccgat
      901 tggattcctg aaattacaga tcaaatgaca aaatccaaaa atctatggtt aaaatatgaa
      961 gaggaagcca aaacaacatt aaaaccatac caagaagaaa caatatctag ggttatacaa
     1021 gatgaaatta ataaaaaaat ggctgaaata ggtactacaa cactagagat tggtggtaaa
     1081 gaacacgagc tcgaggatct tgaaaaccaa attaatgctt tagctttaac tgatgaagaa
     1141 aaacttgcgg aagatgtgga aaatgattta atctcaaagc ttgatgaggc taaagcagcc
     1201 ttagcaaaaa accagcaaac gctcaaagaa aagcgtgatg aattactagg gctaaataac
     1261 aaattagata gctcaccact tgttaaaaaa ggtaaaaatg cacttgcaga aggcacgaat
     1321 gcctttgctt ctggtgaaaa tgccatcgca ttcggcacgg attcacaagc tacaggtaat
     1381 aacgctatcg cactaggtgc aaattcaaaa gcaaacgcag aaagtgcgat tgcaattggt
     1441 aaaggtgcac aagcattaaa agaaaaagcc cttgctttag gcgaaaatgc cattgccaac
     1501 agagcatctg ctattgcgat tggtgataac cattcatcta aattgtagaa gatcaaacct
     1561 aatctgacag tcccccgttt taaattaccg tgtctgtcag attaatttga gcttaaattc
     1621 tttttccacc caaatccgtt ttccatcaag taaggttgcc atcggtgttc tgccacagca
     1681 catttttcct tgatgtgttc gatggtgatt ataatacatt aaccactcat ctaaatccgc
     1741 ttgtaatgtc gttaaatccg tataaatttt cttcct
//
LOCUS       DANLZQ010000186         1739 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.187, whole genome shotgun sequence.
ACCESSION   DANLZQ010000186 DANLZQ010000000
VERSION     DANLZQ010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1739)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1739)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.187"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(25..1564)
                     /locus_tag="PXE50_002609"
     rRNA            complement(25..1564)
                     /locus_tag="PXE50_002609"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          408 a          523 c          347 g          461 t
ORIGIN      
        1 acttgctgtc gttctcgatt ttggtaagga ggtgatccaa ccgcaggttc ccctacggtt
       61 accttgttac gacttcaccc cagtcatgaa tcataccgtg gtaaacgccc ccctttcggt
      121 taagctatct acttctggta caacccactc ccatggtgtg acgggcggtg tgtacaaggc
      181 ccgggaacgt attcaccgca acattctgat ttgcgattac tagcgattcc gacttcatgg
      241 agtcgagttg cagactccaa tccggactta gacgtacttt ctgagattcg ctccccatcg
      301 ctggctcgcc gccctctgta tacgccattg tagcacgtgt gtagccctac tcgtaagggc
      361 catgatgact tgacgtcatc cccaccttcc tccggtttat caccggcagt ctcctttgag
      421 ttcccgacct aatcgctggc aacaaaggat aagggttgcg ctcgttgcgg gacttaaccc
      481 aacatttcac aacacgagct gacgacagcc atgcagcacc tgtctcatgg ttcccgaagg
      541 cactctcata tctctacaag attccatgga tgtcaagagt aggtaaggtt cttcgcgttg
      601 catcgaatta aaccacatgc tccaccgctt gtgcgggccc ccgtcaattc atttgagttt
      661 taaccttgcg gccgtactcc ccaggcggtc gatttatcac gttagctacg ggcaccagag
      721 ttaaacccca atccccaaat cgacagcgtt tacggcgtgg actaccaggg tatctaatcc
      781 tgtttgctcc ccacgctttc gcacatgagc gtcagtacat tcccaagggg ctgccttcgc
      841 cttcggtatt cctccacatc tctacgcatt tcaccgctac acgtggaatt ctacccctcc
      901 ctaaagtact ctagttgtcc agtctgaaat gcaattccca ggttaagccc ggggctttca
      961 cacctcactt aaacaaccgc ctgcgtgccc tttacgccca gttattccga ttaacgctcg
     1021 caccccccgt attaccgcgg ctgctggcac ggagttagcc ggtgcttctt ctgtgattaa
     1081 cgtcaatcga ctgttctatt aaaacaatcg ccttcctcgt caccgaaaga actttacaac
     1141 ccgaaggcct tcttcattca cgcggcatgg ctgcatcagg gttcccccca ttgtgcaata
     1201 ttccccactg ctgcctcccg taggagtctg gaccgtgtct cagttccagt gtggctggtc
     1261 atcctctcag accagctaga gatcgcgggc ttggtgagcc tttacctcac caactaccta
     1321 atcccacttg ggctcatctt atggcaggtg gccaaatggt cccacccttt agtcctaaga
     1381 cattacgcgg tattagctac cgtttccagt agttatcccc ctccataagc cagattccca
     1441 agcattactc acccgtccgc cactcgtcac ccaaggagca aactcctatg tgctaccgtt
     1501 cgacttgcat gtgttaagcc tgccgccagc gttcaatctg agccatgatc aaactcttca
     1561 attcaaaaag tttaatcgct caatactgct gacataaaat cgcacttcca aatttaaacc
     1621 taattaaaat taagttaaaa gaaagtaatg aatttctagt tagcacctat taagacttca
     1681 aaattaaaaa aatgtttttc aatcaagtca atcaacaagt gcccacacag attgtctga
//
LOCUS       DANLZQ010000187         1718 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.188, whole genome shotgun sequence.
ACCESSION   DANLZQ010000187 DANLZQ010000000
VERSION     DANLZQ010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1718)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1718)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1718
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.188"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..704
                     /locus_tag="PXE50_002610"
     CDS             <1..704
                     /locus_tag="PXE50_002610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HDL5623446.1"
                     /translation="QIDNIIEAYNLSNTSLYGYSYYDCDSSRGLAEYNKGRFLKLRDD
                     FNAKVLAGEIDYPMLYVLMVFSFNNQIRFNRKGLFNLPVGKRDFNSKMRSKLVLFSEE
                     LKSKDVQFMKKDYREISLDDFSQETFIYCDPPYLITNATYNEHGMWTEIEEKALLEFL
                     DEANEKGFSFALSNVLESKNKRNDILYNWIESKGYYCNYLNKSYSNSNYHRKDKVSIS
                     EEVLITNYPVNWRNK"
     gene            705..>1718
                     /locus_tag="PXE50_002611"
     CDS             705..>1718
                     /locus_tag="PXE50_002611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlwI family type II restriction endonuclease"
                     /protein_id="HDL5623447.1"
                     /translation="MSNKSIPYQSFCWVIGTTSFRTAKLNLKIEAQLLLLDEFFNEVI
                     KESSWNWNNELQEKYYDFMKDRAFLTGEAKRKDKDAREKTSGLVDIGLITEDRLITDA
                     GRELLKVTSSGDFETNNVFNINRDSFIYLKQLLKTSIDVSGSIVRPFIAVVKCLTELE
                     FLSYDEFTYFVPLIRDDESAKQIISDIKLYREGKILPEEIIYKRLMQMENYKLAQEEF
                     IASDVDENLICLVGMNRKSRNYDKPYYKLYENLKKVFLDGENIYESLLNSAKNINQKP
                     GILWRSLLFKTTNIGVVRKNGKSSIHKQCPFINCKNETELKEVFFKYLHVFKAMATLS
                     DYFD"
BASE COUNT          660 a          183 c          320 g          555 t
ORIGIN      
        1 aacaaataga caatattatt gaggcgtata atttatccaa tacatcatta tatgggtatt
       61 cttattatga ttgtgatagt agtagaggct tagccgaata caataaagga agatttctca
      121 agttaagaga tgattttaac gctaaagttc ttgctggaga aatagattat ccaatgcttt
      181 atgtacttat ggtgttctct tttaataatc agattaggtt taatagaaag ggacttttta
      241 atcttccggt aggtaagaga gattttaatt ccaaaatgag aagtaaactt gtattatttt
      301 ctgaagaatt aaaaagtaaa gatgtccagt ttatgaaaaa ggattataga gaaatttcgt
      361 tagatgattt ttctcaggag acttttattt attgtgatcc accttatttg attacaaatg
      421 caacatataa tgaacatgga atgtggactg aaatagaaga aaaagcttta cttgaatttt
      481 tggacgaagc caatgaaaaa ggttttagtt ttgctttgtc taatgttttg gaaagtaaaa
      541 ataaaagaaa tgatatttta tataattgga ttgaaagcaa aggatattat tgcaattact
      601 taaataaaag ttattcaaat agtaactatc atagaaaaga taaagtcagt atatctgaag
      661 aagttttaat tactaactat cctgtgaatt ggaggaataa gtaaatgtct aataaaagta
      721 ttccatatca aagtttttgt tgggttatag gaactacaag ttttagaact gcaaaactaa
      781 atttaaaaat cgaggcacag ttgttgcttc ttgatgagtt ttttaatgag gtcataaagg
      841 aatcaagttg gaactggaac aatgaattgc aagaaaaata ttatgatttt atgaaagata
      901 gagctttcct aacaggagaa gcaaaaagaa aagacaaaga tgccagagaa aaaacatcag
      961 gattggttga tattggttta attacagaag atagattgat tacggatgca ggaagagaac
     1021 tccttaaagt aacaagtagt ggggattttg aaaccaataa tgtgtttaat attaatagag
     1081 atagctttat ctatctaaaa cagcttctta aaacgagtat agatgtaagt ggtagtatcg
     1141 ttagaccgtt tattgcggtt gtaaagtgcc tgacggaact tgagttttta agttatgacg
     1201 agtttactta ttttgttccg ctaattagag atgacgaaag tgcaaaacaa atcatatcgg
     1261 atattaaatt atatcgagaa ggtaaaattt taccggaaga aataatttat aagaggctta
     1321 tgcaaatgga aaactacaaa cttgcacaag aagaatttat agcctctgat gttgatgaaa
     1381 atctaatatg tttagtggga atgaatcgta aaagcagaaa ctatgacaag ccgtactata
     1441 aattgtatga gaatttaaag aaggtatttc ttgatggcga aaacatttat gaatcgctat
     1501 taaattctgc aaagaatata aatcaaaaac ctggaatatt gtggagaagt ttactcttta
     1561 aaacaaccaa tattggtgtt gtaagaaaaa atgggaagtc ttcaattcac aaacaatgcc
     1621 catttataaa ctgtaaaaat gaaacagaac taaaagaagt gtttttcaaa tatttacatg
     1681 tttttaaagc aatggcgact ttatctgatt attttgat
//
LOCUS       DANLZQ010000188         1678 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.189, whole genome shotgun sequence.
ACCESSION   DANLZQ010000188 DANLZQ010000000
VERSION     DANLZQ010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1678)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1678)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1678
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.189"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            65..>1678
                     /locus_tag="PXE50_002612"
     CDS             65..>1678
                     /locus_tag="PXE50_002612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exo-alpha-sialidase"
                     /protein_id="HDL5623448.1"
                     /translation="MEKMMRKINQLIISPYFFLSILSASANSDFWKSDLNFNLTNITK
                     RVGVDNFTTPVAGEPWAGIGPNGEAAGTAPLYYSRIPAMQVTEDNKLVVMFDLRWNRA
                     YDQDRIDPGIAISSDGGHTWTKKTAWSFDRTNHPARRSMDPTLLHNPIDNSLYVMHGT
                     WSMSDQQWYGGRVPHFNSGSWAATIYKSTDGGLNWEKNTEFSKFSNLDVFSKVTKNGK
                     PTLGFLGGVGSGIVMQDGTLVFPIQTAHQNGIATTIMYSKDNGKTWEMPEIDNPVAPN
                     QSSLENMVFELEPGKLVMTGRGNSRWAYSSTDMGKTWELFTPTNGLLPTSSQPTQGSS
                     IYVTLPNGRKVLLISKPDGKNDGWKRGDITLWMLDAKDPSHKHKVHIIRPGSGNAAGA
                     GYSSLAYKEGNLFVAFENDGDISVKNLTEHIAEMEAKAIEWGLPDELTPALDKINALP
                     YLNKAQKETLVEKMRRANDTAIAQSFVINKEMYNLKNNSDELDKLAKNITKALPSQQN
                     IYQRALAYVNKVTNTADTTYLNYNGIMDTY"
BASE COUNT          540 a          308 c          338 g          492 t
ORIGIN      
        1 acataagatt gaaccatata atagctgttc agctaaaaat tagtctttgc actttatccc
       61 cctaatggag aaaatgatga gaaaaatcaa tcagttaatc atatccccat actttttcct
      121 aagtatttta tctgcttccg ctaactctga tttttggaaa agcgacctta attttaatct
      181 cacaaatatt accaagcgtg tcggagtcga taactttacc actccagtag ctggcgagcc
      241 ttgggctggt attggtccaa atggtgaagc tgcaggtact gcgccattat attatagccg
      301 tattccagct atgcaagtta ccgaagataa caaattagtt gttatgtttg atttacgctg
      361 gaatcgtgcg tatgaccaag atcgtattga tcctggtatt gcgatttctt ccgatggtgg
      421 ccatacttgg acgaagaaaa ccgcttggtc ttttgataga actaatcacc cagcacgccg
      481 ttcaatggat ccaacgctat tacataatcc tattgataat agtttatatg taatgcacgg
      541 aacttggtct atgtcggatc aacaatggta tggtgggcgt gttcctcact ttaatagtgg
      601 cagctgggca gctaccattt ataaatctac tgatggtggt ttaaattggg agaaaaatac
      661 tgagtttagt aaattcagca atttagacgt attttctaaa gtcaccaaaa atggaaaacc
      721 taccttaggc tttttaggcg gggtcggatc tggaattgta atgcaagatg gtacgttggt
      781 tttcccaatt caaaccgcac atcaaaatgg tattgcgacc actattatgt attctaagga
      841 taatgggaaa acttgggaaa tgccagaaat tgacaaccca gttgcaccga accaaagttc
      901 tttagaaaat atggtgtttg aactcgaacc gggtaagcta gtgatgactg gacgaggaaa
      961 cagtcgctgg gcatactctt ctactgatat gggtaagacc tgggaattat ttactccaac
     1021 taatggatta ttaccaacta gctcacaacc aactcaaggc tcttctatct atgtaacact
     1081 accaaatggt cgaaaagtgc tactaatctc taaaccagat ggaaagaatg atgggtggaa
     1141 aaggggtgat attacacttt ggatgctaga tgcaaaagat ccatcgcaca aacacaaggt
     1201 gcatattatt cgtccaggtt caggtaatgc cgctggtgct ggttattcct ctttagccta
     1261 taaagaaggg aatttatttg ttgcttttga aaacgatggt gatatttcag taaaaaattt
     1321 aactgaacat attgctgaaa tggaagcaaa agctatcgaa tggggattac cagatgaact
     1381 tactcctgct ttggataaaa tcaatgcact gccttatctc aataaagctc aaaaagagac
     1441 gctagtcgaa aaaatgcgtc gtgctaatga tactgcgatt gcacaatctt ttgtgattaa
     1501 caaagaaatg tataatctga aaaacaatag tgatgagctg gataaattgg caaaaaatat
     1561 tactaaagca ctgccgtctc aacagaatat ttatcaaaga gccttagcct atgtgaataa
     1621 agtcaccaat acagcggata ccacttattt aaattataat ggtattatgg atacctat
//
LOCUS       DANLZQ010000189         1552 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.190, whole genome shotgun sequence.
ACCESSION   DANLZQ010000189 DANLZQ010000000
VERSION     DANLZQ010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1552)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1552)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1552
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.190"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            292..>1552
                     /locus_tag="PXE50_002613"
     CDS             292..>1552
                     /locus_tag="PXE50_002613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase
                     domain-containing protein"
                     /protein_id="HDL5623449.1"
                     /translation="MDISWYKPRNYLHFDSPITLQQAIKLVANPNNVVKHSFYPFLSY
                     TLSVAKIKKDKNEGKLVRLIKNRGISYSSHKDSHIFSYYAYLLNEKYENLLKNKYYIL
                     DDSILAFRKLNKSNIDFARIAFDSIRSAQNCTVLGLDISKFFDHIDHKILKDMWCKVL
                     GVPSLPEDHHSVFKAITKFVKVDRDTVFEFFNISLHNPRKNGKNRICSPREFREYRKL
                     KKPDLFNDNPAFFINKGQKGIPQGSPISALLSNIYMLEFDVLVKEKIMECKGSYFRYC
                     DDILCIIPNEYEEFILDYITGEIKSKLKLEINKDKTEVVKFQYCNRTKKIINEKKLQY
                     LGFILHNNSISIRSSAFTRYSNKMKRGVSLAKQTQGKYNRIRIRRGVAIKGIYKRKLF
                     SKYSHFGKSNFISYGKRAYSSMDSKVIK"
BASE COUNT          575 a          195 c          252 g          530 t
ORIGIN      
        1 tcaatttgtg gataaggtaa tcaacagtat gtcaatagtt gataacattt cataaagcgt
       61 ttcagctact gaacataaac taataaagaa tttgataatg attattgtca tattagattc
      121 cttgtgagtt ataatagttg attgattatt ataatatata tttagcagat agcggtttat
      181 tcgacgggta tcctaaggta cctaggctat ataaagactg ttaactattc aaatagttag
      241 ggacaaccgc aatccttagt ctttagtttt gctttcatta aattttctat tatggatata
      301 tcttggtata agcctcgtaa ttacttacat ttcgattcac ccataactct tcaacaagca
      361 attaaattag tcgctaatcc aaataatgta gtaaaacata gtttctaccc attcttatct
      421 tatacactat ctgtggctaa aataaaaaag gataaaaatg aaggtaaatt agtacgttta
      481 ataaaaaata gaggaatatc ttattcatct cataaagata gccatatttt tagttattat
      541 gcatatttat taaatgaaaa gtatgaaaat cttttgaaaa ataagtacta tattttagat
      601 gattctatat tagcatttag aaaactaaat aaaagcaata ttgattttgc cagaatcgct
      661 tttgatagta ttcgaagcgc tcaaaattgc acggttttag ggctagatat atctaagttc
      721 tttgaccata tagaccataa aattctgaaa gatatgtggt gtaaagtttt gggtgtacct
      781 agtttacctg aagaccatca ttctgtattt aaggctatta ctaaattcgt aaaagtagat
      841 agagatactg tatttgaatt ctttaatatc tcccttcata atcctaggaa aaatgggaag
      901 aatagaattt gtagccctcg ggaatttcga gaatatagga aattaaagaa acctgactta
      961 tttaatgata atccagcttt ttttattaat aaaggccaga aagggattcc tcaaggttct
     1021 ccaataagtg cattgttatc caatatctat atgttagagt ttgatgtgtt agttaaagaa
     1081 aagattatgg agtgcaaagg gagttatttt cgttattgtg atgacattct atgtatcatt
     1141 cctaatgaat acgaagaatt tattctcgat tacatcactg gggagataaa aagtaaatta
     1201 aaactagaga taaataagga taaaactgag gttgttaaat tccaatattg taatagaaca
     1261 aaaaaaataa ttaatgaaaa gaagttacaa tatcttggtt ttatattgca taataactct
     1321 attagtatta gatcatcggc atttacacga tattcaaata aaatgaaacg aggggttagt
     1381 ctagctaagc aaactcaggg taaatataat aggataagaa taagacgagg ggtagctatc
     1441 aaaggcattt ataaaagaaa gctattttct aagtattctc atttcggaaa atctaatttt
     1501 atctcttatg gaaagagagc ttattcatct atggattcca aagttataaa ga
//
LOCUS       DANLZQ010000190         1352 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.191, whole genome shotgun sequence.
ACCESSION   DANLZQ010000190 DANLZQ010000000
VERSION     DANLZQ010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1352)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1352)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1352
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.191"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            322..576
                     /locus_tag="PXE50_002614"
     CDS             322..576
                     /locus_tag="PXE50_002614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623450.1"
                     /translation="MICHADPEYVKYNYAGLWEKGSDGTFFCNYQQFMPEVEAKESLR
                     KQEPELDDRYNEEEYSEEEYPDENDASDENDNYDETYNVF"
     gene            776..952
                     /locus_tag="PXE50_002615"
     CDS             776..952
                     /locus_tag="PXE50_002615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623451.1"
                     /translation="MATSSFDKRFVVKDPKAVKVLIEALQSPIKVVLPKKDLEKEEKE
                     ALCAIKKRLASMGL"
     gene            913..>1352
                     /locus_tag="PXE50_002616"
     CDS             913..>1352
                     /locus_tag="PXE50_002616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623452.1"
                     /translation="MCNQKTLSLYGLVKELGIEKTQLFLEQAFSCSRNKDVESFLLNK
                     AIRFETALAAATHLIINEQGDILAYFTLSFKEIEVEVSKSQLKKLTAGLSNDSHLRVL
                     LIGQIGKNEKVIDNPAKLPDILNHIYAQLYKAQRVLGGRVVILE"
BASE COUNT          496 a          237 c          233 g          386 t
ORIGIN      
        1 ccgctactca acatacaggg atggttatct tgataacgct cacgatactc ttgagcaata
       61 gctagtaatt gctgattagt catataaagt ctccaataac ataataaacc tgaaaacgtt
      121 cttagtattc tggcaacatt tttataaata gaaaccaaaa actatattca aatcattttt
      181 agtttctgct caacattcct atgtttttcc atacactgaa gtaaatttac ctaaccctat
      241 tttgctgtga aaccaaaact cctcacgctt atccttagta gcatttcgat gtcgctcact
      301 tatgccaccc ctcaattagg gatgatatgc cacgctgatc ctgaatatgt aaaatacaac
      361 tacgccggac tttgggaaaa aggcagcgat ggcacttttt tctgcaatta ccagcaattt
      421 atgcctgaag ttgaagctaa agaatcacta aggaaacaag aaccagaact tgatgataga
      481 tataacgaag aggaatatag cgaagaagaa tatcctgatg aaaatgatgc cagcgatgaa
      541 aacgataact acgatgaaac ttataatgtt ttctagtatg tatatggaaa ccggaggaat
      601 ccgtgattga aaaggcttgc atttccaaat atagtctata tattgtggta attgaaagta
      661 tttctatgct aacaagcata aggctatgta atcgaaaacc acccacaagg cctaaataca
      721 gtattattac agccatgagt aaccatggta atttaaatat ttaaggagtt ctataatggc
      781 aacatcatca tttgataaac gctttgtagt caaagatcca aaagctgtca aggtattaat
      841 tgaggcatta caaagcccaa tcaaagtagt tttacctaaa aaagacttag aaaaagaaga
      901 gaaagaagca ctatgtgcaa tcaaaaaacg cttagcctct atgggcttgt aaaagaacta
      961 ggtattgaaa aaacacaact ctttttggag caagcatttt cttgcagtag aaataaagat
     1021 gttgaaagtt ttctacttaa taaagcaatc agatttgaaa ccgcattagc agcagcaaca
     1081 catttaatca ttaatgaaca gggcgatatt ttggcttact ttaccctctc ttttaaagaa
     1141 attgaggtgg aagtaagcaa aagccaatta aaaaagctaa ctgctggttt aagtaatgat
     1201 tcacatttaa gagtattgct tatcggtcaa atcggcaaaa atgaaaaagt aattgacaat
     1261 ccagccaaat tgccagatat tctaaatcat atctatgcac aactttataa agcacaacga
     1321 gttttaggtg ggcgagtcgt tatattagaa tg
//
LOCUS       DANLZQ010000191         1248 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.192, whole genome shotgun sequence.
ACCESSION   DANLZQ010000191 DANLZQ010000000
VERSION     DANLZQ010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1248)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1248)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1248
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.192"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            115..1167
                     /locus_tag="PXE50_002617"
     CDS             115..1167
                     /locus_tag="PXE50_002617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623453.1"
                     /translation="MKFNKKLILTFAATLVLSACGGSGSGGSSSTPNHPKPVLVPKTQ
                     NNLQAQNVPQAQNASQAQNAPQAQNAPQAQNAPQVENAPQVENAPQAEVTPPVPQPQS
                     QKIDGSFDKIGSVKLNKEAQTLELSRFTLVDKLGTPPKFDKVSGKKIIEEKDFLVLNL
                     SDINAEQLSGDFLIRRSDDLFYGYYHDTNGKNLVDAADKFSQYFVVYDEKRVNDNISD
                     KLTATYRKKEGFVYGSNPHTKEFAARISKLGDVEIKFENGQAQGSIKDEKDGNAEIFT
                     IKGDTKQLEITPTESNRIIIAILDQNQKSYTPGMEKAIMETKFIDSKAGNSDQKYLIG
                     EAKSDNWQAIMVSEKK"
BASE COUNT          465 a          222 c          225 g          336 t
ORIGIN      
        1 attttcataa gggaaacgtt tacgtaaaac tcctcagacc actcattctt attttatata
       61 aaaaatgtga tagacttctc gcagtttcgt tttatatatt taaggaataa ctaagtgaaa
      121 ttcaataaaa aattaatttt aacatttgct gcaaccttag ttttaagtgc ttgcggagga
      181 agcggtagcg gaggttcgtc ttcaacaccg aatcacccca aaccagtact agtaccaaaa
      241 acacaaaata atcttcaagc acaaaatgtt cctcaggcac aaaatgcctc tcaggcacaa
      301 aatgcccctc aggcacaaaa tgctcctcag gcacaaaatg ctcctcaggt ggaaaatgct
      361 cctcaggtag aaaatgctcc tcaagcagag gttactccgc ctgtaccaca gccacaatca
      421 caaaaaattg acggttcttt tgataaaatt ggttcagtaa aactcaataa agaggctcaa
      481 actcttgagc ttagtagatt cactttggtg gataaattag gcacaccacc gaagtttgat
      541 aaagtaagcg gtaaaaaaat tattgaagaa aaagattttc tcgtattaaa tttgtctgat
      601 attaatgctg aacaactctc tggcgatttt cttattcgcc gtagcgatga tctattctat
      661 ggctactatc acgatacaaa tggcaaaaat cttgtcgatg ctgccgataa attcagtcaa
      721 tattttgtcg tgtatgatga gaaacgggta aatgataata tctctgataa attaacagca
      781 acttaccgta aaaaagaagg ctttgtatat ggttcaaatc cacatactaa agaatttgcc
      841 gcacggatca gcaaattggg ggatgtagaa attaaatttg aaaatggtca agctcaagga
      901 agtataaaag acgaaaaaga tggaaatgct gagatcttta ctattaaagg tgatacaaaa
      961 cagttagaga ttaccccaac ggaaagtaac cgaatcatta tagcaatttt agaccaaaat
     1021 caaaaaagct atactccagg aatggaaaaa gcaattatgg aaactaagtt tattgattca
     1081 aaggctggta attccgacca aaaatactta atcggtgaag caaaaagcga taactggcaa
     1141 gcaataatgg ttagcgagaa aaaataaagt tatcttttgc taaaaactga aataaaaagg
     1201 ctgagtccgg gtaatatcgg cctcagtctt ttaaattgta gaaaatca
//
LOCUS       DANLZQ010000192         1209 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.193, whole genome shotgun sequence.
ACCESSION   DANLZQ010000192 DANLZQ010000000
VERSION     DANLZQ010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1209)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1209)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1209
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.193"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(11..214)
                     /locus_tag="PXE50_002618"
     CDS             complement(11..214)
                     /locus_tag="PXE50_002618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623454.1"
                     /translation="MTDTERLDFIAQRKLDVRYSDLVDEFIIASYTKPHEQYFHWARN
                     ADLRTAIDEAMKEMRGLNNATTN"
     gene            complement(211..702)
                     /locus_tag="PXE50_002619"
     CDS             complement(211..702)
                     /locus_tag="PXE50_002619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF551 domain-containing protein"
                     /protein_id="HDL5623455.1"
                     /translation="MNEDKFFSVDVSNDIHILNLHETLEQAKQSCLNGATEAYEFADD
                     MDDHESYEAYDLPYAVYGVVLGRAKSDIRPLTDEERESELFGEAEQVIEPPTLVENNG
                     WISVKDRLPEIRKEVLITNNFIMIAQFNGESWFKPGGFLGIQPVYGVTHWQPLPEPPK
                     EEK"
     gene            complement(747..1199)
                     /locus_tag="PXE50_002620"
     CDS             complement(747..1199)
                     /locus_tag="PXE50_002620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HDL5623456.1"
                     /translation="MKPFDLNKALAGEPVKLRNNDKAFVKYLISDDYIRDNKDHQVQG
                     YTVDEENVFLSEVSWAVSGSHFNDGTIAQYDIVGMWEEPRPTVTLTLPCPLKEPRDGM
                     WFIGDNFNVIKSNFPTHSYIEKLFDQGLYFASAEDAGAWLDALKNSMR"
BASE COUNT          329 a          252 c          203 g          425 t
ORIGIN      
        1 ttcgatgttt ttaattagtt gttgcattgt ttagtcctct catttctttc attgcttcat
       61 caatcgccgt gcgtaaatcg gcatttcttg cccaatgaaa atactgctcg tgcggtttgg
      121 tatagctagc aataataaat tcgtccacca aatcagaata tcggacatct aatttgcgtt
      181 gggcgataaa gtctaagcgt tcggtgtcgg tcatttttcc tcctttggtg gttcgggaag
      241 tggttgccag tgggtaacac catagacagg ctgaatacct aagaatccac ccggcttgaa
      301 ccagctctcg ccattgaatt gagcaatcat aataaaattg tttgttatca agacttcttt
      361 gcggatttct ggcaatctgt ctttgactga aatccagccg ttgttttcta caagtgttgg
      421 tggttcaata acttgttcag cttccccaaa taactctgat tctctttctt catcggttag
      481 tgggcggata tctgattttg ctctacctaa aacaacacca taaactgcat agggtaaatc
      541 ataggcttca tagctttcgt gatcatccat gtcatccgca aactcatagg cttcagtagc
      601 accatttaaa cagctttgtt ttgcttgctc taaggtttcg tgcagattta ggatatgtat
      661 atcatttgat acatccaccg aaaaaaattt gtcttcattc attttctttc tccaaaatac
      721 caatagttga gagaataata agcatactat ctcatgctat tcttaagtgc atctaaccac
      781 gctccagcat cttcggctga agcgaaatat aacccttgat caaatagttt ttctatataa
      841 gaatgtgtag ggaaatttga ttttatcaca ttgaaattat cgccaataaa ccacattcca
      901 tctcttggtt cttttaatgg acaaggaaga gtgagagtta ctgtaggtct tggttcttcc
      961 cacataccaa caatatcata ttgagctatt gttccatcat tgaaatgaga tccgctaaca
     1021 gcccacgata cttctgacaa aaatacattt tcttcatcaa ctgtataccc ttgtacttgg
     1081 tggtctttat tatctctaat atagtcatca ctaattaggt attttacaaa tgccttatca
     1141 ttatttctta gttttactgg ctcacctgcc aatgctttat ttaaatcaaa tggtttcatt
     1201 ttattctcc
//
LOCUS       DANLZQ010000193         1176 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.194, whole genome shotgun sequence.
ACCESSION   DANLZQ010000193 DANLZQ010000000
VERSION     DANLZQ010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1176)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1176)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1176
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.194"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..834
                     /locus_tag="PXE50_002621"
     CDS             <1..834
                     /locus_tag="PXE50_002621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlwI family type II restriction endonuclease"
                     /protein_id="HDL5623457.1"
                     /translation="NLRADAPLETISEAFKLDISKVYVALSKDLGITIKSPEQAATYV
                     NDERYRRFNTLIDKKFNDSVLIELLNCFEKRDDKRIEELVTDEAAIPTIFEYILGIIW
                     YKVSERQGNILDFMKLSLEANLLPKTHAAGGYADIIYEYEACTSYPKHSLLLEATLAD
                     GNNQRRMEMEPVSRHLGDYRIRFNNPFDYSLFVSTYLDKNVISDFRYRKIIPYTRDEE
                     TITGMKIISMDTDSLKKIIENKVKYKYLYEIFDKYHEMPLETVDWHDGMIKEATGEYK
                     S"
     gene            896..>1176
                     /locus_tag="PXE50_002622"
     CDS             896..>1176
                     /locus_tag="PXE50_002622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIR domain-containing protein"
                     /protein_id="HDL5623458.1"
                     /translation="MKNRIEHPKIFISYAWGSQEHDEKVIALATNLKGDGIDVIFDKW
                     QLKEGNDTFKFMEKSVLDESITNVLILIDPIYAKKANERAGGVGTETQI"
BASE COUNT          444 a          146 c          240 g          346 t
ORIGIN      
        1 aatctcaggg ctgatgcccc acttgaaact atatcagaag cattcaagtt agatattagc
       61 aaagtatatg tagctttaag taaagattta ggaattacaa ttaagagtcc ggaacaagct
      121 gcaacttatg taaatgatga acgatacaga agatttaata ctttgatcga taagaaattt
      181 aacgattctg tgcttataga gttactaaat tgttttgaga aacgtgatga taaaaggatt
      241 gaagaacttg ttacagatga ggctgcaata cctactattt ttgaatatat tttgggaatt
      301 atatggtaca aagtgagcga aagacaagga aatattttgg atttcatgaa gttatcatta
      361 gaagccaatt tattgccgaa gacccacgca gctggaggtt acgcagacat tatatatgaa
      421 tatgaagcgt gcacctctta tccgaaacat tcattattgc ttgaagcaac ccttgcagat
      481 ggaaataatc aaagaagaat ggaaatggag cctgtttcaa gacatttagg cgattatagg
      541 attagattta ataatccgtt tgattacagc ctatttgtta gcacatactt agataaaaat
      601 gtaatctcag attttagata tagaaagata attccataca ccagagatga agaaaccatt
      661 acaggaatga agattatttc aatggacaca gattctctta agaaaataat tgagaataag
      721 gttaagtaca agtatctgta tgaaatattt gataaatacc atgaaatgcc attagagact
      781 gtagattggc atgatgggat gataaaagag gctactggag agtataagtc atagtgatta
      841 taagatagtg agaaagaata cttattttga aaggaataca tgggaattga tacagatgaa
      901 gaatagaatt gaacatccta agatttttat ttcatatgct tggggatcac aggaacatga
      961 tgagaaggtt attgctttag ctacaaatct taaaggagat ggtatagatg tcatttttga
     1021 taaatggcag ctaaaagaag gcaatgatac ctttaaattc atggaaaaaa gtgttttaga
     1081 tgagagtatt accaatgtac tgattcttat agatcctatt tatgcaaaga aagcaaatga
     1141 aagagccggt ggcgtaggta cagaaacaca gattat
//
LOCUS       DANLZQ010000194         1164 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.195, whole genome shotgun sequence.
ACCESSION   DANLZQ010000194 DANLZQ010000000
VERSION     DANLZQ010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1164)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1164)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1164
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.195"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..442
                     /locus_tag="PXE50_002623"
     CDS             <1..442
                     /locus_tag="PXE50_002623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HDL5623459.1"
                     /translation="DLNKALAGEPVKLRNNDKAFVKYLISDDYIRDNKDHQVQGYTVD
                     EENVFLSEVSWAVSGSHFNDGTIAQYDIVGMWEEPRPAVTLTLPCPLKEPQENMWFID
                     NDFTIVKSMFANAPFVKKFLPQGRCFASEEDAQEWLDAMRNSRR"
     gene            520..1047
                     /locus_tag="PXE50_002624"
     CDS             520..1047
                     /locus_tag="PXE50_002624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF551 domain-containing protein"
                     /protein_id="HDL5623460.1"
                     /translation="MNEEKYFSVDVSDETHVIRLHETLEQAKQSCLNGATEAYEFAGD
                     MDDHESYESYEAYDLPYAVYGVVLGRAKSDIRPLTDEERASELFGEAEQVIEPPTLLE
                     NNGWISIEDKLPPIETDVLGLCDISGMQLILIVSRELADNEWYFLSVNQYGLDDDVIA
                     VTHWQPLPEPPKEEK"
BASE COUNT          399 a          196 c          253 g          316 t
ORIGIN      
        1 tgatttaaat aaagcattgg caggtgagcc agtaaaacta agaaataatg ataaggcatt
       61 tgtaaaatac ctaattagtg atgactatat tagagataat aaagaccacc aagtacaagg
      121 gtatacagtt gatgaagaaa atgtattttt gtcagaagta tcgtgggctg ttagcggatc
      181 tcatttcaat gatggaacaa tagctcaata tgatattgtt ggtatgtggg aagaaccaag
      241 accagcagta acattgacgt taccttgccc attaaaagaa cctcaagaaa atatgtggtt
      301 tattgacaat gattttacca tagtaaaatc tatgttcgca aatgccccct ttgtaaaaaa
      361 attcttgcca caagggcgat gtttcgcttc agaagaagac gctcaagaat ggttagatgc
      421 aatgcgaaat agtcgtaggt aaatcggcag cactaacagc tgaatgctgc tgttgaattt
      481 cttgtatatc cacataaaca cggaacgcgg agaaagaaaa tgaatgaaga aaaatatttt
      541 tcggtcgatg tctcggatga gacacatgta ataaggttgc acgaaacatt agagcaagca
      601 aaacaaagct gtttaaatgg tgctactgaa gcctatgagt ttgcgggtga catggatgat
      661 cacgaaagct atgaaagcta tgaagcctat gatttaccct atgcagttta tggtgttgtt
      721 ttaggtagag caaaatcaga tattcgtcca ctaacagacg aagaaagagc atcggagtta
      781 tttggggaag ctgaacaagt tattgaacca ccaacacttt tagaaaacaa cggctggatt
      841 tccattgagg acaaattacc acctattgaa acggatgtgc tagggttatg cgatatttca
      901 ggaatgcagt taattttaat agtttcaaga gaacttgccg ataacgagtg gtattttctt
      961 agtgtaaatc aatatgggct tgatgacgat gtgattgcag taacccactg gcaaccactt
     1021 cccgaaccac caaaggagga aaaatgaccg acaccgaacg cttagacttt atcgcccaac
     1081 gcaaattaga tgtccgatat tctgatttgg tggacgaatt tattattgct agctatacca
     1141 aaccgcacga gcagtatttt catt
//
LOCUS       DANLZQ010000195         1093 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.196, whole genome shotgun sequence.
ACCESSION   DANLZQ010000195 DANLZQ010000000
VERSION     DANLZQ010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1093)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1093)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1093
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.196"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..192
                     /locus_tag="PXE50_002625"
     CDS             <1..192
                     /locus_tag="PXE50_002625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5623461.1"
                     /translation="PQDGSVIDWDNIKNAKLTKYPLDNSEKRTSYLGCFTTDVSESYT
                     VDGESVRDIQLNALRKVNE"
     gene            192..560
                     /locus_tag="PXE50_002626"
     CDS             192..560
                     /locus_tag="PXE50_002626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623462.1"
                     /translation="MKITLNLGIEYNGKIRRDCTVRLLTMGGQCTAQEMIADLGFEEN
                     SEALSKREQTLVDMAYLSQQVTFDGIYQGNVTAQFLFDNLATEDYWQLIEATLTLRKK
                     RLENGVSQSESESPANPDLA"
     gene            590..778
                     /locus_tag="PXE50_002627"
     CDS             590..778
                     /locus_tag="PXE50_002627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623463.1"
                     /translation="MILLSKFAITAEQVWQMPLLEVFAWIESYLESEGVKTPHSPMGA
                     NSEVKRESYVFTRCGKIE"
     gene            831..>1093
                     /locus_tag="PXE50_002628"
     CDS             831..>1093
                     /locus_tag="PXE50_002628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623464.1"
                     /translation="MAKNMKVQLELTAKDTASPVLNQAAKTAEKAFKNTERAAQKSGN
                     AQTQAAQKAANATESSNRKIEQSYRNARRVAADVSRARETLGVR"
BASE COUNT          348 a          216 c          274 g          255 t
ORIGIN      
        1 cctcaagacg gttcggtaat tgattgggat aacattaaaa atgcgaagct cactaaatac
       61 ccgttagaca atagcgaaaa acgcacctct tatttaggct gttttactac cgatgtgagc
      121 gagtcttaca ccgttgatgg tgagtcggtg cgtgatattc aactcaacgc attgcgtaag
      181 gtgaatgaat aatgaaaatc actttaaatc ttggcattga atataacggg aaaattcgcc
      241 gtgattgtac ggtgcgattg ctgacgatgg gcggtcaatg cacggctcaa gaaatgattg
      301 cggatttagg gtttgaggaa aactcggaag ccctatcaaa gcgtgaacaa accttggtcg
      361 atatggctta cctttcgcag caagttacct ttgatggtat ttatcaaggt aatgtgacgg
      421 ctcaattttt atttgacaat ttagctaccg aagactactg gcagttgatt gaggcaacgc
      481 tcacactccg aaaaaagcgg ttagaaaatg gggtgagcca aagcgagagc gaaagcccgg
      541 caaatcccga tttggcgtag cagaagcctt taagcagtac cgacaagcgg tgattttact
      601 ctcaaaattt gcaattaccg ccgagcaggt atggcaaatg ccgttgcttg aggtatttgc
      661 gtggattgag agctacttgg agagtgaggg cgtaaaaaca ccgcatagcc caatgggtgc
      721 gaatagcgaa gtgaaacgcg aaagctatgt ctttactcgg tgtggcaaaa ttgaataggg
      781 gcgaaagccc cttttttgta ctttaaaatg agtttaaaga gactttaaaa atggcaaaaa
      841 atatgaaagt gcaactggaa ttgacggcaa aagatactgc ctccccagtt ttaaaccaag
      901 ccgctaaaac cgccgaaaaa gcctttaaaa atacagagcg agcggcacaa aaaagtggca
      961 atgctcaaac gcaagcagca cagaaagcag cgaatgctac agaaagctca aatcggaaaa
     1021 tagaacagag ttaccgtaat gcccgccgag tggctgccga tgtgagccga gcccgtgaaa
     1081 cattaggtgt tcg
//
LOCUS       DANLZQ010000196         1090 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.197, whole genome shotgun sequence.
ACCESSION   DANLZQ010000196 DANLZQ010000000
VERSION     DANLZQ010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1090)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1090)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.197"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..624
                     /locus_tag="PXE50_002629"
     CDS             <1..624
                     /locus_tag="PXE50_002629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HDL5623465.1"
                     /translation="NTVLNTLQCDYVLFSSEDNYQVIINLKKADYPKNEANFITMTLN
                     KKFGDAKFSGANHYLRCASFFNKKSTNNNEKSVLVDFTNTKTEEDNKCYFDNLLSSYK
                     NNNVKLEPLDIKIIDELGDDKAVIAQKEIQAEIALCKRIFKQLDWSAVDFRIVKRLYR
                     KGFSENEIAVALVRFTDFEDRHCDSHDYLTRTITKAIQNYQQCSKAC"
BASE COUNT          442 a          164 c          160 g          324 t
ORIGIN      
        1 aacacagttt taaacacact acaatgcgat tatgtgctgt tttcttctga agacaactac
       61 caagtcatca tcaatctaaa aaaagctgat taccccaaaa atgaagcaaa tttcattaca
      121 atgactttaa acaagaaatt tggtgatgca aaattttccg gtgcaaacca ttacttaaga
      181 tgtgccagct tcttcaacaa gaaaagcaca aacaacaatg aaaaatcagt tttagttgat
      241 tttacaaaca caaagacaga agaagacaat aaatgttatt ttgataactt attatctagt
      301 tataaaaata acaatgtaaa acttgagcct ttagacatca aaattattga tgagcttgga
      361 gatgataaag cagttattgc acaaaaagaa attcaagcag aaattgcttt gtgtaaacgt
      421 atattcaaac aattagattg gtctgctgtt gattttagaa ttgttaagcg tctgtacagg
      481 aaaggatttt cagaaaatga aattgctgtt gcacttgtca gatttactga ttttgaagac
      541 agacattgtg attcacatga ttatttgaca agaacaatca caaaagccat tcaaaactat
      601 caacaatgct caaaagcttg ttagatgtta taaggaaagt taaaaatcaa caaaagattt
      661 gacaaattta tataaaatcc ttattatata tgaaaaggaa gcgtagcctt aaaacgcaaa
      721 tgtgggttag cacatggtca atctgaaact aatctaggat atttaaggtc tagcagatgg
      781 caagcatcag aaaaacttga aactaatcta ggatatttaa ggcctagcag atggcagaca
      841 tcagaaaaac taacacttaa attttatatt tattaagccc acgtaattgt gggcttaatt
      901 cattaaatcc ttatgctaca taactttaaa tttttataac tatgagaaaa caagctaaat
      961 tagaaaaata tattcatctt attgaagatg cagcaaaatt tttcaatagc tatttcataa
     1021 ataaaaaggt tatttacaga acaaaaacac aagaaatatc tatcatattc aaacgctcca
     1081 atttcatgca
//
LOCUS       DANLZQ010000197         1024 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.198, whole genome shotgun sequence.
ACCESSION   DANLZQ010000197 DANLZQ010000000
VERSION     DANLZQ010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1024)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.198"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..>1024
                     /locus_tag="PXE50_002630"
     CDS             <1..>1024
                     /locus_tag="PXE50_002630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623466.1"
                     /translation="ESLEWLNEKNYGELYSSFLIAVGVKEFLDKGFIPNDNYRDIIAL
                     LPVALYVFHLRSLKHIKNLESNSYLDEEGRDTVNKYKAFFSIFEAEIRDATCICDNKI
                     VTINGEVCCDIKEVARKIVIEFLNEVDIGNKVKFYYPDERHELFVELLIVLATLRIYR
                     NRNIFFFEKGFFNFFPEFITILGTGAFNGFLDFPSLVGKVFPEIIDTINEGLDLDIAI
                     ENFEVLSQEEMTECMGLYEQALIKKAEEGEIGLLNVDEINSFYEDNSELILLAKQPMV
                     EEIIPKPDSKASSAILKFFDSNSNILIAKLKESGLQLSAVALQNDQNIARVANVVYNL
                     LPGMVR"
BASE COUNT          355 a          122 c          206 g          341 t
ORIGIN      
        1 atgagtcatt agaatggctg aatgaaaaaa attatggtga attatatagt tcctttctga
       61 ttgcagtggg agtgaaagag tttttagata aaggatttat acctaatgat aattatagag
      121 atattattgc tctactccca gtagcgttat atgtctttca cttaagatct ttgaaacata
      181 tcaaaaatct agaatctaac agttatttag atgaagaagg aagagatacg gtaaataaat
      241 acaaggcatt tttctctatt tttgaagcag agattcgaga tgcaacatgt atttgtgaca
      301 ataaaattgt aacaattaat ggtgaggtgt gctgtgatat taaggaggta gcaaggaaaa
      361 ttgttataga atttctaaat gaagtggata ttggtaataa agttaagttt tattacccag
      421 atgaaagaca tgagcttttt gtagagctgc tcattgttct agcaacatta agaatatatc
      481 gtaatagaaa tatattcttc tttgaaaagg ggttttttaa cttttttccc gaatttatca
      541 ctattctcgg gactggtgcg tttaatggat ttttagactt ccctagtttg gtaggaaagg
      601 tttttccaga aattattgat acgataaatg agggtttaga tttagatatt gcgattgaga
      661 actttgaagt gttgagtcag gaagaaatga ctgaatgtat gggtttatat gagcaggctc
      721 tcattaagaa agctgaagaa ggcgaaattg gtttattaaa tgttgatgaa ataaatagct
      781 tttatgaaga taatagtgag ctaatcttac ttgctaaaca acctatggtt gaagagataa
      841 tccctaaacc agatagcaaa gcctcctctg caattctaaa attctttgat tcaaactcaa
      901 atatcttaat tgctaaatta aaagaaagtg gtttgcaatt aagtgctgtg gcattacaaa
      961 acgaccaaaa tatcgcacga gtagcaaatg tcgtttataa cttattgccg ggcatggtaa
     1021 gaat
//
LOCUS       DANLZQ010000198          979 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.199, whole genome shotgun sequence.
ACCESSION   DANLZQ010000198 DANLZQ010000000
VERSION     DANLZQ010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 979)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 979)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..979
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.199"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            134..820
                     /locus_tag="PXE50_002631"
     CDS             134..820
                     /locus_tag="PXE50_002631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623467.1"
                     /translation="MAANSINASHIVGSSITADKLNVNNLAAISANLGKVTAGTITGT
                     TISGGTISGTTITGGIIKGARIEGLTGKFTGELEINQLIGGNIYEAKTWTSKATGKSK
                     TYSETKNSFALSDTYYEYVCQFVLPATKATRTLYVVHTPTGESKSETFYGSGSNRTPT
                     TITLPSVIDISNTISPNVSNPFNDSGAILIANTQYVVTCRAWCAGRGRSAKVNFRAII
                     SSTNGSSYQL"
BASE COUNT          344 a          178 c          202 g          255 t
ORIGIN      
        1 cccttggcaa aatgccggtg taaccgctat ccacggtggc tcaatagtta ctaataccgt
       61 tactgctcaa caaattgcag caaataccat taccgccaac gaaatcgcag ccggcacgat
      121 tgcagctcga aatatggcag caaactcgat taatgcaagt catattgtgg ggagttcgat
      181 cactgcggat aagctaaatg taaacaattt agcggcaata tcggcaaatc ttggtaaggt
      241 aactgctggt acaattacag ggacgacaat tagtggtggg acaatttcag gtacaacaat
      301 tacaggggga ataattaaag gagcaagaat tgagggatta acaggtaaat ttactggaga
      361 acttgaaatc aaccaattga tcggaggtaa tatctatgag gctaaaactt ggacatcaaa
      421 agcaacaggg aaaagtaaaa catattcaga aacgaaaaac agttttgcat taagtgatac
      481 atattatgag tatgtatgtc aatttgtact acctgctaca aaagcgacga gaacattgta
      541 tgttgtccac actccaacag gagagagtaa aagcgaaact ttttatggta gtggtagtaa
      601 tcggacaccg acaacaatta cattaccgtc tgtaattgat attagcaata ctatttcacc
      661 taatgtatct aacccattta atgattctgg ggcaatactc attgctaata ctcaatatgt
      721 agtaacgtgt cgtgcgtggt gtgcagggcg tgggagaagt gctaaagtga attttcgagc
      781 aattatatca tctacaaatg gttcatctta tcaattatag gaggcaaata tgaaaaaaat
      841 tatactactt acaacaatta tggtttcagc ttgtacaact caatataagc aagactatac
      901 aacaaaacca accttttgtt atcaactagc ccctcaagag caattaccgg ggaaaaactg
      961 tattggctca ggagggcat
//
LOCUS       DANLZQ010000199          960 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.200, whole genome shotgun sequence.
ACCESSION   DANLZQ010000199 DANLZQ010000000
VERSION     DANLZQ010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 960)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 960)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..960
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.200"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            223..960
                     /locus_tag="PXE50_002632"
                     /pseudo
     CDS             223..960
                     /locus_tag="PXE50_002632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007524908.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication protein"
BASE COUNT          340 a          166 c          151 g          303 t
ORIGIN      
        1 gactcctcta atagtccact cttgttccat tttggaacat ttttgtatat tatttcgcct
       61 tttctttctc attgtgttct atgtaggcaa cagcattttt tgcaaagtga tcgacgagaa
      121 cattcattac ttcagtccat tttacaggtc ttcctatctt cattccaact tccatcgcta
      181 atctttctat cttgagtttt ttctctaatt taatattgaa cagagcttta tgaaatggtt
      241 gatatagaac aaacgtcagt tgattggatt gatgtaactt attcagctca tattgattcg
      301 gaatctatcc aaaaacaact tatctctttt ttccaaaaca tccatttagg acaaacacgt
      361 cgtacaagac ataacaaaga atatgacaca acggcagaat ggaattcagg ttcagaacac
      421 cgtattttaa aagtttatct aaaaggtaat gaagttcaaa aaagactaca agaagcccag
      481 cacgacttca aaaaatcacc aagtaaaaag tatctgcaaa actcaattca agtattaagt
      541 aatccaaatc tcattgaatt ttcaaaaaaa tgtgttcgtt ttgaagcaag attaaaacgt
      601 tatttagata aacatcaaat cccacgcaat ttatttgact taattaaata tcagagagat
      661 tacgaagagc agggtagaag cctgattaaa gacctatggc aagacgcatt caaagacatt
      721 attaaggctg tcggggaaag caatatgaat atttacaaca gagatcaaat tcagcgttta
      781 ttacggaaaa attatttttc aatcactcca aaaggaaata tgagctatgc aaaggctgat
      841 cgtttattca gcttttataa gaatttacta agtgatggct atagagaaac gctagattct
      901 atgccaagaa acacattttg gagatatgaa aaggatctta tggccgttgg tttaactaaa
//
LOCUS       DANLZQ010000200          954 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.201, whole genome shotgun sequence.
ACCESSION   DANLZQ010000200 DANLZQ010000000
VERSION     DANLZQ010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 954)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 954)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.201"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            107..>954
                     /gene="msrA"
                     /locus_tag="PXE50_002633"
     CDS             107..>954
                     /gene="msrA"
                     /locus_tag="PXE50_002633"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005546455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HDL5623468.1"
                     /translation="MKYNQLLLCLVSAIFTTSSIANITTPNEMRSENLQDIYLAGGCF
                     WGIEAYMEKIYGVKEATSGYANGKTEQTAYRIIGQTDHAETVHVTYDANKISLEKLLQ
                     YYFKVIDPTSKNKQGNDIGRQYRTGIYYQNEQDKQIILKEIQAQQAKYKQKIQVQVEP
                     LKHYILAEEYHQDYLKKNPNGYCHIDLNQANSIIIDPKDYPKPSDATLKMKLTPLQYS
                     VTQRKNTERSFSNEYWDNTAPGIYVDITTGEPLFSSLDKYDSGCGWPSFTKPIINEVV
                     NYTEDN"
BASE COUNT          367 a          171 c          161 g          255 t
ORIGIN      
        1 gtaaaaccaa ttttgatctt agcaaaaaag taagaaatta tgaatgttta aggttaaacc
       61 ctcatcctta aaaaataaaa ttacataagt tataaaggag aactggatga aatacaatca
      121 actgttacta tgtttggtgt ctgctatctt taccacctcc tcaatagcaa acatcacaac
      181 ccctaacgag atgcgatctg aaaacttaca ggatatttac ttggcaggag gatgtttctg
      241 gggcattgaa gcctatatgg aaaaaatata tggcgtaaaa gaggctacat cgggctatgc
      301 caatggcaaa actgagcaaa ctgcttaccg aattatcggg caaaccgatc atgcagaaac
      361 agttcacgtg acctatgatg ctaataaaat ttctttagaa aagctgttgc aatattactt
      421 taaagtaatt gatccaacca gtaaaaataa acaaggtaat gatattggcc gccaatatcg
      481 gacaggtatt tattatcaga atgagcaaga taaacaaatt attttaaaag aaatacaagc
      541 tcaacaagca aaatacaaac aaaaaataca agtgcaagta gaaccattaa aacattatat
      601 tttggcagaa gagtatcatc aggattacct aaagaaaaat ccaaatggct actgccatat
      661 tgatttaaac caagccaaca gcattattat cgatccgaaa gattatccta aacctagtga
      721 tgcaacatta aaaatgaaat taacgccttt gcaatatagc gttacccaac gtaaaaatac
      781 tgagcgttca ttcagcaatg aatattggga taataccgca ccgggcattt atgttgatat
      841 aactacagga gagcctcttt tttcatctct cgataaatat gactccggct gtggctggcc
      901 aagttttacc aaaccaatta tcaatgaggt tgttaactat accgaagata atag
//
LOCUS       DANLZQ010000201          953 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.202, whole genome shotgun sequence.
ACCESSION   DANLZQ010000201 DANLZQ010000000
VERSION     DANLZQ010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 953)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 953)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..953
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.202"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..>953
                     /locus_tag="PXE50_002634"
     CDS             <1..>953
                     /locus_tag="PXE50_002634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623469.1"
                     /translation="YFCFDKKQWIKEVHKYSKGGFKRCVNIPFFRFSKFFLNNAQRTA
                     FSYVTHYIKKHSYAYSKADNIQELLVKFFSRKQPVMQSAFNHQKRIVKWLWAEFWDKN
                     IISMTLRIDGYRNANLWHYLRYQSRIEVLYKIANEHPNLLPLLAYVKPEYWKCSDLFS
                     YQNWVRSRDKQPFILYAKCQDKMLCESKGQWRWLKKQSRIVVDQCFLHVNQWQLLTEI
                     QMPFKIPVCVICFILTNFSMISCELDRSRQRRLLSIFIQYIYHYWKDNGFRQLKIHLS
                     HLRVLFQDIEDYMIHEGYLHGIPQTWQHLVYHLNLINSNTS"
BASE COUNT          329 a          136 c          164 g          324 t
ORIGIN      
        1 tatttttgtt ttgataagaa acaatggata aaggaagttc ataaatattc aaaaggtgga
       61 tttaagagat gtgttaatat ccctttcttt agatttagta agtttttcct taataatgca
      121 caacgaacag ccttttcata tgtaactcat tacattaaga aacattccta tgcctatagt
      181 aaggcagaca atattcaaga attattagta aagtttttct ctagaaagca acctgttatg
      241 caaagtgcat ttaatcatca aaaaaggatt gttaagtggt tatgggctga attttgggat
      301 aagaatatta tctcgatgac acttagaatt gatggttata gaaatgctaa cttatggcat
      361 tatttacgtt atcaatcacg gattgaggta ttgtataaaa tagcaaatga acacccgaat
      421 ctactaccat tattagccta tgttaaacct gagtactgga aatgctcgga cttatttagt
      481 tatcaaaatt gggtaagaag ccgtgataaa cagcctttta ttttgtatgc taaatgccaa
      541 gataagatgt tatgtgaatc aaaggggcaa tggagatggt taaaaaaaca gtcgagaata
      601 gttgtagatc aatgttttct acatgttaat caatggcagt tattaacaga aattcaaatg
      661 cctttcaaga tcccagtatg tgtcatatgt ttcatactta ctaattttag catgatcagc
      721 tgtgagttag atcgatctag acaacgtcga ttactctcta tttttattca atatatctat
      781 cattattgga aagataatgg gtttagacaa ttaaagatac atctttctca tctgagagtg
      841 ctttttcaag atattgaaga ttacatgata catgaggggt atttacatgg tatacctcag
      901 acttggcaac atttggttta ccacctcaac cttataaatt caaatacatc aaa
//
LOCUS       DANLZQ010000202          921 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.203, whole genome shotgun sequence.
ACCESSION   DANLZQ010000202 DANLZQ010000000
VERSION     DANLZQ010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 921)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 921)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.203"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..634
                     /locus_tag="PXE50_002635"
     CDS             <1..634
                     /locus_tag="PXE50_002635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623470.1"
                     /translation="MILEIIKDDNQIGFGFCEASDLSLIEDETKKIKAAMSLIDDLDP
                     DTSNEIKCFIDTIYLTKEGLNGERFMRSGTNFYMWGMMFLYINKEHSILYYADHIIHE
                     CAHTALNIINATDELVTNSADERFKAPLRKDTRPMIGLFHALFVLHRICSSFQKMKEK
                     IDDVYYDEFNHRLNDNLLKLHETYQTVRENAKTTEIGEKILNEIAKTWKL"
BASE COUNT          312 a          114 c          155 g          340 t
ORIGIN      
        1 aatgatctta gaaattatta aagatgataa ccaaattggg tttggatttt gtgaggctag
       61 tgatttatct ttaattgagg atgaaactaa aaaaatcaag gcagcaatga gcttaattga
      121 tgatttagac cctgatactt ctaacgagat aaaatgtttc attgatacaa tttatttaac
      181 aaaagaaggc cttaatggcg agcgatttat gcgttctggc acaaattttt atatgtgggg
      241 aatgatgttt ttgtatataa ataaggaaca ctctattctt tattatgcag atcatataat
      301 tcatgaatgt gctcatacag ctcttaacat tataaatgca actgatgaat tagtaacaaa
      361 ttcagctgat gaacgtttta aagcaccttt aagaaaggat actcgtccta tgattgggct
      421 atttcatgcg ttgtttgtac tccatagaat atgttcctcc tttcaaaaaa tgaaagaaaa
      481 gatagatgat gtttattatg atgaatttaa ccatagatta aatgataacc tgttgaagtt
      541 acatgaaaca taccagactg ttagagaaaa tgcaaaaacg acagagattg gtgagaaaat
      601 tttaaatgaa attgccaaaa cttggaaact ttaatcaatc tgaaattatg atgagaatgt
      661 tagttttctt taattcaata ttctcatcta cattaattgc ttttgctatt ttctttttta
      721 tggataatgg tataaatgct catgaggtat cattcttggt atctgttaaa ttttgggcga
      781 ttatgctttt ttcattgtct atttatattt ttaaccagac tcaaataagg tacttatttg
      841 tattgtcggg tatattaaag attattgcag ttattattat ttatttggaa cagagcctca
      901 tatctttaac ggcatttatt t
//
LOCUS       DANLZQ010000203          921 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.204, whole genome shotgun sequence.
ACCESSION   DANLZQ010000203 DANLZQ010000000
VERSION     DANLZQ010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 921)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 921)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.204"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            116..697
                     /locus_tag="PXE50_002636"
                     /pseudo
     CDS             116..697
                     /locus_tag="PXE50_002636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252416.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
     gene            698..868
                     /locus_tag="PXE50_002637"
     CDS             698..868
                     /locus_tag="PXE50_002637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HDL5623471.1"
                     /translation="MLKCKQITELVSLSQEQKLTLKQRVNVQVHLMLCSRCRAFSQNC
                     KTVDKLMKEFNS"
BASE COUNT          313 a          156 c          189 g          263 t
ORIGIN      
        1 ttagtatgtt aggtttaaaa atacttcata ccaatatccc ctaagttggg taaaacctta
       61 tgaaatagga tacaagcggt tagtttctct caatttttta ccaaaggatc acgcaatgag
      121 ccaaccggct ttacggcaaa tttccccctc gcagctagaa gatattcgtc tgcaaatggt
      181 gaagtttgcc tttttacagt taaaaaataa cgaacttgcc gaagatgtgg tgcaagaggc
      241 gtttgtcagc gcttataaat atgccgacag cttcaaaggt gaaagtgcgt taaaaacgta
      301 gatttttgca attttaaaaa acaagatcgt agatttagtg aaagccaaag gcaaattggt
      361 ggcagtatct gagctgatgg aagaagacga tcacgatctt gccgataaat tgtttaacga
      421 aaatggcggt tgggataaag atgcttatca atctaatgag tggaagaaca ccgaaagcca
      481 tacctattcc gctcaattct ggcaagtatt tgaattttgc ctaaataatc tgccggcaaa
      541 tcaagcaagg gtgtttatga tgcgttccca tttggaaatg gaaaccgaag aaatttgcgc
      601 agaatgtgag atttcaccag caaatgtgca taccttactg tatcgggcaa gattgcagtt
      661 acaggtctgt ttaagtcaaa aatggtttgg aggttaaatg ttaaaatgta agcaaattac
      721 cgaattagtt tctctgtccc aagaacaaaa actgacatta aaacaacgtg ttaatgtgca
      781 agttcattta atgctttgtt ctcgttgcag agcctttagc caaaactgca aaaccgtaga
      841 taagctaatg aaagaattta actcttagcg taaaagcaag cggtaaaatt tttaataaat
      901 atttcaaact taagtgagca t
//
LOCUS       DANLZQ010000204          914 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.205, whole genome shotgun sequence.
ACCESSION   DANLZQ010000204 DANLZQ010000000
VERSION     DANLZQ010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 914)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 914)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.205"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..>914
                     /locus_tag="PXE50_002638"
     CDS             <1..>914
                     /locus_tag="PXE50_002638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HDL5623472.1"
                     /translation="KFKTNLEKADKKYNSGLFKLQYIDQLINSTSSNLWSILKELYYP
                     YNSYSFSVLPSDLLGRIYEQFLGDELVVNNNELILQPKDYNLNRDIISTPNFIIRRII
                     DYTVNEYCKGKNDSNIYQSKFADIACGSGAFLLEVYQRLQDILVDYYIQNDKNKLEET
                     GVNQYKLRFEDKKNLLLNCVWGVDKDFNAVKACRFGLLLKLLENESDVTIANKISILP
                     NLDQNILWGNSLIDLSDKLTEKEKLKVNPINLQEYKFNVIIGNPPYLATEYMSSLYPE
                     EFKIYKSKYFVADKQFDKYYLFIERALN"
BASE COUNT          374 a          108 c          133 g          299 t
ORIGIN      
        1 aaaaatttaa aacaaactta gaaaaagctg acaagaaata taactctgga ttatttaaat
       61 tacaatatat agatcagcta attaactcga caagttcaaa tttatggtct attttaaaag
      121 agttatatta cccttataat tcatattcat tttcagtatt accatcagat ttgcttggta
      181 ggatatatga acaattttta ggtgatgagc tggttgtaaa caacaacgaa ttaatactcc
      241 aaccaaaaga ttataattta aatagagata ttattagcac acctaatttt attattcgaa
      301 gaataattga ttatacagtt aatgaatatt gtaagggtaa aaatgattct aatatttatc
      361 agagtaaatt tgcagatata gcttgtggat caggcgcatt cttactagaa gtgtatcaaa
      421 gattacagga tatattagtt gactactaca tccaaaatga taaaaataaa ctagaagaaa
      481 ctggtgtaaa tcaatacaag ttacgttttg aagataaaaa gaacttatta ttaaattgcg
      541 tttggggggt agataaagat ttcaatgcag taaaagcctg tagatttggg ttgcttctaa
      601 aattactaga aaatgaaagc gatgtaacaa tcgctaataa gattagtatt ctgcctaact
      661 tagatcaaaa tatactctgg ggaaatagtt taatagattt aagtgataaa ttaacagaaa
      721 aagaaaaact taaagtaaat ccaattaacc tacaagaata taaatttaat gttattattg
      781 gtaatcctcc atatttagcc acagagtata tgtcctcatt atatccagaa gaatttaaaa
      841 tatataaatc aaaatatttt gtagctgaca agcaatttga caaatattac ttatttattg
      901 aaagagcttt aaac
//
LOCUS       DANLZQ010000205          888 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.206, whole genome shotgun sequence.
ACCESSION   DANLZQ010000205 DANLZQ010000000
VERSION     DANLZQ010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 888)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 888)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.206"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..696
                     /locus_tag="PXE50_002639"
     CDS             <1..696
                     /locus_tag="PXE50_002639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623473.1"
                     /translation="ALVLAEWTKEYHGKYDNFINDIKSDNWTSAAINFHLGMEKVPLN
                     DLIYKEIYNYWDKTSLKDESERIISASIEFSNYFANKYSENIEEGIKNAEKEFKKNYN
                     KSLRYNAKKAQQRVQKYVEKVNQKNPQALKDLDNISNLKKINENLKKAAKFTGIISSI
                     KDYYDLAEGFRNGIKSNDWEPFLKTSAQIGASALMSMLVASMITGPTTIGSIIISAAF
                     ISIGGYIISLASR"
BASE COUNT          361 a          124 c          143 g          260 t
ORIGIN      
        1 gctttagtac ttgccgaatg gactaaagaa tatcatggca aatatgataa ctttattaat
       61 gacatcaaat cagataattg gacaagtgca gcaattaact ttcatttagg tatggagaaa
      121 gtaccattaa atgatcttat ttataaagaa atatataact actgggataa aacatcattg
      181 aaagatgaat cagagaggat tatatcagcc agtattgaat tcagtaacta ttttgctaat
      241 aagtactctg aaaacattga agaaggcatt aaaaatgcag aaaaagaatt taaaaagaat
      301 tataataaaa gtctaagata taatgctaaa aaagcacagc agagggtgca aaaatatgtc
      361 gaaaaagtca accaaaagaa tcctcaggca ctaaaagatc tcgataacat atccaactta
      421 aaaaaaatta atgagaattt aaaaaaagca gcaaaattta ctggtattat tagcagtatt
      481 aaggattatt acgatctagc agaagggttt agaaatggca taaagtctaa tgattgggaa
      541 ccttttttaa agacatctgc tcagataggt gcttcagctt taatgagtat gttagtagcc
      601 tcaatgataa caggcccaac gacaattggg agtattatta ttagtgctgc atttatttct
      661 atagggggat atattatttc actagcttcc cgttagatag tctttgttat actcaataac
      721 ctactatact acctataggc tattgaacta tcatacatca gctctattaa ccaaaaaaac
      781 aaaaaaaaat attgcaaata aaaataaaat tattgagata ggtccagagt acataattaa
      841 ctcatacttt tttttaagtt taatcctaag agcctgagct acaaaagg
//
LOCUS       DANLZQ010000206          845 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.207, whole genome shotgun sequence.
ACCESSION   DANLZQ010000206 DANLZQ010000000
VERSION     DANLZQ010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 845)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 845)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.207"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..>845
                     /locus_tag="PXE50_002640"
     CDS             <1..>845
                     /locus_tag="PXE50_002640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015483985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5623474.1"
                     /translation="AKNAIINSNLCRRLRVTSGNPTDTGSNNVEFSNNQAKSIAISKY
                     GSFDNPSLFIDNINFINNILEPSEFNQDVYIDGTILKQCQFINNRCISKSKQYSVRLA
                     RNNPCLNLTFKSNKLSDNPAIISGKQGVIFCDDLSLGVNKHRLRLRFSSPINFTVNQE
                     WQKMPFDRVLNDINGHVDIVSGQFIARTGGTFHLKGKITVTNSSEDVLNLYQLRLLIN
                     NEEKERLINQSVSPKNSKSNTNGMTTINFDTVVDLKVGDIVDLQYKTTHELTLLSDSF
                     LSQIYV"
BASE COUNT          297 a          129 c          148 g          271 t
ORIGIN      
        1 gctaaaaatg ccattatcaa cagcaacctc tgccgtcgct tgcgtgtcac atcaggtaat
       61 ccgactgaca caggcagcaa caatgtagaa ttttcaaata atcaagcaaa atctattgca
      121 atatcgaaat atggttcttt cgataatcct tcattgttta ttgataatat caattttatt
      181 aataacattt tggagcccag tgaatttaat caagatgtgt atattgacgg gacaatttta
      241 aaacagtgcc aatttattaa taatcgttgt attagcaagt ctaagcaata ttctgtcaga
      301 cttgctcgca ataatccgtg cttaaattta acatttaaga gtaataaatt atcggacaat
      361 cctgcgatta tatcaggtaa gcaaggtgtt attttctgcg atgatttgag cttaggagta
      421 aataagcaca gattaagatt gcgattttca tcgccgatta attttactgt taatcaagaa
      481 tggcaaaaaa tgccgtttga cagagtgtta aatgatatca atggtcatgt tgatattgtc
      541 agtggtcaat ttattgcaag gacaggcggc acttttcatt taaaaggtaa aataacggtt
      601 acaaattcat cggaagatgt gctgaattta tatcaactca ggctgttaat aaataacgaa
      661 gagaaagaaa gactgattaa tcaaagtgtt tcacctaaaa acagcaaatc aaatacaaat
      721 ggtatgacaa caatcaattt tgatactgta gttgatttaa aagtaggtga cattgttgat
      781 ttgcagtata aaacaacgca tgagttgaca ttactgtcag actcattttt atctcaaatt
      841 tatgt
//
LOCUS       DANLZQ010000207          820 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.208, whole genome shotgun sequence.
ACCESSION   DANLZQ010000207 DANLZQ010000000
VERSION     DANLZQ010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 820)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 820)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..820
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.208"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            24..173
                     /locus_tag="PXE50_002641"
     CDS             24..173
                     /locus_tag="PXE50_002641"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623475.1"
                     /translation="MNKFMKLEMKKTNQGKKKKRELKERIDTLSLEIDKYMKSSYAEY
                     LETLK"
     gene            318..794
                     /locus_tag="PXE50_002642"
     CDS             318..794
                     /locus_tag="PXE50_002642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623476.1"
                     /translation="MELGKTTETDVKEMYNLEPEGVNKYSKGNQYFIDPTQLDLEDLK
                     STLIIFDEKGVLVFVGSEFNSISSIEDSKNRYKKFDYLYKILASKYKLVKKERPFVGD
                     QYAKFKDGNSEIELSEPHMGGFKINLTYAKKEFLDAFQKIQSEDKKQKTKDEASSL"
BASE COUNT          354 a          100 c          131 g          235 t
ORIGIN      
        1 aggaagttga actaaagaaa actatgaaca aatttatgaa gttagaaatg aaaaaaacga
       61 atcaaggcaa aaagaaaaaa agagaattaa aagaaagaat agatacactt agtttagaaa
      121 tagataaata tatgaaatct agttatgcag aatatctaga aactttaaaa taacaaaaat
      181 agcatccccg caagaatgag gagatggcta tttttgttat ttatagctta taggaaactc
      241 attatgaaaa agatgttaaa gctacattat ttgcaactat tagtacttct gtattagctg
      301 aaccaaccgt ttttaaaatg gaactaggta aaacaacaga aacagatgta aaagaaatgt
      361 ataaccttga accggagggt gttaataaat acagcaaggg taatcagtat tttattgatc
      421 caacgcaatt agatttagaa gatcttaaat caacgcttat tatctttgat gaaaaagggg
      481 tattagtttt tgttggttcc gagtttaatt ctatatcttc tatcgaggat tcaaaaaacc
      541 ggtataaaaa attcgattat ttgtacaaaa tactagcaag caaatataaa cttgtaaaaa
      601 aagaacgtcc atttgtaggc gatcaatatg ctaaatttaa agacggtaat tcagaaatcg
      661 aattatcaga accacatatg ggtggtttta aaattaactt gacttatgca aaaaaagaat
      721 tcttagacgc attccaaaag atacagtctg aagataaaaa acaaaaaact aaagatgaag
      781 catcatcgtt ataattaaaa ttttttagtc atacattaca
//
LOCUS       DANLZQ010000208          803 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.209, whole genome shotgun sequence.
ACCESSION   DANLZQ010000208 DANLZQ010000000
VERSION     DANLZQ010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 803)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 803)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.209"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            141..>803
                     /locus_tag="PXE50_002643"
     CDS             141..>803
                     /locus_tag="PXE50_002643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HDL5623477.1"
                     /translation="MLNWAGKSTAYQTLQTPTSKTLTPCEEESVDFENTQNIFIEGEN
                     LDVLKALQKSYFNSVKMIYIDPPYNTGNDFIYNDSFADTKADYAEKVGDVDEHGKLKR
                     AFVRNSKENGHYHSNWLNMMLPRLHLAKNLLRDDGVIFISIDDNEQAQLKLLCDEVFG
                     EENFVAILSVENNPKGRKNSKFISVSNDFCIIYAKNKEMGKFVENIPKNAKDMCQDEN
                     GHY"
BASE COUNT          276 a          138 c          152 g          237 t
ORIGIN      
        1 ttgccaactt ttcgcttaaa gatcaacaac tttctcaatt aaaatccctt ttacctgaaa
       61 ttttcaccga aggtaaaatc gacttcgaca aattccaaca acttttttcg gataattttt
      121 ccaccgaacc tgaccgctat atgctcaact gggcaggaaa atcaacagcc tatcaaacct
      181 tacaaacccc aaccagcaaa acgctcactc cttgcgagga agagagtgtg gattttgaaa
      241 atacgcagaa tatctttatt gagggtgaaa atttagatgt attaaaagcc ctgcaaaaat
      301 cctacttcaa ttcggtcaaa atgatttata tcgatccgcc atacaataca ggcaacgatt
      361 ttatttataa cgacagtttt gccgatacca aagcagatta tgcggagaaa gtgggcgacg
      421 ttgatgaaca cggcaaattg aaacgagcct ttgttcgtaa cagcaaagaa aatgggcatt
      481 atcacagtaa ctggctgaat atgatgttgc ctcgtttgca tctcgcaaaa aatttactgc
      541 gtgatgacgg ggtgattttt atttcaattg atgataacga acaggcacag ctgaaattgc
      601 tttgtgatga agtgtttggg gaggagaatt ttgttgccat attatcagtt gaaaataatc
      661 cgaaaggtag aaagaattct aaatttattt ctgtaagtaa tgatttttgt attatttatg
      721 ctaaaaataa agaaatgggg aaatttgttg aaaatattcc taaaaatgct aaggatatgt
      781 gtcaagatga aaatggacat tat
//
LOCUS       DANLZQ010000209          802 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.210, whole genome shotgun sequence.
ACCESSION   DANLZQ010000209 DANLZQ010000000
VERSION     DANLZQ010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 802)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 802)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.210"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            130..519
                     /locus_tag="PXE50_002644"
     CDS             130..519
                     /locus_tag="PXE50_002644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5623478.1"
                     /translation="MADPIEWSIITTDCFDEWFGQQDGSTQERVLACLIYLRKFGYSL
                     GRPYADTVYQSKFPNMKELRIQNKGKPIRAFYAFDPLRQAIVLCAGEKGKDKRFYEKM
                     IALADAEFTSYLNNLEKENENVRSNAQ"
     gene            491..790
                     /locus_tag="PXE50_002645"
     CDS             491..790
                     /locus_tag="PXE50_002645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HDL5623479.1"
                     /translation="MKTLDQMLNELSPERRQKVEDMAQEMIREIQLSKLREELNLSQQ
                     QLATALGISQPAIAKLEQKDNDPRLSTLKRYIEAMGGKLKLAVELPTGDERVIRI"
BASE COUNT          279 a          138 c          153 g          232 t
ORIGIN      
        1 tggattgttg ataaaaaaag accgcttgta gtcatacaaa cggcttagta ggaagagtaa
       61 attgctttac ataatataac cttttattta tacttcattt ataaatagta agttataaaa
      121 ggttcaaaaa tggcagaccc tatagaatgg tctattatca cgactgactg ctttgatgaa
      181 tggttcggtc aacaagatgg aagtactcaa gaacgtgtct tggcttgttt aatctatctg
      241 cggaaattcg gttatagtct aggcagacct tatgctgata cagtttatca gtctaaattc
      301 cctaatatga aagagttacg cattcaaaac aaaggtaagc caattcgagc attttatgct
      361 tttgaccctt tacgccaagc gatagtactt tgtgctggcg agaaaggtaa agacaaaaga
      421 ttctatgaaa aaatgatcgc tcttgctgat gcggaattta cctcctattt aaataattta
      481 gagaaagaaa atgaaaacgt tagatcaaat gctcaatgaa ctctctcctg aacgccgcca
      541 aaaagtggaa gatatggctc aagaaatgat tagagagata caactttcaa aactaagaga
      601 agagctaaat ctctctcaac aacaattagc tacagctctc ggtatttcac agcctgctat
      661 tgctaaactt gaacagaaag ataacgatcc aagattatcc acgctcaaac gctatattga
      721 agcaatgggc ggtaagttaa aacttgccgt tgaattgcct acaggcgatg agcgtgtaat
      781 taggatttaa ttactttgtt aa
//
LOCUS       DANLZQ010000210          729 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.211, whole genome shotgun sequence.
ACCESSION   DANLZQ010000210 DANLZQ010000000
VERSION     DANLZQ010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 729)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 729)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.211"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            129..359
                     /locus_tag="PXE50_002646"
     CDS             129..359
                     /locus_tag="PXE50_002646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623480.1"
                     /translation="MSLLKKAQTFISIFNDVRTKNEAQRQSSNNLNVALKNAAEMRAE
                     MNGFSLKPQKRSTYFADHYGCGIHAVETYDNV"
     gene            458..>729
                     /locus_tag="PXE50_002647"
     CDS             458..>729
                     /locus_tag="PXE50_002647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011497995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5623481.1"
                     /translation="MFYSNNPLIKHKTGLLNLAEELGNISQACKVMGMSRDTSYRYQQ
                     AVEQSGVDALLNQNRRVPNLKNRVDEATEQAVVKFAFDNPAFGQVRV"
BASE COUNT          241 a          129 c          146 g          213 t
ORIGIN      
        1 tcaataccat tggaagtgag aatggtctaa aaacactttt ctttattcct gatttttaac
       61 tacagctaat atttcattag aagaaagtcg ccagctttgt caggaagtca tatatgggag
      121 aaagaacaat gtctctactt aaaaaagcac aaacgtttat ttctattttt aatgacgtgc
      181 gaactaaaaa tgaagctcaa cgccagtctt caaacaattt aaatgttgcc ttgaaaaatg
      241 ctgctgaaat gagagctgag atgaatgggt tctcccttaa gcctcaaaag cgttctactt
      301 actttgctga ccattatggt tgtggtattc atgcagtaga aacctatgat aatgtgtaga
      361 agatcagact tgatctgaca attcactcta aaaagtgaga gtttcccgtt tagaatatga
      421 gtgtccaaat tcaatctaaa caaaaaagga aactctcatg ttttattcta acaaccctct
      481 cattaaacac aagaccggtt tattaaattt agcagaagaa ctgggcaata tctctcaagc
      541 ctgtaaggtg atggggatga gtcgagatac atcctatcgc tatcaacaag cagttgagca
      601 aagtggggtg gatgccttac ttaatcaaaa tcggcgtgtt cctaatctaa aaaatcgtgt
      661 ggatgaggca acagagcaag ctgttgtgaa gtttgcattc gataatccgg catttgggca
      721 ggtacgagt
//
LOCUS       DANLZQ010000211          726 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.212, whole genome shotgun sequence.
ACCESSION   DANLZQ010000211 DANLZQ010000000
VERSION     DANLZQ010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 726)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.212"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
BASE COUNT          255 a          147 c           89 g          235 t
ORIGIN      
        1 cttactcata tctaacttac taagcaacag tacatctata actttcacaa aaataacagg
       61 caatactata actaatatca aaatagaaaa atccaccata ctttctccat taaagtattt
      121 caacttactt tatacattac tttaattgca tcttcagaaa gtaaatcaca acgaggtaat
      181 acttcattga tagccttcca agaaagtaaa tcttgctact ctatagcacc tttcattaaa
      241 agtggttgtt tctcagaata actttcacga aattcttgat aagaaattgg aaattgaatt
      301 ttcattttca tctccactag ccttgataat ctgtaccatc accacaatcg tagtttgagc
      361 cagattggtt attattcgtt ctacctggaa ctccaaacgt aggctttatt ggtaaagatg
      421 atggaattaa ttcttttaca ccgctaggta aagaattttc atgtattgta ataggtaggc
      481 tcctcgctaa atcaagggct aaattaacag aagtactgga taaaccgcct aaagcccccc
      541 tcttgcaaac cctgtagcaa aagcaacgcc ataagataca agatctggtt gattagcctt
      601 attttcagaa ttccctccaa ctactaagct taattgtaaa attgatggtt ctttcatttc
      661 attctccctt taatctaatt ctgatcacaa aaaccaatat taaaaataat tctaaaaata
      721 atacta
//
LOCUS       DANLZQ010000212          707 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.213, whole genome shotgun sequence.
ACCESSION   DANLZQ010000212 DANLZQ010000000
VERSION     DANLZQ010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 707)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 707)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.213"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(<1..>707)
                     /locus_tag="PXE50_002648"
     CDS             complement(<1..>707)
                     /locus_tag="PXE50_002648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015483985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5623482.1"
                     /translation="RILVDAYYEDGTTGGGEFVADLQDLVTPDDGGVCFVVNNNGGRW
                     KRVDLSHLTLFDFWAVGDGVTNDESAFVNAMRYSQFFIENGTFRINNAVNSVRDNVKI
                     LGNKTGKLVLGAGIQQAGAEVFNINHSNYFISGFCIETPNKAIGIRFKSLDDAGVKNL
                     HIDNVVFNGTFYGVRAGESIQADTNYPTDNVIVQNCQSYCGSGNAGHYLCTKVKGVRF
                     FNNIAIGGRNVSAYGATS"
BASE COUNT          228 a          178 c          108 g          193 t
ORIGIN      
        1 gatgttgcac cgtaagctga tacattgcga cctccaattg ctatattgtt aaaaaatcgc
       61 acacctttaa ctttggtgca gagataatgt cccgcattac ctgaaccaca atacgattgg
      121 cagttttgta caatcacatt atcagttggg taattagtat ccgcctgaat actttcacct
      181 gccctgaccc cgtagaaggt gccattaaac acaacattgt caatatggag atttttaaca
      241 ccagcatcat ccaaagactt aaatcgaata ccaattgctt tgttcggtgt ttcaatacaa
      301 aaacccgaga taaaataatt gctgtgatta atattaaaaa cttcggcccc tgcttgctgg
      361 atacctgcac ctaatactaa tttgccggtc ttattgccca aaattttcac attatcgcga
      421 acagaattaa cggcattgtt gatacgaaat gtaccgtttt cgataaaaaa ttgagaatat
      481 ctcatagcat ttacaaatgc tgattcatca tttgttaccc cgtcaccgac ggcccaaaaa
      541 tcaaataatg taagatgtga aaggtcaaca cgcttccacc gccccccatt attattcaca
      601 acaaaacaaa ccccaccatc atcaggcgta actaaatcct gcaaatcagc cacaaactcc
      661 ccaccgcctg ttgtgccgtc ctcatagtaa gcatccacca aaatacg
//
LOCUS       DANLZQ010000213          690 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.214, whole genome shotgun sequence.
ACCESSION   DANLZQ010000213 DANLZQ010000000
VERSION     DANLZQ010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 690)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 690)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.214"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..>690
                     /locus_tag="PXE50_002649"
     CDS             <1..>690
                     /locus_tag="PXE50_002649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623483.1"
                     /translation="KYQGETCVPKGHKGFNHIVKSYLDGIEKRICEQIEQDIGSHLVQ
                     RAANVIAKLQLEEDKYSLDYMTVKRAICDELIVDIAETDAKKFLDYLIKENVISKNAY
                     YNRDEEYIYFNYERIGDYQKANLILKNIHNQDDFVQWLSTEQGKKLYSRVGYDKGVWE
                     ALSVLLPERFDFEVFEVIDYSKEWSWFEIIVENLFWRQPEKINMQKLHQFFKNSPYFN
                     QATWINILYQLA"
BASE COUNT          262 a           72 c          132 g          224 t
ORIGIN      
        1 aagtatcaag gggaaacctg tgttccaaaa ggtcataagg gatttaatca cattgtaaaa
       61 tcttatttag atggtattga aaaacgcatt tgtgaacaaa ttgaacagga tattggttct
      121 catctggttc aaagagcagc taatgttatt gccaaattac aattggaaga agataaatat
      181 agtttggatt atatgacggt taagagagca atttgtgatg aattaatagt agatattgca
      241 gaaacagatg ccaaaaaatt tcttgattat ttaatcaaag aaaatgttat tagtaaaaat
      301 gcttactata acagagatga agagtatatt tattttaatt atgaacgaat tggggattat
      361 caaaaggcca atttaatatt aaaaaatatt cataatcaag acgattttgt tcaatggtta
      421 agcactgaac aaggaaaaaa gctatatagt agagttggct atgataaggg cgtatgggaa
      481 gcattaagtg tattgttgcc agaacgattt gattttgaag tatttgaagt gattgattat
      541 tcaaaggaat ggtcttggtt tgagattatt gtagaaaatc tcttttggag gcagcctgaa
      601 aaaatcaata tgcaaaaact acatcaattt ttcaaaaata gtccatattt taatcaagca
      661 acttggatta atattttata tcaactggct
//
LOCUS       DANLZQ010000214          657 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.215, whole genome shotgun sequence.
ACCESSION   DANLZQ010000214 DANLZQ010000000
VERSION     DANLZQ010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 657)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 657)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.215"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..>657
                     /locus_tag="PXE50_002650"
     CDS             <1..>657
                     /locus_tag="PXE50_002650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDL5623484.1"
                     /translation="LLTELLSLEGFKMKVVHNGLEGLNELESNQYDLVLLDVMMPVLS
                     GVKTLKRIRQKYSLPVLMLSARDDQIDRILGLELGADDYVPKPFNNRELVARMKAILR
                     RTTSRPASTDHSEQNYTENISKSLQFAGVELHSGRQQAYYQGCDLDLTGTEFALLQML
                     MRNSGEILSRELLSLKILGKNLTPYDRAIDMHISNLRKKLPEREDGLPWFKTLRGRGY
                     L"
BASE COUNT          227 a           97 c          130 g          203 t
ORIGIN      
        1 ctactaactg aattactttc attagaagga tttaaaatga aagttgtgca taatggttta
       61 gaaggcttaa atgagttaga gtctaatcaa tatgatttag tattactaga tgtgatgatg
      121 ccggtattaa gtggcgtgaa aacattaaaa cgtatacgac aaaaatactc attacccgtt
      181 ttaatgttaa gtgcaagaga tgatcaaatt gatagaatct taggtttaga attaggggct
      241 gacgattatg taccgaaacc ttttaataat cgtgaactag tcgctagaat gaaagcgata
      301 cttcgaagaa caacctctcg cccagcttca acagaccatt ctgaacagaa ttatactgaa
      361 aacatctcta aatcattaca atttgccgga gttgaattac attcaggacg tcagcaggct
      421 tattatcaag gatgtgatct tgatttaacg gggactgaat ttgcattatt acaaatgtta
      481 atgcgaaact caggggagat tttgtccaga gaattattga gtttaaaaat tttagggaaa
      541 aatttaacgc cttatgatcg tgcaattgat atgcatattt ctaatcttcg taaaaaatta
      601 cccgaacggg aagatggatt accttggttt aaaaccttaa gaggtcgggg ttactta
//
LOCUS       DANLZQ010000215          657 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.216, whole genome shotgun sequence.
ACCESSION   DANLZQ010000215 DANLZQ010000000
VERSION     DANLZQ010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 657)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 657)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.216"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
BASE COUNT          215 a           97 c          106 g          239 t
ORIGIN      
        1 ttatcaaaat ataagcgtaa ataaattgtg ctaagggata aaactatatc atgaatataa
       61 aaggaaactt ttcaaatcaa aaaaattaat gattaatccc ttcttgtttg gatagttact
      121 ctatttttga agaacattcc gtatttttaa tgatgtttta taagcaggat ataaaatttt
      181 taatatttca aataaaaagt gagctaaaaa agattttaac tcactttcat ttcgtaggct
      241 caaattagac ctactacgcc gatataaaaa gttggtcttt ttatatcaaa gctaagctct
      301 taacaacgag tagtagattc tctaatatgt ttagctgtaa ctttcattgg cttttgttgc
      361 gctgtagtgt ttttcatatt gttctccaga ttttgtgagt aattagtaag accttttctt
      421 ttgaaaagga ccgagctttc aaagtggtct gattacctat tgagcaatca gcttgctttt
      481 caagccccat gtcattatat cataaccatt gtttttagtc aataccattt tggggaatgc
      541 atggaaggcg agtacaaatt gaaggctgat gtcacgatct atcatgatac gccttataca
      601 aaagttctct ttggaagtac atatattgag attttagacg atgaccagta ttacttt
//
LOCUS       DANLZQ010000216          645 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.217, whole genome shotgun sequence.
ACCESSION   DANLZQ010000216 DANLZQ010000000
VERSION     DANLZQ010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 645)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 645)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.217"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(19..303)
                     /locus_tag="PXE50_002651"
     CDS             complement(19..303)
                     /locus_tag="PXE50_002651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010128390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623485.1"
                     /translation="MANITLSHITPKHFFETVRLLKMQEHRIYIGVDSIEVRFKQKRF
                     ESKKETDKRLEQLEHFMLFLQEIINSDIPIDLDEFIYTYHRSVRRGFYRR"
     gene            complement(321..482)
                     /locus_tag="PXE50_002652"
     CDS             complement(321..482)
                     /locus_tag="PXE50_002652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007525341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin"
                     /protein_id="HDL5623486.1"
                     /translation="MEKIENSSNLVLKLSLENQMLILESLEHPKEPNLVMLEALKKYS
                     LYVAKTSNK"
BASE COUNT          200 a          112 c          103 g          230 t
ORIGIN      
        1 cactcctctt tcacatcact aacgtcgata aaaacctctc cttactgacc tgtgataggt
       61 gtatataaac tcatctaaat ctataggaat atctgaatta atgatttctt gtagaaagag
      121 cataaaatgc tctaactgtt ctagtctctt atctgtttcc ttttttgact caaaacgctt
      181 ttgcttaaaa cgaacttcta tcgaatctac accgatgtaa attcgatgtt cctgcatttt
      241 gagtagtcgg acagtttcaa aaaaatgttt aggggtgatg tgagaaaggg ttatatttgc
      301 catagtttag cttgaaaacg ctatttatta cttgttttag caacatacaa agaatacttt
      361 tttaaagcct ctagcattac taaattaggc tctttaggat gttctaagct ctcaagaatt
      421 agcatttgat tttcaagaga aagctttaga acaagatttg aactattctc tattttttcc
      481 attttaatta tctcattaga tgactttcgc ataacaacag gttatgtgta aattctcgtg
      541 cagtgggaca agcccgattg tactgcactc gaattgtaac ataacctgta ggacattatg
      601 cgaaaattaa taatataagt ttttcatcaa tcggcggtat tattg
//
LOCUS       DANLZQ010000217          644 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.218, whole genome shotgun sequence.
ACCESSION   DANLZQ010000217 DANLZQ010000000
VERSION     DANLZQ010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 644)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 644)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.218"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..>644
                     /locus_tag="PXE50_002653"
     CDS             <1..>644
                     /locus_tag="PXE50_002653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDL5623487.1"
                     /translation="EIEQTRAAYDRLKRSGVASQNELRRASEATKQRVRELNAELGKT
                     SFGDKAKGFGRGLMSAGVGIAAGAAMARQPAKNQMEFDRQLAMASNTAFSDRDVKGRI
                     EGKKELLAAVQEAVKVGGGTKEDALLTLDTLIASGTMKAETAMSLLPTLQKGAVATGA
                     SSEDMAKIAISSMQQFGIKEEDIGRALDMAVAAGQAGNFELADMARWLPQQMAAG"
BASE COUNT          184 a          129 c          190 g          141 t
ORIGIN      
        1 gaaattgaac aaactcgtgc agcctatgac cgcttaaaac gctcaggtgt tgcctctcaa
       61 aatgagctac gccgtgcctc agaagccact aagcaacggg tgcgagagct gaatgcagaa
      121 ttgggtaaga caagctttgg ggataaggct aaaggatttg ggcgtggttt gatgagtgcc
      181 ggtgtcggta ttgcagcagg tgctgcaatg gctcgtcagc cagccaagaa ccaaatggag
      241 tttgaccgac agttagcgat ggcatcaaac actgcctttt ccgaccgtga tgttaaaggg
      301 cgtattgagg gcaagaaaga gttattagca gcggtgcaag aggcggttaa ggttgggggt
      361 ggaacaaaag aagatgctct tttaactctt gatacgctaa ttgcctcagg aacgatgaag
      421 gctgaaactg caatgagcct attaccaacc ttgcagaaag gtgctgtagc aacaggtgca
      481 agctccgagg atatggcaaa aattgcgatc tcctcaatgc aacaatttgg gattaaagaa
      541 gaggatattg ggcgggcatt ggatatggca gttgcagccg ggcaagcagg taactttgag
      601 cttgcagata tggctcgctg gctaccacaa caaatggccg cagg
//
LOCUS       DANLZQ010000218          643 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.219, whole genome shotgun sequence.
ACCESSION   DANLZQ010000218 DANLZQ010000000
VERSION     DANLZQ010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 643)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 643)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.219"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..493
                     /locus_tag="PXE50_002654"
     CDS             <1..493
                     /locus_tag="PXE50_002654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5623488.1"
                     /translation="ARPLNTLEVKGLTVVDDSQKPLFSEVNQALYHGLSPIEVVASRV
                     QITRAITTYTKNVTNTDDPSYLDLTTIRTLDYVRKAIQTRQRLRFPRAKNSHRIVAKV
                     RSEILDVLYQLEGEEVIENVEAWKNRLLVVRNQDPTYLDLEIPADVVNGLHVIRNKIT
                     LIL"
     gene            504..>643
                     /locus_tag="PXE50_002655"
     CDS             504..>643
                     /locus_tag="PXE50_002655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5623489.1"
                     /translation="MSIVYEGSCVLEVDGVEIEITKLDVKTVTGRKLVKTMNSSGRAR
                     GYS"
BASE COUNT          182 a          127 c          160 g          174 t
ORIGIN      
        1 ggctcgcccg ttaaataccc ttgaagttaa aggcttaacg gtcgtagatg actcgcagaa
       61 accgttattt agcgaagtaa accaagcgtt atatcacggt ttaagcccga ttgaggtggt
      121 ggcaagccgt gtgcagatta cccgtgcgat tactacatac accaaaaacg tgacgaatac
      181 tgatgaccca agctatttgg atttaaccac cattcgtacg cttgactatg tgcgtaaggc
      241 aatccaaacc cgtcagcgtt tgcgtttccc tcgtgcgaaa aactcccacc gtattgtggc
      301 aaaagtacgc tcggagattt tagatgtgct ttatcagctt gagggcgaag aggtaatcga
      361 aaatgtggaa gcgtggaaaa atcgcttatt agtggtgcgt aatcaagacc cgacttactt
      421 ggatttagaa atccctgcgg atgtggttaa tggcttgcac gttattcgta acaaaattac
      481 gttaatttta tagggggtgc tagatgtcaa ttgtttatga aggctcttgc gtgcttgagg
      541 tagatggcgt tgagattgaa attaccaaac ttgatgtaaa aaccgtaacc ggtcgcaagc
      601 tggttaaaac gatgaacagt tccggacgtg caagaggtta ttc
//
LOCUS       DANLZQ010000219          639 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.220, whole genome shotgun sequence.
ACCESSION   DANLZQ010000219 DANLZQ010000000
VERSION     DANLZQ010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 639)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 639)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.220"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..>639
                     /locus_tag="PXE50_002656"
     CDS             <1..>639
                     /locus_tag="PXE50_002656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HDL5623490.1"
                     /translation="DFKDLPDKWVGANLTEEELSLINKVKNHRSVYKFSDIATVEVGI
                     VTGANDFFLVNDHIVSKYKLDRFVYPMFGKSQHCKGIIYDNEQHFENKEKNLPTNFIY
                     LEDNESNLPLLVQTYIKEGEDAEYHKRYKCKIRKPWYKVPSVYSTNIGMLKRSHEAPK
                     LILNKLGAYTTDTAYRIKSNKFQDEILVCCFLNPLTMILSELNGRFYGGGVL"
BASE COUNT          236 a           76 c          122 g          205 t
ORIGIN      
        1 tgatttcaaa gatcttcctg ataaatgggt tggggctaat ttaactgaag aagaattgag
       61 tcttattaat aaggtaaaaa atcatagatc tgtttataaa ttctctgata tagcaacggt
      121 ggaagttggt atagttacgg gagccaatga ttttttctta gttaatgatc atattgttag
      181 caagtataag ttagatcggt ttgtttatcc tatgttcgga aaaagtcagc attgcaaagg
      241 aatcatatac gataatgaac aacattttga aaataaagaa aaaaatttgc caactaactt
      301 tatttattta gaagataatg agagtaatct tcctttactt gtacaaactt atataaaaga
      361 aggtgaggat gcggagtatc acaaaagata taaatgcaaa ataagaaaac catggtataa
      421 agttccatcg gtttattcaa ctaacatagg aatgctgaaa agaagtcatg aagcaccaaa
      481 actaatattg aataaattgg gggcttatac taccgatact gcgtatcgta taaagtcaaa
      541 taaatttcaa gatgagattc ttgtgtgctg tttcctaaat ccattaacta tgattttatc
      601 tgagttaaat ggaaggtttt atggtggagg cgtattaga
//
LOCUS       DANLZQ010000220          602 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.221, whole genome shotgun sequence.
ACCESSION   DANLZQ010000220 DANLZQ010000000
VERSION     DANLZQ010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 602)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 602)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.221"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..>602
                     /locus_tag="PXE50_002657"
     CDS             <1..>602
                     /locus_tag="PXE50_002657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623491.1"
                     /translation="ELIKKSVKDCSRDREKISHCTLLNACSKALGFSGGFAGFQEDYL
                     SNLTQFMEKHGLLYLVDLTKQKYPVNDMCMTRSLALKKQDISERIFFSGKEIPKRIFT
                     GFNFRYDMHLANGFRIGNSLKTPYSDIGICEDINEALKNPSIKIDCRDGTIRSMADVV
                     IGRYLDKVLFYYFNLIGDQLVQPRLDKYEIQCYYPQGYQG"
BASE COUNT          218 a           78 c          111 g          195 t
ORIGIN      
        1 agaattaatt aaaaaatctg ttaaagattg ttctagagat agagaaaaaa tttctcactg
       61 tactttgtta aatgcttgct caaaagcttt aggattttct ggaggctttg cagggtttca
      121 agaagattat ttatctaatt tgacgcaatt catggaaaaa catgggctct tatatcttgt
      181 agatttaaca aaacaaaaat atccagtaaa tgatatgtgc atgacaagga gcttagctct
      241 gaaaaagcaa gatatatctg aaagaatttt ctttagcgga aaggaaatcc ctaagagaat
      301 atttactgga tttaatttcc gatatgatat gcatttagct aatggttttc gtatcggaaa
      361 ttccttaaaa accccatatt ctgacatagg tatatgtgaa gacataaatg aagcattaaa
      421 aaatccatca ataaaaattg attgccgtga tggcacaatc agaagtatgg cagatgtagt
      481 cataggtaga tatcttgata aagtattgtt ttattatttt aacttgatag gtgatcagtt
      541 agtccagcct agattggata aatatgaaat acaatgttat taccctcaag gttatcaagg
      601 gg
//
LOCUS       DANLZQ010000221          561 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.223, whole genome shotgun sequence.
ACCESSION   DANLZQ010000221 DANLZQ010000000
VERSION     DANLZQ010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 561)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 561)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.223"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
BASE COUNT          174 a           97 c          110 g          180 t
ORIGIN      
        1 caactacctc taaggatagc cgtcgcttct caggagttat gcgacttatt aagtgctgtt
       61 atatacagcg tcttaaattg aggataattt agtcatattg aatcataaag ttaattgaga
      121 attgaatttt gattttagag aattggaaat gacaacaccg ttgataaatc acttaccaac
      181 ggtgttgtac ttttgaagaa taaatgaaat ttaagttaga ccaatataag ttactatatt
      241 gaaaatagca gcaccttcgt gacaatgttg atattttcgt tcgtaattta cccgattacc
      301 ttgtggtctt taatcggcat atctgtggca tcatcgagga cacaaacggc accctttatt
      361 cacctgtggg ctcaggctaa gaaaagtgag caatgattgc aatgtcataa tatccccaag
      421 tcgggtaata ttatgacatt gcaatcacgc atgtgacaaa atacaacgga taaagtggct
      481 ggcattatcc atttattgtt taggtggcat tcctgtaatt ttacagagtt ccctttcaga
      541 atgctgggag acatttcggc t
//
LOCUS       DANLZQ010000222          503 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.225, whole genome shotgun sequence.
ACCESSION   DANLZQ010000222 DANLZQ010000000
VERSION     DANLZQ010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 503)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 503)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.225"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            192..497
                     /locus_tag="PXE50_002658"
     CDS             192..497
                     /locus_tag="PXE50_002658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623492.1"
                     /translation="MSKLNKLLSRKTSRKIIPEQVNFDINLPIYIPLFLSDKTAKIQA
                     VWELEQENGERDAGAVKRNRIQFRYLPEGVHKLTLIVGTPLLSKGSKVYQCLIKVNK"
BASE COUNT          178 a           64 c           87 g          174 t
ORIGIN      
        1 acaatttatg cattccaatt gtggtctaat caataaattt tgccgatata tcgataggaa
       61 gtagatgtaa ttacctaaag tttgatctag gttagttaaa tgggaggttt ttaactatta
      121 tttctaatac ttttatttta agctttacag taatgaatga gtttatttta cattttacaa
      181 aggaacattc tatgtctaag ttaaacaaat tattatcgag aaaaacatcg cgtaaaatta
      241 ttcctgagca agttaatttt gacattaact tgcctatcta tatcccgctg tttttatcag
      301 ataagacagc gaaaattcaa gcagtatggg agttagaaca agaaaatggt gagcgtgatg
      361 ctggcgctgt aaagcgaaat cgtattcagt ttagatactt gccagaaggg gtacataaat
      421 taacattaat tgttggtacg cctttattat caaaaggaag taaggtttat caatgcctaa
      481 ttaaagttaa taaataatat taa
//
LOCUS       DANLZQ010000223          459 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.226, whole genome shotgun sequence.
ACCESSION   DANLZQ010000223 DANLZQ010000000
VERSION     DANLZQ010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 459)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 459)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.226"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(<1..>459)
                     /locus_tag="PXE50_002659"
     CDS             complement(<1..>459)
                     /locus_tag="PXE50_002659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PcfJ domain-containing protein"
                     /protein_id="HDL5623493.1"
                     /translation="VHLSHLRVLFQDIEDYMIHEGYLHGIPQTWKHLVSHSEQWHQHI
                     LEEQRRDQHILEEQRRENDEAHQALLSTSWSSPIDICYINEIEFQPLTTGQMLFDEGQ
                     RMRHCIFTYIDICSEGRYLAFSVKIANESATLGLIKHRGNWKIEQFRYAC"
BASE COUNT          134 a           88 c           75 g          162 t
ORIGIN      
        1 ttacaggcat aacgaaattg ttcaattttc cagtttcctc tatgttttat taatcctaaa
       61 gtagctgatt cattggctat ttttacggag aaagctaagt atctcccctc tgagcagata
      121 tctatgtatg taaaaataca atgcctcata cgttgtcctt catcaaataa catttgtccc
      181 gtcgtcaaag gttgaaattc aatttcattg atatagcaaa tatcaattgg agatgaccaa
      241 gatgtagata aaagtgcttg gtgagcctca tcattttctc ttcgttgctc ttctaatatg
      301 tgttgatctc ttcgttgctc ttctaatatg tgttgatgcc attgttcgct atgtgaaacc
      361 aaatgtttcc aagtctgagg tataccatgt aaatatccct catgtatcat gtaatcttca
      421 atatcttgaa aaagcactct cagatgagaa agatgcacc
//
LOCUS       DANLZQ010000224          448 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.227, whole genome shotgun sequence.
ACCESSION   DANLZQ010000224 DANLZQ010000000
VERSION     DANLZQ010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 448)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 448)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.227"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            36..>448
                     /locus_tag="PXE50_002660"
     CDS             36..>448
                     /locus_tag="PXE50_002660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraI domain-containing protein"
                     /protein_id="HDL5623494.1"
                     /translation="MHSILKKILGKSKSSSQSSVKSDNVFAIEQDSEGWLYPKNASQL
                     LNTELRQKYLGLLWQQVSMNRQMFEALYQQPIERYAEMVQLLPASESHHHSHIGGMLD
                     HGLEVIAFSAKVRQNYILPPNVAPEEQSKQRDAWTA"
BASE COUNT          136 a          103 c           84 g          125 t
ORIGIN      
        1 ttcaacgcaa acatcatctt tttcggtcta tttcaatgca ctcaattctc aaaaaaattc
       61 ttggcaaaag taaatcctcg tctcaaagtt cggttaaatc tgacaatgtt ttcgctattg
      121 agcaggatag tgagggctgg ttatatccga aaaatgcctc ccaactactt aatacggaat
      181 tacgccaaaa atatctgggt ctactttggc aacaggtatc aatgaaccgt caaatgtttg
      241 aggcacttta tcaacagcca atagagcgtt atgccgaaat ggtgcaactg ttacccgctt
      301 ccgagtcaca tcatcattca catatcggcg gaatgctcga tcacggtttg gaagttattg
      361 ctttttcagc caaagtccgt caaaactata tattgccacc gaatgtcgca cctgaagaac
      421 aatctaagca acgagacgct tggactgc
//
LOCUS       DANLZQ010000225          442 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.228, whole genome shotgun sequence.
ACCESSION   DANLZQ010000225 DANLZQ010000000
VERSION     DANLZQ010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 442)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 442)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.228"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(47..427)
                     /locus_tag="PXE50_002661"
     CDS             complement(47..427)
                     /locus_tag="PXE50_002661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623495.1"
                     /translation="MNNKRIKPEQFADFITQRTGRNLTCPICNSQEHYLHDGYDTFTE
                     LCGEKIIGVPTIPYRIEPSPDEVMKFAAPEFHSLHFNEREGTKYWLDQKARTAVIVTC
                     VCCNNMLFFDRERILEWIKGSQNE"
BASE COUNT          129 a           85 c           75 g          153 t
ORIGIN      
        1 taaggatagt atgattgcat ctctaggatc attttgaatc attggtctat tcattttgtg
       61 agcccttaat ccattctaaa attctctctc tgtcgaaaaa aagcatatta ttacagcaaa
      121 cacaagtgac aataacggct gttctcgctt tttggtctaa ccaatatttt gttccttccc
      181 gttcattgaa atgcaaagaa tgaaattcag gagctgcaaa tttcataact tcatcaggag
      241 atggctctat tcggtatgga atggttggaa caccgataat tttctctccg cataattccg
      301 taaaagtgtc atagccatcg tgtaaataat gttcttggct attacaaata gggcaagtta
      361 aattccgccc agtacgttgc gtgataaaat ccgcaaactg ttcaggttta atgcgtttat
      421 tattcatttt aacttccttt ct
//
LOCUS       DANLZQ010000226          408 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.229, whole genome shotgun sequence.
ACCESSION   DANLZQ010000226 DANLZQ010000000
VERSION     DANLZQ010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 408)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 408)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.229"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            54..>408
                     /locus_tag="PXE50_002662"
     CDS             54..>408
                     /locus_tag="PXE50_002662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623496.1"
                     /translation="MGLFSRKRKNHTPKEAPETGRSKQIVNIVELLCEGEIEGLVDGF
                     KSIYLDGTQIQNDDGTYNFNNVSGQLNVGTQDQEVLEGYDSSQNEVSVGVEVKKKNGA
                     IVRTVTDERISRLRLT"
BASE COUNT          131 a           68 c          107 g          102 t
ORIGIN      
        1 ggctcgcttg tgatttcaca gggagttgag acgatgactg tagaggtata attatgggat
       61 tatttagtcg taagagaaaa aatcatactc ctaaagaagc accggaaacc ggtcgctcta
      121 aacagattgt aaatattgtg gaattgctgt gcgagggcga aattgaaggc ttggtagatg
      181 gctttaaatc gatttactta gacggcacgc agatccaaaa cgatgacggc acctataatt
      241 ttaataatgt gagcggtcag ctaaatgtcg gtacgcaaga tcaagaggta ttagaaggtt
      301 acgacagctc acaaaatgaa gtgagtgtgg gtgtagaagt caagaaaaaa aacggtgcaa
      361 tcgtccgcac cgttactgat gaacgcatca gccgtttgcg tttaacgt
//
LOCUS       DANLZQ010000227          402 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.230, whole genome shotgun sequence.
ACCESSION   DANLZQ010000227 DANLZQ010000000
VERSION     DANLZQ010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 402)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 402)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.230"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(5..>402)
                     /locus_tag="PXE50_002663"
     CDS             complement(5..>402)
                     /locus_tag="PXE50_002663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF945 family protein"
                     /protein_id="HDL5623497.1"
                     /translation="GKVDLALLLNMAQFDPQNLGNMQAVLQALSTSKFTSNINRQYAE
                     DIIRQVSIVTEKLGEEEAKAFAKQQVDAVFLNAGVEQYGLRKVDDNNVKIELTIDNGK
                     VNLNGRELTEDELQMALFMIVMGAGSLGQ"
BASE COUNT          106 a           88 c           65 g          143 t
ORIGIN      
        1 atgattattg cccgagtgag cctgctccca tcacaatcat aaacagagcc atttgaagtt
       61 catcttcggt cagttcacgt ccgtttaaat tcacttttcc gttatctata gttaattcaa
      121 tcttcacatt gttgtcatct acttttctta atccgtactg ttcaactccc gcattgagaa
      181 aaacagcatc aacttgttgc ttggcaaatg ctttcgcctc ttcttcgcct aatttttctg
      241 taactattga gacttggcga ataatatctt ccgcatattg acggttgata tttgaagtga
      301 atttacttgt tgaaagggct tgcaataccg cttgcatatt accaagattt tgtgggtcaa
      361 attgagccat attcagtaat aaagccaaat caactttgcc tt
//
LOCUS       DANLZQ010000228          400 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.231, whole genome shotgun sequence.
ACCESSION   DANLZQ010000228 DANLZQ010000000
VERSION     DANLZQ010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 400)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 400)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.231"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
BASE COUNT          142 a           59 c           75 g          124 t
ORIGIN      
        1 agatttaagc acaaaaaaat aaaaaaatct gagagatttg tcacaattat tgaaaaaagt
       61 gatatttttt aaatatcacc gaagcccaag ctttgtatca aggtttcatc ttaatgttag
      121 tgataaaagt gactttttct gaactttggt gtaaaaaata taagagctgt aacaaaaagg
      181 ccgccaggca ataacctaac ggcattacaa gcggtcatat ttggcggaaa atttgctagg
      241 ctacttaaaa tttgcgatat gaaatgttta gtgccattga gctaaaacaa caaaaaagcc
      301 tgtaaacgtt gattttacag gctttctaag gttttttcgt ttagctctgt tgaactaaat
      361 ttagtcaaat ggtgcctggt cgagacttga acttaatggc
//
LOCUS       DANLZQ010000229          397 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.232, whole genome shotgun sequence.
ACCESSION   DANLZQ010000229 DANLZQ010000000
VERSION     DANLZQ010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 397)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 397)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.232"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(<1..>397)
                     /locus_tag="PXE50_002664"
     CDS             complement(<1..>397)
                     /locus_tag="PXE50_002664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDL5623498.1"
                     /translation="AINLSSGEYIARMDADDISLPTRLSEQILYLEENHLDLCGCNAL
                     LFSEHGNLGLTNKLNSHEALEKLMVAGDIGIIHPTFLARRKVFVESGGYNPLALHAED
                     MEFIAHILSMGFRLGNNPKVLFKYRFSTNS"
BASE COUNT          140 a           79 c           53 g          125 t
ORIGIN      
        1 gctatttgta gaaaacctat atttgaataa taccttagga ttattcccta atctaaatcc
       61 cattgataaa atatgggcaa taaattccat atcttccgca tgtaaagcta agggattata
      121 ccctccagat tcaacaaata cttttctcct tgctaaaaaa gtagggtgaa ttattccaat
      181 atcaccagcc accataagct tttctaaagc ctcatgacta ttcaacttat ttgtaagacc
      241 aaggttgcca tgttcagaaa aaagcaaagc attacaaccg cataagtcta aatggttttc
      301 ttctaaatat aaaatttgct ctgacaatct agtaggtaaa gatatatcat cagcatccat
      361 tctcgctata tattcaccag aggataagtt tatagct
//
LOCUS       DANLZQ010000230          392 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.233, whole genome shotgun sequence.
ACCESSION   DANLZQ010000230 DANLZQ010000000
VERSION     DANLZQ010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 392)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 392)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.233"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..>392
                     /locus_tag="PXE50_002665"
     CDS             <1..>392
                     /locus_tag="PXE50_002665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623499.1"
                     /translation="IIQILNSSELSLFNGKVLVLTGQAGSGKSHLLGDFVQKRQNSGK
                     YSLLLLGQDFTEKSNAWNQILSKQLNLNITPEVFLSALDSIGEMQKERVILAIDALNE
                     GEGKSLWNNQLNGLIELVSQYPNIGLVL"
BASE COUNT          135 a           52 c           74 g          131 t
ORIGIN      
        1 acattattca gattttaaat tcatctgaat tatcattatt taatggtaaa gtgcttgttt
       61 taactggtca agctggtagt ggaaaatctc atttattggg tgattttgtc caaaaaagac
      121 aaaattctgg aaagtattct ttgttgttat tggggcagga ttttacagaa aaatccaatg
      181 cttggaatca aatcttatcc aaacaattaa atcttaatat cacacccgaa gtatttttat
      241 ccgcattaga tagtatcgga gaaatgcaaa aagaacgggt tattttagcc atagacgcct
      301 taaatgaggg tgaagggaaa tcattatgga ataaccaact taatggatta attgagttgg
      361 taagtcaata tccaaatatt ggactggttc tg
//
LOCUS       DANLZQ010000231          359 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.234, whole genome shotgun sequence.
ACCESSION   DANLZQ010000231 DANLZQ010000000
VERSION     DANLZQ010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 359)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 359)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.234"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..308
                     /locus_tag="PXE50_002666"
     CDS             <1..308
                     /locus_tag="PXE50_002666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF883 domain-containing protein"
                     /protein_id="HDL5623500.1"
                     /translation="KSLDAKREELTNEIRDILKNAEELFNETSDSSTEEYKKLKDKLA
                     KQFDDVKDRFATLKDDTVDSARTVVKQTDTLVQDNPYKAITVAGVVGLLLGVLISRR"
BASE COUNT          132 a           46 c           72 g          109 t
ORIGIN      
        1 ctaaaagctt agatgcaaaa cgtgaagagt taacaaacga gattcgcgat attttgaaaa
       61 atgcagagga attatttaat gaaacatctg attcttctac ggaggaatat aaaaagttaa
      121 aagataaatt agcaaaacag tttgatgatg taaaagatcg ttttgcaaca ttaaaagatg
      181 ataccgttga tagtgcaaga actgtagtta aacaaactga taccttagtt caagataatc
      241 cgtataaagc aattaccgtt gccggtgtgg tagggttatt attaggtgtt ttaatttcta
      301 gaagataatt atctgtaatt cgtcattaag tcattaagcc acgccatatt tggggtggc
//
LOCUS       DANLZQ010000232          359 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.235, whole genome shotgun sequence.
ACCESSION   DANLZQ010000232 DANLZQ010000000
VERSION     DANLZQ010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 359)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 359)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.235"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(<1..>359)
                     /locus_tag="PXE50_002667"
     CDS             complement(<1..>359)
                     /locus_tag="PXE50_002667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS1595-like element ISMha2 family transposase"
                     /protein_id="HDL5623501.1"
                     /translation="HKLIELFVAGVTARTAAELVNVNKTTAAYYFHRLRLLIYQHSPH
                     LEMFEGEIEADESYFGGARKGKRGCGAAGKTAVFGLLKRDDKVYTVVVPNTQSATLLP
                     IIREKVKPDSLVYADFY"
BASE COUNT           99 a           88 c           76 g           96 t
ORIGIN      
        1 gataaaaatc ggcgtaaaca aggctgtctg gcttcacttt ctcccgaata atcggcaaaa
       61 gtgtggcaga ttgcgtattt ggtacgacaa cggtataaac cttgtcatca cgttttaaca
      121 gcccaaatac ggcagttttg cctgcggcac cacaccctcg tttacctttg cgagcaccac
      181 cgaaataact ttcgtccgct tcaatttcac cctcaaacat ttccagatga gggctatgtt
      241 gatagatgag caatcgcaaa cggtgaaagt aataggcagc ggtggttttg tttacattca
      301 ccaactcagc cgctgttcga gcagtgacac ctgctacaaa cagttcaatg agtttatgt
//
LOCUS       DANLZQ010000233          358 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.236, whole genome shotgun sequence.
ACCESSION   DANLZQ010000233 DANLZQ010000000
VERSION     DANLZQ010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 358)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 358)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.236"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
BASE COUNT          129 a           54 c           61 g          114 t
ORIGIN      
        1 gtattatata aaatagcaaa tgaatacccg aatctactac cattattagc ctatgttaaa
       61 cctgagtact ggaaatgctc agacttattt agttatcaaa attgggtaag aagcagtgat
      121 aaacagccct ttattttgta tgctaaatac caagataaga tgttatgtga atcaaagggt
      181 caatggagat ggttaaaaaa acagtcgaga atagttgtag atcaatgttt tctacatgtt
      241 aatcaatggc agttactaac agaaattcaa attcccttca agatcccagt atgtgtcata
      301 tgtttcattc ttactaattt tagtatgatc agcagtgaat tagaacgttc tagacaac
//
LOCUS       DANLZQ010000234          346 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.238, whole genome shotgun sequence.
ACCESSION   DANLZQ010000234 DANLZQ010000000
VERSION     DANLZQ010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 346)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 346)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.238"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(<1..297)
                     /locus_tag="PXE50_002668"
     CDS             complement(<1..297)
                     /locus_tag="PXE50_002668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5623502.1"
                     /translation="MKLNNISKLLVFGFFGSLFFERSLWMIYLHGKGFTISEISFFQI
                     GLNVSMFIFEIPSGFISDRFGRKSAMLLGSAFTIIYFMGMLFANSAFSIFLFFVI"
BASE COUNT          153 a           62 c           33 g           98 t
ORIGIN      
        1 aataacaaag aataaaaata tagaaaaagc agaatttgca aataacatcc ccataaaata
       61 aattatagtg aacgcactac ctaataacat agcactttta cgaccaaatc tatcagaaat
      121 aaaaccagat gggatttcaa aaataaacat tgatacattt agaccgattt ggaaaaatga
      181 tatttctgat atcgtaaacc cttttccatg caagtatatc atccacaggc ttctttcaaa
      241 gaataaactt ccaaaaaaac caaaaacaag caattttgat atattattta atttcataga
      301 taaacctttt catatcatat aactctagac attcccgtat aaaatc
//
LOCUS       DANLZQ010000235          346 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.239, whole genome shotgun sequence.
ACCESSION   DANLZQ010000235 DANLZQ010000000
VERSION     DANLZQ010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 346)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 346)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.239"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..>346
                     /locus_tag="PXE50_002669"
     CDS             <1..>346
                     /locus_tag="PXE50_002669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623503.1"
                     /translation="QNNQGDTNTTNVDLKITIGTRQYSHSFNGKYSSQYLESVVFDNL
                     PPVPFNISVERLTEDSNSQRLQNGTIWSSYTEIIDTEFTYPNSAVAGISFDSEYFNNI
                     PTRNYLIKAKKVK"
BASE COUNT          114 a           77 c           62 g           93 t
ORIGIN      
        1 tcaaaataat caaggcgata ccaataccac caatgttgat ttaaaaatca cgattggcac
       61 acggcaatat tcgcatagct ttaacggcaa atacagctcg caataccttg aatctgtggt
      121 gtttgataac ctgccgcctg tgccatttaa tatctcagtt gagcgtctaa ccgaggatag
      181 caattcgcaa cgcttacaaa acggtacaat ttggagtagt tacaccgaaa ttatcgatac
      241 cgagtttacc taccctaatt cagcggttgc cggtatcagt tttgattcgg agtattttaa
      301 taatatcccg acccgaaact acctaattaa agcgaaaaaa gtcaaa
//
LOCUS       DANLZQ010000236          346 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.240, whole genome shotgun sequence.
ACCESSION   DANLZQ010000236 DANLZQ010000000
VERSION     DANLZQ010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 346)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 346)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.240"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..>346
                     /locus_tag="PXE50_002670"
     CDS             <1..>346
                     /locus_tag="PXE50_002670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623504.1"
                     /translation="QNNQGDTNTTNVDLKITIGTRQYSHSFNGKYSSQYLESVVFDNL
                     PSVPFNISVERVTEDSNSQRLQNGTIWSSYTEIIDTEFTYPNSAVAGISFDSEYFNNI
                     PTRNYLIKAKKVK"
BASE COUNT          117 a           76 c           61 g           92 t
ORIGIN      
        1 tcaaaataat caaggcgata ccaataccac caatgttgat ttaaaaatca cgattggcac
       61 acggcaatat tcgcatagct ttaacggcaa atacagctcg caataccttg aatctgtggt
      121 gtttgataac ctgccgtctg taccgtttaa tatctcggtt gaacgtgtaa cagaggatag
      181 caattctcaa cgactacaaa acggtacaat ttggagcagc tataccgaaa ttatcgacac
      241 cgaatttact taccctaatt cagcggttgc cggtatcagc tttgattcgg agtattttaa
      301 taatatcccg acccgaaact acctaattaa agcgaaaaaa gtcaaa
//
LOCUS       DANLZQ010000237          341 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.241, whole genome shotgun sequence.
ACCESSION   DANLZQ010000237 DANLZQ010000000
VERSION     DANLZQ010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 341)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 341)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.241"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(<1..>341)
                     /locus_tag="PXE50_002671"
     CDS             complement(<1..>341)
                     /locus_tag="PXE50_002671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5623505.1"
                     /translation="QMLKLMEEFGELCGGIARNNPEMIKDAIGDLIVVCIIKAKQEKQ
                     PIYPVQFENHRLNGYRFDISVAVHCLYDIERIKDRGKYSRFFGILHHLALINRFTLND
                     CLAHAYDQIKDR"
BASE COUNT          104 a           64 c           60 g          113 t
ORIGIN      
        1 cgatctttga tttggtcgta ggcgtgagcg aggcagtcat taagcgtaaa tctatttatt
       61 aaggctaaat ggtgtaatat gccaaaaaaa cggctatatt tacctctgtc tttaatgcgt
      121 tcaatatcat atagacaatg aacagcgacc gaaatatcaa atctgtaacc atttaatcta
      181 tgattttcaa attgtacagg gtaaataggt tgtttttctt gttttgcttt aataatacag
      241 acaacaatca aatccccaat cgcatcttta atcatttcag gattattgcg ggcaatgcct
      301 ccgcagagtt cgccaaactc ttccatcagt ttgagcattt g
//
LOCUS       DANLZQ010000238          339 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.242, whole genome shotgun sequence.
ACCESSION   DANLZQ010000238 DANLZQ010000000
VERSION     DANLZQ010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 339)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 339)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.242"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..>339
                     /locus_tag="PXE50_002672"
     CDS             <1..>339
                     /locus_tag="PXE50_002672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL5623506.1"
                     /translation="AGQERCIADEVPFEIPQNWIWVRLENYSLNHDRRRKPVSVAQRS
                     QQNKLYDYYGATGAIDKVASYIFDGKFILIGEDGGNFFTKKDVAFIVEGKFRANNHVH
                     VLSVDFNLEKY"
BASE COUNT          116 a           37 c           77 g          109 t
ORIGIN      
        1 gcaggtcagg aacggtgtat cgccgatgaa gtgccatttg agattcctca aaattggatt
       61 tgggtgaggt tggaaaatta ttctttaaat catgatagaa gaagaaaacc agtatcagtt
      121 gcacagcgta gccaacaaaa taaattgtat gactattatg gagcgactgg agcaatagat
      181 aaagtggcaa gctatatttt tgatggtaag tttattttaa ttggagaaga tggaggtaat
      241 ttcttcacta aaaaagacgt tgcttttatt gttgaaggta aatttagggc aaataatcat
      301 gttcatgtat tatcagttga ttttaatttg gaaaaatat
//
LOCUS       DANLZQ010000239          338 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.243, whole genome shotgun sequence.
ACCESSION   DANLZQ010000239 DANLZQ010000000
VERSION     DANLZQ010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.243"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..>338
                     /locus_tag="PXE50_002673"
     CDS             <1..>338
                     /locus_tag="PXE50_002673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5623507.1"
                     /translation="AVDSLSIGARNLLIDSTYNQHINYNTKMSSITRTVYRGNMLIRL
                     GMLGGAGVAGIVQAPAAQVSNIRQGQEYTLSLNVQGTAGIQKTGLNYVFLMRADGANQ
                     RLATIPVIAS"
BASE COUNT          104 a           79 c           76 g           79 t
ORIGIN      
        1 ctgccgttga ttcactttct atcggtgcaa ggaacttact gatagacagt acttacaacc
       61 aacacatcaa ctacaataca aaaatgtcat caatcacacg cacagtctat cgcggcaata
      121 tgttgatacg actcggaatg cttggtggcg caggtgtggc cggtattgta caagcaccag
      181 ccgctcaagt aagtaatatc agacagggtc aagagtacac acttagcctg aatgtacagg
      241 gtacagccgg catacaaaaa acggggctca actatgtatt cttgatgcgt gctgatgggg
      301 ctaatcaacg gttagcaaca atacctgtta tagccagc
//
LOCUS       DANLZQ010000240          327 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.244, whole genome shotgun sequence.
ACCESSION   DANLZQ010000240 DANLZQ010000000
VERSION     DANLZQ010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 327)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 327)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.244"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            complement(90..>327)
                     /locus_tag="PXE50_002674"
     CDS             complement(90..>327)
                     /locus_tag="PXE50_002674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL5623508.1"
                     /translation="DLRHSHVAYLIEQGFSPVVIAERLGHESISITLNYAHLYLGRDK
                     TEKKESVIGAIKKHKRKIDKTIEQSHSMSNDMEL"
BASE COUNT           98 a           61 c           38 g          130 t
ORIGIN      
        1 tgttttttct atatttttgg ctaaaaacat gatgctaatt gcttcaaaaa aatggagagt
       61 atcaaattta taatactctc catgtatctc tatagctcca tatcgttact catactatga
      121 ctctgctcaa ttgttttatc tattttcctt ttatgtttct taattgctcc aataactgat
      181 tcctttttct ctgttttatc cctaccaaga tataaatgtg catagtttaa ggttattgag
      241 atactttcat gacctaatct ttctgcaatt accacaggag aaaatccttg ctctatcaaa
      301 taagcaacat gagaatgtct taaatca
//
LOCUS       DANLZQ010000241          320 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.245, whole genome shotgun sequence.
ACCESSION   DANLZQ010000241 DANLZQ010000000
VERSION     DANLZQ010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 320)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 320)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.245"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..>320
                     /locus_tag="PXE50_002675"
     CDS             <1..>320
                     /locus_tag="PXE50_002675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HDL5623509.1"
                     /translation="PYNSRQYCDAYHLLENVARWEKPKVYGVARKMDRTSLKSDYCMI
                     AATKAFEELIENADAKYILLSYNNMSDKGNDRSNAKISDEDIMKILSKKGKVIVFESD
                     YKSF"
BASE COUNT          123 a           34 c           64 g           99 t
ORIGIN      
        1 tccatataat tcaagacaat attgtgatgc atatcattta cttgaaaatg tggcacgatg
       61 ggaaaaacct aaagtttatg gtgttgcaag aaagatggat agaacttcgc ttaaaagtga
      121 ttattgtatg attgcagcta caaaagcatt tgaggagctt attgaaaatg ctgatgcaaa
      181 atatattttg ctttcatata acaatatgtc agacaaggga aatgatagat ccaatgcgaa
      241 aatatcggat gaagatatta tgaaaattct tagcaaaaag ggaaaagtaa ttgtatttga
      301 atcggattat aagagttttt
//
LOCUS       DANLZQ010000242          315 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.246, whole genome shotgun sequence.
ACCESSION   DANLZQ010000242 DANLZQ010000000
VERSION     DANLZQ010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 315)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 315)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.246"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..>315
                     /locus_tag="PXE50_002676"
     CDS             <1..>315
                     /locus_tag="PXE50_002676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011150324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS481 family transposase"
                     /protein_id="HDL5623510.1"
                     /translation="IFISAGGVRSIWLRHNLANFKQRLNALEKAVAEKGIILSENQVQ
                     ALERKKEDDVACGEIETAHPGYLGSQDTFYVGNLKGVGRIYQQTFIDTYSKVAFAKLY
                     TMK"
BASE COUNT           95 a           53 c           76 g           91 t
ORIGIN      
        1 atttttattt cagcaggtgg tgtgcgttct atttggctac gccataatct cgctaacttt
       61 aaacagcgtt taaatgcgtt agaaaaagca gtggctgaga aaggcattat tctgagtgaa
      121 aaccaagttc aagccttgga gcgtaaaaaa gaagacgatg tggcttgtgg cgaaattgaa
      181 acggctcatc cgggctatct aggttcacaa gataccttct atgtggggaa tcttaagggg
      241 gttggacgca tttatcaaca gacctttatt gatacttata gtaaagtcgc atttgcaaaa
      301 ctgtatacga tgaag
//
LOCUS       DANLZQ010000243          310 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.denovo.247, whole genome shotgun sequence.
ACCESSION   DANLZQ010000243 DANLZQ010000000
VERSION     DANLZQ010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 310)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 310)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.denovo.247"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
BASE COUNT          113 a           53 c           42 g          102 t
ORIGIN      
        1 ctcctatcta aacacattcc acatttgaaa atcatagagg ctctcttcat taaacgcatt
       61 tctaaagttt tcattagtac aataatgaaa aaatgccgaa gtaggttgct caatacatcc
      121 ataaagacta tgggacttga gatgagtgat aaactcgtta tgtttataga attctctata
      181 taaactcaaa agctcatcat ctttttggct caaattgcca ttttggaaat aaaaaccaaa
      241 ttgactgagt tttatacata gattatttgt gatgtttaat acatcaaaaa atccagcctt
      301 ataaatcagg
//
LOCUS       DANLZQ010000244         5039 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596884-rid16721583.guided.136, whole genome shotgun sequence.
ACCESSION   DANLZQ010000244 DANLZQ010000000
VERSION     DANLZQ010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596884
            Sequence Read Archive: SRR17858469
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5039)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5039)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574527.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574527.1
            Genome Coverage       :: 100x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/12/2023 23:09:51
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,681
            CDSs (total)                      :: 2,632
            Genes (coding)                    :: 2,569
            CDSs (with protein)               :: 2,569
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 15 of 63
            Pseudo Genes (internal stop)      :: 10 of 63
            Pseudo Genes (multiple problems)  :: 1 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5039
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596884-rid16721583.guided.136"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: AL"
                     /collection_date="2019-02-08"
                     /collected_by="Auburn University Bacteriology and Mycology
                     Diagnostic Laboratory, Auburn, AL"
     gene            <1..650
                     /locus_tag="PXE50_002677"
     CDS             <1..650
                     /locus_tag="PXE50_002677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="colicin transporter"
                     /protein_id="HDL5623511.1"
                     /translation="KAAKEKAEAERLAAEKEVDPIAIIKAKGIDDTNYGLKLGNSKET
                     IEGKVTVRTQSYLYNQPYSVVTAQAVQRNGWENGNYIDKVDGTVTVKGLKTEKLPTEG
                     TATYSGKAFNHDGAKGFNGGDLTYNVNFSKRTGSGRVEGEFGNLIVLEEGTINNTQIS
                     STVHGNNPLNLSGKYTVEFFGKNAEEIAGEIQTKANLTGEVSNFGLAGTRGDIQK"
     gene            846..2255
                     /locus_tag="PXE50_002678"
     CDS             846..2255
                     /locus_tag="PXE50_002678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HDL5623512.1"
                     /translation="MKKYPLLFSLFSPVVWAEKVIEHNTDPISFERQPQAVKFEQNVV
                     KNSQKPTAYQPAYSVNQNVEQQINQAILSQDWATLEPLLSRYPQTENFDPLLWHYAQA
                     ALAYAKKDHQTAVFHYRQLLAKPPSLVYPRFDLALILAEDQQFRAAEQEFKAIQAHLP
                     PELAKIARNTQVQIAENEAWQPDFYLQYTQTDNVNNASSSPIVNVNGRIFRKNADSLP
                     QSAKGVRYGLGLSKLHNVKGNHFVGLTLNYSGIYYWDNRDYREQSVSVSPNYSYRTVA
                     YRLTFSPFIEQNWLGSSRYNVQFGATLNGLRYLNSQWLVSGSFTHLQKRYFEELTASR
                     YNSYQHQLSGGVQWQAVKNGRFFANLDGVREIAREKAQSSNKWLARVGAVFQGERWAT
                     QASIGFGKRYFADKHYLFGYKRLDTEYQANLAVWNRTWHWQGIVPKLNFRYQKIDSNI
                     ADFYSRQNKEVFFTLEKLF"
     gene            2401..2874
                     /gene="gpt"
                     /locus_tag="PXE50_002679"
     CDS             2401..2874
                     /gene="gpt"
                     /locus_tag="PXE50_002679"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HDL5623513.1"
                     /translation="MSEKYTNEKYVVTWDMFHMHARKLAENLLPATQWKGIIAVSRGG
                     LFPAAVLARELGIRHVETVCIASYDHDSQGELNVLHAADTDGEGFIVVDDLVDTGNTA
                     KEIRRMYPKARFVTVFAKPHGAPLVDDYVIDIPQETWIEQPWDLGITFVQPLARR"
     gene            2987..3610
                     /gene="gmk"
                     /locus_tag="PXE50_002680"
     CDS             2987..3610
                     /gene="gmk"
                     /locus_tag="PXE50_002680"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HDL5623514.1"
                     /translation="MSLGNLYIISAPSGAGKSSLINALLADLPRSEVQLSISHTTRQP
                     RPAEQDGVHYYFTSHDEFKQLIEQGYFLEWAEVFGNYYGTSLPMIERSLEQGIDVFLD
                     IDWQGARQIREKVPNVKTVFILPPSKTELEKRLIGRGQDSAETIAKRMAEAVSEMNHY
                     NEFDYVIINDDFQQALAELKAILIAERLSLGSQQIRHQHLITDLLNN"
     gene            3700..>5039
                     /locus_tag="PXE50_002681"
     CDS             3700..>5039
                     /locus_tag="PXE50_002681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HDL5623515.1"
                     /translation="MKLSKLAFSVALALTVTACTTGNMSNDGTLQQAQQTYQSYDEIT
                     KQYQINEQWWQGYTDAELNRVVDLAIKNNLDLAKSGIAVNKALYNANLVGANLVPTFS
                     GSGSVSAAKGLGSASSNNVSTGVSTTAAQAAFNLSYTVDLWRRLADTASAAEWTHKAT
                     IEDLKATRLSIINAVVTTYYQLAYYRDAIRITEESIRHYEQISRILTNKMNAGAIDSL
                     AVDQAQQAVLNARNSVIDLKTNQKIAEQTLRNLLNVQPNTPLNIRYPNIMSVKLQGVD
                     LNVPVSAIANRPDVVGSLQRLQSAFKTLTATEKSWFPTLTIGGSITGSATNIGNVADN
                     PVGNGLIKLDLPFLDWNRVKNNVKISETDYVTARLNYEQKITSALNEIDRYYYSYTQS
                     RSSLKILQDTNAKNKRISSYYKNRYEQGVSEFREWITALNTELNSQLAILNAKYA"
BASE COUNT         1536 a          961 c         1128 g         1414 t
ORIGIN      
        1 aaaaagcggc gaaagagaaa gcggaagcgg agcgtttagc agcagaaaaa gaagtagatc
       61 ctatagctat tattaaagca aaaggtattg atgatacaaa ttacggctta aaacttggta
      121 atagtaaaga aactattgag ggtaaagtca cagtcagaac acagagttat ttatataatc
      181 agccatattc tgtagtaaca gcacaagcag ttcaaagaaa tggctgggaa aacggtaatt
      241 atattgataa agttgatgga acagttacag ttaaaggatt gaaaacagag aaattaccaa
      301 cagagggtac tgcaacatat tcaggaaaag catttaacca cgatggagct aaaggtttta
      361 atggtggtga tctaacctat aatgttaatt tctctaagcg taccggttca ggtagagttg
      421 agggagaatt tggaaactta atcgtattag aagaggggac gattaataat actcagattt
      481 cttcaacagt acatggcaat aatcctttaa acctttctgg aaaatataca gtcgaatttt
      541 tcggtaaaaa tgcagaggaa attgccggtg aaattcagac aaaagcaaat cttactgggg
      601 aagtgagtaa ttttggactt gccggcactc gtggcgatat ccaaaaataa ccttttctaa
      661 cgttcaatgc cgtttaacga aaaattaaac ggcatttgtc ttgatattgc ttgtagatac
      721 cataagacac aatagtttag atttcaattt acagcttcta ataaccctct cccacaaggg
      781 gagagagtga taaatcccgt agaggcgaac atataggtcc gcccctacca attttcttta
      841 tctttatgaa aaaatatccc cttttatttt cgctgttcag ccccgttgta tgggcagaaa
      901 aggtgattga acacaacact gacccgattt cctttgagcg tcagccgcaa gcggttaaat
      961 ttgagcaaaa tgttgtaaaa aattcacaaa aaccgaccgc ttatcagcct gcgtattcag
     1021 tcaatcagaa tgttgaacag caaattaacc aagcgattct cagccaagat tgggcaacgc
     1081 ttgaaccgct tttaagccgt tatccgcaaa ctgaaaattt tgacccgttg ttgtggcact
     1141 atgcgcaagc cgcacttgcc tatgcgaaaa aagatcatca aaccgcagtt tttcactatc
     1201 gccaactgtt agctaagccc ccgagtttgg tttaccctcg ttttgatttg gcgttgattt
     1261 tggcagaaga tcagcaattt cgtgcggcag agcaggaatt taaggctatt caagcccatt
     1321 taccgccgga acttgctaaa attgcccgca atactcaagt ccaaattgct gaaaatgagg
     1381 cgtggcagcc cgatttttat ctgcaatata cccaaacaga taacgtgaat aatgcctcat
     1441 cttcgccgat tgtgaatgta aatgggcgga ttttccgcaa aaatgcagac agtttgccac
     1501 aatcagcaaa aggcgtgcgt tatggcttag ggttgagtaa attgcacaac gtgaaaggca
     1561 atcattttgt cggtttaacg ctcaattata gcgggattta ctattgggat aaccgagatt
     1621 accgtgagca atccgtatcc gtttcgccga attatagcta ccgcaccgtc gcttatcggc
     1681 tgactttttc gccttttatt gagcaaaatt ggctggggag tagccgttat aatgttcaat
     1741 ttggggcaac actcaacggt ttgcgttacc ttaattcgca atggttggtg tcggggagtt
     1801 ttacccattt gcaaaaacgg tattttgagg agctaaccgc aagccgttat aacagctatc
     1861 agcaccaact cagtggcggt gtgcagtggc aagcggtcaa aaatgggcgg ttttttgcaa
     1921 atttagacgg cgtgcgtgaa attgcacggg aaaaagcaca aagctcgaat aagtggctgg
     1981 ctcgagtggg ggcggttttt caaggcgaac gctgggcaac gcaggcaagt atcggctttg
     2041 gcaagcgata ttttgccgac aagcactatt tgtttggcta taagcggtta gacacggaat
     2101 atcaagccaa tttagcggtt tggaaccgca cttggcattg gcagggcatt gtgccgaagc
     2161 tgaatttccg ttatcaaaaa attgacagca atattgctga tttttactct cgccaaaaca
     2221 aggaagtctt tttcacttta gaaaagctat tttagtgttg gttttttgtg ctaagcatac
     2281 gattgcgtag ctgccggcac aaaaaaataa atgaaatgat ggcgaaaaaa gcattttcgg
     2341 gttatcctag tgcaattttt tatatcgggg tagcccccaa ttttatatta ggttgtttct
     2401 atgagtgaaa aatacacaaa tgaaaaatat gtcgtgacgt gggatatgtt ccatatgcac
     2461 gctcgcaagt tggcagaaaa tttattacct gccacacagt ggaaagggat tattgcggtg
     2521 agccgtggcg gcttgtttcc ggcagccgtt ttagcacgtg agttgggtat tcgccacgta
     2581 gaaacagtgt gcattgccag ctacgatcac gatagccaag gtgagttaaa tgtgttacac
     2641 gcagccgata ccgatggcga aggctttatt gtggtagatg atttagtgga taccggcaac
     2701 acggcaaaag aaattcgcag aatgtacccg aaagctcgtt ttgtaaccgt gtttgcgaaa
     2761 ccgcacggtg caccgttggt tgatgattat gtgattgata ttccacaaga aacgtggatt
     2821 gagcagcctt gggatttagg cattaccttc gttcagcctt tggcacgtag ataattttgt
     2881 gtaatggaca atgaaagttg tccattattt tttatttatt cctatgaaat gtaggggcga
     2941 atcatcattc gccctattcc caaaatcaaa taggtatata caaataatga gtttaggcaa
     3001 tctttatatt atttctgccc caagtggagc aggaaaatct tccttaatta acgccttgtt
     3061 ggcggattta ccccgttcgg aagtacagct ttcgatttca cacactaccc gtcagcctcg
     3121 tccggcagaa caggacggcg tgcattatta tttcacttcg cacgatgagt ttaagcagct
     3181 gattgagcaa gggtattttt tagaatgggc ggaggtgttt ggcaattatt acggcacatc
     3241 attgccgatg attgaacgta gcctagagca gggcattgat gtctttttgg atattgactg
     3301 gcaaggggct agacaaattc gggaaaaagt gccgaatgtg aaaaccgttt ttattttgcc
     3361 accgtcaaaa acagaattgg aaaaacgttt aatcgggcgt gggcaagatt ccgctgaaac
     3421 cattgccaaa cgtatggcag aggcggtgtc ggaaatgaac cattacaatg agttcgatta
     3481 tgtgattatt aatgatgatt tccaacaggc attggcagag ctaaaagcga ttttaattgc
     3541 cgagcgtttg agcttaggtt cgcaacaaat tcgtcatcag catttgatta ctgatttgtt
     3601 aaataattaa atgaacagtt gttcatttaa ctggaaaggc aatctgtttt tgggtagaat
     3661 acgcccattt tcccctcttt attttcaaaa ggaaatgtaa tgaaactttc aaaattagca
     3721 ttttctgtgg cgttggctct aaccgtaacg gcttgtacca cagggaatat gagcaatgac
     3781 gggactttgc aacaagcaca gcaaacctat caaagctatg atgaaattac caaacaatat
     3841 caaattaacg agcaatggtg gcaaggctat acggatgcgg aattaaaccg tgtggttgat
     3901 ttagccatca aaaataacct tgatttagcc aaaagcggaa ttgcagtcaa taaagccttg
     3961 tataacgcta atttagtagg ggcaaattta gtgccaacct ttagtggttc aggttctgtt
     4021 tctgcggcta aaggtttagg ttcggcttct tcaaataatg tttcgaccgg tgtttcaaca
     4081 accgcagctc aagctgcatt taatttaagt tatactgtgg atttatggcg acgtttagcc
     4141 gataccgcca gtgcggcaga atggacgcat aaagccacca ttgaagactt aaaagctacc
     4201 cgtttatcta ttattaatgc ggttgtgact acttactacc agttagctta ctatcgtgat
     4261 gcgattcgta ttaccgaaga gagcattcgc cattatgagc aaatcagccg tattttaact
     4321 aacaaaatga atgccggtgc gattgatagt ttagcggttg atcaggctca acaagcggtc
     4381 ttaaacgcca gaaatagtgt aattgatctg aaaaccaacc aaaaaattgc cgagcaaaca
     4441 ttacgcaatt tgttaaatgt tcagccaaat actccgctta acattcgtta cccgaatatt
     4501 atgagcgtga aattgcaagg ggtagattta aatgtgccag tgtcagccat tgctaatcgc
     4561 cctgatgtag taggctcgtt acaacgctta caaagtgcat ttaaaacctt aaccgcaacc
     4621 gagaaaagct ggttcccaac cttaaccatc ggtggttcta ttaccggtag tgcaaccaat
     4681 atcggcaatg tggcagataa ccctgtgggt aacggcttaa ttaaattgga tttaccgttc
     4741 ttagattgga atcgggttaa aaataacgta aaaatttctg aaacggatta tgtgactgcc
     4801 cgtttaaact atgagcaaaa aattacctca gccttaaatg aaattgaccg ttattattac
     4861 agttatacgc agtcgagaag ctcgttaaaa atccttcaag ataccaatgc gaaaaataaa
     4921 cgtatcagtt catactataa aaaccgttat gaacaagggg tgtcggagtt ccgtgagtgg
     4981 attaccgcac tgaataccga gcttaattct cagttggcga ttttaaatgc aaaatatgc
//
